# terms

id: FYPO:0006758
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell is too low to detect during G1 phase of the mitotic cell cycle. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein absent from cell during vegetative growth","termid":"FYPO:0001984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0006551","FYPO:0001320"],"is_obsolete":false,"name":"protein absent from cell during mitotic G1 phase","synonyms":[{"name":"protein absent from cell during G1 phase during vegetative growth","type":"exact"},{"name":"protein absent from cell during G1 phase of mitotic cell cycle","type":"exact"},{"name":"undetectable cellular protein level during mitotic G1 phase","type":"exact"}],"termid":"FYPO:0006758"}


id: PBO:0085189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"One of two type I myosin motors; contains proline-rich tail homology 2 (TH2) and SH3 domains; MYO5 deletion has little effect on growth, but myo3 myo5 double deletion causes severe defects in growth and actin cytoskeleton organization; MYO5 has a paralog, MYO3, that arose from the whole genome duplication","termid":"PBO:0085189"}


id: MONDO:0024234
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Seckel like syndrome majoor-krakauer type","synonyms":[{"name":"Bird-headed dwarfism microcephaly micrognathia","type":"related"}],"termid":"MONDO:0024234","xrefs":{"Monarch":{"xref_id":"0024234"}}}


id: GO:0120565
data:
  {"annotated_genes":["SJAG_03878"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99916],"is_not":false,"summary":null,"term":"GO:0120565"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of an alpha-D-mannosyl residue from dolichol-P-mannose to Man(3)-GlcN-acyl-PI, forming an alpha-(1->2)-D-mannosyl-D-mannose linkage. This transfers a fourth mannose to the GPI precursor, which is only present in some organisms/cell types.","definition_xrefs":["PMID:15208306"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-1,2-mannosyltransferase activity","termid":"GO:0000026"},{"relation_name":"is_a","term_name":"GPI mannosyltransferase activity","termid":"GO:0004376"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03878":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"dol-P-Man:Man(3)GlcN-acyl-PI alpha-1,2-mannosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"GPI-MT-IV activity","type":"exact"},{"name":"glycosylphosphatidylinositol-mannosyltransferase IV activity","type":"exact"}],"termid":"GO:0120565","terms_by_termid":{"GO:0120565":null}}


id: PBO:0090292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G1/S-specific B-type cyclin Cig1","termid":"PBO:0090292"}


id: PBO:0003843
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5.99.1.3","termid":"PBO:0003843"}


id: PBO:0070633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 4","termid":"PBO:0070633"}


id: GO:0150167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of histone H3-K4 acetylation.","definition_xrefs":["GOC:aruk","PMID:20737563"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone H3-K4 acetylation (obsolete GO:0150167)","termid":"GO:0150167"}


id: GO:1901242
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + doxorubicin(in) = ADP + phosphate + doxorubicin(out).","definition_xrefs":["PMID:12057006","GOC:TermGenie","PMID:15090538"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"alcohol transmembrane transporter activity","termid":"GO:0015665"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"ABC-type doxorubicin transporter activity","secondary_identifiers":["TC:3.A.1.105.1"],"synonyms":[{"name":"ATPase-coupled doxorubicin transmembrane transporter activity","type":"related"},{"name":"doxorubicin transmembrane-transporting ATPase activity","type":"related"}],"termid":"GO:1901242"}


id: GO:0110140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a flagellum attachment zone. FAZ is a network of cytoskeletal and membranous connections responsible for the lateral attachment of the cilium to the cell body in some trypanosomatid species.","definition_xrefs":["GOC:ach","PMID:26776656"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell junction organization","termid":"GO:0034330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flagellum attachment zone organization","synonyms":[{"name":"FAZ organization","type":"exact"},{"name":"flagellum attachment zone organisation","type":"exact"}],"termid":"GO:0110140"}


id: MONDO:1011135
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pulmonary hypertension that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary hypertension, non-human animal","termid":"MONDO:1010287"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary hypertension, pig","secondary_identifiers":["OMIA:000841-9823"],"termid":"MONDO:1011135","xrefs":{"Monarch":{"xref_id":"1011135"}}}


id: FYPO:0005379
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the spindle pole bodies are normal (i.e. indistinguishable from wild type) with respect to structure, composition, location, and orientation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component","termid":"FYPO:0001233"},{"relation_name":"output_of","term_name":"normal spindle pole body organization","termid":"FYPO:0005378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal spindle pole body","synonyms":[{"name":"normal SPB","type":"exact"}],"termid":"FYPO:0005379"}


id: FYPO:0000753
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutathione gamma-glutamylcysteinyltransferase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal glutathione gamma-glutamylcysteinyltransferase activity","termid":"FYPO:0000753"}


id: GO:0102356
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate(3-) = diphosphoric acid + (+)-isoitalicene.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete isoitalicene synthase activity (obsolete GO:0102356)","termid":"GO:0102356"}


id: PBO:0075420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm associated antigen 6","termid":"PBO:0075420"}


id: PBO:0038471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABCA9 antisense RNA 1","termid":"PBO:0038471"}


id: PBO:0045553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 5 pseudogene 2","termid":"PBO:0045553"}


id: MONDO:0021485
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the iris.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iris neoplasm","termid":"MONDO:0021224"},{"relation_name":"is_a","term_name":"benign neoplasm of eye","termid":"MONDO:0021454"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"benign neoplasm of iris","secondary_identifiers":["NCIT:C4555","SCTID:189151003","UMLS:C0346374","ICD9:224.0","icd11.foundation:549962833","MEDGEN:87560"],"synonyms":[{"name":"benign iris neoplasm","type":"exact"},{"name":"benign iris tumor","type":"exact"},{"name":"benign iris tumour","type":"exact"},{"name":"benign neoplasm of the iris","type":"exact"},{"name":"benign tumor of iris","type":"exact"},{"name":"benign tumor of the iris","type":"exact"},{"name":"benign tumour of iris","type":"exact"},{"name":"benign tumour of the iris","type":"exact"},{"name":"iris benign neoplasm","type":"exact"}],"termid":"MONDO:0021485","xrefs":{"Monarch":{"xref_id":"0021485"}}}


id: GO:0016859
data:
  {"annotated_genes":["SJAG_04352","SJAG_01270","SJAG_00950","SJAG_03905","SJAG_02308","SJAG_01246","SJAG_01714","SJAG_03238","SJAG_03601","SJAG_02551","SJAG_02413","SJAG_02620","SJAG_00078","SJAG_01005","SJAG_04155","SJAG_00470","SJAG_00602"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79729,74341,58268,71901,57901,73452,77697,79695,64859,73573,77573,65900,64720,94581,81890,79686,77194],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003755"}]},"cv_name":"molecular_function","definition":"Catalysis of a reaction that interconverts cis and trans isomers. Atoms or groups are termed cis or trans to one another when they lie respectively on the same or on opposite sides of a reference plane identifiable as common among stereoisomers.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isomerase activity","termid":"GO:0016853"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00078":null,"SJAG_00470":null,"SJAG_00602":null,"SJAG_00950":null,"SJAG_01005":null,"SJAG_01246":null,"SJAG_01270":null,"SJAG_01714":null,"SJAG_02308":null,"SJAG_02413":null,"SJAG_02551":null,"SJAG_02620":null,"SJAG_03238":null,"SJAG_03601":null,"SJAG_03905":null,"SJAG_04155":null,"SJAG_04352":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"cis-trans isomerase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["EC:5.2.-.-"],"termid":"GO:0016859","terms_by_termid":{"GO:0003755":null}}


id: GO:0102751
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + a glucosyl-glycogenin = (1,4-alpha-D-glucosyl)n-glucosyl glucogenin + UDP + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete UDP-alpha-D-glucose:glucosyl-glycogenin alpha-D-glucosyltransferase activity (obsolete GO:0102751)","termid":"GO:0102751"}


id: MONDO:0006166
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A columnar cell lesion characterized by the presence of enlarged terminal ductal lobular units with dilated acini. The acini are lined by more than two layers of columnar epithelial cells. Prominent apical cytoplasmic snouts are present. Secretions are often present in the lumina of the dilated acini.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperplasia","termid":"MONDO:0005043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"columnar cell hyperplasia of the breast","secondary_identifiers":["NCIT:C54183","MEDGEN:310623","UMLS:C1707446","EFO:1000199"],"synonyms":[{"name":"CCH","type":"exact"},{"name":"columnar cell hyperplasia of breast","type":"exact"}],"termid":"MONDO:0006166","xrefs":{"Monarch":{"xref_id":"0006166"}}}


id: GO:0035815
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the amount of sodium excreted in urine over a unit of time.","definition_xrefs":["GOC:yaf","GOC:mtg_25march11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of renal sodium excretion","termid":"GO:0035813"},{"relation_name":"is_a","term_name":"positive regulation of secretion","termid":"GO:0051047"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"renal sodium excretion","termid":"GO:0035812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of renal sodium excretion","synonyms":[{"name":"natriuresis","type":"broad"}],"termid":"GO:0035815"}


id: GO:0062187
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-(5Z,8Z,11Z,14Z-eicosatetraenoyl)-ethanolamine + O2 + reduced [NADPH--hemoprotein reductase] = H+ + H2O + N-(8,9-epoxy-5Z,11Z,14Z-eicosatrienoyl)-ethanolamine + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["PMID:21289075","RHEA:53140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anandamide epoxidase activity","termid":"GO:0062186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"anandamide 8,9 epoxidase activity","termid":"GO:0062187"}


id: GO:1900828
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving D-tyrosine.","definition_xrefs":["PMID:10766779","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aromatic amino acid metabolic process","termid":"GO:0009072"},{"relation_name":"is_a","term_name":"D-amino acid metabolic process","termid":"GO:0046416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"D-tyrosine metabolic process","synonyms":[{"name":"D-tyrosine metabolism","type":"exact"}],"termid":"GO:1900828"}


id: PBO:0040041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aryl hydrocarbon receptor nuclear translocator","termid":"PBO:0040041"}


id: GO:0098834
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The cytoplasmic component of the presynaptic endocytic zone.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cortex region","termid":"GO:0099738"},{"relation_name":"part_of","term_name":"presynaptic endocytic zone","termid":"GO:0098833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005938","GO:0005737"],"is_obsolete":false,"name":"presynaptic endocytic zone cytoplasmic component","synonyms":[{"name":"cortex of presynaptic endocytic zone","type":"exact"}],"termid":"GO:0098834"}


id: GO:2000829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of parathyroid hormone secretion.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of hormone secretion","termid":"GO:0046888"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of parathyroid hormone secretion","termid":"GO:2000828"},{"relation_name":"negatively_regulates","term_name":"parathyroid hormone secretion","termid":"GO:0035898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"negative regulation of parathyroid hormone secretion","synonyms":[{"name":"negative regulation of PTH secretion","type":"exact"},{"name":"negative regulation of parathormone secretion","type":"exact"},{"name":"negative regulation of parathyrin secretion","type":"exact"}],"termid":"GO:2000829"}


id: PBO:0073176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenoprotein H","termid":"PBO:0073176"}


id: MONDO:0020168
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete kinetic eyelid anomaly (obsolete MONDO:0020168)","secondary_identifiers":["Orphanet:98577"],"termid":"MONDO:0020168","xrefs":{"Monarch":{"xref_id":"0020168"}}}


id: PBO:0085940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; mutant is defective in directing meiotic recombination events to homologous chromatids; the authentic, non-tagged protein is detected in highly purified mitochondria and is phosphorylated","termid":"PBO:0085940"}


id: PBO:0082614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Coiled-coil 12S polarisome subunit; required for polarity establishment, apical bud growth, shmoo formation, filamentous differentiation; involved in Bni1p localization at sites of polarized growth, controlling polarized assembly of actin cables; role in apical growth affects diploid-specific bipolar bud site selection; retains Slt2p at bud tip to regulate ER inheritance; role in Ca2+ influx, cell fusion; S288C allele encoding Leu409 rather than Met linked with non-invasion","termid":"PBO:0082614"}


id: FYPO:0003274
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing S-nitrosoglutathione (GSNO).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0002058","FYPO:0000139","FYPO:0000257","FYPO:0002060","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on GSNO","synonyms":[{"name":"normal cell population growth in presence of GSNO","type":"exact"},{"name":"normal cell population growth on GSNO","type":"exact"},{"name":"normal cell population growth on S-nitrosoglutathione","type":"exact"},{"name":"normal cellular response to GSNO","type":"related"},{"name":"normal vegetative cell population growth on GSNO","type":"exact"}],"termid":"FYPO:0003274"}


id: GO:1900221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of amyloid-beta clearance.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"amyloid-beta clearance","termid":"GO:0097242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of amyloid-beta clearance","synonyms":[{"name":"regulation of beta-amyloid clearance","type":"exact"}],"termid":"GO:1900221"}


id: PBO:0073524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 binding domain protein 5 like","termid":"PBO:0073524"}


id: PBO:0026671
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_microtubule_plus-end_directed_mitotic_chromosome_migration","termid":"PBO:0026671"}


id: FYPO:0001959
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of cyclic AMP measured in a cell during nitrogen starvation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cAMP level","termid":"FYPO:0001666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal cAMP level during nitrogen starvation","synonyms":[{"name":"normal cAMP accumulation during nitrogen starvation","type":"related"},{"name":"normal cAMP level during nitrogen depletion","type":"exact"},{"name":"normal cAMP level during nitrogen deprivation","type":"exact"},{"name":"normal cellular cAMP level during nitrogen starvation","type":"exact"},{"name":"normal cyclic AMP level during nitrogen starvation","type":"exact"}],"termid":"FYPO:0001959"}


id: PBO:0089963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription regulator Ncb2","termid":"PBO:0089963"}


id: PBO:0059734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 8","termid":"PBO:0059734"}


id: FYPO:0007267
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the endoplasmic reticulum (ER) colocalizes with eisosomes to a greater extent than normal.","definition_xrefs":["PomBase:mah","PMID:32023460"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cortical endoplasmic reticulum organization","termid":"FYPO:0007571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased colocalization of cortical endoplasmic reticulum with eisosomes","synonyms":[{"name":"increased colocalization of cortical ER with eisosomes","type":"exact"},{"name":"increased colocalization of cortical endoplasmic reticulum with eisosomes during mitotic cell cycle","type":"related"},{"name":"increased colocalization of cortical endoplasmic reticulum with eisosomes during vegetative growth","type":"exact"},{"name":"increased colocalization of tubular cortical ER with eisosomes","type":"exact"},{"name":"increased cortical ER-eisosome colocalization","type":"exact"}],"termid":"FYPO:0007267"}


id: GO:0071704
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving an organic substance, any molecular entity containing carbon.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete organic substance metabolic process (obsolete GO:0071704)","synonyms":[{"name":"organic molecular entity metabolic process","type":"exact"},{"name":"organic molecular entity metabolism","type":"exact"},{"name":"organic substance metabolism","type":"exact"}],"termid":"GO:0071704"}


id: PBO:0078216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 7-9","termid":"PBO:0078216"}


id: MONDO:0014978
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any preimplantation embryonic lethality in which the cause of the disease is a mutation in the PADI6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"gene_count":0,"genotype_count":0,"name":"obsolete preimplantation embryonic lethality 2 (obsolete MONDO:0014978)","secondary_identifiers":["OMIM:617234"],"synonyms":[{"name":"PADI6 preimplantation embryonic lethality","type":"exact"},{"name":"PREMBL2","type":"exact"},{"name":"preimplantation embryonic lethality 2","type":"exact"},{"name":"preimplantation embryonic lethality 2; PREMBL2","type":"exact"},{"name":"preimplantation embryonic lethality caused by mutation in PADI6","type":"exact"},{"name":"preimplantation embryonic lethality type 2","type":"exact"}],"termid":"MONDO:0014978","xrefs":{"Monarch":{"xref_id":"0014978"}}}


id: GO:0019306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of GDP-D-rhamnose, a substance composed of rhamnose in glycosidic linkage with guanosine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar biosynthetic process","termid":"GO:0009226"},{"relation_name":"is_a","term_name":"GDP-D-rhamnose metabolic process","termid":"GO:0046382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"GDP-D-rhamnose biosynthetic process","secondary_identifiers":["MetaCyc:GDPRHAMSYN-PWY"],"synonyms":[{"name":"GDP-D-rhamnose anabolism","type":"exact"},{"name":"GDP-D-rhamnose biosynthesis","type":"exact"},{"name":"GDP-D-rhamnose formation","type":"exact"},{"name":"GDP-D-rhamnose synthesis","type":"exact"}],"termid":"GO:0019306"}


id: FYPO:0007952
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell is normal (i.e. indistinguishable from wild type), during stationary phase. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:val"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein level","termid":"FYPO:0004083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein level during stationary phase","termid":"FYPO:0007952"}


id: GO:0036403
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: arachidonate + O2 = (5Z,8S,9E,11Z,14Z)-8-hydroperoxyicosa-5,9,11,14-tetraenoate.","definition_xrefs":["RHEA:38675","GOC:lb","PMID:10625675"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"arachidonate 8(S)-lipoxygenase activity","secondary_identifiers":["KEGG_REACTION:R07053"],"synonyms":[{"name":"8(S)-lipoxygenase activity","type":"broad"},{"name":"8-lipoxygenase (S-type)","type":"broad"}],"termid":"GO:0036403"}


id: MONDO:0003048
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete type C thymoma (obsolete MONDO:0003048)","termid":"MONDO:0003048","xrefs":{"Monarch":{"xref_id":"0003048"}}}


id: PBO:0017698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMS complex subunit Mis14","termid":"PBO:0017698"}


id: GO:0010117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Protection mechanism used by plants and cyanobacteria under conditions of excess energy absorption as a consequence of the light reactions of photosynthesis.","definition_xrefs":["PMID:30765616"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to light stimulus","termid":"GO:0009416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"photoprotection","termid":"GO:0010117"}


id: FYPO:0000453
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the total amount of DNA in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"},{"relation_name":"is_a","term_name":"altered DNA level during vegetative growth","termid":"FYPO:0004321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"DNA content decreased during vegetative growth","synonyms":[{"name":"DNA content decreased during mitotic cell cycle","type":"related"},{"name":"DNA content reduced during vegetative growth","type":"exact"},{"name":"decreased DNA content during vegetative growth","type":"exact"},{"name":"decreased DNA level during vegetative growth","type":"exact"}],"termid":"FYPO:0000453"}


id: GO:0050348
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 alpha,alpha'-trehalose 6-mycolate = alpha,alpha'-trehalose 6,6'-bismycolate + alpha,alpha-trehalose.","definition_xrefs":["EC:2.3.1.122","RHEA:23472"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"trehalose O-mycolyltransferase activity","secondary_identifiers":["KEGG_REACTION:R07248","MetaCyc:RXN1G-874"],"synonyms":[{"name":"alpha,alpha'-trehalose 6-monomycolate:alpha,alpha'-trehalose mycolyltransferase activity","type":"related"},{"name":"alpha,alpha'-trehalose-6-mycolate:alpha,alpha'-trehalose-6-mycolate 6'-mycolyltransferase activity","type":"related"}],"termid":"GO:0050348"}


id: PATO:0000322
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color hue with high wavelength of the long-wave end of the visible spectrum, evoked in the human observer by radiant energy with wavelengths of approximately 630 to 750 nanometers.","definition_xrefs":["Dictionary:http://dictionary.reference.com/"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color","termid":"PATO:0000014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"red","termid":"PATO:0000322"}


id: GO:0000414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the covalent addition of a methyl group to the lysine at position 36 of histone H3.","definition_xrefs":["GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H3-K36 methylation (obsolete GO:0000414)","termid":"GO:0000414"}


id: GO:2000714
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of maintenance of meiotic sister chromatid cohesion along the chromosome arms.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of maintenance of meiotic sister chromatid cohesion, arms (obsolete GO:2000714)","synonyms":[{"name":"positive regulation of maintenance of meiotic sister chromatin cohesion along arms","type":"exact"},{"name":"positive regulation of maintenance of sister chromatin cohesion along arms at meiosis I","type":"exact"}],"termid":"GO:2000714"}


id: GO:0031704
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an apelin receptor.","definition_xrefs":["GOC:mah","PMID:12787050","GOC:nln","GOC:vp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor binding","termid":"GO:0071855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"apelin receptor binding","secondary_identifiers":["GO:0042569"],"synonyms":[{"name":"APJ receptor binding","type":"exact"},{"name":"apelin receptor ligand","type":"narrow"}],"termid":"GO:0031704"}


id: MONDO:0007711
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bencze syndrome or hemifacial hyperplasia with strabismus is a malformation syndrome involving the abnormal growth of the facial skeleton as well as its soft tissue structure and organs, and is characterized by mild facial asymmetry with unaffected neurocranium and eyeballs, as well as by esotropia, amblyopia and/or convergent strabismus, and occasionally submucous cleft palate. Transmission is autosomal dominant. There have been no further descriptions in the literature since 1979.","definition_xrefs":["Orphanet:1241"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bencze syndrome","secondary_identifiers":["GARD:2633","MESH:C564199","UMLS:C1841640","OMIM:141350","MEDGEN:330655","SCTID:733046006"],"synonyms":[{"name":"Bencze syndrome","type":"exact"},{"name":"hemifacial hyperplasia strabismus","type":"related"},{"name":"hemifacial hyperplasia with strabismus","type":"related"},{"name":"hemifacial hyperplasia-strabismus syndrome","type":"exact"}],"termid":"MONDO:0007711","xrefs":{"Monarch":{"xref_id":"0007711"}}}


id: GO:0021628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the olfactory nerve. This process pertains to the initial formation of a structure from unspecified parts. The olfactory nerve is a collection of sensory nerve rootlets that extend down from the olfactory bulb to the olfactory mucosa of the upper parts of the nasal cavity. This nerve conducts odor information to the brainstem.","definition_xrefs":["ISBN:0838580343","GOC:cls","GOC:dgh","GOC:dph","GO_REF:0000021","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve formation","termid":"GO:0021603"},{"relation_name":"part_of","term_name":"olfactory nerve morphogenesis","termid":"GO:0021627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olfactory nerve formation","synonyms":[{"name":"CN I biosynthesis","type":"related"},{"name":"CN I formation","type":"related"}],"termid":"GO:0021628"}


id: GO:0001313
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Excision from the chromosome and circularization of a region of chromosomal DNA, generally, but not always, via homologous recombination between direct tandem repeats, in dividing cells as they age.","definition_xrefs":["GOC:jh"],"gene_count":0,"genotype_count":0,"name":"obsolete formation of extrachromosomal circular DNA involved in replicative cell aging (obsolete GO:0001313)","synonyms":[{"name":"assembly of extrachromosomal circular DNA involved in replicative cell aging","type":"exact"},{"name":"formation of extrachromosomal circular DNA during replicative cell ageing","type":"related"},{"name":"formation of extrachromosomal circular DNA during replicative cell aging","type":"related"}],"termid":"GO:0001313"}


