# terms

id: PBO:0116313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-FO ATP synthase F(o) subunit G, Atp20","termid":"PBO:0116313"}


id: PBO:0058139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4436b-1","termid":"PBO:0058139"}


id: PBO:0055480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2913","termid":"PBO:0055480"}


id: FYPO:0001176
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing sucrose as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0005447","FYPO:0002058","FYPO:0001985","FYPO:0000003","FYPO:0002057","FYPO:0000139"],"is_obsolete":false,"name":"decreased cell population growth on sucrose carbon source","synonyms":[{"name":"decreased growth on sucrose carbon source","type":"broad"},{"name":"decreased vegetative cell growth on sucrose carbon source","type":"exact"},{"name":"reduced cell growth on sucrose carbon source","type":"related"},{"name":"slow cell growth on sucrose carbon source","type":"narrow"}],"termid":"FYPO:0001176"}


id: MONDO:0010002
data:
  {"annotated_genes":["SJAG_05329","SJAG_02200","SJAG_04183","SJAG_04995"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88629],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0016368"},{"annotations":[86831,86832],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0016369"},{"annotations":[88754],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0970950"}]},"cv_name":"mondo","definition":"Rothmund-Thomson syndrome (RTS) is a genodermatosis presenting with a characteristic facial rash (poikiloderma) associated with short stature due to pre- and postnatal growth delay, sparse scalp hair, sparse or absent eyelashes and/or eyebrows, juvenile cataracts, skeletal abnormalities, radial ray defects, premature aging and a predisposition to certain cancers.","definition_xrefs":["Orphanet:2909"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"excluded_subClassOf","term_name":"progeroid syndrome","termid":"MONDO:0015333"},{"relation_name":"excluded_subClassOf","term_name":"hereditary poikiloderma","termid":"MONDO:0016382"},{"relation_name":"excluded_subClassOf","term_name":"telomere syndrome","termid":"MONDO:0100137"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"},{"relation_name":"is_a","term_name":"hereditary photodermatosis","termid":"MONDO:0015951"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02200":null,"SJAG_04183":null,"SJAG_04995":null,"SJAG_05329":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Rothmund-Thomson syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:1200671","DOID:2732","NCIT:C3335","GARD:4392","UMLS:C0032339","icd11.foundation:652761118","SCTID:69093006","MESH:D011038","ICD9:759.89","OMIMPS:268400","MEDGEN:10819","NORD:1678"],"synonyms":[{"name":"RTS","type":"exact"},{"name":"Rothmund-Thomson syndrome","type":"exact"},{"name":"congenital poikiloderma","type":"exact"},{"name":"poikiloderma atrophicans and cataract","type":"related"},{"name":"poikiloderma congenitale","type":"related"},{"name":"poikiloderma of Rothmund-Thomson","type":"exact"}],"termid":"MONDO:0010002","terms_by_termid":{"MONDO:0016368":null,"MONDO:0016369":null,"MONDO:0970950":null},"xrefs":{"Monarch":{"xref_id":"0010002"}}}


id: PBO:0049185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grainyhead like transcription factor 2","termid":"PBO:0049185"}


id: GO:0060485
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a mesenchymal tissue over time, from its formation to the mature structure. A mesenchymal tissue is made up of loosely packed stellate cells.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue development","termid":"GO:0009888"},{"relation_name":"part_of","term_name":"animal organ development","termid":"GO:0048513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchyme development","synonyms":[{"name":"mesenchymal development","type":"exact"}],"termid":"GO:0060485"}


id: FYPO:0004109
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which the activation of monopolar cell growth, i.e. the initiation of growth at the old end of a cell following cell division, begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal activation of monopolar cell growth","termid":"FYPO:0001393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"delayed activation of monopolar cell growth","synonyms":[{"name":"delayed activation of monopolar vegetative cell growth","type":"exact"},{"name":"delayed onset of activation of monopolar vegetative cell growth","type":"exact"}],"termid":"FYPO:0004109"}


id: FYPO:0000005
data:
  {"alleles_by_uniquename":{"SJAG_00028:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00028","name":"rga6delta","uniquename":"SJAG_00028:allele-1"},"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_00370:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00370","name":"erg1delta","uniquename":"SJAG_00370:allele-1"},"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_01794:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01794","name":"scd2delta","uniquename":"SJAG_01794:allele-1"},"SJAG_02013:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02013","name":"pyp1delta","uniquename":"SJAG_02013:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_02819:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02819","name":"efc25delta","uniquename":"SJAG_02819:allele-1"},"SJAG_03048:allele-1":{"allele_type":"amino_acid_mutation","description":"G146D","gene_uniquename":"SJAG_03048","name":"cdc2-1w","uniquename":"SJAG_03048:allele-1"},"SJAG_03453:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03453","name":"ras1delta","uniquename":"SJAG_03453:allele-1"},"SJAG_03581:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03581","name":"gef1delta","uniquename":"SJAG_03581:allele-1"},"SJAG_04280:allele-1":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-1"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"G788E","gene_uniquename":"SJAG_04280","name":"wee1-G788E","uniquename":"SJAG_04280:allele-2"},"SJAG_04312:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04312","name":"pka1delta","uniquename":"SJAG_04312:allele-1"},"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"},"SJAG_04703:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04703","name":"for3delta","uniquename":"SJAG_04703:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121014],"is_not":false,"summary":null,"term":"FYPO:0000005"},{"annotations":[121382,121176,121394],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0001122"},{"annotations":[121324],"is_not":false,"rel_names":["has_part","is_a"],"summary":null,"term":"FYPO:0007701"},{"annotations":[121064],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001956"},{"annotations":[121020,121023,121019,121403],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0000648"},{"annotations":[121507,121470,121475,121481],"is_not":false,"rel_names":["has_part","is_a"],"summary":null,"term":"FYPO:0002380"},{"annotations":[121028,121021,121022],"is_not":false,"rel_names":["has_part","is_a"],"summary":null,"term":"FYPO:0001877"},{"annotations":[121026,121027],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0006616"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype characterized by altered cell morphology, i.e. the size, shape, or structure of the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell phenotype","termid":"FYPO:0003037"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality 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type"}]}]},"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]},"efc25delta":{"display_name":"efc25delta","display_uniquename":"efc25delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02819:allele-1","expression":"Null"}]}]},"erg1delta":{"display_name":"erg1delta","display_uniquename":"erg1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00370:allele-1","expression":"Null"}]}]},"for3delta":{"display_name":"for3delta","display_uniquename":"for3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04703:allele-1","expression":"Null"}]}]},"gef1delta":{"display_name":"gef1delta","display_uniquename":"gef1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03581:allele-1","expression":"Null"}]}]},"pka1delta":{"display_name":"pka1delta","display_uniquename":"pka1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04312:allele-1","expression":"Null"}]}]},"pyp1delta":{"display_name":"pyp1delta","display_uniquename":"pyp1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02013:allele-1","expression":"Null"}]}]},"ras1delta":{"display_name":"ras1delta","display_uniquename":"ras1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03453:allele-1","expression":"Null"}]}]},"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rga6delta":{"display_name":"rga6delta","display_uniquename":"rga6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00028:allele-1","expression":"Null"}]}]},"scd1delta":{"display_name":"scd1delta","display_uniquename":"scd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00514:allele-1","expression":"Null"}]}]},"scd2delta":{"display_name":"scd2delta","display_uniquename":"scd2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01794:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]},"wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-G788E(aa)","display_uniquename":"wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]}},"in_subsets":["fypo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal cell morphology","references_by_uniquename":{"PMID:25866389":null,"PMID:27678009":null,"PMID:29566183":null,"PMID:30664646":null,"PMID:30726171":null,"PMID:31150379":null,"PMID:40195311":null},"secondary_identifiers":["FYPO:0000019"],"single_locus_annotated_genes":["SJAG_00514","SJAG_00266","SJAG_03048","SJAG_04280","SJAG_01794","SJAG_02592","SJAG_04312","SJAG_02013","SJAG_00370","SJAG_03453","SJAG_00028","SJAG_03581","SJAG_04522","SJAG_02819","SJAG_04703","SJAG_04332"],"single_locus_genotype_uniquenames":["for3delta","pyp1delta","ras1delta","wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type","scd2delta","atf1delta","scd1delta","wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type","erg1delta","pka1delta","gef1delta","cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","rga4delta","sty1delta","efc25delta","rga6delta"],"synonyms":[{"name":"cell morphology, misshapen cells","type":"related"},{"name":"cellular morphology: abnormal","type":"related"}],"termid":"FYPO:0000005","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000102":null,"FYECO:0000137":null,"FYECO:0000338":null,"FYPO:0000005":null,"FYPO:0000648":null,"FYPO:0001122":null,"FYPO:0001877":null,"FYPO:0001956":null,"FYPO:0002380":null,"FYPO:0006616":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: PBO:0051489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin superfamily member 6","termid":"PBO:0051489"}


id: FYPO:0005710
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which negative regulation of the initiation of DNA-dependent DNA replication is abnormal, resulting in one or more rounds of rereplication of the entire genome, followed by cell cycle arrest.","definition_xrefs":["PomBase:mah","PMID:7774573"],"direct_ancestors":[{"relation_name":"has_part","term_name":"abnormal mitotic cell cycle arrest with replicated DNA","termid":"FYPO:0000444"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle arrest with replicated DNA","termid":"FYPO:0000444"},{"relation_name":"is_a","term_name":"abnormal negative regulation of mitotic DNA replication initiation resulting in complete rereplication","termid":"FYPO:0001425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"abnormal negative regulation of DNA replication initiation resulting in complete rereplication, with mitotic cell cycle arrest","synonyms":[{"name":"abnormal negative regulation of DNA replication initiation resulting in complete re-replication, with mitotic cell cycle arrest","type":"exact"},{"name":"abnormal negative regulation of DNA replication initiation resulting in complete rereplication, with cell cycle arrest, during mitotic cell cycle","type":"related"},{"name":"abnormal negative regulation of DNA replication initiation resulting in complete rereplication, with mitotic cell cycle arrest with replicated DNA","type":"exact"},{"name":"abnormal negative regulation of DNA replication initiation resulting in complete rereplication, with mitotic cell cycle arrest, during vegetative growth","type":"exact"},{"name":"abnormal negative regulation of DNA-dependent DNA replication initiation resulting in complete rereplication, with mitotic cell cycle arrest","type":"exact"}],"termid":"FYPO:0005710"}


id: PBO:0062291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily M member 2 pseudogene","termid":"PBO:0062291"}


id: SO:0000794
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A rescue region that is engineered.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"engineered","termid":"SO:0000783"},{"relation_name":"is_a","term_name":"rescue_region","termid":"SO:0000411"},{"relation_name":"is_a","term_name":"engineered_region","termid":"SO:0000804"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"engineered_rescue_region","synonyms":[{"name":"engineered rescue fragment","type":"exact"},{"name":"engineered rescue region","type":"exact"},{"name":"engineered rescue segment","type":"exact"}],"termid":"SO:0000794"}


id: GO:0120310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphological, biochemical and genetic changes that induce the differentiation of metacyclic parasites into amastigotes in some of the Trypanosomatidae species such as Leishmania parasites and Trypanosoma cruzi. This process occurs inside the cells of the mammalian hosts, particularly in macrophages and other phagocytic cells for Leishmania parasites.","definition_xrefs":["PMID:12377273","GOC:krc","PMID:13129524","GOC:ach","PMID:26752404","DOI:10.5772/intechopen.84639"],"direct_ancestors":[{"relation_name":"is_a","term_name":"development of symbiont in host","termid":"GO:0044114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amastigogenesis","termid":"GO:0120310"}


id: GO:0005597
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen trimer containing alpha(XVI) chains; type XVI trimers can associate with microfibrils.","definition_xrefs":["GOC:mah","PMID:12782140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FACIT collagen trimer","termid":"GO:0005593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"collagen type XVI trimer","termid":"GO:0005597"}


id: PBO:0028981
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_microtubule_during_vegetative_growth","termid":"PBO:0028981"}


id: GO:0015982
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of coupled solute translocation in which two solutes equilibrate across an osmotic barrier, the translocation of solute being coupled to the translocation of the other in the opposite direction.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete antiport (obsolete GO:0015982)","synonyms":[{"name":"antiport","type":"exact"}],"termid":"GO:0015982"}


id: GO:0046905
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 geranylgeranyl diphosphate = 15-cis-phytoene + 2 diphosphate.","definition_xrefs":["RHEA:34475","PMID:12641468"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyltransferase activity","termid":"GO:0004659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016765","GO:0003674"],"is_obsolete":false,"name":"15-cis-phytoene synthase activity","secondary_identifiers":["MetaCyc:RXN-13323","EC:2.5.1.32"],"synonyms":[{"name":"PSase activity","type":"exact"},{"name":"geranylgeranyl-diphosphate geranylgeranyltransferase activity","type":"exact"},{"name":"geranylgeranyl-diphosphate:geranylgeranyl-diphosphate geranylgeranyltransferase (15-cis-phytoene-forming) activity","type":"exact"},{"name":"phytoene synthase activity","type":"exact"},{"name":"prephytoene-diphosphate synthase activity","type":"exact"}],"termid":"GO:0046905"}


id: GO:0006403
data:
  {"annotated_genes":["SJAG_04379","SJAG_01449","SJAG_04480","SJAG_00375","SJAG_04083","SJAG_02274","SJAG_04310","SJAG_03299","SJAG_00093","SJAG_04589","SJAG_01715","SJAG_03729","SJAG_01652","SJAG_03693","SJAG_00471","SJAG_03593","SJAG_02757","SJAG_03847","SJAG_04536","SJAG_04622","SJAG_03358","SJAG_02661","SJAG_04360","SJAG_02209","SJAG_04202","SJAG_01013","SJAG_02425","SJAG_00298","SJAG_04148","SJAG_04656","SJAG_02520","SJAG_05328","SJAG_03986","SJAG_00992","SJAG_02534","SJAG_04472","SJAG_03002","SJAG_03156","SJAG_00178","SJAG_02704","SJAG_01374","SJAG_01584","SJAG_04115","SJAG_00641","SJAG_03300","SJAG_01185","SJAG_01529","SJAG_01467","SJAG_01065","SJAG_04721","SJAG_03470","SJAG_04017","SJAG_01083","SJAG_04347","SJAG_04645","SJAG_03283"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74538,119129,61701,79250,74454,63276,78422,91301,81939,102971,75816],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006406"},{"annotations":[74922],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031990"},{"annotations":[65570,58699,60138],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051028"},{"annotations":[113604,76447,117915,76201,74768,74921,79066,112976,76107,120808,112277,116320,103684,75492,94007,71631,98761,82163,73128,104473,77421,105764,109470,98349,118173,117663,103218,119889,111706,75876],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016973"},{"annotations":[97944,106894,77325,76880,81827,95803],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006405"},{"annotations":[104379],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006404"},{"annotations":[73895,80310,107578,107107],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006409"},{"annotations":[80895],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016031"},{"annotations":[81292],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071528"}]},"cv_name":"biological_process","definition":"A process in which RNA is transported to, or maintained in, a specific location.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule localization","termid":"GO:0033036"}],"gene_count":56,"genes_by_uniquename":{"SJAG_00093":null,"SJAG_00178":null,"SJAG_00298":null,"SJAG_00375":null,"SJAG_00471":null,"SJAG_00641":null,"SJAG_00992":null,"SJAG_01013":null,"SJAG_01065":null,"SJAG_01083":null,"SJAG_01185":null,"SJAG_01374":null,"SJAG_01449":null,"SJAG_01467":null,"SJAG_01529":null,"SJAG_01584":null,"SJAG_01652":null,"SJAG_01715":null,"SJAG_02209":null,"SJAG_02274":null,"SJAG_02425":null,"SJAG_02520":null,"SJAG_02534":null,"SJAG_02661":null,"SJAG_02704":null,"SJAG_02757":null,"SJAG_03002":null,"SJAG_03156":null,"SJAG_03283":null,"SJAG_03299":null,"SJAG_03300":null,"SJAG_03358":null,"SJAG_03470":null,"SJAG_03593":null,"SJAG_03693":null,"SJAG_03729":null,"SJAG_03847":null,"SJAG_03986":null,"SJAG_04017":null,"SJAG_04083":null,"SJAG_04115":null,"SJAG_04148":null,"SJAG_04202":null,"SJAG_04310":null,"SJAG_04347":null,"SJAG_04360":null,"SJAG_04379":null,"SJAG_04472":null,"SJAG_04480":null,"SJAG_04536":null,"SJAG_04589":null,"SJAG_04622":null,"SJAG_04645":null,"SJAG_04656":null,"SJAG_04721":null,"SJAG_05328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"RNA localization","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"RNA localisation","type":"exact"},{"name":"establishment and maintenance of RNA localization","type":"exact"}],"termid":"GO:0006403","terms_by_termid":{"GO:0006404":null,"GO:0006405":null,"GO:0006406":null,"GO:0006409":null,"GO:0016031":null,"GO:0016973":null,"GO:0031990":null,"GO:0051028":null,"GO:0071528":null}}


id: PR:Q9Y7P6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug72 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7P6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 72 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1902.02","synonyms":[{"name":"Spom972h-mug72","type":"exact"}],"termid":"PR:Q9Y7P6"}


id: PBO:0034209
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-differs_in_attribute_of","termid":"PBO:0034209"}


id: PBO:0089809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH-hemoprotein reductase","termid":"PBO:0089809"}


id: GO:0048533
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized floral cell acquires the specialized features of a sporocyte. Sporocytes are the haploid spores of angiosperms. Once formed, they undergo meiotic divisions to form microspores and megaspores.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sporocyte differentiation","synonyms":[{"name":"sporocyte development","type":"narrow"},{"name":"sporocyte morphogenesis","type":"related"}],"termid":"GO:0048533"}


id: MONDO:0042603
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sanderson-Fraser syndrome","secondary_identifiers":["MEDGEN:419081","MESH:C537232","UMLS:C2931450"],"synonyms":[{"name":"Sanderson Fraser syndrome","type":"related"},{"name":"proptosis, Robin association, clenched hands, and multiple abnormalities","type":"related"}],"termid":"MONDO:0042603","xrefs":{"Monarch":{"xref_id":"0042603"}}}


id: MONDO:0016952
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of chromosome 1","termid":"MONDO:0016921"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of the long arm of chromosome 1","secondary_identifiers":["icd11.foundation:73883755","MEDGEN:1642329","NANDO:1200958","NCIT:C36521","GARD:20872","UMLS:C4708598","Orphanet:262833"],"synonyms":[{"name":"1q duplications","type":"related"},{"name":"partial duplication of chromosome 1q","type":"exact"},{"name":"partial duplication of the long arm of chromosome type 1","type":"exact"},{"name":"partial trisomy 1q","type":"related"},{"name":"partial trisomy of chromosome 1q","type":"exact"},{"name":"partial trisomy of the long arm of chromosome 1","type":"exact"}],"termid":"MONDO:0016952","xrefs":{"Monarch":{"xref_id":"0016952"}}}


id: PBO:0039412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANAPC15 pseudogene 2","termid":"PBO:0039412"}


id: FYECO:0000382
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in defined medium containing sucrose, salts and water. May be supplemented with a set of amino acids as per the auxotrophic requirements of the strain.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fructose MM","synonyms":[{"name":"fructose minimal medium","type":"exact"}],"termid":"FYECO:0000382"}


id: PBO:0081734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 665","termid":"PBO:0081734"}


id: GO:0071687
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The part of the horsetail nucleus where telomeres cluster under the SPB and that leads horsetail movement. The horsetail nucleus is the elongated nucleus which forms during the rapid oscillatory movement at meiotic prophase; characterized in Schizosaccharomyces pombe.","definition_xrefs":["GOC:mah","PMID:15030757","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete horsetail nucleus leading edge (obsolete GO:0071687)","termid":"GO:0071687"}


id: PATO:0001290
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A fluorescence quality inhering in a bearer by virtue of emitting light during exposure to radiation from an external source.","definition_xrefs":["web:www.thefreedictionary.com/"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fluorescence","termid":"PATO:0000018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fluorescent","termid":"PATO:0001290"}


id: GO:0010393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving galacturonan, a pectin polymer containing a backbone of alpha-(1->4)-linked D-galacturonic acid residues.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide metabolic process","termid":"GO:0005976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"galacturonan metabolic process","synonyms":[{"name":"galacturonan metabolism","type":"exact"}],"termid":"GO:0010393"}


id: PBO:0001970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARP2/3 actin-organizing complex subunit Arc4","termid":"PBO:0001970"}


id: SO:0000168
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A specific nucleotide sequence of DNA at or near which a particular restriction enzyme cuts the DNA.","definition_xrefs":["SO:ma"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000168 restriction_enzyme_cut_site (obsolete SO:0000168)","termid":"SO:0000168"}


id: PBO:0040122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and SOCS box containing 9","termid":"PBO:0040122"}


id: PBO:0050688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 8 pseudogene 15","termid":"PBO:0050688"}


id: PBO:0064145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PBX/knotted 1 homeobox 2","termid":"PBO:0064145"}


id: PR:O42993
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fkh1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42993"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP12 peptidyl-prolyl cis-trans isomerase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC839.17c","synonyms":[{"name":"FK506-binding protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"FKBP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PPIase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC24E9.17c","type":"related"},{"name":"Spom972h-fkh1","type":"exact"}],"termid":"PR:O42993"}


id: PR:P05933
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A calmodulin that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR23050:SF20","OMA:SCHPO00584"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calmodulin (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A12.14","secondary_identifiers":["UniProtKB:P05933"],"synonyms":[{"name":"CaM (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CALM","type":"exact"}],"termid":"PR:P05933"}


id: GO:0070889
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a platelet alpha granule. A platelet alpha granule is a secretory organelle found in blood platelets.","definition_xrefs":["GOC:rph","PMID:16123220"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule organization","termid":"GO:0033363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"platelet alpha granule organization","synonyms":[{"name":"platelet alpha granule organisation","type":"exact"},{"name":"platelet alpha granule organization and biogenesis","type":"related"},{"name":"platelet alpha-granule organization","type":"exact"}],"termid":"GO:0070889"}


id: FYPO:0002913
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which antisense RNA transcription occurs to a greater extent than normal. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"increased antisense RNA level","termid":"FYPO:0003557"},{"relation_name":"is_a","term_name":"increased transcription during vegetative growth","termid":"FYPO:0000780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000294","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased antisense RNA transcription","synonyms":[{"name":"increased antisense RNA transcription during mitotic cell cycle","type":"related"},{"name":"increased antisense RNA transcription during vegetative growth","type":"exact"},{"name":"increased antisense transcription","type":"exact"},{"name":"increased antisense transcription during vegetative growth","type":"exact"}],"termid":"FYPO:0002913"}


id: PATO:0002221
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's being phosphorylated to a more than normal extent, or fully saturated with phosphate groups.","definition_xrefs":["Wikipedia:http://en.wiktionary.org/wiki/hyperphosphorylated"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"phosphorylated","termid":"PATO:0002220"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased phosphorylation","synonyms":[{"name":"hyperphosphorylated","type":"exact"}],"termid":"PATO:0002221"}


id: PBO:0074196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 39 member 6","termid":"PBO:0074196"}


id: MONDO:0044354
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Rosai-Dorfman disease (obsolete MONDO:0044354)","secondary_identifiers":["NANDO:2200039"],"termid":"MONDO:0044354","xrefs":{"Monarch":{"xref_id":"0044354"}}}


id: PBO:0000151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-oxoprolinase (ATP-hydrolizing) (predicted)","termid":"PBO:0000151"}


id: MONDO:0001862
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pleural cancer","termid":"MONDO:0006294"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant visceral pleura tumor","secondary_identifiers":["DOID:14033","MEDGEN:509311","SCTID:94140004","UMLS:C0153496"],"synonyms":[{"name":"primary malignant neoplasm of visceral pleura","type":"exact"}],"termid":"MONDO:0001862","xrefs":{"Monarch":{"xref_id":"0001862"}}}


id: GO:0044867
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a host organism effects a change in the enzyme activity of a virus with which it is infected.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation by host of viral molecular function","termid":"GO:0044868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation by host of viral catalytic activity","termid":"GO:0044867"}


id: PR:O13852
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- poz1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13852"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protection of telomeres protein poz1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19G12.13c","synonyms":[{"name":"Spom972h-poz1","type":"exact"},{"name":"pot1-associated protein poz1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13852"}


id: GO:0071688
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of proteins to form the myosin-based thick filaments of myofibrils in striated muscle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly involved in morphogenesis","termid":"GO:0010927"},{"relation_name":"is_a","term_name":"myosin filament assembly","termid":"GO:0031034"},{"relation_name":"part_of","term_name":"myofibril assembly","termid":"GO:0030239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003","GO:0030036","GO:0007010"],"is_obsolete":false,"name":"striated muscle myosin thick filament assembly","termid":"GO:0071688"}


id: MONDO:0011747
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"excluded_subClassOf","term_name":"dyslexia","termid":"MONDO:0005489"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dyslexia, susceptibility to, 5","secondary_identifiers":["UMLS:C1847184","OMIM:606896","MEDGEN:337746"],"synonyms":[{"name":"DYX5","type":"exact"},{"name":"dyslexia, susceptibility to, 5","type":"exact"}],"termid":"MONDO:0011747","xrefs":{"Monarch":{"xref_id":"0011747"}}}


id: GO:0030623
data:
  {"annotated_genes":["SJAG_00414","SJAG_04497"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77788,81087],"is_not":false,"summary":null,"term":"GO:0030623"}]},"cv_name":"molecular_function","definition":"Binding to a U5 small nuclear RNA (U5 snRNA).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA binding","termid":"GO:0017069"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00414":null,"SJAG_04497":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003674","GO:0003723","GO:0005488"],"is_obsolete":false,"name":"U5 snRNA binding","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0030623","terms_by_termid":{"GO:0030623":null}}


id: PBO:0070576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 42","termid":"PBO:0070576"}


id: GO:1905815
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of dorsal/ventral axon guidance.","definition_xrefs":["PMID:18434533","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of axon guidance","termid":"GO:1902667"},{"relation_name":"regulates","term_name":"dorsal/ventral axon guidance","termid":"GO:0033563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of dorsal/ventral axon guidance","synonyms":[{"name":"regulation of dorsal-ventral axon guidance","type":"exact"},{"name":"regulation of dorsal/ventral axon pathfinding","type":"exact"},{"name":"regulation of dorsoventral axon guidance","type":"exact"}],"termid":"GO:1905815"}


id: GO:0034630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a RITS complex is transported to, or maintained in, a specific location.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"RITS complex localization","synonyms":[{"name":"RITS complex localisation","type":"exact"},{"name":"establishment and maintenance of RITS complex localization","type":"exact"}],"termid":"GO:0034630"}


id: PBO:0040620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRAF-activated non-protein coding RNA","termid":"PBO:0040620"}


id: GO:0000001
data:
  {"annotated_genes":["SJAG_02848"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104590],"is_not":false,"summary":null,"term":"GO:0000001"}]},"cv_name":"biological_process","definition":"The distribution of mitochondria, including the mitochondrial genome, into daughter cells after mitosis or meiosis, mediated by interactions between mitochondria and the cytoskeleton.","definition_xrefs":["GOC:mcc","PMID:10873824","PMID:11389764"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle inheritance","termid":"GO:0048308"},{"relation_name":"is_a","term_name":"mitochondrion distribution","termid":"GO:0048311"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02848":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"mitochondrion inheritance","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrial inheritance","type":"exact"}],"termid":"GO:0000001","terms_by_termid":{"GO:0000001":null}}


id: MONDO:0000157
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete episodic pain syndrome, familial (obsolete MONDO:0000157)","termid":"MONDO:0000157","xrefs":{"Monarch":{"xref_id":"0000157"}}}


