# terms

id: GO:0031402
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a sodium ion (Na+).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkali metal ion binding","termid":"GO:0031420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0046872"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0046872"],"is_obsolete":false,"name":"sodium ion binding","synonyms":[{"name":"Na+ ion binding","type":"exact"}],"termid":"GO:0031402"}


id: GO:0050189
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + phosphoenolpyruvate = phosphate + pyruvate.","definition_xrefs":["RHEA:19997","EC:3.1.3.60"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"phosphoenolpyruvate phosphatase activity","secondary_identifiers":["MetaCyc:PHOSPHOENOLPYRUVATE-PHOSPHATASE-RXN","KEGG_REACTION:R00208"],"synonyms":[{"name":"PEP phosphatase activity","type":"related"},{"name":"phosphoenolpyruvate phosphohydrolase activity","type":"related"}],"termid":"GO:0050189"}


id: MONDO:0019559
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chronic cutaneous lupus erythematosus","termid":"MONDO:0015574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"hypertrophic or verrucous lupus erythematosus","secondary_identifiers":["GARD:19132","MEDGEN:698156","UMLS:C1274838","Orphanet:90282"],"termid":"MONDO:0019559","xrefs":{"Monarch":{"xref_id":"0019559"}}}


id: MONDO:0005470
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Drastic decline in blood pressure which happens after eating a meal and most likely due to insufficient compensation in cardiac output by the autonomic nervous system for the diversion of blood to the intestines.","definition_xrefs":["EFO:0005253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypotensive disorder","termid":"MONDO:0005468"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"postprandial hypotension","termid":"MONDO:0005470","xrefs":{"Monarch":{"xref_id":"0005470"}}}


id: MONDO:0005872
data:
  {"annotated_genes":["SJAG_00260","SJAG_03677","SJAG_05313","SJAG_01671","SJAG_04755","SJAG_01895"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88982],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014937"},{"annotations":[88833],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011121"},{"annotations":[87415],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007273"},{"annotations":[87625],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013602"},{"annotations":[89142,89141],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013224"}]},"cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm involving the nervous system.","definition_xrefs":["NCIT:C4788"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cancer","termid":"MONDO:0004992"},{"relation_name":"is_a","term_name":"nervous system neoplasm","termid":"MONDO:0021248"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_01671":null,"SJAG_01895":null,"SJAG_03677":null,"SJAG_04755":null,"SJAG_05313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"nervous system cancer","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:192","ICD9:192.9","EFO:0007392","MESH:D009423","MEDGEN:99231","SCTID:372063002","UMLS:C0497549","ICD9:192.8","DOID:3093"],"synonyms":[{"name":"cancer of nervous system","type":"exact"},{"name":"malignant neoplasm of nervous system","type":"exact"},{"name":"malignant neoplasm of the nervous system","type":"exact"},{"name":"malignant nervous system neoplasm","type":"exact"},{"name":"malignant nervous system tumor","type":"exact"},{"name":"malignant nervous system tumour","type":"exact"},{"name":"malignant tumor of nervous system","type":"exact"},{"name":"malignant tumor of the nervous system","type":"exact"},{"name":"malignant tumour of nervous system","type":"exact"},{"name":"malignant tumour of the nervous system","type":"exact"},{"name":"nervous system cancer","type":"exact"},{"name":"nervous system neoplasm","type":"broad"},{"name":"nervous system neoplasms, malignant","type":"exact"},{"name":"neural neoplasm","type":"broad"},{"name":"neural tumor","type":"broad"},{"name":"neural tumour","type":"broad"},{"name":"tumor of the nervous system","type":"broad"},{"name":"tumour of the nervous system","type":"broad"}],"termid":"MONDO:0005872","terms_by_termid":{"MONDO:0007273":null,"MONDO:0011121":null,"MONDO:0013224":null,"MONDO:0013602":null,"MONDO:0014937":null},"xrefs":{"Monarch":{"xref_id":"0005872"}}}


id: PBO:0029310
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_sodium_butyrate","termid":"PBO:0029310"}


id: GO:0051052
data:
  {"annotated_genes":["SJAG_04457","SJAG_03097","SJAG_00369","SJAG_03957","SJAG_03219","SJAG_02724","SJAG_04671","SJAG_01584","SJAG_03048","SJAG_00266","SJAG_02592","SJAG_00247","SJAG_03720","SJAG_00995","SJAG_04205","SJAG_03695","SJAG_03438","SJAG_01210","SJAG_03300","SJAG_03624","SJAG_00823","SJAG_02822","SJAG_03997","SJAG_04855","SJAG_02162","SJAG_02104","SJAG_00364","SJAG_02058","SJAG_00100","SJAG_03160","SJAG_01401","SJAG_02214","SJAG_01205","SJAG_01677","SJAG_00573","SJAG_03699","SJAG_03417","SJAG_02194","SJAG_01068"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109808],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010846"},{"annotations":[104187],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001033"},{"annotations":[113614],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904332"},{"annotations":[118711],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903464"},{"annotations":[99588,104191,110737],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903467"},{"annotations":[109811],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045128"},{"annotations":[113892,119143],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045739"},{"annotations":[119144,113893],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903468"},{"annotations":[112031,95697],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000781"},{"annotations":[112778],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905168"},{"annotations":[109244],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001034"},{"annotations":[118094,104197,108455,90875],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904514"},{"annotations":[104200,110201],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905263"},{"annotations":[97562],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090297"},{"annotations":[104201],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903465"},{"annotations":[81117],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045951"},{"annotations":[118278,107963,90813],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120292"},{"annotations":[90876],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010845"},{"annotations":[98998],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032215"},{"annotations":[110925,112174],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000018"},{"annotations":[74367,92723],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000779"},{"annotations":[111164],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010569"},{"annotations":[118147,90984,96190,118940,103444],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010520"},{"annotations":[105050],"is_not":false,"rel_names":["is_a","regulates"],"summary":null,"term":"GO:1902681"},{"annotations":[78795],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032210"},{"annotations":[110356,108469,101176,105051],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0011000"},{"annotations":[101177,104097,116886],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031582"},{"annotations":[101178],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090001"},{"annotations":[104098],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071807"},{"annotations":[118095],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062209"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving DNA.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleobase-containing compound metabolic process","termid":"GO:0019219"},{"relation_name":"is_a","term_name":"regulation of macromolecule metabolic process","termid":"GO:0060255"},{"relation_name":"regulates","term_name":"DNA metabolic process","termid":"GO:0006259"}],"gene_count":39,"genes_by_uniquename":{"SJAG_00100":null,"SJAG_00247":null,"SJAG_00266":null,"SJAG_00364":null,"SJAG_00369":null,"SJAG_00573":null,"SJAG_00823":null,"SJAG_00995":null,"SJAG_01068":null,"SJAG_01205":null,"SJAG_01210":null,"SJAG_01401":null,"SJAG_01584":null,"SJAG_01677":null,"SJAG_02058":null,"SJAG_02104":null,"SJAG_02162":null,"SJAG_02194":null,"SJAG_02214":null,"SJAG_02592":null,"SJAG_02724":null,"SJAG_02822":null,"SJAG_03048":null,"SJAG_03097":null,"SJAG_03160":null,"SJAG_03219":null,"SJAG_03300":null,"SJAG_03417":null,"SJAG_03438":null,"SJAG_03624":null,"SJAG_03695":null,"SJAG_03699":null,"SJAG_03720":null,"SJAG_03957":null,"SJAG_03997":null,"SJAG_04205":null,"SJAG_04457":null,"SJAG_04671":null,"SJAG_04855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"regulation of DNA metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of DNA metabolism","type":"exact"}],"termid":"GO:0051052","terms_by_termid":{"GO:0000018":null,"GO:0010520":null,"GO:0010569":null,"GO:0010845":null,"GO:0010846":null,"GO:0011000":null,"GO:0031582":null,"GO:0032210":null,"GO:0032215":null,"GO:0045128":null,"GO:0045739":null,"GO:0045951":null,"GO:0062209":null,"GO:0071807":null,"GO:0090001":null,"GO:0090297":null,"GO:0120292":null,"GO:1902681":null,"GO:1903464":null,"GO:1903465":null,"GO:1903467":null,"GO:1903468":null,"GO:1904332":null,"GO:1904514":null,"GO:1905168":null,"GO:1905263":null,"GO:2000779":null,"GO:2000781":null,"GO:2001033":null,"GO:2001034":null}}


id: MONDO:0011820
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scoliosis, isolated, susceptibility to, 2","secondary_identifiers":["OMIM:607354","UMLS:C1846366","MEDGEN:375871"],"synonyms":[{"name":"IS2","type":"exact"},{"name":"scoliosis, idiopathic 2","type":"exact"},{"name":"scoliosis, isolated, susceptibility to, 2","type":"exact"}],"termid":"MONDO:0011820","xrefs":{"Monarch":{"xref_id":"0011820"}}}


id: PBO:0088090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-glucose:sterol glucosyltransferase; conserved enzyme involved in synthesis of sterol glucoside membrane lipids; in contrast to ATG26 from P. pastoris, S. cerevisiae ATG26 is not involved in autophagy","termid":"PBO:0088090"}


id: GO:1905539
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of postsynapse to nucleus signaling pathway.","definition_xrefs":["ISBN:9780071120005","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"postsynapse to nucleus signaling pathway","termid":"GO:0099527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of postsynapse to nucleus signaling pathway","synonyms":[{"name":"regulation of postsynaptic signaling to nucleus","type":"exact"}],"termid":"GO:1905539"}


id: PBO:0062578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily G member 2","termid":"PBO:0062578"}


id: GO:0140961
data:
  {"annotated_genes":["SJAG_01351","SJAG_00988","SJAG_03497","SJAG_02599","SJAG_01344","SJAG_04516"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98826,98864,72591,95119,110270,120073],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098849"}]},"cv_name":"biological_process","definition":"Any process carried out at the cellular level that reduces or removes the toxicity of a metal ion.","definition_xrefs":["PMID:34442707","PMID:26729300","PMID:33046888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detoxification of inorganic compound","termid":"GO:0061687"},{"relation_name":"is_a","term_name":"cellular detoxification","termid":"GO:1990748"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00988":null,"SJAG_01344":null,"SJAG_01351":null,"SJAG_02599":null,"SJAG_03497":null,"SJAG_04516":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0098754","GO:0008150"],"is_obsolete":false,"name":"cellular detoxification of metal ion","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cellular detoxification of metal cation","type":"exact"}],"termid":"GO:0140961","terms_by_termid":{"GO:0098849":null}}


id: PBO:0011970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DYRK family protein kinase Pom2","termid":"PBO:0011970"}


id: FYPO:0006790
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A biological process phenotype in which meiotic drive occurs to a lower extent than normal, or does not occur at all, despite the presence of a gene or allele that normally causes drive. Meiotic drive results in the unequal transmission of alleles, haplotypes, or chromosomes from a parental genome to such that are unequally represented (i.e. the \\\"driver\\\" is overrepresented) among the surviving products of meiosis.","definition_xrefs":["PomBase:mah","PMID:30475921"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal biological process","termid":"FYPO:0005447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"meiotic drive suppression","synonyms":[{"name":"abolished meiotic drive","type":"related"},{"name":"decreased meiotic drive","type":"related"},{"name":"suppression of meiotic drive","type":"exact"}],"termid":"FYPO:0006790"}


id: PBO:0089127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S14","termid":"PBO:0089127"}


id: PBO:0080638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WDR86 antisense RNA 1","termid":"PBO:0080638"}


id: PBO:0053093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late cornified envelope 3A","termid":"PBO:0053093"}


id: GO:0003821
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete class II major histocompatibility complex antigen (obsolete GO:0003821)","synonyms":[{"name":"class II major histocompatibility complex antigen","type":"exact"}],"termid":"GO:0003821"}


id: PBO:0053896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1181","termid":"PBO:0053896"}


id: GO:0039639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The prevention or delay of host cell lysis by a pre-existing virus in response to a subsequent infection of the host cell by second virus.","definition_xrefs":["GOC:bm","PMID:9560373","GOC:jl","PMID:22389108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"suppression by virus of host cell lysis in response to superinfection","synonyms":[{"name":"lysis inhibition","type":"broad"},{"name":"suppression by virus of host cell lysis in response to superinfecting virus","type":"exact"}],"termid":"GO:0039639"}


id: PBO:0052638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 6","termid":"PBO:0052638"}


id: PBO:0058127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4429","termid":"PBO:0058127"}


id: PBO:0055745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA bladder and prostate cancer suppressor, hnRNPK interacting","termid":"PBO:0055745"}


id: GO:1904558
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a dextromethorphan stimulus.","definition_xrefs":["PMID:25796330","GOC:mr","GOC:TermGenie","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to isoquinoline alkaloid","termid":"GO:0014072"},{"relation_name":"is_a","term_name":"response to ether","termid":"GO:0045472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to dextromethorphan","termid":"GO:1904558"}


id: GO:1900613
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of F-9775B.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"polyketide catabolic process","termid":"GO:0030640"},{"relation_name":"is_a","term_name":"F-9775B metabolic process","termid":"GO:1900612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"F-9775B catabolic process","synonyms":[{"name":"F-9775B breakdown","type":"exact"},{"name":"F-9775B catabolism","type":"exact"},{"name":"F-9775B degradation","type":"exact"}],"termid":"GO:1900613"}


id: GO:0010095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a floral organ primordium acquires petal identity. Identity is considered to be the aggregate of characteristics by which a structure is recognized.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of floral organ identity","termid":"GO:0010093"},{"relation_name":"part_of","term_name":"petal formation","termid":"GO:0048451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of petal identity","termid":"GO:0010095"}


id: MONDO:0010390
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ocular albinism with late-onset sensorineural deafness (OASD), is a rare, X-linked inherited type of ocular albinism described in one African kindred (7 males over 3 generations) to date, characterized by severe visual impairment, translucent pale-blue iridies, a reduction in the retinal pigment and moderately severe deafness by middle age (fourth to fifth decade of life). It is unclear whether it is allelic to X-linked recessive ocular albinism or a contiguous gene syndrome.","definition_xrefs":["Orphanet:1000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ocular albinism","termid":"MONDO:0017304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"ocular albinism with late-onset sensorineural deafness","secondary_identifiers":["OMIM:300650","MEDGEN:337149","SCTID:722054007","UMLS:C1845069","GARD:592"],"synonyms":[{"name":"OASD","type":"related"},{"name":"albinism ocular late onset sensorineural deafness","type":"related"},{"name":"albinism, ocular, with late-onset sensorineural deafness","type":"related"},{"name":"deafness and ocular albinism","type":"related"},{"name":"ocular albinism with sensorineural deafness","type":"related"}],"termid":"MONDO:0010390","xrefs":{"Monarch":{"xref_id":"0010390"}}}


id: FYECO:0000152
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which mannose was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ mannose","termid":"FYECO:0000152"}


id: FYPO:0003609
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of dehydrodolichyl diphosphate synthase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal dehydrodolichyl diphosphate synthase activity","termid":"FYPO:0003608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0001985","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"decreased dehydrodolichyl diphosphate synthase activity","synonyms":[{"name":"reduced dehydrodolichyl diphosphate synthase activity","type":"exact"}],"termid":"FYPO:0003609"}


id: GO:0032045
data:
  {"annotated_genes":["SJAG_01032","SJAG_06588","SJAG_03928","SJAG_02471","SJAG_00143","SJAG_01659","SJAG_00688","SJAG_01367","SJAG_01576","SJAG_02307","SJAG_03089","SJAG_03678"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[75660,79193,78934,73655,74231],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005851"},{"annotations":[92813],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035658"},{"annotations":[106962,109685,94708,95864],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071986"},{"annotations":[79011,77534],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034066"}]},"cv_name":"cellular_component","definition":"A protein complex that stimulates the exchange of guanyl nucleotides associated with a GTPase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00143":null,"SJAG_00688":null,"SJAG_01032":null,"SJAG_01367":null,"SJAG_01576":null,"SJAG_01659":null,"SJAG_02307":null,"SJAG_02471":null,"SJAG_03089":null,"SJAG_03678":null,"SJAG_03928":null,"SJAG_06588":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"guanyl-nucleotide exchange factor complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"guanine nucleotide exchange factor","type":"related"}],"termid":"GO:0032045","terms_by_termid":{"GO:0005851":null,"GO:0034066":null,"GO:0035658":null,"GO:0071986":null}}


id: FYPO:0000587
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which ascospore formation begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal sporulation","termid":"FYPO:0000121"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0000121"],"is_obsolete":false,"name":"delayed onset of sporulation","synonyms":[{"name":"delayed onset of ascospore formation","type":"exact"},{"name":"delayed sporulation","type":"exact"},{"name":"sporulation: delayed","type":"related"}],"termid":"FYPO:0000587"}


id: PR:000028934
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peroxiredoxin tpx1 reduced form in Schizosaccharomyces pombe.","definition_xrefs":["PRO:CNA","PMID:22245228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxiredoxin tpx1","termid":"PR:000028932"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tpx1/Red+","pombase_gene_id":"SPCC576.03c","synonyms":[{"name":"PomBase_original_PRO_term_name: peroxiredoxin tpx1 reduced form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-tpx1/Red+","type":"exact"},{"name":"tpx1/Red+","type":"exact"}],"termid":"PR:000028934"}


id: MONDO:0014661
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A basal subtype of epidermolysis bullosa simplex (EBS) characterized by generalized skin blistering associated with severe nail dystrophy.","definition_xrefs":["OMIM:616487"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa simplex","termid":"MONDO:0017610"},{"relation_name":"is_a","term_name":"PLEC-related muscular dystrophy-epidermolysis bullosa simplex spectrum disorder","termid":"MONDO:1060109"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"epidermolysis bullosa simplex with nail dystrophy","secondary_identifiers":["UMLS:C4225309","MEDGEN:906476"],"synonyms":[{"name":"EBSND","type":"related"},{"name":"epidermolysis bullosa simplex 5D, generalised intermediate, autosomal recessive","type":"exact"},{"name":"epidermolysis bullosa simplex 5D, generalized intermediate, autosomal recessive","type":"exact"},{"name":"epidermolysis bullosa simplex with nail dystrophy","type":"exact"}],"termid":"MONDO:0014661","xrefs":{"Monarch":{"xref_id":"0014661"}}}


id: PBO:0062708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily G member 2","termid":"PBO:0062708"}


id: MONDO:0014902
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any nasopharyngeal carcinoma in which the cause of the disease is a mutation in the MST1R gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nasopharyngeal carcinoma, susceptibility to, 3","secondary_identifiers":["UMLS:C4310729","MEDGEN:934696","OMIM:617075"],"synonyms":[{"name":"MST1R nasopharyngeal carcinoma","type":"exact"},{"name":"NPCA3","type":"exact"},{"name":"nasopharyngeal carcinoma caused by mutation in MST1R","type":"exact"},{"name":"nasopharyngeal carcinoma, susceptibility to, 3","type":"exact"},{"name":"nasopharyngeal carcinoma, susceptibility to, 3; NPCA3","type":"exact"},{"name":"nasopharyngeal carcinoma, susceptibility to, type 3","type":"exact"},{"name":"susceptibility to nasopharyngeal carcinoma 3","type":"related"}],"termid":"MONDO:0014902","xrefs":{"Monarch":{"xref_id":"0014902"}}}


id: PBO:0074348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 7","termid":"PBO:0074348"}


id: PBO:0004012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoketolase family protein (predicted)","termid":"PBO:0004012"}


id: MOD:00198
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-alanine residue to D-alanine.","definition_xrefs":["PubMed:15023056","RESID:AA0191#ALA","PubMed:7287302","PubMed:7961627"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at 71.037114 Da","termid":"MOD:00570"},{"relation_name":"is_a","term_name":"D-alanine","termid":"MOD:00862"},{"relation_name":"is_a","term_name":"modified L-alanine residue","termid":"MOD:00901"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-alanine (Ala)","synonyms":[{"name":"(R)-2-aminopropanoic acid","type":"exact"},{"name":"D-Ala(Ala)","type":"exact"},{"name":"D-alanine","type":"exact"},{"name":"MOD_RES D-alanine (Ala)","type":"exact"}],"termid":"MOD:00198"}


id: PBO:0048269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide N-acetylgalactosaminyltransferase 7","termid":"PBO:0048269"}


id: MONDO:0010525
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"isolated spina bifida","termid":"MONDO:0019351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"neural tube defects, X-linked","secondary_identifiers":["MESH:C536359","MEDGEN:337140","GARD:669","OMIM:301410","UMLS:C1845026"],"synonyms":[{"name":"X-linked anencephaly/spina bifida","type":"related"},{"name":"anencephaly and spina bifida X-linked","type":"related"},{"name":"neural tube defects, X-linked","type":"exact"},{"name":"spina bifida, X-linked","type":"related"}],"termid":"MONDO:0010525","xrefs":{"Monarch":{"xref_id":"0010525"}}}


id: MONDO:0030134
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"oculopharyngodistal myopathy","termid":"MONDO:0025193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"oculopharyngodistal myopathy 2","secondary_identifiers":["DOID:0081298","MEDGEN:1718769","OMIM:618940","GARD:16397","UMLS:C5394548"],"synonyms":[{"name":"OCULOPHARYNGODISTAL MYOPATHY 2","type":"exact"},{"name":"OPDM2","type":"exact"},{"name":"oculopharyngodistal myopathy 2","type":"exact"}],"termid":"MONDO:0030134","xrefs":{"Monarch":{"xref_id":"0030134"}}}


id: GO:0004525
data:
  {"annotated_genes":["SJAG_04019","SJAG_03689","SJAG_01463","SJAG_04527","SJAG_02156"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[60095,61001,69241,75293,78435],"is_not":false,"summary":null,"term":"GO:0004525"}]},"cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage of RNA with 5'-phosphomonoesters and 3'-OH termini; makes two staggered cuts in both strands of dsRNA, leaving a 3' overhang of 2 nt.","definition_xrefs":["PMID:11157775","PMID:15242644"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA endonuclease activity producing 5'-phosphomonoesters, hydrolytic mechanism","termid":"GO:0016891"},{"relation_name":"is_a","term_name":"double-stranded RNA-specific ribonuclease activity","termid":"GO:0032296"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01463":null,"SJAG_02156":null,"SJAG_03689":null,"SJAG_04019":null,"SJAG_04527":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0140098","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"ribonuclease III activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:3.1.26.3-RXN","Reactome:R-HSA-9708408","EC:3.1.26.3","Reactome:R-HSA-426464","Reactome:R-HSA-203862","Reactome:R-HSA-9820840","Reactome:R-HSA-203893","Reactome:R-HSA-9708292"],"synonyms":[{"name":"RNase III activity","type":"related"},{"name":"pre-mRNA 3'-end processing endonuclease","type":"narrow"},{"name":"ribonuclease 3 activity","type":"related"}],"termid":"GO:0004525","terms_by_termid":{"GO:0004525":null}}


id: MOD:02057
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-tryptophan residue crosslinked to one or more amino acid residues.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslinked L-tryptophan residue","synonyms":[{"name":"XlnkTrp","type":"exact"}],"termid":"MOD:02057"}


id: MONDO:0004604
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A subtype of classical Hodgkin lymphoma with scattered Hodgkin and Reed-Sternberg cells and a nodular or less often diffuse cellular background consisting of small lymphocytes and with an absence of neutrophils and eosinophils. (WHO, 2008)","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"classic Hodgkin lymphoma","termid":"MONDO:0009348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"Hodgkin's lymphoma, lymphocytic-histiocytic predominance","secondary_identifiers":["Orphanet:98845","SCTID:118607005","GARD:19593","MedDRA:10020231","DOID:8543","MEDGEN:224769","UMLS:C1266194","icd11.foundation:352299041","NCIT:C6913","ICD9:201.4","ICDO:9651/3","ONCOTREE:LRCHL"],"synonyms":[{"name":"Hodgkin lymphoma, lymphocyte-rich","type":"exact"},{"name":"Hodgkin lymphoma, lymphocytic-histiocytic predominance","type":"exact"},{"name":"Hodgkin's disease, lymphocyte predominance","type":"exact"},{"name":"Hodgkin's disease, lymphocyte predominance [obs]","type":"exact"},{"name":"LRCHL","type":"exact"},{"name":"classic Hodgkin lymphoma, lymphocyte-rich type","type":"exact"},{"name":"lymphocyte rich Hodgkin lymphoma","type":"exact"},{"name":"lymphocyte rich Hodgkin's disease","type":"exact"},{"name":"lymphocyte rich Hodgkin's lymphoma","type":"exact"},{"name":"lymphocyte rich classical Hodgkin lymphoma","type":"exact"},{"name":"lymphocyte rich classical Hodgkin's disease","type":"exact"},{"name":"lymphocyte rich classical Hodgkin's lymphoma","type":"exact"},{"name":"lymphocyte-rich Classic Hodgkin lymphoma","type":"exact"},{"name":"lymphocyte-rich classical Hodgkin lymphoma","type":"exact"},{"name":"lymphocyte-rich classical Hodgkin's lymphoma","type":"exact"}],"termid":"MONDO:0004604","xrefs":{"Monarch":{"xref_id":"0004604"}}}


id: GO:0070802
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of metula development, a process that leads to the formation of metulae. Metulae are elongated mononucleate cells that bud from the surface of the conidiophore tip.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell development","termid":"GO:0060284"},{"relation_name":"is_a","term_name":"regulation of conidiophore development","termid":"GO:0070793"},{"relation_name":"regulates","term_name":"metula development","termid":"GO:0070789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of metula development","termid":"GO:0070802"}


id: PBO:0041765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calpain 5","termid":"PBO:0041765"}


id: GO:0048391
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the intermediate mesoderm. This process pertains to the initial formation of the structure from unspecified parts.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesoderm formation","termid":"GO:0001707"},{"relation_name":"part_of","term_name":"intermediate mesoderm morphogenesis","termid":"GO:0048390"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intermediate mesoderm formation","secondary_identifiers":["Reactome:R-HSA-9761174"],"termid":"GO:0048391"}


id: PATO:0000504
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A rhythm quality inhering in a bearer by virtue of the bearer's lacking rhythm.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhythm quality","termid":"PATO:0000078"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrhythmic","termid":"PATO:0000504"}


id: PBO:0034265
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_biological_homology_relationship_with","termid":"PBO:0034265"}