id: FYPO:0000059
data:
  {"alleles_by_uniquename":{"SJAG_00118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00118","name":"mid2delta","uniquename":"SJAG_00118:allele-1"},"SJAG_00871:allele-1":{"allele_type":"amino_acid_mutation","description":"cut3-T19E","gene_uniquename":"SJAG_00871","name":"cut3-T19E","uniquename":"SJAG_00871:allele-1"},"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_01330:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01330","name":"mad2delta","uniquename":"SJAG_01330:allele-1"},"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03449:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"man1DHEH","gene_uniquename":"SJAG_03449","name":"Man1DHEH","uniquename":"SJAG_03449:allele-2"},"SJAG_03449:allele-3":{"allele_type":"amino_acid_insertion_and_deletion","description":"man1-1-488","gene_uniquename":"SJAG_03449","name":"man1-1-488","uniquename":"SJAG_03449:allele-3"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"},"SJAG_03596:allele-1":{"allele_type":"amino_acid_mutation","description":"L264P,P442T","gene_uniquename":"SJAG_03596","name":"cdc15-A","uniquename":"SJAG_03596:allele-1"},"SJAG_04280:allele-1":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-1"},"SJAG_04284:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04284","name":"nup61delta","uniquename":"SJAG_04284:allele-1"},"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic 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cellular process phenotype in which a cell does not proceed normally through a mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle","termid":"FYPO:0000011"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00118":null,"SJAG_00871":null,"SJAG_01143":null,"SJAG_01330":null,"SJAG_01956":null,"SJAG_02392":null,"SJAG_02592":null,"SJAG_03351":null,"SJAG_03449":null,"SJAG_03575":null,"SJAG_03596":null,"SJAG_04280":null,"SJAG_04284":null,"SJAG_04332":null,"SJAG_04464":null,"SJAG_04522":null},"genotype_count":21,"genotypes_by_uniquename":{"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Man1DHEH(man1DHEH)","display_uniquename":"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-2","expression":"Not assayed or wild 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mid1delta","display_uniquename":"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type__mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03596:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild 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type"}]}]},"mad2delta":{"display_name":"mad2delta","display_uniquename":"mad2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01330:allele-1","expression":"Null"}]}]},"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type":{"display_name":"man1-1-488(aa)","display_uniquename":"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-3","expression":"Not assayed or wild type"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]},"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__mid2delta":{"display_name":"mid1delta mid2delta","display_uniquename":"mid1delta__mid2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_00118:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"mid2delta":{"display_name":"mid2delta","display_uniquename":"mid2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00118:allele-1","expression":"Null"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]},"nup61delta":{"display_name":"nup61delta","display_uniquename":"nup61delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04284:allele-1","expression":"Null"}]}]},"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pim1-R152C(aa)","display_uniquename":"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"rga4delta wee1-as8(T582G aa)","display_uniquename":"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_04522","SJAG_04464","SJAG_00871","SJAG_00118","SJAG_02392","SJAG_01143","SJAG_03596","SJAG_04280"],"name":"abnormal mitotic cell cycle","references_by_uniquename":{"PMID:21802294":null,"PMID:23786411":null,"PMID:24184107":null,"PMID:25866389":null,"PMID:27059155":null,"PMID:28954740":null,"PMID:30664646":null,"PMID:32109380":null,"PMID:32915139":null,"PMID:33791858":null},"single_locus_annotated_genes":["SJAG_02392","SJAG_03596","SJAG_03575","SJAG_00118","SJAG_04464","SJAG_03351","SJAG_04332","SJAG_02592","SJAG_01330","SJAG_04284","SJAG_04522","SJAG_01956","SJAG_01143","SJAG_03449"],"single_locus_genotype_uniquenames":["cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","rga4delta","mid1delta","cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type","nup61delta","mad2delta","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","sty1delta","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","mid2delta","pom1delta","man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","man1delta","pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"mitotic cell cycle defects","type":"exact"},{"name":"mitotic cell cycle: abnormal","type":"related"}],"termid":"FYPO:0000059","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000248":null,"FYECO:0000338":null,"FYPO:0000118":null,"FYPO:0000231":null,"FYPO:0000324":null,"FYPO:0000618":null,"FYPO:0000619":null,"FYPO:0000671":null,"FYPO:0000729":null,"FYPO:0001369":null,"FYPO:0002026":null,"FYPO:0002998":null,"FYPO:0003738":null,"FYPO:0004318":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0081636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 564","termid":"PBO:0081636"}


id: PBO:0087480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of chromatin assembly factor I (CAF-1), with Rlf2p and Msi1p; chromatin assembly by CAF-1 is important for multiple processes including silencing at telomeres, mating type loci, and rDNA; maintenance of kinetochore structure, deactivation of the DNA damage checkpoint after DNA repair, chromatin dynamics during transcription; and repression of divergent transcription; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0087480"}


id: PBO:0059586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial amidoxime reducing component 1","termid":"PBO:0059586"}


id: PBO:0063075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAPOLA divergent transcript","termid":"PBO:0063075"}


id: GO:0000138
data:
  {"annotated_genes":["SJAG_00567","SJAG_01025","SJAG_03278","SJAG_03634","SJAG_03347"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[73143,78288,80397,97870,101323],"is_not":false,"summary":null,"term":"GO:0000138"}]},"cv_name":"cellular_component","definition":"The Golgi cisterna farthest from the endoplasmic reticulum; the final processing compartment through which proteins pass before exiting the Golgi apparatus; the compartment in which N-linked protein glycosylation is completed.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi cisterna","termid":"GO:0031985"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00567":null,"SJAG_01025":null,"SJAG_03278":null,"SJAG_03347":null,"SJAG_03634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005794"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005794"],"is_obsolete":false,"name":"Golgi trans cisterna","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"late Golgi","type":"related"}],"termid":"GO:0000138","terms_by_termid":{"GO:0000138":null}}


id: GO:0010076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism retains a population of floral meristem cells, preventing the commitment of all stem cell progeny to a differentiated cell fate.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of meristem identity","termid":"GO:0010074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of floral meristem identity","termid":"GO:0010076"}


id: FYPO:0006563
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which MBF complex assembly is abolished during G1 phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-containing complex assembly","termid":"FYPO:0000447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abolished MBF complex assembly during mitotic G1 phase","synonyms":[{"name":"MBF complex assembly abolished during mitotic G1 phase","type":"exact"},{"name":"abolished MBF complex assembly during G1 phase during vegetative growth","type":"exact"},{"name":"abolished MBF complex assembly during G1 phase of mitotic cell cycle","type":"exact"},{"name":"abolished MBF transcription complex assembly during mitotic G1 phase","type":"exact"}],"termid":"FYPO:0006563"}


id: PBO:0060339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin VC","termid":"PBO:0060339"}


id: MONDO:0060583
data:
  {"annotated_genes":["SJAG_02075"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87003],"is_not":false,"summary":null,"term":"MONDO:0060583"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02075":null},"genotype_count":0,"is_obsolete":false,"name":"platelet abnormalities with eosinophilia and immune-mediated inflammatory disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0112004","OMIM:617718","UMLS:C4540232","MEDGEN:1618052"],"synonyms":[{"name":"PLTEID","type":"related"},{"name":"immunodeficiency 71 with inflammatory disease and congenital thrombocytopenia","type":"exact"},{"name":"platelet abnormalities with eosinophilia and immune-mediated inflammatory disease","type":"exact"}],"termid":"MONDO:0060583","terms_by_termid":{"MONDO:0060583":null},"xrefs":{"Monarch":{"xref_id":"0060583"}}}


id: GO:0036089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Generation of the cleavage furrow, a shallow groove in the cell surface near the old metaphase plate that marks the site of cytokinesis. This process includes the recruitment and localized activation of signals such as RhoA at the site of the future furrow to ensure that furrowing initiates at the correct site in the cell.","definition_xrefs":["PMID:15811947","GOC:ans","PMID:2192590","PMID:20687468"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokinetic process","termid":"GO:0032506"},{"relation_name":"is_a","term_name":"plasma membrane invagination","termid":"GO:0099024"},{"relation_name":"part_of","term_name":"cytoskeleton-dependent cytokinesis","termid":"GO:0061640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0061024","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"cleavage furrow formation","synonyms":[{"name":"cleavage furrow positioning","type":"narrow"}],"termid":"GO:0036089"}


id: GO:0032576
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a linoleoyl ((9Z,12Z)-octadeca-9,12-dienoyl) group to an oxygen atom on the acceptor molecule.","definition_xrefs":["GOC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"O-linoleoyltransferase activity","termid":"GO:0032576"}


id: PBO:0076736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"t-complex 10 like 2, pseudogene","termid":"PBO:0076736"}


id: PBO:0031757
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_centromere","termid":"PBO:0031757"}


id: MONDO:0009462
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inosine phosphorylase deficiency, immune defect due to","secondary_identifiers":["MESH:C565465","OMIM:243080","MEDGEN:344562","UMLS:C1855737"],"synonyms":[{"name":"inosine phosphorylase deficiency, immune defect due to","type":"exact"}],"termid":"MONDO:0009462","xrefs":{"Monarch":{"xref_id":"0009462"}}}


id: GO:0002165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the instar larva or pupa over time, from its formation to the mature structure. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organism development","termid":"GO:0007275"},{"relation_name":"is_a","term_name":"post-embryonic development","termid":"GO:0009791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"instar larval or pupal development","termid":"GO:0002165"}


id: GO:0042716
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A pigment-bearing structure that is derived from the cytoplasmic membrane, sometimes consisting of simple invaginations and sometimes a complete vesicle. This component is found in certain photosynthetic bacteria and cyanobacteria.","definition_xrefs":["ISBN:0395825172","PMID:11867431","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"plasma membrane-derived chromatophore","synonyms":[{"name":"chromatophore vesicle","type":"related"}],"termid":"GO:0042716"}


id: PBO:0091059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"candidate S. pombe SPAC23C11.07 ortholog, syntenic position","termid":"PBO:0091059"}


id: FYPO:0004382
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which a single kinetochore becomes attached to both spindle poles, and sister chromatids do not move towards the spindle poles at the same time during mitosis prior to completion of chromosome segregation.","definition_xrefs":["PMID:20935472","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"lagging mitotic chromosomes","termid":"FYPO:0000228"},{"relation_name":"has_part","term_name":"merotelic kinetochore attachment during mitosis","termid":"FYPO:0004381"},{"relation_name":"is_a","term_name":"abnormal attachment of mitotic spindle microtubules to kinetochore","termid":"FYPO:0004213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000337"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000337","FYPO:0001985","FYPO:0000641","FYPO:0005447","FYPO:0000138","FYPO:0000631"],"is_obsolete":false,"name":"meroterically attached lagging mitotic chromosomes","synonyms":[{"name":"abnormal mitotic sister chromatid segregation, with merotelic kinetochore attachment and lagging mitotic chromosomes","type":"exact"},{"name":"lagging mitotic chromosomes with merotelic kinetochore attachment","type":"exact"},{"name":"lagging mitotic sister chromatids, with merotelic kinetochore attachment","type":"exact"},{"name":"merotelic kinetochore attachment with lagging mitotic chromosomes","type":"exact"},{"name":"meroterically attached lagging mitotic chromosomes during mitotic cell cycle","type":"related"},{"name":"meroterically attached lagging mitotic chromosomes during vegetative growth","type":"exact"}],"termid":"FYPO:0004382"}


id: MONDO:0016209
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Benign nocturnal alternating hemiplegia of childhood is a rare neurologic disease characterized by recurrent attacks of nocturnal screaming or crying followed or accompanied by unilateral or sometimes bilateral hemiplegia. Disorder is not associated with neurological or developmental impairments but may be associated with mild behavioral abnormalities.","definition_xrefs":["Orphanet:209973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alternating hemiplegia","termid":"MONDO:0016210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"benign familial nocturnal alternating hemiplegia of childhood","secondary_identifiers":["MEDGEN:1668716","UMLS:C4749822","GARD:20445","icd11.foundation:447920235"],"synonyms":[{"name":"benign familial nocturnal alternating hemiplegia in childhood","type":"exact"},{"name":"benign nocturnal alternating hemiplegia of childhood","type":"related"}],"termid":"MONDO:0016209","xrefs":{"Monarch":{"xref_id":"0016209"}}}


id: PBO:0027897
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_snRNA_level","termid":"PBO:0027897"}


id: GO:0005396
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete transmembrane conductance regulator activity (obsolete GO:0005396)","synonyms":[{"name":"transmembrane conductance regulator activity","type":"exact"}],"termid":"GO:0005396"}


id: PBO:0066542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling 7","termid":"PBO:0066542"}


id: PBO:0002598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk2 (predicted)","termid":"PBO:0002598"}


id: PBO:0006184
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-localizes","termid":"PBO:0006184"}


id: GO:0051709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the killing by an organism of cells in another organism.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell killing","termid":"GO:0031341"},{"relation_name":"is_a","term_name":"modulation of process of another organism","termid":"GO:0035821"},{"relation_name":"regulates","term_name":"killing of cells of another organism","termid":"GO:0031640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of killing of cells of another organism","secondary_identifiers":["GO:0044531","GO:0052459","GO:0052248","GO:0052433"],"synonyms":[{"name":"modulation by organism of apoptotic process in other organism involved in symbiotic interaction","type":"narrow"},{"name":"modulation of programmed cell death in other organism","type":"narrow"},{"name":"modulation of programmed cell death in other organism involved in symbiotic interaction","type":"narrow"},{"name":"regulation of killing of cells of other organism","type":"exact"}],"termid":"GO:0051709"}


id: PBO:0004947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM23 translocase complex subunit Tim21 (predicted)","termid":"PBO:0004947"}


id: MONDO:0016489
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Delta-beta-thalassemia is a form of beta-thalassemia characterized by decreased or absent synthesis of the delta- and beta-globin chains with a compensatory increase in expression of fetal gamma-chain synthesis.","definition_xrefs":["Orphanet:231237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-thalassemia and related diseases","termid":"MONDO:0017145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"delta-beta-thalassemia","secondary_identifiers":["ICD9:282.49","MedDRA:10012236","NCIT:C172823","SCTID:16360009","DOID:0080773","UMLS:C0271985","GARD:17165","MEDGEN:78790","MESH:C562716","ICD10CM:D56.2"],"termid":"MONDO:0016489","xrefs":{"Monarch":{"xref_id":"0016489"}}}


id: MOD:00307
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cyclizes an L-asparagine residue to form a carboxyl-terminal L-aspartimide.","definition_xrefs":["PubMed:7662664","DeltaMass:18","Unimod:23#N","PubMed:12771378","RESID:AA0302","PubMed:2378679","PubMed:7988548","PubMed:9309583"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclized residue","termid":"MOD:00601"},{"relation_name":"is_a","term_name":"dehydrated residue","termid":"MOD:00704"},{"relation_name":"is_a","term_name":"modified L-asparagine residue","termid":"MOD:00903"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-aspartimide","synonyms":[{"name":"(3S)-3-amino-2,5-pyrrolidinedione","type":"exact"},{"name":"2-amino-butanimide","type":"exact"},{"name":"ASI","type":"exact"},{"name":"Dehydrated","type":"related"},{"name":"Dehydration","type":"related"},{"name":"L-2-aminosuccinimide","type":"exact"},{"name":"L-3-aminosuccinimide","type":"related"},{"name":"L-asparaginimide","type":"exact"},{"name":"L-aspartimide","type":"exact"},{"name":"Succinimide formation from asparagine","type":"exact"},{"name":"alpha-aminosuccinimide","type":"exact"}],"termid":"MOD:00307"}


id: GO:0060130
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a thyroid-stimulating hormone-secreting cell over time, from its formation to the mature structure. A thyroid-stimulating hormone-secreting cell is a basophil cell of the anterior pituitary that produces thyroid stimulating hormone, thyrotrophin.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glandular epithelial cell development","termid":"GO:0002068"},{"relation_name":"is_a","term_name":"forebrain neuron development","termid":"GO:0021884"},{"relation_name":"part_of","term_name":"thyroid-stimulating hormone-secreting cell differentiation","termid":"GO:0060129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thyroid-stimulating hormone-secreting cell development","synonyms":[{"name":"TSH-secreting cell development","type":"exact"},{"name":"beta-basophil development","type":"exact"},{"name":"thyroid stimulating hormone secreting cell development","type":"exact"},{"name":"thyrotrope development","type":"exact"},{"name":"thyrotroph development","type":"exact"}],"termid":"GO:0060130"}


id: FYPO:0004313
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to CENP-A containing chromatin is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to CENP-A containing chromatin","termid":"FYPO:0004311"},{"relation_name":"is_a","term_name":"decreased protein localization to centromeric chromatin during vegetative growth","termid":"FYPO:0006599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to CENP-A containing chromatin","synonyms":[{"name":"decreased protein localisation to CENP-A containing chromatin","type":"exact"},{"name":"decreased protein localization to CENP-A containing chromatin during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to CENP-A containing chromatin during vegetative growth","type":"exact"},{"name":"decreased protein localization to centromeric core region chromatin","type":"exact"},{"name":"reduced protein localization to CENP-A containing chromatin","type":"exact"}],"termid":"FYPO:0004313"}


id: PBO:0088838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-di-phosphooligosaccharide-protein glycotransferase subunit Wbp1","termid":"PBO:0088838"}


id: PBO:0043855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRACD like","termid":"PBO:0043855"}


id: SO:0002204
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A point in nucleic acid where a cleavage event occurs.","direct_ancestors":[{"relation_name":"is_a","term_name":"junction","termid":"SO:0000699"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleotide_cleavage_site","synonyms":[{"name":"INSDC_feature:misc_feature","type":"broad"},{"name":"INSDC_note:nucleotide_cleavage_site","type":"exact"},{"name":"nucleotide cleavage site","type":"exact"}],"termid":"SO:0002204"}


id: PBO:0001258
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by Prr1","termid":"PBO:0001258"}


id: MONDO:0000806
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A allergy involving a Turbo cornutus.","definition_xrefs":["MONDO:patterns/allergy"],"gene_count":0,"genotype_count":0,"name":"obsolete horned turban snail allergy (obsolete MONDO:0000806)","secondary_identifiers":["DOID:0060531"],"synonyms":[{"name":"Turbo cornutus allergic disease","type":"exact"},{"name":"Turbo cornutus allergy","type":"exact"},{"name":"Turbo cornutus caused allergic disease","type":"exact"},{"name":"allergy of Turbo cornutus","type":"exact"}],"termid":"MONDO:0000806","xrefs":{"Monarch":{"xref_id":"0000806"}}}


id: MONDO:0036217
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pontocerebellar hypoplasia, hypotonia, and respiratory insufficiency syndrome, neonatal lethal","termid":"MONDO:0032931"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lethal pontocerebellar hypoplasia-hypotonia-respiratory insufficiency syndrome due to a point mutation","secondary_identifiers":["GARD:18036","MEDGEN:1842868","UMLS:C5681819","Orphanet:615983"],"termid":"MONDO:0036217","xrefs":{"Monarch":{"xref_id":"0036217"}}}


id: GO:0036244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a neutral pH (pH close to 7) stimulus. pH is a measure of the acidity or basicity of an aqueous solution.","definition_xrefs":["GOC:di","Wikipedia:PH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to neutral pH","termid":"GO:0036176"},{"relation_name":"is_a","term_name":"cellular response to pH","termid":"GO:0071467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to neutral pH","termid":"GO:0036244"}


id: GO:0046620
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of growth of an organ of an organism.","definition_xrefs":["GOC:bf","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental growth","termid":"GO:0048638"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"organ growth","termid":"GO:0035265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of organ growth","termid":"GO:0046620"}


id: MONDO:0043985
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation that includes the brain, spinal cord and surrounding tissues secondary to systemic lupus erythematosus (SLE); it is associated with neurological and/or psychiatric features.","definition_xrefs":["NCIT:C116919"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"central nervous system vasculitis","termid":"MONDO:0003346"},{"relation_name":"excluded_subClassOf","term_name":"meningoencephalitis","termid":"MONDO:0005845"},{"relation_name":"is_a","term_name":"autoimmune disorder of central nervous system","termid":"MONDO:0000568"},{"relation_name":"is_a","term_name":"systemic lupus erythematosus","termid":"MONDO:0007915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"central nervous system lupus","secondary_identifiers":["MESH:D020945","MEDGEN:156265","UMLS:C0752332"],"synonyms":[{"name":"CNS lupus","type":"exact"},{"name":"Meningoencephalitides, lupus","type":"related"},{"name":"central nervous system lupus","type":"exact"},{"name":"central nervous system lupus vasculitis","type":"related"},{"name":"central nervous system systemic lupus Erythematosis","type":"related"},{"name":"lupus Meningoencephalitides","type":"related"},{"name":"lupus meningoencephalitis","type":"related"},{"name":"meningoencephalitis, lupus","type":"related"},{"name":"neuropsychiatric systemic lupus erythematosus","type":"related"},{"name":"systemic lupus Erythematosis, central nervous system","type":"related"}],"termid":"MONDO:0043985","xrefs":{"Monarch":{"xref_id":"0043985"}}}


id: GO:0051483
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of terpenoids, independent of mevalonate. Isopentenyl diphosphate (IPP) is the fundamental unit in terpenoid biosynthesis, and in mevalonate-independent biosynthesis, it is produced from pyruvate and glyceraldehyde 3-phosphate via intermediates including 1-deoxy-D-xylulose 5-phosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid biosynthetic process","termid":"GO:0016114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"terpenoid biosynthetic process, mevalonate-independent","synonyms":[{"name":"mevalonate-independent terpene biosynthesis","type":"narrow"},{"name":"mevalonate-independent terpene biosynthetic process","type":"narrow"},{"name":"mevalonate-independent terpenoid biosynthesis","type":"exact"},{"name":"mevalonate-independent terpenoid biosynthetic process","type":"exact"},{"name":"terpene biosynthesis, mevalonate-independent","type":"narrow"},{"name":"terpene biosynthetic process, mevalonate-independent","type":"narrow"},{"name":"terpenoid anabolism, mevalonate-independent","type":"exact"},{"name":"terpenoid formation, mevalonate-independent","type":"exact"},{"name":"terpenoid synthesis, mevalonate-independent","type":"exact"}],"termid":"GO:0051483"}


id: GO:0071980
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell gliding that results from the actions of cell surface adhesin proteins that are propelled by membrane motor proteins.","definition_xrefs":["PMID:18461074"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell gliding","termid":"GO:0071976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell surface adhesin-mediated gliding motility","termid":"GO:0071980"}


id: GO:0140421
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement into cell of externally available heme by receptor-mediated endocytosis.","definition_xrefs":["PMID:28193844"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocytic iron import into cell","termid":"GO:0140298"},{"relation_name":"is_a","term_name":"heme import into cell","termid":"GO:0140420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0098771","GO:0008150","GO:0051179","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"endocytic heme import into cell","synonyms":[{"name":"heme assimilation","type":"broad"}],"termid":"GO:0140421"}


id: FYPO:0007112
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process in which depolymerization (i.e. removal of tubulin dimers) of microtubules occurs at a lower rate, or speed, as part of centromere clustering during meiotic prophase I.","definition_xrefs":["PMID:23770679","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule depolymerization","termid":"FYPO:0007111"},{"relation_name":"is_a","term_name":"decreased microtubule depolymerisation involved in meitotic centromere clustering during meiotic prophase I","termid":"FYPO:0009058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000054"],"is_obsolete":false,"name":"decreased rate of microtubule depolymerization involved in meiotic centromere clustering during meiotic prophase I","synonyms":[{"name":"decreased microtubule depolymerisation speed involved in meiotic centromere clustering during meiotic prophase I","type":"exact"},{"name":"decreased microtubule depolymerization speed involved in meiotic centromere clustering during meiotic prophase I","type":"exact"},{"name":"decreased microtubule shrinkage shrinkage speed involved in meiotic centromere clustering during meiotic prophase I","type":"exact"},{"name":"decreased microtubule shrinkage speed involved in meiotic centromere clustering during meiotic prophase I","type":"exact"},{"name":"decreased rate of microtubule depolymerisation involved in meiotic centromere clustering during meiotic prophase I","type":"exact"},{"name":"decreased rate of microtubule depolymerization involved in meiotic centromere clustering during prophase I","type":"exact"},{"name":"decreased rate of microtubule depolymerization involved in meiotic chromosome clustering during meiotic prophase I","type":"related"},{"name":"decreased rate of microtubule depolymerization involved in meiotic kinetochore retrieval during meiotic prophase I","type":"related"},{"name":"reduced rate of microtubule depolymerization involved in meiotic centromere clustering during meiotic prophase I","type":"exact"}],"termid":"FYPO:0007112"}


id: GO:0051120
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 12S-5Z,8Z,10E,14Z-12-hydro(pero)xy-eicosa-5,8,10,14-tetraenoic acid = (5Z,9E,14Z)-(8,11R,12S)-11,12-epoxy-8-hydroxyicosa-5,9,14-trienoate. 12S-5Z,8Z,10E,14Z-12-hydro(pero)xy-eicosa-5,8,10,14-tetraenoic acid is also known as 12S-HpETE, and (5Z,9E,14Z)-(8,11R,12S)-11,12-epoxy-8-hydroxyicosa-5,9,14-trienoate as hepoxilin A3.","definition_xrefs":["PMID:15123652"],"gene_count":0,"genotype_count":0,"name":"obsolete hepoxilin A3 synthase activity (obsolete GO:0051120)","secondary_identifiers":["Reactome:R-HSA-8942208","Reactome:R-HSA-2161794"],"termid":"GO:0051120"}


id: PBO:0066903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 204","termid":"PBO:0066903"}


id: MONDO:0015446
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Middle aortic coarctation is a rare vascular anomaly characterized by the segmental narrowing of the abdominal and/or distal descending thoracic aorta with varying involvement of the visceral and renal arteries that commonly presents in children and young adults with early onset and refractory hypertension, abdominal angina, lower-limb claudication and that can lead to life-threatening complications associated with severe hypertension (i.e. myocardial infarction, heart failure, aortic rupture, renal insufficiency and intracranial hemorrhage). It may be due to various congenital or acquired causes, but it is most often secondary to an acquired inflammatory disease (i.e. Takayasu arteritis or giant cell arteritis).","definition_xrefs":["Orphanet:1456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aorta coarctation","termid":"MONDO:0007345"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atypical coarctation of aorta","secondary_identifiers":["SCTID:471268000","MEDGEN:758831","NANDO:2200284","UMLS:C3496579","GARD:18723"],"synonyms":[{"name":"Midaortic syndrome","type":"exact"},{"name":"coarctation of the abdominal aorta","type":"exact"},{"name":"mid-aortic dysplastic syndrome","type":"exact"},{"name":"mid-aortic syndrome","type":"exact"},{"name":"middle aortic syndrome","type":"exact"}],"termid":"MONDO:0015446","xrefs":{"Monarch":{"xref_id":"0015446"}}}


