# terms

id: PBO:0090199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase, involved in cytoplasmic translational initiation","termid":"PBO:0090199"}


id: GO:0006014
data:
  {"annotated_genes":["SJAG_00070","SJAG_03174"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76272],"is_not":false,"summary":null,"term":"GO:0006014"},{"annotations":[59004],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019303"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving D-ribose (ribo-pentose). As beta-D-ribofuranose, D-ribose forms the glycose group of all ribonucleosides, ribonucleotides and ribonucleic acids, and also of ribose phosphates, various glycosides, some coenzymes and some forms of vitamin B12.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentose metabolic process","termid":"GO:0019321"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00070":null,"SJAG_03174":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"D-ribose metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null},"synonyms":[{"name":"D-ribose metabolism","type":"exact"}],"termid":"GO:0006014","terms_by_termid":{"GO:0006014":null,"GO:0019303":null}}


id: GO:0048811
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the analia of the male are generated and organized. The analia is the posterior-most vertral appendage that develops from the genital disc.","definition_xrefs":["PMID:11494318","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"analia morphogenesis","termid":"GO:0048809"},{"relation_name":"part_of","term_name":"male analia development","termid":"GO:0045496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male analia morphogenesis","termid":"GO:0048811"}


id: PBO:0001126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxyacylglutathione hydrolase (predicted)","termid":"PBO:0001126"}


id: MONDO:1010446
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dilated cardiomyopathy that occurs in sea otter.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dilated cardiomyopathy, non-human animal","termid":"MONDO:1010011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dilated cardiomyopathy, sea otter","secondary_identifiers":["OMIA:000162-34882"],"termid":"MONDO:1010446","xrefs":{"Monarch":{"xref_id":"1010446"}}}


id: PBO:0066394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"receptor accessory protein 4","termid":"PBO:0066394"}


id: FYPO:0001117
data:
  {"alleles_by_uniquename":{"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121093],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004205"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell is lower than normal. Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level","termid":"FYPO:0000826"},{"relation_name":"is_a","term_name":"altered RNA level during vegetative growth","termid":"FYPO:0001326"},{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03689":null},"genotype_count":1,"genotypes_by_uniquename":{"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"decreased RNA level during vegetative growth","references_by_uniquename":{"PMID:35226668":null},"secondary_identifiers":["FYPO:0002935"],"single_locus_annotated_genes":["SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta"],"synonyms":[{"name":"decreased RNA accumulation during vegetative growth","type":"related"},{"name":"decreased RNA level during mitotic cell cycle","type":"related"},{"name":"decreased cellular RNA level during vegetative growth","type":"exact"},{"name":"decreased cellular mRNA level during vegetative growth","type":"narrow"},{"name":"decreased mRNA accumulation during vegetative growth","type":"related"},{"name":"decreased mRNA level during mitotic cell cycle","type":"related"},{"name":"decreased mRNA level during vegetative growth","type":"narrow"},{"name":"decreased mRNA transcript level during vegetative growth","type":"narrow"},{"name":"decreased messenger RNA level during vegetative growth","type":"narrow"},{"name":"decreased transcript level during vegetative growth","type":"exact"},{"name":"reduced RNA level during vegetative growth","type":"exact"},{"name":"reduced mRNA level during vegetative growth","type":"narrow"}],"termid":"FYPO:0001117","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0004205":null,"FYPO_EXT:0000001":null}}


id: PBO:0081967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger RANBP2-type containing 1","termid":"PBO:0081967"}


id: PBO:0047549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 7 pseudogene 8","termid":"PBO:0047549"}


id: PBO:0049048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 39","termid":"PBO:0049048"}


id: GO:0006244
data:
  {"annotated_genes":["SJAG_03676","SJAG_04487"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[81238],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046081"},{"annotations":[78196],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006256"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a pyrimidine nucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a deoxyribose or ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleotide metabolic process","termid":"GO:0006220"},{"relation_name":"is_a","term_name":"nucleotide catabolic process","termid":"GO:0009166"},{"relation_name":"is_a","term_name":"pyrimidine-containing compound catabolic process","termid":"GO:0072529"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03676":null,"SJAG_04487":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"pyrimidine nucleotide catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"pyrimidine nucleotide breakdown","type":"exact"},{"name":"pyrimidine nucleotide catabolism","type":"exact"},{"name":"pyrimidine nucleotide degradation","type":"exact"}],"termid":"GO:0006244","terms_by_termid":{"GO:0006256":null,"GO:0046081":null}}


id: MONDO:0006195
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign nodular lesion protruding above the surface of the endometrium. It is composed of a fibrous stroma that contains thick-walled blood vessels and dilated endometrial glands. Polypectomy is the treatment of choice. Only few cases with recurrence have been reported.","definition_xrefs":["NCIT:C6433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endometrial disorder","termid":"MONDO:0000931"},{"relation_name":"is_a","term_name":"uterine polyp","termid":"MONDO:0004701"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endometrial polyp","secondary_identifiers":["MEDGEN:312370","UMLS:C1704273","EFO:1000237"],"synonyms":[{"name":"endometrial polyp","type":"exact"},{"name":"endometrial stromal polyp","type":"exact"},{"name":"endometrium polyp","type":"exact"},{"name":"polyp of endometrium","type":"exact"},{"name":"polyp of the endometrium","type":"exact"},{"name":"polyp, endometrial stromal, benign","type":"exact"}],"termid":"MONDO:0006195","xrefs":{"Monarch":{"xref_id":"0006195"}}}


id: PBO:0031874
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deletion Bleomycin Sensitive","termid":"PBO:0031874"}


id: MONDO:0957224
data:
  {"annotated_genes":["SJAG_03794"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88318],"is_not":false,"summary":null,"term":"MONDO:0957224"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03794":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"congenital myopathy 21 with early respiratory failure","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0081353","MEDGEN:1841060","OMIM:620326","UMLS:C5830424"],"termid":"MONDO:0957224","terms_by_termid":{"MONDO:0957224":null},"xrefs":{"Monarch":{"xref_id":"0957224"}}}


id: MONDO:0032925
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"respiratory papillomatosis, juvenile recurrent, congenital","secondary_identifiers":["MEDGEN:1719353","OMIM:618803","UMLS:C5394112"],"synonyms":[{"name":"JRRP","type":"related"},{"name":"RESPIRATORY PAPILLOMATOSIS, JUVENILE RECURRENT, CONGENITAL","type":"related"}],"termid":"MONDO:0032925","xrefs":{"Monarch":{"xref_id":"0032925"}}}


id: GO:0042651
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The pigmented membrane of any thylakoid.","definition_xrefs":["GOC:pr","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photosynthetic membrane","termid":"GO:0034357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"thylakoid membrane","termid":"GO:0042651"}


id: FYPO:0001505
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylserine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased phospholipid level","termid":"FYPO:0001288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular phosphatidylserine level","synonyms":[{"name":"increased cellular PS level","type":"exact"},{"name":"increased cellular phosphatidyl-L-serine level","type":"exact"},{"name":"increased cellular phosphatidylserine level during mitotic cell cycle","type":"related"},{"name":"increased cellular phosphatidylserine level during vegetative growth","type":"exact"},{"name":"increased phosphatidylserine accumulation","type":"related"}],"termid":"FYPO:0001505"}


id: PR:Q92360
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC6G9.15c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q92360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C6G9.15c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G9.15c","synonyms":[{"name":"Spom972h-SPAC6G9.15c","type":"exact"}],"termid":"PR:Q92360"}


id: PBO:0086198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that associates with mitochondrial ribosome; green fluorescent protein (GFP)-fusion protein localizes to mitochondria; YNL211C is not an essential gene","termid":"PBO:0086198"}


id: GO:0000339
data:
  {"annotated_genes":["SJAG_00507","SJAG_01830","SJAG_01064","SJAG_03223","SJAG_01625","SJAG_04360","SJAG_05010"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72178],"is_not":false,"summary":null,"term":"GO:0000339"},{"annotations":[93374],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098808"},{"annotations":[76545,101593,75957,66658,81363],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000340"}]},"cv_name":"molecular_function","definition":"Binding to a 7-methylguanosine (m7G) group or derivative located at the 5' end of an RNA molecule.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00507":null,"SJAG_01064":null,"SJAG_01625":null,"SJAG_01830":null,"SJAG_03223":null,"SJAG_04360":null,"SJAG_05010":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003723"],"is_obsolete":false,"name":"RNA cap binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"binding to mRNA cap","type":"narrow"},{"name":"mRNA cap binding","type":"narrow"},{"name":"snRNA cap binding","type":"narrow"}],"termid":"GO:0000339","terms_by_termid":{"GO:0000339":null,"GO:0000340":null,"GO:0098808":null}}


id: MONDO:0034923
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete inflammatory/autoimmune disorder involving the lacrimal system (obsolete MONDO:0034923)","secondary_identifiers":["Orphanet:519264"],"termid":"MONDO:0034923","xrefs":{"Monarch":{"xref_id":"0034923"}}}


id: PBO:0089091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-CCHC type zinc finger protein, human ZCCHC9 ortholog, implicated in mRNA splicing","termid":"PBO:0089091"}


id: MONDO:0017586
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Onychocytic matricoma is a rare tumor of the nail that is generally benign. Affected people often experience thickening of the involved portion of the nail. The tumor may be pigmented (melanonychia - a black or brown pigmentation of the normal nail plate) or non-pigmented. The exact underlying cause of onychocytic matricoma is currently unknown. It generally occurs sporadically in people with no family history of the condition. Treatment generally consists of surgical excision.","direct_ancestors":[{"relation_name":"is_a","term_name":"nail tumor","termid":"MONDO:0017588"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"onychocytic matricoma","secondary_identifiers":["GARD:11007","MEDGEN:1662490","Orphanet:300504","UMLS:C4751108"],"synonyms":[{"name":"acanthoma of the nail matrix","type":"exact"}],"termid":"MONDO:0017586","xrefs":{"Monarch":{"xref_id":"0017586"}}}


id: GO:0048348
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a paraxial mesoderm cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesodermal cell fate specification","termid":"GO:0007501"},{"relation_name":"part_of","term_name":"paraxial mesodermal cell fate commitment","termid":"GO:0048343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"paraxial mesodermal cell fate specification","termid":"GO:0048348"}


id: GO:0150053
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A synapse of a climbing fiber onto the dendrites of a Purkinje cell in cerebellum. The climbing fiber originates from the inferior olivary nucleus of the medulla oblongata.","definition_xrefs":["GOC:aruk","PMID:19597563","PMID:5044254","GOC:bc","PMID:23811844"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asymmetric, glutamatergic, excitatory synapse","termid":"GO:0098985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cerebellar climbing fiber to Purkinje cell synapse","synonyms":[{"name":"cerebellar climbing fibre to Purkinje cell synapse","type":"exact"}],"termid":"GO:0150053"}


