# terms

id: PBO:0116293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Myosin-like protein associated with the nuclear envelope; nuclear basket protein that connects the nuclear pore complex (NPC) with the nuclear interior; involved with Tel1p in telomere length control; forms a coiled-coil parallel homodimer; recruitment and docking of Mlp1p filaments onto the NPC Y-complex involves Nup60p; involved along with Pml1p and Pml39p in nuclear retention of unspliced mRNAs; MLP1 has a paralog, MLP2, that arose from the whole genome duplication","termid":"PBO:0116293"}


id: PBO:0090915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial tryptophan-tRNA ligase Msw1","termid":"PBO:0090915"}


id: RO:0002235
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A parasite-of relationship in which the host is a plant and the parasite that attaches to the host stem (PO:0009047)","direct_ancestors":[{"relation_name":"is_a","term_name":"parasite_of","termid":"RO:0002444"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stem_parasite_of","termid":"RO:0002235"}


id: GO:2000566
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of CD8-positive, alpha-beta T cell proliferation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of alpha-beta T cell proliferation","termid":"GO:0046641"},{"relation_name":"is_a","term_name":"regulation of CD8-positive, alpha-beta T cell proliferation","termid":"GO:2000564"},{"relation_name":"is_a","term_name":"positive regulation of CD8-positive, alpha-beta T cell activation","termid":"GO:2001187"},{"relation_name":"positively_regulates","term_name":"CD8-positive, alpha-beta T cell proliferation","termid":"GO:0035740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of CD8-positive, alpha-beta T cell proliferation","termid":"GO:2000566"}


id: PBO:0062959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein cytoplasmic 1 pseudogene 2","termid":"PBO:0062959"}


id: PBO:0080817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-3' exoribonuclease 2","termid":"PBO:0080817"}


id: PBO:0076034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 32B","termid":"PBO:0076034"}


id: PBO:0053882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1162","termid":"PBO:0053882"}


id: GO:1902315
data:
  {"annotated_genes":["SJAG_04995","SJAG_01210","SJAG_04341","SJAG_03160","SJAG_00884","SJAG_02074","SJAG_01823","SJAG_02607","SJAG_02667","SJAG_05239","SJAG_04671","SJAG_00399","SJAG_02162","SJAG_01762","SJAG_00364","SJAG_03451","SJAG_03720","SJAG_00874","SJAG_03048","SJAG_03695","SJAG_03438","SJAG_02908","SJAG_00857","SJAG_02172","SJAG_04210","SJAG_01354","SJAG_02348","SJAG_04879"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104780],"is_not":false,"summary":null,"term":"GO:1902315"},{"annotations":[109183,115425,117265,111788],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140529"},{"annotations":[105143],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140530"},{"annotations":[101236,119203,93779,75185,109186,101173,117269,112411,115015,96365,113241,109078,105145,57271,72704,63834,76475],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902975"},{"annotations":[104191,110737,99588],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1903467"},{"annotations":[119144,113893],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903468"},{"annotations":[118094,108455,90875,104197],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1904514"}]},"cv_name":"biological_process","definition":"Any DNA replication initiation that is involved in nuclear cell cycle DNA replication.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle DNA replication initiation","termid":"GO:1902292"},{"relation_name":"part_of","term_name":"nuclear DNA replication","termid":"GO:0033260"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_00399":null,"SJAG_00857":null,"SJAG_00874":null,"SJAG_00884":null,"SJAG_01210":null,"SJAG_01354":null,"SJAG_01762":null,"SJAG_01823":null,"SJAG_02074":null,"SJAG_02162":null,"SJAG_02172":null,"SJAG_02348":null,"SJAG_02607":null,"SJAG_02667":null,"SJAG_02908":null,"SJAG_03048":null,"SJAG_03160":null,"SJAG_03438":null,"SJAG_03451":null,"SJAG_03695":null,"SJAG_03720":null,"SJAG_04210":null,"SJAG_04341":null,"SJAG_04671":null,"SJAG_04879":null,"SJAG_04995":null,"SJAG_05239":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006260","GO:0006259","GO:0007049"],"is_obsolete":false,"name":"nuclear cell cycle DNA replication initiation","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"DNA endoreduplication initiation involved in nuclear cell cycle DNA replication","type":"narrow"},{"name":"DNA re-replication initiation involved in nuclear cell cycle DNA replication","type":"narrow"},{"name":"DNA replication initiation involved in nuclear cell cycle DNA replication","type":"exact"}],"termid":"GO:1902315","terms_by_termid":{"GO:0140529":null,"GO:0140530":null,"GO:1902315":null,"GO:1902975":null,"GO:1903467":null,"GO:1903468":null,"GO:1904514":null}}