id: PR:O94291
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A sorting nexin-3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin-3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC887.06c","secondary_identifiers":["UniProtKB:O94291"],"synonyms":[{"name":"SPBC887.06c","type":"related"},{"name":"Spom972h-SNX3","type":"exact"},{"name":"grd19","type":"related"}],"termid":"PR:O94291"}


id: PBO:0036074
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_microtubule_organizing_center","termid":"PBO:0036074"}


id: GO:0010764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of fibroblast cell migration. Fibroblast cell migration is accomplished by extension and retraction of a pseudopodium.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fibroblast migration","termid":"GO:0010762"},{"relation_name":"is_a","term_name":"negative regulation of cell migration","termid":"GO:0030336"},{"relation_name":"negatively_regulates","term_name":"fibroblast migration","termid":"GO:0010761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of fibroblast migration","synonyms":[{"name":"negative regulation of fibroblast cell migration","type":"exact"}],"termid":"GO:0010764"}


id: GO:1901250
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of lung goblet cell differentiation.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell differentiation","termid":"GO:0030857"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of lung goblet cell differentiation","termid":"GO:1901249"},{"relation_name":"negatively_regulates","term_name":"lung goblet cell differentiation","termid":"GO:0060480"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lung goblet cell differentiation","synonyms":[{"name":"down regulation of lung goblet cell differentiation","type":"exact"},{"name":"down regulation of pulmonary goblet cell differentiation","type":"exact"},{"name":"down-regulation of lung goblet cell differentiation","type":"exact"},{"name":"down-regulation of pulmonary goblet cell differentiation","type":"exact"},{"name":"downregulation of lung goblet cell differentiation","type":"exact"},{"name":"downregulation of pulmonary goblet cell differentiation","type":"exact"},{"name":"inhibition of lung goblet cell differentiation","type":"narrow"},{"name":"inhibition of pulmonary goblet cell differentiation","type":"narrow"},{"name":"negative regulation of pulmonary goblet cell differentiation","type":"exact"}],"termid":"GO:1901250"}


id: MONDO:0032855
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with dysmorphic facies and distal skeletal anomalies","secondary_identifiers":["MEDGEN:1684792","GARD:18521","UMLS:C5231448","OMIM:618659"],"synonyms":[{"name":"NEDDFSA","type":"related"},{"name":"NEURODEVELOPMENTAL DISORDER WITH DYSMORPHIC FACIES AND DISTAL SKELETAL ANOMALIES","type":"related"}],"termid":"MONDO:0032855","xrefs":{"Monarch":{"xref_id":"0032855"}}}


id: GO:0033352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of UDP-D-apiose, uridinediphosphoapicose, a substance composed of apiose in glycosidic linkage with uridine diphosphate.","definition_xrefs":["MetaCyc:PWY-5113","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar biosynthetic process","termid":"GO:0009226"},{"relation_name":"is_a","term_name":"UDP-D-apiose metabolic process","termid":"GO:0033351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"UDP-D-apiose biosynthetic process","synonyms":[{"name":"UDP-D-apiose anabolism","type":"exact"},{"name":"UDP-D-apiose biosynthesis","type":"exact"},{"name":"UDP-D-apiose formation","type":"exact"},{"name":"UDP-D-apiose synthesis","type":"exact"}],"termid":"GO:0033352"}


id: GO:0034422
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of an aleurone grain.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle lumen","termid":"GO:0060205"},{"relation_name":"part_of","term_name":"aleurone grain","termid":"GO:0033095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"aleurone grain lumen","termid":"GO:0034422"}


id: PBO:0079369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha pseudogene 3","termid":"PBO:0079369"}


id: MONDO:0017657
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare paroxysmal movement disorder (obsolete MONDO:0017657)","secondary_identifiers":["Orphanet:306768"],"termid":"MONDO:0017657","xrefs":{"Monarch":{"xref_id":"0017657"}}}


id: PBO:0074559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 12","termid":"PBO:0074559"}


id: PBO:0082191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aldehyde reductase; reduces aliphatic aldehyde substrates using NADH as cofactor; shown to reduce carbonyl compounds to chiral alcohols","termid":"PBO:0082191"}


id: PBO:0056751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"METTL5 pseudogene 2","termid":"PBO:0056751"}


id: PBO:0062124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily D member 2","termid":"PBO:0062124"}


id: FYPO:0002822
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle pole body is decreased during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to mitotic spindle pole body","termid":"FYPO:0000940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to mitotic spindle pole body during mitosis","synonyms":[{"name":"decreased protein localisation to mitotic spindle pole body during mitosis","type":"exact"},{"name":"decreased protein localization to mitotic SPB during mitosis","type":"exact"},{"name":"decreased protein localization to mitotic spindle pole body during M-phase","type":"related"},{"name":"decreased protein localization to mitotic spindle pole body during mitotic M phase","type":"related"},{"name":"decreased protein localization to mitotic spindle pole body during mitotic nuclear division","type":"exact"},{"name":"decreased protein localization to spindle pole body during mitosis during vegetative growth","type":"exact"},{"name":"reduced protein localization to mitotic spindle pole body during mitosis","type":"exact"}],"termid":"FYPO:0002822"}


id: PBO:0080510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WARS2 intronic transcript 1","termid":"PBO:0080510"}


id: MONDO:0019419
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked intellectual disability-macrocephaly-macroorchidism syndrome is characterized by intellectual deficit affecting both sexes, macrocephaly, and macroorchidism in the majority of affected males. It has been described in 12 individuals from two generations of one family. Other males from this family did not display intellectual deficit but did present macroorchidism and macrocephaly. Transmission is X-linked and the causative gene has been localized to the q12-q21 region of the X chromosome.","definition_xrefs":["Orphanet:85320"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked intellectual disability-macrocephaly-macroorchidism syndrome","secondary_identifiers":["GARD:19055","MEDGEN:930075","SCTID:719825000","UMLS:C4304406"],"synonyms":[{"name":"Johnson syndrome","type":"exact"}],"termid":"MONDO:0019419","xrefs":{"Monarch":{"xref_id":"0019419"}}}


id: GO:1902552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of catalase activity.","definition_xrefs":["PMID:24285797","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of catalase activity (obsolete GO:1902552)","synonyms":[{"name":"down regulation of CAT","type":"related"},{"name":"down regulation of bacterial catalase-peroxidase activity","type":"narrow"},{"name":"down regulation of caperase activity","type":"exact"},{"name":"down regulation of catalase activity","type":"exact"},{"name":"down regulation of catalase reaction","type":"exact"},{"name":"down regulation of catalase-peroxidase activity","type":"exact"},{"name":"down regulation of equilase activity","type":"exact"},{"name":"down regulation of haem catalase activity","type":"narrow"},{"name":"down regulation of heme catalase activity","type":"narrow"},{"name":"down regulation of hydrogen-peroxide:hydrogen-peroxide oxidoreductase activity","type":"exact"},{"name":"down regulation of manganese catalase activity","type":"narrow"},{"name":"down regulation of optidase activity","type":"exact"},{"name":"down-regulation of CAT","type":"related"},{"name":"down-regulation of bacterial catalase-peroxidase activity","type":"narrow"},{"name":"down-regulation of caperase activity","type":"exact"},{"name":"down-regulation of catalase activity","type":"exact"},{"name":"down-regulation of catalase reaction","type":"exact"},{"name":"down-regulation of catalase-peroxidase activity","type":"exact"},{"name":"down-regulation of equilase activity","type":"exact"},{"name":"down-regulation of haem catalase activity","type":"narrow"},{"name":"down-regulation of heme catalase activity","type":"narrow"},{"name":"down-regulation of hydrogen-peroxide:hydrogen-peroxide oxidoreductase activity","type":"exact"},{"name":"down-regulation of manganese catalase activity","type":"narrow"},{"name":"down-regulation of optidase activity","type":"exact"},{"name":"downregulation of CAT","type":"related"},{"name":"downregulation of bacterial catalase-peroxidase activity","type":"narrow"},{"name":"downregulation of caperase activity","type":"exact"},{"name":"downregulation of catalase activity","type":"exact"},{"name":"downregulation of catalase reaction","type":"exact"},{"name":"downregulation of catalase-peroxidase activity","type":"exact"},{"name":"downregulation of equilase activity","type":"exact"},{"name":"downregulation of haem catalase activity","type":"narrow"},{"name":"downregulation of heme catalase activity","type":"narrow"},{"name":"downregulation of hydrogen-peroxide:hydrogen-peroxide oxidoreductase activity","type":"exact"},{"name":"downregulation of manganese catalase activity","type":"narrow"},{"name":"downregulation of optidase activity","type":"exact"},{"name":"inhibition of CAT","type":"related"},{"name":"inhibition of bacterial catalase-peroxidase activity","type":"narrow"},{"name":"inhibition of caperase activity","type":"narrow"},{"name":"inhibition of catalase activity","type":"narrow"},{"name":"inhibition of catalase reaction","type":"narrow"},{"name":"inhibition of catalase-peroxidase activity","type":"narrow"},{"name":"inhibition of equilase activity","type":"narrow"},{"name":"inhibition of haem catalase activity","type":"narrow"},{"name":"inhibition of heme catalase activity","type":"narrow"},{"name":"inhibition of hydrogen-peroxide:hydrogen-peroxide oxidoreductase activity","type":"narrow"},{"name":"inhibition of manganese catalase activity","type":"narrow"},{"name":"inhibition of optidase activity","type":"narrow"},{"name":"negative regulation of CAT","type":"related"},{"name":"negative regulation of bacterial catalase-peroxidase activity","type":"narrow"},{"name":"negative regulation of caperase activity","type":"exact"},{"name":"negative regulation of catalase reaction","type":"exact"},{"name":"negative regulation of catalase-peroxidase activity","type":"exact"},{"name":"negative regulation of equilase activity","type":"exact"},{"name":"negative regulation of haem catalase activity","type":"narrow"},{"name":"negative regulation of heme catalase activity","type":"narrow"},{"name":"negative regulation of hydrogen-peroxide:hydrogen-peroxide oxidoreductase activity","type":"exact"},{"name":"negative regulation of manganese catalase activity","type":"narrow"},{"name":"negative regulation of optidase activity","type":"exact"}],"termid":"GO:1902552"}


id: PR:O43007
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ade9 gene.","definition_xrefs":["UniProtKB:O43007","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-1-tetrahydrofolate synthase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G2.08","synonyms":[{"name":"C1-THF synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ade9","type":"exact"}],"termid":"PR:O43007"}


id: GO:0046721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of formic acid, HCOOH, by a cell or a tissue.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formate transport","termid":"GO:0015724"},{"relation_name":"is_a","term_name":"acid secretion","termid":"GO:0046717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"formic acid secretion","synonyms":[{"name":"formate secretion","type":"exact"}],"termid":"GO:0046721"}


id: GO:0017039
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of an N-terminal dipeptide from a peptide comprising four or more residues, with broad specificity; also acts on dipeptidyl 2-naphthylamides.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete dipeptidyl-peptidase III activity (obsolete GO:0017039)","synonyms":[{"name":"DPP III activity","type":"related"},{"name":"dipeptidyl aminopeptidase III activity","type":"related"},{"name":"dipeptidyl arylamidase III activity","type":"related"},{"name":"dipeptidyl-peptidase III activity","type":"exact"},{"name":"enkephalinase B activity","type":"narrow"},{"name":"red cell angiotensinase activity","type":"narrow"}],"termid":"GO:0017039"}


id: PBO:0060974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFYC pseudogene 1","termid":"PBO:0060974"}


id: FYPO:0000560
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which re-entry into the mitotic cell cycle after pheromone arrest is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell cycle process","termid":"FYPO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal re-entry into mitotic cell cycle after pheromone arrest","synonyms":[{"name":"normal recovery from pheromone-induced cell cycle arrest","type":"exact"},{"name":"recovery from pheromone-induced cell cycle arrest: normal","type":"related"}],"termid":"FYPO:0000560"}


id: GO:0014006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of microglia differentiation, the process in which a relatively unspecialized cell acquires specialized features of a microglial cell.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macrophage differentiation","termid":"GO:0045649"},{"relation_name":"is_a","term_name":"regulation of glial cell differentiation","termid":"GO:0045685"},{"relation_name":"regulates","term_name":"microglia differentiation","termid":"GO:0014004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of microglia differentiation","synonyms":[{"name":"regulation of microglial cell differentiation","type":"exact"}],"termid":"GO:0014006"}


id: GO:1904942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiac ventricle formation.","definition_xrefs":["PMID:23575307","GOC:BHF_miRNA","GOC:TermGenie","GO_REF:0000058","GOC:BHF","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardiac chamber formation","termid":"GO:1901210"},{"relation_name":"regulates","term_name":"cardiac ventricle formation","termid":"GO:0003211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac ventricle formation","termid":"GO:1904942"}


id: MONDO:0013174
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary ciliary dyskinesia in which the cause of the disease is a mutation in the DNAAF1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary ciliary dyskinesia 13","secondary_identifiers":["OMIM:613193","UMLS:C2750790","MEDGEN:413399","MESH:C567713","GARD:15628","DOID:0110618"],"synonyms":[{"name":"CILD13","type":"exact"},{"name":"DNAAF1 primary ciliary dyskinesia","type":"exact"},{"name":"ciliary dyskinesia, primary, 13","type":"related"},{"name":"ciliary dyskinesia, primary, 13, with or without situs inversus","type":"related"},{"name":"ciliary dyskinesia, primary, type 13","type":"exact"},{"name":"primary ciliary dyskinesia 13","type":"exact"},{"name":"primary ciliary dyskinesia 13 with or without situs inversus","type":"exact"},{"name":"primary ciliary dyskinesia caused by mutation in DNAAF1","type":"exact"},{"name":"primary ciliary dyskinesia type 13","type":"exact"}],"termid":"MONDO:0013174","xrefs":{"Monarch":{"xref_id":"0013174"}}}


id: PBO:0027048
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_number_of_Crb2_foci_during_cellular_response_to_ionizing_radiation","termid":"PBO:0027048"}


id: PR:Q9HGQ3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cis4 gene.","definition_xrefs":["UniProtKB:Q9HGQ3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc transporter cis4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17D4.03c","synonyms":[{"name":"Spom972h-cis4","type":"exact"}],"termid":"PR:Q9HGQ3"}


id: GO:0050508
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-O-{[(1->4)-beta-D-GlcA-(1->4)-alpha-D-GlcNAc](n)-(1->4)-beta-D-GlcA-(1->3)-beta-D-Gal-(1->3)-beta-D-Gal-(1->4)-beta-D-Xyl}-L-seryl-[protein] + UDP-N-acetyl-alpha-D-glucosamine = 3-O-{alpha-D-GlcNAc-[(1->4)-beta-D-GlcA-(1->4)-alpha-D-GlcNAc](n)-(1->4)-beta-D-GlcA-(1->3)-beta-D-Gal-(1->3)-beta-D-Gal-(1->4)-beta-D-Xyl}-L-seryl-[protein] + H+ + UDP.","definition_xrefs":["EC:2.4.1.224","RHEA:16213","MetaCyc:2.4.1.224-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity","secondary_identifiers":["Reactome:R-HSA-9036283","Reactome:R-HSA-3656261","Reactome:R-HSA-2022851","Reactome:R-HSA-3656254","Reactome:R-HSA-9036290","Reactome:R-HSA-2022919"],"synonyms":[{"name":"UDP-N-acetyl-D-glucosamine:beta-D-glucuronosyl-(1->4)-N-acetyl-alpha-D-glucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity","type":"related"},{"name":"alpha-N-acetylglucosaminyltransferase II activity","type":"related"},{"name":"glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-a-N-acetylglucosaminyltransferase activity","type":"exact"},{"name":"glucuronyl-N-acetylglucosaminylproteoglycan alpha-1,4-N-acetylglucosaminyltransferase activity","type":"related"}],"termid":"GO:0050508"}


id: PBO:0087109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal protein P2 beta; a component of the ribosomal stalk, which is involved in the interaction between translational elongation factors and the ribosome; free (non-ribosomal) P2 stimulates the phosphorylation of the eIF2 alpha subunit (Sui2p) by Gcn2p; regulates the accumulation of P1 (Rpp1Ap and Rpp1Bp) in the cytoplasm","termid":"PBO:0087109"}


id: GO:0034560
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: bisphenol A + NADH + H+ + O2 = 2,2-bis(4-hydroxyphenyl)-1-propanol + NAD+ + H2O.","definition_xrefs":["UM-BBD_reactionID:r0861"],"gene_count":0,"genotype_count":0,"name":"obsolete bisphenol A hydroxylase A activity (obsolete GO:0034560)","termid":"GO:0034560"}


id: PBO:0012231
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"swi5delta rhp57delta double mutant showed a repair profile very similar to that of the rhp51delta single mutant","termid":"PBO:0012231"}


id: PBO:0002756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA family ATPase Rvb1","termid":"PBO:0002756"}


id: MONDO:0013503
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial chronic mucocutaneous candidiasis in which the cause of the disease is a mutation in the IL17F gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic mucocutaneous candidiasis","termid":"MONDO:0015279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"candidiasis, familial, 6","secondary_identifiers":["GARD:15093","MEDGEN:462755","UMLS:C3151405","OMIM:613956"],"synonyms":[{"name":"CANDF6","type":"related"},{"name":"IL17F familial chronic mucocutaneous candidiasis","type":"exact"},{"name":"candidiasis, familial chronic mucocutaneous, autosomal dominant","type":"related"},{"name":"candidiasis, familial, 6","type":"exact"},{"name":"candidiasis, familial, 6, autosomal dominant","type":"exact"},{"name":"candidiasis, familial, type 6","type":"exact"},{"name":"familial chronic mucocutaneous candidiasis caused by mutation in IL17F","type":"exact"}],"termid":"MONDO:0013503","xrefs":{"Monarch":{"xref_id":"0013503"}}}


id: _global:has_quality
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"a relation between an independent continuant (the bearer) and a quality, in which the quality specifically depends on the bearer for its existence","direct_ancestors":[{"relation_name":"is_a","term_name":"has_characteristic","termid":"_global:has_characteristic"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_quality","secondary_identifiers":["RO:0000086"],"termid":"_global:has_quality"}


id: MONDO:0018407
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete male infertility due to obstructive azoospermia of genetic origin (obsolete MONDO:0018407)","secondary_identifiers":["Orphanet:399998"],"synonyms":[{"name":"Male infertility due to impaired sperm transport of genetic origin","type":"exact"}],"termid":"MONDO:0018407","xrefs":{"Monarch":{"xref_id":"0018407"}}}


id: GO:0042153
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to proteins with similar structure/function to receptor protein tyrosine phosphatases.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete RPTP-like protein binding (obsolete GO:0042153)","synonyms":[{"name":"RPTP-like protein binding","type":"exact"},{"name":"receptor protein tyrosine phosphatase-like protein binding","type":"exact"}],"termid":"GO:0042153"}


id: MONDO:0010320
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the OFD1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005328","MONDO:0005066"],"is_obsolete":false,"name":"retinitis pigmentosa 23","secondary_identifiers":["DOID:0110412","OMIM:300424","GARD:10391","MEDGEN:238456","UMLS:C1419610","ICD10CM:H35.5"],"synonyms":[{"name":"OFD1 retinitis pigmentosa","type":"exact"},{"name":"RP 23","type":"related"},{"name":"RP23","type":"exact"},{"name":"retinitis pigmentosa 23","type":"exact"},{"name":"retinitis pigmentosa 23, X-linked recessive","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in OFD1","type":"exact"},{"name":"retinitis pigmentosa type 23","type":"exact"}],"termid":"MONDO:0010320","xrefs":{"Monarch":{"xref_id":"0010320"}}}


id: PBO:0077722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNR intronic transcript 1","termid":"PBO:0077722"}


id: PR:000028949
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A thioredoxin oxidized form in Schizosaccharomyces pombe. The disulfide bond involves Cys-30 and Cys-33 in UniProtKB:O14463.","definition_xrefs":["PMID:22245228","PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trx1/Ox+","pombase_gene_id":"SPAC7D4.07c","synonyms":[{"name":"PomBase_original_PRO_term_name: thioredoxin-1 oxidized form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-TXN/Ox+","type":"exact"},{"name":"trx1/Ox+","type":"exact"}],"termid":"PR:000028949"}


id: PBO:0046299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"empty spiracles homeobox 2","termid":"PBO:0046299"}


id: MONDO:0007179
data:
  {"annotated_genes":["SJAG_03850","SJAG_01787","SJAG_04810","SJAG_00610","SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88444],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013767"},{"annotations":[87603,87602],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:8000024"},{"annotations":[88322],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008218"},{"annotations":[87971],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013276"}]},"cv_name":"mondo","definition":"A disorder resulting from loss of function or tissue destruction of an organ or multiple organs, arising from humoral or cellular immune responses of the individual to their own tissue constituents. It may be systemic (e.g., systemic lupus erythematosus), or organ specific, (e.g., thyroiditis).","definition_xrefs":["NCIT:C2889"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hypersensitivity reaction disease","termid":"MONDO:0000605"},{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00610":null,"SJAG_01787":null,"SJAG_03453":null,"SJAG_03850":null,"SJAG_04810":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"autoimmune disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0004364","EFO:0005809","ICD9:720","ICD9:279.4","OBI:1110054","MESH:D001327","SCTID:85828009","DOID:417","ICD9:279.49","MEDGEN:2135","OMIM:109100"],"synonyms":[{"name":"autoimmune disease","type":"exact"},{"name":"autoimmune disease or disorder","type":"exact"},{"name":"autoimmune disorder","type":"exact"},{"name":"autoimmune hypersensitivity disease","type":"related"},{"name":"disease, autoimmune","type":"exact"},{"name":"hypersensitivity reaction type II disease","type":"related"}],"termid":"MONDO:0007179","terms_by_termid":{"MONDO:0008218":null,"MONDO:0013276":null,"MONDO:0013767":null,"MONDO:8000024":null},"xrefs":{"Monarch":{"xref_id":"0007179"}}}


id: GO:0042397
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of phosphagen, any of a group of guanidine phosphates that occur in muscle and can be used to regenerate ATP from ADP during muscular contraction.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphagen metabolic process","termid":"GO:0006599"},{"relation_name":"is_a","term_name":"modified amino acid catabolic process","termid":"GO:0042219"},{"relation_name":"is_a","term_name":"organophosphate catabolic process","termid":"GO:0046434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phosphagen catabolic process","synonyms":[{"name":"phosphagen breakdown","type":"exact"},{"name":"phosphagen catabolism","type":"exact"},{"name":"phosphagen degradation","type":"exact"}],"termid":"GO:0042397"}


id: PR:O94623
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA repair protein REV1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11076:SF13","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein rev1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1347.01c","secondary_identifiers":["UniProtKB:O94623"],"synonyms":[{"name":"SPBC1347.01c","type":"related"},{"name":"Spom972h-REV1","type":"exact"},{"name":"reversionless protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94623"}


id: PBO:0080329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 93 pseudogene","termid":"PBO:0080329"}


id: PBO:0026705
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_tryptophan_level","termid":"PBO:0026705"}


id: PBO:0064168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group IVE","termid":"PBO:0064168"}


id: PBO:0078544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 36","termid":"PBO:0078544"}


id: PBO:0058438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5002","termid":"PBO:0058438"}


id: PBO:0017610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat protein, human PPP1R16A ortholog","termid":"PBO:0017610"}


id: PBO:0091086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane insertase Oxa101","termid":"PBO:0091086"}


id: PBO:0089337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi to ER retrograde transport protein","termid":"PBO:0089337"}