id: FYPO:0002742
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more iron transport RNAs measured in a cell is higher than normal (i.e. higher than observed in wild-type cells). Iron transport RNAs are transcribed from genes whose products are involved in iron transport.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of transport gene mRNA during vegetative growth","termid":"FYPO:0004490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"increased level of iron transport gene mRNA during vegetative growth","synonyms":[{"name":"increased iron transport gene mRNA accumulation during vegetative growth","type":"related"},{"name":"increased level of iron transport gene RNA during vegetative growth","type":"exact"},{"name":"increased level of iron transport gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of iron transport gene transcripts during vegetative growth","type":"exact"}],"termid":"FYPO:0002742"}


id: GO:0031445
data:
  {"annotated_genes":["SJAG_02990","SJAG_01867","SJAG_02592","SJAG_04369","SJAG_01599","SJAG_00142","SJAG_03664","SJAG_02622","SJAG_02342","SJAG_03255","SJAG_01511","SJAG_02381","SJAG_02723","SJAG_03624"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92624,100381],"is_not":false,"summary":null,"term":"GO:0031445"},{"annotations":[79086,108487],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061188"},{"annotations":[110330],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060906"},{"annotations":[100779],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031453"},{"annotations":[92998],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090053"},{"annotations":[112193,92999,96186],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090055"},{"annotations":[98999,102123],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090052"},{"annotations":[119618],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010964"},{"annotations":[93683,119619,119988,99000,102124],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902801"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, extent or location of heterochromatin formation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gene expression","termid":"GO:0010468"},{"relation_name":"is_a","term_name":"regulation of chromatin organization","termid":"GO:1902275"},{"relation_name":"regulates","term_name":"heterochromatin formation","termid":"GO:0031507"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00142":null,"SJAG_01511":null,"SJAG_01599":null,"SJAG_01867":null,"SJAG_02342":null,"SJAG_02381":null,"SJAG_02592":null,"SJAG_02622":null,"SJAG_02723":null,"SJAG_02990":null,"SJAG_03255":null,"SJAG_03624":null,"SJAG_03664":null,"SJAG_04369":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006325"],"is_obsolete":false,"name":"regulation of heterochromatin formation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of heterochromatin assembly","type":"exact"}],"termid":"GO:0031445","terms_by_termid":{"GO:0010964":null,"GO:0031445":null,"GO:0031453":null,"GO:0060906":null,"GO:0061188":null,"GO:0090052":null,"GO:0090053":null,"GO:0090055":null,"GO:1902801":null}}


id: GO:1901936
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of beta-caryophyllene.","definition_xrefs":["GOC:TermGenie","PMID:22867794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpene catabolic process","termid":"GO:0051763"},{"relation_name":"is_a","term_name":"beta-caryophyllene metabolic process","termid":"GO:1901935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"beta-caryophyllene catabolic process","synonyms":[{"name":"beta-caryophyllene breakdown","type":"exact"},{"name":"beta-caryophyllene catabolism","type":"exact"},{"name":"beta-caryophyllene degradation","type":"exact"}],"termid":"GO:1901936"}


id: FYECO:0000187
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Pantothenate was completely excluded from the experimental medium/buffer.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping absent","termid":"FYECO:0000120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pantothenate absent","termid":"FYECO:0000187"}


id: PBO:0083427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF YBR063C","termid":"PBO:0083427"}


id: PBO:0070552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 18","termid":"PBO:0070552"}


id: PBO:0000279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA pseudouridylate synthase (predicted)","termid":"PBO:0000279"}


id: MONDO:0021460
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the saliva-secreting gland.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign neoplasm","termid":"MONDO:0005165"},{"relation_name":"is_a","term_name":"tumor of salivary gland","termid":"MONDO:0021357"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of salivary gland","secondary_identifiers":["SCTID:255154009","UMLS:C0347206","MEDGEN:83857","NCIT:C4600"],"synonyms":[{"name":"benign neoplasm of the salivary gland","type":"exact"},{"name":"benign salivary gland neoplasm","type":"exact"},{"name":"benign salivary gland tumor","type":"exact"},{"name":"benign salivary gland tumour","type":"exact"},{"name":"benign tumor of salivary gland","type":"exact"},{"name":"benign tumor of the salivary gland","type":"exact"},{"name":"benign tumour of salivary gland","type":"exact"},{"name":"benign tumour of the salivary gland","type":"exact"},{"name":"saliva-secreting gland benign neoplasm","type":"exact"},{"name":"salivary gland neoplasm, benign","type":"exact"}],"termid":"MONDO:0021460","xrefs":{"Monarch":{"xref_id":"0021460"}}}


id: GO:0045808
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of establishment of competence for transformation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment of competence for transformation","termid":"GO:0045304"},{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"negatively_regulates","term_name":"establishment of competence for transformation","termid":"GO:0030420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of establishment of competence for transformation","synonyms":[{"name":"down regulation of establishment of competence for transformation","type":"exact"},{"name":"down-regulation of establishment of competence for transformation","type":"exact"},{"name":"downregulation of establishment of competence for transformation","type":"exact"},{"name":"inhibition of establishment of competence for transformation","type":"narrow"},{"name":"inhibitor of the establishment of competence for transformation activity","type":"related"}],"termid":"GO:0045808"}


id: GO:0098703
data:
  {"annotated_genes":["SJAG_05229","SJAG_01090","SJAG_04551","SJAG_04668","SJAG_00296","SJAG_02877","SJAG_03631"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[68221,76193,94213,116298],"is_not":false,"summary":null,"term":"GO:0098703"},{"annotations":[93031,115220],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905949"},{"annotations":[103964],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905665"}]},"cv_name":"biological_process","definition":"The directed movement of calcium ions from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium ion import","termid":"GO:0070509"},{"relation_name":"is_a","term_name":"calcium ion transmembrane import into cytosol","termid":"GO:0097553"},{"relation_name":"is_a","term_name":"inorganic cation import across plasma membrane","termid":"GO:0098659"},{"relation_name":"is_a","term_name":"calcium ion import into cytosol","termid":"GO:1902656"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_01090":null,"SJAG_02877":null,"SJAG_03631":null,"SJAG_04551":null,"SJAG_04668":null,"SJAG_05229":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"calcium ion import across plasma membrane","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:1990035"],"synonyms":[{"name":"calcium ion import into cell","type":"exact"},{"name":"calcium ion uptake into cell","type":"exact"}],"termid":"GO:0098703","terms_by_termid":{"GO:0098703":null,"GO:1905665":null,"GO:1905949":null}}


id: PBO:0068560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 11, pseudogene","termid":"PBO:0068560"}


id: PBO:0120312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLURP2 antisense RNA 1","termid":"PBO:0120312"}


id: GO:0033090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of extrathymic T cell differentiation.","definition_xrefs":["GOC:mah","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of extrathymic T cell differentiation","termid":"GO:0033082"},{"relation_name":"is_a","term_name":"positive regulation of T cell differentiation","termid":"GO:0045582"},{"relation_name":"positively_regulates","term_name":"extrathymic T cell differentiation","termid":"GO:0033078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of extrathymic T cell differentiation","synonyms":[{"name":"positive regulation of extrathymic T cell development","type":"related"}],"termid":"GO:0033090"}


id: PBO:0045591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 2 (pseudogene)","termid":"PBO:0045591"}


id: GO:0043844
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ADP + D-fructose 6-phosphate = AMP + D-fructose 1,6-bisphosphate.","definition_xrefs":["EC:2.7.1.146"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016301","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"ADP-specific phosphofructokinase activity","secondary_identifiers":["RHEA:20105"],"synonyms":[{"name":"ADP-6-phosphofructokinase activity","type":"related"},{"name":"ADP-Pfk activity","type":"related"},{"name":"ADP-dependent phosphofructokinase activity","type":"related"},{"name":"ADP:D-fructose-6-phosphate 1-phosphotransferase activity","type":"related"}],"termid":"GO:0043844"}


id: PBO:0000079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific DUF999 family protein 2","termid":"PBO:0000079"}


id: GO:0075026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of symbiont appressorium initiation.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of appressorium initiation (obsolete GO:0075026)","synonyms":[{"name":"regulation of appressorium initiation on or near host","type":"related"},{"name":"regulation of initiation of appressorium on or near host","type":"exact"}],"termid":"GO:0075026"}


id: GO:0044044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance on the surface of the other (symbiont) organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["MITRE:tk"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via substance in symbiont surface (obsolete GO:0044044)","termid":"GO:0044044"}


id: GO:0008495
data:
  {"annotated_genes":["SJAG_03173"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80135],"is_not":false,"summary":null,"term":"GO:0008495"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: protoheme IX + (2E,6E)-farnesyl diphosphate + H2O = heme O + diphosphate.","definition_xrefs":["RHEA:28070"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyltransferase activity","termid":"GO:0004659"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03173":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016765","GO:0003674"],"is_obsolete":false,"name":"protoheme IX farnesyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:2.5.1.141","Reactome:R-HSA-2995330","MetaCyc:HEMEOSYN-RXN"],"synonyms":[{"name":"haem O synthase activity","type":"exact"},{"name":"heme A:farnesyltransferase activity","type":"exact"},{"name":"heme O synthase activity","type":"exact"},{"name":"protohaem IX farnesyltransferase activity","type":"exact"}],"termid":"GO:0008495","terms_by_termid":{"GO:0008495":null}}


id: GO:0097377
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the migration of an axon growth cone of a spinal cord interneuron is directed to a specific target site in response to a combination of attractive and repulsive cues. A spinal cord interneuron is a CNS interneuron located in the spinal cord.","definition_xrefs":["CL:0005000","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interneuron axon guidance","termid":"GO:0097376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spinal cord interneuron axon guidance","termid":"GO:0097377"}


id: PBO:0038667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA synthetase long chain family member 3","termid":"PBO:0038667"}


id: PBO:0040822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bridging integrator 2","termid":"PBO:0040822"}


id: PBO:0077135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOR signaling pathway regulator","termid":"PBO:0077135"}


id: PBO:0000642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpn6 (predicted)","termid":"PBO:0000642"}


id: PBO:0049314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase theta 2B","termid":"PBO:0049314"}


id: PBO:0030723
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_membrane_organization_during_nitrogen_starvation","termid":"PBO:0030723"}


id: PBO:0065423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSMB8 antisense RNA 1 (head to head)","termid":"PBO:0065423"}


id: PBO:0039218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase family 1 member D1","termid":"PBO:0039218"}


id: GO:1905402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of activated CD8-positive, alpha-beta T cell apoptotic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24187568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell apoptotic process","termid":"GO:0070232"},{"relation_name":"regulates","term_name":"activated CD8-positive, alpha-beta T cell apoptotic process","termid":"GO:1905397"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of activated CD8-positive, alpha-beta T cell apoptotic process","synonyms":[{"name":"regulation of activated CD8-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"regulation of activated CD8-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"regulation of activated CD8-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"regulation of activated CD8-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"regulation of activated CD8-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"regulation of activated CD8-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"regulation of activated CD8-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"}],"termid":"GO:1905402"}