id: MONDO:0000592
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A developmental disorder of mental health that categorizes specific learning disabilities and developmental disorders affecting coordination.","definition_xrefs":["DOID:0060038"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental disorder of mental health","termid":"MONDO:0005503"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"specific developmental disorder","secondary_identifiers":["ICD9:315.8","SCTID:10720004","MEDGEN:508157","UMLS:C0037785"],"synonyms":[{"name":"specific delays in development","type":"related"},{"name":"specific developmental disorder","type":"exact"}],"termid":"MONDO:0000592","xrefs":{"Monarch":{"xref_id":"0000592"}}}


id: MONDO:0013414
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the RGR gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"retinitis pigmentosa 44","secondary_identifiers":["MEDGEN:462418","GARD:15705","OMIM:613769","UMLS:C3151068","DOID:0110394","ICD10CM:H35.5"],"synonyms":[{"name":"RGR retinitis pigmentosa","type":"exact"},{"name":"RP44","type":"exact"},{"name":"retinitis pigmentosa 44","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in RGR","type":"exact"},{"name":"retinitis pigmentosa type 44","type":"exact"}],"termid":"MONDO:0013414","xrefs":{"Monarch":{"xref_id":"0013414"}}}


id: PBO:0051747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrator complex subunit 13","termid":"PBO:0051747"}


id: PBO:0080190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vascular endothelial growth factor C","termid":"PBO:0080190"}


id: PBO:0052723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 15","termid":"PBO:0052723"}


id: PBO:0034097
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_preventative_for_condition","termid":"PBO:0034097"}


id: MONDO:0005110
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease of the heart muscle or myocardium proper whose cause is unknown.","definition_xrefs":["NCIT:C53654"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiomyopathy","termid":"MONDO:0004994"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"idiopathic cardiomyopathy","secondary_identifiers":["MEDGEN:18634","EFO:0000767","UMLS:C0033141"],"termid":"MONDO:0005110","xrefs":{"Monarch":{"xref_id":"0005110"}}}


id: MOD:00477
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts, by oxidative decarboxylation, an L-proline residue to 2-pyrrolidone with breakage of the peptide chain.","definition_xrefs":["PubMed:2161657","Unimod:360#P","PubMed:9252331"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dehydrogenated residue","termid":"MOD:00683"},{"relation_name":"is_a","term_name":"modified L-proline residue","termid":"MOD:00915"},{"relation_name":"is_a","term_name":"decarboxylated residue","termid":"MOD:00960"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-pyrrolidone","synonyms":[{"name":"Pro->Pyrrolidinone","type":"related"},{"name":"Proline oxidation to pyrrolidinone","type":"related"}],"termid":"MOD:00477"}


id: PBO:0039703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aprataxin and PNKP like factor","termid":"PBO:0039703"}


id: PBO:0003432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin type I","termid":"PBO:0003432"}


id: GO:0090613
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5'deoxyadenosine + H2O = 5'deoxyinosine + NH3.","definition_xrefs":["PMID:23968233","RHEA:42892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016810"],"is_obsolete":false,"name":"5'-deoxyadenosine deaminase activity","secondary_identifiers":["EC:3.5.4.41"],"termid":"GO:0090613"}


id: PBO:0036097
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_trimethylation_at_subtelomere_during_vegetative_growth","termid":"PBO:0036097"}


id: PBO:0057509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 627","termid":"PBO:0057509"}


id: PBO:0054238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1620","termid":"PBO:0054238"}


id: PBO:0011450
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"merged with ncRNA SPNCRNA.55","termid":"PBO:0011450"}


id: PBO:0028574
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_arginine_import","termid":"PBO:0028574"}


id: SO:0001327
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"2prime_O_methylguanosine is a modified guanosine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_guanosine","termid":"SO:0001276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"two_prime_O_methylguanosine","secondary_identifiers":["RNAMOD:032"],"synonyms":[{"name":"2'-O-methylguanosine","type":"exact"},{"name":"Gm","type":"exact"},{"name":"two prime O methylguanosine","type":"exact"}],"termid":"SO:0001327"}


id: PBO:0057391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548d-2","termid":"PBO:0057391"}


id: PBO:0050201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 18","termid":"PBO:0050201"}


id: PR:O60061
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A dolichyl-phosphate beta-glucosyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10859:SF42","OMA:SCHPO03989","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-phosphate beta-glucosyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC56F2.10c","secondary_identifiers":["UniProtKB:O60061"],"synonyms":[{"name":"DolP-glucosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ALG5","type":"exact"},{"name":"asparagine-linked glycosylation protein 5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60061"}


id: PBO:0090656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASTRA/Swr1/Ino80 complex AAA family ATPase Rvb1","termid":"PBO:0090656"}


id: PBO:0044216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cortactin binding protein 2","termid":"PBO:0044216"}


id: MONDO:0016095
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant mesenchymal neoplasm with skeletal muscle differentiation arising from the vagina.","definition_xrefs":["NCIT:C128080"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vagina sarcoma","termid":"MONDO:0002140"},{"relation_name":"is_a","term_name":"rhabdomyosarcoma","termid":"MONDO:0005212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"vaginal rhabdomyosarcoma","secondary_identifiers":["GARD:20348","SCTID:766759009","Orphanet:206492","MEDGEN:925567","UMLS:C4288035"],"synonyms":[{"name":"rhabdomyosarcoma (disease) of vagina","type":"exact"},{"name":"vagina rhabdomyosarcoma","type":"exact"},{"name":"vagina rhabdomyosarcoma (disease)","type":"exact"},{"name":"vaginal rhabdomyosarcoma","type":"exact"},{"name":"vulvovaginal rhabdomyosarcoma","type":"related"}],"termid":"MONDO:0016095","xrefs":{"Monarch":{"xref_id":"0016095"}}}


id: PBO:0050953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon gamma","termid":"PBO:0050953"}


id: PBO:0040161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"agouti signaling protein","termid":"PBO:0040161"}


id: MONDO:0700008
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosomal disorder in which chromosome 1 is affected.","definition_xrefs":["MONDO:patterns/chromosome_type"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal anomaly","termid":"MONDO:0020049"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 disorder","termid":"MONDO:0700008","xrefs":{"Monarch":{"xref_id":"0700008"}}}


id: PBO:0028460
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_galactose-specific_flocculation","termid":"PBO:0028460"}


id: PBO:0077098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of inner mitochondrial membrane 8A pseudogene 1","termid":"PBO:0077098"}


id: PBO:0005110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle subunit (predicted)","termid":"PBO:0005110"}


id: PBO:0082805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of U2 snRNP complex; disruption causes reduced U2 snRNP levels; physically interacts with Msl1p; putative homolog of human U2A' snRNP protein","termid":"PBO:0082805"}


id: PBO:0065775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quinolinate phosphoribosyltransferase","termid":"PBO:0065775"}


id: GO:0002627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of T cell antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antigen processing and presentation","termid":"GO:0002579"},{"relation_name":"is_a","term_name":"regulation of T cell antigen processing and presentation","termid":"GO:0002625"},{"relation_name":"is_a","term_name":"positive regulation of T cell mediated immunity","termid":"GO:0002711"},{"relation_name":"positively_regulates","term_name":"T cell antigen processing and presentation","termid":"GO:0002457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of T cell antigen processing and presentation","synonyms":[{"name":"activation of T cell antigen processing and presentation","type":"narrow"},{"name":"positive regulation of T lymphocyte antigen processing and presentation","type":"exact"},{"name":"positive regulation of T-cell antigen processing and presentation","type":"exact"},{"name":"positive regulation of T-lymphocyte antigen processing and presentation","type":"exact"},{"name":"stimulation of T cell antigen processing and presentation","type":"narrow"},{"name":"up regulation of T cell antigen processing and presentation","type":"exact"},{"name":"up-regulation of T cell antigen processing and presentation","type":"exact"},{"name":"upregulation of T cell antigen processing and presentation","type":"exact"}],"termid":"GO:0002627"}


id: PBO:0086159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for proteasome assembly during quiescence; binds to base of the proteasome regulartory particle; required for survival at high temperature during stationary phase; not required for growth on nonfermentable carbon sources","termid":"PBO:0086159"}


id: GO:0005013
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete neurotrophin TRK receptor activity (obsolete GO:0005013)","synonyms":[{"name":"neurotrophin TRK receptor activity","type":"exact"}],"termid":"GO:0005013"}


id: GO:1900813
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving monodictyphenone.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"},{"relation_name":"is_a","term_name":"ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"monodictyphenone metabolic process","synonyms":[{"name":"monodictyphenone metabolism","type":"exact"}],"termid":"GO:1900813"}


id: GO:0034605
data:
  {"annotated_genes":["SJAG_03527","SJAG_01186","SJAG_04388","SJAG_04055","SJAG_00436","SJAG_04567","SJAG_01584","SJAG_03815","SJAG_04187"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97505,106829,111851,111852,117362,117363],"is_not":false,"summary":null,"term":"GO:0034605"},{"annotations":[106142,80758],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070370"},{"annotations":[74922],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031990"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to heat","termid":"GO:0009408"},{"relation_name":"is_a","term_name":"cellular response to stress","termid":"GO:0033554"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00436":null,"SJAG_01186":null,"SJAG_01584":null,"SJAG_03527":null,"SJAG_03815":null,"SJAG_04055":null,"SJAG_04187":null,"SJAG_04388":null,"SJAG_04567":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to heat","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-3371556"],"synonyms":[{"name":"cellular response to heat stress","type":"exact"}],"termid":"GO:0034605","terms_by_termid":{"GO:0031990":null,"GO:0034605":null,"GO:0070370":null}}


id: MONDO:0042600
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sammartino-Decreccio syndrome","secondary_identifiers":["MEDGEN:419806","UMLS:C2931447"],"synonyms":[{"name":"Sammartino Decreccio syndrome","type":"related"},{"name":"superficial annular corneal dystrophy, ichthyosis nigrans, microcephaly and mild mental subnormality","type":"related"}],"termid":"MONDO:0042600","xrefs":{"Monarch":{"xref_id":"0042600"}}}


id: PBO:0005486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element Wtf12","termid":"PBO:0005486"}


id: GO:0062243
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The outer of the two endoplasmic reticulum-derived lipid bilayer membranes that bound a double membrane vesicle viral factory.","definition_xrefs":["PMID:22440839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"double membrane vesicle viral factory membrane","termid":"GO:0062242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"double membrane vesicle viral factory outer membrane","synonyms":[{"name":"outer membrane of double membrane vesicle viral factory","type":"exact"}],"termid":"GO:0062243"}


id: PBO:0002933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerophosphoryl diester phosphodiesterase (predicted)","termid":"PBO:0002933"}


id: PBO:0088696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial PPR repeat protein","termid":"PBO:0088696"}


id: SO:0001983
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A 5' UTR variant where a premature start codon is introduced, moved or lost.","definition_xrefs":["SANGER:am"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5_prime_UTR_variant","termid":"SO:0001623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5_prime_UTR_premature_start_codon_variant","synonyms":[{"name":"5' UTR premature start codon variant","type":"exact"}],"termid":"SO:0001983"}


id: PBO:0081265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF32 antisense RNA 3","termid":"PBO:0081265"}


id: GO:0045863
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving pteridine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of pteridine metabolic process","termid":"GO:0042068"},{"relation_name":"negatively_regulates","term_name":"pteridine metabolic process","termid":"GO:0019889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of pteridine metabolic process","synonyms":[{"name":"down regulation of pteridine metabolic process","type":"exact"},{"name":"down-regulation of pteridine metabolic process","type":"exact"},{"name":"downregulation of pteridine metabolic process","type":"exact"},{"name":"inhibition of pteridine metabolic process","type":"narrow"},{"name":"negative regulation of pteridine metabolism","type":"exact"}],"termid":"GO:0045863"}


id: PBO:0074819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 18B","termid":"PBO:0074819"}


id: PR:Q09720
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proteasome subunit beta type-2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00153","PANTHER:PTHR11599:SF6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit beta type-4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31A2.04c","secondary_identifiers":["UniProtKB:Q09720"],"synonyms":[{"name":"Spom972h-PSMB2","type":"exact"}],"termid":"PR:Q09720"}


id: GO:0034004
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate + H2O = (1E,4S,5E,7R)-germacra-1(10),5-dien-11-ol + diphosphate.","definition_xrefs":["EC:4.2.3.22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"germacradienol synthase activity","secondary_identifiers":["RHEA:22436"],"synonyms":[{"name":"2-trans,6-trans-farnesyl-diphosphate diphosphate-lyase [(1E,4S,5E,7R)-germacra-1(10),5-dien-11-ol-forming] activity","type":"related"}],"termid":"GO:0034004"}


id: PBO:0083535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF VRP1/YLR337C","termid":"PBO:0083535"}


id: PBO:0076095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin 1B","termid":"PBO:0076095"}


id: PBO:0063883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class M","termid":"PBO:0063883"}


id: GO:0009663
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a plasmodesma, a fine cytoplasmic channel, found in all higher plants, that connects the cytoplasm of one cell to that of an adjacent cell.","definition_xrefs":["PMID:29880547","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction organization","termid":"GO:0045216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plasmodesma organization","synonyms":[{"name":"plasmodesma organisation","type":"exact"},{"name":"plasmodesma organization and biogenesis","type":"related"},{"name":"plasmodesmata organization and biogenesis","type":"related"}],"termid":"GO:0009663"}


id: GO:0004070
data:
  {"annotated_genes":["SJAG_00964"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73641],"is_not":false,"summary":null,"term":"GO:0004070"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-aspartate + carbamoyl phosphate = N-carbamoyl-L-aspartate + H+ + phosphate.","definition_xrefs":["EC:2.1.3.2","RHEA:20013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxyl- or carbamoyltransferase activity","termid":"GO:0016743"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00964":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"aspartate carbamoyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:ASPCARBTRANS-RXN","KEGG_REACTION:R01397","Reactome:R-HSA-73573"],"synonyms":[{"name":"ATCase activity","type":"related"},{"name":"L-aspartate transcarbamoylase activity","type":"related"},{"name":"L-aspartate transcarbamylase activity","type":"related"},{"name":"aspartate carbamyltransferase activity","type":"related"},{"name":"aspartate transcarbamoylase activity","type":"related"},{"name":"aspartate transcarbamylase activity","type":"related"},{"name":"aspartic acid transcarbamoylase activity","type":"related"},{"name":"aspartic carbamyltransferase activity","type":"related"},{"name":"aspartic transcarbamylase activity","type":"related"},{"name":"carbamoyl-phosphate:L-aspartate carbamoyltransferase activity","type":"related"},{"name":"carbamoylaspartotranskinase activity","type":"related"},{"name":"carbamylaspartotranskinase activity","type":"related"}],"termid":"GO:0004070","terms_by_termid":{"GO:0004070":null}}


id: MONDO:0015710
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete immune dysregulation disease with immunodeficiency (obsolete MONDO:0015710)","secondary_identifiers":["Orphanet:169361"],"termid":"MONDO:0015710","xrefs":{"Monarch":{"xref_id":"0015710"}}}


id: GO:0035707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a T-helper 2 cell in response to an external stimulus.","definition_xrefs":["CL:0000546","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell chemotaxis","termid":"GO:0010818"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T-helper 2 cell chemotaxis","synonyms":[{"name":"Th2 cell chemotaxis","type":"exact"}],"termid":"GO:0035707"}


id: PBO:0045167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member A1 pseudogene 1","termid":"PBO:0045167"}


id: SO:0002194
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The pseudogene has arisen from a copy of the parent gene by duplication followed by accumulation of random mutation. The changes, compared to their functional homolog, include insertions, deletions, premature stop codons, frameshifts and a higher proportion of non-synonymous versus synonymous substitutions.","direct_ancestors":[{"relation_name":"is_a","term_name":"pseudogenic_rRNA","termid":"SO:0000777"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unprocessed_pseudogenic_rRNA","synonyms":[{"name":"INSDC_feature:rRNA","type":"broad"},{"name":"INSDC_qualifier:unprocessed","type":"exact"},{"name":"unprocessed pseudogenic rRNA","type":"exact"}],"termid":"SO:0002194"}


id: GO:0031548
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of signaling via the brain-derived neurotrophic factor receptor signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"brain-derived neurotrophic factor receptor signaling pathway","termid":"GO:0031547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of brain-derived neurotrophic factor receptor signaling pathway","synonyms":[{"name":"regulation of BDNF receptor signaling pathway","type":"exact"},{"name":"regulation of BDNF receptor signalling pathway","type":"exact"},{"name":"regulation of brain-derived neurotrophic factor receptor signalling pathway","type":"exact"}],"termid":"GO:0031548"}


id: PBO:0003723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fructose-bisphosphate aldolase Fba1","termid":"PBO:0003723"}


id: FYPO:0006728
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the initiation of nuclear DNA replication does not occur at one or more origins.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic DNA replication initiation","termid":"FYPO:0001344"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000293","FYPO:0001320","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"abolished mitotic DNA replication initiation","synonyms":[{"name":"abolished mitotic DNA replication initiation during mitotic cell cycle","type":"related"},{"name":"abolished mitotic DNA replication initiation during vegetative growth","type":"exact"},{"name":"mitotic DNA replication initiation abolished","type":"exact"}],"termid":"FYPO:0006728"}


id: MONDO:0015753
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cap myopathy is a very rare congenital myopathy presenting a weakness of facial and respiratory muscles associated with craniofacial and thoracic deformities, as well as weakness of limb proximal and distal muscles. Onset is at birth or in childhood, weakness progression is slow but may lead to a severe and even fatal prognosis.","definition_xrefs":["Orphanet:171881"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-actinopathy","termid":"MONDO:0100084"},{"relation_name":"is_a","term_name":"TPM3-related myopathy","termid":"MONDO:0100108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"cap myopathy","secondary_identifiers":["GARD:11915","SCTID:703532002","UMLS:C3710589","MEDGEN:777197","MESH:C579969"],"synonyms":[{"name":"Cap disease","type":"exact"},{"name":"congenital myopathy with caps","type":"related"}],"termid":"MONDO:0015753","xrefs":{"Monarch":{"xref_id":"0015753"}}}


id: PBO:0031113
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_G1/S_phase_transcription","termid":"PBO:0031113"}


id: PBO:0060337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin VB pseudogene 2","termid":"PBO:0060337"}


id: PBO:0040612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAR/IMD domain containing adaptor protein 2 like 1","termid":"PBO:0040612"}


id: MONDO:0007106
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anal sphincter dysplasia","secondary_identifiers":["UMLS:C1862936","OMIM:105563","MEDGEN:350794","MESH:C538254"],"synonyms":[{"name":"ASDP","type":"related"},{"name":"anal sphincter dysplasia","type":"exact"}],"termid":"MONDO:0007106","xrefs":{"Monarch":{"xref_id":"0007106"}}}


id: PBO:0028503
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-unequal_mitotic_sister_chromatid_segregation","termid":"PBO:0028503"}


id: MONDO:0019572
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive cutis laxa, type 1 (ARCL1) is a generalized connective tissue disorder characterized by the association of wrinkled, redundant and sagging inelastic skin with severe systemic manifestations (lung atelectesias and emphysema, vascular anomalies, and gastrointestinal and genitourinary tract diverticuli).","definition_xrefs":["Orphanet:90349"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"vascular disorder","termid":"MONDO:0005385"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"inherited cutis laxa","termid":"MONDO:0100237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive cutis laxa type 1","secondary_identifiers":["UMLS:C0268351","GARD:8480","PMID:19401719","DOID:0070144","MEDGEN:78663","MESH:C536225","SCTID:254222002"],"synonyms":[{"name":"ARCL1","type":"exact"},{"name":"autosomal recessive cutis laxa type 1","type":"exact"},{"name":"autosomal recessive cutis laxa type I","type":"related"},{"name":"autosomal recessive cutis laxa with severe systemic involvement","type":"exact"},{"name":"autosomal recessive cutis laxa, pulmonary emphysema type","type":"exact"},{"name":"cutis laxa, autosomal recessive type 1","type":"related"},{"name":"cutis laxa, type 1","type":"related"}],"termid":"MONDO:0019572","xrefs":{"Monarch":{"xref_id":"0019572"}}}


id: PBO:0079046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon CAC) 2-1","termid":"PBO:0079046"}


id: PBO:0059697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 5","termid":"PBO:0059697"}


id: GO:0032658
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-15 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-15 production","termid":"GO:0032618"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of interleukin-15 production","secondary_identifiers":["GO:0045372"],"synonyms":[{"name":"regulation of IL-15 production","type":"exact"},{"name":"regulation of interleukin-15 biosynthetic process","type":"narrow"}],"termid":"GO:0032658"}


id: PBO:0042467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle associated 4 pseudogene 4","termid":"PBO:0042467"}


id: PBO:0078508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 2","termid":"PBO:0078508"}


id: GO:0016173
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Inhibits the formation of ice crystals.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete ice nucleation inhibitor activity (obsolete GO:0016173)","synonyms":[{"name":"ice nucleation inhibitor activity","type":"exact"}],"termid":"GO:0016173"}


id: PBO:0072360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 46","termid":"PBO:0072360"}


id: GO:0071480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gamma radiation stimulus. Gamma radiation is a form of electromagnetic radiation (EMR) or light emission of a specific frequency produced from sub-atomic particle interaction, such as electron-positron annihilation and radioactive decay. Gamma rays are generally characterized as EMR having the highest frequency and energy, and also the shortest wavelength, within the electromagnetic radiation spectrum.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to gamma radiation","termid":"GO:0010332"},{"relation_name":"is_a","term_name":"cellular response to ionizing radiation","termid":"GO:0071479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to gamma radiation","synonyms":[{"name":"cellular response to gamma ray","type":"related"},{"name":"cellular response to gamma-ray photon","type":"related"}],"termid":"GO:0071480"}


id: PBO:0072461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 25","termid":"PBO:0072461"}


id: GO:0030141
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell and upon stimulation, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory vesicle","termid":"GO:0099503"},{"relation_name":"part_of","term_name":"endomembrane system","termid":"GO:0012505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"secretory granule","synonyms":[{"name":"secretory vesicle","type":"broad"}],"termid":"GO:0030141"}


id: PBO:0070304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY1 pseudogene 10","termid":"PBO:0070304"}


id: PBO:0062486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily B member 2","termid":"PBO:0062486"}


id: PBO:0060233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYB proto-oncogene, transcription factor","termid":"PBO:0060233"}


id: GO:0008572
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O = ADP + phosphate. The hydrolysis of ATP required for the ATP-dependent assembly of nucleosome cores, in decondensation of sperm chromatin and in other histone-involving processes.","definition_xrefs":["EC:3.6.4.11"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleoplasmin ATPase activity (obsolete GO:0008572)","synonyms":[{"name":"nucleoplasmin ATPase activity","type":"exact"}],"termid":"GO:0008572"}


id: GO:0018810
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: trans-4-(2-(3-hydroxy)-thionaphthenyl)-2-oxo-3-butenoate + H2O = pyruvate + 3-hydroxy-2-formylbenzothiophene.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete trans-4-[2-(3-hydroxy)-thionaphthenyl]-2-oxo-3-butenoate hydratase activity (obsolete GO:0018810)","termid":"GO:0018810"}


id: MONDO:0100460
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing nicotine dependence.","definition_xrefs":["MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tobacco addiction, susceptibility to","secondary_identifiers":["OMIM:188890","UMLS:C1861063","MEDGEN:348778"],"synonyms":[{"name":"cigarette habituation, susceptibility to","type":"exact"},{"name":"nicotine addiction, protection from","type":"exact"},{"name":"nicotine addiction, susceptibility to","type":"exact"},{"name":"nicotine dependence, protection against","type":"exact"},{"name":"nicotine dependence, susceptibility to","type":"exact"},{"name":"smoking habit, susceptibility to","type":"exact"},{"name":"susceptibility to tobacco addiction","type":"exact"},{"name":"tobacco addiction, susceptibility to","type":"exact"}],"termid":"MONDO:0100460","xrefs":{"Monarch":{"xref_id":"0100460"}}}


id: PBO:0073237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenophosphate synthetase 1 pseudogene 1","termid":"PBO:0073237"}


id: MONDO:0029465
data:
  {"annotated_genes":["SJAG_01991"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86881],"is_not":false,"summary":null,"term":"MONDO:0029465"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"intellectual disability, autosomal dominant","termid":"MONDO:0100172"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01991":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual developmental disorder, autosomal dominant 69","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1808299","UMLS:C5676896","OMIM:617863"],"synonyms":[{"name":"MRD69","type":"exact"},{"name":"intellectual developmental disorder, autosomal dominant 69","type":"exact"},{"name":"mental retardation, autosomal dominant 69","type":"exact"}],"termid":"MONDO:0029465","terms_by_termid":{"MONDO:0029465":null},"xrefs":{"Monarch":{"xref_id":"0029465"}}}


id: PBO:0073019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short coiled-coil protein","termid":"PBO:0073019"}


id: GO:1903760
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization.","definition_xrefs":["GOC:BHF","GOC:rl","PMID:18337493","GOC:mtg_cardiac_conduct_nov11","GOC:TermGenie","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of potassium ion transmembrane transporter activity","termid":"GO:1901016"},{"relation_name":"is_a","term_name":"regulation of cation channel activity","termid":"GO:2001257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization","synonyms":[{"name":"regulation of voltage gated potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"regulation of voltage-dependent potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"regulation of voltage-gated potassium ion channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"regulation of voltage-sensitive potassium channel involved in ventricular cardiac muscle cell action potential","type":"exact"}],"termid":"GO:1903760"}


id: PBO:0108709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sporulation specific RabGEF Spo13","termid":"PBO:0108709"}


id: GO:0043569
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of insulin-like growth factor receptor signaling.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of insulin-like growth factor receptor signaling pathway","termid":"GO:0043567"},{"relation_name":"negatively_regulates","term_name":"insulin-like growth factor receptor signaling pathway","termid":"GO:0048009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of insulin-like growth factor receptor signaling pathway","synonyms":[{"name":"down regulation of insulin-like growth factor receptor signaling pathway","type":"exact"},{"name":"down-regulation of insulin-like growth factor receptor signaling pathway","type":"exact"},{"name":"downregulation of insulin-like growth factor receptor signaling pathway","type":"exact"},{"name":"inhibition of insulin-like growth factor receptor signaling pathway","type":"narrow"},{"name":"negative regulation of IGF receptor signaling pathway","type":"exact"},{"name":"negative regulation of IGF receptor signalling pathway","type":"exact"},{"name":"negative regulation of insulin-like growth factor receptor signalling pathway","type":"exact"}],"termid":"GO:0043569"}