id: MONDO:0016945
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosome 8p duplication is a chromosome abnormality that occurs when there is an extra copy of genetic material on the short arm (p) of chromosome 8. The severity of the condition and the signs and symptoms depend on the size and location of the duplication and which genes are involved. Features that often occur in people with chromosome 8p duplication include developmental delay, intellectual disability, behavioral problems and distinctive facial features. Most cases are not inherited, but people can pass the duplication on to their children. Treatment is based on the signs and symptoms present in each person.","definition_xrefs":["GARD:0005361"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of chromosome 8","termid":"MONDO:0016929"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of the short arm of chromosome 8","secondary_identifiers":["MEDGEN:1632060","Orphanet:262758","UMLS:C4708597","icd11.foundation:1325415519","GARD:5361"],"synonyms":[{"name":"8p duplication","type":"related"},{"name":"8p trisomy","type":"related"},{"name":"Duplication 8p","type":"related"},{"name":"chromosome 8p duplication","type":"related"},{"name":"partial duplication of chromosome 8p","type":"exact"},{"name":"partial duplication of the short arm of chromosome type 8","type":"exact"},{"name":"partial trisomy 8p","type":"related"},{"name":"partial trisomy of chromosome 8p","type":"exact"},{"name":"partial trisomy of the short arm of chromosome 8","type":"exact"},{"name":"trisomy 8p","type":"related"}],"termid":"MONDO:0016945","xrefs":{"Monarch":{"xref_id":"0016945"}}}


id: GO:0004246
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of a C-terminal dipeptide, Xaa-Xbb from oligopeptide-Xaa-Xbb, when Xaa is not Pro, and Xbb is neither Asp nor Glu. Converts angiotensin I to angiotensin II.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-dipeptidase A activity (obsolete GO:0004246)","synonyms":[{"name":"ACE activity","type":"broad"},{"name":"peptidyl-dipeptidase A activity","type":"exact"}],"termid":"GO:0004246"}


id: PBO:0050473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox A1","termid":"PBO:0050473"}


id: PR:G2TRL4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- prl65 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRL4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein prl65 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19A8.16","synonyms":[{"name":"Spom972h-prl65","type":"exact"}],"termid":"PR:G2TRL4"}


id: PBO:0027579
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_level_of_transposon-derived_cDNA_in_cell","termid":"PBO:0027579"}


id: MONDO:0044629
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"arthrogryposis syndrome","termid":"MONDO:0015225"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital amyoplasia","secondary_identifiers":["Orphanet:488586","UMLS:C0812412","MEDGEN:678346","GARD:22002"],"synonyms":[{"name":"amyoplasia congenita","type":"exact"}],"termid":"MONDO:0044629","xrefs":{"Monarch":{"xref_id":"0044629"}}}


id: GO:0033093
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A large, elongated, rod-shaped secretory granule characteristic of vascular endothelial cells that contain a number of structurally and functionally distinct proteins, of which the best characterized are von Willebrand factor (VWF) and P-selectin. Weibel-Palade bodies are formed from the trans-Golgi network in a process that depends on VWF, which is densely packed in a highly organized manner, and on coat proteins that remain associated with the granules. Upon cell stimulation, regulated exocytosis releases the contained proteins to the cell surface, where they act in the recruitment of platelets and leukocytes and in inflammatory and vasoactive responses.","definition_xrefs":["PMID:11935287","PMID:16087708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clathrin-coated vesicle","termid":"GO:0030136"},{"relation_name":"is_a","term_name":"secretory granule","termid":"GO:0030141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"Weibel-Palade body","secondary_identifiers":["Wikipedia:Weibel-Palade_body"],"termid":"GO:0033093"}


id: GO:1900196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of penicillin biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of penicillin metabolic process","termid":"GO:0033244"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"penicillin biosynthetic process","termid":"GO:0042318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of penicillin biosynthetic process","synonyms":[{"name":"regulation of penicillin anabolism","type":"exact"},{"name":"regulation of penicillin biosynthesis","type":"exact"},{"name":"regulation of penicillin formation","type":"exact"},{"name":"regulation of penicillin synthesis","type":"exact"}],"termid":"GO:1900196"}


id: MONDO:0007806
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hypotrichosis 4 (obsolete MONDO:0007806)","termid":"MONDO:0007806","xrefs":{"Monarch":{"xref_id":"0007806"}}}


id: PBO:0113319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in the nonsense-mediated mRNA decay (NMD) pathway; acts as a scaffold protein bridging Nam7p and Upf3p; involved in telomere maintenance; contains an acidic domain and three middle domains of eukaryotic initiation factor 4G (mIF4G) with aspartic 59 of mIF4G-1 important for NMD activity and translation termination accuracy","termid":"PBO:0113319"}


id: FYPO:0001520
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A molecular function phenotype in which the observed rate of gamma-glutamyltransferase activity is increased.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete increased gamma-glutamyltransferase activity (obsolete FYPO:0001520)","synonyms":[{"name":"increased GGT activity","type":"broad"},{"name":"increased gamma-glutamyl transpeptidase activity","type":"exact"}],"termid":"FYPO:0001520"}


id: GO:0019974
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to interleukin-14.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete interleukin-14 binding (obsolete GO:0019974)","synonyms":[{"name":"IL-14 binding","type":"exact"}],"termid":"GO:0019974"}


id: MONDO:0011532
data:
  {"annotated_genes":["SJAG_00564"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88871],"is_not":false,"summary":null,"term":"MONDO:0011532"}]},"cv_name":"mondo","definition":"Any hereditary spastic paraplegia in which the cause of the disease is a mutation in the HSPD1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00564":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 13","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:344289","MESH:C537485","Orphanet:100994","GARD:9616","UMLS:C1854467","OMIM:605280","DOID:0110766"],"synonyms":[{"name":"HSPD1 hereditary spastic paraplegia","type":"exact"},{"name":"SPG13","type":"exact"},{"name":"autosomal dominant spastic paraplegia 13","type":"exact"},{"name":"autosomal dominant spastic paraplegia type 13","type":"related"},{"name":"hereditary spastic paraplegia caused by mutation in HSPD1","type":"exact"},{"name":"hereditary spastic paraplegia type 13","type":"exact"},{"name":"spastic paraplegia 13","type":"related"},{"name":"spastic paraplegia 13, autosomal dominant","type":"related"}],"termid":"MONDO:0011532","terms_by_termid":{"MONDO:0011532":null},"xrefs":{"Monarch":{"xref_id":"0011532"}}}


id: GO:0009661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the chromoplast. A chromoplast is a plastid containing pigments other than chlorophyll, usually yellow and orange carotenoid pigments.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid organization","termid":"GO:0009657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chromoplast organization","synonyms":[{"name":"chromoplast organisation","type":"exact"},{"name":"chromoplast organization and biogenesis","type":"related"}],"termid":"GO:0009661"}


id: GO:0071689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of proteins to form the actin-based thin filaments of myofibrils in striated muscle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament organization","termid":"GO:0007015"},{"relation_name":"part_of","term_name":"myofibril assembly","termid":"GO:0030239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0030036","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"muscle thin filament assembly","termid":"GO:0071689"}


id: MONDO:0021016
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A disease caused by disturbed function of ion channel subunits or the proteins that regulate them.","definition_xrefs":["Wikipedia:Channelopathy"],"gene_count":0,"genotype_count":0,"name":"obsolete channelopathy (obsolete MONDO:0021016)","secondary_identifiers":["MESH:D053447"],"synonyms":[{"name":"disorder of ion channel activity","type":"exact"},{"name":"ion channel activity disease","type":"exact"}],"termid":"MONDO:0021016","xrefs":{"Monarch":{"xref_id":"0021016"}}}


id: PBO:0042359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD101 antisense RNA 1","termid":"PBO:0042359"}


id: MONDO:0014968
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian encephalopathy","termid":"MONDO:0100198"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"encephalopathy, progressive, with amyotrophy and optic atrophy","secondary_identifiers":["UMLS:C4310667","OMIM:617207","MEDGEN:934634"],"synonyms":[{"name":"PEAMO","type":"exact"},{"name":"encephalopathy, progressive, with amyotrophy and optic atrophy","type":"exact"},{"name":"encephalopathy, progressive, with amyotrophy and optic atrophy; PEAMO","type":"exact"}],"termid":"MONDO:0014968","xrefs":{"Monarch":{"xref_id":"0014968"}}}


id: PBO:0069733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1014, pseudogene","termid":"PBO:0069733"}


id: GO:0140313
data:
  {"annotated_genes":["SJAG_00642","SJAG_02576","SJAG_04873","SJAG_02266","SJAG_04682","SJAG_00145","SJAG_01078","SJAG_02474","SJAG_01803","SJAG_00436","SJAG_00822","SJAG_01993","SJAG_02857"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[116185],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003788"},{"annotations":[109255,96981,102310,102361,106834,89449,92028,97043,113574],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140311"},{"annotations":[106756],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140610"},{"annotations":[95586,95587],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140486"}]},"cv_name":"molecular_function","definition":"Binding to a specific molecule to prevent it from interacting with other partners or to inhibit its localization to the area of the cell or complex where it is active.","definition_xrefs":["PMID:13130076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_function","termid":"GO:0003674"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00145":null,"SJAG_00436":null,"SJAG_00642":null,"SJAG_00822":null,"SJAG_01078":null,"SJAG_01803":null,"SJAG_01993":null,"SJAG_02266":null,"SJAG_02474":null,"SJAG_02576":null,"SJAG_02857":null,"SJAG_04682":null,"SJAG_04873":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"molecular sequestering activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-203553","Reactome:R-HSA-203680","Reactome:R-HSA-3245898"],"termid":"GO:0140313","terms_by_termid":{"GO:0003788":null,"GO:0140311":null,"GO:0140486":null,"GO:0140610":null}}


id: PR:O59711
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC3B8.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59711"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"saccharopine dehydrogenase [NADP(+), L-glutamate-forming] (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B8.03","synonyms":[{"name":"Spom972h-SPBC3B8.03","type":"exact"},{"name":"saccharopine reductase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59711"}


id: MONDO:0030989
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 53","secondary_identifiers":["MEDGEN:1787013","DOID:0112279","OMIM:619258","UMLS:C5543253"],"synonyms":[{"name":"SPGF53","type":"exact"},{"name":"spermatogenic failure 53","type":"exact"}],"termid":"MONDO:0030989","xrefs":{"Monarch":{"xref_id":"0030989"}}}


id: GO:1905095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of apolipoprotein A-I-mediated signaling pathway.","definition_xrefs":["GOC:bc","GOC:BHF","PMID:25084135","GOC:TermGenie","GOC:BHF_miRNA","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of apolipoprotein A-I-mediated signaling pathway","termid":"GO:1905094"},{"relation_name":"negatively_regulates","term_name":"apolipoprotein A-I-mediated signaling pathway","termid":"GO:0038027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of apolipoprotein A-I-mediated signaling pathway","synonyms":[{"name":"down regulation of apolipoprotein A-I-mediated signaling pathway","type":"exact"},{"name":"down regulation of apolipoprotein A-I-mediated signalling pathway","type":"exact"},{"name":"down-regulation of apolipoprotein A-I-mediated signaling pathway","type":"exact"},{"name":"down-regulation of apolipoprotein A-I-mediated signalling pathway","type":"exact"},{"name":"downregulation of apolipoprotein A-I-mediated signaling pathway","type":"exact"},{"name":"downregulation of apolipoprotein A-I-mediated signalling pathway","type":"exact"},{"name":"inhibition of apolipoprotein A-I-mediated signaling pathway","type":"narrow"},{"name":"inhibition of apolipoprotein A-I-mediated signalling pathway","type":"narrow"},{"name":"negative regulation of apolipoprotein A-I-mediated signalling pathway","type":"exact"}],"termid":"GO:1905095"}


id: GO:0018487
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: vanillate + Co+ = Co3+-CH3 + 3,4-dihydroxybenzoate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete vanillate O-demethylase (anaerobic) activity (obsolete GO:0018487)","termid":"GO:0018487"}


id: MONDO:0002427
data:
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id: PBO:0052752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 44","termid":"PBO:0052752"}


id: MONDO:0042499
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete benign familial neonatal-infantile seizures (obsolete MONDO:0011140)","termid":"MONDO:0011140"},{"relation_name":"is_a","term_name":"benign familial infantile epilepsy","termid":"MONDO:0017615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"benign familial neonatal-infantile seizures 1","secondary_identifiers":["DOID:0081114","MEDGEN:1638448","UMLS:C4551769","OMIM:601764","GARD:856"],"synonyms":[{"name":"BFIC1","type":"related"},{"name":"BFIS1","type":"related"},{"name":"benign familial infantile convulsions syndrome","type":"related"},{"name":"benign familial infantile convulsions syndrome 1","type":"related"},{"name":"benign infantile familial convulsions","type":"related"},{"name":"benign infantile familial convulsions 1","type":"related"},{"name":"convulsions, benign familial infantile, 1","type":"related"},{"name":"seizures, benign familial infantile, 1","type":"related"}],"termid":"MONDO:0042499","xrefs":{"Monarch":{"xref_id":"0042499"}}}


id: MONDO:0020641
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  {"annotated_genes":["SJAG_03689","SJAG_00229","SJAG_03453","SJAG_04114"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88601,89153,88600],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008903"},{"annotations":[88138],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011014"}]},"cv_name":"mondo","definition":"A benign or malignant, primary or metastatic neoplasm involving the respiratory tract.","definition_xrefs":["NCIT:C3355"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"},{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00229":null,"SJAG_03453":null,"SJAG_03689":null,"SJAG_04114":null},"genotype_count":0,"is_obsolete":false,"name":"respiratory tract neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["EFO:0003853","SCTID:126667002","MESH:D012142","MEDGEN:11200","UMLS:C0035244","ICD10CM:C30-C39"],"synonyms":[{"name":"neoplasm of respiratory tract","type":"exact"},{"name":"neoplasm of the respiratory tract","type":"exact"},{"name":"neoplasm, respiratory tract","type":"exact"},{"name":"neoplasms, respiratory tract","type":"exact"},{"name":"respiratory system neoplasm","type":"exact"},{"name":"respiratory tract neoplasm","type":"exact"},{"name":"respiratory tract tumor","type":"exact"},{"name":"respiratory tract tumour","type":"exact"},{"name":"tract neoplasm, respiratory","type":"exact"},{"name":"tract neoplasms, respiratory","type":"exact"},{"name":"tumor of respiratory tract","type":"exact"},{"name":"tumor of the respiratory tract","type":"exact"},{"name":"tumour of respiratory tract","type":"exact"},{"name":"tumour of the respiratory tract","type":"exact"}],"termid":"MONDO:0020641","terms_by_termid":{"MONDO:0008903":null,"MONDO:0011014":null},"xrefs":{"Monarch":{"xref_id":"0020641"}}}


id: FYPO:0000099
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to canavanine. Cells stop growing (and may die) at a concentration of canavanine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0002683","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to canavanine","synonyms":[{"name":"hypersensitive to canavanine","type":"exact"},{"name":"sensitive to canavanine during mitotic cell cycle","type":"related"},{"name":"sensitive to canavanine during vegetative growth","type":"exact"}],"termid":"FYPO:0000099"}


id: PBO:0002391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snoR69b (predicted)","termid":"PBO:0002391"}


id: PBO:0079825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-51 like kinase 4","termid":"PBO:0079825"}


id: PBO:0084643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Microtubule-associated protein involved in microtubule organization; involved in assembly and stabilization of microtubules; overproduction results in cell cycle arrest at G2 phase; similar to Drosophila protein MAP and to mammalian MAP4 proteins","termid":"PBO:0084643"}


id: MONDO:0003607
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neuritis that involves the forelimb.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"mononeuritis simplex","termid":"MONDO:0002121"},{"relation_name":"is_a","term_name":"neuritis","termid":"MONDO:0002122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"neuritis of upper limb","secondary_identifiers":["DOID:572","UMLS:C0154741","MEDGEN:509640","ICD9:354"],"synonyms":[{"name":"forelimb neuritis","type":"exact"},{"name":"neuritis of forelimb","type":"exact"}],"termid":"MONDO:0003607","xrefs":{"Monarch":{"xref_id":"0003607"}}}


id: GO:0017145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The self-renewing division of a stem cell. A stem cell is an undifferentiated cell, in the embryo or adult, that can undergo unlimited division and give rise to one or several different cell types.","definition_xrefs":["ISBN:0582227089","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell division","termid":"GO:0051301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stem cell division","synonyms":[{"name":"stem cell renewal","type":"exact"}],"termid":"GO:0017145"}


id: GO:0031799
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 2 metabotropic glutamate receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled glutamate receptor binding","termid":"GO:0035256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"type 2 metabotropic glutamate receptor binding","synonyms":[{"name":"type 2 metabotropic glutamate receptor ligand","type":"narrow"}],"termid":"GO:0031799"}


id: PBO:0056085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphocyte antigen 86","termid":"PBO:0056085"}


id: MONDO:0000205
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete radioulnar synostosis with amegakaryocytic thrombocytopenia (obsolete MONDO:0000205)","termid":"MONDO:0000205","xrefs":{"Monarch":{"xref_id":"0000205"}}}


id: GO:0018676
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (4S)-limonene + O2 + reduced [NADPH--hemoprotein reductase] = (4S)-perillyl alcohol + H+ + H2O + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:23432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"},{"relation_name":"is_a","term_name":"limonene monooxygenase activity","termid":"GO:0019113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"(S)-limonene 7-monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R02470","UM-BBD_reactionID:r0728","MetaCyc:--LIMONENE-7-MONOOXYGENASE-RXN","EC:1.14.14.52"],"synonyms":[{"name":"(-)-limonene 7-monooxygenase activity","type":"exact"}],"termid":"GO:0018676"}


id: PBO:0070647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 18","termid":"PBO:0070647"}


id: PBO:0075570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindlin 1","termid":"PBO:0075570"}


id: GO:1990072
data:
  {"annotated_genes":["SJAG_00850","SJAG_03467","SJAG_04021","SJAG_02655","SJAG_00820","SJAG_04837","SJAG_02525","SJAG_01415"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[75097,76839,79411,90476,99118,100917,104351,111672],"is_not":false,"summary":null,"term":"GO:1990072"}]},"cv_name":"cellular_component","definition":"A complex that functions in anterograde transport at the Golgi and also regulates autophagy. In yeast it includes at least the following subunits: Bet3 (as homodimer), Bet5, Trs20, Trs23, Trs31, Trs33, Trs85. TRAPPIII may include further, as yet undescribed, proteins.","definition_xrefs":["GOC:bhm","PMID:22669257","PMID:20375281"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TRAPP complex","termid":"GO:0030008"},{"relation_name":"part_of","term_name":"Golgi apparatus","termid":"GO:0005794"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00820":null,"SJAG_00850":null,"SJAG_01415":null,"SJAG_02525":null,"SJAG_02655":null,"SJAG_03467":null,"SJAG_04021":null,"SJAG_04837":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005794"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005794","GO:0005575"],"is_obsolete":false,"name":"TRAPPIII protein complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:1990072","terms_by_termid":{"GO:1990072":null}}


id: GO:0051760
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The cell cycle process in which the sister chromatids of a replicated chromosome are joined along the length of the chromosome arms during meiosis.","definition_xrefs":["PMID:14730319","PMID:16325576"],"gene_count":0,"genotype_count":0,"name":"obsolete meiotic sister chromatid cohesion, arms (obsolete GO:0051760)","synonyms":[{"name":"meiotic sister chromatid cohesion along arms","type":"exact"},{"name":"sister chromatid cohesion along arms at meiosis I","type":"exact"}],"termid":"GO:0051760"}


id: PBO:0016055
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mating type Auxiliary Plus","termid":"PBO:0016055"}


id: FYPO:0005171
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of uracil into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal uracil import","termid":"FYPO:0005170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"decreased uracil import","synonyms":[{"name":"decreased uracil import across plasma membrane","type":"exact"},{"name":"decreased uracil import during mitotic cell cycle","type":"related"},{"name":"decreased uracil import during vegetative growth","type":"exact"},{"name":"decreased uracil import into cell","type":"exact"},{"name":"decreased uracil uptake","type":"exact"},{"name":"reduced uracil import","type":"exact"}],"termid":"FYPO:0005171"}


id: GO:0007570
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete age dependent accumulation of genetic damage (obsolete GO:0007570)","synonyms":[{"name":"age dependent accumulation of genetic damage","type":"exact"}],"termid":"GO:0007570"}


id: FYPO_EXT:1000001
data:
  {"annotation_feature_type":"gene","cv_name":"fypo_extensions","definition":"FYPO extension ontology grouping term for relations relevant to severity","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FYPO extension","termid":"FYPO_EXT:1000000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FYPO severity extension","termid":"FYPO_EXT:1000001"}


id: MONDO:0021230
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the uterine cervix.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cervix disorder","termid":"MONDO:0002256"},{"relation_name":"is_a","term_name":"tumor of uterus","termid":"MONDO:0021353"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uterine cervix neoplasm","secondary_identifiers":["ONCOTREE:CERVIX","UMLS:C0007873","NCIT:C2940","MEDGEN:40201"],"synonyms":[{"name":"Cervical neoplasm","type":"exact"},{"name":"cervical tumor","type":"exact"},{"name":"cervical tumour","type":"exact"},{"name":"cervix","type":"related"},{"name":"cervix neoplasm","type":"exact"},{"name":"cervix tumor","type":"exact"},{"name":"cervix tumour","type":"exact"},{"name":"cervix uteri neoplasm","type":"exact"},{"name":"cervix uteri tumor","type":"exact"},{"name":"cervix uteri tumour","type":"exact"},{"name":"neoplasm of cervix","type":"exact"},{"name":"neoplasm of cervix uteri","type":"exact"},{"name":"neoplasm of the cervix","type":"exact"},{"name":"neoplasm of the cervix uteri","type":"exact"},{"name":"neoplasm of the uterine cervix","type":"exact"},{"name":"neoplasm of uterine cervix","type":"exact"},{"name":"tumor of cervix","type":"exact"},{"name":"tumor of cervix uteri","type":"exact"},{"name":"tumor of the cervix","type":"exact"},{"name":"tumor of the cervix uteri","type":"exact"},{"name":"tumor of the uterine cervix","type":"exact"},{"name":"tumor of uterine cervix","type":"exact"},{"name":"tumour of cervix","type":"exact"},{"name":"tumour of cervix uteri","type":"exact"},{"name":"tumour of the cervix","type":"exact"},{"name":"tumour of the cervix uteri","type":"exact"},{"name":"tumour of the uterine cervix","type":"exact"},{"name":"tumour of uterine cervix","type":"exact"},{"name":"uterine cervix neoplasm (disease)","type":"exact"},{"name":"uterine cervix tumor","type":"exact"},{"name":"uterine cervix tumour","type":"exact"}],"termid":"MONDO:0021230","xrefs":{"Monarch":{"xref_id":"0021230"}}}


id: PBO:0043452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calponin 3","termid":"PBO:0043452"}


id: PBO:0029186
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_occurrence_of_activation_of_bipolar_cell_growth","termid":"PBO:0029186"}


id: PBO:0060437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NACA pseudogene 6","termid":"PBO:0060437"}


id: PBO:0061901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opioid receptor kappa 1","termid":"PBO:0061901"}


id: PBO:0061893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opsin 1, medium wave sensitive","termid":"PBO:0061893"}


id: PBO:0076751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"teratocarcinoma-derived growth factor 1 pseudogene 1","termid":"PBO:0076751"}


id: GO:1905115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lateral attachment of mitotic spindle microtubules to kinetochore.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:22375062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of attachment of mitotic spindle microtubules to kinetochore","termid":"GO:1902423"},{"relation_name":"regulates","term_name":"lateral attachment of mitotic spindle microtubules to kinetochore","termid":"GO:0099607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0000070"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0000070"],"is_obsolete":false,"name":"regulation of lateral attachment of mitotic spindle microtubules to kinetochore","termid":"GO:1905115"}


id: PR:O14010
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- srb6 gene.","definition_xrefs":["UniProtKB:O14010","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of RNA polymerase II transcription subunit 22 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29A4.07","synonyms":[{"name":"Spom972h-srb6","type":"exact"},{"name":"mediator complex subunit 22 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"suppressor of RNA polymerase B 6 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14010"}


id: PR:O74733
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cleavage and polyadenylation specificity factor subunit 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10644:SF2","OMA:SCHPO02722","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein cft1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1709.08","secondary_identifiers":["UniProtKB:O74733"],"synonyms":[{"name":"Spom972h-CPSF1","type":"exact"},{"name":"cleavage factor two protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74733"}


id: GO:0097507
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"DNA N-glycosylase activity acting on deaminated adenine (hypoxanthine).","definition_xrefs":["GOC:al","PMID:18789404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deaminated base DNA N-glycosylase activity","termid":"GO:0097506"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140097","GO:0003674","GO:0003824","GO:0016787","GO:0016798"],"is_obsolete":false,"name":"hypoxanthine DNA N-glycosylase activity","synonyms":[{"name":"hypoxanthine-DNA glycosylase activity","type":"related"}],"termid":"GO:0097507"}