id: PBO:0079276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription termination factor 2","termid":"PBO:0079276"}


id: FYECO:0000430
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in minimal medium where the medium contained trace amounts of glucose (<0.1%).","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MM with trace glucose","synonyms":[{"name":"minimal medium with trace glucose","type":"exact"},{"name":"very low glucose MM","type":"exact"}],"termid":"FYECO:0000430"}


id: GO:0051246
data:
  {"annotated_genes":["SJAG_00071","SJAG_01047","SJAG_01528","SJAG_03501","SJAG_01079","SJAG_01249","SJAG_04383","SJAG_00712","SJAG_04544","SJAG_05265","SJAG_04990","SJAG_05000","SJAG_02638","SJAG_02043","SJAG_02592","SJAG_00642","SJAG_00892","SJAG_03699","SJAG_01489","SJAG_01517","SJAG_04291","SJAG_04890","SJAG_01210","SJAG_00766","SJAG_04085","SJAG_02285","SJAG_03048","SJAG_03869","SJAG_02485","SJAG_01131","SJAG_02072","SJAG_04130","SJAG_00579","SJAG_04452","SJAG_04756","SJAG_03677","SJAG_02026","SJAG_01436","SJAG_00786","SJAG_04088","SJAG_00169","SJAG_00690","SJAG_00600","SJAG_01544","SJAG_02812","SJAG_16454","SJAG_02244","SJAG_00475","SJAG_02467","SJAG_00052","SJAG_03550","SJAG_00251","SJAG_00423","SJAG_04873","SJAG_04159","SJAG_01942","SJAG_04477","SJAG_02189","SJAG_02723","SJAG_01058"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104183],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905785"},{"annotations":[116713,97407,120099,101255],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000766"},{"annotations":[114010,93122],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904689"},{"annotations":[117480,71679,111520,96179,76982,101149],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990625"},{"annotations":[79281,79802],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904293"},{"annotations":[79064,108784],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032435"},{"annotations":[77097],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001125"},{"annotations":[90758],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905786"},{"annotations":[118996,108489,71520],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000767"},{"annotations":[114532,100520],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070131"},{"annotations":[102281],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070134"},{"annotations":[68858,69836,68352,62259,66698,70345],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901800"},{"annotations":[118938,104205,113568,110738,108492],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032436"},{"annotations":[101208],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904352"},{"annotations":[67841,70301],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045901"},{"annotations":[74472],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045948"},{"annotations":[70302,67842,78279],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045905"},{"annotations":[102537,92081,98041,97897,114251,118684,104401,102093,111556,113018,119320,107080],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000765"},{"annotations":[111336,112001,97281,115830],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140018"},{"annotations":[105151,105783,97042],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990611"},{"annotations":[116489],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032434"},{"annotations":[70720],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042176"},{"annotations":[104922],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990983"},{"annotations":[75762],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006449"},{"annotations":[101263],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0141014"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macromolecule metabolic process","termid":"GO:0060255"},{"relation_name":"is_a","term_name":"regulation of primary metabolic process","termid":"GO:0080090"},{"relation_name":"regulates","term_name":"protein metabolic 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of protein metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:0032268"],"synonyms":[{"name":"regulation of cellular protein metabolic process","type":"related"},{"name":"regulation of cellular protein metabolism","type":"related"},{"name":"regulation of protein metabolism","type":"exact"}],"termid":"GO:0051246","terms_by_termid":{"GO:0006449":null,"GO:0032434":null,"GO:0032435":null,"GO:0032436":null,"GO:0042176":null,"GO:0045901":null,"GO:0045905":null,"GO:0045948":null,"GO:0070131":null,"GO:0070134":null,"GO:0140018":null,"GO:0141014":null,"GO:1901800":null,"GO:1904293":null,"GO:1904352":null,"GO:1904689":null,"GO:1905785":null,"GO:1905786":null,"GO:1990611":null,"GO:1990625":null,"GO:1990983":null,"GO:2000765":null,"GO:2000766":null,"GO:2000767":null,"GO:2001125":null}}


id: GO:0045712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of salivary gland determination in a larval organism.","definition_xrefs":["GOC:tb","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of salivary gland boundary specification","termid":"GO:0045706"},{"relation_name":"is_a","term_name":"regulation of larval salivary gland boundary specification","termid":"GO:0045708"},{"relation_name":"positively_regulates","term_name":"larval salivary gland boundary specification","termid":"GO:0007433"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of larval salivary gland boundary specification","synonyms":[{"name":"activation of larval salivary gland determination","type":"narrow"},{"name":"positive regulation of larval salivary gland determination","type":"exact"},{"name":"stimulation of larval salivary gland determination","type":"narrow"},{"name":"up regulation of larval salivary gland determination","type":"exact"},{"name":"up-regulation of larval salivary gland determination","type":"exact"},{"name":"upregulation of larval salivary gland determination","type":"exact"}],"termid":"GO:0045712"}


id: MONDO:0020725
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Anemia due to a disorder that is persistent or long-standing in nature.","definition_xrefs":["NCIT:C35659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anemia","termid":"MONDO:0002280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"anemia due to chronic disorder","secondary_identifiers":["UMLS:C0002873","ICD9:285.29","MEDGEN:507442","SCTID:234347009"],"synonyms":[{"name":"Secondary anaemia","type":"related"},{"name":"Secondary anemia","type":"related"},{"name":"anaemia due to Chronic Disorder","type":"related"},{"name":"anaemia of chronic disease","type":"exact"},{"name":"anaemia of chronic disorder","type":"related"},{"name":"anaemia of chronic illness","type":"exact"},{"name":"anaemia of chronic inflammation","type":"exact"},{"name":"anaemia of systemic disease","type":"related"},{"name":"anemia due to Chronic Disorder","type":"related"},{"name":"anemia due to chronic disorder","type":"exact"},{"name":"anemia of chronic disease","type":"exact"},{"name":"anemia of chronic disorder","type":"related"},{"name":"anemia of chronic illness","type":"exact"},{"name":"anemia of chronic inflammation","type":"exact"},{"name":"anemia of systemic disease","type":"related"}],"termid":"MONDO:0020725","xrefs":{"Monarch":{"xref_id":"0020725"}}}


id: PATO:0001638
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A necessity quality inhering in a process by virtue of the bearer's being essential or indispensable.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"necessity of occurrent","termid":"PATO:0001637"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"necessary (occurrent)","termid":"PATO:0001638"}


id: MONDO:0023042
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"ectodermal dysplasia margarita type","secondary_identifiers":["GARD:2050"],"termid":"MONDO:0023042","xrefs":{"Monarch":{"xref_id":"0023042"}}}


id: PBO:0024813
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-causal_agent_in","termid":"PBO:0024813"}


id: PBO:0046552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group H member 6","termid":"PBO:0046552"}


id: PBO:0078453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor gamma variable 5P (pseudogene)","termid":"PBO:0078453"}


id: MONDO:0011311
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete glaucoma 1, open angle, F (obsolete MONDO:0011311)","secondary_identifiers":["OMIM:603383","MESH:C566383"],"synonyms":[{"name":"GLC1F","type":"related"},{"name":"glaucoma 1, open angle, F","type":"exact"},{"name":"glaucoma 1, open angle, type F","type":"exact"},{"name":"glaucoma, primary open angle, adult-onset","type":"related"}],"termid":"MONDO:0011311","xrefs":{"Monarch":{"xref_id":"0011311"}}}


id: PBO:0051820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron responsive element binding protein 2","termid":"PBO:0051820"}


id: FYPO:0004240
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 56 of histone H3 occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone acetylation during vegetative growth","termid":"FYPO:0000331"},{"relation_name":"is_a","term_name":"abnormal histone H3 acetylation during vegetative growth","termid":"FYPO:0002361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0002494","FYPO:0001985"],"is_obsolete":false,"name":"decreased histone H3-K56 acetylation during vegetative growth","synonyms":[{"name":"decreased histone H3-K56 acetylation during mitotic cell cycle","type":"related"},{"name":"decreased histone H3K56 acetylation during vegetative growth","type":"exact"},{"name":"reduced histone H3-K56 acetylation during vegetative growth","type":"exact"}],"termid":"FYPO:0004240"}


id: MONDO:0017184
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant hyperinsulinism due to SUR1 deficiency is a form of diazoxide-sensitive diffuse hyperinsulinism (DHI), characterized by hypoglycemic epiosodes that are usually mild, escaping detection during infancy and usually a good clinical response to diazoxide. Autosomal dominant hyperinsulinism due to SUR1 deficiency usually has a milder phenotype when compared to that resulting from recessive K-ATP mutations (recessive forms of Diazoxide-resistant hyperinsulinism).","definition_xrefs":["Orphanet:276575"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diazoxide-sensitive diffuse hyperinsulinism","termid":"MONDO:0015624"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"autosomal dominant hyperinsulinism due to SUR1 deficiency","secondary_identifiers":["SCTID:717046003","GARD:17283","UMLS:C4274080","MEDGEN:900764"],"synonyms":[{"name":"autosomal dominant hyperinsulinemic hypoglycemia due to SUR1 deficiency","type":"exact"}],"termid":"MONDO:0017184","xrefs":{"Monarch":{"xref_id":"0017184"}}}


id: GO:0031541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of anthocyanins.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of flavonoid biosynthetic process","termid":"GO:0009964"},{"relation_name":"is_a","term_name":"negative regulation of anthocyanin metabolic process","termid":"GO:0031538"},{"relation_name":"is_a","term_name":"regulation of anthocyanin biosynthetic process","termid":"GO:0031540"},{"relation_name":"negatively_regulates","term_name":"anthocyanin-containing compound biosynthetic process","termid":"GO:0009718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of anthocyanin biosynthetic process","synonyms":[{"name":"down regulation of anthocyanin biosynthetic process","type":"exact"},{"name":"down-regulation of anthocyanin biosynthetic process","type":"exact"},{"name":"downregulation of anthocyanin biosynthetic process","type":"exact"},{"name":"inhibition of anthocyanin biosynthetic process","type":"narrow"},{"name":"negative regulation of anthocyanin anabolism","type":"exact"},{"name":"negative regulation of anthocyanin biosynthesis","type":"exact"},{"name":"negative regulation of anthocyanin formation","type":"exact"},{"name":"negative regulation of anthocyanin synthesis","type":"exact"}],"termid":"GO:0031541"}


id: GO:0048538
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hematopoietic or lymphoid organ development","termid":"GO:0048534"},{"relation_name":"is_a","term_name":"gland development","termid":"GO:0048732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thymus development","termid":"GO:0048538"}