id: GO:0002383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An immune response taking place in the brain or nervous system.","definition_xrefs":["ISBN:0781735149","GO_REF:0000022","GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organ or tissue specific immune response","termid":"GO:0002251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"immune response in brain or nervous system","termid":"GO:0002383"}


id: PBO:0058435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4999","termid":"PBO:0058435"}


id: MONDO:0018054
data:
  {"annotated_genes":["SJAG_00228","SJAG_02757"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88427],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014340"},{"annotations":[88825],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015001"}]},"cv_name":"mondo","definition":"An autosomal dominant heart condition that causes disruptions in the heart's normal rhythm. This condition is characterized by uncoordinated electrical activity in the heart's upper chambers (the atria), which causes the heartbeat to become fast and irregular.","direct_ancestors":[{"relation_name":"is_a","term_name":"atrial fibrillation","termid":"MONDO:0004981"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00228":null,"SJAG_02757":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"familial atrial fibrillation","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:45855978","GARD:9740","MEDGEN:894635","UMLS:C3468561","SCTID:715395008","DOID:0050650","OMIMPS:608583","Orphanet:334"],"synonyms":[{"name":"ATFB","type":"exact"},{"name":"atrial fibrillation autosomal dominant","type":"related"},{"name":"atrial fibrillation, familial","type":"related"},{"name":"autosomal dominant atrial fibrillation","type":"related"},{"name":"hereditary atrial fibrillation (disease)","type":"exact"}],"termid":"MONDO:0018054","terms_by_termid":{"MONDO:0014340":null,"MONDO:0015001":null},"xrefs":{"Monarch":{"xref_id":"0018054"}}}


id: PBO:0057041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 133a-1","termid":"PBO:0057041"}


id: PBO:0043273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain family 2 member B","termid":"PBO:0043273"}


id: PBO:0013103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MADS-box transcription factor Pvg4","termid":"PBO:0013103"}


id: GO:0110150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of biomineralization, the formation and deposition of mineral crystals by living organisms.","definition_xrefs":["PMID:22992051"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of biomineralization (obsolete GO:0110150)","synonyms":[{"name":"negative regulation of biomineral formation","type":"narrow"},{"name":"negative regulation of biomineralisation","type":"exact"},{"name":"negative regulation of mineralisation","type":"exact"},{"name":"negative regulation of mineralization","type":"exact"}],"termid":"GO:0110150"}


id: PBO:0049482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H1.6 linker histone, cluster member","termid":"PBO:0049482"}


id: MONDO:0019354
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Stickler syndrome is an inherited vitreoretinopathy characterized by the association of ocular signs with more or less complete forms of Pierre-Robin sequence, bone disorders, and sensorineural deafness (10% of cases).","definition_xrefs":["Orphanet:828"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"},{"relation_name":"is_a","term_name":"vitreoretinal degeneration","termid":"MONDO:0020248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0005328"],"is_obsolete":false,"name":"Stickler syndrome","secondary_identifiers":["NCIT:C74984","SCTID:78675000","MedDRA:10063402","icd11.foundation:246271691","DOID:0080046","NORD:1739","UMLS:C0265253","GARD:10782","MEDGEN:120521","OMIMPS:108300","ICD9:759.89"],"synonyms":[{"name":"Stickler syndrome","type":"exact"},{"name":"hereditary progressive arthroophthalmopathy","type":"exact"}],"termid":"MONDO:0019354","xrefs":{"Monarch":{"xref_id":"0019354"}}}


id: PBO:0071028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 30","termid":"PBO:0071028"}


id: MONDO:0017780
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"20p13 microdeletion syndrome is a rare chromosomal anomaly characterized by developmental delay, mild to moderate intellectual disability, epilepsy, and unspecific dysmorphic signs. High palate, delayed permanent tooth eruption, hypoplastic fingernails, clinodactyly and short fingers have also been reported.","definition_xrefs":["Orphanet:313781"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"partial monosomy of the short arm of chromosome 20","termid":"MONDO:0016898"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20p13 microdeletion syndrome","secondary_identifiers":["UMLS:C4750789","GARD:21360","MEDGEN:1655817"],"synonyms":[{"name":"20p subtelomeric deletion syndrome","type":"exact"},{"name":"Del(20)(p13)","type":"exact"},{"name":"monosomy 20p13","type":"exact"}],"termid":"MONDO:0017780","xrefs":{"Monarch":{"xref_id":"0017780"}}}


id: PBO:0086614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to both the cytoplasm and the nucleus","termid":"PBO:0086614"}


id: SO:0001396
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A post translationally modified isoleucine amino acid feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_amino_acid_feature","termid":"SO:0001385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_L_isoleucine","secondary_identifiers":["MOD:00910"],"synonyms":[{"name":"ModIle","type":"exact"},{"name":"modified L isoleucine","type":"exact"},{"name":"modified L-isoleucine","type":"exact"}],"termid":"SO:0001396"}


id: MONDO:0957216
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited primary ovarian failure","termid":"MONDO:0019852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"premature ovarian failure 21","secondary_identifiers":["OMIM:620311","MEDGEN:1841035","UMLS:C5830399"],"termid":"MONDO:0957216","xrefs":{"Monarch":{"xref_id":"0957216"}}}


id: PBO:0055615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3054","termid":"PBO:0055615"}


id: GO:0004894
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete T cell receptor activity (obsolete GO:0004894)","synonyms":[{"name":"T cell receptor activity","type":"exact"}],"termid":"GO:0004894"}


id: MONDO:0017608
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete dystrophic epidermolysis bullosa (obsolete MONDO:0017608)","secondary_identifiers":["NANDO:2201343"],"termid":"MONDO:0017608","xrefs":{"Monarch":{"xref_id":"0017608"}}}


id: PBO:0047598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FH2 domain containing 1","termid":"PBO:0047598"}


id: MONDO:0011308
data:
  {"annotated_genes":["SJAG_01405"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87733],"is_not":false,"summary":null,"term":"MONDO:0011308"}]},"cv_name":"mondo","definition":"GRACILE syndrome is an inherited lethal mitochondrial disorder characterized by fetal growth restriction (GR), aminoaciduria (A), cholestasis (C), iron overload (I), lactacidosis (L), and early death (E).","definition_xrefs":["Orphanet:53693"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"mitochondrial disease","termid":"MONDO:0044970"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01405":null},"genotype_count":0,"is_obsolete":false,"name":"GRACILE syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:400428","MESH:C537934","OMIM:603358","DOID:0111455","GARD:1","ICD9:759.89","SCTID:703388005","UMLS:C1864002"],"synonyms":[{"name":"FLNMS","type":"related"},{"name":"Fellman disease","type":"exact"},{"name":"Fellman syndrome","type":"related"},{"name":"Finnish lactic acidosis with hepatic hemosiderosis","type":"related"},{"name":"Finnish lethal neonatal metabolic syndrome","type":"related"},{"name":"Growth delay-aminoaciduria-cholestasis-iron overload-lactic acidosis-early death syndrome","type":"exact"},{"name":"Growth restriction-aminoaciduria-cholestasis-iron overload-lactic acidosis-early death syndrome","type":"exact"},{"name":"Growth retardation, amino aciduria, cholestasis, iron overload, lactic acidosis, and early death","type":"related"},{"name":"Growth retardation, aminoaciduria, cholestasis, iron overload, lactic acidosis and early death","type":"related"},{"name":"gracile syndrome","type":"exact"},{"name":"lactic acidosis, Finnish, with hepatic hemosiderosis","type":"related"}],"termid":"MONDO:0011308","terms_by_termid":{"MONDO:0011308":null},"xrefs":{"Monarch":{"xref_id":"0011308"}}}


id: GO:0039643
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of a host cell that contains the viral genome.","definition_xrefs":["GOC:bf","GOC:bm","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host intracellular part","termid":"GO:0033646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell viral nucleoid","termid":"GO:0039643"}


id: MONDO:0030866
data:
  {"annotated_genes":["SJAG_03914","SJAG_01766"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87484,87485],"is_not":false,"summary":null,"term":"MONDO:0030866"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01766":null,"SJAG_03914":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with cardiomyopathy, spasticity, and brain abnormalities","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1750805","UMLS:C5436848","DOID:0070543","OMIM:619121"],"synonyms":[{"name":"NEDCASB","type":"exact"}],"termid":"MONDO:0030866","terms_by_termid":{"MONDO:0030866":null},"xrefs":{"Monarch":{"xref_id":"0030866"}}}


id: PR:Q9P7F9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ctr5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7F9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper transport protein ctr5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1142.05","synonyms":[{"name":"Spom972h-ctr5","type":"exact"},{"name":"copper transporter 5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7F9"}


id: PBO:0078422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon GCC) 2-3","termid":"PBO:0078422"}


id: GO:0102867
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2 H+ + MoO2-molybdopterin cofactor(2-) + L-cysteine = thio-molybdenum cofactor + L-alanine + H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete molybdenum cofactor sulfurtransferase activity (obsolete GO:0102867)","termid":"GO:0102867"}


id: RO:0002531
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of immediately downstream of","direct_ancestors":[{"relation_name":"is_a","term_name":"sequentially_adjacent_to","termid":"RO:0002515"},{"relation_name":"is_a","term_name":"is_upstream_of_sequence_of","termid":"RO:0002528"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_immediately_upstream_of_sequence_of","termid":"RO:0002531"}


id: MONDO:0013449
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Leber congenital amaurosis in which the cause of the disease is a mutation in the CRX gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Leber congenital amaurosis","termid":"MONDO:0018998"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005328"],"is_obsolete":false,"name":"Leber congenital amaurosis 7","secondary_identifiers":["MEDGEN:462542","UMLS:C3151192","GARD:10880","OMIM:613829","DOID:0110333","ICD10CM:H35.5"],"synonyms":[{"name":"CRX Leber congenital amaurosis","type":"exact"},{"name":"LCA7","type":"exact"},{"name":"Leber congenital amaurosis 7","type":"exact"},{"name":"Leber congenital amaurosis caused by mutation in CRX","type":"exact"},{"name":"Leber congenital amaurosis type 7","type":"exact"}],"termid":"MONDO:0013449","xrefs":{"Monarch":{"xref_id":"0013449"}}}


id: PBO:0057792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3118-1","termid":"PBO:0057792"}


id: MONDO:0010302
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypomelanosis of Ito (HI) is a multisystemic neurocutaneous condition with hypopigmented skin lesions along the Blaschko lines.","definition_xrefs":["Orphanet:435"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"},{"relation_name":"is_a","term_name":"hypopigmentation of the skin","termid":"MONDO:0019290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005328"],"is_obsolete":false,"name":"Ito hypomelanosis","secondary_identifiers":["GARD:2992","MEDGEN:5920","DOID:3156","NORD:1274","UMLS:C0022283","OMIM:300337"],"synonyms":[{"name":"HMI","type":"related"},{"name":"Hypomelanosis of Ito","type":"exact"},{"name":"IPA","type":"related"},{"name":"Incontinentia pigmenti achromians","type":"related"},{"name":"Incontinentia pigmenti type 1","type":"exact"},{"name":"Incontinentia pigmenti type 1 (formerly)","type":"related"},{"name":"Incontinentia pigmenti, type I","type":"related"},{"name":"Incontinentia pigmenti, type I, formerly","type":"related"},{"name":"Ito","type":"related"},{"name":"Ito hypomelanosis","type":"exact"},{"name":"hi syndrome","type":"exact"},{"name":"hypomelanosis of Ito","type":"exact"},{"name":"pigmentary mosaicism, Ito type","type":"exact"}],"termid":"MONDO:0010302","xrefs":{"Monarch":{"xref_id":"0010302"}}}


id: GO:0018886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving carbon tetrachloride, a toxic, carcinogenic compound which is used as a general solvent in industrial degreasing operations, that occur in the absence of oxygen.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon tetrachloride metabolic process","termid":"GO:0018885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anaerobic carbon tetrachloride metabolic process","secondary_identifiers":["UM-BBD_pathwayID:ctc"],"synonyms":[{"name":"anaerobic carbon tetrachloride metabolism","type":"exact"}],"termid":"GO:0018886"}


id: MONDO:0010571
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A severe form of otopalatodigital syndrome spectrum disorder, and is characterized by dysmorphic facies, severe skeletal dysplasia affecting the axial and appendicular skeleton, extraskeletal anomalies (including malformations of the brain, heart, genitourinary system, and intestine) and poor survival.","definition_xrefs":["Orphanet:90652"],"direct_ancestors":[{"relation_name":"is_a","term_name":"otopalatodigital syndrome","termid":"MONDO:0019027"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otopalatodigital syndrome type 2","secondary_identifiers":["MEDGEN:337064","MESH:C538089","UMLS:C1844696","SCTID:42432003","icd11.foundation:1897308206","OMIM:304120","ICD9:759.89","NORD:1539","GARD:5802","DOID:0111784"],"synonyms":[{"name":"Andre syndrome","type":"related"},{"name":"FPO","type":"related"},{"name":"OPD 2 syndrome","type":"exact"},{"name":"OPD II syndrome","type":"exact"},{"name":"OPD syndrome 2","type":"exact"},{"name":"OPD2","type":"related"},{"name":"Otopalatodigital Syndrome Type I and II","type":"exact"},{"name":"cranio-oro-digital syndrome","type":"related"},{"name":"cranioorodigital syndrome","type":"related"},{"name":"faciopalatoosseous syndrome","type":"related"},{"name":"oto-palato-digital syndrome type 2","type":"related"},{"name":"otopalatodigital syndrome, type 2","type":"related"},{"name":"otopalatodigital syndrome, type II","type":"related"},{"name":"otopalatodigital syndrome, type II, X-linked dominant","type":"exact"}],"termid":"MONDO:0010571","xrefs":{"Monarch":{"xref_id":"0010571"}}}


id: GO:0032486
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An intracellular signaling cassette in which a small monomeric GTPase of the Rap subfamily relays a signal.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small GTPase-mediated signal transduction","termid":"GO:0007264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"Rap protein signal transduction","termid":"GO:0032486"}


id: GO:0035391
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The maintenance of chromatin in a transcriptionally silent state such as heterochromatin at silent mating-type loci.","definition_xrefs":["GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete maintenance of chromatin silencing at silent mating-type cassette (obsolete GO:0035391)","termid":"GO:0035391"}


id: PBO:0057899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3201","termid":"PBO:0057899"}


id: GO:0050550
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranyl diphosphate = pinene + diphosphate. This reaction can produce (1R,5R)-alpha-pinene, (1S,5S)-alpha-pinene, (1R,5R)-beta-pinene and (1S,5S)-beta-pinene.","definition_xrefs":["PMID:21385377","PMID:23679205"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene synthase activity","termid":"GO:0010333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"pinene synthase activity","synonyms":[{"name":"(-)-(1S,5S)-pinene synthase activity","type":"narrow"},{"name":"alpha-pinene synthase activity","type":"narrow"},{"name":"beta-geraniolene synthase activity","type":"related"},{"name":"beta-pinene synthase activity","type":"narrow"}],"termid":"GO:0050550"}


id: MONDO:0859254
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatorenocardiac degenerative fibrosis","secondary_identifiers":["OMIM:619902","UMLS:C5676996","MEDGEN:1808950"],"termid":"MONDO:0859254","xrefs":{"Monarch":{"xref_id":"0859254"}}}


id: MONDO:0005368
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete obsessive-compulsive disorder (obsolete MONDO:0005368)","termid":"MONDO:0005368","xrefs":{"Monarch":{"xref_id":"0005368"}}}


id: PBO:0038976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADPGK antisense RNA 1","termid":"PBO:0038976"}


id: PBO:0087605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the CoA-Synthesizing Protein Complex (CoA-SPC); subunits of this complex are: Cab2p, Cab3p, Cab4p, Cab5p, Sis2p and Vhs3p; involved in histone acylation; probable pantetheine-phosphate adenylyltransferase (PPAT); PPAT catalyzes the fourth step in the biosynthesis of coenzyme A from pantothenate; null mutant lethality is complemented by E. coli coaD (encoding PPAT) and by human COASY","termid":"PBO:0087605"}


id: GO:0038165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by oncostatin-M (OSM) binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription. OSM can signal via at least two different receptors (a specific receptor and a LIF receptor) to activate different downstream signal transduction pathways.","definition_xrefs":["GOC:signaling","PMID:10579456","GOC:nhn","PMID:12811586"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"oncostatin-M-mediated signaling pathway","synonyms":[{"name":"OSM signaling pathway","type":"exact"},{"name":"oncostatin-M signaling pathway","type":"exact"}],"termid":"GO:0038165"}


id: PBO:0070983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L19 pseudogene 7","termid":"PBO:0070983"}


id: GO:0005828
data:
  {"annotated_genes":["SJAG_00918"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[109337],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990941"}]},"cv_name":"cellular_component","definition":"Any of the spindle microtubules that attach to the kinetochores of chromosomes by their plus ends, and maneuver the chromosomes during mitotic or meiotic chromosome segregation.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle microtubule","termid":"GO:0005876"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00918":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0015630","GO:0005575"],"is_obsolete":false,"name":"kinetochore microtubule","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pole-to-kinetochore microtubule","type":"exact"}],"termid":"GO:0005828","terms_by_termid":{"GO:1990941":null}}


id: GO:0071500
data:
  {"annotated_genes":["SJAG_04063"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104038],"is_not":false,"summary":null,"term":"GO:0071500"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nitrosative stress stimulus. Nitrosative stress is a state often resulting from exposure to high levels of nitric oxide (NO) or the highly reactive oxidant peroxynitrite, which is produced following interaction of NO with superoxide anions.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrosative stress","termid":"GO:0051409"},{"relation_name":"is_a","term_name":"cellular response to chemical stress","termid":"GO:0062197"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04063":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to nitrosative stress","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071500","terms_by_termid":{"GO:0071500":null}}


id: PBO:0049886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HERC2 pseudogene 5","termid":"PBO:0049886"}


id: MONDO:0024532
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any otofaciocervical syndrome in which the cause of the disease is a mutation in the EYA1 gene.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"otofaciocervical syndrome","termid":"MONDO:0008163"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otofaciocervical syndrome 1","secondary_identifiers":["GARD:16502","MEDGEN:811516","OMIM:166780","UMLS:C3714941"],"synonyms":[{"name":"EYA1 otofaciocervical syndrome","type":"exact"},{"name":"OFC","type":"broad"},{"name":"OFC1","type":"related"},{"name":"OTFCS","type":"broad"},{"name":"otofaciocervical syndrome","type":"broad"},{"name":"otofaciocervical syndrome 1","type":"exact"},{"name":"otofaciocervical syndrome caused by mutation in EYA1","type":"exact"}],"termid":"MONDO:0024532","xrefs":{"Monarch":{"xref_id":"0024532"}}}


id: GO:0080041
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ADP-ribose + H2O = AMP + ribose-1-phosphate.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ADP-sugar diphosphatase activity","termid":"GO:0019144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"ADP-ribose pyrophosphohydrolase activity","termid":"GO:0080041"}


id: PBO:0038865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine deaminase RNA specific B2 (inactive)","termid":"PBO:0038865"}


id: SO:0000597
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The insertion and deletion of uridine (U) residues, usually within coding regions of mRNA transcripts of cryptogenes in the mitochondrial genome of kinetoplastid protozoa.","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000597 transcript_edited_by_U_insertion/deletion (obsolete SO:0000597)","termid":"SO:0000597"}


id: GO:0043867
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: tRNA guanine + 7-cyano-7-deazaguanine = tRNA 7-cyano-7-deazaguanine + guanine.","definition_xrefs":["PMID:7748953","PMID:16407303"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0140101"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003824","GO:0140098","GO:0003674","GO:0140101"],"is_obsolete":false,"name":"7-cyano-7-deazaguanine tRNA-ribosyltransferase activity","synonyms":[{"name":"TgtA","type":"related"},{"name":"archaeal tRNA-guanine transglycosylase activity","type":"exact"},{"name":"archaeosine tRNA-ribosyltransferase activity","type":"exact"}],"termid":"GO:0043867"}


id: PBO:0113019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Benzil oxidoreductase with preference for NADPH; localizes to the cytoplasm; sequence similarity with short-chain dehydrogenase/reductases; putative paralog of IRC24","termid":"PBO:0113019"}


id: PBO:0040755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BDNF antisense RNA","termid":"PBO:0040755"}


id: MONDO:0013655
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant non-syndromic intellectual disability in which the cause of the disease is a mutation in the GRIN1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intellectual disability, autosomal dominant","termid":"MONDO:0100172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual disability, autosomal dominant 8","secondary_identifiers":["OMIM:614254","GARD:13686","MEDGEN:481912","UMLS:C3280282","DOID:0070038"],"synonyms":[{"name":"GRIN1 autosomal dominant non-syndromic intellectual disability","type":"exact"},{"name":"MRD8","type":"exact"},{"name":"NDHMSD","type":"related"},{"name":"autosomal dominant intellectual disability 8","type":"exact"},{"name":"autosomal dominant mental retardation 8","type":"exact"},{"name":"autosomal dominant non-syndromic intellectual disability 8","type":"related"},{"name":"autosomal dominant non-syndromic intellectual disability caused by mutation in GRIN1","type":"exact"},{"name":"intellectual disability, autosomal dominant 8","type":"exact"},{"name":"intellectual disability, autosomal dominant 8, formerly","type":"related"},{"name":"intellectual disability, autosomal dominant type 8","type":"exact"},{"name":"mental retardation, autosomal dominant 8","type":"related"},{"name":"mental retardation, autosomal dominant 8, formerly","type":"related"},{"name":"mental retardation, autosomal dominant type 8","type":"exact"},{"name":"neurodevelopmental disorder with or without hyperkinetic movements and seizures, autosomal dominant","type":"related"}],"termid":"MONDO:0013655","xrefs":{"Monarch":{"xref_id":"0013655"}}}


id: GO:0005337
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide) from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase-containing compound transmembrane transporter activity","termid":"GO:0015932"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"nucleoside transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-9755015","Reactome:R-HSA-727740","Reactome:R-HSA-5628807","Reactome:R-HSA-109527","Reactome:R-HSA-109536","Reactome:R-HSA-727749","Reactome:R-HSA-727767","Reactome:R-HSA-9751024","Reactome:R-HSA-727768","Reactome:R-HSA-9754929","Reactome:R-HSA-9755035","Reactome:R-HSA-109529","Reactome:R-HSA-109534"],"synonyms":[{"name":"intracellular nucleoside transmembrane transporter activity","type":"narrow"}],"termid":"GO:0005337"}


id: MONDO:0700115
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Vitreoretinal membrane shrinkage or contraction secondary to the proliferation of primarily retinal pigment epithelial cells and glial cells, particularly fibrous astrocytes, followed by membrane formation. The formation of fibrillar collagen and cellular proliferation appear to be the basis for the contractile properties of the epiretinal and vitreous membranes.","definition_xrefs":["MESH:D018630"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal disorder","termid":"MONDO:0005283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"proliferative vitreoretinopathy","secondary_identifiers":["UMLS:C0242852","icd11.foundation:1908429642","SCTID:232016005","MEDGEN:66167"],"termid":"MONDO:0700115","xrefs":{"Monarch":{"xref_id":"0700115"}}}


id: GO:0015818
data:
  {"annotated_genes":["SJAG_02029","SJAG_04725"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111874,104624],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903714"}]},"cv_name":"biological_process","definition":"The directed movement of isoleucine, (2R*,3R*)-2-amino-3-methylpentanoic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched-chain amino acid transport","termid":"GO:0015803"},{"relation_name":"is_a","term_name":"neutral amino acid transport","termid":"GO:0015804"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02029":null,"SJAG_04725":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"isoleucine transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"L-isoleucine transport","type":"narrow"}],"termid":"GO:0015818","terms_by_termid":{"GO:1903714":null}}


id: PBO:0028196
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_L-azetidine-2-carboxylic_acid","termid":"PBO:0028196"}


id: MONDO:0019413
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ischio-vertebral syndrome is a very rare, poorly-defined bone disease characterized by ischial aplasia or hypoplasia, vertebral anomalies (vertebral malsegmentation, kyphoscoliosis), and in some patients, non-distinctive facial dysmorphism.","definition_xrefs":["Orphanet:85200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"ischio-vertebral syndrome","secondary_identifiers":["UMLS:C4274732","SCTID:715654001","GARD:19052","MEDGEN:903166","icd11.foundation:185911418"],"synonyms":[{"name":"ischio-spinal dysostosis","type":"exact"},{"name":"ischio-vertebral dysplasia","type":"exact"}],"termid":"MONDO:0019413","xrefs":{"Monarch":{"xref_id":"0019413"}}}


id: GO:0036125
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multienzyme complex possessing three kinds of enzymes that catalyze the chain reactions in the fatty acid beta-oxidation cycle, enoyl-CoA hydratase (ECH), 3-hydroxyacyl-CoA dehydrogenase (HACD), and acetyl-CoA C-acyltransferase (KACT).","definition_xrefs":["PMID:16472743","PMID:12115060","GOC:imk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"},{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"fatty acid beta-oxidation multienzyme complex","termid":"GO:0036125"}


id: PR:O59866
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04644","PANTHER:PTHR10830:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit wbp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC338.15","secondary_identifiers":["UniProtKB:O59866"],"synonyms":[{"name":"Spom972h-DDOST","type":"exact"},{"name":"oligosaccharyl transferase 48 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"oligosaccharyl transferase subunit beta (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59866"}


id: GO:0045505
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an intermediate chain of the dynein complex.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"dynein intermediate chain binding","termid":"GO:0045505"}