id: FYPO:0003428
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize arginine or cysteine, and therefore requires arginine and cysteine in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth auxotrophic for arginine","termid":"FYPO:0000035"},{"relation_name":"is_a","term_name":"growth auxotrophic for cysteine","termid":"FYPO:0000037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"growth auxotrophic for arginine and cysteine","synonyms":[{"name":"arginine and cysteine auxotrophy","type":"exact"},{"name":"growth auxotrophic for arginine and cysteine during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for arginine and cysteine during vegetative growth","type":"exact"}],"termid":"FYPO:0003428"}


id: MONDO:0003157
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Syndromes of bone destruction where the cause is not obvious such as neoplasia, infection, or trauma. The destruction follows various patterns: massive (Gorham disease), multicentric (hajdu-cheney syndrome), or carpal/tarsal.","definition_xrefs":["MESH:D010015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disappearing bone disease","secondary_identifiers":["UMLS:C0029436","NANDO:1200878","NANDO:1200880","ICD9:733.09","SCTID:240161003","DOID:4837","MEDGEN:45247"],"synonyms":[{"name":"Gorham's disease","type":"related"},{"name":"Gorham-Stout syndrome","type":"related"},{"name":"essential osteolysis","type":"exact"},{"name":"massive osteolysis","type":"related"},{"name":"phantom bone disease","type":"exact"}],"termid":"MONDO:0003157","xrefs":{"Monarch":{"xref_id":"0003157"}}}


id: FYPO:0007266
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the endoplasmic reticulum (ER) colocalizes with eisosomes to a lower extent than normal.","definition_xrefs":["PMID:32023460","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cortical endoplasmic reticulum organization","termid":"FYPO:0007571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased colocalization of cortical endoplasmic reticulum with eisosomes","synonyms":[{"name":"decreased colocalization of cortical ER with eisosomes","type":"exact"},{"name":"decreased colocalization of cortical endoplasmic reticulum with eisosomes during mitotic cell cycle","type":"related"},{"name":"decreased colocalization of cortical endoplasmic reticulum with eisosomes during vegetative growth","type":"exact"},{"name":"decreased colocalization of tubular cortical ER with eisosomes","type":"exact"},{"name":"decreased cortical ER-eisosome colocalization","type":"exact"},{"name":"reduced colocalization of cortical endoplasmic reticulum with eisosomes","type":"exact"}],"termid":"FYPO:0007266"}


id: GO:0140673
data:
  {"annotated_genes":["SJAG_00293","SJAG_04038","SJAG_03128","SJAG_04257","SJAG_00925","SJAG_04670","SJAG_00913","SJAG_02319","SJAG_00320","SJAG_02698","SJAG_03006","SJAG_00914","SJAG_02873","SJAG_02416","SJAG_02314"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91879,93055,94193,95203,96424,97299,105385,110620,110625,113129,115466,116405,118072,118767,120727],"is_not":false,"summary":null,"term":"GO:0140673"}]},"cv_name":"biological_process","definition":"A chromatin remodeling process that reestablishes the chromatin structure following the passage of RNA polymerase II during transcription elongation, thus preventing cryptic transcription initiation.","definition_xrefs":["PMID:22922743","PMID:28053344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin remodeling","termid":"GO:0006338"},{"relation_name":"part_of","term_name":"transcription elongation by RNA polymerase II","termid":"GO:0006368"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00293":null,"SJAG_00320":null,"SJAG_00913":null,"SJAG_00914":null,"SJAG_00925":null,"SJAG_02314":null,"SJAG_02319":null,"SJAG_02416":null,"SJAG_02698":null,"SJAG_02873":null,"SJAG_03006":null,"SJAG_03128":null,"SJAG_04038":null,"SJAG_04257":null,"SJAG_04670":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"part_of","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0006325","GO:0006351","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"transcription elongation-coupled chromatin remodeling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA replication-independent chromatin organization","type":"related"},{"name":"chromatin maintenance during transcription elongation","type":"related"},{"name":"co-transcriptional chromatin reassembly","type":"exact"},{"name":"euchromatin maintenance during transcription elongation","type":"exact"},{"name":"maintenance of chromatin integrity during transcription elongation by RNAPII","type":"exact"},{"name":"maintenance of transcriptionally active chromatin during transcription elongation","type":"exact"},{"name":"transciptional elongation-coupled chromatin remodeling","type":"exact"},{"name":"transcription elongation coupled chromatin remodeling","type":"exact"},{"name":"transcriptional elongation-coupled chromatin remodeling","type":"exact"}],"termid":"GO:0140673","terms_by_termid":{"GO:0140673":null}}


id: PBO:0074200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 39 member 10","termid":"PBO:0074200"}


id: GO:0097003
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an adipokinetic hormone to initiate a change in cell activity. Adipokinetic hormones (AKHs) are protein or peptide hormones that are important for sugar and fat homeostasis in metazoa. In insects, they mobilize sugar and lipids from the insect fat body during energy-requiring activities such as flight and locomotion. They also contribute to hemolymph sugar homeostasis.","definition_xrefs":["PMID:11904407","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-hormone receptor activity","termid":"GO:0016500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"adipokinetic hormone receptor activity","synonyms":[{"name":"AKH receptor activity","type":"exact"}],"termid":"GO:0097003"}


id: PR:O59813
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC794.03 gene.","definition_xrefs":["UniProtKB:O59813","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized amino-acid permease C794.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC794.03","synonyms":[{"name":"Spom972h-SPCC794.03","type":"exact"}],"termid":"PR:O59813"}


id: GO:0061566
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of introducing a phosphate group into CMP, cytidine monophosphate, to produce CDP. Addition of two phosphate groups produces CTP.","definition_xrefs":["PMID:23416111","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside monophosphate phosphorylation","termid":"GO:0046940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"CMP phosphorylation","termid":"GO:0061566"}


id: GO:0048937
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process aimed at the progression of a lateral line glial cell over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell development","termid":"GO:0021782"},{"relation_name":"part_of","term_name":"lateral line nerve glial cell differentiation","termid":"GO:0048895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral line nerve glial cell development","termid":"GO:0048937"}


id: PBO:0070507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 6","termid":"PBO:0070507"}


id: PBO:0070622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 like 1 pseudogene 6","termid":"PBO:0070622"}


id: GO:0062045
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysine + pyruvate= epsilon-amino-alpha-ketocaproic acid (KAC) + alanine.","definition_xrefs":["PMID:28330936","PMID:27758894"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016769","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"L-lysine alpha-aminotransferase","termid":"GO:0062045"}


id: PBO:0070739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10a pseudogene 9","termid":"PBO:0070739"}


id: PBO:0042270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin containing TCP1 subunit 6 pseudogene 5","termid":"PBO:0042270"}


id: PBO:0027171
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_mitotic_spindle_during_mitosis","termid":"PBO:0027171"}


id: MONDO:0003763
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An anxiety disorder precipitated by an experience of intense fear or horror while exposed to a traumatic (especially life-threatening) event. The disorder is characterized by dissociative symptoms; vivid recollections of the traumatic event; avoidance of stimuli associated with the traumatic event; and a constant state of hyperarousal for no more than one month.","definition_xrefs":["NCIT:C92621"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anxiety disorder","termid":"MONDO:0005618"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute stress disorder","secondary_identifiers":["MESH:D000068099","ICD9:308.3","MEDGEN:116022","Wikipedia:Acute_stress_reaction","DOID:6088","UMLS:C0236816","SCTID:67195008","EFO:0005223","ICD10CM:F43.0","ICD9:308.9"],"synonyms":[{"name":"acute stress reaction","type":"exact"},{"name":"traumatic stress disorder","type":"exact"}],"termid":"MONDO:0003763","xrefs":{"Monarch":{"xref_id":"0003763"}}}


id: PBO:0005343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urease accessory protein UREG (predicted)","termid":"PBO:0005343"}


id: GO:0015583
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: protein N-phosphohistidine + beta-glucoside(out) = protein histidine + beta-glucoside phosphate(in). The beta-glucoside may be arbutin, salicin or cellobiose.","definition_xrefs":["GOC:ai","GOC:mtg_transport","ISBN:0815340729"],"gene_count":0,"genotype_count":0,"name":"obsolete beta-glucoside [arbutin-salicin-cellobiose] permease activity (obsolete GO:0015583)","synonyms":[{"name":"beta-glucoside [arbutin-salicin-cellobiose] permease activity","type":"exact"}],"termid":"GO:0015583"}


id: GO:0070109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of an interleukin-27-mediated signaling pathway.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine-mediated signaling pathway","termid":"GO:0001961"},{"relation_name":"is_a","term_name":"regulation of interleukin-27-mediated signaling pathway","termid":"GO:0070107"},{"relation_name":"positively_regulates","term_name":"interleukin-27-mediated signaling pathway","termid":"GO:0070106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of interleukin-27-mediated signaling pathway","synonyms":[{"name":"positive regulation of IL-27-mediated signaling pathway","type":"exact"},{"name":"positive regulation of IL27RA/IL6ST signaling pathway","type":"exact"},{"name":"positive regulation of interleukin-27-mediated signalling pathway","type":"exact"}],"termid":"GO:0070109"}


id: PBO:0064698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 34","termid":"PBO:0064698"}


id: PBO:0066025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAN binding protein 6","termid":"PBO:0066025"}


id: GO:0141051
data:
  {"annotated_genes":["SJAG_00581","SJAG_03627","SJAG_04186"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111321],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140937"},{"annotations":[99029,111322],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034739"},{"annotations":[79090],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046970"},{"annotations":[111323],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180032"},{"annotations":[111324],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180033"}]},"cv_name":"molecular_function","definition":"Removal of an acetyl group from a lysine residue in a histone H4.","definition_xrefs":["PMID:12590135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone deacetylase activity","termid":"GO:0004407"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00581":null,"SJAG_03627":null,"SJAG_04186":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0033558"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0019213"}],"interesting_parent_ids":["GO:0033558","GO:0140096","GO:0003824","GO:0003674","GO:0019213"],"is_obsolete":false,"name":"histone H4K deacetylase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0141051","terms_by_termid":{"GO:0034739":null,"GO:0046970":null,"GO:0140937":null,"GO:0180032":null,"GO:0180033":null}}


id: GO:0051771
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of a nitric-oxide synthase enzyme.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of nitric-oxide synthase biosynthetic process (obsolete GO:0051771)","synonyms":[{"name":"down regulation of nitric-oxide synthase 2 biosynthetic process","type":"narrow"},{"name":"down regulation of nitric-oxide synthase biosynthetic process","type":"exact"},{"name":"down-regulation of nitric-oxide synthase 2 biosynthetic process","type":"narrow"},{"name":"down-regulation of nitric-oxide synthase biosynthetic process","type":"exact"},{"name":"downregulation of nitric-oxide synthase 2 biosynthetic process","type":"narrow"},{"name":"downregulation of nitric-oxide synthase biosynthetic process","type":"exact"},{"name":"inhibition of nitric-oxide synthase 2 biosynthetic process","type":"narrow"},{"name":"inhibition of nitric-oxide synthase biosynthetic process","type":"narrow"},{"name":"negative regulation of NO synthase biosynthesis","type":"exact"},{"name":"negative regulation of NO synthase biosynthetic process","type":"exact"},{"name":"negative regulation of NOS biosynthesis","type":"exact"},{"name":"negative regulation of NOS biosynthetic process","type":"exact"},{"name":"negative regulation of NOS2 synthase biosynthesis","type":"narrow"},{"name":"negative regulation of NOS2 synthase biosynthetic process","type":"narrow"},{"name":"negative regulation of nitric-oxide synthase (type 2) biosynthesis","type":"narrow"},{"name":"negative regulation of nitric-oxide synthase (type 2) biosynthetic process","type":"narrow"},{"name":"negative regulation of nitric-oxide synthase (type II) biosynthesis","type":"narrow"},{"name":"negative regulation of nitric-oxide synthase (type II) biosynthetic process","type":"narrow"},{"name":"negative regulation of nitric-oxide synthase 2 biosynthetic process","type":"narrow"}],"termid":"GO:0051771"}


id: GO:0004396
data:
  {"annotated_genes":["SJAG_04495","SJAG_04334"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77837,71955],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008865"},{"annotations":[71952,77834],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004340"},{"annotations":[77838,99815],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019158"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + D-hexose = ADP + D-hexose 6-phosphate.","definition_xrefs":["EC:2.7.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"carbohydrate kinase activity","termid":"GO:0019200"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04334":null,"SJAG_04495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"hexokinase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:HEXOKINASE-RXN","RHEA:22740"],"synonyms":[{"name":"ATP-dependent hexokinase activity","type":"related"},{"name":"ATP:D-hexose 6-phosphotransferase activity","type":"related"},{"name":"glucose ATP phosphotransferase activity","type":"related"},{"name":"hexokinase (phosphorylating)","type":"related"},{"name":"hexokinase D","type":"related"},{"name":"hexokinase type I activity","type":"narrow"},{"name":"hexokinase type II activity","type":"narrow"},{"name":"hexokinase type III activity","type":"narrow"},{"name":"hexokinase type IV","type":"related"},{"name":"hexokinase type IV (glucokinase) activity","type":"narrow"},{"name":"hexokinase type IV glucokinase activity","type":"related"}],"termid":"GO:0004396","terms_by_termid":{"GO:0004340":null,"GO:0008865":null,"GO:0019158":null}}


id: GO:0007156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a plasma membrane adhesion molecule in one cell to an identical molecule in an adjacent cell.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion via plasma-membrane adhesion molecules","termid":"GO:0098742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"homophilic cell adhesion via plasma membrane adhesion molecules","termid":"GO:0007156"}


id: PR:P50530
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sck1 gene.","definition_xrefs":["UniProtKB:P50530","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase sck1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B9.02c","synonyms":[{"name":"Spom972h-sck1","type":"exact"}],"termid":"PR:P50530"}


id: GO:0010507
data:
  {"annotated_genes":["SJAG_00457","SJAG_03371","SJAG_02723"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74272,78184],"is_not":false,"summary":null,"term":"GO:0010507"},{"annotations":[108486],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016242"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of autophagy. Autophagy is the process in which cells digest parts of their own cytoplasm.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"regulation of autophagy","termid":"GO:0010506"},{"relation_name":"negatively_regulates","term_name":"autophagy","termid":"GO:0006914"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00457":null,"SJAG_02723":null,"SJAG_03371":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006914"},{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006914"],"is_obsolete":false,"name":"negative regulation of autophagy","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0010507","terms_by_termid":{"GO:0010507":null,"GO:0016242":null}}


id: PBO:0082145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acyl-CoA-binding protein; transports newly synthesized acyl-CoA esters from fatty acid synthetase (Fas1p-Fas2p) to acyl-CoA-consuming processes; subject to starvation-induced, Grh1p-mediated unconventional secretion; protein abundance increases in response to DNA replication stress","termid":"PBO:0082145"}


id: PBO:0082371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Basic leucine zipper (bZIP) transcription factor","termid":"PBO:0082371"}


id: GO:0001822
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and/or excretes the end products of body metabolism in the form of urine.","definition_xrefs":["GOC:dph","GOC:mtg_kidney_jan10","ISBN:0721662544","ISBN:0124020607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"},{"relation_name":"part_of","term_name":"renal system development","termid":"GO:0072001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"kidney development","secondary_identifiers":["Reactome:R-HSA-9830369","Wikipedia:Kidney_development"],"synonyms":[{"name":"nephrogenesis","type":"related"}],"termid":"GO:0001822"}


id: PR:000030005
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe ypt5 gene.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein ypt5 (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC6F6.15","synonyms":[{"name":"SPAC6F6.15","type":"related"},{"name":"Spom-ypt5","type":"exact"}],"termid":"PR:000030005"}


id: PBO:0089007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane potassium ion transmembrane transporter Trk1","termid":"PBO:0089007"}


id: GO:0021968
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the migration of an axon growth cone of a pyramidal cell that is part of the corticospinal tract is directed after exiting the cerebral cortex through the internal capsule in response to a combination of attractive and repulsive cues.","definition_xrefs":["PMID:9878731","GOC:dgh","GOC:cls","GO_REF:0000021","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon guidance","termid":"GO:0007411"},{"relation_name":"part_of","term_name":"corticospinal neuron axon guidance","termid":"GO:0021966"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"corticospinal neuron axon guidance through the internal capsule","synonyms":[{"name":"corticospinal neuron axon pathfinding through the internal capsule","type":"exact"}],"termid":"GO:0021968"}


id: GO:0036054
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: protein-malonyllysine + H2O => protein-lysine + malonate. This reaction is the removal of a malonyl group (CO-CH2-CO) from a malonylated lysine residue of a protein or peptide.","definition_xrefs":["GOC:sp","PMID:22076378","PMID:21908771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0016810","GO:0140096","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"protein-malonyllysine demalonylase activity","synonyms":[{"name":"peptidyl-malonyllysine demalonylase activity","type":"exact"},{"name":"protein lysine demalonylation activity","type":"exact"},{"name":"protein malonyl lysine demalonylation activity","type":"exact"}],"termid":"GO:0036054"}


id: PBO:0065712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parvalbumin like EF-hand containing","termid":"PBO:0065712"}


id: PBO:0083821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential subunit of the Dam1 complex (aka DASH complex); complex couples kinetochores to the force produced by MT depolymerization thereby aiding in chromosome segregation; also localized to nuclear side of spindle pole body","termid":"PBO:0083821"}


id: PBO:0066893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 193","termid":"PBO:0066893"}


id: MOD:01805
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-aspartic acid residue and a glycine residue by an isopeptide bond with formation of N-(L-isoaspartyl)-glycine and the release of water.","definition_xrefs":["RESID:AA0126","PubMed:1826288","PubMed:18671394","ChEBI:21479"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"N-(L-isoaspartyl)-glycine","termid":"MOD:01928"},{"relation_name":"is_a","term_name":"crosslinked L-aspartic acid residue","termid":"MOD:02043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-(L-isoaspartyl)-glycine (Asp)","synonyms":[{"name":"(2S)-2-amino-4-(carboxymethyl)amino-4-oxobutanoic acid","type":"exact"},{"name":"2-amino-N4-(carboxymethyl)-butanediamic acid","type":"exact"},{"name":"CROSSLNK Isoaspartyl glycine isopeptide (Asp-Gly)","type":"exact"},{"name":"CROSSLNK Isoaspartyl glycine isopeptide (Gly-Asp)","type":"exact"},{"name":"N-(L-isoaspartyl)-glycine","type":"exact"},{"name":"N-beta-aspartylglycine","type":"exact"},{"name":"N4-(carboxymethyl)-asparagine","type":"exact"},{"name":"isoaspartyl glycine","type":"exact"}],"termid":"MOD:01805"}


id: GO:0008503
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with benzodiazepines, a class of drugs with hypnotic, anxiolytic, anticonvulsive, amnestic and myorelaxant properties, to initiate a change in cell activity.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter receptor activity","termid":"GO:0030594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"benzodiazepine receptor activity","termid":"GO:0008503"}


id: PR:Q9UUC9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mdm34 gene.","definition_xrefs":["UniProtKB:Q9UUC9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial distribution and morphology protein 34 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19C2.11c","synonyms":[{"name":"Spom972h-mdm34","type":"exact"}],"termid":"PR:Q9UUC9"}


id: PBO:0090721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermidine synthase Srm1","termid":"PBO:0090721"}


id: GO:0052377
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process by which an organism avoids the effects of phytoalexins produced as a defense response by the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete evasion or tolerance by organism of symbiont-produced phytoalexins (obsolete GO:0052377)","synonyms":[{"name":"evasion or tolerance by organism of symbiont phytoalexins","type":"exact"},{"name":"evasion or tolerance by organism of symbiont-produced phytoalexins","type":"exact"},{"name":"evasion or tolerance of phytoalexins produced by symbiont in response to organism","type":"exact"},{"name":"symbiont phytoalexin detoxification","type":"narrow"}],"termid":"GO:0052377"}


id: FYPO:0006296
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which negative regulation of transcription by glucose (glucose repression) occurs to a greater extent than normal. Specific genes that are normally not transcribed in the presence of glucose are not derepressed in the mutant under conditions that derepress transcription in wild type cells.","definition_xrefs":["GO:0045014","PomBase:mah","PMID:20139237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal negative regulation of transcription by glucose","termid":"FYPO:0000044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000298","FYPO:0006551","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased negative regulation of transcription by glucose","synonyms":[{"name":"glucose repression defects","type":"related"},{"name":"increased glucose repression","type":"exact"},{"name":"increased glucose repression during vegetative growth","type":"exact"},{"name":"increased negative regulation of transcription by glucose during mitotic cell cycle","type":"related"},{"name":"increased negative regulation of transcription by glucose during vegetative growth","type":"exact"},{"name":"increased transcription of glucose starvation gene during vegetative growth","type":"related"}],"termid":"FYPO:0006296"}


id: MONDO:1011844
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertrophic neuropathy, non-human animal","secondary_identifiers":["OMIA:000518"],"termid":"MONDO:1011844","xrefs":{"Monarch":{"xref_id":"1011844"}}}


id: PBO:0068327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 32","termid":"PBO:0068327"}


id: GO:0005152
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Blocks the binding of interleukin-1 to the interleukin-1 receptor complex.","definition_xrefs":["GOC:ebc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"},{"relation_name":"is_a","term_name":"interleukin-1 binding","termid":"GO:0019966"},{"relation_name":"is_a","term_name":"receptor antagonist activity","termid":"GO:0048019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0140678","GO:0098772","GO:0003674"],"is_obsolete":false,"name":"interleukin-1 receptor antagonist activity","synonyms":[{"name":"IL-1ra","type":"exact"}],"termid":"GO:0005152"}


id: MONDO:0001761
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition associated with glucose-6-phosphate dehydrogenase deficiency, which is characterized by hemolysis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G6PD deficiency","termid":"MONDO:0005775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"favism","secondary_identifiers":["SCTID:191172001","UMLS:C0015702","MESH:D005236","MEDGEN:4667","DOID:13628","NCIT:C34607"],"termid":"MONDO:0001761","xrefs":{"Monarch":{"xref_id":"0001761"}}}


id: PBO:0002907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNF2 family helicase Swr1","termid":"PBO:0002907"}


id: PBO:0070841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 20","termid":"PBO:0070841"}


id: MONDO:0020006
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare hematologic disease (obsolete MONDO:0020006)","termid":"MONDO:0020006","xrefs":{"Monarch":{"xref_id":"0020006"}}}


id: PBO:0062934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P3R3URF-PIK3R3 readthrough","termid":"PBO:0062934"}


id: MONDO:0007211
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Brachydactyly - arterial hypertension is a rare genetic brachydactyly syndrome characterized by the association of brachydactyly type E with hypertension (due to vascular or neurovascular anomalies) as well as the additional features of short stature and low birth weight (compared to non-affected family members), stocky build and a round face. The onset of hypertension is often in childhood and, if untreated, most patients will have had a stroke by the age of 50.","definition_xrefs":["Orphanet:1276"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"},{"relation_name":"is_a","term_name":"brachydactyly","termid":"MONDO:0021004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"brachydactyly-arterial hypertension syndrome","secondary_identifiers":["MESH:C537095","SCTID:720568003","DOID:0111247","UMLS:C1862170","GARD:967","MEDGEN:349445","OMIM:112410"],"synonyms":[{"name":"Bilginturan brachydactyly","type":"exact"},{"name":"Bilginturan syndrome","type":"exact"},{"name":"HTNB","type":"related"},{"name":"brachydactyly type E with short stature and hypertension","type":"related"},{"name":"brachydactyly type E, with short stature and hypertension","type":"exact"},{"name":"brachydactyly with hypertension","type":"related"},{"name":"brachydactyly, type E, with short stature and hypertension","type":"related"},{"name":"hypertension and brachydactyly syndrome","type":"related"}],"termid":"MONDO:0007211","xrefs":{"Monarch":{"xref_id":"0007211"}}}


id: PBO:0074217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 44 member 3","termid":"PBO:0074217"}


id: FYPO:0004640
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of CAAX-protein geranylgeranyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0000707","FYPO:0001985","FYPO:0000661"],"is_obsolete":false,"name":"abnormal CAAX-protein geranylgeranyltransferase activity","termid":"FYPO:0004640"}


id: RO:0002007
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"X outer_layer_of Y iff:\\n. X :continuant that bearer_of some PATO:laminar\\n. X part_of Y\\n. exists Z :surface\\n. X has_boundary Z\\n. Z boundary_of Y\\n\\nhas_boundary: http://purl.obolibrary.org/obo/RO_0002002\\nboundary_of: http://purl.obolibrary.org/obo/RO_0002000","direct_ancestors":[{"relation_name":"is_a","term_name":"part_of","termid":"BFO:0000050"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bounding_layer_of","termid":"RO:0002007"}


id: GO:0010513
data:
  {"annotated_genes":["SJAG_02613"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[119397],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902648"}]},"cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of phosphatidylinositol.","definition_xrefs":["GOC:vw","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphatidylinositol biosynthetic process","termid":"GO:0010511"},{"relation_name":"is_a","term_name":"positive regulation of phospholipid biosynthetic process","termid":"GO:0071073"},{"relation_name":"positively_regulates","term_name":"phosphatidylinositol biosynthetic process","termid":"GO:0006661"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"positive regulation of phosphatidylinositol biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010513","terms_by_termid":{"GO:1902648":null}}


id: PBO:0062265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily F member 2 pseudogene","termid":"PBO:0062265"}


id: PBO:0078176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta joining 2-1","termid":"PBO:0078176"}


id: PBO:0000968
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.26.5","termid":"PBO:0000968"}


id: GO:0010849
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate of ATP hydrolysis by an ATPase. Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of proton transport","termid":"GO:0010155"},{"relation_name":"is_a","term_name":"regulation of monoatomic ion transmembrane transporter activity","termid":"GO:0032412"},{"relation_name":"is_a","term_name":"regulation of ATP-dependent activity","termid":"GO:0043462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"regulation of proton-transporting ATPase activity, rotational mechanism","synonyms":[{"name":"regulation of V-type ATPase activity","type":"broad"},{"name":"regulation of hydrogen ion transporting ATPase activity, rotational mechanism","type":"exact"}],"termid":"GO:0010849"}


id: GO:0019205
data:
  {"annotated_genes":["SJAG_01070","SJAG_03708","SJAG_04657","SJAG_04849","SJAG_00533","SJAG_03789","SJAG_03798","SJAG_02038","SJAG_02887","SJAG_00956","SJAG_00779","SJAG_01791","SJAG_01979","SJAG_02680"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71734],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004001"},{"annotations":[73637,73841],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004017"},{"annotations":[89944,72432],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046404"},{"annotations":[95279],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051736"},{"annotations":[94787,116781],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043771"},{"annotations":[72777],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004798"},{"annotations":[119899],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120136"},{"annotations":[77669],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004385"},{"annotations":[62337],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051730"},{"annotations":[77888,72776],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004550"},{"annotations":[73268],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051731"},{"annotations":[82167],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033862"},{"annotations":[94788,80776],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004849"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a phosphate group, usually from ATP or GTP, to a nucleobase, nucleoside, nucleotide or polynucleotide substrate.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00533":null,"SJAG_00779":null,"SJAG_00956":null,"SJAG_01070":null,"SJAG_01791":null,"SJAG_01979":null,"SJAG_02038":null,"SJAG_02680":null,"SJAG_02887":null,"SJAG_03708":null,"SJAG_03789":null,"SJAG_03798":null,"SJAG_04657":null,"SJAG_04849":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016301","GO:0003674"],"is_obsolete":false,"name":"nucleobase-containing compound kinase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"nucleobase, nucleoside, nucleotide kinase activity","type":"related"}],"termid":"GO:0019205","terms_by_termid":{"GO:0004001":null,"GO:0004017":null,"GO:0004385":null,"GO:0004550":null,"GO:0004798":null,"GO:0004849":null,"GO:0033862":null,"GO:0043771":null,"GO:0046404":null,"GO:0051730":null,"GO:0051731":null,"GO:0051736":null,"GO:0120136":null}}