id: GO:1900441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of filamentous growth of a population of unicellular organisms in response to neutral pH.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of filamentous growth of a population of unicellular organisms in response to neutral pH","termid":"GO:1900440"},{"relation_name":"is_a","term_name":"negative regulation of filamentous growth of a population of unicellular organisms in response to pH","termid":"GO:1900742"},{"relation_name":"negatively_regulates","term_name":"filamentous growth of a population of unicellular organisms in response to neutral pH","termid":"GO:0036178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of filamentous growth of a population of unicellular organisms in response to neutral pH","synonyms":[{"name":"down regulation of filamentous growth of a population of unicellular organisms in response to neutral pH","type":"exact"},{"name":"down-regulation of filamentous growth of a population of unicellular organisms in response to neutral pH","type":"exact"},{"name":"downregulation of filamentous growth of a population of unicellular organisms in response to neutral pH","type":"exact"},{"name":"inhibition of filamentous growth of a population of unicellular organisms in response to neutral pH","type":"narrow"}],"termid":"GO:1900441"}


id: MONDO:0016382
data:
  {"annotated_genes":["SJAG_01798","SJAG_01338"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87403],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859355"},{"annotations":[88579],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011405"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"epidermal disease","termid":"MONDO:0019268"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01338":null,"SJAG_01798":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hereditary poikiloderma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1842934","GARD:20545","UMLS:C5680891","Orphanet:222628"],"termid":"MONDO:0016382","terms_by_termid":{"MONDO:0011405":null,"MONDO:0859355":null},"xrefs":{"Monarch":{"xref_id":"0016382"}}}


id: PBO:0060781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B9 pseudogene 3","termid":"PBO:0060781"}


id: PBO:0116779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 2 (gene/pseudogene)","termid":"PBO:0116779"}


id: PBO:0054487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1887","termid":"PBO:0054487"}


id: MONDO:0001969
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A type of defective gonadal development in patients with a wide spectrum of chromosomal mosaic variants. Their karyotypes are of partial sex chromosome monosomy resulting from an absence or an abnormal second sex chromosome (X or Y). Karyotypes include 45,X/46,xx; 45,X/46,xx/47,xxx; 46,xxp-; 45,X/46,xy; 45,X/47,xyy; 46,xypi; etc. The spectrum of phenotypes may range from phenotypic female to phenotypic male including variations in gonads and internal and external genitalia, depending on the ratio in each gonad of 45,X primordial germ cells to those with normal 46,xx or 46,xy constitution.","definition_xrefs":["MESH:D006060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Turner syndrome","termid":"MONDO:0019499"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"mixed gonadal dysgenesis","secondary_identifiers":["NANDO:2200388","MEDGEN:6654","DOID:14449","GARD:2539","SCTID:83579008","UMLS:C0018055"],"synonyms":[{"name":"gonadal dysgenesis mixed","type":"related"}],"termid":"MONDO:0001969","xrefs":{"Monarch":{"xref_id":"0001969"}}}


id: PBO:0084281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane protein of the ER; physically interacts with Kre6p; has a role in the synthesis of beta-1,6-glucan in the cell wall; required for cell viability","termid":"PBO:0084281"}


id: MONDO:0001559
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"prolapse of female genital organ","termid":"MONDO:0001592"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"perineocele","secondary_identifiers":["UMLS:C1456251","MEDGEN:1843478","ICD9:618.05","ICD10CM:N81.81","DOID:12637"],"termid":"MONDO:0001559","xrefs":{"Monarch":{"xref_id":"0001559"}}}


id: MONDO:0013603
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myopia","termid":"MONDO:0001384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"myopia 20, autosomal dominant","secondary_identifiers":["UMLS:C3279996","MEDGEN:481626","OMIM:614166"],"synonyms":[{"name":"MYP20","type":"exact"},{"name":"myopia 20, autosomal dominant","type":"exact"}],"termid":"MONDO:0013603","xrefs":{"Monarch":{"xref_id":"0013603"}}}


id: MONDO:0026765
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type II","termid":"MONDO:0005501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"congenital disorder of glycosylation, type IIr","secondary_identifiers":["MEDGEN:1717186","OMIM:301045","UMLS:C5393313"],"synonyms":[{"name":"CDG IIr","type":"related"},{"name":"CDG2R","type":"related"},{"name":"CONGENITAL DISORDER OF GLYCOSYLATION, TYPE IIr","type":"related"},{"name":"congenital disorder of glycosylation, type IIr, X-linked recessive","type":"exact"}],"termid":"MONDO:0026765","xrefs":{"Monarch":{"xref_id":"0026765"}}}


id: MONDO:1012752
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disproportionate growth of bones resulting in a shortened and compressed body, mainly due to reduced length of the spine and the long bones of the limbs and severe facial dysmorphisms that occurs in cattle due to a mutation in the COL2A1 gene.","definition_xrefs":["PMID:32894162"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrodysplasia, non-human animal","termid":"MONDO:1010306"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital bovine chondrodysplasia, COL2A1-related, cattle","secondary_identifiers":["OMIA:001926-9913"],"synonyms":[{"name":"achondrogenesis, type II in Bos taurus (taurine cattle)","type":"related"},{"name":"bulldog calf syndrome","type":"exact"}],"termid":"MONDO:1012752","xrefs":{"Monarch":{"xref_id":"1012752"}}}


id: PBO:0042924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chorionic gonadotropin subunit beta 2","termid":"PBO:0042924"}


id: PBO:0073437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor 3b subunit 6","termid":"PBO:0073437"}


id: PBO:0031487
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiotic_spindle","termid":"PBO:0031487"}


id: GO:0051340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of ligase activity, the catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of ligase activity (obsolete GO:0051340)","synonyms":[{"name":"ligase regulator","type":"exact"}],"termid":"GO:0051340"}


id: PBO:0084847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the large subunit; homologous to bacterial L16 ribosomal protein; synthetic lethality with hac1 mutation suggests a possible role in synthesis of precursors for protein glycosylation","termid":"PBO:0084847"}


id: GO:0004565
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal, non-reducing beta-D-galactose residues in beta-D-galactosides.","definition_xrefs":["EC:3.2.1.23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactosidase activity","termid":"GO:0015925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0016798","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"beta-galactosidase activity","secondary_identifiers":["Reactome:R-HSA-1630306","Reactome:R-HSA-1793217","Reactome:R-HSA-2265534","Reactome:R-HSA-9840795","Reactome:R-HSA-1606312","MetaCyc:3.2.1.23-RXN","Reactome:R-HSA-1605624","Reactome:R-HSA-2090079","Reactome:R-HSA-9036061"],"synonyms":[{"name":"beta-D-galactanase activity","type":"related"},{"name":"beta-D-galactoside galactohydrolase activity","type":"related"},{"name":"beta-D-lactosidase activity","type":"related"},{"name":"beta-lactosidase activity","type":"related"},{"name":"exo-(1->4)-beta-D-galactanase activity","type":"related"},{"name":"hydrolact","type":"related"}],"termid":"GO:0004565"}


id: FYPO:0000413
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which plasma membrane fusion involved in cytogamy does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell fusion during mating","termid":"FYPO:0000412"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000301","FYPO:0005447"],"is_obsolete":false,"name":"abolished cell fusion during mating","synonyms":[{"name":"abolished cell fusion during conjugation","type":"exact"},{"name":"abolished plasma membrane fusion involved in cytogamy","type":"exact"},{"name":"absent cell fusion during mating","type":"exact"},{"name":"cell fusion abolished during mating","type":"exact"},{"name":"cell fusion: absent","type":"related"}],"termid":"FYPO:0000413"}


id: FYPO:0005798
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell cortex of one or both cell tips is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to cell cortex during vegetative growth","termid":"FYPO:0000929"},{"relation_name":"is_a","term_name":"decreased protein localization to cell tip during vegetative growth","termid":"FYPO:0001586"},{"relation_name":"is_a","term_name":"abnormal protein localization to cell cortex of cell tip during vegetative growth","termid":"FYPO:0006875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to cell cortex of cell tip during vegetative growth","synonyms":[{"name":"decreased protein localisation to cell cortex of cell tip during vegetative growth","type":"exact"},{"name":"decreased protein localization to cell cortex of cell end during vegetative growth","type":"related"},{"name":"decreased protein localization to cell cortex of cell tip during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to cell tip cortex during vegetative growth","type":"exact"},{"name":"reduced protein localization to cell cortex of cell tip during vegetative growth","type":"exact"}],"termid":"FYPO:0005798"}


id: PBO:0080778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XK related 9","termid":"PBO:0080778"}


id: GO:0043804
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-formimidoylglycine => H2O + imidazol-4-one.","definition_xrefs":["RHEA:24935","PMID:27286964"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides","termid":"GO:0016812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016810","GO:0003824"],"is_obsolete":false,"name":"imidazolone hydrolase activity","termid":"GO:0043804"}


id: GO:0050268
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: coniferyl alcohol + NADP+ = coniferyl aldehyde + NADPH.","definition_xrefs":["RHEA:22444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"coniferyl-alcohol dehydrogenase activity","secondary_identifiers":["EC:1.1.1.194","MetaCyc:RXN-2602"],"synonyms":[{"name":"coniferyl-alcohol:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0050268"}


id: PR:P87151
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A THUMP domain-containing protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03633","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C25H2.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25H2.10c","secondary_identifiers":["UniProtKB:P87151"],"synonyms":[{"name":"Spom972h-THUMPD1","type":"exact"}],"termid":"PR:P87151"}


id: PR:O74509
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vsl1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar morphogenesis protein 7 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC594.06c","synonyms":[{"name":"Spom972h-vsl1","type":"exact"}],"termid":"PR:O74509"}


id: GO:0099738
data:
  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complete extent of cell cortex that underlies some some region of the plasma membrane.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cortex","termid":"GO:0005938"},{"relation_name":"is_a","term_name":"cytoplasmic region","termid":"GO:0099568"},{"relation_name":"part_of","term_name":"cell 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id: PBO:0055410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2840","termid":"PBO:0055410"}


id: PBO:0027553
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_chromatin_binding_at_replication_origin","termid":"PBO:0027553"}


id: PBO:0064745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 81","termid":"PBO:0064745"}


id: MONDO:0975827
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"orofaciodigital syndrome","termid":"MONDO:0015375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"orofaciodigital syndrome 21","secondary_identifiers":["OMIM:301132"],"termid":"MONDO:0975827","xrefs":{"Monarch":{"xref_id":"0975827"}}}


id: GO:0180025
data:
  {"annotated_genes":["SJAG_01169","SJAG_04524"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74653,114928],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034462"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a cytosolic small ribosomal subunit.","definition_xrefs":["PMID:30467428"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribosomal small subunit assembly","termid":"GO:0000028"},{"relation_name":"part_of","term_name":"cytosolic ribosome assembly","termid":"GO:0042256"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01169":null,"SJAG_04524":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003","GO:0042254"],"is_obsolete":false,"name":"cytosolic small ribosomal subunit assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0180025","terms_by_termid":{"GO:0034462":null}}