id: PBO:0067161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 214, pseudogene","termid":"PBO:0067161"}


id: FYPO:0007226
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at one or more heterochromatin islands is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal chromatin silencing","termid":"FYPO:0002335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal chromatin silencing at heterochromatin island","synonyms":[{"name":"normal chromatin silencing at heterochromatin island during mitotic cell cycle","type":"related"},{"name":"normal chromatin silencing at heterochromatin island during vegetative growth","type":"exact"}],"termid":"FYPO:0007226"}


id: PBO:0078809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 26-1","termid":"PBO:0078809"}


id: GO:0047937
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 D-glucose 1-phosphate = D-glucose + D-glucose 1,6-bisphosphate.","definition_xrefs":["EC:2.7.1.41","MetaCyc:GLUCOSE-1-PHOSPHATE-PHOSPHODISMUTASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016301","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"glucose-1-phosphate phosphodismutase activity","secondary_identifiers":["RHEA:16397"],"synonyms":[{"name":"D-glucose-1-phosphate:D-glucose-1-phosphate 6-phosphotransferase activity","type":"related"},{"name":"glucose 1-phosphate transphosphorylase activity","type":"related"},{"name":"phosphodismutase activity","type":"related"}],"termid":"GO:0047937"}


id: PBO:0049736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemoglobin subunit alpha 2","termid":"PBO:0049736"}


id: PBO:0067483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 617, pseudogene","termid":"PBO:0067483"}


id: GO:0022876
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + galactosamine(out) = protein histidine + galactosamine phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-N(PI)-phosphohistidine-sugar phosphotransferase activity","termid":"GO:0008982"},{"relation_name":"is_a","term_name":"galactosamine transmembrane transporter activity","termid":"GO:0019196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003824","GO:0022857","GO:0016740","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"protein-N(PI)-phosphohistidine-galactosamine phosphotransferase system transporter activity","synonyms":[{"name":"galactosamine PTS transporter activity","type":"exact"}],"termid":"GO:0022876"}


id: GO:0102711
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: gibberellin A25 + 2-oxoglutarate + O2 = gibberellin A13 + succinate + carbon dioxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete gibberellin A25,oxoglutarate:oxygen oxidoreductase activity (obsolete GO:0102711)","termid":"GO:0102711"}


id: GO:0010121
data:
  {"annotated_genes":["SJAG_03398","SJAG_00495"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80145,115062],"is_not":false,"summary":null,"term":"GO:0010121"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of arginine into other compounds, including proline, via ornithine.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-arginine catabolic process to L-proline","termid":"GO:0019493"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00495":null,"SJAG_03398":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"L-arginine catabolic process to proline via ornithine","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"arginine breakdown to proline via ornithine","type":"exact"},{"name":"arginine degradation to proline via ornithine","type":"exact"}],"termid":"GO:0010121","terms_by_termid":{"GO:0010121":null}}


id: PBO:0083288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; null mutant displays shortened telomeres; partially overlaps the uncharacterized ORF YMR031C","termid":"PBO:0083288"}


id: PBO:0054304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1696","termid":"PBO:0054304"}


id: PBO:0041921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonyl reductase 4","termid":"PBO:0041921"}


id: PBO:0042149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 8","termid":"PBO:0042149"}


id: PBO:0075497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 42","termid":"PBO:0075497"}


id: PBO:0082964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic protein of unknown function; possibly involved in vacuolar protein degradation; not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase); null mutants exhibit normal growth; contains two PH-like domains","termid":"PBO:0082964"}


id: PBO:0028653
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_snRNA_3'-end_processing","termid":"PBO:0028653"}


id: PBO:0067984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 286","termid":"PBO:0067984"}


id: PBO:0030786
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_aseptate_vegetative_cell","termid":"PBO:0030786"}


id: PBO:0039455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 6","termid":"PBO:0039455"}