id: FYPO:0002102
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which any mitotic DNA damage checkpoint is normal (i.e. indistinguishable from wild type) when the cell is exposed to ultraviolet light. A DNA damage checkpoint normally regulates progression through the cell cycle in response to DNA damage.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic DNA damage checkpoint","termid":"FYPO:0001705"},{"relation_name":"is_a","term_name":"normal mitotic cell cycle regulation during cellular response to UV","termid":"FYPO:0004014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000298","FYPO:0001320","FYPO:0000002","FYPO:0000631","FYPO:0000257"],"is_obsolete":false,"name":"normal mitotic DNA damage checkpoint during cellular response to UV","synonyms":[{"name":"normal DNA damage checkpoint during cellular response to UV during mitotic cell cycle","type":"exact"},{"name":"normal mitotic DNA damage checkpoint activation during cellular response to UV","type":"exact"},{"name":"normal mitotic DNA damage checkpoint during cellular response to UV during vegetative growth","type":"exact"},{"name":"normal mitotic DNA damage checkpoint during cellular response to ultraviolet light","type":"exact"}],"termid":"FYPO:0002102"}


id: GO:0140032
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein upon glycosylation of the target protein.","definition_xrefs":["PMID:26060076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modification-dependent protein binding","termid":"GO:0140030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"glycosylation-dependent protein binding","termid":"GO:0140032"}


id: MONDO:0004914
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A vascular compression syndrome attributed to celiac trunk compression by the median arcuate ligament of the diaphragm, with presentations ranging from completely asymptomatic to myriad gastrointestinal symptoms, including chronic abdominal pain (CAP), post-prandial pain, nausea and vomiting, anorexia, early satiety, and subsequently weight loss.","definition_xrefs":["PMID:34729265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arterial disorder","termid":"MONDO:0000473"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"celiac artery stenosis from compression by median arcuate ligament of diaphragm","secondary_identifiers":["ICD10CM:I77.4","MESH:C566151","UMLS:C1861783","DOID:9892","ICD9:447.4","SCTID:9250002","OMIM:116870","MEDGEN:349361"],"synonyms":[{"name":"Harjola-Marable syndrome","type":"exact"},{"name":"Marable's syndrome","type":"exact"},{"name":"celiac access syndrome","type":"related"},{"name":"celiac artery compression syndrome","type":"exact"},{"name":"celiac artery stenosis from compression by median arcuate ligament of diaphragm","type":"exact"},{"name":"coeliac access syndrome","type":"related"},{"name":"coeliac artery compression syndrome","type":"exact"},{"name":"median arcuate ligament syndrome","type":"exact"},{"name":"median arcuate ligament syndromic disease","type":"exact"},{"name":"syndromic disease of median arcuate ligament","type":"exact"}],"termid":"MONDO:0004914","xrefs":{"Monarch":{"xref_id":"0004914"}}}


id: GO:1902808
data:
  {"annotated_genes":["SJAG_03681","SJAG_03591","SJAG_01210","SJAG_01401","SJAG_02810","SJAG_04140","SJAG_01311","SJAG_01825","SJAG_03048","SJAG_03699","SJAG_02404","SJAG_02723"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108490,107642,107804,104196,118937,111031],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900087"},{"annotations":[78467,93564,117766,76717,117200,110739],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007089"}]},"cv_name":"biological_process","definition":"Any signaling pathway that activates or increases the activity of a cell cycle cyclin-dependent protein kinase to modulate the switch from G1 phase to S phase of the cell cycle.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell cycle phase transition","termid":"GO:1901989"},{"relation_name":"is_a","term_name":"regulation of cell cycle G1/S phase transition","termid":"GO:1902806"},{"relation_name":"positively_regulates","term_name":"cell cycle G1/S phase transition","termid":"GO:0044843"}],"gene_count":12,"genes_by_uniquename":{"SJAG_01210":null,"SJAG_01311":null,"SJAG_01401":null,"SJAG_01825":null,"SJAG_02404":null,"SJAG_02723":null,"SJAG_02810":null,"SJAG_03048":null,"SJAG_03591":null,"SJAG_03681":null,"SJAG_03699":null,"SJAG_04140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell cycle G1/S phase transition","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"activation of cell cycle G1/S phase transition","type":"narrow"},{"name":"up regulation of cell cycle G1/S phase transition","type":"exact"},{"name":"up-regulation of cell cycle G1/S phase transition","type":"exact"},{"name":"upregulation of cell cycle G1/S phase transition","type":"exact"}],"termid":"GO:1902808","terms_by_termid":{"GO:0007089":null,"GO:1900087":null}}


id: MONDO:0012508
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome that combines agammaglobulinemia with marked microcephaly, significant developmental delay, craniosynostosis, a severe dermatitis, cleft palate, narrowing of the choanae, and blepharophimosis. It has been described in three siblings, two males and one female, born to nonconsanguineous parents. Transmission is probably autosomal recessive. It has been suggested that this syndrome represents a new form of agammaglobulinemia due to a defect in early B-cell maturation.","definition_xrefs":["Orphanet:83617"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"is_a","term_name":"congenital agammaglobulinemia","termid":"MONDO:0001902"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"syndromic agammaglobulinemia","termid":"MONDO:0016463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"agammaglobulinemia-microcephaly-craniosynostosis-severe dermatitis syndrome","secondary_identifiers":["MEDGEN:351236","GARD:10011","OMIM:610483","UMLS:C1864848","MESH:C538055","SCTID:722281001"],"synonyms":[{"name":"agammaglobulinemia, microcephaly, and severe dermatitis","type":"related"}],"termid":"MONDO:0012508","xrefs":{"Monarch":{"xref_id":"0012508"}}}


id: PBO:0074615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 16B","termid":"PBO:0074615"}


id: PBO:0046010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 1 pseudogene 5","termid":"PBO:0046010"}


id: PBO:0069902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1193, pseudogene","termid":"PBO:0069902"}


id: PR:O94712
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gid1 gene.","definition_xrefs":["UniProtKB:O94712","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1259.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1259.12c","synonyms":[{"name":"Spom972h-gid1","type":"exact"}],"termid":"PR:O94712"}


id: GO:0140707
data:
  {"annotated_genes":["SJAG_01745","SJAG_03449","SJAG_03103"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93166,105425,121438],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062239"}]},"cv_name":"molecular_function","definition":"Binding to chromatin and the nuclear inner membrane, in order to establish and maintain the heterochromatin location and organization, or to enable equal segregation of the nuclear membrane during mitosis.","definition_xrefs":["PMID:24184107","PMID:31048766"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-membrane adaptor activity","termid":"GO:0043495"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01745":null,"SJAG_03103":null,"SJAG_03449":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0030674","GO:0003674","GO:0060090"],"is_obsolete":false,"name":"chromatin-nuclear membrane anchor activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:24184107":null},"termid":"GO:0140707","terms_by_termid":{"GO:0062239":null}}


id: PBO:0109141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptic, EGF-CFC family member 1","termid":"PBO:0109141"}


id: PR:O14086
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase I subunit RPA49 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01631","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I subunit rpa49 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F3.03c","secondary_identifiers":["UniProtKB:O14086"],"synonyms":[{"name":"DNA-directed RNA polymerase I 49 kDa polypeptide (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase I subunit A49 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-POLR1E","type":"exact"}],"termid":"PR:O14086"}


id: PBO:0048931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi phosphoprotein 3","termid":"PBO:0048931"}


id: MONDO:0019934
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosomal disorder in which the chromosomal constitution of a cell containing multiples of the normal number of chromosomes; includes triploidy (symbol: 3N), tetraploidy (symbol: 4N), etc.","definition_xrefs":["MESH:D011123"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal disorder","termid":"MONDO:0019040"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyploidy","secondary_identifiers":["UMLS:C0032578","Orphanet:96321","GARD:19348","MEDGEN:18567","SCTID:72991005","icd11.foundation:1286128770"],"termid":"MONDO:0019934","xrefs":{"Monarch":{"xref_id":"0019934"}}}


id: GO:0000002
data:
  {"annotated_genes":["SJAG_00611","SJAG_03068","SJAG_03957","SJAG_01648","SJAG_02658","SJAG_02528","SJAG_01948","SJAG_03906","SJAG_05280","SJAG_01807","SJAG_03038","SJAG_04064","SJAG_04752","SJAG_03780","SJAG_00153","SJAG_01262","SJAG_03724","SJAG_00154","SJAG_00198"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78077,80939,97561],"is_not":false,"summary":null,"term":"GO:0000002"},{"annotations":[92193],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032043"},{"annotations":[113439,96551,98935,104319,94376],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032042"},{"annotations":[110392,101122,97961,78012,104723,72948,115761,114374,104703],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043504"},{"annotations":[76576],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006264"}]},"cv_name":"biological_process","definition":"The maintenance of the structure and integrity of the mitochondrial genome; includes replication and segregation of the mitochondrial chromosome.","definition_xrefs":["GOC:vw","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrion organization","termid":"GO:0007005"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00153":null,"SJAG_00154":null,"SJAG_00198":null,"SJAG_00611":null,"SJAG_01262":null,"SJAG_01648":null,"SJAG_01807":null,"SJAG_01948":null,"SJAG_02528":null,"SJAG_02658":null,"SJAG_03038":null,"SJAG_03068":null,"SJAG_03724":null,"SJAG_03780":null,"SJAG_03906":null,"SJAG_03957":null,"SJAG_04064":null,"SJAG_04752":null,"SJAG_05280":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007005","GO:0008150"],"is_obsolete":false,"name":"mitochondrial genome maintenance","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0000002","terms_by_termid":{"GO:0000002":null,"GO:0006264":null,"GO:0032042":null,"GO:0032043":null,"GO:0043504":null}}


id: PBO:0039105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AT-hook DNA binding motif containing 1","termid":"PBO:0039105"}


id: PBO:0047836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box R1","termid":"PBO:0047836"}


id: PBO:0018179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic (sorulation) septin Spn6","termid":"PBO:0018179"}


id: GO:0070281
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to pyridoxamine, 4-(aminomethyl)-5-(hydroxymethyl)-2-methylpyridin-3-ol, a form of vitamin B6.","definition_xrefs":["CHEBI:16410","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"},{"relation_name":"is_a","term_name":"vitamin B6 binding","termid":"GO:0070279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"pyridoxamine binding","termid":"GO:0070281"}


id: PBO:0065708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudouridylate synthase 7 pseudogene 1","termid":"PBO:0065708"}


id: PR:Q09698
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cph2 gene.","definition_xrefs":["UniProtKB:Q09698","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C2F7.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F7.07c","synonyms":[{"name":"Spom972h-cph2","type":"exact"}],"termid":"PR:Q09698"}


id: PBO:0074143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member B3","termid":"PBO:0074143"}


id: PBO:0086847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative quinone oxidoreductase; overexpression improves ethanol production and acid stress resistance; involved in copper metabolism; similar to Cochliobolus carbonum toxD gene","termid":"PBO:0086847"}


id: MONDO:0010981
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tibia absent - polydactyly - arachnoid cyst syndrome is a very rare constellation of multiple anomalies, including absence or hypoplasia of the tibia.","definition_xrefs":["Orphanet:3328"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"absent tibia-polydactyly-arachnoid cyst syndrome","secondary_identifiers":["MEDGEN:318725","MESH:C563403","SCTID:733068001","UMLS:C1832859","OMIM:601027","GARD:5210"],"synonyms":[{"name":"Holmes Collins syndrome","type":"related"},{"name":"Holmes-Collins syndrome","type":"exact"},{"name":"absence/hypoplasia of tibia, polydactyly, retrocerebellar arachnoid cyst, and other anomalies","type":"related"},{"name":"tibia absent polydactyly arachnoid cyst","type":"related"},{"name":"tibia, absence or hypoplasia of, with polydactyly, RETROCEREBELLAR arachnoid cyst, and other anomalies","type":"related"},{"name":"tibia, absence or hypoplasia of, with polydactyly, retrocerebellar arachnoid cyst, and other anomalies","type":"related"}],"termid":"MONDO:0010981","xrefs":{"Monarch":{"xref_id":"0010981"}}}


id: PBO:0047056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 117 member B","termid":"PBO:0047056"}


id: PBO:0038658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acrosin","termid":"PBO:0038658"}


id: PBO:0051137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-11","termid":"PBO:0051137"}


id: GO:0045850
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of nurse cell apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nurse cell apoptotic process","termid":"GO:0045477"},{"relation_name":"is_a","term_name":"positive regulation of apoptotic process involved in development","termid":"GO:1904747"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"nurse cell apoptotic process","termid":"GO:0045476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of nurse cell apoptotic process","synonyms":[{"name":"activation of nurse cell apoptosis","type":"narrow"},{"name":"positive regulation of nurse cell apoptosis","type":"narrow"},{"name":"stimulation of nurse cell apoptosis","type":"narrow"},{"name":"up regulation of nurse cell apoptosis","type":"exact"},{"name":"up-regulation of nurse cell apoptosis","type":"exact"},{"name":"upregulation of nurse cell apoptosis","type":"exact"}],"termid":"GO:0045850"}


id: GO:0035363
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A nuclear body associated with the histone gene locus that is thought to contain all of the factors necessary for histone mRNA transcription and pre-mRNA processing. In Drosophila, U7 snRNP is located in the histone locus body rather than the distinct Cajal body.","definition_xrefs":["PMID:18927579","GOC:sart","PMID:19620235","PMID:16533947"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear ribonucleoprotein granule","termid":"GO:0140168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005654"}],"interesting_parent_ids":["GO:0005654","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"histone locus body","synonyms":[{"name":"HLB","type":"exact"}],"termid":"GO:0035363"}


id: GO:0003334
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a keratinocyte over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell development","termid":"GO:0002064"},{"relation_name":"part_of","term_name":"keratinocyte differentiation","termid":"GO:0030216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"keratinocyte development","secondary_identifiers":["Reactome:R-HSA-9725554"],"termid":"GO:0003334"}


id: GO:0042694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a muscle cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed.","definition_xrefs":["CL:0000187","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate specification","termid":"GO:0001708"},{"relation_name":"part_of","term_name":"muscle cell fate commitment","termid":"GO:0042693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"muscle cell fate specification","termid":"GO:0042694"}


id: GO:0052648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ribitol phosphates, any phosphorylated form of ribitol, the pentitol derived formally by reduction of the -CHO group of either D- or L-ribose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentitol phosphate metabolic process","termid":"GO:0052647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ribitol phosphate metabolic process","synonyms":[{"name":"ribitol phosphate metabolism","type":"exact"}],"termid":"GO:0052648"}


id: PBO:0056060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LURAP1L antisense RNA 1","termid":"PBO:0056060"}


id: GO:0030944
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a KDEL sequence, the C terminus tetrapeptide sequence Asp-Asp-Glu-Leu found in proteins that are to be retained in the endoplasmic reticulum.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ER retention sequence binding","termid":"GO:0046923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005048"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005048"],"is_obsolete":false,"name":"DDEL sequence binding","termid":"GO:0030944"}


id: FYPO:0005001
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein having high molecular mass due to polyubiquitin conjugation is lower than normal.","definition_xrefs":["PomBase:mah","PMID:10082519"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular HMW ubiquitin conjugate level","synonyms":[{"name":"decreased cellular HMW ubiquitin conjugate level during mitotic cell cycle","type":"related"},{"name":"decreased cellular HMW ubiquitin conjugate level during vegetative growth","type":"exact"},{"name":"decreased cellular high molecular mass ubiquitin conjugate level during vegetative growth","type":"exact"},{"name":"decreased cellular high molecular weight ubiquitin conjugate level during vegetative growth","type":"exact"},{"name":"reduced cellular HMW ubiquitin conjugate level","type":"exact"}],"termid":"FYPO:0005001"}


id: PBO:0087147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-dependent ATPase; involved in pre-rRNA processing at sites A0, A1, and A2, and in control of cell cycle progression; contains two upstream open reading frames (uORFs) in 5' untranslated region which regulate translation","termid":"PBO:0087147"}


id: GO:0046737
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The intentional, virally-encoded stimulation of a cell-mediated host defense response to viral infection.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete induction of cell-mediated immune response in host by virus (obsolete GO:0046737)","synonyms":[{"name":"active induction of cell-mediated immune response in host by virus","type":"related"},{"name":"active viral induction of cell-mediated immune response in host","type":"exact"}],"termid":"GO:0046737"}


id: GO:0016412
data:
  {"annotated_genes":["SJAG_04305"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77891],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009001"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a fatty acyl-CoA + L-seryl-[protein] = CoA + O-fatty acyl-L-seryl-[protein].","definition_xrefs":["RHEA:68272"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04305":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"serine O-acyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0016412","terms_by_termid":{"GO:0009001":null}}


id: MONDO:0014185
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"3q13 microdeletion syndrome is a rare chromosomal anomaly syndrome resulting from a partial deletion of the long arm of chromosome 3. Phenotype can be highly variable, but it is primarily characterized by significant developmental delay, postnatal growth above the mean, muscular hypotonia and distinctive facial features (such as broad and prominent forehead, hypertelorism, epicantic folds, anti-mongloid slanted eyes, ptosis, short philtrum, protruding lips with a full lower lip, high arched palate). Abnormal hypoplastic male genitalia and skeletal abnormalities are frequently present.","definition_xrefs":["Orphanet:1621"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 3","termid":"MONDO:0016902"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 3q13.31 deletion syndrome","secondary_identifiers":["DOID:0060418","GARD:16573","OMIM:615433","SCTID:726705007","UMLS:C3809490","MESH:C536808","MEDGEN:815820"],"synonyms":[{"name":"3q13 microdeletion syndrome","type":"exact"},{"name":"Del(3)(q13)","type":"exact"},{"name":"chromosome 3q13.31 deletion syndrome","type":"exact"},{"name":"monosomy 3q13","type":"exact"}],"termid":"MONDO:0014185","xrefs":{"Monarch":{"xref_id":"0014185"}}}


id: GO:0010498
data:
  {"annotated_genes":["SJAG_00766","SJAG_04429","SJAG_00341","SJAG_03350","SJAG_00837","SJAG_01678","SJAG_01497","SJAG_00146","SJAG_01801","SJAG_02162","SJAG_02822","SJAG_02419","SJAG_01528","SJAG_01854","SJAG_02341","SJAG_03657","SJAG_01626","SJAG_01585","SJAG_00941","SJAG_00790","SJAG_04345","SJAG_03175","SJAG_02705","SJAG_05274","SJAG_02539","SJAG_01768","SJAG_04661","SJAG_02244","SJAG_04904","SJAG_04573","SJAG_02992","SJAG_00712","SJAG_03841","SJAG_01022","SJAG_01134","SJAG_03699","SJAG_04384","SJAG_00435","SJAG_01253","SJAG_00642","SJAG_00931","SJAG_01203","SJAG_03037","SJAG_01051","SJAG_02774","SJAG_03191","SJAG_04969","SJAG_00131","SJAG_02651","SJAG_01956","SJAG_03048","SJAG_03408","SJAG_00762","SJAG_04335","SJAG_03454","SJAG_04144","SJAG_01467","SJAG_00452","SJAG_00666","SJAG_01074","SJAG_05022","SJAG_00173","SJAG_04619","SJAG_00128","SJAG_01556","SJAG_03615","SJAG_04357","SJAG_01131","SJAG_03680","SJAG_02021","SJAG_00644","SJAG_00403","SJAG_04229","SJAG_03345","SJAG_01068","SJAG_02591","SJAG_00778","SJAG_07000","SJAG_02041","SJAG_03151","SJAG_03809","SJAG_03417","SJAG_05252","SJAG_02625","SJAG_03032","SJAG_04633","SJAG_00855","SJAG_00738","SJAG_04540","SJAG_00948","SJAG_04211","SJAG_00808","SJAG_01544","SJAG_04888","SJAG_05236","SJAG_04655","SJAG_02900","SJAG_01679","SJAG_01392","SJAG_02186","SJAG_04539","SJAG_00530","SJAG_00651","SJAG_01472","SJAG_02485","SJAG_05329","SJAG_02694","SJAG_00192","SJAG_04572","SJAG_00293","SJAG_03153","SJAG_00475","SJAG_03858","SJAG_02685","SJAG_00188","SJAG_04583","SJAG_01014","SJAG_01637","SJAG_04088","SJAG_01737","SJAG_04520","SJAG_01858","SJAG_04151","SJAG_03968","SJAG_03321","SJAG_04612","SJAG_00071","SJAG_05316","SJAG_00300","SJAG_01760","SJAG_01617","SJAG_04306","SJAG_04541","SJAG_04309","SJAG_00627","SJAG_01535","SJAG_00681","SJAG_00312","SJAG_03575","SJAG_01709","SJAG_01210","SJAG_01900","SJAG_02502","SJAG_01656","SJAG_01489","SJAG_03763","SJAG_02562","SJAG_03351","SJAG_02723","SJAG_03651","SJAG_01593","SJAG_00126","SJAG_00052","SJAG_00054","SJAG_03561","SJAG_04853","SJAG_00552","SJAG_02197","SJAG_00591","SJAG_01886","SJAG_04477","SJAG_03219","SJAG_04484","SJAG_03385","SJAG_03227","SJAG_03638"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[58137,61476,80736,106698,74780,96985,78321,109436,80845,71823,82132,116130,79564,67516,65540,72600,75715,81694],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031145"},{"annotations":[116273],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140708"},{"annotations":[111485,115481,109846,112181,111592],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071629"},{"annotations":[96803,95379,106562,75222,72496,109509,119022,72753,99653,89608,72583,102589,80445,73046,80404,80562,81310,76095,76533,117719,74224,113835,110014,78109,80251,104750,91363,93216,106648,80368,118457,96533,72558,109949,100036],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036503"},{"annotations":[105228,91075,89609,114842],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180027"},{"annotations":[104183],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905785"},{"annotations":[79281,79802],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1904293"},{"annotations":[108784,79064],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0032435"},{"annotations":[112706,78297],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071630"},{"annotations":[90758],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905786"},{"annotations":[68352,70345,66698,68858,69836,62259],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1901800"},{"annotations":[113568,118938,108492,110738,104205],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0032436"},{"annotations":[72569,77036,78678,80804],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010499"},{"annotations":[100622,71542,78640,90397,80778,99521,67737,114675,97626,95163,103007,73436,74868,80190,95969,111086,67543,119069,76898,81264,119880,79666,77302,81311,73938,82124,77504,90108,78204,112569,103472,74249,96804,113555,108289,81424,72725,113011,71738,80142,63924,79143,64468,75443,114982,116987,117125,100208,80446,98052,116115,75961,73652,73853,79113,106181,111154,101450,118252,79860,74786,95810,68256,76022,80650,81733,80927,79751,103923,79745,72876,73051,81595,113001],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043161"},{"annotations":[116489],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032434"},{"annotations":[77353,80851],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030970"},{"annotations":[98516,106649,117273,91079,105793,71580,78363],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990116"},{"annotations":[118712,97358,96161,99589,76116,82093,106420,106703,61263,109061,110928,73589,103928],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031146"},{"annotations":[95356,97523],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097466"},{"annotations":[76124,65627,98757],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071596"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds that is mediated by the proteasome.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein catabolic process","termid":"GO:0030163"},{"relation_name":"is_a","term_name":"proteolysis involved in protein catabolic 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protein catabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null},"synonyms":[{"name":"proteasome-mediated protein catabolic process","type":"exact"},{"name":"proteasome-mediated protein catabolism","type":"exact"}],"termid":"GO:0010498","terms_by_termid":{"GO:0010499":null,"GO:0030970":null,"GO:0031145":null,"GO:0031146":null,"GO:0032434":null,"GO:0032435":null,"GO:0032436":null,"GO:0036503":null,"GO:0043161":null,"GO:0071596":null,"GO:0071629":null,"GO:0071630":null,"GO:0097466":null,"GO:0140708":null,"GO:0180027":null,"GO:1901800":null,"GO:1904293":null,"GO:1905785":null,"GO:1905786":null,"GO:1990116":null}}


id: PBO:0040690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"branched chain amino acid transaminase 2","termid":"PBO:0040690"}


id: GO:0060440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process pertaining to the initial formation of a trachea from unspecified parts. The process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the trachea is recognizable. The trachea is the portion of the airway that attaches to the bronchi as it branches.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ formation","termid":"GO:0048645"},{"relation_name":"part_of","term_name":"trachea morphogenesis","termid":"GO:0060439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trachea formation","termid":"GO:0060440"}


id: MOD:01060
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-carboxamidomethyl-L-cysteine.","definition_xrefs":["DeltaMass:196","Unimod:4#C","PubMed:18306178","DeltaMass:337","PubMed:11510821","OMSSA:3","PubMed:10504701","PubMed:12422359"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iodoacetamide derivatized residue","termid":"MOD:00397"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-carboxamidomethyl-L-cysteine","synonyms":[{"name":"CamC","type":"exact"},{"name":"CamCys","type":"exact"},{"name":"Carbamidomethyl","type":"related"},{"name":"Carboxamidomethyl (on Cysteine)","type":"exact"},{"name":"Carboxyamidomethyl Cystenyl","type":"exact"},{"name":"Iodoacetamide derivative","type":"related"},{"name":"S-carbamoylmethyl-L-cysteine","type":"exact"},{"name":"amidocarboxymethylcysteine","type":"exact"},{"name":"carbamidomethylc","type":"exact"},{"name":"carbamoylmethylcysteine","type":"exact"}],"termid":"MOD:01060"}


id: PBO:0074405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMIM10L2B antisense RNA 1","termid":"PBO:0074405"}


id: PBO:0041527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 16 open reading frame 89","termid":"PBO:0041527"}


id: MOD:01004
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:95"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diaminopropionyl","termid":"MOD:01004"}


id: GO:0038016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A receptor-mediated endocytosis process that results in the movement of an insulin receptor from the plasma membrane to the inside of the cell.","definition_xrefs":["GOC:bf","PMID:9609114","PMID:3907718"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor internalization","termid":"GO:0031623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192","GO:0051179"],"is_obsolete":false,"name":"insulin receptor internalization","synonyms":[{"name":"insulin receptor endocytosis","type":"broad"}],"termid":"GO:0038016"}


id: PBO:0066802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 101","termid":"PBO:0066802"}


id: GO:0070016
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an armadillo repeat domain, an approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity protein armadillo. Arm-repeat proteins are involved in various processes, including intracellular signaling and cytoskeletal regulation.","definition_xrefs":["GOC:vk","GOC:mah","GOC:BHF","InterPro:IPR000225"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"armadillo repeat domain binding","synonyms":[{"name":"Arm repeat domain binding","type":"exact"},{"name":"armadillo domain binding","type":"exact"},{"name":"armadillo repeat binding","type":"exact"}],"termid":"GO:0070016"}