id: MONDO:0016665
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete unclassified vasculitis (obsolete MONDO:0016665)","secondary_identifiers":["Orphanet:251328"],"termid":"MONDO:0016665","xrefs":{"Monarch":{"xref_id":"0016665"}}}


id: PBO:0053207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galectin 7","termid":"PBO:0053207"}


id: GO:0103101
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + 7-methylthioheptylhydroximate = H+ + 6-methylthiohexyldesulfoglucosinolate + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete UDP-glucose:7-methylthioheptylhydroximate S-glucosyltransferase activity (obsolete GO:0103101)","termid":"GO:0103101"}


id: PBO:0089802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane vitamin H transmembrane transporter Vht1","termid":"PBO:0089802"}


id: MONDO:0006514
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Moderate to severe atopic dermatitis with allergic sensitisation.","definition_xrefs":["EFO:1000651"],"gene_count":0,"genotype_count":0,"name":"obsolete recalcitrant atopic dermatitis (obsolete MONDO:0006514)","secondary_identifiers":["PMID:25935106"],"termid":"MONDO:0006514","xrefs":{"Monarch":{"xref_id":"0006514"}}}


id: PBO:0065374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pregnancy specific beta-1-glycoprotein 2","termid":"PBO:0065374"}


id: PBO:0047870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(2)(q37.3)","termid":"PBO:0047870"}


id: GO:0052644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving chlorophyllide a, a chlorophyll lacking the terpenoid side chain, which is the functional parent of chlorophyll a.","definition_xrefs":["PMID:7724548"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"chlorophyllide metabolic process","termid":"GO:0052643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0033013","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"chlorophyllide a metabolic process","synonyms":[{"name":"chlorophyllide a metabolism","type":"exact"}],"termid":"GO:0052644"}


id: PATO:0002535
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having a short and stout cylindrical shape.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peg-like","termid":"PATO:0002535"}


id: PBO:0060934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear factor of activated T cells 3","termid":"PBO:0060934"}


id: PBO:0054430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1826","termid":"PBO:0054430"}


id: GO:1904919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-cystine from the lysosomal lumen across the lysosomal membrane and into the cytosol.","definition_xrefs":["GOC:kmv","GOC:TermGenie","PMID:22822152","GO_REF:0000078"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-cystine transport","termid":"GO:0015811"},{"relation_name":"is_a","term_name":"neutral amino acid transmembrane export from vacuole","termid":"GO:0034489"},{"relation_name":"is_a","term_name":"transmembrane transport from lysosomal lumen to cytosol","termid":"GO:0170063"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"L-cystine transmembrane transport from lysosomal lumen to cytosol","synonyms":[{"name":"transmembrane L-cystine transport from lysosomal lumen to cytosol","type":"exact"}],"termid":"GO:1904919"}


id: PR:Q9Y7R7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC306.07c gene.","definition_xrefs":["UniProtKB:Q9Y7R7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein C306.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC306.07c","synonyms":[{"name":"Spom972h-SPCC306.07c","type":"exact"},{"name":"U3 snoRNP-associated protein C306.07c (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y7R7"}


id: GO:0060970
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process in which the areas along the dorsal/ventral axis of the embryonic heart tube are established. This process will determine the patterns of cell differentiation along the axis.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dorsal/ventral pattern formation","termid":"GO:0009953"},{"relation_name":"part_of","term_name":"embryonic heart tube development","termid":"GO:0035050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic heart tube dorsal/ventral pattern formation","termid":"GO:0060970"}


id: PBO:0049807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase 1 pseudogene 2","termid":"PBO:0049807"}


id: PR:O13995
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dap1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 regulator dap1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25B8.01","synonyms":[{"name":"Spom972h-dap1","type":"exact"}],"termid":"PR:O13995"}


id: PBO:0045324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dedicator of cytokinesis 4","termid":"PBO:0045324"}


id: MONDO:1010618
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microcephaly that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microcephaly, non-human animal","termid":"MONDO:1010066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microcephaly, sheep","secondary_identifiers":["OMIA:000645-9940"],"termid":"MONDO:1010618","xrefs":{"Monarch":{"xref_id":"1010618"}}}


id: GO:1903048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of acetylcholine-gated cation channel activity.","definition_xrefs":["GOC:bf","GOC:TermGenie","GO_REF:0000059","PMID:21718690","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of excitatory postsynaptic potential","termid":"GO:0098815"},{"relation_name":"is_a","term_name":"regulation of postsynaptic neurotransmitter receptor activity","termid":"GO:0098962"},{"relation_name":"is_a","term_name":"regulation of cation channel activity","termid":"GO:2001257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of acetylcholine-gated cation channel activity","termid":"GO:1903048"}


id: GO:0010491
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-L-arabinose 1-phosphate + UTP = UDP-L-arabinose + diphosphate.","definition_xrefs":["PMID:17341835"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UTP-monosaccharide-1-phosphate uridylyltransferase activity","termid":"GO:0051748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016779","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"UTP:arabinose-1-phosphate uridylyltransferase activity","termid":"GO:0010491"}


id: RO:0002493
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x existence ends with y if and only if the time point at which x ends is equivalent to the time point at which y ends. Formally: x existence ends with y iff ω(x) = ω(y).","direct_ancestors":[{"relation_name":"is_a","term_name":"existence_ends_during","termid":"RO:0002492"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"existence_ends_with","termid":"RO:0002493"}


id: MONDO:0003508
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant germ cell tumor arising from the testis. It represents the rarest of the testicular germ cell tumors. Histologically it is characterized by the presence of syncytiotrophoblasts and cytotrophoblasts.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"testicular trophoblastic tumor","termid":"MONDO:0002871"},{"relation_name":"is_a","term_name":"testicular non-seminomatous germ cell cancer","termid":"MONDO:0003403"},{"relation_name":"is_a","term_name":"choriocarcinoma","termid":"MONDO:0005207"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"choriocarcinoma of testis","secondary_identifiers":["EFO:1000564","MEDGEN:65969","NCIT:C7733","icd11.foundation:1972827817","DOID:5551","UMLS:C0238449","ONCOTREE:TCCA"],"synonyms":[{"name":"choriocarcinoma","type":"related"},{"name":"choriocarcinoma of testis","type":"exact"},{"name":"choriocarcinoma of the testis","type":"exact"},{"name":"testicular choriocarcinoma","type":"exact"},{"name":"testis choriocarcinoma (disease)","type":"exact"}],"termid":"MONDO:0003508","xrefs":{"Monarch":{"xref_id":"0003508"}}}


id: PBO:0073254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 6","termid":"PBO:0073254"}


id: MONDO:0971031
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acquired metabolic disease that is characterized by the endogenous production of ethanol produced through endogenous fermentation by fungi or bacteria in the gastrointestinal system, oral cavity, or urinary system and typically presents with the signs of alcohol intoxication.","definition_xrefs":["DOID:0081455"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acquired metabolic disease","termid":"MONDO:0006504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"auto-brewery syndrome","secondary_identifiers":["MEDGEN:1853294","UMLS:C4552195"],"termid":"MONDO:0971031","xrefs":{"Monarch":{"xref_id":"0971031"}}}


id: PBO:0076129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUB1 regulator of transcription","termid":"PBO:0076129"}


id: GO:0097348
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a host cell endocytic vesicle.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell cytoplasmic vesicle membrane","termid":"GO:0044162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell endocytic vesicle membrane","termid":"GO:0097348"}


id: PBO:0080628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 75","termid":"PBO:0080628"}


id: PBO:0014280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERMES complex subunit Mdm12","termid":"PBO:0014280"}


id: MONDO:0024624
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A degenerative disorder that involves the lacrimal gland.","definition_xrefs":["MONDO:patterns/location"],"gene_count":0,"genotype_count":0,"name":"obsolete atrophy of lacrimal gland (obsolete MONDO:0024624)","secondary_identifiers":["SCTID:91951001"],"synonyms":[{"name":"atrophy of lacrimal gland","type":"exact"},{"name":"degenerative disorder of lacrimal gland","type":"exact"},{"name":"lacrimal atrophy","type":"related"},{"name":"lacrimal gland degenerative disorder","type":"exact"}],"termid":"MONDO:0024624","xrefs":{"Monarch":{"xref_id":"0024624"}}}


id: PBO:0040045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARPC1A pseudogene 1","termid":"PBO:0040045"}


id: PBO:0061406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuropeptide S receptor 1","termid":"PBO:0061406"}


id: GO:0102653
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: gibberellin A51 + 2-oxoglutarate + O2 = H+ + gibberellin A51-catabolite + succinate + carbon dioxide + H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete gibberellin A51,2-oxoglutarate:oxygen oxidoreductase activity (obsolete GO:0102653)","termid":"GO:0102653"}


id: GO:0140460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a Gram-negative bacterium.","definition_xrefs":["PMID:23664307"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to bacterium","termid":"GO:0009617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to Gram-negative bacterium","termid":"GO:0140460"}


id: MONDO:0012511
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A female reproductive system disease characterized by rupture of chorioamniotic membranes before 37 weeks of gestation.","definition_xrefs":["DOID:0111144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female reproductive system disorder","termid":"MONDO:0002263"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"preterm premature rupture of the membranes","secondary_identifiers":["NCIT:C92862","MEDGEN:147582","OMIM:610504","SCTID:312974005","MESH:C563032","UMLS:C0729264"],"synonyms":[{"name":"PPROM","type":"exact"},{"name":"preterm premature rupture of the membranes","type":"exact"},{"name":"preterm premature rupture of the membranes, susceptibility to","type":"exact"}],"termid":"MONDO:0012511","xrefs":{"Monarch":{"xref_id":"0012511"}}}


id: MONDO:0005498
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A serious bacterial infection caused by botulinum toxin which is produced by Clostridium botulinum. Patients are infected usually by ingestion of contaminated food or wound contamination. It leads to muscle paralysis which may result in respiratory failure.","definition_xrefs":["NCIT:C84599"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary bacterial infectious disease","termid":"MONDO:0000314"},{"relation_name":"is_a","term_name":"Clostridium infectious disease","termid":"MONDO:0024388"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"botulism","secondary_identifiers":["NORD:867","UMLS:C0006057","SCTID:398565003","DOID:11976","MedDRA:10006041","CSP:5000-0060","Orphanet:1267","MEDGEN:14204","EFO:0005542","GARD:943","icd11.foundation:78422942","MESH:D001906"],"synonyms":[{"name":"botulism","type":"exact"},{"name":"botulism poisoning","type":"exact"},{"name":"food poisoning due to Clostridium botulinum","type":"narrow"},{"name":"foodborne botulism","type":"narrow"},{"name":"foodborne botulism (subtype)","type":"related"},{"name":"infant botulism (subtype)","type":"related"},{"name":"infection due to Clostridium botulinum","type":"exact"},{"name":"intoxication with Clostridium botulinum toxin","type":"narrow"},{"name":"wound botulism (subtype)","type":"narrow"}],"termid":"MONDO:0005498","xrefs":{"Monarch":{"xref_id":"0005498"}}}