id: PBO:0116677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF like GTPase 8B","termid":"PBO:0116677"}


id: GO:0055044
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The interconnected cell membranes and intracellular regions of a plant. The interconnections occur via the plasmodesmata.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"symplast","secondary_identifiers":["Wikipedia:Symplast"],"termid":"GO:0055044"}


id: MONDO:0012318
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukemia, chronic lymphocytic, susceptibility to, 1","secondary_identifiers":["MEDGEN:351271","OMIM:609630","UMLS:C1864995"],"synonyms":[{"name":"Clls1","type":"related"},{"name":"leukemia, chronic lymphocytic, susceptibility to, 1","type":"exact"},{"name":"leukemia, chronic lymphocytic, susceptibility to, type 1","type":"exact"}],"termid":"MONDO:0012318","xrefs":{"Monarch":{"xref_id":"0012318"}}}


id: PBO:0070671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 42","termid":"PBO:0070671"}


id: SO:0001460
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding site that, in an insulator region of a nucleotide molecule, interacts selectively and non-covalently with polypeptide residues.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide_to_protein_binding_site","termid":"SO:0001654"},{"relation_name":"part_of","term_name":"insulator","termid":"SO:0000627"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulator_binding_site","synonyms":[{"name":"insulator binding site","type":"related"}],"termid":"SO:0001460"}


id: PBO:0071885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 23","termid":"PBO:0071885"}


id: PBO:0084633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Methyltransferase required for m3U2634 methylation of the 25S rRNA; S-adenosylmethionine-dependent; associates with precursors of the 60S ribosomal subunit; predicted to be involved in ribosome biogenesis","termid":"PBO:0084633"}


id: GO:0048045
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: all-trans-pentaprenyl diphosphate + isopentenyl diphosphate = all-trans-hexaprenyl diphosphate + diphosphate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete trans-pentaprenyltranstransferase activity (obsolete GO:0048045)","synonyms":[{"name":"all-trans-hexaprenyl-diphosphate synthase activity","type":"related"},{"name":"all-trans-pentaprenyl-diphosphate:isopentenyl-diphosphate pentaprenyltranstransferase activity","type":"related"},{"name":"hexaprenyl diphosphate synthase activity","type":"related"},{"name":"hexaprenyl pyrophosphate synthetase activity","type":"exact"}],"termid":"GO:0048045"}


id: PBO:0028423
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-RNA_absent_from_cell_during_meiosis","termid":"PBO:0028423"}


id: PBO:0076449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAFA chemokine like family member 5","termid":"PBO:0076449"}


id: MONDO:1010978
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Huntington disease that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Huntington disease, non-human animal","termid":"MONDO:1010231"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Huntington disease, sheep","secondary_identifiers":["OMIA:000485-9940"],"termid":"MONDO:1010978","xrefs":{"Monarch":{"xref_id":"1010978"}}}


id: GO:0010571
data:
  {"annotated_genes":["SJAG_03048","SJAG_03160","SJAG_00364","SJAG_03695","SJAG_03720","SJAG_03438"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[119144,113893],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903468"},{"annotations":[108455,118094,90875,104197],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904514"},{"annotations":[104201],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903465"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the DNA-dependent DNA replication that occurs in the nucleus of eukaryotic organisms as part of the cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nuclear cell cycle DNA replication","termid":"GO:0033262"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"is_a","term_name":"positive regulation of DNA-templated DNA replication","termid":"GO:2000105"},{"relation_name":"positively_regulates","term_name":"nuclear DNA replication","termid":"GO:0033260"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_03048":null,"SJAG_03160":null,"SJAG_03438":null,"SJAG_03695":null,"SJAG_03720":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0006260"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0006260","GO:0006259"],"is_obsolete":false,"name":"positive regulation of nuclear cell cycle DNA replication","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of DNA replication during S phase","type":"related"},{"name":"positive regulation of DNA replication involved in S phase","type":"exact"},{"name":"positive regulation of DNA replication involved in S-phase","type":"exact"}],"termid":"GO:0010571","terms_by_termid":{"GO:1903465":null,"GO:1903468":null,"GO:1904514":null}}


id: PBO:0049752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxycarboxylic acid receptor 2","termid":"PBO:0049752"}