id: PBO:0089589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone demethylase SWIRM2","termid":"PBO:0089589"}


id: GO:0048499
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the membrane surrounding a synaptic vesicle.","definition_xrefs":["GOC:mah","PMID:10620806","GOC:jl","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"},{"relation_name":"part_of","term_name":"endomembrane system organization","termid":"GO:0010256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"synaptic vesicle membrane organization","synonyms":[{"name":"SLMV biogenesis","type":"narrow"},{"name":"synaptic vesicle membrane organisation","type":"exact"},{"name":"synaptic vesicle membrane organization and biogenesis","type":"related"}],"termid":"GO:0048499"}


id: GO:1901229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of non-canonical Wnt signaling pathway via JNK cascade.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of non-canonical Wnt signaling pathway via JNK cascade (obsolete GO:1901229)","synonyms":[{"name":"regulation of non-canonical Wnt receptor signaling pathway via JNK cascade","type":"exact"},{"name":"regulation of non-canonical Wnt receptor signalling pathway via JNK cascade","type":"exact"},{"name":"regulation of non-canonical Wnt-activated signaling pathway via JNK cascade","type":"exact"}],"termid":"GO:1901229"}


id: GO:0170057
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the joining of an RNA with 3'-phosphate or 2',3'-cyclic-phosphate ends to an RNA with 5'-hydroxy ends according to either (i) a 3'-end 3'-phospho-ribonucleotide-RNA + a 5'-end dephospho-ribonucleoside-RNA + GTP = a ribonucleotidyl-ribonucleotide-RNA + diphosphate + GMP; or (ii) a 3'-end 2',3'-cyclophospho-ribonucleotide-RNA + a 5'-end dephospho-ribonucleoside-RNA + GTP + H2O = a ribonucleotidyl-ribonucleotide-RNA + diphosphate + GMP + H+.","definition_xrefs":["PMID:21311021","EC:6.5.1.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA ligase activity","termid":"GO:0008452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0140098","GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"RNA ligase (GTP) activity","synonyms":[{"name":"3'-phosphate/5'-hydroxy nucleic acid ligase activity","type":"exact"}],"termid":"GO:0170057"}


id: MONDO:0007019
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory pathologic process that affects the vulva and the vagina.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vaginitis","termid":"MONDO:0002234"},{"relation_name":"is_a","term_name":"vulvitis","termid":"MONDO:0007018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vulvovaginitis","secondary_identifiers":["MedDRA:10047794","NCIT:C35131","EFO:1001240","SCTID:53277000","MESH:D014848","UMLS:C0042998","MEDGEN:12129","DOID:2273"],"synonyms":[{"name":"Vulvo-vaginitis","type":"exact"}],"termid":"MONDO:0007019","xrefs":{"Monarch":{"xref_id":"0007019"}}}


id: PBO:0028267
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitochondrial_RNA_level","termid":"PBO:0028267"}


id: GO:0044019
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: acetyl-CoA + histone H3 L-lysine (position 72) = CoA + histone H3 N6-acetyl-L-lysine (position 72).","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3K72 acetyltransferase activity (obsolete GO:0044019)","synonyms":[{"name":"histone H3-K72 acetyltransferase activity","type":"exact"},{"name":"histone acetylase activity (H3-K72 specific)","type":"exact"},{"name":"histone acetyltransferase activity (H3-K72 specific)","type":"exact"},{"name":"histone lysine N-acetyltransferase activity (H3-K72 specific)","type":"exact"}],"termid":"GO:0044019"}


id: GO:0001223
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a transcription coactivator, a protein involved in positive regulation of transcription via protein-protein interactions with transcription factors and other proteins that positively regulate transcription. Transcription coactivators do not bind DNA directly, but rather mediate protein-protein interactions between activating transcription factors and the basal transcription machinery.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription coregulator binding","termid":"GO:0001221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"transcription coactivator binding","secondary_identifiers":["GO:0001225"],"synonyms":[{"name":"RNA polymerase II transcription coactivator binding","type":"related"}],"termid":"GO:0001223"}


id: PBO:0055164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2584","termid":"PBO:0055164"}


id: PBO:0089060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger, MIZ-type","termid":"PBO:0089060"}


id: PBO:0081109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFAND2A divergent transcript","termid":"PBO:0081109"}


id: GO:0019298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of coenzyme B (7-mercaptoheptanoylthreonine phosphate), a coenzyme involved in the utilization of methane by methanogenic prokaryotes.","definition_xrefs":["PMID:10940051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coenzyme B metabolic process","termid":"GO:0019297"},{"relation_name":"is_a","term_name":"modified amino acid biosynthetic process","termid":"GO:0042398"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"coenzyme B biosynthetic process","secondary_identifiers":["MetaCyc:P241-PWY"],"synonyms":[{"name":"coenzyme B anabolism","type":"exact"},{"name":"coenzyme B biosynthesis","type":"exact"},{"name":"coenzyme B formation","type":"exact"},{"name":"coenzyme B synthesis","type":"exact"}],"termid":"GO:0019298"}


id: MONDO:1010083
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Scott Syndrome that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hematologic disorder, non-human animal","termid":"MONDO:1011319"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Scott Syndrome, non-human animal","secondary_identifiers":["OMIA:001353"],"termid":"MONDO:1010083","xrefs":{"Monarch":{"xref_id":"1010083"}}}


id: PBO:0059022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 11","termid":"PBO:0059022"}


id: SO:0001487
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The status of a whole genome sequence, where overall coverage represents at least 90 percent of the genome.","definition_xrefs":["DOI:10.1126"],"direct_ancestors":[{"relation_name":"is_a","term_name":"whole_genome_sequence_status","termid":"SO:0001499"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high_quality_draft","synonyms":[{"name":"high quality draft","type":"exact"}],"termid":"SO:0001487"}


id: PBO:0084875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the small subunit; MRP21 exhibits genetic interactions with mutations in the COX2 and COX3 mRNA 5'-untranslated leader sequences","termid":"PBO:0084875"}


id: MONDO:0800449
data:
  {"annotated_genes":["SJAG_02068","SJAG_04790","SJAG_00158"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87117,87118,87116],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0019149"},{"annotations":[87374,87375,87373],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0019148"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic dyslipidemia","termid":"MONDO:0015905"},{"relation_name":"is_a","term_name":"lysosomal lipid storage disorder","termid":"MONDO:0019245"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00158":null,"SJAG_02068":null,"SJAG_04790":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"lysosomal acid lipase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080217","GARD:12097","OMIMPS:278000","MEDGEN:1807768","Orphanet:275761","icd11.foundation:381622932","UMLS:C5574740","MESH:C531854","SCTID:715923003"],"synonyms":[{"name":"LAL deficiency","type":"exact"}],"termid":"MONDO:0800449","terms_by_termid":{"MONDO:0019148":null,"MONDO:0019149":null},"xrefs":{"Monarch":{"xref_id":"0800449"}}}


id: PBO:0110048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial MICOS interactor required for cristae morphology Mmc1","termid":"PBO:0110048"}


id: MONDO:1011267
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cone-rod dystrophy that occurs in black-footed cats due to a mutation in the IQCB1 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cone-rod dystrophy, non-human animal","termid":"MONDO:1012582"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cone-rod dystrophy, IQCB1-related, black-footed cat","secondary_identifiers":["OMIA:001675-61379"],"synonyms":[{"name":"retinal atrophy - cone-rod dystrophy 2, black-footed cat","type":"related"}],"termid":"MONDO:1011267","xrefs":{"Monarch":{"xref_id":"1011267"}}}


id: PBO:0002468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle pole body protein Nuf2","termid":"PBO:0002468"}


id: PBO:0043836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carnitine palmitoyltransferase 1A","termid":"PBO:0043836"}


id: PBO:0047004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A7","termid":"PBO:0047004"}


id: GO:0005005
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a transmembrane ephrin to initiate a change in cell activity.","definition_xrefs":["GOC:mah","PMID:9530499"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ephrin receptor activity","termid":"GO:0005003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0004672","GO:0003824","GO:0140096","GO:0038023","GO:0016301"],"is_obsolete":false,"name":"transmembrane-ephrin receptor activity","synonyms":[{"name":"transmembrane-Eph receptor activity","type":"exact"}],"termid":"GO:0005005"}


id: PBO:0034788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic centromere-SPB clustering protein Csi1","termid":"PBO:0034788"}


id: PBO:0077501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 219","termid":"PBO:0077501"}


id: GO:0071520
data:
  {"annotated_genes":["SJAG_04621","SJAG_00938","SJAG_02864","SJAG_04498"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91142,99842,100100,109973],"is_not":false,"summary":null,"term":"GO:0071520"}]},"cv_name":"biological_process","definition":"A process of actin filament bundle distribution that occurs in the context of assembling an actomyosin contractile ring during cytokinesis, and that results in the compaction of actin filaments into a tight ring.","definition_xrefs":["GOC:mah","PMID:19713940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament bundle convergence","termid":"GO:0090426"},{"relation_name":"is_a","term_name":"actomyosin contractile ring assembly actin filament organization","termid":"GO:2000689"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_02864":null,"SJAG_04498":null,"SJAG_04621":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0007010","GO:0044085","GO:0030036"],"is_obsolete":false,"name":"actomyosin contractile ring assembly actin filament bundle convergence","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"actin filament bundle convergence involved in actomyosin contractile ring formation","type":"related"},{"name":"actin filament bundle convergence involved in cytokinetic actomyosin contractile ring assembly","type":"exact"}],"termid":"GO:0071520","terms_by_termid":{"GO:0071520":null}}


id: PBO:0048525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gem nuclear organelle associated protein 2","termid":"PBO:0048525"}


id: MOD:00206
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to L-isoglutamyl-polyglycine.","definition_xrefs":["RESID:AA0201","PubMed:16368691","PubMed:7992051","ChEBI:21343","PubMed:10074368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-isoglutamyl-polyglycine","synonyms":[{"name":"L-isoglutamyl-polyglycine","type":"exact"},{"name":"MOD_RES 5-glutamyl polyglycine","type":"exact"},{"name":"gamma-glutamylpolyglycine","type":"exact"}],"termid":"MOD:00206"}


id: GO:0060113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells, acquire specialized structural and/or functional features of inner ear receptor cells. Inner ear receptor cells are mechanorecptors found in the inner ear responsible for transducing signals involved in balance and sensory perception of sound.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mechanoreceptor differentiation","termid":"GO:0042490"},{"relation_name":"part_of","term_name":"inner ear development","termid":"GO:0048839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inner ear receptor cell differentiation","synonyms":[{"name":"inner ear hair cell differentiation","type":"exact"}],"termid":"GO:0060113"}


id: MOD:00173
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to N-threonyl-glycosylphosphatidylinositolethanolamine.","definition_xrefs":["RESID:AA0164"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylphosphatidylinositolated residue","termid":"MOD:00818"},{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"},{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:01155","MOD:00764"],"is_obsolete":false,"name":"N-threonyl-glycosylphosphatidylinositolethanolamine","synonyms":[{"name":"GPIThr","type":"exact"},{"name":"LIPID GPI-anchor amidated threonine","type":"exact"},{"name":"N-threonyl-glycosylphosphatidylinositolethanolamine","type":"exact"}],"termid":"MOD:00173"}


id: MOD:00355
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-(riboflavin phosphoryl)-L-serine.","definition_xrefs":["RESID:AA0350","Unimod:442#S"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"},{"relation_name":"is_a","term_name":"riboflavin-phosphoryl","termid":"MOD:01164"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(riboflavin phosphoryl)-L-serine","synonyms":[{"name":"(R)-2-amino-3-(riboflavin 5'-hydrogen phosphonoxy)propanoic acid","type":"exact"},{"name":"FMN","type":"related"},{"name":"MOD_RES FMN phosphoryl serine","type":"exact"},{"name":"O-(riboflavin phosphoryl)-L-serine","type":"exact"},{"name":"O3-(riboflavin phosphoryl)","type":"related"},{"name":"O3-seryl FMN","type":"exact"},{"name":"O3-seryl flavin mononucleotide","type":"exact"},{"name":"OFMNSer","type":"exact"}],"termid":"MOD:00355"}


id: PBO:0091534
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binding affinity for ADP-Pi-bound F-actin Kd 220 nM","termid":"PBO:0091534"}


id: PBO:0114438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TM7SF3 antisense RNA 1","termid":"PBO:0114438"}


id: PBO:0047211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 221 member B","termid":"PBO:0047211"}


id: PBO:0000381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospho-2-dehydro-3-deoxyheptonate aldolase (predicted)","termid":"PBO:0000381"}


id: PBO:0059134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MPHOSPH10 pseudogene 1","termid":"PBO:0059134"}


id: FYPO:0003898
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cells grow normally (i.e. indistinguishably from wild type) in a medium containing glycerol and ethanol as the carbon sources.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0002060","FYPO:0002057","FYPO:0000003","FYPO:0002058","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on glycerol/ethanol carbon source","synonyms":[{"name":"normal cell population growth on glycerol/ethanol carbon source","type":"exact"},{"name":"normal vegetative cell population growth on glycerol/ethanol carbon source","type":"exact"}],"termid":"FYPO:0003898"}


id: PBO:0013745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxymethylbilane synthase Hem3 (predicted)","termid":"PBO:0013745"}


id: PBO:0062343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily K member 2","termid":"PBO:0062343"}


id: FYPO:0004389
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more amino acid catabolism RNAs measured in a cell is higher than normal (i.e. higher than observed in wild-type cells). Amino acid catabolism RNAs are transcribed from genes whose products are involved in amino acid catabolism.","definition_xrefs":["PMID:23695302","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of amino acid metabolism gene mRNA during vegetative growth","termid":"FYPO:0002743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"increased level of amino acid catabolism gene mRNA during vegetative growth","synonyms":[{"name":"increased amino acid catabolism gene mRNA accumulation during vegetative growth","type":"related"},{"name":"increased level of amino acid catabolism gene RNA during vegetative growth","type":"exact"},{"name":"increased level of amino acid catabolism gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of amino acid catabolism gene transcripts during vegetative growth","type":"exact"}],"termid":"FYPO:0004389"}


id: MONDO:0002928
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant tumor composed of a mixture of carcinomatous and sarcomatous elements.","definition_xrefs":["NCIT:C34448"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant mixed neoplasm","termid":"MONDO:0005853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"carcinosarcoma","secondary_identifiers":["UMLS:C0007140","ICDO:8980/3","MESH:D002296","MEDGEN:2876","DOID:4236"],"synonyms":[{"name":"MMMT","type":"exact"},{"name":"carcinosarcoma","type":"exact"},{"name":"carcinosarcoma, malignant","type":"exact"},{"name":"malignant mixed Mullerian tumor","type":"exact"},{"name":"malignant mixed Mullerian tumour","type":"exact"},{"name":"malignant mixed mesodermal (mullerian) tumor","type":"exact"},{"name":"malignant mixed mesodermal (mullerian) tumour","type":"exact"},{"name":"mesodermal mixed tumor","type":"exact"},{"name":"mesodermal mixed tumor (morphologic abnormality)","type":"exact"},{"name":"mesodermal mixed tumour","type":"exact"},{"name":"mesodermal mixed tumour (morphologic abnormality)","type":"exact"},{"name":"mixed Mullerian tumor","type":"related"},{"name":"mixed Mullerian tumour","type":"related"},{"name":"mixed mesodermal (mullerian) tumor","type":"exact"},{"name":"mixed mesodermal (mullerian) tumour","type":"exact"},{"name":"mixed tumor, Mullerian","type":"related"},{"name":"mullerian mixed tumor","type":"exact"},{"name":"mullerian mixed tumor (morphologic abnormality)","type":"exact"},{"name":"mullerian mixed tumour","type":"exact"},{"name":"mullerian mixed tumour (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0002928","xrefs":{"Monarch":{"xref_id":"0002928"}}}


id: PBO:0089628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADHX epimerase","termid":"PBO:0089628"}


id: MONDO:0007584
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Exostoses-anetodermia-brachydactyly type E syndrome is an association reported in a single kindred characterized by the variable presence of the following features: anetodermia (macular atrophy of the skin), multiple exostoses, and brachydactyly type E. There have been no further descriptions in the literature since 1985.","definition_xrefs":["Orphanet:1962"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with disorganized development of skeletal components (obsolete MONDO:0019708)","termid":"MONDO:0019708"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exostoses-anetodermia-brachydactyly type E syndrome","secondary_identifiers":["MESH:C565034","MEDGEN:338695","GARD:2202","UMLS:C1851428","OMIM:133690"],"synonyms":[{"name":"exostoses with anetodermia and brachydactyly, type E","type":"related"}],"termid":"MONDO:0007584","xrefs":{"Monarch":{"xref_id":"0007584"}}}


id: PBO:0041998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 47","termid":"PBO:0041998"}


id: PR:P36590
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A thymidylate kinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO05042","PRO:DNx","PANTHER:PTHR10344:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymidylate kinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC70.07c","secondary_identifiers":["UniProtKB:P36590"],"synonyms":[{"name":"Spom972h-DTYMK","type":"exact"},{"name":"dTMP kinase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P36590"}


id: PBO:0065168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline dehydrogenase 1","termid":"PBO:0065168"}


id: GO:0021741
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the spinal trigeminal nucleus over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph","GOC:curators","GO_REF:0000021","GOC:dgh","GOC:jid","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trigeminal sensory nucleus development","termid":"GO:0021730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spinal trigeminal nucleus development","termid":"GO:0021741"}


id: MONDO:1011927
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder, non-human animal","termid":"MONDO:0700104"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary adenomatosis, non-human animal","secondary_identifiers":["OMIA:000840"],"termid":"MONDO:1011927","xrefs":{"Monarch":{"xref_id":"1011927"}}}


id: PBO:0030168
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cell_lysis","termid":"PBO:0030168"}


id: GO:0099172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a presynapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"},{"relation_name":"part_of","term_name":"synapse organization","termid":"GO:0050808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"presynapse organization","synonyms":[{"name":"presynapse development","type":"exact"},{"name":"presynapse morphogenesis","type":"related"},{"name":"presynapse organisation","type":"exact"},{"name":"presynapse organization and biogenesis","type":"related"}],"termid":"GO:0099172"}


id: PBO:0053549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 556","termid":"PBO:0053549"}


id: GO:0003290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which anatomical structure of an atrial septum secundum is generated and organized.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrial septum morphogenesis","termid":"GO:0060413"},{"relation_name":"part_of","term_name":"septum secundum development","termid":"GO:0003285"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrial septum secundum morphogenesis","termid":"GO:0003290"}


id: PR:O13972
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine hydroxymethyltransferase, cytosolic that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01280","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine hydroxymethyltransferase, cytosolic (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24C9.12c","secondary_identifiers":["UniProtKB:O13972"],"synonyms":[{"name":"SHMT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SHMT1","type":"exact"},{"name":"glycine hydroxymethyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"serine methylase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13972"}


id: PBO:0079798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 2 member B7","termid":"PBO:0079798"}


id: PBO:0083756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential evolutionarily conserved nucleolar protein; necessary for biogenesis of 60S ribosomal subunits and for processing of pre-rRNAs to mature rRNA; associated with several distinct 66S pre-ribosomal particles","termid":"PBO:0083756"}


id: GO:1902535
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A membrane invagination which involves another organism.","definition_xrefs":["GOC:TermGenie","GOC:bf","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism membrane invagination (obsolete GO:1902535)","termid":"GO:1902535"}


id: PBO:0070630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 1","termid":"PBO:0070630"}


id: PBO:0080657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WAP four-disulfide core domain 1","termid":"PBO:0080657"}


id: GO:0060872
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the semicircular canal from its initial formation to the mature structure.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube development","termid":"GO:0035295"},{"relation_name":"part_of","term_name":"inner ear development","termid":"GO:0048839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"semicircular canal development","termid":"GO:0060872"}


id: PBO:0081052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCHC-type containing 10","termid":"PBO:0081052"}


id: PR:Q10259
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A signal peptidase complex subunit 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DAN","PANTHER:PTHR12804:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microsomal signal peptidase subunit 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC56F8.11","secondary_identifiers":["UniProtKB:Q10259"],"synonyms":[{"name":"SPAC56F8.11","type":"related"},{"name":"Spom972h-SPCS3","type":"exact"}],"termid":"PR:Q10259"}


id: MONDO:0008561
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thumb deformity","secondary_identifiers":["HP:0001172","MEDGEN:107901","MESH:C536903","UMLS:C0575897","OMIM:188100"],"synonyms":[{"name":"thumb absent or hypoplastic","type":"related"},{"name":"thumb deformity","type":"exact"},{"name":"thumb deformity (disease)","type":"exact"},{"name":"thumb hypoplastic","type":"related"}],"termid":"MONDO:0008561","xrefs":{"Monarch":{"xref_id":"0008561"}}}


id: GO:0031590
data:
  {"annotated_genes":["SJAG_05334","SJAG_04735","SJAG_04265","SJAG_01261"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96516,76617,74142,75429],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031591"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving wybutosine, 3H-imidazo[1,2-alpha]purine-7-butanoic acid, 4,9-dihydro- alpha-[(methoxycarbonyl)amino]- 4,6-dimethyl-9-oxo- 3-beta-D-ribofuranosyl methyl ester, a modified nucleoside found in some tRNA molecules.","definition_xrefs":["RNAmods:037","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosyl compound metabolic process","termid":"GO:1901657"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01261":null,"SJAG_04265":null,"SJAG_04735":null,"SJAG_05334":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"wybutosine metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"wybutosine metabolism","type":"exact"},{"name":"yW metabolic process","type":"exact"},{"name":"yW metabolism","type":"exact"}],"termid":"GO:0031590","terms_by_termid":{"GO:0031591":null}}


id: FYPO:0003164
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which nuclease activity is absent. All nuclease activities may be absent, or a specific nuclease activity may be assayed.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal nuclease activity","termid":"FYPO:0003163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000661","FYPO:0000707","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"abolished nuclease activity","synonyms":[{"name":"nuclease activity abolished","type":"exact"}],"termid":"FYPO:0003164"}


id: GO:0110040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the nematode pharynx are generated and organized.","definition_xrefs":["PMID:20805556","GOC:rz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nematode pharynx morphogenesis","termid":"GO:0110040"}


id: GO:0051125
data:
  {"annotated_genes":["SJAG_03455"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76246],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034316"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of actin nucleation, the initial step in the formation of an actin filament in which actin monomers combine to form a new filament.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin filament organization","termid":"GO:0110053"},{"relation_name":"regulates","term_name":"actin nucleation","termid":"GO:0045010"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03455":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0030036","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"regulation of actin nucleation","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0051125","terms_by_termid":{"GO:0034316":null}}


id: PBO:0089832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GEF Vps901","termid":"PBO:0089832"}


id: PBO:0089128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces japonicus specific protein/dubious","termid":"PBO:0089128"}


id: MONDO:0019907
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ring chromosome 13 is a chromosomal anomaly of chromosome 13 characterized by a widely variable phenotype (ranging from mild to severe) principally characterized by intrauterine growth retardation, developmental delay, short stature, moderate to severe intellectual deficit, microcephaly, facial dysmorphism (i.e. upslanting palpebral fissures, hypertelorism, abnormal ears, broad nasal bridge, high arched palate, micrognathia, small mouth, and thin lips), hands and feet anomalies, and genital abnormalities. Additional features reported include behavioral problems, hearing and speech disorders, congenital heart defects, cerebral malformations, and anal atresia.","definition_xrefs":["Orphanet:96176"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"chromosome 13 disorder","termid":"MONDO:0700020"},{"relation_name":"is_a","term_name":"ring chromosome disorder","termid":"MONDO:0700091"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring chromosome 13","secondary_identifiers":["SCTID:726723004","MEDGEN:444146","UMLS:C2931808","GARD:6069","MESH:C538303"],"synonyms":[{"name":"R13","type":"related"},{"name":"Ring 13","type":"related"},{"name":"Ring chromosome 13 syndrome","type":"related"},{"name":"Ring chromosome type 13","type":"exact"},{"name":"chromosome 13 ring","type":"related"}],"termid":"MONDO:0019907","xrefs":{"Monarch":{"xref_id":"0019907"}}}


id: MONDO:0010131
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, autosomal recessive inherited disorder usually caused by mutations in the THRB gene. It is characterized by a defective physiological resistance to thyroid hormones, resulting in the elevation of thyroxin and triiodothyronine in the serum.","definition_xrefs":["NCIT:C85191"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic genetic hearing loss (obsolete MONDO:0019589)","termid":"MONDO:0019589"},{"relation_name":"is_a","term_name":"generalized resistance to thyroid hormone","termid":"MONDO:0009043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"thyroid hormone resistance, generalized, autosomal recessive","secondary_identifiers":["UMLS:C3489796","OMIM:274300","NANDO:2100121","MESH:C567936","MEDGEN:483749","NANDO:1200395","HGNC:11799","NANDO:2200341"],"synonyms":[{"name":"GRTH","type":"related"},{"name":"Gthr","type":"related"},{"name":"Refetoff syndrome","type":"related"},{"name":"THRB","type":"related"},{"name":"thyroid hormone receptor BETA","type":"related"},{"name":"thyroid hormone resistance","type":"broad"},{"name":"thyroid hormone resistance syndrome","type":"broad"},{"name":"thyroid hormone resistance, autosomal recessive","type":"exact"},{"name":"thyroid hormone resistance, generalized, autosomal recessive","type":"exact"},{"name":"thyroid hormone unresponsiveness","type":"related"}],"termid":"MONDO:0010131","xrefs":{"Monarch":{"xref_id":"0010131"}}}


id: MONDO:1012486
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spinal intradural arachnoid cyst, non-human animal","termid":"MONDO:1011892"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinal intradural arachnoid cyst, dog","secondary_identifiers":["OMIA:001923-9615"],"termid":"MONDO:1012486","xrefs":{"Monarch":{"xref_id":"1012486"}}}


id: PBO:0064330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLS3 antisense RNA 1","termid":"PBO:0064330"}


id: PBO:0066657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal oxygenase 1","termid":"PBO:0066657"}