id: GO:0003242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenic growth in which the chambers of the heart expand in size, contributing to their shaping.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth involved in heart morphogenesis","termid":"GO:0003241"},{"relation_name":"part_of","term_name":"cardiac chamber morphogenesis","termid":"GO:0003206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac chamber ballooning","termid":"GO:0003242"}


id: MONDO:0035646
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myotonic dystrophy type 1","termid":"MONDO:0008056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0005267"],"is_obsolete":false,"name":"congenital-onset Steinert myotonic dystrophy","secondary_identifiers":["Orphanet:589821","MEDGEN:1842512","UMLS:C5680305","GARD:22361","ICD10CM:G71.1"],"synonyms":[{"name":"Congenital-onset Steinert disease","type":"exact"},{"name":"Congenital-onset myotonic dystrophy type 1","type":"exact"}],"termid":"MONDO:0035646","xrefs":{"Monarch":{"xref_id":"0035646"}}}


id: GO:0055020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of cardiac muscle fiber development.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell development","termid":"GO:0010720"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle fiber development","termid":"GO:0055018"},{"relation_name":"is_a","term_name":"positive regulation of cardiac muscle cell differentiation","termid":"GO:2000727"},{"relation_name":"positively_regulates","term_name":"cardiac muscle cell development","termid":"GO:0055013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac muscle fiber development","synonyms":[{"name":"activation of cardiac muscle fiber development","type":"narrow"},{"name":"positive regulation of cardiac muscle fibre development","type":"exact"},{"name":"positive regulation of heart muscle fiber development","type":"exact"},{"name":"stimulation of cardiac muscle fiber development","type":"narrow"},{"name":"up regulation of cardiac muscle fiber development","type":"exact"},{"name":"up-regulation of cardiac muscle fiber development","type":"exact"},{"name":"upregulation of cardiac muscle fiber development","type":"exact"}],"termid":"GO:0055020"}


id: PBO:0111953
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TfdA family","termid":"PBO:0111953"}


id: PBO:0065581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine kinase 2 beta","termid":"PBO:0065581"}


id: PBO:0083020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deleted ORF; does not encode a protein; included in the original annotation of Chromosome I but later withdrawn","termid":"PBO:0083020"}


id: PBO:0051887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITFG1 antisense RNA 1","termid":"PBO:0051887"}


id: PBO:0057031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 126","termid":"PBO:0057031"}


id: PBO:0055946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 55","termid":"PBO:0055946"}


id: GO:0052154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts the B-cell mediated immune response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host immune response","termid":"GO:0052553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host B-cell mediated immune response","secondary_identifiers":["GO:0052293"],"synonyms":[{"name":"modulation by organism of B-cell mediated immune response of other organism involved in symbiotic interaction","type":"broad"},{"name":"modulation by symbiont of host B-cell mediated immune response","type":"exact"},{"name":"perturbation of host B-cell mediated immune response","type":"exact"},{"name":"regulation by organism of host B-cell mediated immune response","type":"exact"},{"name":"symbiont-mediated perturbation of host humoral immune response","type":"exact"}],"termid":"GO:0052154"}


id: MONDO:0024886
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign adenofibroma characterized by the presence of serous secretory cells and minute cystic spaces filled with watery fluid. A representative example is the ovarian serous adenofibroma. Cases with epithelial atypia described in the ovary lacking stromal invasion are designated as borderline serous adenofibromas and have a low grade malignant potential.","definition_xrefs":["NCIT:C67090"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenofibroma","termid":"MONDO:0006071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serous adenofibroma","secondary_identifiers":["MEDGEN:87253","ICDO:9014/0","UMLS:C0334498"],"synonyms":[{"name":"serous adenofibroma","type":"exact"}],"termid":"MONDO:0024886","xrefs":{"Monarch":{"xref_id":"0024886"}}}


id: PBO:0012578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit beta 7 (predicted)","termid":"PBO:0012578"}


id: PBO:0064542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POM121 transmembrane nucleoporin like 3, pseudogene","termid":"PBO:0064542"}


id: PR:O13791
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- slt1 gene.","definition_xrefs":["UniProtKB:O13791","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein slt1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G6.13","synonyms":[{"name":"Spom972h-slt1","type":"exact"}],"termid":"PR:O13791"}


id: GO:0071134
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha9-beta1 integrin complex bound to thrombospondin-1.","definition_xrefs":["PMID:17413041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"alpha9-beta1 integrin-thrombospondin-1 complex","synonyms":[{"name":"ITGA9-ITGB1-THBS1 complex","type":"narrow"}],"termid":"GO:0071134"}


id: PBO:0068657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 38, pseudogene","termid":"PBO:0068657"}


id: PBO:0018264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"condensin complex SMC subunit Smc4","termid":"PBO:0018264"}


id: PBO:0040993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bolA family member 2 pseudogene 3","termid":"PBO:0040993"}


id: MONDO:0009216
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fanconi-Bickel glycogenosis (FBG) is a rare glycogen storage disease characterized by hepatorenal glycogen accumulation, severe renal tubular dysfunction and impaired glucose and galactose metabolism.","definition_xrefs":["Orphanet:2088"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"metabolic disease","termid":"MONDO:0005066"},{"relation_name":"excluded_subClassOf","term_name":"disorder of carbohydrate transmembrane transport and absorption","termid":"MONDO:0017706"},{"relation_name":"excluded_subClassOf","term_name":"glucose transport disorder","termid":"MONDO:0019226"},{"relation_name":"excluded_subClassOf","term_name":"obsolete nephropathy secondary to a storage or other metabolic disease (obsolete MONDO:0019743)","termid":"MONDO:0019743"},{"relation_name":"is_a","term_name":"disorder of glycogen metabolism","termid":"MONDO:0002412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"glycogen storage disease due to GLUT2 deficiency","secondary_identifiers":["icd11.foundation:426701963","UMLS:C3495427","OMIM:227810","DOID:0070562","GARD:2268","MEDGEN:501176","SCTID:61598006"],"synonyms":[{"name":"Bickel-Fanconi glycogenosis","type":"exact"},{"name":"FBS","type":"exact"},{"name":"Fanconi Bickel syndrome","type":"exact"},{"name":"Fanconi syndrome with intestinal malabsorption and galactose intolerance","type":"exact"},{"name":"Fanconi-Bickel disease","type":"exact"},{"name":"Fanconi-Bickel syndrome","type":"exact"},{"name":"GLUT2 deficiency","type":"related"},{"name":"GSD due to GLUT2 deficiency","type":"exact"},{"name":"GSD type 11","type":"related"},{"name":"GSD type XI","type":"related"},{"name":"glycogen storage disease 11","type":"related"},{"name":"glycogen storage disease XI","type":"related"},{"name":"glycogen storage disease due to GLUT2 deficiency","type":"exact"},{"name":"glycogen storage disease type 11","type":"related"},{"name":"glycogen storage disease type XI","type":"related"},{"name":"glycogenosis Fanconi EXACT","type":"related"},{"name":"glycogenosis due to GLUT2 deficiency","type":"exact"},{"name":"glycogenosis, Fanconi type","type":"related"},{"name":"hepatic glycogenosis with Fanconi nephropathy","type":"related"},{"name":"hepatic glycogenosis with amino aciduria and glucosuria","type":"related"},{"name":"hepatorenal glycogenosis with renal Fanconi syndrome","type":"related"},{"name":"hepatorenal glycogenosis with renal fanconi syndrome","type":"related"},{"name":"pseudo-phlorizin diabetes","type":"related"}],"termid":"MONDO:0009216","xrefs":{"Monarch":{"xref_id":"0009216"}}}


id: PR:Q9USR2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A U4/U6.U5 tri-snRNP-associated protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02581","PANTHER:PTHR24006:SF31","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA-splicing protein ubp10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC577.07","secondary_identifiers":["UniProtKB:Q9USR2"],"synonyms":[{"name":"Spom972h-USP39","type":"exact"},{"name":"inactive ubiquitin-specific-processing protease 10 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USR2"}


id: PBO:0077116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIMM23B-AGAP6 readthrough (NMD candidate)","termid":"PBO:0077116"}


id: PBO:0040856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bridge-like lipid transfer protein family member 2","termid":"PBO:0040856"}


id: FYPO:0004158
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which vegetative a cell is elongated, and contains more than four nuclei and pieces of a septum that does not completely bisect the cell.","definition_xrefs":["PMID:21931816","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated vegetative cell with more than four nuclei","termid":"FYPO:0008045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000032","FYPO:0001985","FYPO:0001320","FYPO:0000005","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"elongated vegetative cell with fragmented septum and more than four nuclei","synonyms":[{"name":"elongated cell with fragmented septum and more than four nuclei during mitotic cell cycle","type":"related"},{"name":"elongated cell with fragmented septum and more than four nuclei during vegetative growth","type":"exact"},{"name":"long vegetative cell with fragmented septum and more than four nuclei","type":"exact"}],"termid":"FYPO:0004158"}


id: PBO:0058009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3936","termid":"PBO:0058009"}


id: FYPO:0004176
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell during a cellular response to a pheromone that occurs when the cell is subject to nitrogen starvation is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PMID:8668157","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during nitrogen starvation","termid":"FYPO:0001152"},{"relation_name":"is_a","term_name":"decreased RNA level during cellular response to pheromone","termid":"FYPO:0003426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased RNA level during cellular response to pheromone and nitrogen starvation","synonyms":[{"name":"decreased RNA accumulation during cellular response to pheromone and nitrogen starvation","type":"related"},{"name":"decreased transcript level during cellular response to pheromone and nitrogen starvation","type":"exact"},{"name":"reduced RNA level during cellular response to pheromone and nitrogen starvation","type":"exact"}],"termid":"FYPO:0004176"}


id: MOD:01680
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces one residue alpha amino or imino hydrogen with one methyl group.","definition_xrefs":["OMSSA:11","OMSSA:76","Unimod:34#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monomethylated residue","termid":"MOD:00599"},{"relation_name":"is_a","term_name":"alpha-amino methylated residue","termid":"MOD:01460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"alpha-amino monomethylated residue","synonyms":[{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"},{"name":"N2Me1Res","type":"exact"},{"name":"ntermmethyl","type":"exact"},{"name":"ntermpepmethyl","type":"exact"}],"termid":"MOD:01680"}


id: PBO:0076952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transforming growth factor beta 2","termid":"PBO:0076952"}


id: PBO:0030031
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_adenylyl_cyclase_activity","termid":"PBO:0030031"}


id: PBO:0040367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase peripheral stalk-membrane subunit b pseudogene 4","termid":"PBO:0040367"}