id: GO:0021609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the accessory nerve This process pertains to the physical shaping of a rudimentary structure. The spinal branch of this motor nerve innervates the trapezius and the sternocleidomastoid muscles. The cranial branch joins the vagus nerve and innervates the same targets as the vagus nerve.","definition_xrefs":["GOC:dgh","GOC:cls","GOC:jid","ISBN:0838580343","GOC:dph","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve structural organization","termid":"GO:0021604"},{"relation_name":"part_of","term_name":"accessory nerve morphogenesis","termid":"GO:0021607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"accessory nerve structural organization","synonyms":[{"name":"CN XI structural organization","type":"related"},{"name":"accessory nerve structural organisation","type":"exact"}],"termid":"GO:0021609"}


id: PBO:0075333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorbin and SH3 domain containing 2","termid":"PBO:0075333"}


id: PBO:0039089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiotensin II receptor associated protein","termid":"PBO:0039089"}


id: GO:0034633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of retinol into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Retinol is vitamin A1, 2,6,6-trimethyl-1-(9'-hydroxy-3',7'-dimethylnona-1',3',5',7'-tetraenyl)cyclohex-1-ene, one of the three components that makes up vitamin A.","definition_xrefs":["GOC:vk","GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"terpenoid transport","termid":"GO:0046865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"retinol transport","synonyms":[{"name":"vitamin A1 transport","type":"exact"}],"termid":"GO:0034633"}


id: GO:0047224
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-O-N-acetyl-D-galactosalaminyl-[protein] + UDP-N-acetyl-D-glucosamine = 3-O-N-acetyl-beta-D-glucosaminyl-1,3-N-acetyl-D-galactosaminyl-[protein] + UDP. Linkage of the glycan to the protein occurs via the oxygen atom in the side chain of an L-serine or L-threonine residue.","definition_xrefs":["EC:2.4.1.147"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a glycoprotein","termid":"GO:0140103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003824","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"acetylgalactosaminyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.147-RXN"],"synonyms":[{"name":"O-glycosyl-oligosaccharide-glycoprotein N-acetylglucosaminyltransferase III activity","type":"related"},{"name":"UDP-N-acetyl-D-glucosamine:O-glycosyl-glycoprotein (N-acetyl-D-glucosamine to N-acetyl-D-galactosaminyl-R) beta-1,3-N-acetyl-D-glucosaminyltransferase activity","type":"related"},{"name":"core 3-beta-GlcNAc-transferase activity","type":"related"},{"name":"core 3beta-GlcNAc-transferase activity","type":"related"},{"name":"mucin core 3 beta3-GlcNAc-transferase activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine-mucin beta(1->3)-acetylglucosaminyltransferase activity","type":"related"}],"termid":"GO:0047224"}


id: PBO:0036053
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H3-K9_methylation_at_telomere_during_vegetative_growth","termid":"PBO:0036053"}


id: PBO:0004896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ/TPR domain protein DNAJC7 family","termid":"PBO:0004896"}


id: PBO:0062074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 5","termid":"PBO:0062074"}


id: PBO:0120353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRELD disulfide isomerase 1","termid":"PBO:0120353"}


id: FYPO:0008252
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of any RNA transcribed from long terminal repeat elements (LTRs) measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:25356590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal LTR-derived RNA level","termid":"FYPO:0008252"}


id: FYPO:0002385
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to heterochromatin is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to heterochromatin during vegetative growth","termid":"FYPO:0001131"},{"relation_name":"is_a","term_name":"decreased protein localization to chromatin during vegetative growth","termid":"FYPO:0002909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to heterochromatin during vegetative growth","synonyms":[{"name":"decreased protein localisation to heterochromatin during vegetative growth","type":"exact"},{"name":"decreased protein localization to heterochromatin during mitotic cell cycle","type":"related"},{"name":"reduced protein localization to heterochromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0002385"}


id: PBO:0070857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13 pseudogene 10","termid":"PBO:0070857"}


id: PBO:0045622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 34 (pseudogene)","termid":"PBO:0045622"}


id: PBO:0003622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RINT1 family protein (predicted)","termid":"PBO:0003622"}