id: PBO:0116649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF like GTPase 2 binding protein pseudogene 4","termid":"PBO:0116649"}


id: GO:0019692
data:
  {"annotated_genes":["SJAG_04627","SJAG_04657","SJAG_04665","SJAG_00885","SJAG_04487","SJAG_02874","SJAG_03771","SJAG_02948"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73720],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009265"},{"annotations":[109091,94251,97305],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006240"},{"annotations":[100804],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035863"},{"annotations":[72779],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006233"},{"annotations":[71649,81214],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006231"},{"annotations":[72780,94252,70216],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006235"},{"annotations":[72778],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006227"},{"annotations":[81237,71648],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006226"},{"annotations":[81238],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046081"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving deoxyribose phosphate, the phosphorylated sugar 2-deoxy-erythro-pentose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_02874":null,"SJAG_02948":null,"SJAG_03771":null,"SJAG_04487":null,"SJAG_04627":null,"SJAG_04657":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"deoxyribose phosphate metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"deoxyribose phosphate metabolism","type":"exact"}],"termid":"GO:0019692","terms_by_termid":{"GO:0006226":null,"GO:0006227":null,"GO:0006231":null,"GO:0006233":null,"GO:0006235":null,"GO:0006240":null,"GO:0009265":null,"GO:0035863":null,"GO:0046081":null}}


id: PBO:0074138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member A3","termid":"PBO:0074138"}


id: MONDO:0700050
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bacterial infectious disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infectious disease, non-human animal","termid":"MONDO:0700049"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bacterial infectious disease, non-human animal","termid":"MONDO:0700050","xrefs":{"Monarch":{"xref_id":"0700050"}}}


id: PBO:0074715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 75B","termid":"PBO:0074715"}


id: GO:0099117
data:
  {"annotated_genes":["SJAG_00851"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105568],"is_not":false,"summary":null,"term":"GO:0099117"}]},"cv_name":"biological_process","definition":"The movement of a protein along a microtubule to the cell-tip, mediated by motor proteins.","definition_xrefs":["PMID:15177031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transport along microtubule","termid":"GO:0098840"},{"relation_name":"is_a","term_name":"protein localization to cell tip","termid":"GO:1990151"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00851":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"protein transport along microtubule to cell tip","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0099117","terms_by_termid":{"GO:0099117":null}}


id: GO:0019922
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent linking of a chromophore to a protein via peptidyl-cysteines.","definition_xrefs":["GOC:ma"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-chromophore linkage via peptidyl-cysteine (obsolete GO:0019922)","termid":"GO:0019922"}


id: GO:0009062
data:
  {"annotated_genes":["SJAG_00706","SJAG_04570","SJAG_02763"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73117],"is_not":false,"summary":null,"term":"GO:0009062"},{"annotations":[74977],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001561"},{"annotations":[115623],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042758"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid metabolic process","termid":"GO:0006631"},{"relation_name":"is_a","term_name":"lipid catabolic process","termid":"GO:0016042"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00706":null,"SJAG_02763":null,"SJAG_04570":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"fatty acid catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Fatty_acid_degradation","Reactome:R-HSA-390918"],"synonyms":[{"name":"fatty acid breakdown","type":"exact"},{"name":"fatty acid catabolism","type":"exact"},{"name":"fatty acid degradation","type":"exact"}],"termid":"GO:0009062","terms_by_termid":{"GO:0001561":null,"GO:0009062":null,"GO:0042758":null}}


id: GO:0097576
data:
  {"annotated_genes":["SJAG_05184","SJAG_03347","SJAG_03386","SJAG_03137","SJAG_00029","SJAG_04966","SJAG_02433","SJAG_03915","SJAG_01072","SJAG_02384","SJAG_03072","SJAG_04909","SJAG_01324","SJAG_01299","SJAG_05194","SJAG_03011","SJAG_01598","SJAG_00330","SJAG_00380"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96131,101331,118043,119417],"is_not":false,"summary":null,"term":"GO:0097576"},{"annotations":[103277],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0061192"},{"annotations":[99439,112115],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0061191"},{"annotations":[99199],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032889"},{"annotations":[92985,102077,72898,111275,93111,102942,110122,118690,101783,102573,106467],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042144"}]},"cv_name":"biological_process","definition":"Merging of two or more vacuoles, or of vacuoles and vesicles within a cell to form a single larger vacuole.","definition_xrefs":["Wikipedia:Vacuole","GOC:pr","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuole organization","termid":"GO:0007033"},{"relation_name":"is_a","term_name":"organelle fusion","termid":"GO:0048284"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00029":null,"SJAG_00330":null,"SJAG_00380":null,"SJAG_01072":null,"SJAG_01299":null,"SJAG_01324":null,"SJAG_01598":null,"SJAG_02384":null,"SJAG_02433":null,"SJAG_03011":null,"SJAG_03072":null,"SJAG_03137":null,"SJAG_03347":null,"SJAG_03386":null,"SJAG_03915":null,"SJAG_04909":null,"SJAG_04966":null,"SJAG_05184":null,"SJAG_05194":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vacuole fusion","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0097576","terms_by_termid":{"GO:0032889":null,"GO:0042144":null,"GO:0061191":null,"GO:0061192":null,"GO:0097576":null}}


id: GO:0034107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of erythrocyte clearance.","definition_xrefs":["GOC:add","PMID:12905029","PMID:14754397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"negative regulation of tissue remodeling","termid":"GO:0034104"},{"relation_name":"is_a","term_name":"regulation of erythrocyte clearance","termid":"GO:0034106"},{"relation_name":"negatively_regulates","term_name":"erythrocyte clearance","termid":"GO:0034102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of erythrocyte clearance","synonyms":[{"name":"negative regulation of RBC clearance","type":"exact"},{"name":"negative regulation of neocytolysis","type":"narrow"},{"name":"negative regulation of red blood cell clearance","type":"exact"}],"termid":"GO:0034107"}


id: MONDO:0012630
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An Alzheimer's disease that is characterized by an associated with variation in the region 1q21.","definition_xrefs":["PMID:17564960","DOID:0110046"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset autosomal dominant Alzheimer disease","termid":"MONDO:0015140"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0002039","MONDO:0005559"],"is_obsolete":false,"name":"Alzheimer disease 13","secondary_identifiers":["GARD:16517","MESH:C567000","MEDGEN:370835","OMIM:611152","UMLS:C1970147"],"synonyms":[{"name":"AD13","type":"exact"},{"name":"Alzheimer disease 13","type":"exact"},{"name":"Alzheimer disease-13","type":"exact"},{"name":"Alzheimer's disease 13","type":"exact"},{"name":"Alzheimer's disease type 13","type":"exact"}],"termid":"MONDO:0012630","xrefs":{"Monarch":{"xref_id":"0012630"}}}


id: FYPO:0001907
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize thiamine, and therefore requires thiamine in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"growth auxotrophic for thiamine","synonyms":[{"name":"growth auxotrophic for thiamin","type":"exact"},{"name":"growth auxotrophic for thiamine during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for thiamine during vegetative growth","type":"exact"},{"name":"growth auxotrophic for vitamin B1","type":"exact"},{"name":"thiamine auxotrophy","type":"exact"}],"termid":"FYPO:0001907"}


id: FYECO:0000009
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Any experimental condition pertaining to the medium in which cells are grown.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fission yeast phenotype condition","termid":"FYECO:0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grouping growth medium","termid":"FYECO:0000009"}


id: GO:1901215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of neuron death.","definition_xrefs":["GOC:rph","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of neuron death (obsolete GO:1901215)","synonyms":[{"name":"down regulation of neuron cell death","type":"exact"},{"name":"down regulation of neuron death","type":"exact"},{"name":"down regulation of neuronal cell death","type":"exact"},{"name":"down-regulation of neuron cell death","type":"exact"},{"name":"down-regulation of neuron death","type":"exact"},{"name":"down-regulation of neuronal cell death","type":"exact"},{"name":"downregulation of neuron cell death","type":"exact"},{"name":"downregulation of neuron death","type":"exact"},{"name":"downregulation of neuronal cell death","type":"exact"},{"name":"inhibition of neuron cell death","type":"narrow"},{"name":"inhibition of neuron death","type":"narrow"},{"name":"inhibition of neuronal cell death","type":"narrow"},{"name":"negative regulation of neuron cell death","type":"exact"},{"name":"negative regulation of neuronal cell death","type":"exact"}],"termid":"GO:1901215"}


id: GO:0071271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 1-butanol, an alkyl primary alcohol with the formula C4H10O.","definition_xrefs":["GOC:mah","GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary alcohol biosynthetic process","termid":"GO:0034309"},{"relation_name":"is_a","term_name":"1-butanol metabolic process","termid":"GO:0071270"},{"relation_name":"is_a","term_name":"fatty alcohol biosynthetic process","termid":"GO:1903175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"1-butanol biosynthetic process","synonyms":[{"name":"1-butanol anabolism","type":"exact"},{"name":"1-butanol biosynthesis","type":"exact"},{"name":"1-butanol formation","type":"exact"},{"name":"1-butanol synthesis","type":"exact"},{"name":"butan-1-ol biosynthetic process","type":"exact"},{"name":"butanol biosynthetic process","type":"broad"}],"termid":"GO:0071271"}


id: GO:0016269
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The stepwise addition of carbohydrate or carbohydrate derivative residues to the initially added O-linked residue (usually GalNAc) to form the core 3 O-glycan structure, GlcNAc-beta-(1->3)-GalNAc, which ultimately forms the core 3 O-glycan structure, GlcNAc-beta-(1->6)[GalNAc-beta-(1->3)]-GalNAc.","definition_xrefs":["PMID:10580130","PMID:33775405"],"gene_count":0,"genotype_count":0,"name":"obsolete core 3 and core 4 O-glycan biosynthetic process (obsolete GO:0016269)","synonyms":[{"name":"O-glycan processing, core 3","type":"exact"},{"name":"core 3 O-glycan biosynthesis","type":"exact"}],"termid":"GO:0016269"}


id: GO:0102423
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (+)-sesaminol + UDP-alpha-D-glucose = (+)-sesaminol 2-O-beta-D-glucoside + UDP + H+.","definition_xrefs":["PMID:19561332","GOC:pz","PMID:18248594"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"(+)-sesaminol 2-O-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13818"],"termid":"GO:0102423"}


id: PBO:0044045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine and serine rich nuclear protein 2","termid":"PBO:0044045"}


id: PBO:0080103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UTP14C small subunit processome component","termid":"PBO:0080103"}


id: PBO:0035936
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_dimethylation_at_centromere_inner_repeat_during_vegetative_growth","termid":"PBO:0035936"}


id: GO:0032305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the controlled release of an icosanoid from a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of icosanoid secretion","termid":"GO:0032303"},{"relation_name":"is_a","term_name":"positive regulation of secretion","termid":"GO:0051047"},{"relation_name":"is_a","term_name":"positive regulation of fatty acid transport","termid":"GO:2000193"},{"relation_name":"positively_regulates","term_name":"icosanoid secretion","termid":"GO:0032309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of icosanoid secretion","synonyms":[{"name":"activation of icosanoid secretion","type":"narrow"},{"name":"positive regulation of eicosanoid secretion","type":"exact"},{"name":"stimulation of icosanoid secretion","type":"narrow"},{"name":"up regulation of icosanoid secretion","type":"exact"},{"name":"up-regulation of icosanoid secretion","type":"exact"},{"name":"upregulation of icosanoid secretion","type":"exact"}],"termid":"GO:0032305"}


id: MONDO:0017214
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inborn error of vitamin B12 (cobalamin) metabolism characterized by recurrent ketoacidotic comas or transient vomiting, dehydration, hypotonia and intellectual deficit, which responds to vitamin B12. There are three types: cblA, cblB and cblD-variant 2 (cblDv2).","definition_xrefs":["Orphanet:28"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete nephropathy secondary to a storage or other metabolic disease (obsolete MONDO:0019743)","termid":"MONDO:0019743"},{"relation_name":"is_a","term_name":"methylmalonic acidemia","termid":"MONDO:0002012"},{"relation_name":"is_a","term_name":"classic organic aciduria","termid":"MONDO:0019215"},{"relation_name":"is_a","term_name":"inborn disorder of cobalamin metabolism and transport","termid":"MONDO:0019220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"vitamin B12-responsive methylmalonic acidemia","secondary_identifiers":["UMLS:C0342720","GARD:12623","SCTID:69614003","MEDGEN:575193"],"synonyms":[{"name":"adenosylcobalamin deficiency","type":"exact"},{"name":"vitamin B12-responsive methylmalonic aciduria","type":"exact"}],"termid":"MONDO:0017214","xrefs":{"Monarch":{"xref_id":"0017214"}}}


id: PBO:0081559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 483","termid":"PBO:0081559"}


id: GO:0021521
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a ventral spinal cord interneuron in an environment that is neutral with respect to the developmental pathway.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:dgh","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron fate specification","termid":"GO:0048665"},{"relation_name":"is_a","term_name":"cell fate specification involved in pattern specification","termid":"GO:0060573"},{"relation_name":"part_of","term_name":"ventral spinal cord interneuron fate commitment","termid":"GO:0060579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventral spinal cord interneuron specification","termid":"GO:0021521"}


id: MONDO:0014740
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant nonsyndromic deafness in which the cause of the disease is a mutation in the HOMER2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0019497"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 68","secondary_identifiers":["GARD:18144","DOID:0110589","OMIM:616707","MEDGEN:898808","UMLS:C4225240"],"synonyms":[{"name":"DFNA68","type":"narrow"},{"name":"HOMER2 autosomal dominant nonsyndromic deafness","type":"narrow"},{"name":"autosomal dominant deafness 68","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 68","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness caused by mutation in HOMER2","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 68","type":"narrow"},{"name":"deafness, autosomal dominant 68","type":"narrow"},{"name":"deafness, autosomal dominant type 68","type":"narrow"}],"termid":"MONDO:0014740","xrefs":{"Monarch":{"xref_id":"0014740"}}}


id: GO:0106160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of small RNA loading onto RISC.","definition_xrefs":["PMID:29775584","GOC:ha"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of small RNA loading onto RISC (obsolete GO:0106160)","termid":"GO:0106160"}


id: GO:0140009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-aspartate from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GO_REF:0000069","PMID:7914198"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-aspartate transmembrane transport","termid":"GO:0070778"},{"relation_name":"is_a","term_name":"amino acid import across plasma membrane","termid":"GO:0089718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"L-aspartate import across plasma membrane","termid":"GO:0140009"}


id: MONDO:1011832
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peripheral axonopathy, non-human animal","secondary_identifiers":["OMIA:000099"],"termid":"MONDO:1011832","xrefs":{"Monarch":{"xref_id":"1011832"}}}


id: PBO:0040100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"artemin","termid":"PBO:0040100"}


id: PBO:0048294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanidinoacetate N-methyltransferase pseudogene 1","termid":"PBO:0048294"}


id: PR:O14201
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug86 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 86 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC5D6.09c","synonyms":[{"name":"Spom972h-mug86","type":"exact"}],"termid":"PR:O14201"}


id: MOD:00631
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:320"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrolyzed N-ethylmaleimide adduct","synonyms":[{"name":"Nethylmaleimide+water","type":"related"},{"name":"Nethylmaleimidehydrolysis","type":"related"}],"termid":"MOD:00631"}


id: MONDO:0007235
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Branchio-oculo-facial syndrome (BOFS) is characterized by low birth weight and growth retardation, bilateral branchial clefts that may be hemangiomatous, sometimes with linear skin lesions behind the ears ('burn-like' lesions), congenital strabismus, obstructed nasolacrimal ducts, a broad nasal bridge with a flattened nasal tip, a protruding upper lip with an unusually broad and prominent philtrum, and full mouth.","definition_xrefs":["Orphanet:1297"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"branchiooculofacial syndrome","secondary_identifiers":["ICD9:759.89","OMIM:113620","DOID:0050691","MEDGEN:91261","UMLS:C0376524","NORD:871","SCTID:449821007","GARD:3212"],"synonyms":[{"name":"BOFS","type":"exact"},{"name":"BOFS syndrome","type":"exact"},{"name":"Bof syndrome","type":"exact"},{"name":"Branchio Oculo Facial Syndrome","type":"exact"},{"name":"branchial clefts with characteristic facies growth retardation imperforate nasolacrimal duct and premature ageing","type":"exact"},{"name":"branchial clefts with characteristic facies growth retardation imperforate nasolacrimal duct and premature aging","type":"exact"},{"name":"branchial clefts with characteristic facies, growth retardation, imperforate nasolacrimal duct, and premature Ageing","type":"exact"},{"name":"branchial clefts with characteristic facies, growth retardation, imperforate nasolacrimal duct, and premature Aging","type":"exact"},{"name":"branchio-oculo-facial syndrome","type":"exact"},{"name":"branchiooculofacial syndrome","type":"exact"},{"name":"hemangiomatous branchial clefts-Lip Pseudocleft syndrome","type":"exact"},{"name":"lip Pseudocleft-Hemangiomatous branchial cyst syndrome","type":"exact"}],"termid":"MONDO:0007235","xrefs":{"Monarch":{"xref_id":"0007235"}}}


id: PBO:0075877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST3 beta-galactoside alpha-2,3-sialyltransferase 4","termid":"PBO:0075877"}


id: GO:0008119
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + a thiopurine = S-adenosyl-L-homocysteine + a thiopurine S-methylether.","definition_xrefs":["EC:2.1.1.67"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-methyltransferase activity","termid":"GO:0008172"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"thiopurine S-methyltransferase activity","secondary_identifiers":["MetaCyc:THIOPURINE-S-METHYLTRANSFERASE-RXN","Reactome:R-HSA-9748979","Reactome:R-HSA-9748983","Reactome:R-HSA-158609","Reactome:R-HSA-5603379"],"synonyms":[{"name":"6-thiopurine transmethylase activity","type":"related"},{"name":"S-adenosyl-L-methionine:thiopurine S-methyltransferase activity","type":"related"},{"name":"TPMT","type":"related"},{"name":"mercaptopurine methyltransferase activity","type":"related"},{"name":"thiopurine methyltransferase activity","type":"related"}],"termid":"GO:0008119"}


id: PBO:0059319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L57 pseudogene 2","termid":"PBO:0059319"}


id: MONDO:0001599
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Mikulicz disease (obsolete MONDO:0001599)","termid":"MONDO:0001599","xrefs":{"Monarch":{"xref_id":"0001599"}}}


id: PBO:0113523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar alpha mannosidase; involved in free oligosaccharide (fOS) degradation; upregulated under glucose starvation; targeted to vacuole via CVT pathway and AP-3 pathway","termid":"PBO:0113523"}


id: MONDO:0001162
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A category of behaviors that can be loosely defined as the failure to resist an impulsive act or behavior that may be harmful to self or others.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"psychiatric disorder","termid":"MONDO:0002025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"impulse control disorder","secondary_identifiers":["ICD9:312.39","ICD9:312.30","NCIT:C34723","SCTID:66347000","DOID:10937","MEDGEN:5769","UMLS:C0021122"],"synonyms":[{"name":"ICD","type":"exact"},{"name":"impulse-control disorder","type":"exact"}],"termid":"MONDO:0001162","xrefs":{"Monarch":{"xref_id":"0001162"}}}


id: GO:2001269
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of cysteine-type endopeptidase activity involved in apoptotic signaling pathway.","definition_xrefs":["GOC:mtg_apoptosis"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway (obsolete GO:2001269)","synonyms":[{"name":"positive regulation of cysteine-type endopeptidase activity involved in apoptotic signalling pathway","type":"exact"},{"name":"positive regulation of initiator caspase activity","type":"narrow"}],"termid":"GO:2001269"}


id: MONDO:0006354
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hyperplasia that involves the parathyroid gland.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parathyroid gland disorder","termid":"MONDO:0001223"},{"relation_name":"is_a","term_name":"hyperplasia","termid":"MONDO:0005043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parathyroid hyperplasia","secondary_identifiers":["EFO:1000457","NCIT:C3989","HP:0008208","MEDGEN:75767","UMLS:C0271844","SCTID:9092004"],"synonyms":[{"name":"hyperplasia of parathyroid","type":"exact"},{"name":"hyperplasia of the parathyroid","type":"exact"},{"name":"parathyroid gland hyperplasia","type":"exact"},{"name":"parathyroid hyperplasia","type":"exact"},{"name":"parathyroid hyperplasia (disease)","type":"exact"}],"termid":"MONDO:0006354","xrefs":{"Monarch":{"xref_id":"0006354"}}}


id: PR:P15567
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ade6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P15567"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosylaminoimidazole carboxylase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1322.13","synonyms":[{"name":"AIR carboxylase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"AIRC (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ade6","type":"exact"}],"termid":"PR:P15567"}


id: PR:Q09725
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mis4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09725"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sister chromatid cohesion protein mis4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31A2.05c","synonyms":[{"name":"SCC2 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-mis4","type":"exact"}],"termid":"PR:Q09725"}


id: PBO:0002074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein involved in export of mRNAs (predicted)","termid":"PBO:0002074"}


id: _global:indirectly_positively_regulates
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"p indirectly positively regulates q iff p is indirectly causally upstream of q and p positively regulates q.","direct_ancestors":[{"relation_name":"is_a","term_name":"indirectly_regulates","termid":"_global:indirectly_regulates"},{"relation_name":"is_a","term_name":"positively_regulates","termid":"_global:positively_regulates"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"indirectly_positively_regulates","secondary_identifiers":["RO:0002407"],"termid":"_global:indirectly_positively_regulates"}


id: FYPO:0003489
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the regulation of the mitotic cell cycle in response to ionizing radiation is abnormal. Normally, cell cycle progression is slowed or arrested transiently following exposure to ionizing radiation. The most common abnormality is for the cell cycle to progress as in the absence of ionizing radiation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of mitotic cell cycle","termid":"FYPO:0000148"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"abnormal mitotic cell cycle regulation during cellular response to ionizing radiation","synonyms":[{"name":"abnormal cell cycle regulation during cellular response to ionizing radiation","type":"exact"},{"name":"abnormal cell cycle regulation during cellular response to ionizing radiation during mitotic cell cycle","type":"exact"},{"name":"abnormal mitotic cell cycle delay following ionizing radiation","type":"exact"},{"name":"abnormal mitotic cell cycle regulation during cellular response to IR","type":"exact"},{"name":"abnormal mitotic cell cycle regulation during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle regulation in response to ionizing radiation","type":"exact"}],"termid":"FYPO:0003489"}


id: PBO:0117404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar ATPase assembly factor VMA22","termid":"PBO:0117404"}


id: GO:0032542
data:
  {"annotated_genes":["SJAG_04125"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78563],"is_not":false,"summary":null,"term":"GO:0032542"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: peroxiredoxin-(S-hydroxy-S-oxocysteine) + ATP + 2 R-SH = peroxiredoxin-(S-hydroxycysteine) + ADP + phosphate + R-S-S-R.","definition_xrefs":["EC:1.8.98.2","PMID:16102934"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antioxidant activity","termid":"GO:0016209"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors","termid":"GO:0016667"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04125":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"sulfiredoxin activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:1.8.98.2-RXN","RHEA:17545","Reactome:R-HSA-9760094"],"synonyms":[{"name":"Srx1","type":"related"},{"name":"peroxiredoxin-(S-hydroxy-S-oxocysteine) reductase activity","type":"exact"},{"name":"peroxiredoxin-(S-hydroxy-S-oxocysteine):thiol oxidoreductase [ATP-hydrolysing; peroxiredoxin-(S-hydroxycysteine)-forming]","type":"related"},{"name":"sulphiredoxin activity","type":"exact"}],"termid":"GO:0032542","terms_by_termid":{"GO:0032542":null}}


id: GO:0097329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an antimetabolite stimulus. An antimetabolite is a substance which is structurally similar to a metabolite but which competes with it or replaces it, and so prevents or reduces its normal utilization.","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to antimetabolite","termid":"GO:0097329"}


id: PBO:0044992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diablo IAP-binding mitochondrial protein","termid":"PBO:0044992"}


id: GO:2000359
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of binding of sperm to the zona pellucida.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"binding of sperm to zona pellucida","termid":"GO:0007339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of binding of sperm to zona pellucida","synonyms":[{"name":"regulation of ZPG binding","type":"related"}],"termid":"GO:2000359"}