id: PBO:0119656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S47/3-hydroxyisobutyryl-CoA hydrolase fusion protein Snr1","termid":"PBO:0119656"}


id: GO:0032028
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the head/neck region of a myosin heavy chain.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin heavy chain binding","termid":"GO:0032036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0008092","GO:0005488"],"is_obsolete":false,"name":"myosin head/neck binding","termid":"GO:0032028"}


id: PBO:0053770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1015","termid":"PBO:0053770"}


id: PBO:0067200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 265, pseudogene","termid":"PBO:0067200"}


id: PBO:0058383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4755","termid":"PBO:0058383"}


id: MONDO:0019787
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Severe-immune mediated enteropathy describes a variety of intestinal disorders that can range from a serious, early-onset systemic disease (IPEX) to a mild isolated gastrointestinal disease. In children it manifests with severe diarrhea and dehydration in the presence of characteristic antibodies (anti-enterocyte and anti-goblet cell) and in adults with chronic diarrhea, malabsorption and weight loss.","definition_xrefs":["Orphanet:94075"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disorder of gastrointestinal tract","termid":"MONDO:0000588"},{"relation_name":"is_a","term_name":"malabsorption syndrome","termid":"MONDO:0020598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"autoimmune enteropathy","secondary_identifiers":["MESH:C538273","ICD9:279.49","NCIT:C94694","GARD:8689","SCTID:235728001","UMLS:C0341305","NANDO:2200923","MEDGEN:83322"],"synonyms":[{"name":"immune-mediated protracted diarrhea of infancy","type":"exact"},{"name":"immune-mediated protracted diarrhoea of infancy","type":"exact"},{"name":"severe immune-mediated enteropathy","type":"exact"}],"termid":"MONDO:0019787","xrefs":{"Monarch":{"xref_id":"0019787"}}}


id: PR:Q06975
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An H/ACA ribonucleoprotein complex subunit 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03642","PANTHER:PTHR23237:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H/ACA ribonucleoprotein complex subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC20F10.01","secondary_identifiers":["UniProtKB:Q06975"],"synonyms":[{"name":"Spom972h-GAR1","type":"exact"},{"name":"snoRNP protein GAR1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q06975"}


id: MONDO:1011845
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital hypomyelinogenesis, non-human animal","secondary_identifiers":["OMIA:000527"],"termid":"MONDO:1011845","xrefs":{"Monarch":{"xref_id":"1011845"}}}


id: GO:2000689
data:
  {"annotated_genes":["SJAG_00938","SJAG_04498","SJAG_02864","SJAG_04621"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109973,91142,99842,100100],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071520"},{"annotations":[79162],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903479"}]},"cv_name":"biological_process","definition":"An actin filament organization process that contributes to actomyosin contractile ring assembly during cytokinesis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament organization","termid":"GO:0007015"},{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"part_of","term_name":"actomyosin contractile ring assembly","termid":"GO:0000915"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_02864":null,"SJAG_04498":null,"SJAG_04621":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0007010","GO:0007049","GO:0030036"],"is_obsolete":false,"name":"actomyosin contractile ring assembly actin filament organization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"actin filament organisation of constriction ring assembly","type":"related"},{"name":"actin filament organisation of contractile ring assembly","type":"exact"},{"name":"actin filament organisation of cytokinesis, actomyosin contractile ring assembly","type":"exact"},{"name":"actin filament organisation of cytokinesis, actomyosin contractile ring formation","type":"related"},{"name":"actin filament organisation of cytokinesis, actomyosin ring biosynthesis","type":"related"},{"name":"actin filament organisation of cytokinesis, actomyosin ring formation","type":"related"},{"name":"actin filament organisation of cytokinesis, contractile ring assembly","type":"related"},{"name":"actin filament organization involved in cytokinetic actomyosin contractile ring assembly","type":"exact"},{"name":"actin filament organization of constriction ring assembly","type":"related"},{"name":"actin filament organization of contractile ring assembly","type":"exact"},{"name":"actin filament organization of cytokinesis, actomyosin contractile ring assembly","type":"exact"},{"name":"actin filament organization of cytokinesis, actomyosin contractile ring formation","type":"related"},{"name":"actin filament organization of cytokinesis, actomyosin ring biosynthesis","type":"related"},{"name":"actin filament organization of cytokinesis, actomyosin ring formation","type":"related"},{"name":"actin filament organization of cytokinesis, contractile ring assembly","type":"related"},{"name":"regulation of actin filament localization of constriction ring assembly","type":"related"},{"name":"regulation of actin filament localization of contractile ring assembly","type":"related"},{"name":"regulation of actin filament localization of cytokinesis, actomyosin contractile ring assembly","type":"related"},{"name":"regulation of actin filament localization of cytokinesis, actomyosin contractile ring formation","type":"related"},{"name":"regulation of actin filament localization of cytokinesis, actomyosin ring biosynthesis","type":"related"},{"name":"regulation of actin filament localization of cytokinesis, actomyosin ring formation","type":"related"},{"name":"regulation of actin filament localization of cytokinesis, contractile ring assembly","type":"related"}],"termid":"GO:2000689","terms_by_termid":{"GO:0071520":null,"GO:1903479":null}}


id: GO:0099512
data:
  {"annotated_genes":["SJAG_01837","SJAG_02509","SJAG_04003","SJAG_03145","SJAG_00930","SJAG_00113","SJAG_01993","SJAG_00851","SJAG_01196","SJAG_05024","SJAG_00655","SJAG_00140","SJAG_02040","SJAG_00918","SJAG_01224","SJAG_02566","SJAG_03703","SJAG_00773","SJAG_04745","SJAG_05220","SJAG_02286","SJAG_03264","SJAG_00594","SJAG_02761","SJAG_02396","SJAG_04387","SJAG_02624","SJAG_01215","SJAG_03052","SJAG_05266","SJAG_04887","SJAG_02695","SJAG_01297","SJAG_01613","SJAG_02651","SJAG_00723","SJAG_00332","SJAG_02045","SJAG_00030","SJAG_01775","SJAG_01546","SJAG_02431","SJAG_02336","SJAG_03088","SJAG_04841","SJAG_03073","SJAG_00845","SJAG_01330","SJAG_03540"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[77283,110895,78475,97098,73198],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005884"},{"annotations":[109044,113980,101019,105830,109257],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000235"},{"annotations":[100425,103244,93187,101020,105699,110082],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0055028"},{"annotations":[99385,105562,97018],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903754"},{"annotations":[76828],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097268"},{"annotations":[70176,106692,92958,106363,114618],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005881"},{"annotations":[99080],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0062194"},{"annotations":[102185,104139,105701,115897,120529,98783,91434],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904511"},{"annotations":[89566],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990574"},{"annotations":[69590,75582,98578,121182],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005874"},{"annotations":[102188,101025],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0036449"},{"annotations":[72453,81189,81747,106474,121062,63078,101027],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0035371"},{"annotations":[80580,63079,93191],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061673"},{"annotations":[98786],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905721"},{"annotations":[109337],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990941"},{"annotations":[103249,102190,66726,108145],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990498"},{"annotations":[100429,101030,109338,120009],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990537"},{"annotations":[119738,99462],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032982"},{"annotations":[93194],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005880"},{"annotations":[103252,96587],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005827"},{"annotations":[98787,103253],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905759"},{"annotations":[93196],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905760"},{"annotations":[102341,91562,105514,77555,77994,64009,78651],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005876"},{"annotations":[72119],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0055120"}]},"cv_name":"cellular_component","definition":"A polymer consisting of an indefinite number of protein or protein complex subunits that have polymerised to form a fiber-shaped structure.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"supramolecular polymer","termid":"GO:0099081"}],"gene_count":49,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_00113":null,"SJAG_00140":null,"SJAG_00332":null,"SJAG_00594":null,"SJAG_00655":null,"SJAG_00723":null,"SJAG_00773":null,"SJAG_00845":null,"SJAG_00851":null,"SJAG_00918":null,"SJAG_00930":null,"SJAG_01196":null,"SJAG_01215":null,"SJAG_01224":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_01775":null,"SJAG_01837":null,"SJAG_01993":null,"SJAG_02040":null,"SJAG_02045":null,"SJAG_02286":null,"SJAG_02336":null,"SJAG_02396":null,"SJAG_02431":null,"SJAG_02509":null,"SJAG_02566":null,"SJAG_02624":null,"SJAG_02651":null,"SJAG_02695":null,"SJAG_02761":null,"SJAG_03052":null,"SJAG_03073":null,"SJAG_03088":null,"SJAG_03145":null,"SJAG_03264":null,"SJAG_03540":null,"SJAG_03703":null,"SJAG_04003":null,"SJAG_04387":null,"SJAG_04745":null,"SJAG_04841":null,"SJAG_04887":null,"SJAG_05024":null,"SJAG_05220":null,"SJAG_05266":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"supramolecular fiber","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null,"PMID:21802294":null,"PMID:30726171":null},"secondary_identifiers":["GO:0043205"],"synonyms":[{"name":"fibril","type":"related"}],"termid":"GO:0099512","terms_by_termid":{"GO:0000235":null,"GO:0005827":null,"GO:0005874":null,"GO:0005876":null,"GO:0005880":null,"GO:0005881":null,"GO:0005884":null,"GO:0032982":null,"GO:0035371":null,"GO:0036449":null,"GO:0055028":null,"GO:0055120":null,"GO:0061673":null,"GO:0062194":null,"GO:0097268":null,"GO:1903754":null,"GO:1904511":null,"GO:1905721":null,"GO:1905759":null,"GO:1905760":null,"GO:1990498":null,"GO:1990537":null,"GO:1990574":null,"GO:1990941":null}}


id: PR:000037030
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the rho3 gene in Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein rho3 (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC23C4.08","synonyms":[{"name":"Spom-rho3","type":"exact"}],"termid":"PR:000037030"}


id: GO:0035367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of thymine, 5-methyluracil, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:sl","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nucleobase-containing compound transport","termid":"GO:0032241"},{"relation_name":"is_a","term_name":"regulation of thymine transport","termid":"GO:0035365"},{"relation_name":"positively_regulates","term_name":"thymine transport","termid":"GO:0035364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of thymine transport","synonyms":[{"name":"positive regulation of 5-methyluracil transport","type":"exact"}],"termid":"GO:0035367"}


id: FYPO:0009095
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is increased relative to normal in a medium containing fructose as the carbon source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0002058","FYPO:0000139","FYPO:0005447","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"increased cell population growth on fructose carbon source","synonyms":[{"name":"increased growth on fructose carbon source","type":"broad"},{"name":"increased vegetative cell growth on fructose carbon source","type":"exact"}],"termid":"FYPO:0009095"}


id: PBO:0017459
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-hyperparasite_of","termid":"PBO:0017459"}


id: GO:0001791
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an immunoglobulin of the IgM isotype.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin binding","termid":"GO:0019865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"IgM binding","termid":"GO:0001791"}


id: PBO:0059810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 36","termid":"PBO:0059810"}


id: PBO:0005837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ATPase inhibitor (predicted)","termid":"PBO:0005837"}


id: PBO:0050871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isocitrate dehydrogenase (NADP(+)) 2","termid":"PBO:0050871"}


id: GO:0140393
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (1'S)-averantin + NADP+ = norsolorinic acid + NADPH.","definition_xrefs":["PMID:10584035","RHEA:35447","PMID:8368836"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketoreductase activity","termid":"GO:0045703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"norsolorinic acid ketoreductase activity","secondary_identifiers":["EC:1.1.1.349","KEGG_REACTION:R10309","MetaCyc:RXN-9480"],"termid":"GO:0140393"}


id: MONDO:0000156
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"trigonocephaly","secondary_identifiers":["SCTID:28740008","MEDGEN:82713","icd11.foundation:20816218","UMLS:C0265535"],"synonyms":[{"name":"trigonocephalia","type":"related"},{"name":"trigonocephalus","type":"related"},{"name":"trigonocephaly","type":"exact"},{"name":"trigonocephaly, isolated","type":"related"}],"termid":"MONDO:0000156","xrefs":{"Monarch":{"xref_id":"0000156"}}}


id: MONDO:0010882
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aphalangy-syndactyly-microcephaly is an extremely rare malformation syndrome characterized by the association of partial distal aphalangia with syndactyly, duplication of metatarsal IV, microcephaly, and mild intellectual disability.","definition_xrefs":["Orphanet:1113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"aphalangy-syndactyly-microcephaly syndrome","secondary_identifiers":["OMIM:600384","MESH:C563942","UMLS:C1838161","MEDGEN:324958","GARD:748"],"synonyms":[{"name":"APHALANGIA, partial, with syndactyly and DUPLICATION of metatarsal IV","type":"related"},{"name":"Aphalangia partial with syndactyly and duplication of metatarsal IV","type":"related"},{"name":"Aphalangia, partial, with syndactyly and Duplication of metatarsal 4","type":"related"},{"name":"Aphalangia, partial, with syndactyly and Duplication of metatarsal type 4","type":"exact"}],"termid":"MONDO:0010882","xrefs":{"Monarch":{"xref_id":"0010882"}}}


id: GO:0100027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that regulates cell separation after cytokinesis.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cell separation after cytokinesis by transcription from RNA polymerase II promoter (obsolete GO:0100027)","termid":"GO:0100027"}


id: PR:Q9UTQ0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1093.04c gene.","definition_xrefs":["UniProtKB:Q9UTQ0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCA tRNA nucleotidyltransferase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1093.04c","synonyms":[{"name":"CCA-adding enzyme 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC1093.04c","type":"exact"},{"name":"tRNA CCA-pyrophosphorylase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA adenylyltransferase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA nucleotidyltransferase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTQ0"}


id: MOD:00785
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to N2-acetyl-L-tryptophan.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"},{"relation_name":"is_a","term_name":"alpha-amino acetylated residue","termid":"MOD:01458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00408"}],"interesting_parent_ids":["MOD:00408"],"is_obsolete":false,"name":"N2-acetyl-L-tryptophan","synonyms":[{"name":"AcTrp","type":"exact"}],"termid":"MOD:00785"}


id: GO:0045974
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process, mediated by small non-coding RNAs, that modulates the frequency, rate or extent that mRNAs are effectively translated into protein.","definition_xrefs":["GOC:go_curators","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translation","termid":"GO:0006417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of translation, ncRNA-mediated","termid":"GO:0045974"}


id: PBO:0049059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 65","termid":"PBO:0049059"}


id: PBO:0028167
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_crossover_junction_endodeoxyribonuclease_activity","termid":"PBO:0028167"}


id: GO:0070334
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha6-beta4 integrin complex bound to laminin 5.","definition_xrefs":["GOC:mah","PMID:7556090"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"alpha6-beta4 integrin-laminin 5 complex","synonyms":[{"name":"ITGA6-ITGB4-LAMA5 complex","type":"narrow"},{"name":"alpha6-beta4 integrin-laminin-332 complex","type":"exact"}],"termid":"GO:0070334"}


id: GO:0007245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Upregulation of MAPKKK activity in the context of transduction of mating pheromone signal, as described for Saccharomyces.","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPKKK (mating sensu Saccharomyces) (obsolete GO:0007245)","synonyms":[{"name":"activation of MAPKKK (mating sensu Saccharomyces)","type":"exact"}],"termid":"GO:0007245"}


id: PBO:0063334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proliferating cell nuclear antigen","termid":"PBO:0063334"}


id: PBO:0044576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diazepam binding inhibitor, acyl-CoA binding protein","termid":"PBO:0044576"}


id: MONDO:0043191
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"isolated Pierre-Robin syndrome","termid":"MONDO:0009869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"radial defect robin sequence","secondary_identifiers":["GARD:4624","MEDGEN:419346","UMLS:C2931143","MESH:C536261"],"synonyms":[{"name":"Bruce Winship syndrome","type":"related"},{"name":"Bruce winship syndrome","type":"related"},{"name":"bilateral radial defects club foot deformity micrognathia and cleft palate","type":"related"},{"name":"bilateral radial defects, club foot deformity, micrognathia and cleft palate","type":"related"}],"termid":"MONDO:0043191","xrefs":{"Monarch":{"xref_id":"0043191"}}}


id: MONDO:0002466
data:
  {"annotated_genes":["SJAG_03677"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88982],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014937"}]},"cv_name":"mondo","definition":"A carcinoma that arises from epithelial cells of the eye","direct_ancestors":[{"relation_name":"is_a","term_name":"head and neck carcinoma","termid":"MONDO:0002038"},{"relation_name":"is_a","term_name":"ocular cancer","termid":"MONDO:0002236"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03677":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005328"],"is_obsolete":false,"name":"eye carcinoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:208855","UMLS:C0848866","NCIT:C6079","DOID:295"],"synonyms":[{"name":"carcinoma of eye","type":"exact"},{"name":"carcinoma of eyeball of camera-type eye","type":"exact"},{"name":"carcinoma of the eye","type":"exact"},{"name":"eye carcinoma","type":"exact"},{"name":"eyeball of camera-type eye carcinoma","type":"exact"},{"name":"ocular carcinoma","type":"exact"}],"termid":"MONDO:0002466","terms_by_termid":{"MONDO:0014937":null},"xrefs":{"Monarch":{"xref_id":"0002466"}}}


id: GO:0097544
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The mid part of a cilium between the ciliary base and ciliary tip that extends into the extracellular space.","definition_xrefs":["GOC:cilia","PMID:19866682","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cilium","termid":"GO:0005929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ciliary shaft","synonyms":[{"name":"cilial shaft","type":"exact"},{"name":"cilium shaft","type":"exact"},{"name":"flagellar shaft","type":"exact"},{"name":"flagellum shaft","type":"exact"}],"termid":"GO:0097544"}


id: GO:0102263
data:
  {"annotated_genes":["SJAG_00174"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111481],"is_not":false,"summary":null,"term":"GO:0102263"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 5,6-dihydrouracil17 in tRNA + NAD(P) = H+ + a uracil17 in tRNA + NAD(P)H.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA dihydrouridine synthase activity","termid":"GO:0017150"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00174":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0140101","GO:0140098","GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"tRNA-dihydrouridine17 synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-12455"],"termid":"GO:0102263","terms_by_termid":{"GO:0102263":null}}


id: MONDO:0018915
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pneumococcal meningitis (obsolete MONDO:0018915)","termid":"MONDO:0018915","xrefs":{"Monarch":{"xref_id":"0018915"}}}


id: MONDO:0000059
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete methylmalonic aciduria and homocystinuria (obsolete MONDO:0000059)","termid":"MONDO:0000059","xrefs":{"Monarch":{"xref_id":"0000059"}}}


id: PBO:0061178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear-encoded mitochondrial tRNA-Gln (TTG) 8-1","termid":"PBO:0061178"}


id: GO:0097264
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their own peptide bonds.","definition_xrefs":["GOC:yaf","PMID:19144634","PMID:18676612"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteolysis","termid":"GO:0006508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"self proteolysis","synonyms":[{"name":"autolysis","type":"broad"},{"name":"self-proteolysis","type":"exact"}],"termid":"GO:0097264"}


id: PBO:0031691
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_oxidative_phosphorylation","termid":"PBO:0031691"}


id: GO:0030921
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The oxidation of the C alpha-C beta bond of peptidyl-tyrosine to form peptidyl-(Z)-2,3-didehydrotyrosine coupled with cyclization of neighboring residues.","definition_xrefs":["PMID:9631087","RESID:AA0183"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-tyrosine dehydrogenation to form (Z)-2,3-didehydrotyrosine (obsolete GO:0030921)","termid":"GO:0030921"}


id: MONDO:0032891
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"intracranial berry aneurysm","termid":"MONDO:0016483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aneurysm, intracranial berry, 12","secondary_identifiers":["MEDGEN:1684660","OMIM:618734","GARD:18330","DOID:0080975","UMLS:C5231484"],"synonyms":[{"name":"ANEURYSM, INTRACRANIAL BERRY, 12","type":"related"},{"name":"ANIB12","type":"related"}],"termid":"MONDO:0032891","xrefs":{"Monarch":{"xref_id":"0032891"}}}


id: MONDO:0011634
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign myopathy with symptoms and signs of muscular hyperexcitability. The typical finding is electrically silent muscle contractions provoked by mechanical stimuli and stretch","definition_xrefs":["doi:10.1002/mus.10156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myopathy","termid":"MONDO:0005336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"rippling muscle disease","secondary_identifiers":["MEDGEN:342944","SCTID:709281006","UMLS:C1853698","ICD9:359.29","icd11.foundation:894802822","MedDRA:10069417"],"termid":"MONDO:0011634","xrefs":{"Monarch":{"xref_id":"0011634"}}}


id: PR:P22774
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A stress-70 protein, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00704","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock 70 kDa protein, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC664.11","secondary_identifiers":["UniProtKB:P22774"],"synonyms":[{"name":"Spom972h-HSPA9","type":"exact"}],"termid":"PR:P22774"}


id: GO:0070705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of an RNA molecule by insertion of one or more nucleotides.","definition_xrefs":["GOC:cb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA modification","termid":"GO:0009451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"RNA nucleotide insertion","termid":"GO:0070705"}


id: MONDO:0025376
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An insect-borne reovirus infection of horses, mules and donkeys in Africa and the Middle East; characterized by pulmonary edema, cardiac involvement, and edema of the head and neck.","definition_xrefs":["MESH:D000355"],"direct_ancestors":[{"relation_name":"is_a","term_name":"horse disease","termid":"MONDO:0024950"},{"relation_name":"is_a","term_name":"Reoviridae infectious disease, non-human animal","termid":"MONDO:0700095"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"African horse sickness","synonyms":[{"name":"African Horsesickness","type":"related"},{"name":"African Horsesicknesses","type":"related"},{"name":"African horse Sicknesses","type":"related"},{"name":"Horsesickness, African","type":"related"},{"name":"Horsesicknesses, African","type":"related"},{"name":"Plagues, equine","type":"related"},{"name":"Sicknesses, African horse","type":"related"},{"name":"equine Plagues","type":"related"},{"name":"equine plague","type":"related"},{"name":"horse Sicknesses, African","type":"related"},{"name":"horse sickness, African","type":"related"},{"name":"plague, equine","type":"related"},{"name":"sickness, African horse","type":"related"}],"termid":"MONDO:0025376","xrefs":{"Monarch":{"xref_id":"0025376"}}}


id: PBO:0048040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSIP2 antisense RNA 1","termid":"PBO:0048040"}


id: GO:0097207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A dormancy process in which dormancy (sometimes called a dormant state) is induced, maintained or broken in a bud. Bud dormancy is a suspension of most physiological activity and growth that can be reactivated. It may be a response to environmental conditions such as seasonality or extreme heat, drought, or cold. The exit from bud dormancy is marked by the resumed growth of the bud.","definition_xrefs":["PO_REF:00009","GOC:PO_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dormancy process","termid":"GO:0022611"},{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bud dormancy process","synonyms":[{"name":"bud dormancy","type":"related"}],"termid":"GO:0097207"}


id: PBO:0084242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Initiator methionine 2'-O-ribosyl phosphate transferase; modifies the initiator methionine tRNA at position 64 to distinguish it from elongator methionine tRNA","termid":"PBO:0084242"}


id: MONDO:0850102
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"non-specific autoimmune supratentorial encephalitis with characteristic antibodies","secondary_identifiers":["UMLS:C5680408","GARD:22497","MEDGEN:1842219","Orphanet:624166"],"termid":"MONDO:0850102","xrefs":{"Monarch":{"xref_id":"0850102"}}}


id: PBO:0066193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBM12B divergent transcript","termid":"PBO:0066193"}


id: MOD:01160
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results in the loss of an ammonia, usually by a process of vicinal dehydration, rearrangement, and rehydration with release of ammonia, resulting in a loss of nitrogen with no gain of oxygen.","definition_xrefs":["Unimod:385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deaminated residue","synonyms":[{"name":"Ammonia-loss","type":"related"},{"name":"Loss of ammonia","type":"related"}],"termid":"MOD:01160"}


id: PATO:0001012
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001012 relative intensity value (obsolete PATO:0001012)","termid":"PATO:0001012"}


id: MONDO:0003138
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A term that refers to glomerular damage resulting in hematuria, proteinuria, and azotemia. The histopathologic changes include rapidly progressive glomerulonephritis and membranoproliferative glomerulonephritis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerulonephritis","termid":"MONDO:0002462"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"subacute glomerulonephritis","secondary_identifiers":["SCTID:123609007","MEDGEN:266070","UMLS:C1263744","DOID:4782","NCIT:C35801"],"termid":"MONDO:0003138","xrefs":{"Monarch":{"xref_id":"0003138"}}}


id: GO:0043700
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A tissue-specific, membrane-bounded cytoplasmic organelle within which pteridine pigments are synthesized and stored. Pterinosomes are synthesized in xanthophores and erythrophore cells and are yellow, orange or red in appearance.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment granule","termid":"GO:0048770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"pterinosome","termid":"GO:0043700"}


id: GO:0014713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of branchiomeric skeletal muscle development. Branchiomeric skeletal muscle development is the process whose specific outcome is the progression of the branchiomeric skeletal muscle over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of branchiomeric skeletal muscle development","termid":"GO:0014711"},{"relation_name":"is_a","term_name":"negative regulation of skeletal muscle tissue development","termid":"GO:0048642"},{"relation_name":"negatively_regulates","term_name":"branchiomeric skeletal muscle development","termid":"GO:0014707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of branchiomeric skeletal muscle development","termid":"GO:0014713"}


id: MONDO:0010066
data:
  {"annotated_genes":["SJAG_02184","SJAG_02803","SJAG_02479"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88166,88167,88168],"is_not":false,"summary":null,"term":"MONDO:0010066"}]},"cv_name":"mondo","definition":"Familial isolated congenital asplenia is a rare, non-syndromic, potentially life-threatening visceral malformation characterized by the absence of normal spleen function, resulting in a primary immunodeficiency. Typically, the condition manifests with severe, recurrent, overwhelming infections (especially pneumococcal sepsis) in otherwise apparently healthy infants. In adults with no history of severe sepsis in infancy, thrombocytosis may be the presenting sign. Howell-Jolly bodies on blood smears and an absent spleen on abdominal ultrasound examination are highly suggestive associated findings.","definition_xrefs":["Orphanet:101351"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn error of immunity","termid":"MONDO:0003778"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02184":null,"SJAG_02479":null,"SJAG_02803":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"familial isolated congenital asplenia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:2200775","UMLS:C0685889","MEDGEN:151935","GARD:16944","OMIM:271400","SCTID:726708009","MESH:C563028"],"synonyms":[{"name":"ICAS","type":"related"},{"name":"asplenia, familial","type":"related"},{"name":"asplenia, isolated congenital","type":"related"},{"name":"hyposplenia, isolated congenital","type":"related"},{"name":"splenic hypoplasia","type":"related"}],"termid":"MONDO:0010066","terms_by_termid":{"MONDO:0010066":null},"xrefs":{"Monarch":{"xref_id":"0010066"}}}


id: GO:1903967
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a micafungin stimulus.","definition_xrefs":["PMID:16928959","GOC:TermGenie","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to micafungin","termid":"GO:1903967"}


id: PBO:0084706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial inner membrane ADP/ATP translocator; exchanges cytosolic ADP for mitochondrially synthesized ATP; expressed under anaerobic conditions; similar to Aac1p; has roles in maintenance of viability and in respiration; AAC3 has a paralog, PET9, that arose from the whole genome duplication","termid":"PBO:0084706"}