id: GO:0046984
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of hemoglobin, an oxygen carrying, conjugated protein containing four heme groups and globin.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macromolecule biosynthetic process","termid":"GO:0010556"},{"relation_name":"is_a","term_name":"regulation of protein metabolic process","termid":"GO:0051246"},{"relation_name":"regulates","term_name":"hemoglobin biosynthetic process","termid":"GO:0042541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hemoglobin biosynthetic process","synonyms":[{"name":"regulation of haemoglobin biosynthesis","type":"exact"},{"name":"regulation of haemoglobin biosynthetic process","type":"exact"},{"name":"regulation of hemoglobin anabolism","type":"exact"},{"name":"regulation of hemoglobin biosynthesis","type":"exact"},{"name":"regulation of hemoglobin formation","type":"exact"},{"name":"regulation of hemoglobin synthesis","type":"exact"}],"termid":"GO:0046984"}


id: PBO:0058087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4304","termid":"PBO:0058087"}


id: PR:O14219
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC6B12.14c gene.","definition_xrefs":["UniProtKB:O14219","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C6B12.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6B12.14c","synonyms":[{"name":"Spom972h-SPAC6B12.14c","type":"exact"}],"termid":"PR:O14219"}


id: MONDO:0100012
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the outer layer of the tendon (paratenon) alone, whether or not the paratenon is lined by synovium.","definition_xrefs":["PMID:14560540"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tendinitis","termid":"MONDO:0004857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"paratenonitis","termid":"MONDO:0100012","xrefs":{"Monarch":{"xref_id":"0100012"}}}


id: PBO:0025422
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino acid metabolism disorders","termid":"PBO:0025422"}


id: GO:0075068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The increase in size or mass of symbiont, or the progression of the symbiont from an initial condition to a later condition, occurring in its host's vascular tissue. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete growth or development of symbiont in host vascular tissue (obsolete GO:0075068)","synonyms":[{"name":"growth or development of symbiont in host vascular tissue","type":"exact"}],"termid":"GO:0075068"}


id: MONDO:0800406
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited retinopathy caused by bi-allelic variants in the ABCA4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"ABCA4-related retinopathy","termid":"MONDO:0800406","xrefs":{"Monarch":{"xref_id":"0800406"}}}


id: MONDO:0004748
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the lip.","direct_ancestors":[{"relation_name":"is_a","term_name":"mouth disorder","termid":"MONDO:0006858"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lip disorder","secondary_identifiers":["ICD9:528.5","MESH:D008047","DOID:9297","MEDGEN:44166","NCIT:C26818","UMLS:C0023760","SCTID:90678009"],"synonyms":[{"name":"disease of lip","type":"exact"},{"name":"disease of lips","type":"exact"},{"name":"disease or disorder of lip","type":"exact"},{"name":"disorder of lip","type":"exact"},{"name":"lip disease","type":"exact"},{"name":"lip disease or disorder","type":"exact"},{"name":"lip disorder","type":"exact"}],"termid":"MONDO:0004748","xrefs":{"Monarch":{"xref_id":"0004748"}}}


id: PBO:0028065
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transcriptional_response_to_pheromone","termid":"PBO:0028065"}


id: GO:0048244
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + O2 + phytanoyl-CoA = 2-hydroxyphytanoyl-CoA + CO2 + succinate.","definition_xrefs":["RHEA:16065","EC:1.14.11.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"phytanoyl-CoA dioxygenase activity","secondary_identifiers":["KEGG_REACTION:R05722","MetaCyc:1.14.11.18-RXN","Reactome:R-HSA-389639"],"synonyms":[{"name":"phytanoyl-CoA 2 oxoglutarate dioxygenase activity","type":"related"},{"name":"phytanoyl-CoA 2-hydroxylase activity","type":"related"},{"name":"phytanoyl-CoA alpha-hydroxylase activity","type":"related"},{"name":"phytanoyl-CoA hydroxylase activity","type":"related"},{"name":"phytanoyl-CoA, 2-oxoglutarate:oxygen oxidoreductase (2-hydroxylating)","type":"related"}],"termid":"GO:0048244"}


id: PR:Q9P774
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03160","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor ATP-dependent RNA helicase prp16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1711.17","secondary_identifiers":["UniProtKB:Q9P774"],"synonyms":[{"name":"Spom972h-DHX38","type":"exact"}],"termid":"PR:Q9P774"}


id: SO:0001538
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant which alters the functioning of a transcript with respect to a reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"functionally_abnormal","termid":"SO:0002218"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcript_function_variant","synonyms":[{"name":"transcript function variant","type":"exact"}],"termid":"SO:0001538"}


id: FYPO:0003051
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome pairing during meiosis (synapsis) is normal (i.e. indistinguishable from wild type) at a cis-acting homologous chromosome pairing region such as the omt3 locus on chromosome 1 or the sme2 locus on chromosome 2.","definition_xrefs":["PomBase:mah","PMID:24173580","PMID:22582262","PMID:23117617"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal homologous chromosome pairing","termid":"FYPO:0003050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal homologous chromosome pairing at cis-acting homologous chromosome pairing region","synonyms":[{"name":"normal homologous chromosome pairing at meiosis at cis-acting homologous chromosome pairing region","type":"exact"},{"name":"normal synapsis at cis-acting homologous chromosome pairing region","type":"exact"}],"termid":"FYPO:0003051"}


id: GO:0102048
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indole-3-acetate + L-isoleucine + ATP(4-) = H+ + indole-3-acetyl-isoleucine + AMP(2-) + diphosphoric acid.","definition_xrefs":["GOC:pz","PMID:15659623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"indole-3-acetyl-isoleucine synthetase activity","secondary_identifiers":["MetaCyc:RXN-10430"],"termid":"GO:0102048"}


id: MONDO:0004586
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Rheumatoid lung disease is a group of lung problems related to rheumatoid arthritis.","definition_xrefs":["PMID:17684286"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung disorder","termid":"MONDO:0005275"},{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"rheumatoid lung disease","secondary_identifiers":["SCTID:398726004","DOID:849","UMLS:C0994344","MEDGEN:681135","ICD9:714.81"],"synonyms":[{"name":"rheumatoid lung","type":"exact"}],"termid":"MONDO:0004586","xrefs":{"Monarch":{"xref_id":"0004586"}}}


id: GO:0004414
data:
  {"annotated_genes":["SJAG_00395"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78084],"is_not":false,"summary":null,"term":"GO:0004414"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-homoserine + acetyl-CoA = O-acetyl-L-homoserine + CoA.","definition_xrefs":["EC:2.3.1.31","RHEA:13701"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00395":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"homoserine O-acetyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R01776","MetaCyc:HOMOSERINE-O-ACETYLTRANSFERASE-RXN"],"synonyms":[{"name":"L-homoserine O-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:L-homoserine O-acetyltransferase activity","type":"related"},{"name":"homoserine O-trans-acetylase activity","type":"related"},{"name":"homoserine acetyltransferase activity","type":"related"},{"name":"homoserine transacetylase activity","type":"broad"},{"name":"homoserine-O-transacetylase activity","type":"related"}],"termid":"GO:0004414","terms_by_termid":{"GO:0004414":null}}


id: GO:1902068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sphingolipid signaling.","definition_xrefs":["GOC:TermGenie","PMID:20870412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"sphingolipid mediated signaling pathway","termid":"GO:0090520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of sphingolipid mediated signaling pathway","synonyms":[{"name":"regulation of sphingolipid signaling pathway","type":"related"}],"termid":"GO:1902068"}


id: MOD:01933
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links four L-lysine residues to form desmosine.","definition_xrefs":["ChEBI:37629","PubMed:14109939","PubMed:14109938","PubMed:5839176","PubMed:13941623","RESID:AA0587"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridinyl ring crosslinked residues","termid":"MOD:01425"},{"relation_name":"is_a","term_name":"crosslinked L-lysine residue","termid":"MOD:02051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desmosine","synonyms":[{"name":"4-[(4S)-4-amino-4-carboxybutyl]-1-[(5S)-5-amino-5-carboxypentyl]-3,5-bis[(3S)-3-amino-3-carboxypropyl]pyridinium","type":"exact"},{"name":"6-[4-(4-amino-4-carboxybutyl)-3,5-bis(3-amino-3-carboxypropyl)pyridinio]norleucine","type":"exact"},{"name":"desmosine","type":"exact"}],"termid":"MOD:01933"}


id: PBO:0035895
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_mitotic_spindle_pole_body_during_mitosis","termid":"PBO:0035895"}


id: GO:0001659
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process in which an organism modulates its internal body temperature.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal-level homeostasis","termid":"GO:0048871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"temperature homeostasis","secondary_identifiers":["Wikipedia:Thermoregulation"],"synonyms":[{"name":"thermoregulation","type":"exact"}],"termid":"GO:0001659"}


id: PBO:0069560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 832, pseudogene","termid":"PBO:0069560"}


id: PBO:0051779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif containing B2 pseudogene","termid":"PBO:0051779"}


id: MONDO:0019127
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare idiopathic inflammatory myopathy characterized by symmetric proximal muscle weakness and elevated muscle enzymes.","definition_xrefs":["Orphanet:732"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"is_a","term_name":"acquired idiopathic inflammatory myopathy","termid":"MONDO:0020122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"polymyositis","secondary_identifiers":["UMLS:C0085655","EFO:0003063","icd11.foundation:1157134196","ICD9:710.4","ICD10CM:M33.2","MedDRA:10036102","NANDO:1200276","Wikipedia:Polymyositis","GARD:7425","MESH:D017285","MEDGEN:39086","NCIT:C26925","SCTID:31384009","DOID:0080745"],"synonyms":[{"name":"PM","type":"exact"},{"name":"polymyositis","type":"exact"}],"termid":"MONDO:0019127","xrefs":{"Monarch":{"xref_id":"0019127"}}}


id: PBO:0026851
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_chromatin_at_ncRNA_gene","termid":"PBO:0026851"}


id: PBO:0090990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, glycine Hem25","termid":"PBO:0090990"}


id: SO:0001176
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Non-base-paired sequence of nucleotide bases in tRNA. It contains several dihydrouracil residues.","definition_xrefs":["ISBN:071671920"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_region","termid":"SO:0001172"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DHU_loop","synonyms":[{"name":"D loop","type":"related"},{"name":"DHU loop","type":"exact"}],"termid":"SO:0001176"}


id: PBO:0031244
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromatin_silencing_by_small_RNA","termid":"PBO:0031244"}


id: PBO:0086815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YLR156W, YLR159W, and YLR161W are three identical open reading frames in S288C encoded near the ribosomal DNA region of chromosome 12; YLR159W has a paralog, YLR156W, that arose from a segmental duplication","termid":"PBO:0086815"}


id: PBO:0065948
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id: PBO:0077785
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA topoisomerase II alpha","termid":"PBO:0077785"}


id: MONDO:0003123
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  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete multiple system atrophy (obsolete MONDO:0003123)","termid":"MONDO:0003123","xrefs":{"Monarch":{"xref_id":"0003123"}}}


id: PBO:0018095
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEA/Iml1/Npr2/3 complex subunit Npr3 (predicted)","termid":"PBO:0018095"}


id: PBO:0003735
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic thiouridylase subunit Ctu2","termid":"PBO:0003735"}


id: MONDO:0001274
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"anus disorder","termid":"MONDO:0002519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"anal spasm","secondary_identifiers":["UMLS:C0152167","icd11.foundation:647005938","ICD9:564.6","MEDGEN:508910","SCTID:17440005","DOID:11374","ICD10CM:K59.4"],"termid":"MONDO:0001274","xrefs":{"Monarch":{"xref_id":"0001274"}}}


id: FYPO:0002155
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which chromosome structure is normal (i.e. indistinguishable from wild type) at the telomeric regions. Telomere structure refers to the position, shape, arrangement and connectivity of DNA and associated proteins in the telomeric region.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal telomere morphology during vegetative growth","termid":"FYPO:0006513"},{"relation_name":"is_a","term_name":"normal telomere structure","termid":"FYPO:0006514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal telomere structure during vegetative growth","synonyms":[{"name":"normal chromosome structure at telomere during vegetative growth","type":"exact"},{"name":"normal chromosome structure at telomeric region during vegetative growth","type":"exact"},{"name":"normal telomere structure during mitotic cell cycle","type":"related"},{"name":"normal telomeric region structure during vegetative growth","type":"exact"}],"termid":"FYPO:0002155"}


id: PBO:0027243
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_polyadenylated_5S_rRNA_level","termid":"PBO:0027243"}


id: PBO:0061934
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily L member 6","termid":"PBO:0061934"}


id: FYPO:0007531
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which dimethylation of lysine at position 9 of histone H3 is decreased at heterochromatin islands near genes that are normally expressed during the meiotic cell cycle.","definition_xrefs":["PMID:22144463","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K9 dimethylation at heterochromatin island during vegetative growth","termid":"FYPO:0007213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002274","FYPO:0005447","FYPO:0000002","FYPO:0002494","FYPO:0001320"],"is_obsolete":false,"name":"decreased histone H3-K9 dimethylation at heterochromatin island at meiotic gene during vegetative growth","synonyms":[{"name":"decreased histone H3 K9 dimethylation at heterochromatin island at meiotic gene during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at heterochromatin island at meiosis gene during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at heterochromatin island at meiotic gene during mitotic cell cycle","type":"related"},{"name":"decreased histone H3K9 dimethylation at heterochromatin island at meiotic gene during vegetative growth","type":"exact"},{"name":"decreased histone H3K9me2 at heterochromatin island at meiotic gene during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 dimethylation at heterochromatin island at meiotic gene during vegetative growth","type":"exact"}],"termid":"FYPO:0007531"}


id: PBO:0057105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 196a-2","termid":"PBO:0057105"}


id: MONDO:0010029
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital condition in which there is complete right-to-left reversal of the position of the major thoracic and abdominal organs (that is, they are arranged in a mirror image of the normal positioning).","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"visceral heterotaxy","termid":"MONDO:0018677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"situs inversus","secondary_identifiers":["UMLS:C4551493","MEDGEN:1642262","icd11.foundation:797648408","MESH:D012857","GARD:4883","NCIT:C87121","ICD10CM:Q89.3","ICD9:759.3","DOID:758","ICD9:759.89","HP:0001696","Orphanet:101063","SCTID:24614000"],"synonyms":[{"name":"complete situs inversus","type":"exact"},{"name":"complete situs inversus viscerum","type":"exact"},{"name":"complete transposition (morphologic abnormality)","type":"exact"},{"name":"laterality sequence","type":"exact"},{"name":"situs ambiguus","type":"related"},{"name":"situs inversus","type":"exact"},{"name":"situs inversus totalis","type":"exact"},{"name":"situs inversus totalis (disease)","type":"exact"}],"termid":"MONDO:0010029","xrefs":{"Monarch":{"xref_id":"0010029"}}}


id: PBO:0074409
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 12","termid":"PBO:0074409"}


id: PR:P87124
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC3A12.08 gene.","definition_xrefs":["UniProtKB:P87124","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C3A12.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A12.08","synonyms":[{"name":"Spom972h-SPAC3A12.08","type":"exact"}],"termid":"PR:P87124"}


id: GO:0052448
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration by an organism of the levels of ethylene in the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of ethylene levels in symbiont (obsolete GO:0052448)","synonyms":[{"name":"modulation by organism of ethylene levels in symbiont","type":"exact"}],"termid":"GO:0052448"}


id: PBO:0074423
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 22","termid":"PBO:0074423"}


id: PR:O74881
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An inhibitor of Bruton tyrosine kinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04198","PANTHER:PTHR22872:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB/POZ domain-containing protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC330.11","secondary_identifiers":["UniProtKB:O74881"],"synonyms":[{"name":"Spom972h-IBTK","type":"exact"}],"termid":"PR:O74881"}


id: MONDO:0016867
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndrome caused by partial chromosomal deletion","termid":"MONDO:0000761"},{"relation_name":"is_a","term_name":"chromosome 2 disorder","termid":"MONDO:0700009"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial deletion of chromosome 2","secondary_identifiers":["UMLS:C5679650","GARD:20790","MEDGEN:1825960","Orphanet:261771"],"synonyms":[{"name":"partial deletion of chromosome type 2","type":"exact"},{"name":"partial monosomy of chromosome 2","type":"exact"}],"termid":"MONDO:0016867","xrefs":{"Monarch":{"xref_id":"0016867"}}}


id: PBO:0005869
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating-type m-specific polypeptide Mi","termid":"PBO:0005869"}


id: GO:0035981
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a tongue muscle cell.","definition_xrefs":["CL:0002673","PMID:3393851","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal muscle fiber differentiation","termid":"GO:0098528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tongue muscle cell differentiation","termid":"GO:0035981"}


id: PBO:0004945
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-N-acetylglucosamine diphosphorylase Uap1/Qri1(predicted)","termid":"PBO:0004945"}


id: MONDO:0015278
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  {"annotated_genes":["SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87624],"is_not":false,"summary":null,"term":"MONDO:0015278"}]},"cv_name":"mondo","definition":"Familial pancreatic carcinoma is defined by the presence of pancreatic cancer (PC) in two or more first-degree relatives.","definition_xrefs":["Orphanet:1333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"exocrine pancreatic carcinoma","termid":"MONDO:0005192"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"familial pancreatic carcinoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C2931038","SCTID:715414009","MESH:C535837","OMIM:260350","icd11.foundation:1385362916","GARD:4206","MEDGEN:419700","NCIT:C43298"],"synonyms":[{"name":"familial pancreatic cancer","type":"exact"},{"name":"familial pancreatic carcinoma","type":"exact"},{"name":"hereditary exocrine pancreatic carcinoma","type":"exact"},{"name":"hereditary pancreatic cancer","type":"exact"},{"name":"hereditary pancreatic carcinoma","type":"exact"},{"name":"pancreatic acinar carcinoma","type":"related"},{"name":"pancreatic cancer, somatic","type":"exact"},{"name":"pancreatic carcinoma, somatic","type":"exact"}],"termid":"MONDO:0015278","terms_by_termid":{"MONDO:0015278":null},"xrefs":{"Monarch":{"xref_id":"0015278"}}}


id: PATO:0001887
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  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's disposition to having a strong affinity for water; tending to dissolve in, mix with, or be wetted by water.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrophilicity","termid":"PATO:0001886"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrophilic","termid":"PATO:0001887"}


id: GO:0050270
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-homocysteine + H2O + H+ = S-inosyl-L-homocysteine + NH4.","definition_xrefs":["EC:3.5.4.28","RHEA:20716"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016810","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"S-adenosylhomocysteine deaminase activity","secondary_identifiers":["KEGG_REACTION:R00193","MetaCyc:S-ADENOSYLHOMOCYSTEINE-DEAMINASE-RXN"],"synonyms":[{"name":"S-adenosyl-L-homocysteine aminohydrolase activity","type":"related"},{"name":"adenosylhomocysteine deaminase activity","type":"related"}],"termid":"GO:0050270"}


id: MONDO:0000689
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete survival motor neuron spinal muscular atrophy (obsolete MONDO:0000689)","termid":"MONDO:0000689","xrefs":{"Monarch":{"xref_id":"0000689"}}}


id: PBO:0030911
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cellular_physical_quality_phenotype_during_vegetative_growth","termid":"PBO:0030911"}


id: MONDO:0012489
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any early-onset non-syndromic cataract in which the cause of the disease is a mutation in the CRYBA4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset non-syndromic cataract","termid":"MONDO:0011060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 23","secondary_identifiers":["DOID:0110271","UMLS:C3808012","MEDGEN:814342","OMIM:610425"],"synonyms":[{"name":"CRYBA4 early-onset non-syndromic cataract","type":"exact"},{"name":"CTRCT23","type":"exact"},{"name":"cataract 23","type":"exact"},{"name":"cataract 23, lamellar","type":"related"},{"name":"cataract 23, multiple types","type":"related"},{"name":"cataract 23, multiple types, with or without microcornea","type":"related"},{"name":"cataract type 23","type":"exact"},{"name":"early-onset non-syndromic cataract caused by mutation in CRYBA4","type":"exact"},{"name":"lamellar cataract 23","type":"exact"}],"termid":"MONDO:0012489","xrefs":{"Monarch":{"xref_id":"0012489"}}}


id: GO:0004207
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete effector caspase activity (obsolete GO:0004207)","synonyms":[{"name":"effector caspase activity","type":"exact"}],"termid":"GO:0004207"}


id: GO:0031440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mRNA 3'-end processing, any process involved in forming the mature 3' end of an mRNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA processing","termid":"GO:0050684"},{"relation_name":"regulates","term_name":"mRNA 3'-end processing","termid":"GO:0031124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016071","GO:0008150"],"is_obsolete":false,"name":"regulation of mRNA 3'-end processing","termid":"GO:0031440"}


id: GO:0006134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete dihydrobiopterin reduction (obsolete GO:0006134)","synonyms":[{"name":"dihydrobiopterin reduction","type":"exact"}],"termid":"GO:0006134"}


id: GO:0009939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of gibberellic acid mediated signaling activity.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gibberellic acid mediated signaling pathway","termid":"GO:0009937"},{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"positively_regulates","term_name":"gibberellic acid mediated signaling pathway","termid":"GO:0009740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of gibberellic acid mediated signaling pathway","synonyms":[{"name":"activation of gibberellic acid mediated signaling","type":"narrow"},{"name":"positive regulation of gibberellic acid mediated signalling","type":"exact"},{"name":"stimulation of gibberellic acid mediated signaling","type":"narrow"},{"name":"up regulation of gibberellic acid mediated signaling","type":"exact"},{"name":"up-regulation of gibberellic acid mediated signaling","type":"exact"},{"name":"upregulation of gibberellic acid mediated signaling","type":"exact"}],"termid":"GO:0009939"}


id: GO:0046545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the primary female sexual characteristics over time, from their formation to the mature structure. The primary female sexual characteristics are the ovaries, and they develop in response to sex hormone secretion.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"development of primary sexual characteristics","termid":"GO:0045137"},{"relation_name":"part_of","term_name":"female sex differentiation","termid":"GO:0046660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"development of primary female sexual characteristics","termid":"GO:0046545"}


id: PBO:0062401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 24","termid":"PBO:0062401"}


id: GO:0035609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of a C-terminal, gene-encoded glutamate residue from a protein.","definition_xrefs":["GOC:sp","PMID:21074048"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-terminal protein amino acid modification","termid":"GO:0018410"},{"relation_name":"is_a","term_name":"protein deglutamylation","termid":"GO:0035608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"C-terminal protein deglutamylation","synonyms":[{"name":"protein primary sequence deglutamylation","type":"exact"}],"termid":"GO:0035609"}


id: MONDO:0013421
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any classic complement early component deficiency in which the cause of the disease is a mutation in the C8B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"classic complement early component deficiency","termid":"MONDO:0000015"},{"relation_name":"is_a","term_name":"immunodeficiency due to a late component of complement deficiency","termid":"MONDO:0015700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"type II complement component 8 deficiency","secondary_identifiers":["DOID:0060302","HGNC:1353","GARD:10625","MEDGEN:462430","OMIM:613789","UMLS:C3151080"],"synonyms":[{"name":"C8 Beta deficiency","type":"related"},{"name":"C8 deficiency type II","type":"related"},{"name":"C8 deficiency, type 2","type":"related"},{"name":"C8 deficiency, type II","type":"exact"},{"name":"C8B classic complement early component deficiency","type":"exact"},{"name":"C8B deficiency","type":"related"},{"name":"C8D2","type":"related"},{"name":"Human complement C8-beta deficiency","type":"related"},{"name":"classic complement early component deficiency caused by mutation in C8B","type":"exact"},{"name":"complement component 8 deficiency type 2","type":"related"},{"name":"complement component 8 deficiency type II","type":"related"},{"name":"complement component 8 deficiency, type 2","type":"related"},{"name":"complement component 8 deficiency, type II","type":"related"},{"name":"complement component 8B deficiency","type":"related"}],"termid":"MONDO:0013421","xrefs":{"Monarch":{"xref_id":"0013421"}}}


id: MONDO:0002482
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm that arises in the area of the nipple.","definition_xrefs":["NCIT:C5212"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder","termid":"MONDO:0002051"},{"relation_name":"is_a","term_name":"breast neoplasm","termid":"MONDO:0021100"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nipple neoplasm","secondary_identifiers":["MEDGEN:205111","DOID:3003","UMLS:C1112166"],"synonyms":[{"name":"neoplasm of nipple","type":"exact"},{"name":"neoplasm of the nipple","type":"exact"},{"name":"nipple neoplasm","type":"exact"},{"name":"nipple neoplasm (disease)","type":"exact"},{"name":"nipple tumor","type":"exact"},{"name":"nipple tumour","type":"exact"},{"name":"tumor of nipple","type":"exact"},{"name":"tumor of the nipple","type":"exact"},{"name":"tumour of nipple","type":"exact"},{"name":"tumour of the nipple","type":"exact"}],"termid":"MONDO:0002482","xrefs":{"Monarch":{"xref_id":"0002482"}}}


id: PBO:0116324
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Extracellular Five-prime Nucleotidase","termid":"PBO:0116324"}


id: GO:0160013
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N6-(2-hydroxyisobutanoyl)-L-lysyl-[protein] + NAD+ = 2''-O-(2-hydroxyisobutanoyl)-ADP-D-ribose + L-lysyl-[protein] + nicotinamide.","definition_xrefs":["PMID:31328167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"NAD-dependent protein de-2-hydroxyisobutyrylase activity","secondary_identifiers":["RHEA:24364"],"termid":"GO:0160013"}


id: PATO:0001836
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer with some kind of aperture or opening that is blocked or clogged.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congested","termid":"PATO:0001836"}


id: MONDO:0004892
data:
  {"annotated_genes":["SJAG_04553","SJAG_03233"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87285],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032941"},{"annotations":[87831],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012154"}]},"cv_name":"mondo","definition":"A defect in the focusing of light on the retina as in astigmatism, myopia, or hyperopia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03233":null,"SJAG_04553":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"refractive error","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:9835","MESH:D012030","UMLS:C0034951","MEDGEN:20508","SCTID:39021009"],"termid":"MONDO:0004892","terms_by_termid":{"MONDO:0012154":null,"MONDO:0032941":null},"xrefs":{"Monarch":{"xref_id":"0004892"}}}