id: PBO:0030310
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_in_germinating_spore","termid":"PBO:0030310"}


id: PBO:0045800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endothelin receptor type A","termid":"PBO:0045800"}


id: PBO:0062972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein cytoplasmic 4","termid":"PBO:0062972"}


id: PBO:0029198
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_threonine_phosphorylation","termid":"PBO:0029198"}


id: MONDO:0015123
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare lipid metabolism disorder.","gene_count":0,"genotype_count":0,"name":"obsolete rare inherited dyslipidemia (obsolete MONDO:0015123)","secondary_identifiers":["Orphanet:101953","ICD10CM:E78.5"],"synonyms":[{"name":"rare dyslipidemia","type":"related"},{"name":"rare lipid metabolism disorder","type":"exact"}],"termid":"MONDO:0015123","xrefs":{"Monarch":{"xref_id":"0015123"}}}


id: MONDO:0012220
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A Griscelli syndrome characterized by isolated silvery gray sheen of the hair and hypopigmentation of the skin that has material basis in mutation in the MLPH or MYO5A genes.","definition_xrefs":["PMID:12897212","DOID:0060834","PMID:12148598"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Griscelli syndrome","termid":"MONDO:0018306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"Griscelli syndrome type 3","secondary_identifiers":["GARD:9715","ICD10CM:E70.3","icd11.foundation:1959052636","UMLS:C1836573","MEDGEN:373124","Orphanet:79478","OMIM:609227","MESH:C537303"],"synonyms":[{"name":"GS3","type":"exact"},{"name":"Griscelli disease type 3","type":"related"},{"name":"Griscelli syndrome type 3","type":"exact"},{"name":"Griscelli syndrome, type 3","type":"related"},{"name":"Griscelli-PruniC)ras syndrome type 3","type":"exact"},{"name":"Griscelli-Pruniéras syndrome type 3","type":"exact"},{"name":"Griscelli-Pruni��ras syndrome type 3","type":"exact"},{"name":"hypomelanosis with no immunologic or neurologic manifestations","type":"related"}],"termid":"MONDO:0012220","xrefs":{"Monarch":{"xref_id":"0012220"}}}


id: GO:0033990
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(4)-acetyl-L-2,4-diaminobutyrate = ectoine + H2O.","definition_xrefs":["RHEA:17281","EC:4.2.1.108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"ectoine synthase activity","secondary_identifiers":["MetaCyc:R103-RXN","KEGG_REACTION:R06979"],"synonyms":[{"name":"4-N-acetyl-L-2,4-diaminobutanoate hydro-lyase (L-ectoine-forming) activity","type":"related"},{"name":"EctC","type":"related"},{"name":"L-ectoine synthase activity","type":"related"},{"name":"N-acetyldiaminobutanoate dehydratase activity","type":"related"},{"name":"N-acetyldiaminobutyrate dehydratase activity","type":"related"},{"name":"N4-acetyl-L-2,4-diaminobutanoate hydro-lyase (L-ectoine-forming) activity","type":"related"}],"termid":"GO:0033990"}


id: MONDO:0009309
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any chronic granulomatous disease in which the cause of the disease is a mutation in the NCF1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic granulomatous disease","termid":"MONDO:0018305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"granulomatous disease, chronic, autosomal recessive, cytochrome b-positive, type 1","secondary_identifiers":["MESH:C565532","DOID:0070192","NANDO:2201281","OMIM:233700","UMLS:C1856251","MEDGEN:341102","GARD:15176"],"synonyms":[{"name":"CDG1","type":"related"},{"name":"CGD, autosomal recessive cytochrome B-positive, type 1","type":"related"},{"name":"NCF1 chronic granulomatous disease","type":"exact"},{"name":"Ncf1, deficiency of","type":"related"},{"name":"Soc2, deficiency of","type":"related"},{"name":"chronic granulomatous disease 1, autosomal recessive","type":"exact"},{"name":"chronic granulomatous disease caused by mutation in NCF1","type":"exact"},{"name":"granulomatous disease, chronic, autosomal recessive, cytochrome b-POSITIVE, type I","type":"related"},{"name":"granulomatous disease, chronic, autosomal recessive, cytochrome b-positive, type 1","type":"exact"},{"name":"granulomatous disease, chronic, due to Ncf1 deficiency","type":"related"},{"name":"neutrophil cytosol Factor 1, deficiency of","type":"related"},{"name":"p47-PHOX, deficiency of","type":"related"},{"name":"soluble oxidase component II, deficiency of","type":"related"}],"termid":"MONDO:0009309","xrefs":{"Monarch":{"xref_id":"0009309"}}}


id: FYPO:0004695
data:
  {"alleles_by_uniquename":{"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121084],"is_not":false,"summary":null,"term":"FYPO:0004695"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more diglycerides measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00426":null},"genotype_count":1,"genotypes_by_uniquename":{"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"bbl1-P363S(aa)","display_uniquename":"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00426:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular diglyceride level","references_by_uniquename":{"PMID:25318672":null},"single_locus_annotated_genes":["SJAG_00426"],"single_locus_genotype_uniquenames":["bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"increased cellular DAG level","type":"exact"},{"name":"increased cellular diacylglycerol level","type":"exact"},{"name":"increased cellular diglyceride level during mitotic cell cycle","type":"related"},{"name":"increased cellular diglyceride level during vegetative growth","type":"exact"},{"name":"increased diglyceride accumulation","type":"related"}],"termid":"FYPO:0004695","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000006":null,"FYECO:0000162":null,"FYPO:0004695":null}}


id: GO:1904336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of ductus arteriosus closure.","definition_xrefs":["GOC:TermGenie","PMID:16303610","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ductus arteriosus closure","termid":"GO:1904335"},{"relation_name":"is_a","term_name":"negative regulation of artery morphogenesis","termid":"GO:1905652"},{"relation_name":"negatively_regulates","term_name":"ductus arteriosus closure","termid":"GO:0097070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of ductus arteriosus closure","synonyms":[{"name":"down regulation of ductus arteriosus closure","type":"exact"},{"name":"down-regulation of ductus arteriosus closure","type":"exact"},{"name":"downregulation of ductus arteriosus closure","type":"exact"},{"name":"inhibition of ductus arteriosus closure","type":"narrow"}],"termid":"GO:1904336"}


id: FYPO:0001303
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of myristoyl-CoA ligase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal long-chain fatty acid-CoA ligase activity","termid":"FYPO:0001305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000707","FYPO:0000661","FYPO:0000002","FYPO:0001985","FYPO:0000652","FYPO:0005447"],"is_obsolete":false,"name":"abnormal myristoyl-CoA ligase activity","synonyms":[{"name":"abnormal myristoyl-CoA synthetase activity","type":"exact"}],"termid":"FYPO:0001303"}


id: MONDO:0014364
data:
  {"annotated_genes":["SJAG_03099"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88213],"is_not":false,"summary":null,"term":"MONDO:0014364"}]},"cv_name":"mondo","definition":"Any mitochondrial complex III deficiency in which the cause of the disease is a mutation in the LYRM7 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex III deficiency, nuclear type","termid":"MONDO:0020811"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03099":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial complex III deficiency nuclear type 8","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:862877","GARD:16018","UMLS:C4014440","OMIM:615838","DOID:0080117"],"synonyms":[{"name":"LYRM7 mitochondrial complex III deficiency","type":"exact"},{"name":"MC3DN8","type":"related"},{"name":"mitochondrial Complex 3 deficiency, nuclear type 8","type":"related"},{"name":"mitochondrial complex III deficiency caused by mutation in LYRM7","type":"exact"},{"name":"mitochondrial complex III deficiency nuclear type 8","type":"exact"},{"name":"mitochondrial complex III deficiency, nuclear type 8","type":"related"}],"termid":"MONDO:0014364","terms_by_termid":{"MONDO:0014364":null},"xrefs":{"Monarch":{"xref_id":"0014364"}}}


id: PATO:0002488
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Overlap with quality inhering in a bearer by virtue of the bearer's being positioned over another entity so as to cover some portion of it.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"overlap with","termid":"PATO:0001590"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"overlapping","termid":"PATO:0002488"}


id: GO:0044828
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a host organism interferes with, inhibits or disrupts viral genome replication.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host-mediated perturbation of viral process","termid":"GO:0044788"},{"relation_name":"negatively_regulates","term_name":"viral genome replication","termid":"GO:0019079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"host-mediated suppression of viral genome replication","synonyms":[{"name":"negative regulation by host of viral genome replication","type":"exact"}],"termid":"GO:0044828"}


id: GO:0120335
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Radial spoke 3 (RS3), when present, is the most distal of each group of radial spokes, whether grouped as triplets or doublets. RS3 has significantly different morphology and protein composition than RS1 and RS2 and also extends at a slant from the microtubule doublet, rather than perpendicularly like RS1 and RS2. In some organisms (e.g. Chlamydomonas and Sarcophaga bullata), RS3 is represented only as a stump attached to the A-microtubule lacking the rest of the stalk structure and entirely lacking the head structure.","definition_xrefs":["GOC:krc","PMID:22754630","PMID:25694453","ISBN:0124325653","PMID:9450971"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radial spoke","termid":"GO:0001534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"radial spoke 3","synonyms":[{"name":"RS3","type":"related"}],"termid":"GO:0120335"}


id: PBO:0083051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Diacylglycerol acyltransferase; catalyzes the terminal step of triacylglycerol (TAG) formation, acylates diacylglycerol using acyl-CoA as an acyl donor; Lro1p and Dga1p can O-acylate ceramides; localized to lipid particles","termid":"PBO:0083051"}


id: GO:1903806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-isoleucine from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GO_REF:0000075","PMID:23895341","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"amino acid import across plasma membrane","termid":"GO:0089718"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"},{"relation_name":"is_a","term_name":"isoleucine transmembrane transport","termid":"GO:1903714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"L-isoleucine import across plasma membrane","secondary_identifiers":["GO:0090476","GO:0090477"],"synonyms":[{"name":"L-isoleucine import","type":"broad"},{"name":"L-isoleucine import into cell","type":"exact"},{"name":"isoleucine import","type":"broad"}],"termid":"GO:1903806"}


id: SO:0002324
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A frameshift_variant (SO:0001589) that allows the transcript to escape nonsense-mediated decay (NMD).","definition_xrefs":["GenCC:AR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"frameshift_variant","termid":"SO:0001589"},{"relation_name":"is_a","term_name":"NMD_escaping_variant","termid":"SO:0002320"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frameshift_variant_NMD_escaping","synonyms":[{"name":"frameshift variant-NMD escaping","type":"exact"},{"name":"frameshift variant-nonsense-mediated decay escaping","type":"exact"}],"termid":"SO:0002324"}