id: GO:1903585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of histone deubiquitination.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24526689"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone deubiquitination (obsolete GO:1903585)","synonyms":[{"name":"down regulation of histone deubiquitination","type":"exact"},{"name":"down regulation of histone deubiquitinylation","type":"exact"},{"name":"down regulation of histone deubiquitylation","type":"exact"},{"name":"down-regulation of histone deubiquitination","type":"exact"},{"name":"down-regulation of histone deubiquitinylation","type":"exact"},{"name":"down-regulation of histone deubiquitylation","type":"exact"},{"name":"downregulation of histone deubiquitination","type":"exact"},{"name":"downregulation of histone deubiquitinylation","type":"exact"},{"name":"downregulation of histone deubiquitylation","type":"exact"},{"name":"inhibition of histone deubiquitination","type":"narrow"},{"name":"inhibition of histone deubiquitinylation","type":"narrow"},{"name":"inhibition of histone deubiquitylation","type":"narrow"},{"name":"negative regulation of histone deubiquitinylation","type":"exact"},{"name":"negative regulation of histone deubiquitylation","type":"exact"}],"termid":"GO:1903585"}


id: GO:0009339
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex that catalyzes the oxidation of 2-hydroxy acid to form 2-oxo acid and hydrogen peroxide (H2O2). The enzyme is a flavoprotein (FMN).","definition_xrefs":["PMID:8606183","PMID:4557653"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"glycolate oxidase complex","termid":"GO:0009339"}


id: PBO:0002453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX domain protein Ubx2","termid":"PBO:0002453"}


id: FYPO:0004793
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the distance between one or more telomeres and the nuclear envelope is smaller than normal during mitosis.","definition_xrefs":["PMID:22959349","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal telomere-nuclear envelope distance during vegetative growth","termid":"FYPO:0004790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased telomere-nuclear envelope distance during mitotic M phase","synonyms":[{"name":"decreased distance between telomeres and nuclear envelope during mitosis","type":"exact"},{"name":"decreased telomere-nuclear envelope distance during M phase during mitotic cell cycle","type":"related"},{"name":"decreased telomere-nuclear envelope distance during mitosis during vegetative growth","type":"exact"},{"name":"decreased telomere-nuclear envelope distance during mitotic M phase","type":"related"},{"name":"reduced telomere-nuclear envelope distance during mitosis","type":"exact"}],"termid":"FYPO:0004793"}


id: GO:0090130
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the population of cells that make up a tissue undergo directed movement.","definition_xrefs":["GOC:ascb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tissue migration","termid":"GO:0090130"}


id: MONDO:0017192
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"sporadic pheochromocytoma/secreting paraganglioma","termid":"MONDO:0017190"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sporadic secreting paraganglioma","secondary_identifiers":["Orphanet:276627"],"termid":"MONDO:0017192","xrefs":{"Monarch":{"xref_id":"0017192"}}}


id: PBO:0091308
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human RAB6A","termid":"PBO:0091308"}


id: PBO:0081304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 85","termid":"PBO:0081304"}


id: MONDO:0002733
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0002733 (obsolete MONDO:0002733)","termid":"MONDO:0002733","xrefs":{"Monarch":{"xref_id":"0002733"}}}


id: GO:0019176
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dihydroneopterin monophosphate = dihydroneopterin + phosphate.","definition_xrefs":["MetaCyc:DIHYDRONEOPTERIN-MONO-P-DEPHOS-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides","termid":"GO:0016818"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"dihydroneopterin monophosphate phosphatase activity","secondary_identifiers":["RHEA:25306"],"synonyms":[{"name":"dihydroneopterin monophosphate dephosphorylase activity","type":"exact"}],"termid":"GO:0019176"}


id: GO:0018472
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-hydroxy-2-naphthaldehyde + NAD+ + H2O = NADH + H+ + 1-hydroxy-2-naphthoate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-hydroxy-2-naphthaldehyde dehydrogenase activity (obsolete GO:0018472)","termid":"GO:0018472"}


id: PBO:0028394
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_cell_during_cellular_response_to_osmotic_stress","termid":"PBO:0028394"}


id: GO:1905480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of glutamate-ammonia ligase activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:10377385"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of glutamate-ammonia ligase activity (obsolete GO:1905480)","synonyms":[{"name":"activation of L-glutamate:ammonia ligase (ADP-forming)","type":"narrow"},{"name":"activation of L-glutamine synthetase activity","type":"narrow"},{"name":"activation of glutamate-ammonia ligase activity","type":"narrow"},{"name":"activation of glutamine synthetase activity","type":"narrow"},{"name":"activation of glutamylhydroxamic synthetase activity","type":"narrow"},{"name":"positive regulation of L-glutamate:ammonia ligase (ADP-forming)","type":"exact"},{"name":"positive regulation of L-glutamine synthetase activity","type":"exact"},{"name":"positive regulation of glutamine synthetase activity","type":"exact"},{"name":"positive regulation of glutamylhydroxamic synthetase activity","type":"exact"},{"name":"up regulation of L-glutamate:ammonia ligase (ADP-forming)","type":"exact"},{"name":"up regulation of L-glutamine synthetase activity","type":"exact"},{"name":"up regulation of glutamate-ammonia ligase activity","type":"exact"},{"name":"up regulation of glutamine synthetase activity","type":"exact"},{"name":"up regulation of glutamylhydroxamic synthetase activity","type":"exact"},{"name":"up-regulation of L-glutamate:ammonia ligase (ADP-forming)","type":"exact"},{"name":"up-regulation of L-glutamine synthetase activity","type":"exact"},{"name":"up-regulation of glutamate-ammonia ligase activity","type":"exact"},{"name":"up-regulation of glutamine synthetase activity","type":"exact"},{"name":"up-regulation of glutamylhydroxamic synthetase activity","type":"exact"},{"name":"upregulation of L-glutamate:ammonia ligase (ADP-forming)","type":"exact"},{"name":"upregulation of L-glutamine synthetase activity","type":"exact"},{"name":"upregulation of glutamate-ammonia ligase activity","type":"exact"},{"name":"upregulation of glutamine synthetase activity","type":"exact"},{"name":"upregulation of glutamylhydroxamic synthetase activity","type":"exact"}],"termid":"GO:1905480"}


id: GO:0071859
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a neuropeptide F receptor.","definition_xrefs":["GOC:mah","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor binding","termid":"GO:0071855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"neuropeptide F receptor binding","termid":"GO:0071859"}


id: PBO:0056563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minichromosome maintenance 10 replication initiation factor","termid":"PBO:0056563"}


id: MONDO:0017909
data:
  {"annotated_genes":["SJAG_01351"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87564],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009947"},{"annotations":[88000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009284"}]},"cv_name":"mondo","definition":"Glutathione synthetase deficiency is characterized by hemolytic anemia, associated with metabolic acidosis and 5-oxoprolinuria in moderate forms, and with progressive neurological symptoms and recurrent bacterial infections in the most severe forms.","definition_xrefs":["Orphanet:32"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defective phagocytic cell engulfment","termid":"MONDO:0024626"},{"relation_name":"is_a","term_name":"inherited glutathione metabolism disease","termid":"MONDO:0040566"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01351":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019241"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0019241","MONDO:0005046"],"is_obsolete":false,"name":"inherited glutathione synthetase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C536835","DOID:0080699","NCIT:C128193","SCTID:234589002","GARD:10047"],"synonyms":[{"name":"5-oxoprolinuria","type":"exact"},{"name":"GSSD","type":"exact"},{"name":"glutathione synthetase deficiency","type":"exact"},{"name":"inborn error of glutathione synthase activity","type":"exact"},{"name":"inborn glutathione synthase activity disorder","type":"exact"},{"name":"inherited glutathione synthetase deficiency","type":"exact"},{"name":"oxoprolinase deficiency","type":"related"},{"name":"pyroglutamic aciduria","type":"exact"},{"name":"pyroglutamicaciduria","type":"exact"},{"name":"rare inborn error of glutathione synthase activity","type":"exact"}],"termid":"MONDO:0017909","terms_by_termid":{"MONDO:0009284":null,"MONDO:0009947":null},"xrefs":{"Monarch":{"xref_id":"0017909"}}}


id: MONDO:1011810
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cancer or benign tumor, non-human animal","termid":"MONDO:1011305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"megakaryoblastic leukemia, non-human animal","secondary_identifiers":["OMIA:000630"],"termid":"MONDO:1011810","xrefs":{"Monarch":{"xref_id":"1011810"}}}


id: FYPO:0000350
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the actin cytoskeleton is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytoskeleton morphology during vegetative growth","termid":"FYPO:0000352"},{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton during vegetative growth","termid":"FYPO:0002398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0004803","FYPO:0001985"],"is_obsolete":false,"name":"abnormal actin cytoskeleton morphology during vegetative growth","synonyms":[{"name":"abnormal actin cytoskeleton morphology during mitotic cell cycle","type":"related"},{"name":"actin cytoskeleton morphology: abnormal","type":"related"}],"termid":"FYPO:0000350"}


id: POMBASE_GENE_EX_REL_INTERNAL:modified_residue
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"For internal PomBase use: modified residue position","definition_xrefs":["PomBase:kmr"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_residue","termid":"POMBASE_GENE_EX_REL_INTERNAL:modified_residue"}


id: GO:0080030
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + methyl (indol-3-yl)acetate = (indol-3-yl)acetate + H+ + methanol.","definition_xrefs":["RHEA:32919","PMID:18467465"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"methyl indole-3-acetate esterase activity","secondary_identifiers":["MetaCyc:RXN-10711"],"synonyms":[{"name":"MeIAA esterase activity","type":"exact"},{"name":"Methyl IAA esterase activity","type":"exact"},{"name":"indole-3-Acetic acid methyl ester esterase activity","type":"exact"}],"termid":"GO:0080030"}


id: PBO:0042841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 45","termid":"PBO:0042841"}


id: PBO:0046651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESAM antisense RNA 1","termid":"PBO:0046651"}


id: FYECO:0000156
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which rhodamine-phalloidin was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000156 rhodamine-phalloidin added (obsolete FYECO:0000156)","synonyms":[{"name":"rhodamine phalloidin","type":"exact"}],"termid":"FYECO:0000156"}


id: GO:0014703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within oscillatory skeletal muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Oscillatory muscle contraction occurs in insect wing muscles and is characterized by asynchrony between action potential and contraction and by stretch activation.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voluntary skeletal muscle contraction","termid":"GO:0003010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oscillatory muscle contraction","termid":"GO:0014703"}


id: MONDO:0010816
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Qazi-Markouizos syndrome is characterized principally by non-progressive central hypotonia, chronic constipation, severe psychomotor retardation, abnormal dermatoglyphics, dysharmonic skeletal maturation and disproportionate muscle fibers. Seizures or an abnormal electroencephalograph were also reported. To date, the syndrome has been reported in three unrelated Puerto Rican boys.","definition_xrefs":["Orphanet:3010"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Qazi Markouizos syndrome","secondary_identifiers":["DOID:0050740","GARD:371","MESH:C536259","MEDGEN:443987","OMIM:600096","SCTID:721887007","UMLS:C2931142"],"synonyms":[{"name":"Dysharmonic skeletal maturation - muscular fiber disproportion","type":"exact"},{"name":"Dysharmonic skeletal maturation - muscular fibre disproportion","type":"exact"},{"name":"Dysharmonic skeletal maturation muscular fiber disproportion","type":"related"},{"name":"Dysharmonic skeletal maturation muscular fibre disproportion","type":"related"},{"name":"Dysharmonic skeletal maturation-muscular fiber disproportion syndrome","type":"exact"},{"name":"Dysharmonic skeletal maturation-muscular fibre disproportion syndrome","type":"exact"},{"name":"PUERTO RICAN infant hypotonia syndrome","type":"related"},{"name":"Puertorican infant hypotonia syndrome","type":"related"},{"name":"Qazi-Markouizos syndrome","type":"exact"},{"name":"hypotonia, psychomotor retardation, seizures, delayed and Dysharmonic skeletal maturation, and congenital fiber type disproportion","type":"related"},{"name":"hypotonia, psychomotor retardation, seizures, delayed and Dysharmonic skeletal maturation, and congenital fibre type disproportion","type":"related"}],"termid":"MONDO:0010816","xrefs":{"Monarch":{"xref_id":"0010816"}}}


id: PBO:0080403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS35 retromer complex component","termid":"PBO:0080403"}


id: PBO:0060232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myeloid associated differentiation marker like 2","termid":"PBO:0060232"}


id: GO:0160155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The autophagic process which involves the direct fusion of abnormal, excess or obsolete secretory granules with lysosomes. This pathway is often associated with maintaining homeostasis in endocrine and exocrine cells.","definition_xrefs":["PMID:35452619","PMID:29066608"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autophagy","termid":"GO:0006914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006914","GO:0008150"],"is_obsolete":false,"name":"crinophagy","termid":"GO:0160155"}


id: MONDO:0036918
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"epidermal disease","termid":"MONDO:0019268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"punctate acrokeratoderma freckle-like pigmentation","secondary_identifiers":["GARD:4603","UMLS:C5681635","MEDGEN:1814481","Orphanet:99710"],"termid":"MONDO:0036918","xrefs":{"Monarch":{"xref_id":"0036918"}}}


id: PBO:0089977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase PP1 catalytic subunit Dis2","termid":"PBO:0089977"}


id: PBO:0111645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone chaperone/ATP-dependent chromatin remodeller, SMARCAD1 family Fft3","termid":"PBO:0111645"}


id: PBO:0057934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3660","termid":"PBO:0057934"}


id: MONDO:0700093
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Robertsonian translocation Down syndrome in which translocation displacement of the end regions of chromosomes occurred without loss of chromosomal material between the two nonhomologous chromosomes.","direct_ancestors":[{"relation_name":"is_a","term_name":"Robertsonian translocation Down syndrome","termid":"MONDO:0700082"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"balanced Robertsonian translocation Down syndrome","termid":"MONDO:0700093","xrefs":{"Monarch":{"xref_id":"0700093"}}}


id: PBO:0017029
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by human MARK3","termid":"PBO:0017029"}


id: MONDO:0009081
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypopigmentation of the skin","termid":"MONDO:0019290"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"deafness, congenital, with total albinism","secondary_identifiers":["MESH:C565646","UMLS:C1857343","MEDGEN:387799","OMIM:220900"],"synonyms":[{"name":"deafness, congenital, with total albinism","type":"exact"}],"termid":"MONDO:0009081","xrefs":{"Monarch":{"xref_id":"0009081"}}}


id: GO:0070958
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the directed killing of a gram-positive bacterium by a neutrophil.","definition_xrefs":["GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neutrophil mediated killing of gram-positive bacterium","termid":"GO:0070952"},{"relation_name":"is_a","term_name":"negative regulation of neutrophil mediated killing of bacterium","termid":"GO:0070956"},{"relation_name":"negatively_regulates","term_name":"neutrophil-mediated killing of gram-positive bacterium","termid":"GO:0070946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neutrophil mediated killing of gram-positive bacterium","synonyms":[{"name":"down regulation of neutrophil mediated killing of gram-positive bacterium","type":"exact"},{"name":"down-regulation of neutrophil mediated killing of gram-positive bacterium","type":"exact"},{"name":"downregulation of neutrophil mediated killing of gram-positive bacterium","type":"exact"},{"name":"inhibition of neutrophil mediated killing of gram-positive bacterium","type":"narrow"}],"termid":"GO:0070958"}


id: MONDO:0040998
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pasteurellosis","termid":"MONDO:0005901"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pasteurella multocida infectious disease","secondary_identifiers":["SCTID:197718007","MEDGEN:226779","UMLS:C1260911"],"synonyms":[{"name":"infection by Pasteurella multocida","type":"exact"},{"name":"infection caused by Pasteurella multocida","type":"related"}],"termid":"MONDO:0040998","xrefs":{"Monarch":{"xref_id":"0040998"}}}


id: PBO:0089130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle receptor alpha subunit Srp101","termid":"PBO:0089130"}


id: MONDO:0009468
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Idiopathic intracranial hypertension is a neurological disorder characterized by isolated increased intracranial pressure manifesting with recurrent and persistent headaches, nausea, vomiting, progressive and transient obstruction of the visual field, papilledema. Visual loss can be irreversible.","definition_xrefs":["Orphanet:238624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracranial hypertension","termid":"MONDO:0006810"},{"relation_name":"is_a","term_name":"cerebrovascular disorder","termid":"MONDO:0011057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudotumor cerebri","secondary_identifiers":["GARD:4561","ICD9:348.2","NCIT:C85035","UMLS:C0033845","MESH:D011559","OMIM:243200","MedDRA:10037149","MEDGEN:18732","ICD10CM:G93.2","NORD:1294","SCTID:68267002","DOID:11459","EFO:1001132"],"synonyms":[{"name":"IIH","type":"exact"},{"name":"Idiopathic Intracranial Hypertension","type":"exact"},{"name":"benign intracran. hypt.","type":"exact"},{"name":"benign intracranial hypertension","type":"exact"},{"name":"idiopathic intracranial hypertension","type":"exact"},{"name":"intracranial hypertension, idiopathic","type":"related"},{"name":"pseudotumor cerebri","type":"exact"}],"termid":"MONDO:0009468","xrefs":{"Monarch":{"xref_id":"0009468"}}}


id: PBO:0087301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Site-specific endonuclease; required for gene conversion at the MAT locus (homothallic switching) through the generation of a ds DNA break; expression restricted to mother cells in late G1 as controlled by Swi4p-Swi6p, Swi5p, and Ash1p","termid":"PBO:0087301"}


id: PBO:0043227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride channel CLIC like 1","termid":"PBO:0043227"}


id: PR:P87216
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vip1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87216"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein vip1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC10F6.06","synonyms":[{"name":"Spom972h-vip1","type":"exact"}],"termid":"PR:P87216"}


id: PBO:0004971
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactokinase deficiency with cataracts","termid":"PBO:0004971"}


id: GO:0051704
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A biological process which involves another organism of the same or different species.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism process (obsolete GO:0051704)","synonyms":[{"name":"interaction between organisms","type":"exact"},{"name":"physiological interaction between organisms","type":"exact"},{"name":"physiological interaction with other organism","type":"exact"}],"termid":"GO:0051704"}


id: GO:0075029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The development of a swollen tip at the growing end of a symbiont spore which usually flattens against the host cell surface prior to appressorium formation.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of infection structure","termid":"GO:0075015"},{"relation_name":"part_of","term_name":"initiation of appressorium formation","termid":"GO:0075025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formation of appressorium germ tube hook structure","synonyms":[{"name":"formation of germ tube tip of symbiont on or near the exterior of host","type":"exact"},{"name":"formation of symbiont germ tube hook structure for appressorium development","type":"exact"},{"name":"formation of symbiont germ tube hook structure on or near host","type":"related"},{"name":"symbiont germ tube hook structure formation on or near host","type":"exact"}],"termid":"GO:0075029"}


id: PBO:0073134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC14 like lipid binding 6","termid":"PBO:0073134"}


id: MONDO:0017384
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A widespread acute rash characterized by fever and multiple small pustules on a reddish background.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatitis","termid":"MONDO:0002406"},{"relation_name":"is_a","term_name":"severe cutaneous adverse reaction","termid":"MONDO:0005594"},{"relation_name":"is_a","term_name":"toxic dermatosis","termid":"MONDO:0017396"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"acute generalized exanthematous pustulosis","secondary_identifiers":["NCIT:C112122","UMLS:C0877055","MEDGEN:209091","Orphanet:293173","GARD:21164","SCTID:702617007","ICD9:709.8","MedDRA:10048799","MESH:D056150"],"synonyms":[{"name":"AGEP","type":"exact"},{"name":"pustular drug eruption","type":"exact"},{"name":"toxic pustuloderma","type":"exact"}],"termid":"MONDO:0017384","xrefs":{"Monarch":{"xref_id":"0017384"}}}


id: MONDO:0018004
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acute megakaryoblastic leukemia","termid":"MONDO:0018872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"acute megakaryoblastic leukemia without down syndrome","secondary_identifiers":["UMLS:C5679860","MEDGEN:1843134","Orphanet:329469","GARD:21490"],"synonyms":[{"name":"non-DS-AMKL","type":"exact"}],"termid":"MONDO:0018004","xrefs":{"Monarch":{"xref_id":"0018004"}}}


id: GO:1901177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lycopene.","definition_xrefs":["UniPathway:UPA00803","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotene biosynthetic process","termid":"GO:0016120"},{"relation_name":"is_a","term_name":"lycopene metabolic process","termid":"GO:1901175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"lycopene biosynthetic process","synonyms":[{"name":"lycopene anabolism","type":"exact"},{"name":"lycopene biosynthesis","type":"exact"},{"name":"lycopene formation","type":"exact"},{"name":"lycopene synthesis","type":"exact"}],"termid":"GO:1901177"}


id: GO:0106242
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-geranylgeranyl diphosphate = (+)-kolavenyl diphosphate.","definition_xrefs":["RHEA:54676","PMID:29315936","GOC:eab"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular lyase activity","termid":"GO:0016872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"kolavenyl diphosphate synthase activity","secondary_identifiers":["EC:5.5.1.29"],"termid":"GO:0106242"}


id: PATO:0001402
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular potency that is the capacity to form multiple differentiated cell types.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Multipotent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular potency","termid":"PATO:0001397"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multipotent","termid":"PATO:0001402"}


id: PBO:0048324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 35","termid":"PBO:0048324"}


id: GO:0160249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues, occurring through a UDP-glucose intermediate.","definition_xrefs":["MetaCyc:PWY-5067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycogen biosynthetic process","termid":"GO:0005978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0006091"],"is_obsolete":false,"name":"glycogen biosynthetic process via UDP-glucose","termid":"GO:0160249"}


id: MONDO:0034965
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare ophthalmic disorder with cranial nerve involvement (obsolete MONDO:0034965)","secondary_identifiers":["Orphanet:519349"],"termid":"MONDO:0034965","xrefs":{"Monarch":{"xref_id":"0034965"}}}


id: FYPO:0005851
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the biotinylation of one or more specific proteins is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification during vegetative growth","termid":"FYPO:0000329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0002274","FYPO:0001320","FYPO:0002494"],"is_obsolete":false,"name":"abnormal protein biotinylation during vegetative growth","synonyms":[{"name":"abnormal protein biotinylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005851"}


id: PBO:0048011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FERM domain containing 8 pseudogene 1","termid":"PBO:0048011"}


id: GO:0033313
data:
  {"annotated_genes":["SJAG_00364","SJAG_01680","SJAG_03438","SJAG_01837","SJAG_04287","SJAG_03026","SJAG_02771","SJAG_04126","SJAG_04259","SJAG_01082","SJAG_01330","SJAG_03327"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116358,108148],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[80681],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044778"},{"annotations":[93243,117919,108449],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033315"},{"annotations":[90874,117920,108450,116121],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051598"},{"annotations":[118531,77119],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033316"},{"annotations":[115648],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[103160],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"}]},"cv_name":"biological_process","definition":"A signaling process that contributes to a meiotic cell cycle checkpoint that ensures accurate chromosome replication and segregation by preventing progression through a meiotic cell cycle until conditions are suitable for the cell to proceed to the next stage.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle checkpoint signaling","termid":"GO:0000075"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_01082":null,"SJAG_01330":null,"SJAG_01680":null,"SJAG_01837":null,"SJAG_02771":null,"SJAG_03026":null,"SJAG_03327":null,"SJAG_03438":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04287":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"meiotic cell cycle checkpoint signaling","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0072411"],"synonyms":[{"name":"meiotic cell cycle checkpoint","type":"exact"},{"name":"signal transduction involved in meiotic cell cycle checkpoint","type":"exact"}],"termid":"GO:0033313","terms_by_termid":{"GO:0033315":null,"GO:0033316":null,"GO:0044778":null,"GO:0051598":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null}}


id: PBO:0044904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desumoylating isopeptidase 1","termid":"PBO:0044904"}


id: PBO:0039637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminopeptidase O (putative)","termid":"PBO:0039637"}


id: MOD:01056
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3',5'-dibromo-L-tyrosine","termid":"MOD:01023"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(79)Br labeled 3',5'-dibromotyrosine","termid":"MOD:01056"}


id: MONDO:1011205
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Van den Ende-Gupta syndrome that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Van den Ende-Gupta syndrome, non-human animal","termid":"MONDO:1010314"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Van den Ende-Gupta syndrome, dog","secondary_identifiers":["OMIA:002016-9615"],"termid":"MONDO:1011205","xrefs":{"Monarch":{"xref_id":"1011205"}}}


id: GO:0070468
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release by odontoblasts of the extracellular matrix constituents, including collagen, that form the basis of dentin.","definition_xrefs":["GOC:mah","PMID:12856968"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix constituent secretion","termid":"GO:0070278"},{"relation_name":"part_of","term_name":"odontogenesis of dentin-containing tooth","termid":"GO:0042475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"dentin extracellular matrix secretion","synonyms":[{"name":"dentin secretion","type":"related"},{"name":"dentine secretion","type":"related"},{"name":"predentin secretion","type":"related"}],"termid":"GO:0070468"}


id: GO:0015044
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 reduced [rubredoxin] + NAD+ + H+ = 2 oxidized [rubredoxin] + NADH.","definition_xrefs":["RHEA:18597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rubredoxin-NAD(P)H reductase activity","termid":"GO:0015045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"rubredoxin-NAD+ reductase activity","secondary_identifiers":["EC:1.18.1.1","MetaCyc:RUBREDOXIN--NAD+-REDUCTASE-RXN"],"synonyms":[{"name":"DPNH-rubredoxin reductase activity","type":"related"},{"name":"NADH--rubredoxin oxidoreductase activity","type":"related"},{"name":"NADH--rubredoxin reductase activity","type":"related"},{"name":"NADH:rubredoxin oxidoreductase activity","type":"related"},{"name":"NADH:rubredoxin reductase activity","type":"exact"},{"name":"dihydronicotinamide adenine dinucleotide--rubredoxin reductase activity","type":"related"},{"name":"reduced nicotinamide adenine dinucleotide--rubredoxin reductase activity","type":"related"},{"name":"rubredoxin--NAD reductase activity","type":"related"},{"name":"rubredoxin--nicotinamide adenine dinucleotide reductase activity","type":"related"},{"name":"rubredoxin:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0015044"}


id: GO:2000658
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of apolipoprotein binding.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of apolipoprotein binding (obsolete GO:2000658)","termid":"GO:2000658"}


id: FYPO:0007398
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which signaling via a MAP kinase cascade that is activated in response to stress is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","GO:0051403"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular response to stress during vegetative growth","termid":"FYPO:0000968"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal stress-activated MAPK cascade","synonyms":[{"name":"normal MAPK signalling in response to stress","type":"exact"},{"name":"normal stress-activated MAPK cascade during mitotic cell cycle","type":"related"},{"name":"normal stress-activated MAPK cascade during vegetative growth","type":"exact"},{"name":"normal stress-activated MAPK signaling pathway","type":"exact"}],"termid":"FYPO:0007398"}


id: GO:1902348
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a strigolactone stimulus.","definition_xrefs":["GOC:TermGenie","PMID:23893171"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to strigolactone","termid":"GO:1902347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to strigolactone","synonyms":[{"name":"cellular response to strigolactone analog GR24","type":"related"}],"termid":"GO:1902348"}


id: PR:O42963
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nup44 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42963"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin nup44 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19G7.15","synonyms":[{"name":"Spom972h-nup44","type":"exact"},{"name":"nuclear pore protein nup44 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42963"}


id: GO:0031623
data:
  {"annotated_genes":["SJAG_03250"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74832],"is_not":false,"summary":null,"term":"GO:0031623"}]},"cv_name":"biological_process","definition":"A receptor-mediated endocytosis process that results in the movement of receptors from the plasma membrane to the inside of the cell. The process begins when cell surface receptors are monoubiquitinated following ligand-induced activation. Receptors are subsequently taken up into endocytic vesicles from where they are either targeted to the lysosome or vacuole for degradation or recycled back to the plasma membrane.","definition_xrefs":["GOC:mah","GOC:bf","PMID:15006537","PMID:19643732","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor-mediated endocytosis","termid":"GO:0006898"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03250":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"receptor internalization","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0031623","terms_by_termid":{"GO:0031623":null}}