id: POMBASE_GENE_EX_REL:in_presence_of
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"a substance is present","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_presence_of","termid":"POMBASE_GENE_EX_REL:in_presence_of"}


id: PBO:0090335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5' to 3' DNA helicase Pif1/Pfh1","termid":"PBO:0090335"}


id: PBO:0050783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxytryptamine receptor 2A","termid":"PBO:0050783"}


id: PBO:0053467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 430","termid":"PBO:0053467"}


id: GO:0010240
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A plastid complex that carries out the oxidative decarboxylation of pyruvate to form acetyl-CoA; comprises subunits possessing three catalytic activities: pyruvate dehydrogenase (E1), dihydrolipoamide S-acetyltransferase (E2), and dihydrolipoamide dehydrogenase (E3). This complex is found in plant plastids and is distinct from the one found in mitochondria.","definition_xrefs":["PMID:9393637","GOC:mtg_sensu"],"gene_count":0,"genotype_count":0,"name":"obsolete plastid pyruvate dehydrogenase complex (obsolete GO:0010240)","synonyms":[{"name":"dehydrogenase complex","type":"broad"}],"termid":"GO:0010240"}


id: PR:P34068
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An M-factor precursor mfm1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["UniProtKB:P34068","PRO:MSY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"M-factor precursor mfm1","termid":"PR:000025003"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M-factor precursor mfm1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB8E5.05","synonyms":[{"name":"Spom972h-mfm1","type":"exact"}],"termid":"PR:P34068"}


id: GO:1904626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glycine secretion, neurotransmission.","definition_xrefs":["PMID:22988142","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of neurotransmitter secretion","termid":"GO:0001956"},{"relation_name":"is_a","term_name":"positive regulation of organic acid transport","termid":"GO:0032892"},{"relation_name":"is_a","term_name":"positive regulation of amino acid transport","termid":"GO:0051957"},{"relation_name":"is_a","term_name":"positive regulation of synaptic transmission, glycinergic","termid":"GO:0060094"},{"relation_name":"is_a","term_name":"regulation of glycine secretion, neurotransmission","termid":"GO:1904624"},{"relation_name":"positively_regulates","term_name":"glycine secretion, neurotransmission","termid":"GO:0061537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"positive regulation of glycine secretion, neurotransmission","synonyms":[{"name":"activation of glycine secretion, neurotransmission","type":"narrow"},{"name":"up regulation of glycine secretion, neurotransmission","type":"exact"},{"name":"up-regulation of glycine secretion, neurotransmission","type":"exact"},{"name":"upregulation of glycine secretion, neurotransmission","type":"exact"}],"termid":"GO:1904626"}


id: MOD:00579
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other","definition_xrefs":["Unimod:256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Unimod","termid":"MOD:00003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"propionaldehyde +40","synonyms":[{"name":"Delta:H(4)C(3)","type":"related"},{"name":"Propionaldehyde +40","type":"related"}],"termid":"MOD:00579"}


id: PBO:0041956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil and C2 domain containing 2B","termid":"PBO:0041956"}


id: GO:1904750
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to nucleolus.","definition_xrefs":["GOC:nc","GOC:TermGenie","GOC:BHF","GOC:BHF_telomere","PMID:24415760","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein localization to nucleus","termid":"GO:1900181"},{"relation_name":"is_a","term_name":"regulation of protein localization to nucleolus","termid":"GO:1904749"},{"relation_name":"negatively_regulates","term_name":"protein localization to nucleolus","termid":"GO:1902570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to nucleolus","synonyms":[{"name":"down regulation of protein localisation in nucleolus","type":"exact"},{"name":"down regulation of protein localisation to nucleolus","type":"exact"},{"name":"down regulation of protein localization in nucleolus","type":"exact"},{"name":"down regulation of protein localization to nucleolus","type":"exact"},{"name":"down-regulation of protein localisation in nucleolus","type":"exact"},{"name":"down-regulation of protein localisation to nucleolus","type":"exact"},{"name":"down-regulation of protein localization in nucleolus","type":"exact"},{"name":"down-regulation of protein localization to nucleolus","type":"exact"},{"name":"downregulation of protein localisation in nucleolus","type":"exact"},{"name":"downregulation of protein localisation to nucleolus","type":"exact"},{"name":"downregulation of protein localization in nucleolus","type":"exact"},{"name":"downregulation of protein localization to nucleolus","type":"exact"},{"name":"inhibition of protein localisation in nucleolus","type":"narrow"},{"name":"inhibition of protein localisation to nucleolus","type":"narrow"},{"name":"inhibition of protein localization in nucleolus","type":"narrow"},{"name":"inhibition of protein localization to nucleolus","type":"narrow"},{"name":"negative regulation of protein localisation in nucleolus","type":"exact"},{"name":"negative regulation of protein localisation to nucleolus","type":"exact"},{"name":"negative regulation of protein localization in nucleolus","type":"exact"}],"termid":"GO:1904750"}


id: MONDO:0800417
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autism, susceptiblity to","termid":"MONDO:0020836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autism, susceptibility to, 4","secondary_identifiers":["MEDGEN:361812","UMLS:C1876176"],"synonyms":[{"name":"AUTS4","type":"exact"}],"termid":"MONDO:0800417","xrefs":{"Monarch":{"xref_id":"0800417"}}}


id: MONDO:0004744
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"glaucoma","termid":"MONDO:0005041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"borderline glaucoma","secondary_identifiers":["DOID:9283","ICD9:365.00","SCTID:193531003","UMLS:C1533674","MEDGEN:735885"],"synonyms":[{"name":"Preglaucoma","type":"exact"}],"termid":"MONDO:0004744","xrefs":{"Monarch":{"xref_id":"0004744"}}}


id: PBO:0040809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BICD1 antisense RNA 1","termid":"PBO:0040809"}


id: SO:1000078
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variation that decreases the rate a which transcription of the sequence occurs.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000078 sequence_variant_decreasing_rate_of_transcription (obsolete SO:1000078)","synonyms":[{"name":"mutation decreasing rate of transcription","type":"related"},{"name":"sequence variation decreasing rate of transcription","type":"exact"}],"termid":"SO:1000078"}


id: GO:0062179
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydroxylation of C-23 of any form of vitamin D.","definition_xrefs":["PMID:22100522","PMID:30205156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hydroxylase activity","termid":"GO:0008395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"vitamin D 23-hydroxylase activity","termid":"GO:0062179"}


id: FYPO:0000415
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of mitotic sister chromatid segregation is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid segregation","termid":"FYPO:0000141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000631","FYPO:0000337","FYPO:0005447"],"is_obsolete":false,"name":"decreased mitotic sister chromatid segregation","synonyms":[{"name":"chromosome segregation: decreased","type":"broad"},{"name":"decreased chromosome segregation during vegetative growth","type":"exact"},{"name":"decreased mitotic chromosome segregation","type":"exact"},{"name":"decreased sister chromatid segregation during mitotic cell cycle","type":"related"},{"name":"reduced mitotic sister chromatid segregation","type":"exact"}],"termid":"FYPO:0000415"}


id: FYPO:0005746
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of protein export from nucleus is decreased when the cell is subject to glucose starvation. Export of all proteins or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein export from nucleus","termid":"FYPO:0005745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein export from nucleus during glucose starvation","synonyms":[{"name":"decreased protein export from nucleus during cellular response to glucose starvation","type":"exact"},{"name":"decreased protein export from nucleus during glucose depletion","type":"exact"},{"name":"decreased protein export from nucleus during glucose deprivation","type":"exact"},{"name":"decreased protein export from nucleus during glucose limitation","type":"related"},{"name":"reduced protein export from nucleus during glucose starvation","type":"exact"}],"termid":"FYPO:0005746"}


id: PBO:0064217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLCB2 antisense RNA 1","termid":"PBO:0064217"}


id: PBO:0038663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA synthetase bubblegum family member 2","termid":"PBO:0038663"}


id: PBO:0058330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4704","termid":"PBO:0058330"}


id: PBO:0120305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNF130 antisense RNA 1","termid":"PBO:0120305"}


id: PBO:0038717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 12","termid":"PBO:0038717"}


id: MONDO:0000051
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete keratoderma, palmoplantar striate (obsolete MONDO:0000051)","termid":"MONDO:0000051","xrefs":{"Monarch":{"xref_id":"0000051"}}}


id: PBO:0091014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 Ubc6","termid":"PBO:0091014"}


id: FYPO:0007605
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which breakdown of the outer layer of the prospore membrane (forespore membrane; FSM) is decreased. Normally, the outer of the two FSM layers breaks down completely, producing a mature spore. When FSM breakdown does not occur normally, the outer FSM layers of two adjacent spores may be fused.","definition_xrefs":["PomBase:mah","PMID:33202882"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal prospore formation","termid":"FYPO:0000196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000631","FYPO:0000121"],"is_obsolete":false,"name":"decreased outer prospore membrane breakdown","synonyms":[{"name":"decreased outer forespore membrane breakdown","type":"exact"},{"name":"decreased outer membrane FSM breakdown","type":"exact"},{"name":"decreased outer prospore membrane degradation","type":"exact"},{"name":"reduced outer prospore membrane breakdown","type":"exact"}],"termid":"FYPO:0007605"}


id: PBO:0087846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Topoisomerase I; nuclear enzyme that relieves torsional strain in DNA by cleaving and re-sealing the phosphodiester backbone; relaxes both positively and negatively supercoiled DNA; functions in replication, transcription, and recombination; role in processing ribonucleoside monophosphates in genomic DNA into irreversible single-strand breaks; enzymatic activity and interaction with Nsr1p are negatively regulated by polyphosphorylation","termid":"PBO:0087846"}


id: PBO:0071932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4X pseudogene 9","termid":"PBO:0071932"}


id: MOD:01281
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["Unimod:118#S","PubMed:16335955"],"direct_ancestors":[{"relation_name":"is_a","term_name":"EDT-iodo-PEO-biotin","termid":"MOD:00490"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EDT-iodo-PEO-biotin - site S","synonyms":[{"name":"EDT-iodo-PEO-biotin","type":"related"},{"name":"EDT-iodoacetyl-PEO-biotin","type":"related"}],"termid":"MOD:01281"}


id: PBO:0034337
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-expresses","termid":"PBO:0034337"}


id: PATO:0000348
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000348 composition value (obsolete PATO:0000348)","termid":"PATO:0000348"}


id: MONDO:0023209
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"galactorrhea","termid":"MONDO:0009256"},{"relation_name":"is_a","term_name":"acquired hyperprolactinemia","termid":"MONDO:0024305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"galactorrhoea-hyperprolactinaemia","secondary_identifiers":["UMLS:C2930894","MESH:C535402","GARD:8400","MEDGEN:419279"],"synonyms":[{"name":"galactorrhea-hyperprolactinemia","type":"related"},{"name":"galactorrhoea-hyperprolactinaemia","type":"exact"},{"name":"hyperprolactinaemia","type":"related"}],"termid":"MONDO:0023209","xrefs":{"Monarch":{"xref_id":"0023209"}}}


id: MONDO:0016757
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Malignant triton tumor (MTT) is a rare aggressive subtype of malignant peripheral nerve sheath tumor (MPNST) characterized histopathologically by focal rhabdomyoblastic differentiation.","definition_xrefs":["Orphanet:252212"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant peripheral nerve sheath tumor","termid":"MONDO:0017827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant triton tumor","secondary_identifiers":["ICDO:9561/3","UMLS:C0334616","GARD:20743","NCIT:C4335","SCTID:404040002","MEDGEN:90816","DOID:6707","ICD9:171.9"],"synonyms":[{"name":"MPNST with rhabdomyoblastic differentiation","type":"exact"},{"name":"MPNST with rhabdomyosarcoma","type":"exact"},{"name":"MPNST with rhabdomyosarcomatous differentiation","type":"exact"},{"name":"MTT","type":"exact"},{"name":"malignant Triton tumor","type":"exact"},{"name":"malignant Triton tumour","type":"exact"},{"name":"malignant neoplasm of peripheral nerve sheath with rhabdomyosarcoma","type":"exact"},{"name":"malignant neoplasm of the peripheral nerve sheath with rhabdomyosarcoma","type":"exact"},{"name":"malignant peripheral nerve sheath neoplasm with rhabdomyosarcoma","type":"exact"},{"name":"malignant peripheral nerve sheath tumor with rhabdomyosarcoma","type":"exact"},{"name":"malignant peripheral nerve sheath tumor with rhabdomyosarcomatous differenciation","type":"exact"},{"name":"malignant peripheral nerve sheath tumour with rhabdomyosarcoma","type":"exact"},{"name":"malignant peripheral nerve sheath tumour with rhabdomyosarcomatous differenciation","type":"exact"},{"name":"malignant tumor of peripheral nerve sheath with rhabdomyosarcoma","type":"exact"},{"name":"malignant tumor of the peripheral nerve sheath with rhabdomyosarcoma","type":"exact"},{"name":"malignant tumour of peripheral nerve sheath with rhabdomyosarcoma","type":"exact"},{"name":"malignant tumour of the peripheral nerve sheath with rhabdomyosarcoma","type":"exact"}],"termid":"MONDO:0016757","xrefs":{"Monarch":{"xref_id":"0016757"}}}


id: MONDO:0004798
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Sheehan syndrome (obsolete MONDO:0004798)","termid":"MONDO:0004798","xrefs":{"Monarch":{"xref_id":"0004798"}}}


id: PBO:0050565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histamine receptor H1","termid":"PBO:0050565"}


id: PBO:0018237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome assembly protein Sqt1 (predicted)","termid":"PBO:0018237"}


id: PBO:0042920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFTR pseudogene 3","termid":"PBO:0042920"}


id: MONDO:0017164
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hemolytic anemia","termid":"MONDO:0003664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"hemolytic disease of the newborn with Kell alloimmunization","secondary_identifiers":["UMLS:C0472751","GARD:21038","MEDGEN:632769","Orphanet:275944"],"synonyms":[{"name":"anti-K HDN","type":"exact"},{"name":"maternal anti-Kell alloimmunization","type":"exact"}],"termid":"MONDO:0017164","xrefs":{"Monarch":{"xref_id":"0017164"}}}


id: MONDO:0009921
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Holoprosencephaly-postaxial polydactyly syndrome associates, in chromosomally normal neonates, holoprosencephaly, severe facial dysmorphism, postaxial polydactyly and other congenital abnormalities, suggestive of trisomy 13.","definition_xrefs":["Orphanet:2166"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"holoprosencephaly-postaxial polydactyly syndrome","secondary_identifiers":["UMLS:C1849649","MEDGEN:340382","GARD:344","SCTID:716091000","NCIT:C125418","MESH:C535829","OMIM:264480"],"synonyms":[{"name":"PSEUDOTRISOMY 13 syndrome","type":"related"},{"name":"Young-Maders syndrome","type":"related"},{"name":"holoprosencephaly polydactyly syndrome","type":"related"},{"name":"holoprosencephaly-polydactyly syndrome","type":"related"},{"name":"pseudo trisomy 13 syndrome","type":"related"},{"name":"pseudo-trisomy 13 syndrome","type":"exact"}],"termid":"MONDO:0009921","xrefs":{"Monarch":{"xref_id":"0009921"}}}


id: FYPO:0001377
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of calcium ion measured in a cell during a cellular response to salt stress is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular calcium level","termid":"FYPO:0001197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular calcium level during cellular response to salt stress","synonyms":[{"name":"decreased calcium accumulation during cellular response to salt stress","type":"related"},{"name":"decreased cellular calcium ion level during cellular response to salt stress","type":"exact"},{"name":"decreased cellular calcium level during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"decreased cellular calcium level during cellular response to salt stress during vegetative growth","type":"exact"},{"name":"reduced cellular calcium level during cellular response to salt stress","type":"exact"}],"termid":"FYPO:0001377"}


id: GO:0010681
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of cinnamic acid, 3-phenyl-2-propenoic acid, which is then utilized in the metabolism of stilbene.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete cinnamic acid biosynthetic process involved in stilbene metabolism (obsolete GO:0010681)","termid":"GO:0010681"}


id: FYPO:0001653
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the import of lysine into the cell is abnormal in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal amino acid import during vegetative growth","termid":"FYPO:0001361"},{"relation_name":"is_a","term_name":"abnormal lysine import","termid":"FYPO:0001651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal lysine import during vegetative growth","synonyms":[{"name":"abnormal L-lysine import across plasma membrane during vegetative growth","type":"exact"},{"name":"abnormal L-lysine import during vegetative growth","type":"exact"},{"name":"abnormal lysine import during mitotic cell cycle","type":"related"},{"name":"abnormal lysine import into cell during vegetative growth","type":"exact"},{"name":"abnormal lysine uptake during vegetative growth","type":"exact"}],"termid":"FYPO:0001653"}


id: FYPO:0001245
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to cobalt ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0001985","FYPO:0000139","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to cobalt","synonyms":[{"name":"hypersensitive to cobalt","type":"exact"},{"name":"sensitive to cobalt during mitotic cell cycle","type":"related"},{"name":"sensitive to cobalt during vegetative growth","type":"exact"},{"name":"sensitive to cobalt ions","type":"exact"}],"termid":"FYPO:0001245"}


id: GO:0008034
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a conjugated, water-soluble protein in which the nonprotein group consists of a lipid or lipids.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete lipoprotein binding (obsolete GO:0008034)","synonyms":[{"name":"lipoprotein binding","type":"exact"}],"termid":"GO:0008034"}


id: PBO:0035904
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_misfolded_glycoprotein_degradation_during_vegetative_growth","termid":"PBO:0035904"}


id: PBO:0064237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol specific phospholipase C X domain containing 1","termid":"PBO:0064237"}


id: PATO:0002068
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial pattern inhering in a bearer by virtue of the bearer's exhibiting a layered configuration.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stratification","termid":"PATO:0002067"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stratified","termid":"PATO:0002068"}


id: PBO:0045125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dematin actin binding protein","termid":"PBO:0045125"}


id: PBO:0038591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACAD9 divergent transcript","termid":"PBO:0038591"}


id: PBO:0064626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inorganic pyrophosphatase 2","termid":"PBO:0064626"}


id: PBO:0067943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 245","termid":"PBO:0067943"}


id: MONDO:0016473
data:
  {"annotated_genes":["SJAG_05313","SJAG_04213","SJAG_04755","SJAG_01111"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86968,86967],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012252"},{"annotations":[89141,89142],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013224"}]},"cv_name":"mondo","definition":"A neoplastic syndrome most often caused by mutations in the hSNF5/INI1 tumor suppressor gene. It is characterized by the development of an atypical teratoid/rhabdoid tumor in infancy and early childhood. This highly aggressive tumor develops in the central nervous system as an isolated lesion or in combination with extrarenal or renal rhabdoid tumor. Patients may also develop other central nervous system malignancies including medulloblastoma, supratentorial primitive neuroectodermal tumor, and choroid plexus carcinoma.","definition_xrefs":["NCIT:C93268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhabdoid tumor","termid":"MONDO:0002728"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01111":null,"SJAG_04213":null,"SJAG_04755":null,"SJAG_05313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"familial rhabdoid tumor","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:17159","MEDGEN:457750","OMIMPS:609322","Orphanet:231108","UMLS:C2985524"],"synonyms":[{"name":"RTPS","type":"exact"},{"name":"familial posterior fossa brain tumor syndrome of infancy","type":"exact"},{"name":"familial posterior fossa brain tumour syndrome of infancy","type":"exact"},{"name":"familial rhabdoid tumor","type":"exact"},{"name":"hereditary rhabdoid tumor","type":"exact"},{"name":"hereditary rhabdoid tumour","type":"exact"},{"name":"rhabdoid predisposition syndrome","type":"exact"},{"name":"rhabdoid tumor predisposition syndrome","type":"exact"},{"name":"rhabdoid tumour predisposition syndrome","type":"exact"}],"termid":"MONDO:0016473","terms_by_termid":{"MONDO:0012252":null,"MONDO:0013224":null},"xrefs":{"Monarch":{"xref_id":"0016473"}}}


id: PBO:0075728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites","termid":"PBO:0075728"}


id: GO:0043819
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + H2O + precorrin-5 = S-adenosyl-L-homocysteine + acetate + 2 H+ + precorrin-6X.","definition_xrefs":["RHEA:18261","EC:2.1.1.152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016741","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"precorrin-6A synthase (deacetylating) activity","secondary_identifiers":["MetaCyc:R322-RXN","KEGG_REACTION:R05219"],"synonyms":[{"name":"CobF","type":"related"},{"name":"S-adenosyl-L-methionine:precorrin-5 C1-methyltransferase (deacetylating)","type":"exact"},{"name":"precorrin-6X synthase (deacetylating) activity","type":"related"}],"termid":"GO:0043819"}


id: GO:1905209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cardiocyte differentiation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:bc","GOC:BHF_miRNA","PMID:23069713","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of cardiocyte differentiation","termid":"GO:1905207"},{"relation_name":"positively_regulates","term_name":"cardiocyte differentiation","termid":"GO:0035051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiocyte differentiation","synonyms":[{"name":"activation of cardiac cell differentiation","type":"narrow"},{"name":"activation of cardiocyte differentiation","type":"narrow"},{"name":"activation of heart cell differentiation","type":"narrow"},{"name":"positive regulation of cardiac cell differentiation","type":"exact"},{"name":"positive regulation of heart cell differentiation","type":"exact"},{"name":"up regulation of cardiac cell differentiation","type":"exact"},{"name":"up regulation of cardiocyte differentiation","type":"exact"},{"name":"up regulation of heart cell differentiation","type":"exact"},{"name":"up-regulation of cardiac cell differentiation","type":"exact"},{"name":"up-regulation of cardiocyte differentiation","type":"exact"},{"name":"up-regulation of heart cell differentiation","type":"exact"},{"name":"upregulation of cardiac cell differentiation","type":"exact"},{"name":"upregulation of cardiocyte differentiation","type":"exact"},{"name":"upregulation of heart cell differentiation","type":"exact"}],"termid":"GO:1905209"}


id: PBO:0080486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"von Willebrand factor A domain containing 5B1","termid":"PBO:0080486"}


id: PBO:0090347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA mimic/ribosome assembly chaperone for Rps14","termid":"PBO:0090347"}


id: MONDO:0016368
data:
  {"annotated_genes":["SJAG_05329"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88629],"is_not":false,"summary":null,"term":"MONDO:0016368"}]},"cv_name":"mondo","definition":"Rothmund-Thomson syndrome type 1 is a subform of Rothmund-Thomson syndrome (RTS) presenting with a characteristic facial rash (poikiloderma) and frequently associated with short stature, sparse scalp hair, sparse or absent eyelashes and/or eyebrows, and rapidly progressive bilateral juvenile cataracts. In contrast to RTS2, patients with RTS1 do not appear to have an increased risk of developing cancer.","definition_xrefs":["Orphanet:221008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Rothmund-Thomson syndrome","termid":"MONDO:0010002"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05329":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Rothmund-Thomson syndrome type 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1684764","MONDO:0032840","GARD:17134","icd11.foundation:717855330","NCIT:C178826","OMIM:618625","UMLS:C5231433"],"synonyms":[{"name":"Poikiloderma Atrophicans and Cataract","type":"related"},{"name":"ROTHMUND-THOMSON SYNDROME, TYPE 1","type":"related"},{"name":"RTS1","type":"exact"},{"name":"poikiloderma of Rothmund-Thomson type 1","type":"exact"}],"termid":"MONDO:0016368","terms_by_termid":{"MONDO:0016368":null},"xrefs":{"Monarch":{"xref_id":"0016368"}}}


id: MONDO:0009773
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of ectodermal dysplasia characterized by hyperkeratosis and hyperhidrosis of the palms and soles, atrophic malar patches, hypodontia, conical teeth, onychodysplasia, and dry and sparse hair.","definition_xrefs":["Orphanet:2721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"diffuse palmoplantar keratoderma","termid":"MONDO:0017666"},{"relation_name":"is_a","term_name":"ectodermal dysplasia WNT10A related","termid":"MONDO:0100358"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0006025"],"is_obsolete":false,"name":"odonto-onycho-dermal dysplasia","secondary_identifiers":["OMIM:257980","UMLS:C0796093","GARD:4054","icd11.foundation:1256237872","SCTID:403762003","MEDGEN:208666","MESH:C537742"],"synonyms":[{"name":"OODD","type":"exact"},{"name":"ectodermal dysplasia","type":"broad"},{"name":"odontoonychodermal dysplasia","type":"related"}],"termid":"MONDO:0009773","xrefs":{"Monarch":{"xref_id":"0009773"}}}


id: PBO:0065215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosyl pyrophosphate synthetase 1 pseudogene 1","termid":"PBO:0065215"}


id: FYPO:0005933
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during G1 phase of the mitotic cell cycle is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein level during mitotic G1 phase","synonyms":[{"name":"decreased protein accumulation during mitotic G1 phase","type":"related"},{"name":"decreased protein level during G1 phase of mitotic cell cycle","type":"exact"},{"name":"decreased protein level during mitotic G1 phase during vegetative growth","type":"exact"},{"name":"reduced protein level during mitotic G1 phase","type":"exact"}],"termid":"FYPO:0005933"}


id: GO:0047289
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,2-diacyl-3-beta-D-galactosyl-sn-glycerol + CMP-N-acetyl-beta-neuraminate = 1,2-diacyl-3-[3-(alpha-D-N-acetylneuraminyl)-beta-D-galactosyl]-sn-glycerol + CMP + H+.","definition_xrefs":["EC:2.4.3.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sialyltransferase activity","termid":"GO:0008373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"galactosyldiacylglycerol alpha-2,3-sialyltransferase activity","secondary_identifiers":["RHEA:11664","KEGG_REACTION:R03468","MetaCyc:2.4.99.5-RXN"],"termid":"GO:0047289"}


id: GO:0090181
data:
  {"annotated_genes":["SJAG_04018"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77234],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045540"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of cholesterol metabolism, the chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of steroid metabolic process","termid":"GO:0019218"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"cholesterol metabolic process","termid":"GO:0008203"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"regulation of cholesterol metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0090181","terms_by_termid":{"GO:0045540":null}}