id: GO:0006660
data:
  {"annotated_genes":["SJAG_02100"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76088],"is_not":false,"summary":null,"term":"GO:0006660"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of phosphatidylserines, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of L-serine.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylserine metabolic process","termid":"GO:0006658"},{"relation_name":"is_a","term_name":"modified amino acid catabolic process","termid":"GO:0042219"},{"relation_name":"is_a","term_name":"glycerophospholipid catabolic process","termid":"GO:0046475"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02100":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"phosphatidylserine catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"phosphatidylserine breakdown","type":"exact"},{"name":"phosphatidylserine catabolism","type":"exact"},{"name":"phosphatidylserine degradation","type":"exact"}],"termid":"GO:0006660","terms_by_termid":{"GO:0006660":null}}


id: FYPO:0005339
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is increased during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to nucleus during vegetative growth","termid":"FYPO:0001130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased protein localization to nucleus during cellular response to hydroxyurea","synonyms":[{"name":"increased protein localisation to nucleus during cellular response to hydroxyurea","type":"exact"},{"name":"increased protein localization to nucleus during cellular response to HU","type":"exact"},{"name":"increased protein localization to nucleus during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"increased protein localization to nucleus during cellular response to hydroxyurea during vegetative growth","type":"exact"}],"termid":"FYPO:0005339"}


id: PBO:0041146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTF3 pseudogene 1","termid":"PBO:0041146"}


id: PBO:0090561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase, Sirtuin family, NAD-dependent Sir2","termid":"PBO:0090561"}


id: PR:O42645
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A secretion-regulating guanine nucleotide exchange factor that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00488"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RCC1 repeat-containing protein C10F6.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC10F6.04","secondary_identifiers":["UniProtKB:O42645"],"synonyms":[{"name":"Spom972h-SERGEF","type":"exact"}],"termid":"PR:O42645"}


id: PR:O14067
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1687.08 gene.","definition_xrefs":["UniProtKB:O14067","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1687.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1687.08","synonyms":[{"name":"Spom972h-SPAC1687.08","type":"exact"}],"termid":"PR:O14067"}


id: PBO:0045779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epithelial cell transforming 2 like","termid":"PBO:0045779"}


id: MONDO:0100257
data:
  {"annotated_genes":["SJAG_00702","SJAG_04823","SJAG_00326"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87753],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013571"},{"annotations":[88094],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009958"},{"annotations":[87828],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008972"},{"annotations":[87673],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014743"}]},"cv_name":"mondo","definition":"Any peroxisomal disease in which the cause of the disease is a defect in a single enyme or protein.","direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisomal disease","termid":"MONDO:0019053"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00326":null,"SJAG_00702":null,"SJAG_04823":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0019053","MONDO:0005066"],"is_obsolete":false,"name":"peroxisomal single enzyme/protein defect","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"peroxisomal single enzyme/protein defect","type":"exact"}],"termid":"MONDO:0100257","terms_by_termid":{"MONDO:0008972":null,"MONDO:0009958":null,"MONDO:0013571":null,"MONDO:0014743":null},"xrefs":{"Monarch":{"xref_id":"0100257"}}}


id: PBO:0083207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the verified gene YJL197C/UBP12","termid":"PBO:0083207"}


id: GO:0071561
data:
  {"annotated_genes":["SJAG_01329","SJAG_04221","SJAG_04552","SJAG_01116"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[79028,108158,108859,117062],"is_not":false,"summary":null,"term":"GO:0071561"}]},"cv_name":"cellular_component","definition":"An organelle membrane contact site formed between the vacuole membrane and the outer nuclear membrane. In S. cerevisiae these contacts are mediated through direct physical interaction between Vac8p and Nvj1p.","definition_xrefs":["PMID:16709156","PMID:16806880","GOC:jp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle membrane contact site","termid":"GO:0044232"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01116":null,"SJAG_01329":null,"SJAG_04221":null,"SJAG_04552":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"nucleus-vacuole junction","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"NV junction","type":"exact"},{"name":"NVJ","type":"exact"},{"name":"nucleus-vacuole membrane contact site","type":"exact"}],"termid":"GO:0071561","terms_by_termid":{"GO:0071561":null}}


id: PBO:0072434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S28 pseudogene 8","termid":"PBO:0072434"}