id: GO:0072090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of mesenchymal stem cells, resulting in the expansion of a stem cell population, that contributes to the shaping of a nephron.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal stem cell proliferation","termid":"GO:0097168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal stem cell proliferation involved in nephron morphogenesis","termid":"GO:0072090"}


id: MONDO:0021051
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hemophagocytic syndrome (obsolete MONDO:0021051)","termid":"MONDO:0021051","xrefs":{"Monarch":{"xref_id":"0021051"}}}


id: PBO:0054230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1612","termid":"PBO:0054230"}


id: PBO:0076505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 5","termid":"PBO:0076505"}


id: PBO:0087084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L43B; homologous to mammalian ribosomal protein L37A, no bacterial homolog; RPL43B has a paralog, RPL43A, that arose from the whole genome duplication; protein abundance increases in response to DNA replication stress","termid":"PBO:0087084"}


id: MONDO:0020516
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Thymic neuroendocrine carcinoma is a type of thymic epithelial neoplasm displaying evidence of neuroendocrine differentiation.","definition_xrefs":["Orphanet:99869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroendocrine carcinoma","termid":"MONDO:0002120"},{"relation_name":"is_a","term_name":"thymic carcinoma","termid":"MONDO:0006451"},{"relation_name":"is_a","term_name":"thymic neuroendocrine tumor","termid":"MONDO:0019964"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046","MONDO:0004992"],"is_obsolete":false,"name":"thymic neuroendocrine carcinoma","secondary_identifiers":["NCIT:C171031","MEDGEN:900590","icd11.foundation:381956131","GARD:19696","UMLS:C2210965","SCTID:716653001"],"synonyms":[{"name":"neuroendocrine carcinoma of thymus","type":"exact"},{"name":"thymic neuroendocrine carcinoma","type":"exact"},{"name":"thymus neuroendocrine carcinoma","type":"exact"}],"termid":"MONDO:0020516","xrefs":{"Monarch":{"xref_id":"0020516"}}}


id: PBO:0091413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"electron transfer flavoprotein beta subunit EtfB","termid":"PBO:0091413"}


id: MONDO:0013995
data:
  {"annotated_genes":["SJAG_03363"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88848],"is_not":false,"summary":null,"term":"MONDO:0013995"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"intrahepatic cholestasis","termid":"MONDO:0019072"},{"relation_name":"is_a","term_name":"familial intrahepatic cholestasis","termid":"MONDO:0017290"},{"relation_name":"is_a","term_name":"intrahepatic cholestasis of pregnancy","termid":"MONDO:0100429"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03363":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335","MONDO:0005066"],"is_obsolete":false,"name":"cholestasis, intrahepatic, of pregnancy, 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:767155","DOID:0070229","UMLS:C3554241","GARD:15888","OMIM:614972"],"synonyms":[{"name":"ICP3","type":"related"},{"name":"cholestasis, intrahepatic, of pregnancy 3","type":"exact"},{"name":"cholestasis, intrahepatic, of pregnancy type 3","type":"exact"}],"termid":"MONDO:0013995","terms_by_termid":{"MONDO:0013995":null},"xrefs":{"Monarch":{"xref_id":"0013995"}}}


id: PBO:0053098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late cornified envelope 4A","termid":"PBO:0053098"}


id: PBO:0031740
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_mating_type_switching","termid":"PBO:0031740"}


id: PBO:0075532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speedy/RINGO cell cycle regulator family member E12","termid":"PBO:0075532"}


id: MONDO:0032629
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex I deficiency, nuclear type","termid":"MONDO:0100223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex 1 deficiency, nuclear type 25","secondary_identifiers":["MEDGEN:1648366","DOID:0112067","OMIM:618246","UMLS:C4748806","GARD:16329"],"synonyms":[{"name":"MC1DN25","type":"related"},{"name":"MITOCHONDRIAL COMPLEX I DEFICIENCY, NUCLEAR TYPE 25","type":"related"}],"termid":"MONDO:0032629","xrefs":{"Monarch":{"xref_id":"0032629"}}}


id: GO:0043853
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterotrimeric protein complex composed of a methanol methyltransferase subunit, a corrinoid protein and a methanol-specific corrinoid:coenzyme M methyltransferase subunit. Catalyzes the transfer of a methyl group from methanol to coenzyme M as part of the pathway of methanogenesis from methanol.","definition_xrefs":["PMID:9363780"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase complex","termid":"GO:0034708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"methanol-CoM methyltransferase complex","synonyms":[{"name":"methanol-coenzyme M methyltransferase complex","type":"exact"},{"name":"methanol: CoM methyltransferase complex","type":"exact"},{"name":"methanol: coenzyme M methyltransferase complex","type":"exact"},{"name":"methanol:CoM methyltransferase complex","type":"exact"},{"name":"methanol:coenzyme M methyltransferase complex","type":"exact"}],"termid":"GO:0043853"}


id: GO:1901522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any positive regulation of transcription from RNA polymerase II promoter that is involved in cellular response to chemical stimulus.","definition_xrefs":["GOC:TermGenie","PMID:22840777"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus (obsolete GO:1901522)","synonyms":[{"name":"activation of global transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus","type":"related"},{"name":"activation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus","type":"narrow"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter involved in cellular response to chemical stimulus","type":"related"},{"name":"positive regulation of transcription from Pol II promoter involved in cellular response to chemical stimulus","type":"exact"},{"name":"stimulation of global transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus","type":"narrow"},{"name":"stimulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus","type":"exact"},{"name":"up regulation of global transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus","type":"related"},{"name":"up regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus","type":"exact"},{"name":"up-regulation of global transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus","type":"related"},{"name":"up-regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus","type":"exact"},{"name":"upregulation of global transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus","type":"related"},{"name":"upregulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus","type":"exact"}],"termid":"GO:1901522"}


id: PBO:0040634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BARX homeobox 1","termid":"PBO:0040634"}


id: MONDO:0003477
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An ependymoma that arises from the brain stem.","definition_xrefs":["NCIT:C5098"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain stem glioma","termid":"MONDO:0002911"},{"relation_name":"is_a","term_name":"ependymal tumor of brain","termid":"MONDO:0004245"},{"relation_name":"is_a","term_name":"ependymoma","termid":"MONDO:0016698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"brain stem ependymoma","secondary_identifiers":["MEDGEN:231459","DOID:5508","UMLS:C1332609"],"synonyms":[{"name":"brain stem ependymoma","type":"exact"},{"name":"brainstem ependymoma","type":"exact"},{"name":"ependymoma of brain stem","type":"exact"},{"name":"ependymoma of brainstem","type":"exact"},{"name":"ependymoma of the brain stem","type":"exact"},{"name":"ependymoma of the brainstem","type":"exact"}],"termid":"MONDO:0003477","xrefs":{"Monarch":{"xref_id":"0003477"}}}


id: MONDO:1010037
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cleft palate that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental defect during embryogenesis, non-human animal","termid":"MONDO:1011310"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft palate, non-human animal","secondary_identifiers":["OMIA:000197"],"termid":"MONDO:1010037","xrefs":{"Monarch":{"xref_id":"1010037"}}}


id: PBO:0048297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosidase II alpha subunit","termid":"PBO:0048297"}


id: MONDO:0030873
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiofacioneurodevelopmental syndrome","secondary_identifiers":["OMIM:619123","UMLS:C5436852","MEDGEN:1721861"],"synonyms":[{"name":"CFNDS","type":"exact"}],"termid":"MONDO:0030873","xrefs":{"Monarch":{"xref_id":"0030873"}}}


id: GO:0050311
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: hydrogen sulfide + 3 oxidized ferredoxin + 3 H2O = sulfite + 3 reduced ferredoxin.","definition_xrefs":["MetaCyc:SULFITE-REDUCTASE-FERREDOXIN-RXN","EC:1.8.7.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, iron-sulfur protein as acceptor","termid":"GO:0016673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"sulfite reductase (ferredoxin) activity","secondary_identifiers":["RHEA:23132"],"synonyms":[{"name":"ferredoxin-sulfite reductase activity","type":"related"},{"name":"hydrogen-sulfide:ferredoxin oxidoreductase activity","type":"related"},{"name":"sulphite reductase (ferredoxin) activity","type":"exact"}],"termid":"GO:0050311"}


id: GO:0030183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a precursor cell type acquires the specialized features of a B cell. A B cell is a lymphocyte of B lineage with the phenotype CD19-positive and capable of B cell mediated immunity.","definition_xrefs":["GOC:mah","GO_REF:0000022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte differentiation","termid":"GO:0030098"},{"relation_name":"is_a","term_name":"B cell activation","termid":"GO:0042113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell differentiation","secondary_identifiers":["GO:0042115"],"synonyms":[{"name":"B cell development","type":"related"},{"name":"B lymphocyte differentiation","type":"exact"},{"name":"B-cell differentiation","type":"exact"},{"name":"B-lymphocyte differentiation","type":"exact"}],"termid":"GO:0030183"}


id: PBO:0000599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clr6 histone deacetylase associated PHD protein-1 Cph1","termid":"PBO:0000599"}


id: GO:0009810
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving stilbenes, a class of polyketides formed from a molecule of cinnamic acid and three molecules of malonyl-CoA.","definition_xrefs":["ISBN:3110116251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"},{"relation_name":"is_a","term_name":"olefinic compound metabolic process","termid":"GO:0120254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stilbene metabolic process","synonyms":[{"name":"stilbene metabolism","type":"exact"}],"termid":"GO:0009810"}


id: PBO:0027350
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_cell_separation_after_cytokinesis_gene_mRNA_during_vegetative_growth","termid":"PBO:0027350"}


id: PBO:0062771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily Y member 1 pseudogene","termid":"PBO:0062771"}


id: GO:0061146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a Peyer's patch is generated and organized. Peyer's patches are typically found as nodules associated with gut epithelium with distinct internal structures including B- and T-zones for the activation of lymphocytes.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue morphogenesis","termid":"GO:0048729"},{"relation_name":"part_of","term_name":"Peyer's patch development","termid":"GO:0048541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Peyer's patch morphogenesis","termid":"GO:0061146"}


id: PBO:0072859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAP domain containing ribonucleoprotein","termid":"PBO:0072859"}


id: MONDO:0009150
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypohidrotic ectodermal dysplasia-hypothyroidism-ciliary dyskinesia syndrome is characterized by alopecia, nail dystrophy, ophthalmic complications, thyroid dysfunction (primary hypothyroidism), hypohidrosis, ephelides, enteropathy, and respiratory tract infections due to ciliary dyskinesia, leading to suggestion of the acronym ANother syndrome as alternative name for this condition. It has been described in three patients (two brothers and an unrelated girl). Transmission is autosomal recessive.","definition_xrefs":["Orphanet:1882"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hypohidrotic ectodermal dysplasia-hypothyroidism-ciliary dyskinesia syndrome","secondary_identifiers":["UMLS:C1857052","GARD:2049","MESH:C565604","SCTID:239050000","OMIM:225050","MEDGEN:384046"],"synonyms":[{"name":"HEDH syndrome","type":"exact"},{"name":"another syndrome","type":"exact"},{"name":"ectodermal dysplasia hypohidrotic with hypothyroidism and ciliary dyskinesia","type":"related"},{"name":"ectodermal dysplasia, hypohidrotic, with hypothyroidism and ciliary dyskinesia","type":"related"},{"name":"hypohidrotic ectodermal dysplasia - hypothyroidism - ciliary dyskinesia","type":"related"},{"name":"hypohidrotic ectodermal dysplasia with hypothyroidism","type":"related"},{"name":"hypohidrotic ectodermal dysplasia with hypothyroidism and ciliary dyskinesia","type":"related"}],"termid":"MONDO:0009150","xrefs":{"Monarch":{"xref_id":"0009150"}}}


id: GO:0098684
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribbon synapse between a retinal photoreceptor cell (rod or cone) and a retinal bipolar cell. These contain a plate-like synaptic ribbon.","definition_xrefs":["PMID:15626493"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribbon synapse","termid":"GO:0097470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"photoreceptor ribbon synapse","termid":"GO:0098684"}


id: MONDO:0007710
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Progressive hemifacial atrophy (PHA) is a rare acquired disorder, characterized by unilateral slowly progressive atrophy of the skin and soft tissues of half of the face leading to a sunken appearance. Muscles, cartilage and the underlying bony structures may also be involved.","definition_xrefs":["Orphanet:1214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"facial nerve disorder","termid":"MONDO:0002098"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"facial hemiatrophy","secondary_identifiers":["OMIM:141300","UMLS:C0015458","MEDGEN:8761","MESH:D005150","SCTID:718224004","DOID:1757","GARD:7338","NCIT:C116916"],"synonyms":[{"name":"HFA","type":"related"},{"name":"PHA","type":"related"},{"name":"Romberg hemi-facial atrophy","type":"related"},{"name":"Romberg syndrome","type":"exact"},{"name":"hemifacial atrophy","type":"exact"},{"name":"hemifacial atrophy, progressive","type":"related"},{"name":"parry-Romberg syndrome","type":"exact"},{"name":"progressive facial hemiatrophy","type":"exact"},{"name":"progressive hemifacial atrophy","type":"exact"}],"termid":"MONDO:0007710","xrefs":{"Monarch":{"xref_id":"0007710"}}}


id: GO:0090624
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage of the mRNA in a double-stranded RNA molecule formed by the base pairing of an mRNA with an miRNA.","definition_xrefs":["GOC:BHF","GOC:BHF_miRNA","GOC:rph","PMID:15260970","PMID:19239888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA endonuclease activity producing 5'-phosphomonoesters, hydrolytic mechanism","termid":"GO:0016891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0140098","GO:0016787","GO:0003674","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"endoribonuclease activity, cleaving miRNA-paired mRNA","termid":"GO:0090624"}


id: MONDO:0015744
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal trisomy 19q is a rare chromosomal anomaly syndrome characterized by low birth weight, developmental delay, intellectual disability, short stature, craniofacial dysmorphism (incl. microcephaly, midface hypoplasia, hypertelorism, flat nasal bridge, ear anomalies, short philtrum, downturned corners of the mouth, micrognathia) and a short neck with redundant skin folds. Additional features may include hypotonia, skeletal anomalies (e.g. clino/camptodactyly), seizures and congenital cardiac, urogenital and gastrointestinal malformations.","definition_xrefs":["Orphanet:1717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of the long arm of chromosome 19","termid":"MONDO:0016969"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal trisomy 19q","secondary_identifiers":["MEDGEN:1646863","SCTID:766052008","GARD:18743","UMLS:C4707664"],"synonyms":[{"name":"distal duplication 19q","type":"exact"},{"name":"distal trisomy type 19q","type":"exact"},{"name":"telomeric duplication 19q","type":"exact"},{"name":"trisomy 19qter","type":"exact"}],"termid":"MONDO:0015744","xrefs":{"Monarch":{"xref_id":"0015744"}}}


id: GO:0016134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving saponins, glycosides of plants in which the aglycan (sapogenin) group is a terpene or steroid and the sugar group is a glucose, a galactose, a pentose, a methylpentose or an oligosaccharide. Saponins are powerful surfactant agents and membrane active; they are, hence, toxic to animals on injection.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside metabolic process","termid":"GO:0016137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"saponin metabolic process","synonyms":[{"name":"saponin metabolism","type":"exact"}],"termid":"GO:0016134"}


id: PBO:0046542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group FC1 member 1, envelope","termid":"PBO:0046542"}


id: PBO:0086292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a role in ER delivery of tail-anchored membrane proteins; interacts with Sgt2p; binds to the TRC complex, which inserts proteins into the ER membrane; interacts with Msn5p karyopherin; YBR137W is not an essential gene","termid":"PBO:0086292"}


id: PBO:0031628
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_sporulation","termid":"PBO:0031628"}


id: PBO:0067481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 615, pseudogene","termid":"PBO:0067481"}


id: PBO:0072110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S13 pseudogene 8","termid":"PBO:0072110"}


id: MONDO:0004543
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A yolk sac tumor that arises from the testis and is characterized by the presence of immature glands.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"testicular yolk sac tumor","termid":"MONDO:0003402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"enteric pattern testicular yolk sac tumor","secondary_identifiers":["NCIT:C39932","DOID:8362","MEDGEN:308261","UMLS:C1515304"],"synonyms":[{"name":"testicular yolk Sac tumor, enteric pattern","type":"exact"}],"termid":"MONDO:0004543","xrefs":{"Monarch":{"xref_id":"0004543"}}}


id: MONDO:0015425
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lethal recessive chondrodysplasia is an extremely rare lethal form of chondrodysplasia characterized by severe micromelic dwarfism, short and incurved limbs with normal hands and feet, facial dysmorphism (disproportionately large skull, frontal prominence, slightly flattened nasal bridge and short neck), muscular hypotonia, hyperlaxity of the extremities, and a narrow thorax. Most patients die of respiratory distress during the first hours or weeks of life. There have been no further descriptions in the literature since 1988.","definition_xrefs":["Orphanet:1423"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"chondrodysplasia","termid":"MONDO:0022723"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lethal recessive chondrodysplasia","secondary_identifiers":["UMLS:C4304745","GARD:3399","SCTID:719404009","MEDGEN:930414","icd11.foundation:550352998"],"synonyms":[{"name":"Maroteaux-Stanescu-Cousin syndrome","type":"exact"},{"name":"chondrodysplasia lethal recessive","type":"exact"}],"termid":"MONDO:0015425","xrefs":{"Monarch":{"xref_id":"0015425"}}}


id: MONDO:0004490
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete gestational uterine corpus choriocarcinoma (obsolete MONDO:0004490)","termid":"MONDO:0004490","xrefs":{"Monarch":{"xref_id":"0004490"}}}


id: PBO:0084615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Metalloprotease; involved in N-terminal processing of pro-a-factor to mature form; expressed in both haploids and diploids; one of two yeast homologs of human insulin-degrading enzyme (hIDE); homolog Axl1p is also involved in processing of pro-a-factor","termid":"PBO:0084615"}


id: PBO:0063317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoenolpyruvate carboxykinase 1","termid":"PBO:0063317"}


id: PBO:0036031
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_degradation_of_ribosomal_proteins_during_vegetative_growth","termid":"PBO:0036031"}


id: PBO:0068703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 84, pseudogene","termid":"PBO:0068703"}


id: FYPO:0001555
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the intermediate RNAs formed during tRNA processing differ from wild type in size.","definition_xrefs":["PomBase:mah","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal tRNA processing","termid":"FYPO:0001554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000294","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"formation of abnormal tRNA processing intermediates","synonyms":[{"name":"abnormal tRNA maturation intermediates","type":"exact"},{"name":"formation of abnormal tRNA processing intermediates during mitotic cell cycle","type":"related"},{"name":"formation of abnormal tRNA processing intermediates during vegetative growth","type":"exact"}],"termid":"FYPO:0001555"}


id: PR:O94494
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sim4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94494"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein sim4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18E5.03c","synonyms":[{"name":"Spom972h-sim4","type":"exact"},{"name":"silencing in the middle of the centromere protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94494"}


id: PBO:0034593
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_chromatin_at_boundary_element_IRC1L","termid":"PBO:0034593"}


id: GO:0071766
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a cell wall of the type found in Actinobacteria. The cell wall is the rigid or semi-rigid envelope lying outside the cell membrane. Actinobacterial cell walls contain characteristic mycolic acids, of which some are covalently linked to the cell wall peptidoglycan and others accumulate at the cell surface.","definition_xrefs":["PMID:3149973","GOC:mah","PMID:15653820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidoglycan-based cell wall biogenesis","termid":"GO:0009273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0008150","GO:0071554","GO:0044085"],"is_obsolete":false,"name":"Actinobacterium-type cell wall biogenesis","termid":"GO:0071766"}


id: GO:0006023
data:
  {"annotated_genes":["SJAG_03723","SJAG_00978","SJAG_04868","SJAG_00442","SJAG_02845","SJAG_04728"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73672,72737,76187,75979,111897,80090],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006031"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of aminoglycans, any polymer containing amino groups that consists of more than about 10 monosaccharide residues joined to each other by glycosidic linkages.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycan metabolic process","termid":"GO:0006022"},{"relation_name":"is_a","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"},{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00442":null,"SJAG_00978":null,"SJAG_02845":null,"SJAG_03723":null,"SJAG_04728":null,"SJAG_04868":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aminoglycan biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"aminoglycan anabolism","type":"exact"},{"name":"aminoglycan biosynthesis","type":"exact"},{"name":"aminoglycan formation","type":"exact"},{"name":"aminoglycan synthesis","type":"exact"}],"termid":"GO:0006023","terms_by_termid":{"GO:0006031":null}}


id: FYPO:0001196
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of alpha-D-glucan measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal polysaccharide level","termid":"FYPO:0001077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal alpha-glucan level","synonyms":[{"name":"normal alpha-D-glucan level","type":"exact"},{"name":"normal alpha-glucan accumulation","type":"related"},{"name":"normal alpha-glucan level during mitotic cell cycle","type":"related"},{"name":"normal alpha-glucan level during vegetative growth","type":"exact"},{"name":"normal cellular alpha-glucan level","type":"exact"}],"termid":"FYPO:0001196"}


id: PBO:0040594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB domain and CNC homolog 2","termid":"PBO:0040594"}


id: GO:0061617
data:
  {"annotated_genes":["SJAG_05241","SJAG_02501","SJAG_02028","SJAG_02002"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[58110,76801,80740,109153],"is_not":false,"summary":null,"term":"GO:0061617"}]},"cv_name":"cellular_component","definition":"Mitochondrial inner membrane complex involved in maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane. In Saccharomyces cerevisiae the complex has six subunits: MIC10, MIC12, MIC19, MIC26, MIC27, and MIC60.","definition_xrefs":["PMID:21944719","PMID:22009199","PMID:24687277","PMID:21987634","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner mitochondrial membrane protein complex","termid":"GO:0098800"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02002":null,"SJAG_02028":null,"SJAG_02501":null,"SJAG_05241":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0005739","GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"MICOS complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"Fcj1 complex","type":"exact"},{"name":"MINOS complex","type":"exact"},{"name":"MitOS complex","type":"exact"},{"name":"mitochondrial contact site and cristae organizing system","type":"exact"}],"termid":"GO:0061617","terms_by_termid":{"GO:0061617":null}}


id: PBO:0054666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2072","termid":"PBO:0054666"}


id: GO:1902979
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any DNA replication termination involved in mitotic cell cycle DNA replication.","definition_xrefs":["GOC:TermGenie","GO_REF:0000060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear DNA replication termination","termid":"GO:1902317"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic DNA replication","termid":"GO:1902969"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006260","GO:0006259","GO:0007049"],"is_obsolete":false,"name":"mitotic DNA replication termination","synonyms":[{"name":"DNA replication termination involved in mitotic cell cycle DNA replication","type":"exact"}],"termid":"GO:1902979"}


id: MONDO:0033641
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft palate, proliferative retinopathy, and developmental delay","secondary_identifiers":["UMLS:C5436739","MEDGEN:1765503","OMIM:619074"],"synonyms":[{"name":"CPPRDD","type":"exact"}],"termid":"MONDO:0033641","xrefs":{"Monarch":{"xref_id":"0033641"}}}


id: PBO:0005857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Nsa2 (predicted)","termid":"PBO:0005857"}


id: GO:0052868
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: protein-lysine + protein-lysine = protein N6-(lysyl)-L-lysine + protein. This reaction is the addition of lysine group from one protein to a lysine residue in a second protein, producing N6-(lysyl)-L-lysine.","definition_xrefs":["PMID:20729861"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyltransferase activity","termid":"GO:0016755"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016746","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"protein-lysine lysyltransferase activity","termid":"GO:0052868"}


id: GO:1902341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a xylitol across a membrane. Xylitol is a polyalcohol (pentane-1,2,3,4,5-pentol), produced by hydrogenation of xylose.","definition_xrefs":["PMID:23475614","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyol transmembrane transport","termid":"GO:0015791"},{"relation_name":"is_a","term_name":"carbohydrate transmembrane transport","termid":"GO:0034219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"xylitol transmembrane transport","synonyms":[{"name":"xylitol transport","type":"broad"}],"termid":"GO:1902341"}


id: PBO:0064132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate kinase L/R","termid":"PBO:0064132"}


id: GO:0031693
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an alpha-1D adrenergic receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adrenergic receptor binding","termid":"GO:0031690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"alpha-1D adrenergic receptor binding","synonyms":[{"name":"alpha-1D adrenergic receptor ligand","type":"narrow"}],"termid":"GO:0031693"}


id: PBO:0053521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 515","termid":"PBO:0053521"}


id: PBO:0079896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome c reductase complex assembly factor 5","termid":"PBO:0079896"}


id: GO:0018454
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH + H+.","definition_xrefs":["EC:1.1.1.36"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"acetoacetyl-CoA reductase activity","secondary_identifiers":["UM-BBD_reactionID:r0202","RHEA:22256"],"synonyms":[{"name":"(R)-3-hydroxyacyl-CoA dehydrogenase activity","type":"related"},{"name":"(R)-3-hydroxyacyl-CoA:NADP+ oxidoreductase activity","type":"related"},{"name":"D(-)-beta-hydroxybutyryl CoA-NADP oxidoreductase activity","type":"related"},{"name":"D-3-hydroxyacyl-CoA reductase activity","type":"related"},{"name":"NADP-linked acetoacetyl CoA reductase activity","type":"related"},{"name":"NADPH:acetoacetyl-CoA reductase activity","type":"related"},{"name":"acetoacetyl coenzyme A reductase activity","type":"related"},{"name":"beta-ketoacyl-CoA reductase","type":"broad"},{"name":"hydroxyacyl coenzyme-A dehydrogenase activity","type":"related"},{"name":"short chain beta-ketoacetyl(acetoacetyl)-CoA reductase activity","type":"related"}],"termid":"GO:0018454"}


id: GO:0015418
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O + quaternary ammonium(out) = ADP + H+ + phosphate + quaternary ammonium(in).","definition_xrefs":["RHEA:11036","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quaternary ammonium group transmembrane transporter activity","termid":"GO:0015651"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"ABC-type quaternary ammonium compound transporting activity","secondary_identifiers":["EC:7.6.2.9","MetaCyc:RXN-8638","GO:0102908"],"synonyms":[{"name":"ATP-dependent quaternary-ammonium compound transmembrane transporting activity","type":"related"},{"name":"ATPase-coupled quaternary ammonium compound transmembrane transporting activity","type":"related"},{"name":"glycine betaine/proline porter activity","type":"narrow"},{"name":"quarternary amine transporter activity","type":"broad"},{"name":"quaternary amine uptake transporter activity","type":"related"},{"name":"quaternary-amine-transporting ATPase activity","type":"related"},{"name":"quaternary-ammonium-compound ABC transporter","type":"exact"},{"name":"quaternary-ammonium-compound-transporting ATPase activity","type":"related"}],"termid":"GO:0015418"}


id: GO:0015996
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of chlorophyll, any compound of magnesium complexed in a porphyrin (tetrapyrrole) ring and which functions as a photosynthetic pigment, into less complex products.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyrin-containing compound catabolic process","termid":"GO:0006787"},{"relation_name":"is_a","term_name":"chlorophyll metabolic process","termid":"GO:0015994"},{"relation_name":"is_a","term_name":"pigment catabolic process","termid":"GO:0046149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"chlorophyll catabolic process","synonyms":[{"name":"chlorophyll breakdown","type":"exact"},{"name":"chlorophyll catabolism","type":"exact"},{"name":"chlorophyll degradation","type":"exact"}],"termid":"GO:0015996"}


id: GO:0044800
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The membrane organization process that joins two lipid bilayers to form a single membrane, involving more than one organism.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism membrane fusion (obsolete GO:0044800)","termid":"GO:0044800"}