id: MONDO:0001572
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well-circumscribed benign smooth muscle neoplasm characterized by the presence of spindle cells with cigar-shaped nuclei, interlacing fascicles, and a whorled pattern.","definition_xrefs":["NCIT:C3157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign smooth muscle neoplasm","termid":"MONDO:0006106"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leiomyoma","secondary_identifiers":["ICD9:215.9","MESH:D007889","SCTID:146801000119103","UMLS:C0023267","DOID:127","ICDO:8890/0","MEDGEN:9710"],"synonyms":[{"name":"fibroid","type":"exact"},{"name":"fibroid neoplasm","type":"exact"},{"name":"fibroid tumor","type":"exact"},{"name":"fibroid tumour","type":"exact"},{"name":"leiomyoma","type":"exact"},{"name":"leiomyoma, benign","type":"exact"},{"name":"leiomyomatous neoplasm","type":"exact"},{"name":"leiomyomatous neoplasm (morphologic abnormality)","type":"exact"},{"name":"leiomyomatous tumor","type":"exact"},{"name":"leiomyomatous tumour","type":"exact"}],"termid":"MONDO:0001572","xrefs":{"Monarch":{"xref_id":"0001572"}}}


id: SO:0002180
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes an enzymatic RNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA_gene","termid":"SO:0001263"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enzymatic_RNA_gene","synonyms":[{"name":"enzymatic RNA gene","type":"exact"}],"termid":"SO:0002180"}


id: PBO:0039785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aquaporin 12A","termid":"PBO:0039785"}


id: FYPO:0005125
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of one or more RNAs that are normally expressed during nitrogen starvation measured in a cell is higher than normal (i.e. higher than observed in wild-type cells) during the meiotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during meiotic cell cycle","termid":"FYPO:0005120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"increased level of nitrogen starvation gene mRNA during meiotic cell cycle","synonyms":[{"name":"increased level of cellular response to nitrogen starvation gene mRNA during meiotic cell cycle","type":"exact"},{"name":"increased level of nitrogen depletion gene mRNA during meiotic cell cycle","type":"exact"},{"name":"increased level of nitrogen deprivation gene mRNA during meiotic cell cycle","type":"exact"},{"name":"increased level of nitrogen starvation gene RNA during meiotic cell cycle","type":"exact"},{"name":"increased level of nitrogen starvation gene transcripts during meiotic cell cycle","type":"exact"},{"name":"increased nitrogen starvation gene mRNA accumulation during meiotic cell cycle","type":"related"}],"termid":"FYPO:0005125"}


id: PBO:0080382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS13A antisense RNA 1","termid":"PBO:0080382"}


id: GO:0047273
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-D-galactosamine + alpha-D-galactosyl-(1->4)-beta-D-galactosyl-(1->4)-beta-D-glucosylceramide = UDP + beta-N-acetyl-D-galactosaminyl-(1->3)-alpha-D-galactosyl-(1->4)-beta-D-galactosyl-(1->4)-beta-D-glucosylceramide.","definition_xrefs":["EC:2.4.1.79"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylgalactosaminyltransferase activity","termid":"GO:0008376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"galactosylgalactosylglucosylceramide beta-D-acetylgalactosaminyltransferase activity","secondary_identifiers":["RHEA:22252","GO:0047226","Reactome:R-HSA-8878914","MetaCyc:2.4.1.79-RXN"],"synonyms":[{"name":"UDP-N-acetyl-D-galactosamine:D-galactosyl-1,4-D-galactosyl-1,4-D-glucosylceramide beta-N-acetyl-D-galactosaminyltransferase activity","type":"related"},{"name":"UDP-N-acetyl-D-galactosamine:alpha-D-galactosyl-(1->4)-beta-D-galactosyl-(1->4)-beta-D-glucosylceramide 3III-beta-N-acetyl-D-galactosaminyltransferase activity","type":"related"},{"name":"UDP-N-acetylgalactosamine:globotriaosylceramide beta-3-N-acetylgalactosaminyltransferase activity","type":"related"},{"name":"UDP-N-acetylgalactosamine:globotriaosylceramide beta1,3-N-acetylgalactosaminyltransferase activity","type":"related"},{"name":"beta-3GalNAc-T1 activity","type":"related"},{"name":"beta3GalNAc-T1","type":"related"},{"name":"galactosylgalactosylglucosylceramide beta-D- activity","type":"related"},{"name":"globoside synthase activity","type":"related"},{"name":"globoside synthetase activity","type":"related"},{"name":"globotriaosylceramide 3-beta-N-acetylgalactosaminyltransferase activity","type":"related"},{"name":"globotriosylceramide beta-1,6-N-acetylgalactosaminyltransferase activity","type":"exact"},{"name":"uridine diphosphoacetylgalactosamine-galactosylgalactosylglucosylceramide acetylgalactosaminyltransferase activity","type":"related"}],"termid":"GO:0047273"}


id: MONDO:0017595
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"B-cell non-Hodgkin lymphoma","termid":"MONDO:0015759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"aggressive B-cell non-Hodgkin lymphoma","secondary_identifiers":["UMLS:C5555120","MEDGEN:1791561","NCIT:C178541","Orphanet:300846","GARD:21245"],"synonyms":[{"name":"aggressive B-cell NHL","type":"exact"}],"termid":"MONDO:0017595","xrefs":{"Monarch":{"xref_id":"0017595"}}}


id: PBO:0038527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase domain containing 1","termid":"PBO:0038527"}


id: FYPO:0002049
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is elongated, has no septum, and contains more than one nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated multinucleate vegetative cell","termid":"FYPO:0000133"},{"relation_name":"is_a","term_name":"elongated aseptate vegetative cell","termid":"FYPO:0000950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000032"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0000032","FYPO:0000005"],"is_obsolete":false,"name":"elongated multinucleate aseptate vegetative cell","synonyms":[{"name":"elongated multinucleate aseptate cells during vegetative growth","type":"exact"},{"name":"elongated multinucleate aseptate vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002049"}


id: PBO:0044609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDB1 and CUL4 associated factor 13","termid":"PBO:0044609"}


id: PBO:0030107
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_citrulline_level","termid":"PBO:0030107"}


id: MONDO:0019518
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Waardenburg-Shah syndrome (WSS) is a neurocristopathy characterized by the association of Waardenburg syndrome (sensorineural hearing loss and pigmentary abnormalities) and Hirschsprung disease.","definition_xrefs":["Orphanet:897"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"excluded_subClassOf","term_name":"hypopigmentation of the skin","termid":"MONDO:0019290"},{"relation_name":"is_a","term_name":"Waardenburg syndrome","termid":"MONDO:0018094"},{"relation_name":"is_a","term_name":"intestinal motility disease","termid":"MONDO:0021189"},{"relation_name":"is_a","term_name":"neurocristopathy","termid":"MONDO:0021635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0000426"],"is_obsolete":false,"name":"Waardenburg-Shah syndrome","secondary_identifiers":["GARD:5524","icd11.foundation:1420151003","NCIT:C124842"],"synonyms":[{"name":"Hirschsprung disease with pigmentary anomaly","type":"related"},{"name":"Shah-Waardenburg syndrome","type":"exact"},{"name":"WS4","type":"exact"},{"name":"Waardenburg syndrome type 4","type":"exact"},{"name":"Waardenburg syndrome type IV","type":"exact"},{"name":"Waardenburg-Hirschsprung disease","type":"related"},{"name":"Waardenburg-Hirschsprung syndrome","type":"exact"},{"name":"Waardenburg-Shah syndrome","type":"exact"}],"termid":"MONDO:0019518","xrefs":{"Monarch":{"xref_id":"0019518"}}}


id: PATO:0000086
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000086 absolute sensitivity (obsolete PATO:0000086)","termid":"PATO:0000086"}


id: GO:0043642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of novobiocin, a coumarin antibiotic produced by the bacterium Gyrasestreptomyces spheroides, that acts by inhibiting DNA gyrase.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coumarin biosynthetic process","termid":"GO:0009805"},{"relation_name":"is_a","term_name":"glycoside biosynthetic process","termid":"GO:0016138"},{"relation_name":"is_a","term_name":"antibiotic biosynthetic process","termid":"GO:0017000"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"novobiocin metabolic process","termid":"GO:0043641"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"novobiocin biosynthetic process","secondary_identifiers":["Wikipedia:Novobiocin"],"termid":"GO:0043642"}


id: PBO:0062925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"purinergic receptor P2Y12","termid":"PBO:0062925"}


id: GO:0072288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a metanephric proximal tubule are generated and organized. The metanephric proximal tubule is a metanephric nephron tubule that connects Bowman's capsule to the descending thin limb of the loop of Henle in the metanephros. It has a brush border epithelial morphology.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proximal tubule morphogenesis","termid":"GO:0072158"},{"relation_name":"is_a","term_name":"metanephric nephron tubule morphogenesis","termid":"GO:0072282"},{"relation_name":"part_of","term_name":"metanephric proximal tubule development","termid":"GO:0072237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric proximal tubule morphogenesis","termid":"GO:0072288"}


id: PBO:0038898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADGRA3 pseudogene 1","termid":"PBO:0038898"}


id: PR:O94687
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tas3 gene.","definition_xrefs":["UniProtKB:O94687","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-induced transcriptional silencing complex protein tas3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC83.03c","synonyms":[{"name":"RITS protein tas3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-tas3","type":"exact"}],"termid":"PR:O94687"}


id: MONDO:0007266
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypertrophic cardiomyopathy in which the cause of the disease is a mutation in the TNNT2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hypertrophic cardiomyopathy","termid":"MONDO:0024573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"hypertrophic cardiomyopathy 2","secondary_identifiers":["NCIT:C142892","MESH:C566171","DOID:0110308","OMIM:115195","MEDGEN:349383","UMLS:C1861864"],"synonyms":[{"name":"CMH2","type":"exact"},{"name":"TNNT2 hypertrophic cardiomyopathy","type":"exact"},{"name":"cardiomyopathy familial hypertrophic 2","type":"exact"},{"name":"cardiomyopathy, familial hypertrophic, 2","type":"related"},{"name":"cardiomyopathy, familial hypertrophic, type 2","type":"exact"},{"name":"cardiomyopathy, hypertrophic, 2","type":"exact"},{"name":"familial hypertrophic cardiomyopathy type 2","type":"exact"},{"name":"hypertrophic cardiomyopathy 2","type":"exact"},{"name":"hypertrophic cardiomyopathy caused by mutation in TNNT2","type":"exact"},{"name":"hypertrophic cardiomyopathy type 2","type":"exact"}],"termid":"MONDO:0007266","xrefs":{"Monarch":{"xref_id":"0007266"}}}


id: PBO:0077883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin polymerization promoting protein family member 3","termid":"PBO:0077883"}


id: FYPO:0001960
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of DNA topoisomerase II activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000652","FYPO:0000707","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"abnormal DNA topoisomerase II activity","synonyms":[{"name":"abnormal DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity","type":"exact"}],"termid":"FYPO:0001960"}


id: MONDO:0021664
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cervical aortic arch (obsolete MONDO:0021664)","termid":"MONDO:0021664","xrefs":{"Monarch":{"xref_id":"0021664"}}}


id: GO:0003103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of diuresis. Diuresis is the process of renal water excretion.","definition_xrefs":["GOC:mtg_cardio"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of diuresis (obsolete GO:0003103)","synonyms":[{"name":"positive regulation of diuresis","type":"exact"}],"termid":"GO:0003103"}


id: PBO:0080699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wnt family member 5A","termid":"PBO:0080699"}


id: GO:1905811
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of excitatory synapse pruning.","definition_xrefs":["GO_REF:0000058","PMID:27779093","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of synapse pruning","termid":"GO:1905807"},{"relation_name":"is_a","term_name":"regulation of excitatory synapse pruning","termid":"GO:1905810"},{"relation_name":"negatively_regulates","term_name":"excitatory synapse pruning","termid":"GO:1905805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of excitatory synapse pruning","synonyms":[{"name":"down regulation of excitatory synapse disassembly","type":"exact"},{"name":"down-regulation of excitatory synapse disassembly","type":"exact"},{"name":"downregulation of excitatory synapse disassembly","type":"exact"},{"name":"inhibition of excitatory synapse disassembly","type":"narrow"},{"name":"regulation of synapse clearance","type":"broad"},{"name":"regulation of synapse disassembly","type":"broad"},{"name":"regulation of synapse elimination","type":"broad"},{"name":"regulation of synapse removal","type":"broad"}],"termid":"GO:1905811"}


id: PBO:0109546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIP/FAR complex WD repeat (scaffold) subunit, striatin Csc3","termid":"PBO:0109546"}


id: GO:0031875
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 4 proteinase activated receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteinase activated receptor binding","termid":"GO:0031871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"type 4 proteinase activated receptor binding","synonyms":[{"name":"type 4 proteinase activated receptor ligand","type":"narrow"}],"termid":"GO:0031875"}


id: PBO:0084687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial component of the ERMES complex; links the ER to mitochondria and may promote inter-organellar calcium and phospholipid exchange as well as coordinating mitochondrial DNA replication and growth; required for mitophagy; ERMES complex is often co-localized with peroxisomes and with concentrated areas of pyruvate dehydrogenase","termid":"PBO:0084687"}


id: GO:0005070
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Interacting selectively and non-covalently and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68).","definition_xrefs":["GOC:so","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete SH3/SH2 adaptor activity (obsolete GO:0005070)","synonyms":[{"name":"SH3/SH2 adaptor protein activity","type":"narrow"}],"termid":"GO:0005070"}


id: PBO:0063654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase 1 pseudogene 11","termid":"PBO:0063654"}


id: PBO:0056575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAPK regulated corepressor interacting protein 2 pseudogene 2","termid":"PBO:0056575"}


id: GO:0071274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of isoquinoline alkaloids, alkaloid compounds that contain bicyclic N-containing aromatic rings and are derived from a 3,4-dihydroxytyramine (dopamine) precursor that undergoes a Schiff base addition with aldehydes of different origin.","definition_xrefs":["GOC:mah","PMID:23666088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkaloid catabolic process","termid":"GO:0009822"},{"relation_name":"is_a","term_name":"isoquinoline alkaloid metabolic process","termid":"GO:0033076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"isoquinoline alkaloid catabolic process","synonyms":[{"name":"ipecac alkaloid catabolism","type":"related"},{"name":"isoquinoline alkaloid breakdown","type":"exact"},{"name":"isoquinoline alkaloid catabolism","type":"exact"},{"name":"isoquinoline alkaloid degradation","type":"exact"}],"termid":"GO:0071274"}


id: PBO:0061314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NPHS1 adhesion molecule, nephrin","termid":"PBO:0061314"}


id: FYPO:0005612
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the nuclear envelope is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to nucleus","termid":"FYPO:0006553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to nuclear envelope","synonyms":[{"name":"normal protein localisation to nuclear envelope","type":"exact"}],"termid":"FYPO:0005612"}


id: SO:0000937
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000937 vertebrate_immune_system_feature (obsolete SO:0000937)","termid":"SO:0000937"}


id: PBO:0085814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; expressed at both mRNA and protein levels","termid":"PBO:0085814"}


id: MOD:00912
data:
  {"annotated_genes":["SJAG_03861","SJAG_04149","SJAG_02205","SJAG_01766","SJAG_02766","SJAG_03641","SJAG_02972","SJAG_05230","SJAG_00464","SJAG_00937","SJAG_03914","SJAG_00043","SJAG_02450","SJAG_03671","SJAG_00432"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[82528],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00126"},{"annotations":[82527,82437],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00123"},{"annotations":[82480],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00127"},{"annotations":[82301,82428,82465,82466,82370,82404,82362,82392,82416,82516,82215,82394],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00128"}]},"cv_name":"PSI-MOD","definition":"A protein modification that modifies an L-lysine residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00043":null,"SJAG_00432":null,"SJAG_00464":null,"SJAG_00937":null,"SJAG_01766":null,"SJAG_02205":null,"SJAG_02450":null,"SJAG_02766":null,"SJAG_02972":null,"SJAG_03641":null,"SJAG_03671":null,"SJAG_03861":null,"SJAG_03914":null,"SJAG_04149":null,"SJAG_05230":null},"genotype_count":0,"is_obsolete":false,"name":"modified L-lysine residue","references_by_uniquename":{"PMID:36408920":null},"synonyms":[{"name":"ModLys","type":"exact"}],"termid":"MOD:00912","terms_by_termid":{"MOD:00123":null,"MOD:00126":null,"MOD:00127":null,"MOD:00128":null}}


id: MONDO:0007538
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any amelogenesis imperfecta in which the cause of the disease is a mutation in the FAM83H gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypocalcified amelogenesis imperfecta","termid":"MONDO:0968955"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amelogenesis imperfecta, type 3A","secondary_identifiers":["DOID:0110055","OMIM:130900","MESH:C562880","SCTID:109471001","MEDGEN:1854533","UMLS:C5886770"],"synonyms":[{"name":"ADHCAI","type":"exact"},{"name":"AI3","type":"exact"},{"name":"AI3A","type":"related"},{"name":"FAM83H amelogenesis imperfecta","type":"exact"},{"name":"amelogenesis imperfecta caused by mutation in FAM83H","type":"exact"},{"name":"amelogenesis imperfecta hypomineralization type","type":"broad"},{"name":"amelogenesis imperfecta type 3","type":"broad"},{"name":"amelogenesis imperfecta type 3A","type":"related"},{"name":"amelogenesis imperfecta type III","type":"broad"},{"name":"amelogenesis imperfecta, hypocalcification type, autosomal dominant","type":"related"},{"name":"amelogenesis imperfecta, hypomineralization type","type":"related"},{"name":"amelogenesis imperfecta, type 3","type":"related"},{"name":"amelogenesis imperfecta, type 3A","type":"exact"},{"name":"amelogenesis imperfecta, type III","type":"related"},{"name":"amelogenesis imperfecta, type IIIA","type":"related"},{"name":"autosomal dominant amelogenesis imperfecta hypocalcification type","type":"exact"}],"termid":"MONDO:0007538","xrefs":{"Monarch":{"xref_id":"0007538"}}}


id: MONDO:0011234
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any auriculocondylar syndrome in which the cause of the disease is a mutation in the GNAI3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auriculocondylar syndrome","termid":"MONDO:0000107"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"auriculocondylar syndrome 1","secondary_identifiers":["OMIM:602483","MEDGEN:1639644","UMLS:C4551996","GARD:15346"],"synonyms":[{"name":"ARCND1","type":"related"},{"name":"AURICULOCONDYLAR syndrome 1","type":"related"},{"name":"Auriculocondylar syndrome 1","type":"exact"},{"name":"Auriculocondylar syndrome type 1","type":"exact"},{"name":"GNAI3 auriculocondylar syndrome","type":"exact"},{"name":"auriculocondylar syndrome caused by mutation in GNAI3","type":"exact"},{"name":"question Mark ears syndrome","type":"related"}],"termid":"MONDO:0011234","xrefs":{"Monarch":{"xref_id":"0011234"}}}


id: GO:0050242
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + phosphate + pyruvate = AMP + diphosphate + 2 H+ + phosphoenolpyruvate.","definition_xrefs":["RHEA:10756"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, paired acceptors","termid":"GO:0016781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"pyruvate, phosphate dikinase activity","secondary_identifiers":["EC:2.7.9.1","MetaCyc:PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN","KEGG_REACTION:R00206"],"synonyms":[{"name":"ATP:pyruvate, phosphate phosphotransferase activity","type":"related"},{"name":"PPDK","type":"related"},{"name":"orthophosphate dikinase pyruvate","type":"related"},{"name":"pyruvate, Pi dikinase activity","type":"related"},{"name":"pyruvate,orthophosphate dikinase activity","type":"related"},{"name":"pyruvate,phosphate dikinase activity","type":"related"},{"name":"pyruvate-inorganic phosphate dikinase activity","type":"related"},{"name":"pyruvate-phosphate dikinase (phosphorylating)","type":"related"},{"name":"pyruvate-phosphate dikinase activity","type":"related"},{"name":"pyruvate-phosphate ligase activity","type":"related"},{"name":"pyruvic-phosphate dikinase activity","type":"related"},{"name":"pyruvic-phosphate ligase activity","type":"related"}],"termid":"GO:0050242"}


id: MONDO:0002898
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the zone of skin","direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system cancer","termid":"MONDO:0000653"},{"relation_name":"is_a","term_name":"skin neoplasm","termid":"MONDO:0002531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"skin cancer","secondary_identifiers":["SCTID:372130007","DOID:4159","MEDGEN:40101","UMLS:C0007114","ICD9:173.8","NCIT:C2920","ICD10CM:C43-C44","ICD9:173.9"],"synonyms":[{"name":"CA - skin cancer","type":"exact"},{"name":"cancer of skin","type":"related"},{"name":"cancer of zone of skin","type":"exact"},{"name":"malignant neoplasm of skin","type":"exact"},{"name":"malignant neoplasm of the skin","type":"exact"},{"name":"malignant neoplasm of zone of skin","type":"exact"},{"name":"malignant skin neoplasm","type":"exact"},{"name":"malignant skin tumor","type":"exact"},{"name":"malignant skin tumour","type":"exact"},{"name":"malignant tumor of skin","type":"exact"},{"name":"malignant tumor of the skin","type":"exact"},{"name":"malignant tumour of skin","type":"exact"},{"name":"malignant tumour of the skin","type":"exact"},{"name":"malignant zone of skin neoplasm","type":"exact"},{"name":"melanoma and non-melanoma skin cancer","type":"exact"},{"name":"skin cancer","type":"exact"},{"name":"skin cancer, Including melanoma","type":"exact"},{"name":"skin neoplasm, malignant","type":"exact"},{"name":"zone of skin cancer","type":"exact"}],"termid":"MONDO:0002898","xrefs":{"Monarch":{"xref_id":"0002898"}}}


id: MONDO:0017769
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"acquired immunodeficiency","secondary_identifiers":["GARD:21359","Orphanet:310050","icd11.foundation:609223181","MEDGEN:1843453","UMLS:C0596032"],"termid":"MONDO:0017769","xrefs":{"Monarch":{"xref_id":"0017769"}}}


id: MONDO:0011369
data:
  {"annotated_genes":["SJAG_04785","SJAG_01072","SJAG_02432"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88295,88296,88297],"is_not":false,"summary":null,"term":"MONDO:0011369"}]},"cv_name":"mondo","definition":"Any familial hypercholesterolemia in which the cause of the disease is a mutation in the PCSK9 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hypercholesterolemia","termid":"MONDO:0005439"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01072":null,"SJAG_02432":null,"SJAG_04785":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"hypercholesterolemia, autosomal dominant, 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C566337","OMIM:603776","UMLS:C1863551","MEDGEN:355007"],"synonyms":[{"name":"Fh3","type":"related"},{"name":"HCHOLA3","type":"related"},{"name":"PCSK9 familial hypercholesterolemia","type":"exact"},{"name":"familial hypercholesterolemia caused by mutation in PCSK9","type":"exact"},{"name":"hypercholesterolemia, autosomal dominant, 3","type":"exact"},{"name":"hypercholesterolemia, autosomal dominant, type 3","type":"exact"},{"name":"hypercholesterolemia, familial, 3","type":"exact"},{"name":"low density lipoprotein cholesterol level QTL 1","type":"exact"},{"name":"low density lipoprotein cholesterol level quantitative trait locus 1","type":"related"}],"termid":"MONDO:0011369","terms_by_termid":{"MONDO:0011369":null},"xrefs":{"Monarch":{"xref_id":"0011369"}}}


id: GO:1905549
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of subtelomeric heterochromatin assembly.","definition_xrefs":["GOC:BHF_telomere","GOC:TermGenie","GO_REF:0000058","GOC:BHF","GOC:nc","PMID:25819580"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of subtelomeric heterochromatin assembly (obsolete GO:1905549)","synonyms":[{"name":"activation of telomeric heterochromatin assembly","type":"narrow"},{"name":"activation of telomeric heterochromatin formation","type":"narrow"},{"name":"positive regulation of telomeric heterochromatin assembly","type":"related"},{"name":"positive regulation of telomeric heterochromatin formation","type":"related"},{"name":"up regulation of telomeric heterochromatin assembly","type":"related"},{"name":"up regulation of telomeric heterochromatin formation","type":"related"},{"name":"up-regulation of telomeric heterochromatin assembly","type":"related"},{"name":"up-regulation of telomeric heterochromatin formation","type":"related"},{"name":"upregulation of telomeric heterochromatin assembly","type":"related"},{"name":"upregulation of telomeric heterochromatin formation","type":"related"}],"termid":"GO:1905549"}


id: MONDO:0020720
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary hypophosphatemic rickets","termid":"MONDO:0000044"},{"relation_name":"is_a","term_name":"X-linked disease","termid":"MONDO:0000425"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked hypophosphatemic rickets","secondary_identifiers":["icd11.foundation:1169135980","UMLS:C3540852","MEDGEN:761927","NCIT:C123265","MESH:D053098"],"synonyms":[{"name":"X-linked hypophosphatemic rickets","type":"exact"},{"name":"X-linked hypophosphatemic rickets (recessive or dominant)","type":"exact"}],"termid":"MONDO:0020720","xrefs":{"Monarch":{"xref_id":"0020720"}}}


id: GO:0052922
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 isopentenyl diphosphate + (2E,6E,10E)-geranylgeranyl diphosphate = all-trans-hexaprenyl diphosphate + 2 diphosphate.","definition_xrefs":["RHEA:27555"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyl diphosphate synthase activity","termid":"GO:0120531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016765","GO:0003824"],"is_obsolete":false,"name":"hexaprenyl diphosphate synthase (geranylgeranyl-diphosphate specific) activity","secondary_identifiers":["KEGG_REACTION:R09246","MetaCyc:RXN-11485","EC:2.5.1.82"],"synonyms":[{"name":"(all-E) hexaprenyl diphosphate synthase activity","type":"broad"},{"name":"(all-trans)-hexaprenyl-diphosphate synthase activity","type":"broad"},{"name":"hexaprenyl diphosphate synthase activity","type":"broad"},{"name":"hexaprenyl pyrophosphate synthetase activity","type":"broad"}],"termid":"GO:0052922"}


id: PBO:0000579
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"no apparent S. cerevisiae ortholog (cannot be distinguished)","termid":"PBO:0000579"}


id: PBO:0001904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP complex subunit Bet5 (predicted)","termid":"PBO:0001904"}


id: GO:0016788
data:
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