id: MONDO:0014626
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spinocerebellar ataxia type 41 is a rare autosomal dominant cerebellar ataxia type III disorder characterized by adult-onset progressive imbalance and loss of coordination associated with an ataxic gait. Mild atrophy of the cerebellar vermis has been reported on brain magnetic resonance imaging.","definition_xrefs":["Orphanet:458798"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia type III","termid":"MONDO:0019793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0005559","MONDO:0000426"],"is_obsolete":false,"name":"spinocerebellar ataxia type 41","secondary_identifiers":["OMIM:616410","MEDGEN:908281","UMLS:C4225158","DOID:0111744","GARD:17810"],"synonyms":[{"name":"SCA41","type":"exact"},{"name":"spinocerebellar ataxia 41","type":"related"},{"name":"spinocerebellar ataxia type 41","type":"exact"}],"termid":"MONDO:0014626","xrefs":{"Monarch":{"xref_id":"0014626"}}}


id: PBO:0044089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 45 member A9","termid":"PBO:0044089"}


id: GO:0045828
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving isoprenoid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of isoprenoid metabolic process","termid":"GO:0019747"},{"relation_name":"is_a","term_name":"positive regulation of lipid metabolic process","termid":"GO:0045834"},{"relation_name":"positively_regulates","term_name":"isoprenoid metabolic process","termid":"GO:0006720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"positive regulation of isoprenoid metabolic process","synonyms":[{"name":"activation of isoprenoid metabolic process","type":"narrow"},{"name":"positive regulation of isoprenoid metabolism","type":"exact"},{"name":"stimulation of isoprenoid metabolic process","type":"narrow"},{"name":"up regulation of isoprenoid metabolic process","type":"exact"},{"name":"up-regulation of isoprenoid metabolic process","type":"exact"},{"name":"upregulation of isoprenoid metabolic process","type":"exact"}],"termid":"GO:0045828"}


id: PBO:0052078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"katanin regulatory subunit B1 like 1 pseudogene 3","termid":"PBO:0052078"}


id: PBO:0076047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stathmin 1 pseudogene 2","termid":"PBO:0076047"}


id: GO:0005804
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete secretory vesicle membrane (obsolete GO:0005804)","synonyms":[{"name":"secretory vesicle membrane","type":"exact"}],"termid":"GO:0005804"}


id: PBO:0079537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-N-acetylglucosamine pyrophosphorylase 1","termid":"PBO:0079537"}


id: GO:2001211
data:
  {"annotated_genes":["SJAG_02380","SJAG_01187"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113227,117344],"is_not":false,"summary":null,"term":"GO:2001211"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of isopentenyl diphosphate biosynthetic process, mevalonate pathway.","definition_xrefs":["GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of amide metabolic process","termid":"GO:0034249"},{"relation_name":"is_a","term_name":"negative regulation of isoprenoid metabolic process","termid":"GO:0045827"},{"relation_name":"is_a","term_name":"negative regulation of nucleobase-containing compound metabolic process","termid":"GO:0045934"},{"relation_name":"is_a","term_name":"negative regulation of sulfur metabolic process","termid":"GO:0051175"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of phospholipid biosynthetic process","termid":"GO:0071072"},{"relation_name":"is_a","term_name":"regulation of isopentenyl diphosphate biosynthetic process, mevalonate pathway","termid":"GO:2001210"},{"relation_name":"negatively_regulates","term_name":"isopentenyl diphosphate biosynthetic process, mevalonate pathway","termid":"GO:0019287"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01187":null,"SJAG_02380":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0044281","GO:0055086","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of isopentenyl diphosphate biosynthetic process, mevalonate pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"negative regulation of Ac-MVA pathway","type":"exact"},{"name":"negative regulation of acetate-mevalonate pathway","type":"exact"},{"name":"negative regulation of isopentenyl diphosphate anabolism, mevalonate pathway","type":"exact"},{"name":"negative regulation of isopentenyl diphosphate formation, mevalonate pathway","type":"exact"},{"name":"negative regulation of isopentenyl diphosphate synthesis, mevalonate pathway","type":"exact"}],"termid":"GO:2001211","terms_by_termid":{"GO:2001211":null}}


id: MONDO:0005152
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition of diminution or cessation of secretion of one or more hormones from the anterior pituitary gland. This may result from surgical or radiation ablation, non-secretory pituitary neoplasms, metastatic tumors, infarction, pituitary apoplexy, infiltrative or granulomatous processes, and other conditions.","definition_xrefs":["NCIT:C62591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pituitary gland disorder","termid":"MONDO:0003381"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypopituitarism","secondary_identifiers":["MEDGEN:9386","MESH:D007018","EFO:0001380","NANDO:2100110","ICD10CM:E23.0","UMLS:C0020635","icd11.foundation:768216194","DOID:9406","NANDO:1200387","SCTID:74728003"],"synonyms":[{"name":"pituitary hormone deficiency","type":"exact"},{"name":"pituitary hypofunction","type":"related"},{"name":"pituitary insufficiency","type":"exact"}],"termid":"MONDO:0005152","xrefs":{"Monarch":{"xref_id":"0005152"}}}


id: MONDO:0024490
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"general tumor grading characteristic","termid":"MONDO:0024489"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor grade X, general grading system","synonyms":[{"name":"undetermined grade","type":"exact"}],"termid":"MONDO:0024490","xrefs":{"Monarch":{"xref_id":"0024490"}}}


id: GO:0102304
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate(3-) = 7-epi-sesquithujene + diphosphoric acid.","definition_xrefs":["EC:4.2.3.102","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"sesquithujene synthase activity","secondary_identifiers":["RHEA:31991","MetaCyc:RXN-12838"],"termid":"GO:0102304"}


id: PBO:0067762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 62","termid":"PBO:0067762"}


id: PATO:0001924
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's being positioned towards the middle of an organism.","definition_xrefs":["PATOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalised","termid":"PATO:0000628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mislocalised medially","termid":"PATO:0001924"}


id: GO:0019956
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a chemokine. Chemokines are a family of small chemotactic cytokines; their name is derived from their ability to induce directed chemotaxis in nearby responsive cells. All chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation. Some chemokines are considered pro-inflammatory and can be induced during an immune response to recruit cells of the immune system to a site of infection, while others are considered homeostatic and are involved in controlling the migration of cells during normal processes of tissue maintenance or development. Chemokines are found in all vertebrates, some viruses and some bacteria.","definition_xrefs":["Wikipedia:Chemokine","GOC:ai","GOC:rl","PMID:12183377","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine binding","termid":"GO:0019955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"chemokine binding","termid":"GO:0019956"}


id: PBO:0040923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basonuclin 1","termid":"PBO:0040923"}


id: GO:0044848
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A distinct period or stage in a biological process or cycle.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_process","termid":"GO:0008150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"biological phase","termid":"GO:0044848"}


id: PBO:0017631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatase activator Whi2","termid":"PBO:0017631"}


id: GO:0002765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately leading to inhibition of an immune response.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response-regulating signaling pathway","termid":"GO:0002764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"immune response-inhibiting signal transduction","termid":"GO:0002765"}


id: PBO:0110259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase II complex subunit Rpb2","termid":"PBO:0110259"}


id: GO:0008585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the female gonad over time, from its formation to the mature structure.","definition_xrefs":["GOC:tb","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gonad development","termid":"GO:0008406"},{"relation_name":"part_of","term_name":"development of primary female sexual characteristics","termid":"GO:0046545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"female gonad development","secondary_identifiers":["GO:0061039"],"synonyms":[{"name":"ovarian development","type":"related"},{"name":"ovary development","type":"related"}],"termid":"GO:0008585"}


id: GO:0052717
data:
  {"annotated_genes":["SJAG_04189"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75551],"is_not":false,"summary":null,"term":"GO:0052717"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: adenosine-34 + H2O = inosine-34 + NH3, in a tRNA-Ala molecule.","definition_xrefs":["RHEA:43168","PMID:17875641"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA-specific adenosine deaminase activity","termid":"GO:0008251"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04189":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"}],"interesting_parent_ids":["GO:0016787","GO:0140098","GO:0003824","GO:0003674","GO:0016810","GO:0140101"],"is_obsolete":false,"name":"tRNA-specific adenosine-34 deaminase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:3.5.4.33"],"synonyms":[{"name":"tRNA(Ala)-A34 deaminase activity","type":"exact"}],"termid":"GO:0052717","terms_by_termid":{"GO:0052717":null}}


id: PBO:0074358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structural maintenance of chromosomes 4 pseudogene 1","termid":"PBO:0074358"}


id: PBO:0061083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NK2 homeobox 2","termid":"PBO:0061083"}


id: PBO:0031013
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_nucleus","termid":"PBO:0031013"}


id: GO:0008106
data:
  {"annotated_genes":["SJAG_01543","SJAG_00242","SJAG_02010","SJAG_01869","SJAG_03821","SJAG_00038","SJAG_04660","SJAG_03958","SJAG_02963"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79257,94285,108372,108373],"is_not":false,"summary":null,"term":"GO:0008106"},{"annotations":[93632,76048],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004032"},{"annotations":[97569,103003],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032866"},{"annotations":[103004,97570],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032867"},{"annotations":[116257],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050236"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: an alcohol + NADP+ = an aldehyde or ketone + NADPH + H+.","definition_xrefs":["EC:1.1.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol dehydrogenase [NAD(P)+] activity","termid":"GO:0018455"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00038":null,"SJAG_00242":null,"SJAG_01543":null,"SJAG_01869":null,"SJAG_02010":null,"SJAG_02963":null,"SJAG_03821":null,"SJAG_03958":null,"SJAG_04660":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"alcohol dehydrogenase (NADP+) activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"NADP-aldehyde reductase activity","type":"exact"},{"name":"alcohol:NADP dehydrogenase activity","type":"exact"},{"name":"aldehyde reductase (NADPH) activity","type":"exact"}],"termid":"GO:0008106","terms_by_termid":{"GO:0004032":null,"GO:0008106":null,"GO:0032866":null,"GO:0032867":null,"GO:0050236":null}}


id: PBO:0047296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acyl-CoA reductase 2 pseudogene 3","termid":"PBO:0047296"}


id: MONDO:0024469
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, intermediate, or malignant cartilaginous matrix-producing neoplasm. Representative examples include osteochondroma, chondroblastoma, and chondrosarcoma.","definition_xrefs":["NCIT:C4755"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal cell neoplasm","termid":"MONDO:0002616"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondrogenic neoplasm","secondary_identifiers":["MEDGEN:96904","UMLS:C0476147"],"synonyms":[{"name":"cartilaginous neoplasm","type":"exact"},{"name":"cartilaginous tumor","type":"exact"},{"name":"cartilaginous tumour","type":"exact"},{"name":"chondrogenic neoplasm","type":"exact"},{"name":"chondrogenic tumor","type":"exact"},{"name":"chondrogenic tumour","type":"exact"},{"name":"chondromatous neoplasm","type":"exact"},{"name":"chondromatous tumor","type":"exact"},{"name":"chondromatous tumour","type":"exact"},{"name":"neoplasm of cartilage","type":"exact"},{"name":"neoplasm of the cartilage","type":"exact"},{"name":"tumor of cartilage","type":"exact"},{"name":"tumor of the cartilage","type":"exact"},{"name":"tumour of cartilage","type":"exact"},{"name":"tumour of the cartilage","type":"exact"}],"termid":"MONDO:0024469","xrefs":{"Monarch":{"xref_id":"0024469"}}}


id: FYPO:0007135
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the number of apurinic and ayprimidinic (collectively, AP) sites detected in DNA is greater than normal. An AP is a deoxyribose sugar with a missing base, and is formed by the enzymatic removal of a damaged base.","definition_xrefs":["PomBase:mah","PMID:12810074"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985"],"is_obsolete":false,"name":"increased level of AP sites in DNA","synonyms":[{"name":"increased level of DNA AP sites","type":"exact"},{"name":"increased level of DNA apurinic/apyrimidinic sites","type":"exact"},{"name":"increased level of apurinic/apyrimidinic sites in DNA","type":"exact"}],"termid":"FYPO:0007135"}


id: PBO:0042728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein F","termid":"PBO:0042728"}


id: GO:0002183
data:
  {"annotated_genes":["SJAG_02471","SJAG_04900","SJAG_02390","SJAG_02592","SJAG_00169","SJAG_04744","SJAG_03869","SJAG_03147","SJAG_02164","SJAG_00662","SJAG_00912","SJAG_03732","SJAG_03678","SJAG_03472","SJAG_00466","SJAG_03534","SJAG_02628","SJAG_01659","SJAG_03629","SJAG_02061","SJAG_01576","SJAG_04772","SJAG_04383","SJAG_05003","SJAG_02263","SJAG_01117","SJAG_00507","SJAG_02307","SJAG_02638","SJAG_01954","SJAG_00786","SJAG_01942","SJAG_02376","SJAG_03223","SJAG_00690","SJAG_02072","SJAG_03433","SJAG_04873","SJAG_03996","SJAG_03788","SJAG_04981","SJAG_03658","SJAG_02995","SJAG_04891","SJAG_01487","SJAG_02026","SJAG_01643","SJAG_04093"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75658,78933,89331,91718,92174,98477,99040,100191,102326,105037,105216,105350,106586,107440,108852,109145,112464,115834,120392],"is_not":false,"summary":null,"term":"GO:0002183"},{"annotations":[64701,60316,63226,64939,70260,60160,71313,73757,98667,59471,100746,76905],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0001732"},{"annotations":[73132,79757,97903,75201,80197,119929],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0001731"},{"annotations":[114010,93122],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1904689"},{"annotations":[101149,111520,117480,71679,96179,76982],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1990625"},{"annotations":[105151,105783,97042],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1990611"},{"annotations":[76906,75202],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002188"}]},"cv_name":"biological_process","definition":"The process preceding formation of the peptide bond between the first two amino acids of a protein in the cytoplasm. This includes the formation of a complex of the ribosome, mRNA or circRNA, and an initiation complex that contains the first aminoacyl-tRNA.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translational initiation","termid":"GO:0006413"},{"relation_name":"part_of","term_name":"cytoplasmic translation","termid":"GO:0002181"}],"gene_count":48,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00466":null,"SJAG_00507":null,"SJAG_00662":null,"SJAG_00690":null,"SJAG_00786":null,"SJAG_00912":null,"SJAG_01117":null,"SJAG_01487":null,"SJAG_01576":null,"SJAG_01643":null,"SJAG_01659":null,"SJAG_01942":null,"SJAG_01954":null,"SJAG_02026":null,"SJAG_02061":null,"SJAG_02072":null,"SJAG_02164":null,"SJAG_02263":null,"SJAG_02307":null,"SJAG_02376":null,"SJAG_02390":null,"SJAG_02471":null,"SJAG_02592":null,"SJAG_02628":null,"SJAG_02638":null,"SJAG_02995":null,"SJAG_03147":null,"SJAG_03223":null,"SJAG_03433":null,"SJAG_03472":null,"SJAG_03534":null,"SJAG_03629":null,"SJAG_03658":null,"SJAG_03678":null,"SJAG_03732":null,"SJAG_03788":null,"SJAG_03869":null,"SJAG_03996":null,"SJAG_04093":null,"SJAG_04383":null,"SJAG_04744":null,"SJAG_04772":null,"SJAG_04873":null,"SJAG_04891":null,"SJAG_04900":null,"SJAG_04981":null,"SJAG_05003":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0002181"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0002181","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"cytoplasmic translational initiation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0002183","terms_by_termid":{"GO:0001731":null,"GO:0001732":null,"GO:0002183":null,"GO:0002188":null,"GO:1904689":null,"GO:1990611":null,"GO:1990625":null}}


id: GO:0014053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of gamma-aminobutyric acid.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gamma-aminobutyric acid secretion","termid":"GO:0014052"},{"relation_name":"is_a","term_name":"negative regulation of organic acid transport","termid":"GO:0032891"},{"relation_name":"is_a","term_name":"negative regulation of secretion","termid":"GO:0051048"},{"relation_name":"is_a","term_name":"negative regulation of amino acid transport","termid":"GO:0051956"},{"relation_name":"negatively_regulates","term_name":"gamma-aminobutyric acid secretion","termid":"GO:0014051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of gamma-aminobutyric acid secretion","synonyms":[{"name":"down regulation of gamma-aminobutyric acid secretion","type":"exact"},{"name":"down-regulation of gamma-aminobutyric acid secretion","type":"exact"},{"name":"downregulation of gamma-aminobutyric acid secretion","type":"exact"},{"name":"inhibition of gamma-aminobutyric acid secretion","type":"narrow"},{"name":"negative regulation of GABA secretion","type":"exact"}],"termid":"GO:0014053"}


id: PBO:0001848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase with bromodomain protein (predicted)","termid":"PBO:0001848"}


id: PBO:0034044
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_muscle_antagonist","termid":"PBO:0034044"}


id: PBO:0013087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Prp43","termid":"PBO:0013087"}


id: PR:O14322
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug100 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14322"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 100 protein, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16E9.07","synonyms":[{"name":"Spom972h-mug100","type":"exact"}],"termid":"PR:O14322"}


id: PBO:0065288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich transmembrane protein 3","termid":"PBO:0065288"}


id: FYPO:0002116
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a specified transmembrane transporter activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"},{"relation_name":"is_a","term_name":"abnormal transport","termid":"FYPO:0001720"},{"relation_name":"is_a","term_name":"transmembrane transporter activity phenotype","termid":"FYPO:0002114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002114"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002114","FYPO:0000707","FYPO:0005447","FYPO:0000138","FYPO:0000652","FYPO:0000002"],"is_obsolete":false,"name":"abnormal transmembrane transporter activity","termid":"FYPO:0002116"}


id: PBO:0084491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific protein; involved in normal synaptonemal complex formation and pairing between homologous chromosomes during meiosis; relocalizes from mitochondrion to cytoplasm upon DNA replication stress","termid":"PBO:0084491"}


id: GO:0008016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of heart contraction. Heart contraction is the process in which the heart decreases in volume in a characteristic way to propel blood through the body.","definition_xrefs":["GOC:dph","GOC:go_curators","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of blood circulation","termid":"GO:1903522"},{"relation_name":"regulates","term_name":"heart contraction","termid":"GO:0060047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of heart contraction","synonyms":[{"name":"regulation of cardiac contraction","type":"exact"}],"termid":"GO:0008016"}


id: PBO:0051202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 4-30-1","termid":"PBO:0051202"}


id: SO:0000027
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","direct_ancestors":[{"relation_name":"is_a","term_name":"RNA_junction_loop","termid":"SO:0000026"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA_hook_turn","synonyms":[{"name":"RNA hook turn","type":"exact"},{"name":"hook turn","type":"related"},{"name":"hook-turn motif","type":"exact"}],"termid":"SO:0000027"}


id: GO:1905468
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of clathrin-coated pit assembly.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:bf","GOC:PARL"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of clathrin-coated pit assembly (obsolete GO:1905468)","synonyms":[{"name":"regulation of clathrin-coated pit formation","type":"exact"},{"name":"regulation of coated pit assembly","type":"exact"},{"name":"regulation of coated pit formation","type":"exact"}],"termid":"GO:1905468"}


id: PBO:0031069
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_small_spore","termid":"PBO:0031069"}


id: PBO:0006679
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Defective in SREBP Cleavage","termid":"PBO:0006679"}


id: MONDO:0010268
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked lissencephaly with abnormal genitalia (XLAG) is a severe neurological disorder that only manifests in genotypic males and includes lissencephaly with posterior-to-anterior gradient and only moderate increase in thickness of the cortex, absent corpus callosum, neonatal-onset severe epilepsy, hypothalamic dysfunction including defective temperature regulation, and ambiguous genitalia with micropenis and cryptorchidism. XLAG differs considerably from classical lissencephaly, as the resulting cortical thickness is only 6-7 mm in XLAG, rather than 15-20 mm seen in classical lissencephaly due to mutations of the PAFAH1B1 or DCX genes. In 2002, mutations in the X-linked aristaless-related homeobox gene (ARX ; Xp21.3) were identified in individuals with XLAG and in some of their female relatives. Mouse Arx and human ARX are highly expressed in both dorsal and ventral telencephalon, including the neocortical ventricular zone and germinal zone of the ganglionic eminence, with less intense signals in the subventricular zone, cortical plate, hippocampus, basal ganglia and ventral thalamus. Arx-deficient mice showed deficient tangential migration and abnormal differentiation of GABAergic interneurons in the ganglionic eminence and neocortex, as well as abnormal testicular differentiation. These characteristics include some of the clinical features of XLAG in humans. The ARX mutations in XLAG patients were predominantly premature termination mutations (large deletions, frameshift, nonsense mutations, splice site mutations) while the missense mutations were less common and located essentially in the homeobox domain. Patients carrying nonconservative missense mutations within the homeobox, showed less severe XLAG, while conservative substitution in the homeodomain caused Proud syndrome (ACC with abnormal genitalia). A non conservative missense mutation near the C-terminal aristaless domain caused unusually severe XLAG with microcephaly and mild cerebellar hypoplasia. The ARX mutations are also associated with a spectrum of milder phenotypes, without macroscopic malformations of the brain, such as X-linked infantile spasms, a syndrome featuring mental retardation associated with distal dystonic movements (Partington syndrome), autistic features and nonsyndromicintellectual deficit.","direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked disease","termid":"MONDO:0000425"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"lissencephaly spectrum disorders","termid":"MONDO:0018838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"X-linked lissencephaly with abnormal genitalia","secondary_identifiers":["SCTID:717632002","MESH:C564563","OMIM:300215","UMLS:C1846171","DOID:0112238","Orphanet:452","GARD:12491","MEDGEN:375832"],"synonyms":[{"name":"LISX2","type":"related"},{"name":"X-linked lissencephaly - agenesis of the corpus callosum - genital anomalies","type":"related"},{"name":"X-linked lissencephaly with abnormal genitalia","type":"exact"},{"name":"X-linked lissencephaly with ambiguous genitalia","type":"exact"},{"name":"X-linked lissencephaly-agenesis of the corpus callosum-genital anomalies syndrome","type":"exact"},{"name":"X-linked lissencephaly-corpus callosum agenesis-genital anomalies syndrome","type":"exact"},{"name":"XLAG (X-linked lissencephaly with abnormal genitalia) syndrome","type":"exact"},{"name":"XLAG syndrome","type":"related"},{"name":"Xlisg","type":"related"},{"name":"hydranencephaly and abnormal genitalia","type":"related"},{"name":"hydranencephaly with abnormal genitalia","type":"related"},{"name":"lissencephaly, X-linked 2","type":"related"},{"name":"lissencephaly, X-linked, 2","type":"related"},{"name":"lissencephaly, X-linked, type 2","type":"exact"},{"name":"lissencephaly, X-linked, with ambiguous genitalia","type":"related"}],"termid":"MONDO:0010268","xrefs":{"Monarch":{"xref_id":"0010268"}}}


id: PATO:0001050
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001050 relative susceptibility (obsolete PATO:0001050)","termid":"PATO:0001050"}


id: GO:0004475
data:
  {"annotated_genes":["SJAG_00890","SJAG_03188"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77166,104912],"is_not":false,"summary":null,"term":"GO:0004475"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-mannose 1-phosphate + GTP = diphosphate + GDP-alpha-D-mannose.","definition_xrefs":["RHEA:15229"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanylyltransferase activity","termid":"GO:0070568"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00890":null,"SJAG_03188":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016779","GO:0016740"],"is_obsolete":false,"name":"mannose-1-phosphate guanylyltransferase (GTP) activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:2.7.7.13-RXN","Reactome:R-HSA-446221","EC:2.7.7.13","KEGG_REACTION:R00885"],"synonyms":[{"name":"GDP-mannose pyrophosphorylase activity","type":"related"},{"name":"GTP-mannose-1-phosphate guanylyltransferase activity","type":"related"},{"name":"GTP:alpha-D-mannose-1-phosphate guanylyltransferase activity","type":"related"},{"name":"GTP:mannose-1-phosphate guanylyltransferase activity","type":"exact"},{"name":"PIM-GMP (phosphomannose isomerase-guanosine 5'-diphospho-D-mannose pyrophosphorylase)","type":"related"},{"name":"guanosine 5'-diphospho-D-mannose pyrophosphorylase activity","type":"related"},{"name":"guanosine diphosphomannose pyrophosphorylase activity","type":"related"},{"name":"guanosine triphosphate-mannose 1-phosphate guanylyltransferase activity","type":"related"},{"name":"mannose 1-phosphate guanylyltransferase (guanosine triphosphate)","type":"related"},{"name":"mannose-1-phosphate guanylyltransferase activity","type":"broad"}],"termid":"GO:0004475","terms_by_termid":{"GO:0004475":null}}