id: GO:0072662
data:
  {"annotated_genes":["SJAG_05315","SJAG_02797","SJAG_00326","SJAG_03781","SJAG_05950","SJAG_00891","SJAG_02693","SJAG_02619","SJAG_03440","SJAG_00702","SJAG_02997","SJAG_04857","SJAG_01165","SJAG_04763","SJAG_04428","SJAG_03324","SJAG_02034"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73790,98290,81410,72395,71882,113246,104082,75060],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016558"},{"annotations":[72420,75452,63446],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016560"},{"annotations":[119174,117161,100386,65297],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016562"},{"annotations":[92239,97245,113247],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045046"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained at, a location in a peroxisome.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome organization","termid":"GO:0007031"},{"relation_name":"is_a","term_name":"protein localization to organelle","termid":"GO:0033365"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00326":null,"SJAG_00702":null,"SJAG_00891":null,"SJAG_01165":null,"SJAG_02034":null,"SJAG_02619":null,"SJAG_02693":null,"SJAG_02797":null,"SJAG_02997":null,"SJAG_03324":null,"SJAG_03440":null,"SJAG_03781":null,"SJAG_04428":null,"SJAG_04763":null,"SJAG_04857":null,"SJAG_05315":null,"SJAG_05950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007031"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0007031","GO:0008150"],"is_obsolete":false,"name":"protein localization to peroxisome","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"protein localisation to peroxisome","type":"exact"}],"termid":"GO:0072662","terms_by_termid":{"GO:0016558":null,"GO:0016560":null,"GO:0016562":null,"GO:0045046":null}}


id: PBO:0044325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 5","termid":"PBO:0044325"}


id: FYPO:0006115
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of oxidation of one or more specific proteins, or of specific protein sites, is increased, resulting in the accumulation of proteins with oxidative modifications including carbonylated proteins, during S phase of the mitotic cell cycle.","definition_xrefs":["PMID:28640807","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein oxidation during vegetative growth","termid":"FYPO:0000219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0002274","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased protein oxidation during mitotic S phase","synonyms":[{"name":"accumulation of carbonylated proteins during S phase during vegetative growth","type":"related"},{"name":"increased level of disulfides during mitotic S phase","type":"related"},{"name":"increased level of oxidised thiols in proteins during mitotic S phase","type":"related"},{"name":"increased level of oxidized protein thiols during mitotic S phase","type":"related"},{"name":"increased protein oxidation during S phase of mitotic cell cycle","type":"exact"}],"termid":"FYPO:0006115"}


id: PBO:0030712
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_response_to_heat_shock","termid":"PBO:0030712"}


id: FYPO:0002674
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the plasma membrane is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cell periphery","termid":"FYPO:0005572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to plasma membrane","synonyms":[{"name":"normal protein localisation to plasma membrane","type":"exact"},{"name":"normal protein localization to plasma membrane during mitotic cell cycle","type":"related"},{"name":"normal protein localization to plasma membrane during vegetative growth","type":"exact"}],"termid":"FYPO:0002674"}


id: GO:0016566
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any activity that stops or downregulates transcription of specific genes or sets of genes.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete specific transcriptional repressor activity (obsolete GO:0016566)","synonyms":[{"name":"specific transcriptional repressor activity","type":"exact"}],"termid":"GO:0016566"}


id: PBO:0091603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylglycerol phospholipase C Pgc1","termid":"PBO:0091603"}


id: PATO:0001145
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001145 ig m concentration value (obsolete PATO:0001145)","termid":"PATO:0001145"}


id: GO:0008465
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-glycerate + NAD+ = 3-hydroxypyruvate + NADH + H+.","definition_xrefs":["EC:1.1.1.29"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxypyruvate reductase [NAD(P)H] activity","termid":"GO:0016618"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"hydroxypyruvate reductase (NADH) activity","secondary_identifiers":["MetaCyc:GLYCERATE-DEHYDROGENASE-RXN","RHEA:17905"],"synonyms":[{"name":"glycerate dehydrogenase (NAD+) activity","type":"exact"},{"name":"glycerate dehydrogenase activity","type":"broad"},{"name":"hydroxypyruvate dehydrogenase activity","type":"broad"}],"termid":"GO:0008465"}


id: PBO:0030962
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_trimethylation_at_centromere","termid":"PBO:0030962"}


id: PBO:0082863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Core Sm protein Sm D2; part of heteroheptameric complex (with Smb1p, Smd1p, Smd3p, Sme1p, Smx3p, and Smx2p) that is part of the spliceosomal U1, U2, U4, and U5 snRNPs; homolog of human Sm D2","termid":"PBO:0082863"}


id: FYPO:0007872
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which bulk plasma membrane flow from the cell poles to lateral regions does not occur.","definition_xrefs":["PMID:34533984","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal plasma membrane organization","termid":"FYPO:0000813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished plasma membrane flow from cell pole to lateral region","synonyms":[{"name":"abolished bulk plasma membrane flow from cell pole to lateral region","type":"exact"},{"name":"abolished plasma membrane flow from cell pole to lateral region during mitotic cell cycle","type":"related"},{"name":"abolished plasma membrane flow from cell pole to lateral region during vegetative growth","type":"exact"},{"name":"plasma membrane flow from cell pole to lateral region abolished","type":"exact"}],"termid":"FYPO:0007872"}


id: PBO:0111447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex cyclin-dependent protein kinase subunit Srb10","termid":"PBO:0111447"}


id: PBO:0063476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein disulfide isomerase family A member 4","termid":"PBO:0063476"}


id: PBO:0051257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (III)-38-1 (pseudogene)","termid":"PBO:0051257"}


id: PBO:0029567
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_septum_site_selection","termid":"PBO:0029567"}


id: PATO:0000877
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000877 absolute respiratory rate value (obsolete PATO:0000877)","termid":"PATO:0000877"}


id: PBO:0113738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRCA1 associated deubiquitinase 1","termid":"PBO:0113738"}


id: MONDO:0002424
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant epithelial neoplasm that arises from the rectosigmoid area and invades through the muscularis mucosa into the submucosa. The vast majority are adenocarcinomas. About 50% of colorectal carcinomas occur in the rectosigmoid area.","definition_xrefs":["NCIT:C7421"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colon carcinoma","termid":"MONDO:0002032"},{"relation_name":"is_a","term_name":"rectosigmoid junction cancer","termid":"MONDO:0002425"},{"relation_name":"is_a","term_name":"rectal carcinoma","termid":"MONDO:0044937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"rectosigmoid carcinoma","secondary_identifiers":["DOID:2781","UMLS:C1327709","MEDGEN:232963"],"synonyms":[{"name":"carcinoma of rectosigmoid junction","type":"exact"},{"name":"rectosigmoid cancer","type":"exact"},{"name":"rectosigmoid carcinoma","type":"exact"},{"name":"rectosigmoid junction carcinoma","type":"exact"}],"termid":"MONDO:0002424","xrefs":{"Monarch":{"xref_id":"0002424"}}}


id: GO:0102252
data:
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id: GO:0050866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cell activation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of cell activation","termid":"GO:0050865"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"cell activation","termid":"GO:0001775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell activation","synonyms":[{"name":"down regulation of cell activation","type":"exact"},{"name":"down-regulation of cell activation","type":"exact"},{"name":"downregulation of cell activation","type":"exact"},{"name":"inhibition of cell activation","type":"narrow"}],"termid":"GO:0050866"}


id: PBO:0048972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol-3-phosphate acyltransferase 2 pseudogene 1","termid":"PBO:0048972"}


id: GO:0002058
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to uracil.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase binding","termid":"GO:0002061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"uracil binding","termid":"GO:0002058"}


id: PBO:0065696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio RNA binding family member 1","termid":"PBO:0065696"}


id: GO:0046269
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of toluene-4-sulfonate, 4-methylbenzenesulfonate, the anion of sulfonic acid attached to a methylbenzene molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic acid catabolic process","termid":"GO:0016054"},{"relation_name":"is_a","term_name":"toluene-4-sulfonate metabolic process","termid":"GO:0018972"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"toluene-containing compound catabolic process","termid":"GO:0072491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"toluene-4-sulfonate catabolic process","synonyms":[{"name":"4-toluenesulfonate catabolic process","type":"exact"},{"name":"4-toluenesulfonate catabolism","type":"exact"},{"name":"toluene-4-sulfonate breakdown","type":"exact"},{"name":"toluene-4-sulfonate catabolism","type":"exact"},{"name":"toluene-4-sulfonate degradation","type":"exact"},{"name":"toluene-4-sulphonate catabolic process","type":"exact"},{"name":"toluene-4-sulphonate catabolism","type":"exact"}],"termid":"GO:0046269"}


id: PBO:0110470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 263","termid":"PBO:0110470"}


id: MONDO:0000829
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete early-onset Parkinson disease (obsolete MONDO:0000829)","termid":"MONDO:0000829","xrefs":{"Monarch":{"xref_id":"0000829"}}}


id: FYPO:0007562
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which cell growth is decreased relative to normal in a medium containing serine as the nitrogen source.","definition_xrefs":["PomBase:mah","PMID:32313168"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0001985","FYPO:0002060","FYPO:0002057","FYPO:0002058","FYPO:0000139"],"is_obsolete":false,"name":"decreased cell population growth on serine nitrogen source","synonyms":[{"name":"decreased growth on serine nitrogen source","type":"broad"},{"name":"decreased vegetative cell growth on serine nitrogen source","type":"exact"},{"name":"growth defect, slow growth with serine nitrogen source","type":"narrow"},{"name":"reduced cell population growth on serine nitrogen source","type":"exact"},{"name":"slow cell growth on serine nitrogen source","type":"narrow"}],"termid":"FYPO:0007562"}


id: FYPO:0006166
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, branched, has more than one nucleus, and has a larger volume and is longer, than normal. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:jh","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated multinucleate vegetative cell","termid":"FYPO:0001493"},{"relation_name":"is_a","term_name":"inviable branched, swollen, elongated vegetative cell","termid":"FYPO:0004494"},{"relation_name":"is_a","term_name":"branched, swollen, elongated, multinucleate vegetative cell","termid":"FYPO:0006165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000005","FYPO:0000032","FYPO:0000004"],"is_obsolete":false,"name":"inviable branched, swollen, elongated, multinucleate vegetative cell","synonyms":[{"name":"inviable branched, elongated, swollen, multinucleate vegetative cell","type":"exact"},{"name":"inviable branched, swollen, elongated, multinucleate cell during vegetative growth","type":"exact"},{"name":"inviable branched, swollen, elongated, multinucleate vegetative cell during mitotic cell cycle","type":"related"},{"name":"lethal; branched, swollen, elongated, multinucleate vegetative cell","type":"exact"}],"termid":"FYPO:0006166"}


id: PBO:0029371
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_medial_cortex_during_vegetative_growth","termid":"PBO:0029371"}


id: PBO:0078390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Phe (anticodon GAA) 1-5","termid":"PBO:0078390"}


id: MONDO:0850170
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A childhood spinal muscular atrophy that is evident before birth and characterized by diminished movement in the womb, joint deformities, extremely weak muscle tone and very weak respiratory muscles.","definition_xrefs":["DOID:0080667"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"spinal muscular atrophy, type 1","termid":"MONDO:0009669"},{"relation_name":"is_a","term_name":"spinal muscular atrophy","termid":"MONDO:0001516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"spinal muscular atrophy type 0","secondary_identifiers":["MEDGEN:1843403","UMLS:C4324643"],"termid":"MONDO:0850170","xrefs":{"Monarch":{"xref_id":"0850170"}}}


id: GO:0034749
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the Scribble protein (a cell polarity determinant) and the tumor suppressor protein adenomatous polyposis coli (APC); may be involved in the control of cell proliferation.","definition_xrefs":["PMID:16611247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"Scrib-APC complex","synonyms":[{"name":"hScrib-APC complex","type":"narrow"}],"termid":"GO:0034749"}


id: PBO:0084108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HDEL receptor; an integral membrane protein that binds to the HDEL motif in proteins destined for retention in the endoplasmic reticulum; has a role in maintenance of normal levels of ER-resident proteins","termid":"PBO:0084108"}


id: PR:Q9URV9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A sulfiredoxin-1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02428","PANTHER:PTHR21348:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfiredoxin (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC106.02c","secondary_identifiers":["UniProtKB:Q9URV9"],"synonyms":[{"name":"Spom972h-SRXN1","type":"exact"}],"termid":"PR:Q9URV9"}


id: PBO:0003879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CGI-48 family (predicted)","termid":"PBO:0003879"}


id: PBO:0055977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRRK2 divergent transcript","termid":"PBO:0055977"}


id: PBO:0057727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1302-11","termid":"PBO:0057727"}


id: PBO:0079946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 1","termid":"PBO:0079946"}


id: FYPO:0008334
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a ribosome tethering to the ribosome function is abolished.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"abolished ribosome to mitochondrion tethering","termid":"FYPO:0008334"}


id: PR:O42978
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A U6 snRNA-associated Sm-like protein LSm5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03650","PANTHER:PTHR20971:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U6 snRNA-associated Sm-like protein LSm5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC20F10.09","secondary_identifiers":["UniProtKB:O42978"],"synonyms":[{"name":"Spom972h-LSM5","type":"exact"}],"termid":"PR:O42978"}


id: FYPO:0002143
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of reactive oxygen species (ROS) measured in a cell is lower than normal when the population in which the cell is found is in stationary phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell","termid":"FYPO:0000991"},{"relation_name":"is_a","term_name":"altered cellular reactive oxygen species level","termid":"FYPO:0002142"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular reactive oxygen species level in stationary phase","synonyms":[{"name":"decreased ROS accumulation in stationary phase","type":"related"},{"name":"decreased cellular ROS accumulation in stationary phase","type":"related"},{"name":"decreased cellular ROS level in stationary phase","type":"exact"},{"name":"decreased cellular reactive oxygen species accumulation in stationary phase","type":"related"},{"name":"reduced cellular ROS level in stationary phase","type":"exact"},{"name":"reduced cellular reactive oxygen species level in stationary phase","type":"exact"}],"termid":"FYPO:0002143"}


id: GO:1900585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving arugosin.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"arugosin metabolic process","synonyms":[{"name":"arugosin metabolism","type":"exact"}],"termid":"GO:1900585"}


id: PBO:0045188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJB6 pseudogene 1","termid":"PBO:0045188"}


id: PBO:0056548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanin concentrating hormone receptor 2","termid":"PBO:0056548"}


id: GO:0003175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the tricuspid valve over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrioventricular valve development","termid":"GO:0003171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tricuspid valve development","termid":"GO:0003175"}


id: PBO:0075370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRY-box transcription factor 8","termid":"PBO:0075370"}


id: PBO:0081245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 16","termid":"PBO:0081245"}


id: MONDO:0031055
data:
  {"annotated_genes":["SJAG_04909"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87519],"is_not":false,"summary":null,"term":"MONDO:0031055"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"genetic developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04909":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy 107","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1823988","OMIM:620033","UMLS:C5774215","DOID:0070393"],"synonyms":[{"name":"DEE107","type":"exact"},{"name":"developmental and epileptic encephalopathy 107","type":"exact"}],"termid":"MONDO:0031055","terms_by_termid":{"MONDO:0031055":null},"xrefs":{"Monarch":{"xref_id":"0031055"}}}


id: PBO:0047534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FYVE, RhoGEF and PH domain containing 6","termid":"PBO:0047534"}


id: PBO:0084474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mating pheromone a-factor; made by a cells; interacts with alpha cells to induce cell cycle arrest and other responses leading to mating; biogenesis involves C-terminal modification, N-terminal proteolysis, and export; also encoded by MFA1","termid":"PBO:0084474"}


id: PBO:0031252
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_targeting_via_MVB_pathway","termid":"PBO:0031252"}


id: GO:2000931
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellobiose metabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"regulation of cellobiose metabolic process","termid":"GO:2000930"},{"relation_name":"negatively_regulates","term_name":"cellobiose metabolic process","termid":"GO:2000891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellobiose metabolic process","synonyms":[{"name":"negative regulation of cellobiose metabolism","type":"exact"}],"termid":"GO:2000931"}


id: PBO:0067512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 653, pseudogene","termid":"PBO:0067512"}


id: PBO:0036328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eRF1 methyltransferase Mtq2 (predicted)","termid":"PBO:0036328"}


id: PBO:0034721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic and meiotic cohesin complex subunit Pds5","termid":"PBO:0034721"}


id: GO:0045069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of viral genome replication.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of viral life cycle","termid":"GO:1903900"},{"relation_name":"regulates","term_name":"viral genome replication","termid":"GO:0019079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of viral genome replication","termid":"GO:0045069"}


id: GO:0034246
data:
  {"annotated_genes":["SJAG_03289","SJAG_00634"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89226,99994],"is_not":false,"summary":null,"term":"GO:0034246"}]},"cv_name":"molecular_function","definition":"Interacting with the mitochondrial promoter DNA to modulate transcription by the mitochondrial RNA polymerase.","definition_xrefs":["GOC:txnOH-2018","PMID:18391175"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription regulator activity","termid":"GO:0140110"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00634":null,"SJAG_03289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140110"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140110","GO:0003674"],"is_obsolete":false,"name":"mitochondrial transcription factor activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0001142","GO:0000998","GO:0001143","GO:0001144"],"synonyms":[{"name":"mitochondrial DNA-binding transcription factor activity","type":"narrow"},{"name":"mitochondrial RNA polymerase binding promoter specificity activity","type":"exact"},{"name":"mitochondrial RNA polymerase core promoter proximal region sequence-specific DNA binding transcription factor activity","type":"exact"},{"name":"mitochondrial RNA polymerase core promoter sequence-specific DNA binding transcription factor activity","type":"exact"},{"name":"mitochondrial RNA polymerase promoter specificity activity","type":"related"},{"name":"mitochondrial RNA polymerase transcription factor activity, sequence-specific DNA binding","type":"exact"},{"name":"mitochondrial polymerase transcription factor activity","type":"exact"},{"name":"mitochondrial sequence-specific DNA binding transcription factor activity","type":"exact"},{"name":"mitochondrial sequence-specific DNA-binding transcription factor activity","type":"narrow"},{"name":"mitochondrial transcription initiation factor activity","type":"exact"},{"name":"sequence-specific DNA binding mitochondrial RNA polymerase transcription factor activity","type":"exact"},{"name":"transcription factor activity, mitochondrial RNA polymerase core promoter proximal region sequence-specific binding","type":"exact"},{"name":"transcription factor activity, mitochondrial RNA polymerase core promoter sequence-specific DNA binding","type":"exact"},{"name":"transcription factor activity, mitochondrial proximal promoter sequence-specific binding","type":"exact"}],"termid":"GO:0034246","terms_by_termid":{"GO:0034246":null}}


id: FYPO:0004657
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, and has one nucleus and more than one septum.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"multiseptate vegetative cell","termid":"FYPO:0000118"},{"relation_name":"is_a","term_name":"multiseptate vegetative cell","termid":"FYPO:0000118"},{"relation_name":"is_a","term_name":"inviable mononucleate vegetative cell","termid":"FYPO:0006430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0000032"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000004","FYPO:0005447","FYPO:0000032","FYPO:0000631","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"inviable mononucleate multiseptate vegetative cell","secondary_identifiers":["FYPO:0002001"],"synonyms":[{"name":"cytokinesis in the absence of nuclear division","type":"related"},{"name":"cytokinesis without nuclear division","type":"related"},{"name":"inviable mononucleate multiseptate cell during vegetative growth","type":"exact"},{"name":"inviable mononucleate multiseptate vegetative cell during mitotic cell cycle","type":"related"},{"name":"lethal; mononucleate multiseptate vegetative cell","type":"exact"},{"name":"mononucleate multiseptate vegetative cell","type":"exact"},{"name":"mononucleate multiseptate vegetative cell during mitotic cell cycle","type":"related"},{"name":"septation in the absence of nuclear division","type":"related"},{"name":"septation independent of mitosis","type":"related"},{"name":"septation without nuclear division","type":"related"},{"name":"vegetative cell with premature septation","type":"related"}],"termid":"FYPO:0004657"}


id: GO:0045139
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete copper sensitivity/resistance (obsolete GO:0045139)","synonyms":[{"name":"copper sensitivity/resistance","type":"exact"}],"termid":"GO:0045139"}


id: MOD:00832
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to N4-(N-acetaminogalactosyl)-L-asparagine.","definition_xrefs":["RESID:AA0420","PubMed:8262914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetylaminogalactosylated residue","termid":"MOD:00563"},{"relation_name":"is_a","term_name":"N4-(N-acetylamino)hexosyl-L-asparagine","termid":"MOD:01674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"N4-(N-acetylamino)galactosyl-L-asparagine","synonyms":[{"name":"(2S)-2-amino-4-(2-acetamido-2-deoxy-beta-D-galactopyranosyl)amino-4-oxobutanoic acid","type":"exact"},{"name":"CARBOHYD N-linked (GalNAc) asparagine","type":"exact"},{"name":"HexNAc","type":"related"},{"name":"N4-(2-acetamido-2-deoxy-beta-D-galactopyranosyl)-L-asparagine","type":"exact"},{"name":"N4-(2-acetylamino-2-deoxy-beta-D-galactopyranosyl)-L-asparagine","type":"exact"},{"name":"N4-(N-acetylamino)galactosyl-L-asparagine","type":"exact"},{"name":"N4-(N-acetylgalactosaminyl)asparagine","type":"exact"},{"name":"N4-asparagine-beta-N-acetylgalactosaminide","type":"exact"},{"name":"N4-glycosyl-L-asparagine","type":"exact"},{"name":"N4-glycosylasparagine","type":"exact"},{"name":"N4GalNAcAsn","type":"exact"}],"termid":"MOD:00832"}


id: GO:0015513
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of nitrite from one side of the membrane to the other, up the solute's concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. In high affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrate transmembrane transporter activity","termid":"GO:0015112"},{"relation_name":"is_a","term_name":"secondary active transmembrane transporter activity","termid":"GO:0015291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"high-affinity secondary active nitrite transmembrane transporter activity","synonyms":[{"name":"nitrite uptake permease activity","type":"exact"}],"termid":"GO:0015513"}


id: PR:O59671
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pof4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59671"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A3.08","synonyms":[{"name":"Spom972h-pof4","type":"exact"},{"name":"protein pof4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59671"}


id: PBO:0043823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcineurin like phosphoesterase domain containing 1","termid":"PBO:0043823"}


id: PBO:0035924
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H2B-K119_ubiquitination_during_vegetative_growth","termid":"PBO:0035924"}


id: GO:0003155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor that contributes to the determination of lateral mesoderm left/right asymmetry.","definition_xrefs":["GOC:mtg_heart"],"gene_count":0,"genotype_count":0,"name":"obsolete BMP signaling pathway involved in determination of lateral mesoderm left/right asymmetry (obsolete GO:0003155)","synonyms":[{"name":"BMP signaling pathway involved in lateral mesoderm left/right asymmetry determination","type":"exact"},{"name":"BMP signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"}],"termid":"GO:0003155"}


id: PBO:0086606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; functions together with HAM1 to mediate resistance to 5-FU; specifically reduces the incorporation of 5-FU into RNA, without affecting uptake or incorporation of uracil into RNA; proposed to be involved in the metabolism of purine and pyrimidine base analogues; deletion mutants are sensitive to HAP and AHA","termid":"PBO:0086606"}


id: GO:0030813
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of nucleotides.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"regulation of nucleotide catabolic process","termid":"GO:0030811"},{"relation_name":"is_a","term_name":"positive regulation of nucleotide metabolic process","termid":"GO:0045981"},{"relation_name":"positively_regulates","term_name":"nucleotide catabolic process","termid":"GO:0009166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of nucleotide catabolic process","synonyms":[{"name":"activation of nucleotide catabolic process","type":"narrow"},{"name":"positive regulation of nucleotide breakdown","type":"exact"},{"name":"positive regulation of nucleotide catabolism","type":"exact"},{"name":"positive regulation of nucleotide degradation","type":"exact"},{"name":"stimulation of nucleotide catabolic process","type":"narrow"},{"name":"up regulation of nucleotide catabolic process","type":"exact"},{"name":"up-regulation of nucleotide catabolic process","type":"exact"},{"name":"upregulation of nucleotide catabolic process","type":"exact"}],"termid":"GO:0030813"}


id: GO:1902127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving (-)-lariciresinol.","definition_xrefs":["PMID:15949826","GOC:TermGenie","PMID:9872995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lignan metabolic process","termid":"GO:0009806"},{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"(-)-lariciresinol metabolic process","synonyms":[{"name":"(-)-lariciresinol metabolism","type":"exact"}],"termid":"GO:1902127"}


id: GO:0062227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of adult somatic muscle development.","definition_xrefs":["PMID:16643882","PMID:25758712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of somatic muscle development","termid":"GO:0062224"},{"relation_name":"is_a","term_name":"regulation of adult somatic muscle development","termid":"GO:0062226"},{"relation_name":"positively_regulates","term_name":"adult somatic muscle development","termid":"GO:0007527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of adult somatic muscle development","termid":"GO:0062227"}


id: PBO:0120143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that interacts with the Arp2/3 complex; interaction with Arp2/3 stimulates actin filament debranching and inhibits actin nucleation; debranching activity is enhanced by Crn1p with which it forms a high affinity ternary complex (Crn1-Aim7-Arp2/3); sequence similarity to Cof1p and to human glia maturation factor (GMF); null mutant displays elevated mitochondrial genome loss","termid":"PBO:0120143"}


id: PBO:0047189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 207 member B, pseudogene","termid":"PBO:0047189"}


id: MONDO:0013923
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive primary microcephaly in which the cause of the disease is a mutation in the CEP152 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive primary microcephaly","termid":"MONDO:0016660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0700092"],"is_obsolete":false,"name":"microcephaly 9, primary, autosomal recessive","secondary_identifiers":["DOID:0070292","MEDGEN:766800","OMIM:614852","GARD:15855","UMLS:C3553886"],"synonyms":[{"name":"CEP152 autosomal recessive primary microcephaly","type":"exact"},{"name":"MCPH9","type":"related"},{"name":"autosomal recessive primary microcephaly caused by mutation in CEP152","type":"exact"},{"name":"microcephaly 9, primary, autosomal recessive","type":"exact"}],"termid":"MONDO:0013923","xrefs":{"Monarch":{"xref_id":"0013923"}}}


id: GO:0098729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Division of a germline stem cell to produce two germline stem cells of the same type as the parent.","definition_xrefs":["PMID:19948499","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germ-line stem cell division","termid":"GO:0042078"},{"relation_name":"is_a","term_name":"symmetric stem cell division","termid":"GO:0098724"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"germline stem cell symmetric division","termid":"GO:0098729"}


id: PBO:0027979
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_cellular_response_to_cadmium_ion","termid":"PBO:0027979"}


id: GO:1902312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of copper ion transmembrane transport.","definition_xrefs":["PMID:21489137","GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of copper ion transmembrane transport","termid":"GO:1902311"},{"relation_name":"is_a","term_name":"negative regulation of cation transmembrane transport","termid":"GO:1904063"},{"relation_name":"negatively_regulates","term_name":"copper ion transmembrane transport","termid":"GO:0035434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"negative regulation of copper ion transmembrane transport","synonyms":[{"name":"down regulation of copper cation transmembrane transport","type":"exact"},{"name":"down regulation of copper ion membrane transport","type":"exact"},{"name":"down regulation of copper ion transmembrane transport","type":"exact"},{"name":"down-regulation of copper cation transmembrane transport","type":"exact"},{"name":"down-regulation of copper ion membrane transport","type":"exact"},{"name":"down-regulation of copper ion transmembrane transport","type":"exact"},{"name":"downregulation of copper cation transmembrane transport","type":"exact"},{"name":"downregulation of copper ion membrane transport","type":"exact"},{"name":"downregulation of copper ion transmembrane transport","type":"exact"},{"name":"inhibition of copper cation transmembrane transport","type":"narrow"},{"name":"inhibition of copper ion membrane transport","type":"narrow"},{"name":"inhibition of copper ion transmembrane transport","type":"narrow"},{"name":"negative regulation of copper cation transmembrane transport","type":"exact"},{"name":"negative regulation of copper ion membrane transport","type":"exact"}],"termid":"GO:1902312"}