id: MONDO:0009447
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ichthyosis, split hairs, and amino aciduria","secondary_identifiers":["OMIM:242550","UMLS:C1855786","MESH:C565471","MEDGEN:344576"],"synonyms":[{"name":"ichthyosis, split hairs, and amino aciduria","type":"exact"}],"termid":"MONDO:0009447","xrefs":{"Monarch":{"xref_id":"0009447"}}}


id: GO:0052085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont interferes with, inhibits or disrupts the normal execution of the T-cell mediated immune response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host adaptive immune response","termid":"GO:0039504"},{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host T-cell mediated immune response","termid":"GO:0052156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host T-cell mediated immune response","secondary_identifiers":["GO:0052280"],"synonyms":[{"name":"down regulation by symbiont of host T-cell mediated immune response","type":"exact"},{"name":"down-regulation by symbiont of host T-cell mediated immune response","type":"exact"},{"name":"downregulation by symbiont of host T-cell mediated immune response","type":"exact"},{"name":"inhibition by symbiont of host T-cell mediated immune response","type":"narrow"},{"name":"negative regulation by organism of T-cell mediated immune response of other organism involved in symbiotic interaction","type":"broad"},{"name":"negative regulation by symbiont of host T-cell mediated immune response","type":"exact"},{"name":"suppression by symbiont of host T-cell mediated immune response","type":"exact"},{"name":"suppression of host T-cell mediated immune response","type":"exact"}],"termid":"GO:0052085"}


id: PBO:0036247
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human COQ4","termid":"PBO:0036247"}


id: PBO:0039526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD33B pseudogene 7","termid":"PBO:0039526"}


id: GO:0018724
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4-phenanthrol + X-SO3(-) = HX + 4-phenanthrylsulfate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 4-phenanthrol sulfotransferase activity (obsolete GO:0018724)","synonyms":[{"name":"4-phenanthrol sulphotransferase activity","type":"exact"}],"termid":"GO:0018724"}


id: GO:1900231
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of single-species biofilm formation on inanimate substrate.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of single-species biofilm formation","termid":"GO:1900190"},{"relation_name":"regulates","term_name":"single-species biofilm formation on inanimate substrate","termid":"GO:0044011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of single-species biofilm formation on inanimate substrate","termid":"GO:1900231"}


id: PBO:0120330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TENM2 antisense RNA 4","termid":"PBO:0120330"}


id: GO:0120168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a hot stimulus is received and converted into a molecular signal as part of thermoception.","definition_xrefs":["PMID:21335241"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of temperature stimulus involved in thermoception","termid":"GO:0050960"},{"relation_name":"part_of","term_name":"sensory perception of hot stimulus","termid":"GO:0062036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of hot stimulus involved in thermoception","synonyms":[{"name":"sensory detection of heat stimulus during thermoception","type":"exact"},{"name":"sensory detection of hot stimulus during thermoception","type":"exact"},{"name":"sensory transduction of heat stimulus during thermoception","type":"exact"},{"name":"sensory transduction of hot stimulus during thermoception","type":"exact"},{"name":"thermoception, sensory detection of heat stimulus","type":"exact"},{"name":"thermoception, sensory detection of hot stimulus","type":"exact"},{"name":"thermoception, sensory transduction of heat stimulus","type":"exact"},{"name":"thermoception, sensory transduction of hot stimulus","type":"exact"}],"termid":"GO:0120168"}


id: GO:0070037
data:
  {"annotated_genes":["SJAG_02024"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77358],"is_not":false,"summary":null,"term":"GO:0070037"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to a pseudouridine residue in an rRNA molecule.","definition_xrefs":["GOC:imk","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA methyltransferase activity","termid":"GO:0008649"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02024":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140098","GO:0016741","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"rRNA (pseudouridine) methyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-6790906"],"termid":"GO:0070037","terms_by_termid":{"GO:0070037":null}}


id: PR:P50526
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ssp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P50526"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ssp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC297.03","synonyms":[{"name":"Spom972h-ssp1","type":"exact"}],"termid":"PR:P50526"}