id: MONDO:0005262
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital or acquired cyst that is present in the central nervous system.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central nervous system cyst","secondary_identifiers":["MEDGEN:138106","MESH:D020863","NCIT:C4657","SCTID:277333006","HP:0030724","UMLS:C0349606","EFO:0003760"],"synonyms":[{"name":"CNS cyst","type":"exact"},{"name":"Rathke cleft cysts","type":"related"},{"name":"Rathke's cleft cysts","type":"related"},{"name":"Rathkes cleft cysts","type":"related"},{"name":"central nervous system cyst","type":"exact"},{"name":"central nervous system cyst (disease)","type":"exact"},{"name":"cleft cysts, Rathke's","type":"related"},{"name":"cyst of CNS","type":"exact"},{"name":"cyst of Central nervous system","type":"exact"},{"name":"cyst of the CNS","type":"exact"},{"name":"cyst of the Central nervous system","type":"exact"},{"name":"cyst, suprasellar","type":"related"},{"name":"cysts, Rathke cleft","type":"related"},{"name":"cysts, central nervous system","type":"related"},{"name":"cysts, suprasellar","type":"related"},{"name":"suprasellar cyst","type":"related"},{"name":"suprasellar cysts","type":"related"}],"termid":"MONDO:0005262","xrefs":{"Monarch":{"xref_id":"0005262"}}}


id: PBO:0116412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific DUF999 family protein 7","termid":"PBO:0116412"}


id: GO:0043503
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which the skeletal muscle fibers change their phenotypic profiles in response to altered functional demands and a variety of signals. Muscle fibers are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast.","definition_xrefs":["PMID:11181628","GOC:mtg_muscle","PMID:11449884","PMID:12605307"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to stimulus","termid":"GO:0051716"},{"relation_name":"part_of","term_name":"skeletal muscle adaptation","termid":"GO:0043501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal muscle fiber adaptation","synonyms":[{"name":"skeletal muscle fiber plasticity","type":"related"},{"name":"skeletal muscle fibre plasticity","type":"exact"},{"name":"skeletal myofiber plasticity","type":"exact"},{"name":"skeletal myofibre plasticity","type":"exact"}],"termid":"GO:0043503"}


id: RO:0002641
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of intracellular endoparasite of","direct_ancestors":[{"relation_name":"is_a","term_name":"has_endoparasite","termid":"RO:0002635"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_intracellular_endoparasite","termid":"RO:0002641"}


id: PBO:0028404
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ubiquinone_binding","termid":"PBO:0028404"}


id: MONDO:0016284
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Primitive neuroectodermal tumor of the cervix uteri is a rare cancer of cervix uteri derived from neural crest cells, histologically composed of small, round neoplatic cells with variable degree of neural, glial and ependymal differentiation. Macroscopically, the tumor is often a large, soft, poorly circumscribed mass with infiltrative borders and necrotic areas. It presents with dysfunctional vaginal bleeding or discharge, lower abdominal pain and uterine enlargement.","definition_xrefs":["Orphanet:213812"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sarcoma of cervix uteri","termid":"MONDO:0016280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"primitive neuroectodermal tumor of the cervix uteri","secondary_identifiers":["ICD10CM:C53.0","GARD:20496","MEDGEN:1636418","UMLS:C4707725"],"synonyms":[{"name":"cervical malignant peripheral neuroectodermal tumor","type":"exact"},{"name":"cervical malignant peripheral neuroectodermal tumour","type":"exact"},{"name":"cervical peripheral neuroectodermal cancer","type":"exact"},{"name":"malignant peripheral neuroectodermal tumor of the cervix uteri","type":"exact"},{"name":"malignant peripheral neuroectodermal tumour of the cervix uteri","type":"exact"},{"name":"peripheral neuroectodermal cancer of cervix uteri","type":"exact"}],"termid":"MONDO:0016284","xrefs":{"Monarch":{"xref_id":"0016284"}}}


id: PBO:0040914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMS1 pseudogene 18","termid":"PBO:0040914"}


id: PBO:0085297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pheromone-regulated protein; predicted to have one transmembrane segment; promoter contains Gcn4p binding elements; in W303 strain one continuous open reading frame comprising of YDL037C, the intergenic region and YDL039C encodes the IMI1","termid":"PBO:0085297"}


id: MONDO:0004865
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A acute transudative otitis media involving thick, viscid and mucuslike fluid effusion due to which the drum appears blue in color.","definition_xrefs":["DOID:9736"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute transudative otitis media","termid":"MONDO:0002738"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"blue drum syndrome","secondary_identifiers":["SCTID:52353000","MEDGEN:583099","UMLS:C0395863","ICD9:381.02"],"synonyms":[{"name":"acute mucoid otitis media","type":"exact"},{"name":"acute non-suppurative otitis media - mucoid","type":"related"},{"name":"blue drum syndrome","type":"exact"}],"termid":"MONDO:0004865","xrefs":{"Monarch":{"xref_id":"0004865"}}}


id: MONDO:0001235
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the vermiform appendix","direct_ancestors":[{"relation_name":"is_a","term_name":"appendiceal neoplasm","termid":"MONDO:0001236"},{"relation_name":"is_a","term_name":"cecum cancer","termid":"MONDO:0002033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"appendix cancer","secondary_identifiers":["ICD10CM:C18.1","SCTID:363411007","MEDGEN:141676","DOID:11239","NCIT:C9333","UMLS:C0496779","ICD9:153.5"],"synonyms":[{"name":"cancer of the appendix","type":"exact"},{"name":"cancer of vermiform appendix","type":"exact"},{"name":"malignant appendix neoplasm","type":"exact"},{"name":"malignant appendix tumor","type":"exact"},{"name":"malignant appendix tumour","type":"exact"},{"name":"malignant neoplasm of appendix","type":"exact"},{"name":"malignant neoplasm of appendix vermiformis","type":"exact"},{"name":"malignant neoplasm of the appendix","type":"exact"},{"name":"malignant neoplasm of vermiform appendix","type":"exact"},{"name":"malignant tumor of appendix","type":"exact"},{"name":"malignant tumor of the appendix","type":"exact"},{"name":"malignant tumour of appendix","type":"exact"},{"name":"malignant tumour of the appendix","type":"exact"},{"name":"malignant vermiform appendix neoplasm","type":"exact"},{"name":"vermiform appendix cancer","type":"exact"}],"termid":"MONDO:0001235","xrefs":{"Monarch":{"xref_id":"0001235"}}}


id: GO:0031427
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a methotrexate stimulus. Methotrexate is 4-amino-10-methylformic acid, a folic acid analogue that is a potent competitive inhibitor of dihydrofolate reductase.","definition_xrefs":["GOC:ef","GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to methotrexate","termid":"GO:0031427"}


id: PBO:0003978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"imidazoleglycerol-phosphate dehydratase His5","termid":"PBO:0003978"}


id: PR:Q9UTS5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- zas1 gene.","definition_xrefs":["UniProtKB:Q9UTS5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein zas1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1198.04c","synonyms":[{"name":"Spom972h-zas1","type":"exact"}],"termid":"PR:Q9UTS5"}


id: FYPO:0007189
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to sampangine. Cells stop growing (and may die) at a concentration of sampangine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0001985","FYPO:0000139","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to sampangine","synonyms":[{"name":"hypersensitive to sampangine","type":"exact"},{"name":"sensitive to sampangine during mitotic cell cycle","type":"related"},{"name":"sensitive to sampangine during vegetative growth","type":"exact"}],"termid":"FYPO:0007189"}


id: GO:0018949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving m-xylene, (1,3-dimethylbenzene) a colorless, liquid aromatic hydrocarbon.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylene metabolic process","termid":"GO:0018948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"m-xylene metabolic process","secondary_identifiers":["UM-BBD_pathwayID:mxy"],"synonyms":[{"name":"m-xylene metabolism","type":"exact"},{"name":"meta-xylene metabolic process","type":"exact"},{"name":"meta-xylene metabolism","type":"exact"}],"termid":"GO:0018949"}


id: MONDO:0001868
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An angle-closure glaucoma characterized by closure of the anterior chamber angle by an intrinsic defect such that aqueous outflow is blocked and the intraocular pressure becomes inappropriately elevated leading to optic nerve damage and visual field loss. Primary angle-closure glaucoma has symptom progressive peripheral vision loss, decreased vision, and pain, redness, and headache in acute cases. Primary angle closure glaucoma can be caused by anatomically narrow angle, defects in the trabecular meshwork, and iris abnormalities. Primary angle-closure glaucoma has a strong genetic component.","definition_xrefs":["DOID:1405"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angle-closure glaucoma","termid":"MONDO:0001744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"primary angle-closure glaucoma","secondary_identifiers":["ICD9:365.2","NCIT:C34640","ICD10CM:H40.2","MEDGEN:42225","EFO:1001506","ICD9:365.20","SCTID:392288006","UMLS:C0017606"],"synonyms":[{"name":"primary angle closure glaucoma","type":"exact"}],"termid":"MONDO:0001868","xrefs":{"Monarch":{"xref_id":"0001868"}}}


id: PBO:0003673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Nsa1 (predicted)","termid":"PBO:0003673"}


id: GO:0140027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of the contractile vacuole to a specific location.","definition_xrefs":["PMID:19687255"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle localization","termid":"GO:0051648"},{"relation_name":"is_a","term_name":"vacuolar localization","termid":"GO:1990849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"contractile vacuole localization","synonyms":[{"name":"establishment of contractile vacuole localization","type":"narrow"}],"termid":"GO:0140027"}


id: GO:0009866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by ethylene (ethene) involved in induced systemic resistance.","definition_xrefs":["GOC:jy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"activation of innate immune response","termid":"GO:0002218"},{"relation_name":"is_a","term_name":"immune effector process","termid":"GO:0002252"},{"relation_name":"is_a","term_name":"ethylene-activated signaling pathway","termid":"GO:0009873"},{"relation_name":"part_of","term_name":"induced systemic resistance","termid":"GO:0009682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"induced systemic resistance, ethylene mediated signaling pathway","synonyms":[{"name":"ethene mediated signaling pathway (induced systemic resistance)","type":"exact"},{"name":"ethylene mediated signaling pathway (induced systemic resistance)","type":"exact"},{"name":"induced systemic resistance, ethene mediated signaling pathway","type":"exact"},{"name":"induced systemic resistance, ethene mediated signalling pathway","type":"exact"},{"name":"induced systemic resistance, ethylene mediated signalling pathway","type":"exact"}],"termid":"GO:0009866"}


id: MONDO:1040035
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinopathy caused by variants in the LRIT3 gene.","definition_xrefs":["PMID:23246293","PMID:31189098"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"LRIT3-related retinopathy","synonyms":[{"name":"LRIT3-related retinopathy","type":"exact"}],"termid":"MONDO:1040035","xrefs":{"Monarch":{"xref_id":"1040035"}}}


id: FYPO:0007251
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of lipid binding by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal lipid binding","termid":"FYPO:0007250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"decreased lipid binding","synonyms":[{"name":"reduced lipid binding","type":"exact"}],"termid":"FYPO:0007251"}


id: PATO:0002283
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A mobility which is relative low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"mobile","termid":"PATO:0000299"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased mobility","termid":"PATO:0002283"}


id: MOD:01068
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a hydrogen atom of an L-tryptophan residue with a halogen atom.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"halogen containing residue","termid":"MOD:00694"},{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"halogenated tryptophan","synonyms":[{"name":"HalTrp","type":"exact"}],"termid":"MOD:01068"}


id: MONDO:0020564
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete well-differentiated liposarcoma (obsolete MONDO:0020564)","termid":"MONDO:0020564","xrefs":{"Monarch":{"xref_id":"0020564"}}}


id: GO:0021548
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the pons over time, from its formation to the mature structure. The pons lies above the medulla and next to the cerebellum. The pons conveys information about movement from the cerebral hemisphere to the cerebellum.","definition_xrefs":["GOC:cls","GOC:dph","GOC:jid","GOC:dgh","ISBN:0838580343","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"metencephalon development","termid":"GO:0022037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pons development","termid":"GO:0021548"}


id: GO:0050896
data:
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id: GO:0000809
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id: PBO:0053635
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id: GO:0015310
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id: PBO:0027645
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id: PBO:0085359
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id: MONDO:1012802
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id: MONDO:1012767
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id: PBO:0005120
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id: PBO:0051483
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id: GO:0019475
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id: GO:0046786
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id: GO:0001195
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id: GO:0160001
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id: GO:0000026
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id: GO:0034492
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id: GO:0009074
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id: PBO:0080282
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id: MONDO:0008258
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet signal processing defect","secondary_identifiers":["MEDGEN:357448","MESH:C566796","OMIM:173590","UMLS:C1868199"],"synonyms":[{"name":"platelet signal processing defect","type":"exact"}],"termid":"MONDO:0008258","xrefs":{"Monarch":{"xref_id":"0008258"}}}


id: FYPO:0007890
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the kinetochore of a chromosome is normal during mitotic spindle assembly checkpoint signaling.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to kinetochore during vegetative growth","termid":"FYPO:0002901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to kinetochore during mitotic spindle assembly checkpoint signaling","termid":"FYPO:0007890"}


id: PBO:0030798
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_cortical_microtubule_cytoskeleton_during_vegetative_growth","termid":"PBO:0030798"}


id: GO:0098838
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a folic acid, or one of its derivatives (dihydrofolate, tetrahydrofolate, methylene-tetrahydrofolate or methyl-tetrahydrofolate) is transported across a membrane.","definition_xrefs":["PMID:24745983"],"direct_ancestors":[{"relation_name":"is_a","term_name":"folic acid transport","termid":"GO:0015884"},{"relation_name":"is_a","term_name":"vitamin transmembrane transport","termid":"GO:0035461"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"folate transmembrane transport","synonyms":[{"name":"folic acid transmembrane transport","type":"related"},{"name":"reduced folate transmembrane transport","type":"narrow"}],"termid":"GO:0098838"}


id: CHEBI:27365
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc ion","termid":"CHEBI:27365"}


id: GO:0016049
data:
  {"annotated_genes":["SJAG_04322","SJAG_02723","SJAG_03581","SJAG_02838","SJAG_03602","SJAG_02169","SJAG_04724","SJAG_02392","SJAG_01456","SJAG_03705","SJAG_03486","SJAG_00216","SJAG_04509","SJAG_01017","SJAG_00244","SJAG_00514"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97663,96392,91681],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0051519"},{"annotations":[95830,89705],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042815"},{"annotations":[108688,101558,119766,105308,112612,118342,89869],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0051523"},{"annotations":[92538],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0051517"},{"annotations":[108488],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0030307"},{"annotations":[116910],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0051516"},{"annotations":[100246],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0061387"}]},"cv_name":"biological_process","definition":"The process in which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"},{"relation_name":"is_a","term_name":"growth","termid":"GO:0040007"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00216":null,"SJAG_00244":null,"SJAG_00514":null,"SJAG_01017":null,"SJAG_01456":null,"SJAG_02169":null,"SJAG_02392":null,"SJAG_02723":null,"SJAG_02838":null,"SJAG_03486":null,"SJAG_03581":null,"SJAG_03602":null,"SJAG_03705":null,"SJAG_04322":null,"SJAG_04509":null,"SJAG_04724":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell growth","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0048591"],"synonyms":[{"name":"cell expansion","type":"related"},{"name":"cellular growth","type":"exact"},{"name":"growth of cell","type":"exact"},{"name":"metabolic process resulting in cell growth","type":"related"},{"name":"metabolism resulting in cell growth","type":"related"},{"name":"non-developmental cell growth","type":"related"},{"name":"non-developmental growth of a unicellular organism","type":"related"}],"termid":"GO:0016049","terms_by_termid":{"GO:0030307":null,"GO:0042815":null,"GO:0051516":null,"GO:0051517":null,"GO:0051519":null,"GO:0051523":null,"GO:0061387":null}}


id: PBO:0047957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(20)(p12.2)","termid":"PBO:0047957"}


id: MONDO:0021004
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease characterized by the presence of brachydactyly, including syndromic and non-syndromic forms.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly","secondary_identifiers":["icd11.foundation:598200019","MEDGEN:67454","HP:0001156","SCTID:43476002","DOID:0050581","MESH:D059327","UMLS:C0221357"],"synonyms":[{"name":"brachydactyly","type":"exact"},{"name":"brachydactyly (disease)","type":"exact"}],"termid":"MONDO:0021004","xrefs":{"Monarch":{"xref_id":"0021004"}}}


id: PATO:0000545
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000545 relative photosensitivity value (obsolete PATO:0000545)","termid":"PATO:0000545"}


id: PBO:0028985
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_alpha,alpha-trehalase_activity_increase_during_cellular_response_to_heat_stress","termid":"PBO:0028985"}


id: PBO:0075765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/arginine repetitive matrix 4","termid":"PBO:0075765"}


id: PBO:0084477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mating pheromone alpha-factor, made by alpha cells; interacts with mating type a cells to induce cell cycle arrest and other responses leading to mating; also encoded by MF(ALPHA)2, although MF(ALPHA)1 produces most alpha-factor; binds copper(II) ions","termid":"PBO:0084477"}


id: FYPO:0003409
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the formation of chromatin containing the histone H3 variant CenH3 (also called CENP-A; Cnp1 in S. pombe) is abnormal. CENP-A-containing nucleosomes are normally assembled into chromatin at the centromeres, encompassing the central core and centromeric inner repeat regions.","definition_xrefs":["PomBase:vw","PomBase:mah","PMID:24710126","GO:0034080"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-containing complex assembly","termid":"FYPO:0000447"},{"relation_name":"is_a","term_name":"abnormal CENP-A containing chromatin organization","termid":"FYPO:0004308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000641","FYPO:0001985"],"is_obsolete":false,"name":"abnormal CENP-A containing chromatin assembly","synonyms":[{"name":"abnormal CENP-A containing nucleosome assembly","type":"related"},{"name":"abnormal CENP-A containing nucleosome assembly at centromere","type":"exact"},{"name":"abnormal CENP-A containing nucleosome assembly during mitotic cell cycle","type":"related"},{"name":"abnormal CENP-A containing nucleosome assembly during vegetative growth","type":"exact"},{"name":"abnormal CENP-A deposition","type":"related"},{"name":"abnormal CENP-A loading","type":"related"},{"name":"abnormal CenH3-containing nucleosome assembly","type":"related"},{"name":"abnormal DNA replication-independent nucleosome assembly at centromere","type":"exact"},{"name":"abnormal centromere-specific histone exchange","type":"exact"},{"name":"abnormal centromere-specific nucleosome assembly","type":"exact"},{"name":"abnormal centromeric DNA replication-independent nucleosome assembly","type":"exact"}],"termid":"FYPO:0003409"}


id: GO:0050812
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of acyl-CoA.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of fatty acid metabolic process","termid":"GO:0019217"},{"relation_name":"is_a","term_name":"regulation of nucleobase-containing compound metabolic process","termid":"GO:0019219"},{"relation_name":"is_a","term_name":"regulation of phosphate metabolic process","termid":"GO:0019220"},{"relation_name":"is_a","term_name":"regulation of amide metabolic process","termid":"GO:0034248"},{"relation_name":"is_a","term_name":"regulation of sulfur metabolic process","termid":"GO:0042762"},{"relation_name":"regulates","term_name":"acyl-CoA biosynthetic process","termid":"GO:0071616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006790","GO:0006629","GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"regulation of acyl-CoA biosynthetic process","synonyms":[{"name":"regulation of acyl-CoA anabolism","type":"exact"},{"name":"regulation of acyl-CoA biosynthesis","type":"exact"},{"name":"regulation of acyl-CoA formation","type":"exact"},{"name":"regulation of acyl-CoA synthesis","type":"exact"}],"termid":"GO:0050812"}


id: GO:0034176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of toll-like receptor 12 signaling pathway.","definition_xrefs":["PMID:17328678","PMID:16551253","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of toll-like receptor 12 signaling pathway","termid":"GO:0034175"},{"relation_name":"is_a","term_name":"negative regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039532"},{"relation_name":"negatively_regulates","term_name":"toll-like receptor 12 signaling pathway","termid":"GO:0034174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of toll-like receptor 12 signaling pathway","synonyms":[{"name":"negative regulation of TLR12 signaling pathway","type":"exact"},{"name":"negative regulation of toll-like receptor 12 signalling pathway","type":"exact"}],"termid":"GO:0034176"}


id: PBO:0038446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAR2 splicing factor","termid":"PBO:0038446"}


id: PBO:0050214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 31","termid":"PBO:0050214"}


id: MONDO:0010485
data:
  {"annotated_genes":["SJAG_03603"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87039],"is_not":false,"summary":null,"term":"MONDO:0010485"}]},"cv_name":"mondo","definition":"X-linked colobomatous microphthalmia-microcephaly-intellectual disability-short stature syndrome is a rare syndromic microphthalmia disorder characterized by microphthalmia with coloboma (which may involve the iris, cilary body, choroid, retina and/or optic nerve), microcephaly, short stature and intellectual disability. Other eye abnormalities such as pendular nystagmus, esotropia and ptosis may also be present. Additional associated abnormalities include kyphoscoliosis, anteverted pinnae with minimal convolutions, diastema of the incisors and congenital pes varus.","definition_xrefs":["Orphanet:431140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked disease","termid":"MONDO:0000425"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"syndromic microphthalmia","termid":"MONDO:0016073"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03603":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"X-linked colobomatous microphthalmia-microcephaly-intellectual disability-short stature syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3806742","DOID:0111811","MEDGEN:813072","OMIM:300915","GARD:17709"],"synonyms":[{"name":"MCOPS13","type":"related"},{"name":"Maine microphthalmos","type":"related"},{"name":"X-linked colobomatous microphthalmia-microcephaly-short stature-psychomotor retardation syndrome","type":"exact"},{"name":"colobomatous microphthalmia with microcephaly, short stature, and psychomotor retardation","type":"related"},{"name":"microphthalmia, syndromic 13","type":"related"},{"name":"microphthalmia, syndromic type 13","type":"exact"}],"termid":"MONDO:0010485","terms_by_termid":{"MONDO:0010485":null},"xrefs":{"Monarch":{"xref_id":"0010485"}}}


id: MOD:01442
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-valine residue and an L-tyrosine residue by an ether bond to form 3-(O4'-L-tyrosyl)-L-valine.","definition_xrefs":["RESID:AA0490","PubMed:19321420"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uncategorized crosslinked residues","termid":"MOD:00692"},{"relation_name":"is_a","term_name":"crosslinked L-tyrosine residue","termid":"MOD:02058"},{"relation_name":"is_a","term_name":"crosslinked L-valine residue","termid":"MOD:02059"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-(O4'-L-tyrosyl)-L-valine","synonyms":[{"name":"(2S)-2-amino-3-(4-[(2S)-2-amino-2-carboxyethyl]phenoxy)-3-methylbutanoic acid","type":"exact"},{"name":"3-(O4'-L-tyrosyl)-L-valine","type":"exact"},{"name":"CROSSLNK 3-(O4'-tyrosyl)-valine (Val-Tyr)","type":"exact"}],"termid":"MOD:01442"}


id: MONDO:0007627
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Focal facial dermal dysplasia type I (FFDD1), also known as Brauer syndrome, is a focal facial dysplasia (FFDD) characterized by congenital bitemporal cutis aplasia.","definition_xrefs":["Orphanet:79133"],"direct_ancestors":[{"relation_name":"is_a","term_name":"focal facial dermal dysplasia","termid":"MONDO:0018363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"focal facial dermal dysplasia type I","secondary_identifiers":["UMLS:C5235196","MEDGEN:1718224","GARD:16524","OMIM:136500"],"synonyms":[{"name":"Brauer syndrome","type":"exact"},{"name":"FFDD type I","type":"exact"},{"name":"FFDD, type 1","type":"related"},{"name":"FFDD1","type":"exact"},{"name":"bitemporal aplasia cutis congenita","type":"exact"},{"name":"focal facial dermal dysplasia 1, Brauer type","type":"exact"},{"name":"focal facial dermal dysplasia type 1","type":"exact"},{"name":"hereditary symmetrical aplastic nevi of temples","type":"related"}],"termid":"MONDO:0007627","xrefs":{"Monarch":{"xref_id":"0007627"}}}


id: PBO:0000506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin-containing T-complex beta subunit Cct2","termid":"PBO:0000506"}