id: GO:0009467
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete monoheme class I cytochrome c (obsolete GO:0009467)","synonyms":[{"name":"monoheme class I cytochrome c","type":"exact"}],"termid":"GO:0009467"}


id: PBO:0059036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MMP24 opposite strand","termid":"PBO:0059036"}


id: GO:0022026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of a epidermal growth factor receptor binding to one of its physiological ligands that contributes to the commitment of a neuroblast to a neuronal fate. The neuron will reside in the forebrain.","definition_xrefs":["GOC:dgh","GOC:cls","GO_REF:0000021","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermal growth factor receptor signaling pathway","termid":"GO:0007173"},{"relation_name":"part_of","term_name":"commitment of multipotent stem cells to neuronal lineage in forebrain","termid":"GO:0021898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"epidermal growth factor signaling pathway involved in forebrain neuron fate commitment","synonyms":[{"name":"epidermal growth factor signalling pathway involved in forebrain neuron fate commitment","type":"exact"}],"termid":"GO:0022026"}


id: MONDO:0003612
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm that affects the uterine ligament.","definition_xrefs":["NCIT:C126498"],"direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system cancer","termid":"MONDO:0000637"},{"relation_name":"is_a","term_name":"cervical cancer","termid":"MONDO:0002974"},{"relation_name":"is_a","term_name":"uterine ligament neoplasm","termid":"MONDO:0021629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"uterine ligament cancer","secondary_identifiers":["DOID:5727","MEDGEN:923070","UMLS:C0864950"],"synonyms":[{"name":"cancer of uterine ligament","type":"exact"},{"name":"malignant neoplasm of uterine ligament","type":"exact"},{"name":"malignant uterine ligament neoplasm","type":"exact"},{"name":"tumour of the uterine ligament","type":"related"},{"name":"uterine ligament cancer","type":"exact"}],"termid":"MONDO:0003612","xrefs":{"Monarch":{"xref_id":"0003612"}}}


id: PBO:0063253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin beta cluster","termid":"PBO:0063253"}


id: GO:0003057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulation of the force of heart muscle contraction mediated by chemical signaling, hormonal, autocrine or paracrine.","definition_xrefs":["GOC:mtg_cardio","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of the force of heart contraction","termid":"GO:0002026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of the force of heart contraction by chemical signal","synonyms":[{"name":"chemical cardiac inotropy","type":"exact"},{"name":"regulation of the force of heart muscle contraction by chemical signal","type":"related"}],"termid":"GO:0003057"}


id: PR:Q9UUI3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sap145 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUI3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor sap145 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F8.10c","synonyms":[{"name":"Spom972h-sap145","type":"exact"},{"name":"spliceosome-associated protein 145 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UUI3"}


id: MONDO:0009285
data:
  {"annotated_genes":["SJAG_01612","SJAG_03316"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88015,88016],"is_not":false,"summary":null,"term":"MONDO:0009285"}]},"cv_name":"mondo","definition":"Gamma-glutamyl transpeptidase deficiency is characterized by increased glutathione concentration in the plasma and urine.","definition_xrefs":["Orphanet:33573"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited glutathione metabolism disease","termid":"MONDO:0040566"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01612":null,"SJAG_03316":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019241"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0019241","MONDO:0005066"],"is_obsolete":false,"name":"gamma-glutamyl transpeptidase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C536836","OMIM:231950","icd11.foundation:2074850874","SCTID:78586005","GARD:10099","DOID:0111257","MEDGEN:82813","ICD9:270.8","UMLS:C0268524"],"synonyms":[{"name":"GGT deficiency","type":"related"},{"name":"GGT1 deficiency","type":"related"},{"name":"GTG deficiency","type":"related"},{"name":"gamma-glutamyltransferase deficiency","type":"related"},{"name":"gamma-glutamyltranspeptidase deficiency","type":"related"},{"name":"glutathioninuria","type":"exact"},{"name":"glutathionuria","type":"exact"},{"name":"inborn error of glutathione hydrolase activity","type":"exact"},{"name":"inborn glutathione hydrolase activity disorder","type":"exact"},{"name":"rare inborn error of glutathione hydrolase activity","type":"exact"}],"termid":"MONDO:0009285","terms_by_termid":{"MONDO:0009285":null},"xrefs":{"Monarch":{"xref_id":"0009285"}}}


id: RO:0002252
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"b connecting-branch-of s iff b is connected to s, and there exists some tree-like structure t such that the mereological sum of b plus s is either the same as t or a branching-part-of t.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_branching_relationship_with","termid":"RO:0002375"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"connecting_branch_of","termid":"RO:0002252"}


id: MONDO:0004894
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"strabismus","termid":"MONDO:0003432"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclotropia","secondary_identifiers":["SCTID:70486007","UMLS:C0152209","DOID:9838","ICD10CM:H50.41","ICD9:378.33","icd11.foundation:1259996412","MEDGEN:508927"],"termid":"MONDO:0004894","xrefs":{"Monarch":{"xref_id":"0004894"}}}


id: PBO:0087701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the RES complex; RES complex is required for nuclear pre-mRNA retention and splicing; involved in bud-site selection; diploid mutants display a unipolar budding pattern instead of the wild-type bipolar pattern due to a specific defect in MATa1 pre-mRNA splicing which leads to haploid gene expression in diploids","termid":"PBO:0087701"}


id: PBO:0042392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD300 molecule like family member f","termid":"PBO:0042392"}


id: GO:0051755
data:
  {"annotated_genes":["SJAG_02104","SJAG_04457"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95694,112030],"is_not":false,"summary":null,"term":"GO:0051755"}]},"cv_name":"biological_process","definition":"The cell cycle process in which sister chromatid arms are physically detached from each other during meiosis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"meiosis I","termid":"GO:0007127"},{"relation_name":"part_of","term_name":"meiotic sister chromatid separation","termid":"GO:0051757"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02104":null,"SJAG_04457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0140013"],"is_obsolete":false,"name":"meiotic sister chromatid arm separation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0051755","terms_by_termid":{"GO:0051755":null}}


id: GO:0043079
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The nucleus of an antipodal cell, one of three cells of the embryo sac in angiosperms, found at the chalazal end of the embryo away from the point of entry of the pollen tube, and its descendents.","definition_xrefs":["CL:0000537","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"megasporocyte nucleus","termid":"GO:0043076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575"],"is_obsolete":false,"name":"antipodal cell nucleus","termid":"GO:0043079"}


id: PBO:0083038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Delta subunit of the central stalk of mitochondrial F1F0 ATP synthase; F1F0 ATP synthase is a large, evolutionarily conserved enzyme complex required for ATP synthesis; F1 translationally regulates ATP6 and ATP8 expression to achieve a balanced output of ATP synthase genes encoded in nucleus and mitochondria; phosphorylated","termid":"PBO:0083038"}


id: PBO:0000252
data:
  {"annotation_feature_type":"gene","cv_name":"pathway","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mkh1-Pek1-Spm1 MAP kinase","termid":"PBO:0000252"}


id: PBO:0083711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein involved in regulation of OLE1 transcription; inactive ER form dimerizes and one subunit is then activated by ubiquitin/proteasome-dependent processing followed by nuclear targeting; MGA2 has a paralog, SPT23, that arose from the whole genome duplication","termid":"PBO:0083711"}


id: GO:1901938
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving (-)-exo-alpha-bergamotene.","definition_xrefs":["GOC:TermGenie","PMID:22867794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpene metabolic process","termid":"GO:0051761"},{"relation_name":"is_a","term_name":"olefin metabolic process","termid":"GO:1900673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"(-)-exo-alpha-bergamotene metabolic process","synonyms":[{"name":"(-)-exo-alpha-bergamotene metabolism","type":"exact"}],"termid":"GO:1901938"}


id: GO:0003270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell contributing to the modulation of the frequency, rate or extent of cardioblast proliferation in the secondary heart field. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Notch signaling involved in heart development","termid":"GO:0061314"},{"relation_name":"part_of","term_name":"regulation of secondary heart field cardioblast proliferation","termid":"GO:0003266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"Notch signaling pathway involved in regulation of secondary heart field cardioblast proliferation","synonyms":[{"name":"Notch signaling pathway involved in regulation of second heart field cardioblast proliferation","type":"related"},{"name":"Notch signalling pathway involved in regulation of secondary heart field cardioblast proliferation","type":"exact"}],"termid":"GO:0003270"}


id: FYPO:0002681
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the phosphorylation of one or more specific proteins occurs to a greater extent than normal when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation","termid":"FYPO:0002680"},{"relation_name":"is_a","term_name":"abnormal protein phosphorylation during nitrogen starvation","termid":"FYPO:0005033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002274","FYPO:0002494","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased protein phosphorylation during nitrogen starvation","synonyms":[{"name":"increased protein phosphorylation during cellular response to nitrogen starvation","type":"exact"},{"name":"increased protein phosphorylation during nitrogen depletion","type":"exact"},{"name":"increased protein phosphorylation during nitrogen deprivation","type":"exact"}],"termid":"FYPO:0002681"}


id: MONDO:0002577
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant mesenchymal tumor with skeletal muscle differentiation, arising from the extrahepatic bile ducts.","definition_xrefs":["NCIT:C5860"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liver rhabdomyosarcoma","termid":"MONDO:0002849"},{"relation_name":"is_a","term_name":"extrahepatic bile duct sarcoma","termid":"MONDO:0024658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"extrahepatic bile duct rhabdomyosarcoma","secondary_identifiers":["MEDGEN:473530","UMLS:C2064434","DOID:3254"],"synonyms":[{"name":"bile duct rhabdomyosarcoma","type":"related"},{"name":"bile duct rhabdomyosarcoma (disease)","type":"exact"},{"name":"extrahepatic bile duct rhabdomyosarcoma","type":"exact"},{"name":"extrahepatic bile duct rhabdomyosarcoma (disease)","type":"exact"},{"name":"rhabdomyosarcoma (disease) of extrahepatic bile duct","type":"exact"},{"name":"rhabdomyosarcoma of extrahepatic bile duct","type":"exact"},{"name":"rhabdomyosarcoma of the bile duct","type":"exact"},{"name":"rhabdomyosarcoma of the extrahepatic bile duct","type":"exact"}],"termid":"MONDO:0002577","xrefs":{"Monarch":{"xref_id":"0002577"}}}


id: PBO:0076033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STK32A antisense RNA 1","termid":"PBO:0076033"}


id: MONDO:0002954
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A superficial basal cell carcinoma of the skin characterized by the presence of lobules of basaloid cells which are separated by large distances and represent multifocal discrete tumors.","definition_xrefs":["NCIT:C4108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin basal cell carcinoma","termid":"MONDO:0005341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"superficial multifocal basal cell carcinoma","secondary_identifiers":["ICDO:8091/3","SCTID:403914000","DOID:4300","MEDGEN:87200","UMLS:C0334256"],"synonyms":[{"name":"multicentric basal cell carcinoma","type":"exact"},{"name":"multifocal superficial basal cell carcinoma","type":"exact"},{"name":"multifocal superficial basal cell carcinoma (morphologic abnormality)","type":"exact"},{"name":"superficial basal cell carcinoma","type":"related"},{"name":"superficial multicentric basal-cell carcinoma","type":"exact"},{"name":"superficial multifocal basal cell carcinoma","type":"exact"}],"termid":"MONDO:0002954","xrefs":{"Monarch":{"xref_id":"0002954"}}}


id: PBO:0069078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 325, pseudogene","termid":"PBO:0069078"}


id: GO:0052699
data:
  {"annotated_genes":["SJAG_03856","SJAG_00832"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105446,113392],"is_not":false,"summary":null,"term":"GO:0052699"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ergothioneine, a naturally occurring metabolite of histidine with antioxidant properties.","definition_xrefs":["Wikipedia:Ergothioneine"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur amino acid biosynthetic process","termid":"GO:0000097"},{"relation_name":"is_a","term_name":"amino-acid betaine biosynthetic process","termid":"GO:0006578"},{"relation_name":"is_a","term_name":"ergothioneine metabolic process","termid":"GO:0052698"},{"relation_name":"is_a","term_name":"modified histidine biosynthetic process","termid":"GO:0052703"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00832":null,"SJAG_03856":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"ergothioneine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"(2S)-3-(2-mercapto-1H-imidazol-5-yl)-2-(trimethylazaniumyl)propanoate biosynthetic process","type":"exact"},{"name":"2-mercaptoergothioneine trimethylbetaine anabolism","type":"exact"},{"name":"2-mercaptoergothioneine trimethylbetaine biosynthesis","type":"exact"},{"name":"2-mercaptoergothioneine trimethylbetaine biosynthetic process","type":"exact"},{"name":"2-mercaptoergothioneine trimethylbetaine formation","type":"exact"},{"name":"2-mercaptoergothioneine trimethylbetaine synthesis","type":"exact"},{"name":"ergothioneine anabolism","type":"exact"},{"name":"ergothioneine biosynthesis","type":"exact"},{"name":"ergothioneine formation","type":"exact"},{"name":"ergothioneine synthesis","type":"exact"}],"termid":"GO:0052699","terms_by_termid":{"GO:0052699":null}}


id: GO:0060844
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of a cell to an arterial endothelial cell fate and its capacity to differentiate into an arterial endothelial cell.","definition_xrefs":["GOC:dph","GOC:tb","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel endothelial cell fate commitment","termid":"GO:0060846"},{"relation_name":"part_of","term_name":"arterial endothelial cell differentiation","termid":"GO:0060842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"arterial endothelial cell fate commitment","termid":"GO:0060844"}


id: MONDO:0000996
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare non-Hodgkin or Hodgkin lymphoma that arises from the prostate gland.","definition_xrefs":["NCIT:C5533"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoma","termid":"MONDO:0005062"},{"relation_name":"is_a","term_name":"prostate cancer","termid":"MONDO:0008315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"prostate lymphoma","secondary_identifiers":["MEDGEN:235500","UMLS:C1335512","DOID:10290"],"synonyms":[{"name":"lymphoma of prostate","type":"exact"},{"name":"lymphoma of prostate gland","type":"exact"},{"name":"lymphoma of the prostate","type":"exact"},{"name":"primary prostate lymphoma","type":"exact"},{"name":"prostate gland lymphoma","type":"exact"},{"name":"prostate lymphoma","type":"exact"}],"termid":"MONDO:0000996","xrefs":{"Monarch":{"xref_id":"0000996"}}}


id: PBO:0075431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPANX family member A2","termid":"PBO:0075431"}


id: PBO:0036492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein, flocculin Pfl5","termid":"PBO:0036492"}


id: GO:0016881
data:
  {"annotated_genes":["SJAG_04031","SJAG_00988","SJAG_00529","SJAG_03679","SJAG_02364","SJAG_03224","SJAG_01897","SJAG_01139","SJAG_01351"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95917],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097429"},{"annotations":[81089],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008841"},{"annotations":[79180],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004357"},{"annotations":[72203],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004363"},{"annotations":[74108],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004592"},{"annotations":[80427],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004632"},{"annotations":[78502],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004639"},{"annotations":[81090,73951],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004326"},{"annotations":[90057],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004835"}]},"cv_name":"molecular_function","definition":"Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.","definition_xrefs":["GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00529":null,"SJAG_00988":null,"SJAG_01139":null,"SJAG_01351":null,"SJAG_01897":null,"SJAG_02364":null,"SJAG_03224":null,"SJAG_03679":null,"SJAG_04031":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"acid-amino acid ligase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:6.3.2.-"],"synonyms":[{"name":"peptide synthase activity","type":"exact"}],"termid":"GO:0016881","terms_by_termid":{"GO:0004326":null,"GO:0004357":null,"GO:0004363":null,"GO:0004592":null,"GO:0004632":null,"GO:0004639":null,"GO:0004835":null,"GO:0008841":null,"GO:0097429":null}}


id: MONDO:0020556
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A pleuropulmonary blastoma composed of malignant small cells and characterized by the presence of a sarcomatous component. It usually follows an aggressive clinical course.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pleuropulmonary blastoma","termid":"MONDO:0011014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pleuropulmonary blastoma type 2","secondary_identifiers":["UMLS:C1710500","MEDGEN:328133","ICD9:162.9","GARD:19716","Orphanet:99934","SCTID:707672001","NCIT:C45627"],"synonyms":[{"name":"type II pleuropulmonary blastoma","type":"exact"}],"termid":"MONDO:0020556","xrefs":{"Monarch":{"xref_id":"0020556"}}}


id: PBO:0027919
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_papuamide_B_during_vegetative_growth","termid":"PBO:0027919"}


id: GO:0002877
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of an acute inflammatory response to a non-antigenic stimulus.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of acute inflammatory response","termid":"GO:0002673"},{"relation_name":"regulates","term_name":"acute inflammatory response to non-antigenic stimulus","termid":"GO:0002525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of acute inflammatory response to non-antigenic stimulus","termid":"GO:0002877"}


id: PBO:0083250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching","termid":"PBO:0083250"}


id: MONDO:1010746
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Ehlers-Danlos syndrome in dogs in which the cause of the disease is a mutation in the ADAMTS2 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome, dog","termid":"MONDO:1011493"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ehlers-Danlos syndrome, dermatosparaxis type, ADAMTS2-related, dog","secondary_identifiers":["OMIA:000328-9615"],"synonyms":[{"name":"dEDS","type":"exact"}],"termid":"MONDO:1010746","xrefs":{"Monarch":{"xref_id":"1010746"}}}


id: SO:0000833
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"},{"relation_name":"part_of","term_name":"transcript","termid":"SO:0000673"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcript_region","synonyms":[{"name":"transcript region","type":"exact"}],"termid":"SO:0000833"}


id: GO:0060054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of epithelial cell proliferation, contributing to the restoration of integrity to a damaged tissue following an injury.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell proliferation","termid":"GO:0050679"},{"relation_name":"part_of","term_name":"wound healing","termid":"GO:0042060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of epithelial cell proliferation involved in wound healing","termid":"GO:0060054"}


id: GO:0070746
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to interleukin-35.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine binding","termid":"GO:0019955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"interleukin-35 binding","synonyms":[{"name":"IL-35 binding","type":"exact"}],"termid":"GO:0070746"}


id: GO:0061100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a neuroendocrine cell of the lung epithelium.","definition_xrefs":["PMID:9126746","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroendocrine cell differentiation","termid":"GO:0061101"},{"relation_name":"is_a","term_name":"lung secretory cell differentiation","termid":"GO:0061140"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung neuroendocrine cell differentiation","termid":"GO:0061100"}


id: PBO:0077821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TP53 target 1","termid":"PBO:0077821"}


id: PBO:0053866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1141","termid":"PBO:0053866"}


id: MONDO:0002435
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm involving a oculomotor nerve.","definition_xrefs":["MONDO:patterns/neoplasm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve neoplasm","termid":"MONDO:0002633"},{"relation_name":"is_a","term_name":"third cranial nerve disorder","termid":"MONDO:0003546"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oculomotor nerve neoplasm","secondary_identifiers":["DOID:2817","NCIT:C6994","SCTID:126969002","UMLS:C1263895","MEDGEN:220391","ICD9:239.7"],"synonyms":[{"name":"IIIrd cranial nerve tumor","type":"exact"},{"name":"IIIrd cranial nerve tumour","type":"exact"},{"name":"cranial nerve III tumor","type":"related"},{"name":"cranial nerve III tumour","type":"related"},{"name":"neoplasm of oculomotor nerve","type":"exact"},{"name":"oculomotor nerve neoplasm","type":"exact"},{"name":"oculomotor nerve neoplasm (disease)","type":"exact"},{"name":"oculomotor nerve tumor","type":"exact"},{"name":"oculomotor nerve tumour","type":"exact"},{"name":"tumor of oculomotor nerve","type":"exact"},{"name":"tumour of oculomotor nerve","type":"exact"}],"termid":"MONDO:0002435","xrefs":{"Monarch":{"xref_id":"0002435"}}}


id: PBO:0039271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldolase, fructose-bisphosphate C","termid":"PBO:0039271"}


id: PBO:0069431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 696, pseudogene","termid":"PBO:0069431"}


id: CHEBI:48828
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cobalt(2+)","termid":"CHEBI:48828"}


id: MONDO:0000145
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete premature aging syndrome (obsolete MONDO:0000145)","termid":"MONDO:0000145","xrefs":{"Monarch":{"xref_id":"0000145"}}}


id: PBO:0044984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DHX35 divergent transcript","termid":"PBO:0044984"}


id: PBO:0061129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMBR antisense RNA 1","termid":"PBO:0061129"}


id: MONDO:0019988
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pauci-immune glomerulonephritis (GN) with antineutrophil cytoplasmic antibodies (ANCA) is a form of rapidly progressive GN comprising about 90% of pauci-immune glomerulonephritis, and associated with the presence of circulating ANCA (mostly directed against proteinase-3 (PR3) and myeloperoxidase (MPO)). Patients usually present with hematuria and rapidly declining renal function, often leading to dialysis within weeks without treatment. Cutaneous, pulmonary, musculoskeletal and nervous involvement may be observed in case of systemic disease, and the correlation between ANCA titer and disease activity has been demonstrated.","definition_xrefs":["Orphanet:97563"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Pauci-immune glomerulonephritis","termid":"MONDO:0019641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"pauci-immune glomerulonephritis with ANCA","secondary_identifiers":["GARD:19379","MEDGEN:1843351","UMLS:C5680254"],"synonyms":[{"name":"pauci-immune glomerulonephritis with antineutrophil cytoplasmic antibody","type":"exact"}],"termid":"MONDO:0019988","xrefs":{"Monarch":{"xref_id":"0019988"}}}


id: FYECO:0000128
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Any experimental condition where the pH of the medium or assay buffer is significantly different than the standard pombe growth medium with a pH of ~5.6.","definition_xrefs":["PMID:10467002"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000128 pH (obsolete FYECO:0000128)","termid":"FYECO:0000128"}


id: MONDO:0015662
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hemorrhagic disorder due to an acquired coagulation factor defect (obsolete MONDO:0015662)","secondary_identifiers":["Orphanet:166775"],"synonyms":[{"name":"rare bleeding disorder due to an acquired coagulation factor defect","type":"exact"},{"name":"rare coagulopathy due to an acquired coagulation factor defect","type":"exact"}],"termid":"MONDO:0015662","xrefs":{"Monarch":{"xref_id":"0015662"}}}


id: PBO:0054847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2261","termid":"PBO:0054847"}


id: GO:0033778
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 7alpha-hydroxycholest-4-en-3-one + H+ + NADPH + O2 = 7alpha,12alpha-dihydroxycholest-4-en-3-one + H2O + NADP+.","definition_xrefs":["PMID:10051404","PMID:1400444"],"gene_count":0,"genotype_count":0,"name":"obsolete 7-alpha-hydroxycholest-4-en-3-one 12-alpha-hydroxylase activity (obsolete GO:0033778)","termid":"GO:0033778"}


id: PBO:0078365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon TTC) 9-1","termid":"PBO:0078365"}


id: PBO:0043655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPI coat complex subunit zeta 1","termid":"PBO:0043655"}


id: GO:0060950
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a glial cell of the heart.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell differentiation","termid":"GO:0010001"},{"relation_name":"is_a","term_name":"cardiocyte differentiation","termid":"GO:0035051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac glial cell differentiation","termid":"GO:0060950"}


id: PBO:0053689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 882","termid":"PBO:0053689"}


id: GO:2001312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a lysobisphosphatidic acid. A lysobisphosphatidic acid is a lysophosphatidic acid having the unusual property of a phosphodiester moiety linked to positions sn-1 and sn1' of glycerol; and two additional fatty acids esterified to the glycerol head group.","definition_xrefs":["GOC:mw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerophospholipid biosynthetic process","termid":"GO:0046474"},{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"},{"relation_name":"is_a","term_name":"lysobisphosphatidic acid metabolic process","termid":"GO:2001311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"lysobisphosphatidic acid biosynthetic process","secondary_identifiers":["Reactome:R-HSA-1483171"],"synonyms":[{"name":"LBPA anabolism","type":"exact"},{"name":"LBPA biosynthesis","type":"exact"},{"name":"LBPA biosynthetic process","type":"exact"},{"name":"LBPA formation","type":"exact"},{"name":"LBPA synthesis","type":"exact"},{"name":"bis(monoacylglycerol) hydrogen phosphate (BMP) anabolism","type":"exact"},{"name":"bis(monoacylglycerol) hydrogen phosphate (BMP) biosynthesis","type":"exact"},{"name":"bis(monoacylglycerol) hydrogen phosphate (BMP) biosynthetic process","type":"exact"},{"name":"bis(monoacylglycerol) hydrogen phosphate (BMP) formation","type":"exact"},{"name":"bis(monoacylglycerol) hydrogen phosphate (BMP) synthesis","type":"exact"},{"name":"bis(monoacylglycerol) hydrogen phosphate anabolism","type":"exact"},{"name":"bis(monoacylglycerol) hydrogen phosphate biosynthesis","type":"exact"},{"name":"bis(monoacylglycerol) hydrogen phosphate biosynthetic process","type":"exact"},{"name":"bis(monoacylglycerol) hydrogen phosphate formation","type":"exact"},{"name":"bis(monoacylglycerol) hydrogen phosphate synthesis","type":"exact"},{"name":"lysobisphosphatidic acid anabolism","type":"exact"},{"name":"lysobisphosphatidic acid biosynthesis","type":"exact"},{"name":"lysobisphosphatidic acid formation","type":"exact"},{"name":"lysobisphosphatidic acid synthesis","type":"exact"}],"termid":"GO:2001312"}


id: PBO:0071462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 3","termid":"PBO:0071462"}


id: GO:0038088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by vascular endothelial growth factor (VEGF) binding to a beta-type platelet-derived growth factor receptor (PDGFR) on the surface of a cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","PMID:17470632"],"direct_ancestors":[{"relation_name":"is_a","term_name":"platelet-derived growth factor receptor-beta signaling pathway","termid":"GO:0035791"},{"relation_name":"is_a","term_name":"VEGF-activated platelet-derived growth factor receptor signaling pathway","termid":"GO:0038086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"VEGF-activated platelet-derived growth factor receptor-beta signaling pathway","synonyms":[{"name":"VEGF-A/PDGFRbeta signaling","type":"narrow"},{"name":"VEGF-activated PDGFRbeta signalling pathway","type":"exact"},{"name":"VEGF-activated platelet-derived growth factor receptor-beta signalling pathway","type":"exact"},{"name":"VEGF/PDGFRbeta signaling pathway","type":"exact"},{"name":"vascular endothelial growth factor-activated platelet-derived growth factor receptor-beta signaling pathway","type":"exact"}],"termid":"GO:0038088"}


id: PBO:0048523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GDP-D-glucose phosphorylase 1","termid":"PBO:0048523"}


id: PBO:0089966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated phospholipid scramblase Atg9","termid":"PBO:0089966"}