id: GO:0046463
data:
  {"annotated_genes":["SJAG_03609","SJAG_02763","SJAG_03162","SJAG_04041"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73116,76307,91848,78802],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019432"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of acylglycerol, any mono-, di- or triester of glycerol with (one or more) fatty acids.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylglycerol metabolic process","termid":"GO:0006639"},{"relation_name":"is_a","term_name":"glycerolipid biosynthetic process","termid":"GO:0045017"},{"relation_name":"is_a","term_name":"neutral lipid biosynthetic process","termid":"GO:0046460"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02763":null,"SJAG_03162":null,"SJAG_03609":null,"SJAG_04041":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"acylglycerol biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"acylglycerol anabolism","type":"exact"},{"name":"acylglycerol biosynthesis","type":"exact"},{"name":"acylglycerol formation","type":"exact"},{"name":"acylglycerol synthesis","type":"exact"}],"termid":"GO:0046463","terms_by_termid":{"GO:0019432":null}}


id: MONDO:0021528
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-metastasizing neoplasm that arises from the breast parenchyma in males.","definition_xrefs":["NCIT:C4620"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast benign neoplasm","termid":"MONDO:0000620"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of male breast","secondary_identifiers":["UMLS:C0347482","SCTID:92206006","MEDGEN:83867"],"synonyms":[{"name":"benign Male breast neoplasm","type":"exact"},{"name":"benign Male breast tumor","type":"exact"},{"name":"benign Male breast tumour","type":"exact"},{"name":"benign neoplasm of the Male breast","type":"exact"},{"name":"benign tumor of Male breast","type":"exact"},{"name":"benign tumor of the Male breast","type":"exact"},{"name":"benign tumour of Male breast","type":"exact"},{"name":"benign tumour of the Male breast","type":"exact"},{"name":"male breast benign neoplasm","type":"exact"}],"termid":"MONDO:0021528","xrefs":{"Monarch":{"xref_id":"0021528"}}}


id: GO:1900320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of methane biosynthetic process from dimethylamine.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amine metabolic process","termid":"GO:0033240"},{"relation_name":"is_a","term_name":"regulation of methane biosynthetic process from dimethylamine","termid":"GO:1900318"},{"relation_name":"is_a","term_name":"positive regulation of alkane biosynthetic process","termid":"GO:1901579"},{"relation_name":"is_a","term_name":"positive regulation of cellular respiration","termid":"GO:1901857"},{"relation_name":"positively_regulates","term_name":"methane biosynthetic process from dimethylamine","termid":"GO:2001129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"positive regulation of methane biosynthetic process from dimethylamine","synonyms":[{"name":"activation of methane biosynthetic process from dimethylamine","type":"narrow"},{"name":"up regulation of methane biosynthetic process from dimethylamine","type":"exact"},{"name":"up-regulation of methane biosynthetic process from dimethylamine","type":"exact"},{"name":"upregulation of methane biosynthetic process from dimethylamine","type":"exact"}],"termid":"GO:1900320"}


id: PBO:0026693
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_caesium","termid":"PBO:0026693"}


id: PBO:0054162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1531","termid":"PBO:0054162"}


id: FYECO:0000347
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which vanoxerine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ vanoxerine","termid":"FYECO:0000347"}


id: MONDO:0000217
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Frontometaphyseal dysplasia (obsolete MONDO:0000217)","termid":"MONDO:0000217","xrefs":{"Monarch":{"xref_id":"0000217"}}}


id: PBO:0047280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FANCD2 pseudogene 2","termid":"PBO:0047280"}