id: GO:0003841
data:
  {"annotated_genes":["SJAG_01957","SJAG_04792","SJAG_04041"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73404,78567,91849],"is_not":false,"summary":null,"term":"GO:0003841"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-CoA + 1-acyl-sn-glycerol-3-phosphate = CoA + 1,2-diacyl-sn-glycerol-3-phosphate.","definition_xrefs":["GOC:ab","EC:2.3.1.51"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylglycerol O-acyltransferase activity","termid":"GO:0016411"},{"relation_name":"is_a","term_name":"lysophosphatidic acid acyltransferase activity","termid":"GO:0042171"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01957":null,"SJAG_04041":null,"SJAG_04792":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"1-acylglycerol-3-phosphate O-acyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-1623","GO:0004469","Reactome:R-HSA-1482598","Reactome:R-HSA-1482667","Reactome:R-HSA-8849345","Reactome:R-HSA-1482689","RHEA:19709","Reactome:R-HSA-1482539","Reactome:R-HSA-1482547","Reactome:R-HSA-1482548","Reactome:R-HSA-1482636","Reactome:R-HSA-1482894","Reactome:R-HSA-75885"],"synonyms":[{"name":"1-acyl-sn-glycero-3-phosphate acyltransferase activity","type":"related"},{"name":"1-acyl-sn-glycerol 3-phosphate acyltransferase activity","type":"related"},{"name":"1-acyl-sn-glycerol-3-phosphate acyltransferase activity","type":"exact"},{"name":"1-acylglycero-3-phosphate acyltransferase activity","type":"related"},{"name":"1-acylglycerolphosphate acyltransferase activity","type":"related"},{"name":"1-acylglycerophosphate acyltransferase activity","type":"related"},{"name":"acyl-CoA:1-acyl-sn-glycerol-3-phosphate 2-O-acyltransferase activity","type":"related"},{"name":"lysophosphatidate acyltransferase activity","type":"exact"},{"name":"lysophosphatidic acid-acyltransferase activity","type":"related"}],"termid":"GO:0003841","terms_by_termid":{"GO:0003841":null}}


id: PBO:0029635
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vegetative_cell_growth","termid":"PBO:0029635"}


id: PBO:0043756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COX7C pseudogene 4","termid":"PBO:0043756"}


id: PBO:0042917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFTR antisense RNA 1","termid":"PBO:0042917"}


id: PBO:0054094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1447","termid":"PBO:0054094"}


id: PBO:0076671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRPM8 channel associated factor 2 pseudogene 1","termid":"PBO:0076671"}


id: PBO:0045253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal light intermediate chain 1","termid":"PBO:0045253"}


id: GO:1903070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of ER-associated ubiquitin-dependent protein catabolic process.","definition_xrefs":["PMID:17872946","GO_REF:0000058","GOC:rph","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of ER-associated ubiquitin-dependent protein catabolic process (obsolete GO:1903070)","termid":"GO:1903070"}


id: PBO:0080987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZBTB20 antisense RNA 3","termid":"PBO:0080987"}


id: GO:0075184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of symbiont infection cushion formation.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"infection cushion formation","termid":"GO:0075183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of infection cushion formation","synonyms":[{"name":"regulation of infection cushion formation on or near host","type":"exact"}],"termid":"GO:0075184"}


id: PBO:0066203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 17 pseudogene 4","termid":"PBO:0066203"}


id: PBO:0029710
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_population_growth_at_high_pH","termid":"PBO:0029710"}


id: GO:0010719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of epithelial to mesenchymal transition. Epithelial to mesenchymal transition where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial to mesenchymal transition","termid":"GO:0010717"},{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"epithelial to mesenchymal transition","termid":"GO:0001837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of epithelial to mesenchymal transition","termid":"GO:0010719"}


id: GO:0000952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the catabolism of amino acids to produce carboxylic acids with one carbon less than the starting amino acid. In S. cerevisiae, this is known to occur for leucine, isoleucine, valine, methionine, phenylalanine, tyrosine, or tryptophan. When an aromatic family amino acid, phenylalanine, tyrosine, or tryptophan, is used as the substrate, 2-phenylethanoate, 4-hydroxyphenylethanoate, or 2-(Indol-3-yl)-ethanoate, respectively, is produced. Often referred to as the Ehrlich pathway, these reactions generally occur during fermentation to produce a variety of carboxylic acids, sometimes collectively referred to as fusel acids. Depending on the redox state of the cells, alcohol derivatives may be produced instead of carboxylic acids.","definition_xrefs":["PMID:18281432","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid catabolic process to carboxylic acid via Ehrlich pathway","termid":"GO:0000948"},{"relation_name":"is_a","term_name":"aromatic amino acid family catabolic process","termid":"GO:0009074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"aromatic amino acid family catabolic process to carboxylic acid via Ehrlich pathway","termid":"GO:0000952"}


id: PBO:0047181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 200 member B","termid":"PBO:0047181"}


id: MONDO:0003097
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mediastinal neural neoplasm","termid":"MONDO:0003098"},{"relation_name":"is_a","term_name":"childhood neoplasm","termid":"MONDO:0021079"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"childhood mediastinal neurogenic neoplasm","secondary_identifiers":["UMLS:C1332981","DOID:4690","MEDGEN:234134","NCIT:C5429"],"synonyms":[{"name":"childhood mediastinal neurogenic neoplasm","type":"exact"},{"name":"childhood mediastinal neurogenic tumor","type":"exact"},{"name":"childhood mediastinal neurogenic tumour","type":"exact"},{"name":"childhood neurogenic neoplasm of mediastinum","type":"exact"},{"name":"childhood neurogenic neoplasm of the mediastinum","type":"exact"},{"name":"childhood neurogenic tumor of mediastinum","type":"exact"},{"name":"childhood neurogenic tumor of the mediastinum","type":"exact"},{"name":"childhood neurogenic tumour of mediastinum","type":"exact"},{"name":"childhood neurogenic tumour of the mediastinum","type":"exact"},{"name":"paediatric mediastinal neurogenic neoplasm","type":"exact"},{"name":"paediatric mediastinal neurogenic tumour","type":"exact"},{"name":"paediatric neurogenic neoplasm of mediastinum","type":"exact"},{"name":"paediatric neurogenic neoplasm of the mediastinum","type":"exact"},{"name":"paediatric neurogenic tumour of mediastinum","type":"exact"},{"name":"paediatric neurogenic tumour of the mediastinum","type":"exact"},{"name":"pediatric mediastinal neurogenic neoplasm","type":"exact"},{"name":"pediatric mediastinal neurogenic tumor","type":"exact"},{"name":"pediatric neurogenic neoplasm of mediastinum","type":"exact"},{"name":"pediatric neurogenic neoplasm of the mediastinum","type":"exact"},{"name":"pediatric neurogenic tumor of mediastinum","type":"exact"},{"name":"pediatric neurogenic tumor of the mediastinum","type":"exact"}],"termid":"MONDO:0003097","xrefs":{"Monarch":{"xref_id":"0003097"}}}


id: MONDO:0018244
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited obesity","termid":"MONDO:0019182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obesity due to SIM1 deficiency","secondary_identifiers":["GARD:21580","Orphanet:369873","UMLS:C5191050","MEDGEN:1680592"],"termid":"MONDO:0018244","xrefs":{"Monarch":{"xref_id":"0018244"}}}


id: PBO:0027429
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_DNA_strand_elongation_involved_in_mitotic_DNA_replication_at_highly_transcribed_RNA_polymerase_II_genes","termid":"PBO:0027429"}


id: PBO:0005430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L37 (predicted)","termid":"PBO:0005430"}


id: PR:P78937
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sua1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P78937"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfate adenylyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC27.08c","synonyms":[{"name":"ATP-sulfurylase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SAT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-sua1","type":"exact"},{"name":"sulfate adenylate transferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78937"}


id: PBO:0057457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 576","termid":"PBO:0057457"}


id: MONDO:0002832
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare primary carcinoma of the endometrium characterized by the presence of malignant epithelial cells resembling urothelial transitional cells. The malignant transitional cells constitute at least 90% of the tumor cells.","definition_xrefs":["NCIT:C40154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endometrial carcinoma","termid":"MONDO:0002447"},{"relation_name":"is_a","term_name":"transitional cell carcinoma","termid":"MONDO:0006474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"endometrial transitional cell carcinoma","secondary_identifiers":["MEDGEN:273232","UMLS:C1516864","DOID:4005"],"synonyms":[{"name":"endometrial transitional cell carcinoma","type":"exact"}],"termid":"MONDO:0002832","xrefs":{"Monarch":{"xref_id":"0002832"}}}


id: PBO:0047992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 2 family member I, pseudogene","termid":"PBO:0047992"}


id: MONDO:0019583
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Localized lichen myxedematosus (LM) with mixed features of different subtypes is a form of atypical lichen myxedematosus, characterized by mixed features of the 5 subtypes of localized LM which are: discrete papular LM, acral persistent papular mucinosis, self-healing papular mucinosis, papular mucinosis of infancy, and nodular LM.","definition_xrefs":["Orphanet:90398"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atypical lichen myxedematosus","termid":"MONDO:0019447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"localized lichen myxedematosus with mixed features of different subtypes","secondary_identifiers":["MEDGEN:1843441","GARD:19142","UMLS:C5681465"],"termid":"MONDO:0019583","xrefs":{"Monarch":{"xref_id":"0019583"}}}


id: PBO:0055797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipoprotein(a) like 1","termid":"PBO:0055797"}


id: PBO:0066874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 174","termid":"PBO:0066874"}


id: PR:000036299
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribonucleoside-diphosphate reductase small chain that is encoded in the genome of Schizosaccharomyces pombe.","definition_xrefs":["PMID:12867051","PMID:20516199","PomBase:MAH","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoside-diphosphate reductase small chain","termid":"PR:000027713"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonucleoside-diphosphate reductase small chain (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC25D12.04","synonyms":[{"name":"SPBC25D12.04","type":"related"},{"name":"SUC22","type":"related"},{"name":"Spom-suc22","type":"exact"}],"termid":"PR:000036299"}


id: PBO:0043462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-NOT transcription complex subunit 3","termid":"PBO:0043462"}


id: MONDO:1012284
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Stomach ulcer that occurs in pigs.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stomach ulcer, non-human animal","termid":"MONDO:1011662"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stomach ulcer, pig","secondary_identifiers":["OMIA:001027-9823"],"termid":"MONDO:1012284","xrefs":{"Monarch":{"xref_id":"1012284"}}}


id: PBO:0030143
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_L-thialysine","termid":"PBO:0030143"}


id: MONDO:0042974
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Parainfluenza virus type 3 is one of a group of common viruses known as human parainfluenza viruses (HPIV) that cause a variety of respiratory illnesses. Symptoms usually develop between 2 and 7 days from the time of exposure and typically resolve in 7-10 days. Symptoms may include fever, runny nose, and cough. HPIV-3 can also cause bronchiolitis, bronchitis, and pneumonia. Infants and young children are particularly susceptible to HPIV-3 infections, though older adults and those with a weakened immune system are also at risk for complications. HPIVs are usually spread from an infected person to others through coughing, sneezing, and/or touching. There is currently no vaccine to protect against parainfluenza virus infections. Most HPIV infections resolve on their own and do not require special treatment, though medical intervention may be necessary for severe breathing problems. Most adults have antibodies against parainfluenza but can get repeat infections.","definition_xrefs":["GARD:0004215"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respirovirus infectious disease","termid":"MONDO:0005940"},{"relation_name":"is_a","term_name":"parainfluenza infectious disease","termid":"MONDO:0100197"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parainfluenza virus type 3 infectious disease","secondary_identifiers":["ICD9:079.89","GARD:4215","MEDGEN:547264","UMLS:C0276324","SCTID:30270006"],"synonyms":[{"name":"PIV3","type":"related"},{"name":"human parainfluenza virus type 3","type":"related"},{"name":"human respirovirus 3 caused disease or disorder","type":"exact"},{"name":"human respirovirus 3 disease or disorder","type":"exact"},{"name":"human respirovirus 3 infectious disease","type":"exact"},{"name":"infection caused by human parainfluenza virus 3","type":"related"},{"name":"infection caused by parainfluenza virus 3","type":"related"},{"name":"infection due to human parainfluenza virus 3","type":"exact"},{"name":"infection due to parainfluenza virus 3","type":"related"}],"termid":"MONDO:0042974","xrefs":{"Monarch":{"xref_id":"0042974"}}}


id: FYPO:0001257
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to the level of oxygen is normal (i.e. indistinguishable from wild type). Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein level during vegetative growth","termid":"FYPO:0000833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal protein level during cellular response to oxygen","synonyms":[{"name":"normal protein accumulation during cellular response to oxygen","type":"related"},{"name":"normal protein level during cellular response to oxygen during mitotic cell cycle","type":"related"},{"name":"normal protein level during cellular response to oxygen during vegetative growth","type":"exact"},{"name":"normal protein level during cellular response to oxygen levels","type":"exact"}],"termid":"FYPO:0001257"}


id: MONDO:1010697
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Citrullinemia that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"citrullinemia, non-human animal","termid":"MONDO:1010095"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"citrullinaemia, cattle","secondary_identifiers":["OMIA:000194-9913"],"termid":"MONDO:1010697","xrefs":{"Monarch":{"xref_id":"1010697"}}}


id: GO:0039605
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Selective and non-covalent interaction of a viral protein with a member of the TFIIB-class of host transcription factors, which contributes to the viral-suppression of assembly of the RNA polymerase II preinitiation complex (PIC) at an RNA polymerase II promoter region of a host DNA template.","definition_xrefs":["GOC:vw","PMID:18768974"],"gene_count":0,"genotype_count":0,"name":"obsolete TFIIB-class transcription factor binding involved in viral suppression of host transcription initiation from RNA polymerase II promoter (obsolete GO:0039605)","termid":"GO:0039605"}


id: PBO:0060895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuraminidase 4","termid":"PBO:0060895"}


id: GO:0106140
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a P-TEFb complex.","definition_xrefs":["PMID:18391197","GOC:pga"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"P-TEFb complex binding","termid":"GO:0106140"}


id: MOD:01353
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["PubMed:6273432","Unimod:141#K","PubMed:15602776","PubMed:12643539"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amidination of lysines or N-terminal amines with methyl acetimidate","termid":"MOD:00509"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amidination of lysines or N-terminal amines with methyl acetimidate - site K","synonyms":[{"name":"Amidine","type":"related"},{"name":"amidination of lysines or N-terminal amines with methyl acetimidate","type":"related"}],"termid":"MOD:01353"}


id: PBO:0082135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Actin-related protein of the dynactin complex; required for spindle orientation and nuclear migration; forms actin-like short filament composed of 9 or 10 Arp1p monomers; putative ortholog of mammalian centractin","termid":"PBO:0082135"}


id: PBO:0051899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit alpha 7","termid":"PBO:0051899"}


id: MONDO:0010467
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Xq27.3q28 duplication syndrome is a recently described syndrome characterized by short stature, hypogonadism, developmental delay and facial dysmorphism.","definition_xrefs":["Orphanet:261483"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of the long arm of chromosome X","termid":"MONDO:0017010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Xq27.3q28 duplication syndrome","secondary_identifiers":["UMLS:C3275521","OMIM:300869","GARD:17247","MEDGEN:477152"],"synonyms":[{"name":"Xq27.3-q28 microduplication syndrome","type":"exact"},{"name":"chromosome Xq27.3-q28 DUPLICATION syndrome","type":"related"},{"name":"chromosome xq27.3-q28 duplication syndrome, X-linked recessive","type":"exact"},{"name":"dup(X)(q27.3q28)","type":"exact"},{"name":"trisomy Xq27.3-q28","type":"exact"},{"name":"trisomy Xq27.3q28","type":"exact"}],"termid":"MONDO:0010467","xrefs":{"Monarch":{"xref_id":"0010467"}}}


id: GO:0021632
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the optic nerve to attain its fully functional state. The sensory optic nerve originates from the bipolar cells of the retina and conducts visual information to the brainstem. The optic nerve exits the back of the eye in the orbit, enters the optic canal, and enters the central nervous system at the optic chiasm (crossing) where the nerve fibers become the optic tract just prior to entering the hindbrain.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:dph","GOC:cls","GOC:jid","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve maturation","termid":"GO:0021605"},{"relation_name":"part_of","term_name":"optic nerve development","termid":"GO:0021554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"optic nerve maturation","synonyms":[{"name":"CN II maturation","type":"exact"}],"termid":"GO:0021632"}


id: PBO:0051639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IMP3 pseudogene 2","termid":"PBO:0051639"}


id: GO:2000126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of octopamine or tyramine signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of G protein-coupled receptor signaling pathway","termid":"GO:0045744"},{"relation_name":"is_a","term_name":"regulation of octopamine or tyramine signaling pathway","termid":"GO:2000125"},{"relation_name":"negatively_regulates","term_name":"octopamine or tyramine signaling pathway","termid":"GO:0007211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of octopamine or tyramine signaling pathway","synonyms":[{"name":"negative regulation of octopamine or tyramine signalling pathway","type":"exact"},{"name":"negative regulation of octopamine/tyramine signaling pathway","type":"exact"}],"termid":"GO:2000126"}


id: MONDO:0019958
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete insulinoma (obsolete MONDO:0019958)","termid":"MONDO:0019958","xrefs":{"Monarch":{"xref_id":"0019958"}}}


id: PBO:0000856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABC1 kinase family protein (predicted)","termid":"PBO:0000856"}


id: PBO:0043414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiomyopathy associated 5","termid":"PBO:0043414"}


id: MONDO:0001894
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sarcoma that arises from the spinal cord.","definition_xrefs":["NCIT:C5152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system sarcoma","termid":"MONDO:0002217"},{"relation_name":"is_a","term_name":"spinal cord cancer","termid":"MONDO:0003544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"spinal cord sarcoma","secondary_identifiers":["MEDGEN:233459","UMLS:C1336049","DOID:14152"],"synonyms":[{"name":"sarcoma of spinal cord","type":"exact"},{"name":"sarcoma of the spinal cord","type":"exact"},{"name":"spinal cord sarcoma","type":"exact"}],"termid":"MONDO:0001894","xrefs":{"Monarch":{"xref_id":"0001894"}}}


id: PBO:0075690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"steroid 5 alpha-reductase 1 pseudogene 1","termid":"PBO:0075690"}


id: MONDO:0015948
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare genetic skin vascular disorder (obsolete MONDO:0015948)","secondary_identifiers":["Orphanet:183478"],"synonyms":[{"name":"genetic skin vascular disorder","type":"related"}],"termid":"MONDO:0015948","xrefs":{"Monarch":{"xref_id":"0015948"}}}


id: PBO:0017872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerophosphodiester transmembrane transporter (predicted)","termid":"PBO:0017872"}


id: PBO:0082155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Adaptor protein involved in vesicle-mediated vacuolar protein sorting; multivalent adaptor protein; facilitates vesicle-mediated vacuolar protein sorting by ensuring high-fidelity vesicle docking and fusion, which are essential for targeting of vesicles to the endosome; required for vacuole inheritance","termid":"PBO:0082155"}


id: PATO:0001323
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A 2-D extent quality inhering in a bearer by virtue of the bearer's two dimensional extent.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Area"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-D extent","termid":"PATO:0001709"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"area","termid":"PATO:0001323"}


id: MONDO:0018250
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"diffuse palmoplantar keratoderma","termid":"MONDO:0017666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"diffuse palmoplantar keratoderma with painful fissures","secondary_identifiers":["Orphanet:369999","GARD:17595","UMLS:C4755309","MEDGEN:1660049"],"termid":"MONDO:0018250","xrefs":{"Monarch":{"xref_id":"0018250"}}}


id: PR:O14352
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lsm4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14352"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U6 snRNA-associated Sm-like protein LSm4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30D10.06","synonyms":[{"name":"Spom972h-lsm4","type":"exact"}],"termid":"PR:O14352"}


id: GO:0120503
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an (omega-1)-ethyl medium-chain fatty acid + O2 + reduced [NADPH-hemoprotein reductase] = an (omega-1)-hydroxy-medium-chain fatty acid + H+ + H2O + oxidized [NADPH-hemoprotein reductase. A medium-chain fatty acid has an aliphatic tail containing 6 to 12 carbons.","definition_xrefs":["PMID:35934685"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid omega-1 hydroxylase activity","termid":"GO:0120502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"medium-chain fatty acid omega-1 hydroxylase activity","termid":"GO:0120503"}


id: PBO:0090479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB/POZ family ubiquitin-type ligase substrate adaptor Btb1","termid":"PBO:0090479"}


id: GO:1901441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of poly(hydroxyalkanoate).","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"poly(hydroxyalkanoate) metabolic process","termid":"GO:1901440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"poly(hydroxyalkanoate) biosynthetic process","synonyms":[{"name":"poly(hydroxyalkanoate) anabolism","type":"exact"},{"name":"poly(hydroxyalkanoate) biosynthesis","type":"exact"},{"name":"poly(hydroxyalkanoate) formation","type":"exact"},{"name":"poly(hydroxyalkanoate) synthesis","type":"exact"}],"termid":"GO:1901441"}


id: PBO:0027228
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_1,2-dioctanoyl-sn-glycerol","termid":"PBO:0027228"}


id: GO:0102190
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4alpha-formyl-5alpha-cholesta-7,24-dien-3beta-ol + O2 + NADH(2-) = 4alpha-carboxy-5alpha-cholesta-7,24-dien-3beta-ol + NAD(1-) + H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 4alpha-formyl-5alpha-cholesta-7,24-dien-3beta-ol-4alpha-methyl oxidase activity (obsolete GO:0102190)","termid":"GO:0102190"}


id: FYPO:0006233
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the vacuolar membrane is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to vacuolar membrane","termid":"FYPO:0004249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to vacuolar membrane","synonyms":[{"name":"decreased protein localisation to vacuolar membrane","type":"exact"},{"name":"decreased protein localization in vacuolar membrane","type":"exact"},{"name":"decreased protein localization to vacuolar membrane during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to vacuolar membrane during vegetative growth","type":"exact"},{"name":"decreased protein localization to vacuole membrane","type":"exact"},{"name":"reduced protein localization to vacuolar membrane","type":"exact"}],"termid":"FYPO:0006233"}


id: PR:O74453
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A p21-activated protein kinase-interacting protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04409","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shk1 kinase-binding protein 15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16C4.08c","secondary_identifiers":["UniProtKB:O74453"],"synonyms":[{"name":"Spom972h-PAK1IP1","type":"exact"}],"termid":"PR:O74453"}


id: MONDO:0019134
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Central neurocytoma is a very rare brain tumor of young adults (over 100 cases reported worldwide). It is typically found in the lateral ventricles and occasionally in the third ventricle. Symptoms are those of increased intracranial pressure: headache, nausea and vomiting, drowsiness, vision problems and mental changes. Total removal of the tumor is the therapy of choice. Post-operative prognosis is generally good.","definition_xrefs":["Orphanet:73256"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"cerebral ventricle cancer","termid":"MONDO:0002682"},{"relation_name":"is_a","term_name":"cerebral ventricle cancer","termid":"MONDO:0002682"},{"relation_name":"is_a","term_name":"mixed neuronal-glial tumor","termid":"MONDO:0016729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"central neurocytoma","secondary_identifiers":["GARD:10641","NCIT:C3791","DOID:14174","ICDO:9506/1","MESH:D018306","UMLS:C0206719","icd11.foundation:1247650801","icd11.foundation:2039766091","MEDGEN:104924","ONCOTREE:CNC"],"synonyms":[{"name":"CNC","type":"related"},{"name":"Neurolipocytoma","type":"exact"},{"name":"central neurocytoma (WHO grade II)","type":"exact"}],"termid":"MONDO:0019134","xrefs":{"Monarch":{"xref_id":"0019134"}}}


id: GO:0019060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a viral protein within the host cell.","definition_xrefs":["PMID:9188566","PMID:11581394","GOC:ai","ISBN:0781718325","ISBN:0781702534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont intracellular protein transport in host","termid":"GO:0030581"},{"relation_name":"part_of","term_name":"regulation by virus of viral protein levels in host cell","termid":"GO:0046719"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"intracellular transport of viral protein in host cell","secondary_identifiers":["GO:0046801","GO:0046742","GO:0046743","Reactome:R-HSA-168874"],"synonyms":[{"name":"cytoplasmic viral capsid transport","type":"narrow"},{"name":"intracellular transport of viral capsid in host cell","type":"narrow"},{"name":"intracellular transport of viral capsid protein in host cell","type":"narrow"},{"name":"intracellular transport of viral proteins in host cell","type":"exact"},{"name":"intracellular viral capsid transport","type":"narrow"},{"name":"intracellular viral protein transport","type":"exact"},{"name":"nuclear viral capsid transport","type":"narrow"},{"name":"viral capsid transport in host cell cytoplasm","type":"narrow"},{"name":"viral capsid transport in host cell nucleus","type":"narrow"}],"termid":"GO:0019060"}