id: MOD:00261
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-tyrosine residue and 5'-phosphouridine through a phosphodiester bond to form O4'-(phospho-5'-uridine)-L-tyrosine.","definition_xrefs":["PubMed:2885322","PubMed:11467524","RESID:AA0256","Unimod:417#Y","DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"uridylated residue","termid":"MOD:01166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O4'-(phospho-5'-uridine)-L-tyrosine","synonyms":[{"name":"(S)-2-amino-3-[4-(5'-uridine phosphonoxy)phenyl]propanoic acid","type":"exact"},{"name":"5'-uridylic-O-tyrosine","type":"exact"},{"name":"MOD_RES O-UMP-tyrosine","type":"exact"},{"name":"O-Uridinylylation (of Tyrosine)","type":"exact"},{"name":"O4'-(phospho-5'-uridine)-L-tyrosine","type":"exact"},{"name":"O4'-L-tyrosine 5'-uridine phosphodiester","type":"exact"},{"name":"OUMPTyr","type":"exact"},{"name":"PhosphoUridine","type":"related"},{"name":"hydrogen 5'-uridylate tyrosine ester","type":"exact"},{"name":"uridine phosphodiester","type":"related"}],"termid":"MOD:00261"}


id: GO:1902039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of seed dormancy process.","definition_xrefs":["GOC:TermGenie","PMID:23378449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of seed dormancy process","termid":"GO:2000033"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"seed dormancy process","termid":"GO:0010162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of seed dormancy process","synonyms":[{"name":"down regulation of seed dormancy","type":"related"},{"name":"down regulation of seed dormancy process","type":"exact"},{"name":"down-regulation of seed dormancy","type":"related"},{"name":"down-regulation of seed dormancy process","type":"exact"},{"name":"downregulation of seed dormancy","type":"related"},{"name":"downregulation of seed dormancy process","type":"exact"},{"name":"inhibition of seed dormancy","type":"related"},{"name":"inhibition of seed dormancy process","type":"narrow"},{"name":"negative regulation of seed dormancy","type":"related"}],"termid":"GO:1902039"}


id: GO:0061547
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + (1,4)-alpha-D-glucosyl(n) = UMP + (1,4)-alpha-D-glucosyl(n)-glucose-1-phosphate.","definition_xrefs":["GOC:dph","PMID:21356517"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring phosphorus-containing groups","termid":"GO:0016772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"glycogen synthase activity, transferring glucose-1-phosphate","secondary_identifiers":["Reactome:R-HSA-3780994","Reactome:R-HSA-3781024"],"termid":"GO:0061547"}


id: PBO:0034759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex subunit Ngg1/Ada3","termid":"PBO:0034759"}


id: PBO:0082834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Constituent of 66S pre-ribosomal particles; has similarity to human translation initiation factor 6 (eIF6); may be involved in the biogenesis and or stability of 60S ribosomal subunits","termid":"PBO:0082834"}


id: GO:0015408
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Fe3+(out) = ADP + phosphate + Fe3+(in).","definition_xrefs":["RHEA:12332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ferric iron transmembrane transporter activity","termid":"GO:0015091"},{"relation_name":"is_a","term_name":"ATPase-coupled monoatomic cation transmembrane transporter activity","termid":"GO:0019829"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"ABC-type ferric iron transporter activity","secondary_identifiers":["EC:7.2.2.7","MetaCyc:3.6.3.30-RXN"],"synonyms":[{"name":"ABC-type Fe3+ transporter","type":"exact"},{"name":"ATPase-coupled ferric iron transmembrane transporter activity","type":"related"},{"name":"Fe3+-transporting ATPase activity","type":"related"},{"name":"ferric ABC transporter","type":"exact"},{"name":"ferric transporting ATPase activity","type":"related"},{"name":"ferric-transporting ATPase activity","type":"related"}],"termid":"GO:0015408"}


id: GO:0004721
data:
  {"annotated_genes":["SJAG_03263","SJAG_01286","SJAG_04262","SJAG_00600","SJAG_01161","SJAG_00214","SJAG_01187","SJAG_01790","SJAG_01906","SJAG_04332","SJAG_00823","SJAG_04128","SJAG_02536","SJAG_04426","SJAG_02203","SJAG_03624","SJAG_02389","SJAG_03185","SJAG_02433","SJAG_01667","SJAG_04166","SJAG_02013","SJAG_03893","SJAG_01672","SJAG_03310","SJAG_03631","SJAG_02854","SJAG_00082","SJAG_03126","SJAG_02000","SJAG_03482"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73617,75098],"is_not":false,"summary":null,"term":"GO:0004721"},{"annotations":[77897],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004741"},{"annotations":[81304],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033192"},{"annotations":[99443],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033549"},{"annotations":[118947,97791],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990439"},{"annotations":[93483,96853,72821],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033550"},{"annotations":[72816],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017017"},{"annotations":[63848],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004726"},{"annotations":[76349,76626,64662,62583,81013,81263,75280,74705,75859,74570,75895,74681],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004722"},{"annotations":[75218,114212,74571,73723,107050],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004725"},{"annotations":[72817],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008330"},{"annotations":[68677,81597],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008420"},{"annotations":[97655,99004],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180007"},{"annotations":[113823],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180005"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cellular proteins and thereby provide an important mechanism for regulating cellular activity.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00214":null,"SJAG_00600":null,"SJAG_00823":null,"SJAG_01161":null,"SJAG_01187":null,"SJAG_01286":null,"SJAG_01667":null,"SJAG_01672":null,"SJAG_01790":null,"SJAG_01906":null,"SJAG_02000":null,"SJAG_02013":null,"SJAG_02203":null,"SJAG_02389":null,"SJAG_02433":null,"SJAG_02536":null,"SJAG_02854":null,"SJAG_03126":null,"SJAG_03185":null,"SJAG_03263":null,"SJAG_03310":null,"SJAG_03482":null,"SJAG_03624":null,"SJAG_03631":null,"SJAG_03893":null,"SJAG_04128":null,"SJAG_04166":null,"SJAG_04262":null,"SJAG_04332":null,"SJAG_04426":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0140096","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"phosphoprotein phosphatase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-69199","Reactome:R-HSA-9636684","Reactome:R-HSA-113503","Reactome:R-HSA-167072","Reactome:R-HSA-1363276","Reactome:R-HSA-174124","Reactome:R-HSA-178178","Reactome:R-HSA-112383","Reactome:R-HSA-1363274","Reactome:R-HSA-170158","Reactome:R-HSA-170153","Reactome:R-HSA-170161","Reactome:R-HSA-2529015","Reactome:R-HSA-174110"],"synonyms":[{"name":"phosphoprotein phosphohydrolase activity","type":"exact"},{"name":"protein phosphatase activity","type":"exact"},{"name":"protein phosphatase-1 activity","type":"narrow"},{"name":"protein phosphatase-2A activity","type":"narrow"},{"name":"protein phosphatase-2B activity","type":"narrow"},{"name":"protein phosphatase-2C activity","type":"narrow"}],"termid":"GO:0004721","terms_by_termid":{"GO:0004721":null,"GO:0004722":null,"GO:0004725":null,"GO:0004726":null,"GO:0004741":null,"GO:0008330":null,"GO:0008420":null,"GO:0017017":null,"GO:0033192":null,"GO:0033549":null,"GO:0033550":null,"GO:0180005":null,"GO:0180007":null,"GO:1990439":null}}


id: MONDO:0013082
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic, developmental defect during embryogenesis syndrome characterized by total or partial colonic aganglionosis associated with peripheral, usually multifocal, neuroblastic tumors (ganglioneuroblastoma, neuroblastoma, ganglioneuroma). Congenital central hypoventilation syndrome, with variable severity of respiratory compromise, cardiovascular and ophthalmologic symptoms, consistent with autonomic nervous system dysfunction, is occasionally associated.","definition_xrefs":["Orphanet:2151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"intestinal motility disease","termid":"MONDO:0021189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"Hirschsprung disease-ganglioneuroblastoma syndrome","secondary_identifiers":["GARD:2695","MESH:C538119","UMLS:C5191058","MEDGEN:1683967"],"synonyms":[{"name":"Hirschsprung disease ganglioneuroblastoma","type":"related"},{"name":"neuroblastoma with Hirschsprung disease","type":"related"}],"termid":"MONDO:0013082","xrefs":{"Monarch":{"xref_id":"0013082"}}}


id: PBO:0082332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase subunit of imitation-switch (ISWI) class chromatin remodelers; with Ioc3p forms Isw1a complex involved in repression of transcription initiation; with Ioc2p and Ioc4p forms Isw1b complex involved in regulation of transcription elongation; Isw1b recruited to ORFs by H3K36 methylation and acts with Chd1p to prevent trans-histone exchange over coding regions; Isw1p import into nucleus depends on C-terminal bipartite nuclear targeting signal KRIR X19 KKAK","termid":"PBO:0082332"}


id: FYPO:0001076
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of a specific substance measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell phenotype","termid":"FYPO:0000002"},{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal level of substance in cell","termid":"FYPO:0001076"}


id: MONDO:0020253
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndrome with a symptomatic strabismus (obsolete MONDO:0020253)","secondary_identifiers":["Orphanet:98683"],"termid":"MONDO:0020253","xrefs":{"Monarch":{"xref_id":"0020253"}}}


id: GO:0031839
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1 neuromedin U receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromedin U receptor binding","termid":"GO:0042922"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"type 1 neuromedin U receptor binding","synonyms":[{"name":"type 1 neuromedin U receptor ligand","type":"narrow"}],"termid":"GO:0031839"}


id: PBO:0063260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin beta 6","termid":"PBO:0063260"}


id: PBO:0063270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin beta 16","termid":"PBO:0063270"}


id: PBO:0073182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenoprotein M","termid":"PBO:0073182"}


id: GO:0097302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways by which diacylglyceryl transfer leads to formation of a water-soluble protein-lipid complex.","definition_xrefs":["GOC:pde","GOC:yaf","UniPathway:UPA00664"],"gene_count":0,"genotype_count":0,"name":"obsolete lipoprotein biosynthetic process via diacylglyceryl transfer (obsolete GO:0097302)","synonyms":[{"name":"lipoprotein biosynthesis (diacylglyceryl transfer)","type":"exact"}],"termid":"GO:0097302"}


id: PBO:0040996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bolA family member 3 pseudogene 1","termid":"PBO:0040996"}


id: PBO:0036535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron hydrogenase Nar1 (predicted)","termid":"PBO:0036535"}


id: MONDO:0004521
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An epithelioid sarcoma occurring in adults.","definition_xrefs":["NCIT:C7944"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelioid sarcoma","termid":"MONDO:0017387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adult epithelioid sarcoma","secondary_identifiers":["DOID:8282","MEDGEN:124631","UMLS:C0279545"],"synonyms":[{"name":"adult epithelioid sarcoma","type":"exact"},{"name":"epithelioid sarcoma","type":"broad"},{"name":"epithelioid sarcoma of adults","type":"exact"}],"termid":"MONDO:0004521","xrefs":{"Monarch":{"xref_id":"0004521"}}}


id: GO:0005960
data:
  {"annotated_genes":["SJAG_02901","SJAG_03861","SJAG_03290","SJAG_03641"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[57985,75915,79793,89228],"is_not":false,"summary":null,"term":"GO:0005960"}]},"cv_name":"cellular_component","definition":"A protein complex that catalyzes the reversible oxidation of glycine. In E. coli, it has four components: dihydrolipoamide dehydrogenase, glycine dehydrogenase (decarboxylating), lipoyl-GcvH-protein and aminomethyltransferase, also known as L, P, H, and T.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"},{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02901":null,"SJAG_03290":null,"SJAG_03641":null,"SJAG_03861":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"glycine cleavage complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0070015","Wikipedia:Glycine_decarboxylase_complex","GO:0005961"],"synonyms":[{"name":"glycine cleavage system","type":"exact"},{"name":"glycine decarboxylase complex","type":"exact"},{"name":"glycine dehydrogenase (decarboxylating) complex","type":"exact"},{"name":"glycine dehydrogenase complex (decarboxylating)","type":"related"},{"name":"glycine synthase complex","type":"exact"}],"termid":"GO:0005960","terms_by_termid":{"GO:0005960":null}}


id: PBO:0078825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Pro (anticodon AGG) 2-8","termid":"PBO:0078825"}


id: PR:Q9P7V3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A translin that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10741:SF2","PRO:DNx","OMA:SCHPO01818"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translin-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC30.03c","secondary_identifiers":["UniProtKB:Q9P7V3"],"synonyms":[{"name":"Spom972h-TSN","type":"exact"},{"name":"meiotically up-regulated gene 90 protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"translin homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7V3"}


id: MONDO:0054727
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 23","secondary_identifiers":["GARD:16246","UMLS:C4540185","MEDGEN:1626589","DOID:0070181","OMIM:617707"],"synonyms":[{"name":"SPGF23","type":"related"},{"name":"spermatogenic failure 23","type":"exact"}],"termid":"MONDO:0054727","xrefs":{"Monarch":{"xref_id":"0054727"}}}


id: PBO:0003353
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.2.22","termid":"PBO:0003353"}


id: PBO:0027550
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_telomere","termid":"PBO:0027550"}


id: PBO:0078479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon AAT) 3-1","termid":"PBO:0078479"}


id: PBO:0063147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAT1 homolog 1, processing body mRNA decay factor","termid":"PBO:0063147"}


id: PBO:0079063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon TAC) 3-1","termid":"PBO:0079063"}


id: MONDO:0008600
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A painful disability in the hand affecting the finger or thumb. It is caused by mechanical impingement of the digital flexor tendons as they pass through a narrowed retinacular pulley at the level of the metacarpal head. Thickening of the sheath and fibrocartilaginous metaplasia can occur, and nodules can form. (From Green's Operative Hand Surgery, 5th ed, p2137-58).","definition_xrefs":["MESH:D052582"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trigger thumb","secondary_identifiers":["ICD10CM:M65.31","OMIM:190410","SCTID:42786005","UMLS:C0410060","MEDGEN:98044"],"synonyms":[{"name":"bilateral trigger thumb (type)","type":"related"},{"name":"congenital trigger thumb (type)","type":"related"},{"name":"recurrent trigger thumb (type)","type":"related"},{"name":"trigger thumb","type":"exact"}],"termid":"MONDO:0008600","xrefs":{"Monarch":{"xref_id":"0008600"}}}


id: MONDO:0001515
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"corneal disorder","termid":"MONDO:0000942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"corneal degeneration","secondary_identifiers":["MEDGEN:56352","ICD10CM:H18.4","ICD9:371.40","ICD9:371.49","UMLS:C0155118","icd11.foundation:699504167","ICD9:371.4","SCTID:111521006","DOID:1237"],"termid":"MONDO:0001515","xrefs":{"Monarch":{"xref_id":"0001515"}}}


id: MONDO:0024535
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any singleton-Merten dysplasia in which the cause of the disease is a mutation in the IFIH1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Singleton-Merten dysplasia","termid":"MONDO:0008429"},{"relation_name":"is_a","term_name":"IFIH1-related type 1 interferonopathy","termid":"MONDO:0700262"},{"relation_name":"is_a","term_name":"osteogenesis imperfecta and a reduction of bone mineral density.","termid":"MONDO:0800064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Singleton-Merten syndrome 1","secondary_identifiers":["OMIM:182250","UMLS:C4225427","MEDGEN:899946"],"synonyms":[{"name":"IFIH1 singleton-Merten dysplasia","type":"exact"},{"name":"SGMRT1","type":"related"},{"name":"singleton-Merten dysplasia caused by mutation in IFIH1","type":"exact"},{"name":"singleton-Merten syndrome 1","type":"related"}],"termid":"MONDO:0024535","xrefs":{"Monarch":{"xref_id":"0024535"}}}


id: PBO:0029859
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_swollen_vegetative_cell_population_(obsolete_FYPO:0002378)","termid":"PBO:0029859"}


id: PBO:0034344
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-only_in_taxon","termid":"PBO:0034344"}


id: PBO:0045890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 gamma pseudogene 2","termid":"PBO:0045890"}


id: GO:0090497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a mesenchymal cell from one site to another, often during the development of a multicellular organism.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ameboidal-type cell migration","termid":"GO:0001667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal cell migration","termid":"GO:0090497"}


id: PR:O13339-2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A telomerase reverse transcriptase (Schizosaccharomyces pombe 972h-) that is a translation product of some mRNA giving rise to a protein with the amino acid sequence represented by UniProtKB:O13339-2.","definition_xrefs":["UniProtKB:O13339","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomerase reverse transcriptase (Schizosaccharomyces pombe 972h-)","termid":"PR:O13339"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomerase reverse transcriptase isoform 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.01","secondary_identifiers":["UniProtKB:O13339-2"],"synonyms":[{"name":"Spom972h-TERT/iso:2","type":"exact"}],"termid":"PR:O13339-2"}


id: PBO:0046112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4E family member 3","termid":"PBO:0046112"}


id: PBO:0066891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 191","termid":"PBO:0066891"}


id: PBO:0030546
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_cellular_cAMP_level","termid":"PBO:0030546"}


id: GO:0047684
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + an arylamine = UDP + an N-D-glucosylarylamine.","definition_xrefs":["EC:2.4.1.71","MetaCyc:ARYLAMINE-GLUCOSYLTRANSFERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"arylamine glucosyltransferase activity","synonyms":[{"name":"UDP glucose-arylamine glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:arylamine N-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:arylamine N-D-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-arylamine glucosyltransferase activity","type":"related"}],"termid":"GO:0047684"}


id: PBO:0027772
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_tingenone","termid":"PBO:0027772"}


id: PBO:0042689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cat eye syndrome chromosome region, candidate 3","termid":"PBO:0042689"}


id: PBO:0116267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase, also known as pontin; conserved component of multiple complexes including the INO80 complex, the Swr1 complex, the R2TP complex (Rvb1-Rvb2-Tah1-Pih1), and the TTT Hsp90 cochaperone complex that is involved in chromatin remodeling and telomeric chromatin regulation; involved in multiple processes such as chromatin remodeling, box C/D snoRNP assembly, and RNA polymerase II assembly; member of the AAA+ and RuvB-like protein families, similar to Rvb2p","termid":"PBO:0116267"}


id: PBO:0013048
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA Break Localizing","termid":"PBO:0013048"}


id: GO:0019344
data:
  {"annotated_genes":["SJAG_01880","SJAG_02972","SJAG_00582","SJAG_04305"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112357],"is_not":false,"summary":null,"term":"GO:0019344"},{"annotations":[67709,61037,77892],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006535"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cysteine, 2-amino-3-mercaptopropanoic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur amino acid biosynthetic process","termid":"GO:0000097"},{"relation_name":"is_a","term_name":"cysteine metabolic process","termid":"GO:0006534"},{"relation_name":"is_a","term_name":"serine family amino acid biosynthetic process","termid":"GO:0009070"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00582":null,"SJAG_01880":null,"SJAG_02972":null,"SJAG_04305":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"cysteine biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cysteine anabolism","type":"exact"},{"name":"cysteine biosynthesis","type":"exact"},{"name":"cysteine formation","type":"exact"},{"name":"cysteine synthesis","type":"exact"}],"termid":"GO:0019344","terms_by_termid":{"GO:0006535":null,"GO:0019344":null}}


id: PBO:0089299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shelterin complex subunit Poz1","termid":"PBO:0089299"}


id: MONDO:0003721
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An osteosarcoma arising from the kidney.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extraosseous osteosarcoma","termid":"MONDO:0002621"},{"relation_name":"is_a","term_name":"kidney sarcoma","termid":"MONDO:0002930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005240"],"is_obsolete":false,"name":"kidney osteogenic sarcoma","secondary_identifiers":["DOID:5983","NCIT:C6181","UMLS:C1335747","MEDGEN:235547"],"synonyms":[{"name":"kidney extraskeletal osteosarcoma","type":"exact"},{"name":"kidney osteogenic sarcoma","type":"exact"},{"name":"kidney osteosarcoma","type":"exact"},{"name":"kidney osteosarcoma (disease)","type":"exact"},{"name":"osteogenic sarcoma of kidney","type":"exact"},{"name":"osteogenic sarcoma of the kidney","type":"exact"},{"name":"osteosarcoma of kidney","type":"exact"},{"name":"osteosarcoma of the kidney","type":"exact"},{"name":"renal extraskeletal osteosarcoma","type":"exact"},{"name":"renal osteogenic sarcoma","type":"exact"},{"name":"renal osteosarcoma","type":"exact"}],"termid":"MONDO:0003721","xrefs":{"Monarch":{"xref_id":"0003721"}}}


id: PBO:0002779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S18 (predicted)","termid":"PBO:0002779"}


id: MONDO:0012510
data:
  {"annotated_genes":["SJAG_02324"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87765],"is_not":false,"summary":null,"term":"MONDO:0012510"}]},"cv_name":"mondo","definition":"Combined oxidative phosphorylation defect type 2 is a rare mitochondrial disorder due to a defect in mitochondrial protein synthesis characterized by severe intrauterine growth retardation, neonatal limb edema and redundant skin on the neck (hydrops), developmental brain defects (corpus callosum agenesis, ventriculomegaly), brachydactyly, dysmorphic facial features with low set ears, severe intractable neonatal lactic acidosis with lethargy, hypotonia, absent spontaneous movements and fatal outcome. Markedly decreased activity of complex I, II + III and IV in muscle and liver have been determined.","definition_xrefs":["Orphanet:254920"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02324":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"combined oxidative phosphorylation defect type 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C566468","SCTID:764943000","UMLS:C1864843","MEDGEN:400626","OMIM:610498","DOID:0111483","GARD:17232"],"synonyms":[{"name":"COXPD2","type":"exact"},{"name":"MRPS16 combined oxidative phosphorylation deficiency","type":"exact"},{"name":"combined oxidative phosphorylation deficiency 2","type":"related"},{"name":"combined oxidative phosphorylation deficiency caused by mutation in MRPS16","type":"exact"},{"name":"combined oxidative phosphorylation deficiency type 2","type":"exact"},{"name":"corpus callosum, agenesis of, with Dysmorphism and fatal lactic acidosis","type":"related"}],"termid":"MONDO:0012510","terms_by_termid":{"MONDO:0012510":null},"xrefs":{"Monarch":{"xref_id":"0012510"}}}


id: PBO:0042503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin related 23","termid":"PBO:0042503"}


id: GO:0060870
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular process that results in the breakdown of the cell wall that contributes to the process of floral organ abscission.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall modification involved in abscission","termid":"GO:0009830"},{"relation_name":"part_of","term_name":"floral organ abscission","termid":"GO:0010227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0071554","GO:0008150"],"is_obsolete":false,"name":"cell wall disassembly involved in floral organ abscission","termid":"GO:0060870"}


id: MONDO:0000508
data:
  {"annotated_genes":["SJAG_03681","SJAG_01581","SJAG_02371","SJAG_04235","SJAG_02774","SJAG_03286","SJAG_00293","SJAG_05313","SJAG_05239","SJAG_03353","SJAG_00992","SJAG_02523","SJAG_00156","SJAG_04980","SJAG_00466","SJAG_01540","SJAG_01047","SJAG_03900","SJAG_02855","SJAG_01448","SJAG_04631","SJAG_03635","SJAG_01926","SJAG_00379","SJAG_01465","SJAG_02629","SJAG_02165","SJAG_04755","SJAG_04056","SJAG_02286","SJAG_04176","SJAG_03664"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87216],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014558"},{"annotations":[88725],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010477"},{"annotations":[87604],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013644"},{"annotations":[88704],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010441"},{"annotations":[87664],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010561"},{"annotations":[88057],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010333"},{"annotations":[87706],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013578"},{"annotations":[88945],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010590"},{"annotations":[87058,87059],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014602"},{"annotations":[88661],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015022"},{"annotations":[88501],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044319"},{"annotations":[88240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013805"},{"annotations":[87387],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014832"},{"annotations":[86860],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010407"},{"annotations":[87096],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010500"},{"annotations":[87084],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030908"},{"annotations":[87705],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030909"},{"annotations":[88020,88021],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011053"},{"annotations":[88263],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010258"},{"annotations":[87740],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010671"},{"annotations":[88691],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010457"},{"annotations":[87324],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011213"},{"annotations":[89036],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010398"},{"annotations":[88681],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010574"},{"annotations":[88868,88867,88869],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010355"},{"annotations":[88695],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010461"},{"annotations":[88465],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010286"},{"annotations":[86850],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010665"},{"annotations":[86819],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010655"},{"annotations":[87932],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010306"},{"annotations":[87700],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015601"},{"annotations":[87090],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010496"}]},"cv_name":"mondo","definition":"A intellectual disability that is part of a larger syndrome.","definition_xrefs":["MONDO:patterns/syndromic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intellectual disability","termid":"MONDO:0001071"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":32,"genes_by_uniquename":{"SJAG_00156":null,"SJAG_00293":null,"SJAG_00379":null,"SJAG_00466":null,"SJAG_00992":null,"SJAG_01047":null,"SJAG_01448":null,"SJAG_01465":null,"SJAG_01540":null,"SJAG_01581":null,"SJAG_01926":null,"SJAG_02165":null,"SJAG_02286":null,"SJAG_02371":null,"SJAG_02523":null,"SJAG_02629":null,"SJAG_02774":null,"SJAG_02855":null,"SJAG_03286":null,"SJAG_03353":null,"SJAG_03635":null,"SJAG_03664":null,"SJAG_03681":null,"SJAG_03900":null,"SJAG_04056":null,"SJAG_04176":null,"SJAG_04235":null,"SJAG_04631":null,"SJAG_04755":null,"SJAG_04980":null,"SJAG_05239":null,"SJAG_05313":null},"genotype_count":0,"is_obsolete":false,"name":"syndromic intellectual disability","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5680525","DOID:0050888","MEDGEN:1842178"],"synonyms":[{"name":"syndrome associated with intellectual disability","type":"exact"},{"name":"syndromic intellectual disability","type":"exact"}],"termid":"MONDO:0000508","terms_by_termid":{"MONDO:0010258":null,"MONDO:0010286":null,"MONDO:0010306":null,"MONDO:0010333":null,"MONDO:0010355":null,"MONDO:0010398":null,"MONDO:0010407":null,"MONDO:0010441":null,"MONDO:0010457":null,"MONDO:0010461":null,"MONDO:0010477":null,"MONDO:0010496":null,"MONDO:0010500":null,"MONDO:0010561":null,"MONDO:0010574":null,"MONDO:0010590":null,"MONDO:0010655":null,"MONDO:0010665":null,"MONDO:0010671":null,"MONDO:0011053":null,"MONDO:0011213":null,"MONDO:0013578":null,"MONDO:0013644":null,"MONDO:0013805":null,"MONDO:0014558":null,"MONDO:0014602":null,"MONDO:0014832":null,"MONDO:0015022":null,"MONDO:0015601":null,"MONDO:0030908":null,"MONDO:0030909":null,"MONDO:0044319":null},"xrefs":{"Monarch":{"xref_id":"0000508"}}}


id: FYPO:0006637
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell cortex of one or both cell tips is decreased, and an increased amount of the protein is instead detected distributed throughout the cell cortex.","definition_xrefs":["PomBase:mah","PMID:29930085"],"direct_ancestors":[{"relation_name":"has_part","term_name":"mislocalized protein distributed in cell cortex","termid":"FYPO:0006636"},{"relation_name":"is_a","term_name":"mislocalized protein during vegetative growth","termid":"FYPO:0000782"},{"relation_name":"is_a","term_name":"decreased protein localization to cell tip, with protein distributed in plasma membrane or cortex","termid":"FYPO:0003208"},{"relation_name":"is_a","term_name":"decreased protein localization to cell cortex of cell tip during vegetative growth","termid":"FYPO:0005798"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to cell cortex of cell tip, with protein distributed in cortex","synonyms":[{"name":"decreased protein localisation to cell cortex of cell tip, with protein distributed in cortex during vegetative growth","type":"exact"},{"name":"decreased protein localization to cell cortex of cell end, with protein distributed in cortex during vegetative growth","type":"exact"},{"name":"decreased protein localization to cell cortex of cell tip, with protein distributed in cortex, during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to of cell tip cortex, with protein distributed in cortex","type":"exact"},{"name":"reduced protein localization to cell cortex of cell tip, with protein distributed in cortex during vegetative growth","type":"exact"}],"termid":"FYPO:0006637"}