id: MONDO:0010386
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any immunodeficiency disease in which the cause of the disease is a mutation in the IKBKG gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"X-linked Mendelian susceptibility to mycobacterial diseases","termid":"MONDO:0017905"},{"relation_name":"is_a","term_name":"inborn error of immunity","termid":"MONDO:0003778"},{"relation_name":"is_a","term_name":"IKBKG-related immunodeficiency with or without ectodermal dysplasia","termid":"MONDO:0100162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 33","secondary_identifiers":["Orphanet:319612","OMIM:300636","MESH:C567070","MEDGEN:370376","OMIM:300584","GARD:12915","UMLS:C1970879","MESH:C536289","DOID:0112003"],"synonyms":[{"name":"IKBKG X-linked mendelian susceptibility to mycobacterial diseases","type":"exact"},{"name":"IKBKG invasive pneumococcal disease, recurrent isolated","type":"exact"},{"name":"IMD33","type":"exact"},{"name":"IPD2","type":"exact"},{"name":"NEMO deficiency syndrome","type":"related"},{"name":"NF-kappa B essential modulator deficiency","type":"related"},{"name":"X-linked MSMD due to IKBKG deficiency","type":"exact"},{"name":"X-linked MSMD due to NEMO deficiency","type":"exact"},{"name":"X-linked mendelian susceptibility to mycobacterial diseases caused by mutation in IKBKG","type":"exact"},{"name":"X-linked mendelian susceptibility to mycobacterial diseases due to IKBKG deficiency","type":"exact"},{"name":"X-linked mendelian susceptibility to mycobacterial diseases due to NEMO deficiency","type":"exact"},{"name":"atypical Mycobacteriosis, familial, X-linked 1","type":"related"},{"name":"familial X-linked 1 atypical mycobacteriosis","type":"related"},{"name":"immunodeficiency 33, Mycobacteriosis, X-linked","type":"exact"},{"name":"immunodeficiency 33, X-linked recessive","type":"exact"},{"name":"immunodeficiency type 33","type":"exact"},{"name":"immunodeficiency without anhidrotic ectodermal dysplasia","type":"exact"},{"name":"immunodeficiency, isolated","type":"exact"},{"name":"immunodeficiency, pure","type":"exact"},{"name":"invasive pneumococcal disease, recurrent isolated caused by mutation in IKBKG","type":"exact"},{"name":"invasive pneumococcal disease, recurrent isolated, 2","type":"exact"},{"name":"invasive pneumococcal disease, recurrent isolated, type 2","type":"exact"}],"termid":"MONDO:0010386","xrefs":{"Monarch":{"xref_id":"0010386"}}}


id: MONDO:0800498
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A genetic generalized epilepsy that has an onset during childhood.","direct_ancestors":[{"relation_name":"is_a","term_name":"childhood-onset epilepsy syndrome","termid":"MONDO:0020072"},{"relation_name":"is_a","term_name":"genetic generalized epilepsy","termid":"MONDO:0100575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"childhood-onset genetic generalized epilepsy syndrome","termid":"MONDO:0800498","xrefs":{"Monarch":{"xref_id":"0800498"}}}


id: PBO:0043984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colony stimulating factor 1 receptor","termid":"PBO:0043984"}


id: PBO:0063965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pirin","termid":"PBO:0063965"}


id: MONDO:0014549
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any lethal congenital contracture syndrome in which the cause of the disease is a mutation in the ZBTB42 gene.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lethal congenital contracture syndrome","termid":"MONDO:0017436"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lethal congenital contracture syndrome 6","secondary_identifiers":["UMLS:C4015686","MEDGEN:864123","OMIM:616248"],"synonyms":[{"name":"LCCS6","type":"related"},{"name":"ZBTB42 lethal congenital contracture syndrome","type":"exact"},{"name":"lethal congenital contracture syndrome 6","type":"exact"},{"name":"lethal congenital contracture syndrome caused by mutation in ZBTB42","type":"exact"},{"name":"lethal congenital contracture syndrome type 6","type":"exact"}],"termid":"MONDO:0014549","xrefs":{"Monarch":{"xref_id":"0014549"}}}


id: GO:0000760
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"In organisms that undergo conjugation without cellular fusion, the process resulting in desensitization following exposure to pheromone stimulus that act to down-regulate further stimulation or block initial conjugation responses.","definition_xrefs":["GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to pheromone regulating conjugation with mutual genetic exchange","termid":"GO:0000756"},{"relation_name":"is_a","term_name":"negative adaptation of signaling pathway","termid":"GO:0022401"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"adaptation to pheromone regulating conjugation with mutual genetic exchange","synonyms":[{"name":"adaptation to pheromone involved conjugation without cellular fusion","type":"related"},{"name":"desensitization to pheromone during conjugation without cellular fusion","type":"exact"}],"termid":"GO:0000760"}


id: GO:0080017
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = alpha-humulene + diphosphate.","definition_xrefs":["PMID:12566586","PMID:9442047","RHEA:31895"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"},{"relation_name":"is_a","term_name":"sesquiterpene synthase activity","termid":"GO:0010334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0009975"}],"interesting_parent_ids":["GO:0003824","GO:0009975","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"alpha-humulene synthase activity","secondary_identifiers":["MetaCyc:RXN-8415","EC:4.2.3.104"],"termid":"GO:0080017"}


id: GO:0009987
data:
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