id: GO:0039627
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The protein coat that surrounds the infective nucleic acid in some virus particles where the subunits (capsomeres) are arranged to form an icosahedron with T=147 symmetry. T=147 icosahedral capsid is composed of 12 pentameric and 1460 hexameric capsomeres for a total of 8820 capsid proteins.","definition_xrefs":["GOC:plm","UniProtKB-KW:KW-0167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosahedral viral capsid","termid":"GO:0019030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"T=147 icosahedral capsid","termid":"GO:0039627"}


id: PBO:0029598
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_sodium:hydrogen_antiporter_activity","termid":"PBO:0029598"}


id: MONDO:0018071
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Trisomy 18 is a chromosomal abnormality associated with the presence of an extra chromosome 18 and characterized by growth delay, dolichocephaly, a characteristic facies, limb anomalies and visceral malformations.","definition_xrefs":["Orphanet:3380"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete eyebrow hypertrophy (obsolete MONDO:0020186)","termid":"MONDO:0020186"},{"relation_name":"excluded_subClassOf","term_name":"obsolete eyebrow/eyelashes distichiasis (obsolete MONDO:0020190)","termid":"MONDO:0020190"},{"relation_name":"excluded_subClassOf","term_name":"obsolete chromosomal anomaly with cataract (obsolete MONDO:0020226)","termid":"MONDO:0020226"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"trisomy","termid":"MONDO:0700065"},{"relation_name":"is_a","term_name":"chromosome 18 disorder","termid":"MONDO:0700125"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trisomy 18","secondary_identifiers":["MedDRA:10053884","UMLS:C4317091","ICD9:758.2","MESH:C580500","NORD:1797","SCTID:51500006","icd11.foundation:1505179968","DOID:1085","MEDGEN:1384417","NANDO:2200963","NCIT:C36626","GARD:6321"],"synonyms":[{"name":"18 trisomy","type":"related"},{"name":"E3 trisomy","type":"exact"},{"name":"Edwards syndrome","type":"exact"},{"name":"chromosome 18 duplication","type":"exact"},{"name":"chromosome 18 trisomy","type":"related"},{"name":"complete trisomy 18 syndrome","type":"exact"},{"name":"trisomy 16-18 (formerly)","type":"related"},{"name":"trisomy 18","type":"exact"},{"name":"trisomy E (formerly)","type":"related"},{"name":"trisomy type 18","type":"exact"}],"termid":"MONDO:0018071","xrefs":{"Monarch":{"xref_id":"0018071"}}}


id: GO:0038128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of a ligand to the tyrosine kinase receptor ERBB2 on the surface of a cell. The pathway ends with regulation of a downstream cellular process, e.g. transcription. ERBB2 receptors are themselves unable to bind to ligands, but act as a signal-amplifying tyrosine kinase within a heterodimeric pair.","definition_xrefs":["PMID:16460914","GOC:jc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ERBB signaling pathway","termid":"GO:0038127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"ERBB2 signaling pathway","secondary_identifiers":["Reactome:R-HSA-1227986"],"synonyms":[{"name":"ERBB2 signalling pathway","type":"exact"},{"name":"HER2 signaling pathway","type":"exact"},{"name":"NEU signaling","type":"exact"},{"name":"receptor tyrosine-protein kinase erbB-2 signaling pathway","type":"exact"}],"termid":"GO:0038128"}


id: MONDO:0010348
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"excluded_subClassOf","term_name":"dyslexia","termid":"MONDO:0005489"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dyslexia, susceptibility to, 9","secondary_identifiers":["UMLS:C1845296","MEDGEN:375623","OMIM:300509"],"synonyms":[{"name":"DYX9","type":"exact"},{"name":"dyslexia, susceptibility to, 9","type":"exact"}],"termid":"MONDO:0010348","xrefs":{"Monarch":{"xref_id":"0010348"}}}


id: GO:0044566
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in the morphology or behavior of a chondrocyte resulting from exposure to an activating factor such as a cellular or soluble ligand. A chondrocyte is a polymorphic cell that forms cartilage.","definition_xrefs":["CL:0000138","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell activation","termid":"GO:0001775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chondrocyte activation","termid":"GO:0044566"}


id: GO:0044066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change that impairs the structure or function of the host cell nucleus.","definition_xrefs":["MITRE:tk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated disruption of host cellular anatomical structure","termid":"GO:0052008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated disruption of host cell nucleus","synonyms":[{"name":"disruption by symbiont of host cell nucleus","type":"exact"},{"name":"modification by symbiont of host cell nucleus","type":"related"},{"name":"modification by symbiont of host nucleus","type":"exact"},{"name":"modification of host cell nucleus by symbiont","type":"exact"},{"name":"modification of host nucleus by symbiont","type":"exact"}],"termid":"GO:0044066"}


id: GO:1901265
data:
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id: GO:1990861
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  {"annotated_genes":["SJAG_02663"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[80527],"is_not":false,"summary":null,"term":"GO:1990861"}]},"cv_name":"cellular_component","definition":"A protein complex that cleaves ubiquitin from specific substrates. In the budding yeast Saccharomyces cerevisiae, this complex consists of Ubp3p and Bre5p.","definition_xrefs":["PMID:18391941","PMID:12778054","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidase complex","termid":"GO:1905368"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02663":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Ubp3-Bre5 deubiquitination complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"Ubp3-Bre5 ubiquitin protease complex","type":"exact"}],"termid":"GO:1990861","terms_by_termid":{"GO:1990861":null}}


id: PBO:0082136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Actin-related protein that binds nucleosomes; a component of the SWR1 complex, which exchanges histone variant H2AZ (Htz1p) for chromatin-bound histone H2A","termid":"PBO:0082136"}


id: MONDO:0011061
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"choreatic disease","termid":"MONDO:0001595"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chorea, remitting, with nystagmus and cataract","secondary_identifiers":["MESH:C535355","MEDGEN:330463","UMLS:C1832422","OMIM:601372"],"synonyms":[{"name":"chorea, remitting with nystagmus and cataracts","type":"related"},{"name":"chorea, remitting, with nystagmus and cataract","type":"exact"},{"name":"familial remitting chorea, nystagmus and cataracts","type":"related"}],"termid":"MONDO:0011061","xrefs":{"Monarch":{"xref_id":"0011061"}}}


id: PBO:0044966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrogenase/reductase 12","termid":"PBO:0044966"}


id: FYPO:0001791
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic spindle pole body duplication is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0001350"},{"relation_name":"is_a","term_name":"abnormal cellular component assembly during vegetative growth","termid":"FYPO:0001354"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle process","termid":"FYPO:0002737"},{"relation_name":"is_a","term_name":"abnormal spindle pole body organization","termid":"FYPO:0003560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0001985","FYPO:0000002","FYPO:0000631","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abnormal mitotic spindle pole body duplication","synonyms":[{"name":"abnormal mitotic SPB duplication","type":"exact"},{"name":"abnormal mitotic spindle pole body duplication during vegetative growth","type":"exact"},{"name":"abnormal spindle pole body duplication during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001791"}


id: PBO:0080574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 1","termid":"PBO:0080574"}


id: PBO:0045322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dedicator of cytokinesis 2","termid":"PBO:0045322"}


id: PBO:0074333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1","termid":"PBO:0074333"}


id: MONDO:0010128
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Thyrocerebrorenal syndrome is characterized by renal, neurologic, thyroid disease, associated with thrombocytopenia. It has been described in a brother and his sister. Intelligence was normal. It is transmitted as an autosomal recessive trait.","definition_xrefs":["Orphanet:3327"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyrocerebrorenal syndrome","secondary_identifiers":["SCTID:733096007","OMIM:274240","MEDGEN:341311","GARD:1646","MESH:C536908","UMLS:C1848813"],"synonyms":[{"name":"Cutler Bass Romshe syndrome","type":"exact"},{"name":"Cutler-Bass-Romshe syndrome","type":"exact"},{"name":"thyrocerebral-retinal syndrome","type":"related"},{"name":"thyrocerebroretinal syndrome","type":"exact"}],"termid":"MONDO:0010128","xrefs":{"Monarch":{"xref_id":"0010128"}}}


id: GO:0050933
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of an early stripe melanocyte (ESM). In zebrafish, ESMs develop during the first phase (2-3 weeks of development) of the larva to adult transition (2-4 weeks of development).","definition_xrefs":["PMID:11858836"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanocyte differentiation","termid":"GO:0030318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"early stripe melanocyte differentiation","synonyms":[{"name":"early stripe melanocyte cell differentiation","type":"exact"},{"name":"early stripe melanophore differentiation","type":"exact"}],"termid":"GO:0050933"}


id: PBO:0056522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MBTPS1 divergent transcript","termid":"PBO:0056522"}


id: PBO:0085703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in rRNA and ribosome biogenesis; activated in stochastic pulses of nuclear localization; binds polymerase A and C motif; subunit of the RPD3L histone deacetylase complex; has chromatin specific SANT domain; involved in telomeric gene silencing and filamentation; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0085703"}


id: MONDO:0043114
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Landy-Donnai syndrome","secondary_identifiers":["MEDGEN:419417","MESH:C537266","UMLS:C2931460"],"synonyms":[{"name":"hydrops, ectrodactyly, syndactyly, duplication of the great toes","type":"related"}],"termid":"MONDO:0043114","xrefs":{"Monarch":{"xref_id":"0043114"}}}


id: PBO:0063966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PU.1 (SPI1) induced regulator of S100A8 and S100A9 alarmin transcription 1","termid":"PBO:0063966"}


id: GO:0035440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of tuberculosinol (halima-5,6,dien-15-ol), a secondary metabolite in Mycobacteria.","definition_xrefs":["MetaCyc:PWY-5935"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diterpenoid biosynthetic process","termid":"GO:0016102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"tuberculosinol biosynthetic process","synonyms":[{"name":"halima-5,6,dien-15-ol biosynthesis","type":"exact"},{"name":"halima-5,6,dien-15-ol biosynthetic process","type":"exact"},{"name":"tuberculosinol biosynthesis","type":"exact"}],"termid":"GO:0035440"}


id: PBO:0005808
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"the chromatin assembly function of H2Bub is independent of H3K4 methylation","termid":"PBO:0005808"}


id: PBO:0078168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta diversity 1","termid":"PBO:0078168"}


id: PBO:0046605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K9, member 7","termid":"PBO:0046605"}


id: PBO:0114286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mon1-Ccz1 GEF complex subunit Ccz1","termid":"PBO:0114286"}


id: GO:0007055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of the spindle during meiosis II of a meiotic cell cycle in males. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle assembly involved in male meiosis","termid":"GO:0007053"},{"relation_name":"part_of","term_name":"male meiosis II","termid":"GO:0007142"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0140013","GO:0000226","GO:0008150","GO:0007049","GO:0044085","GO:0007010"],"is_obsolete":false,"name":"spindle assembly involved in male meiosis II","synonyms":[{"name":"male meiosis II spindle assembly","type":"related"}],"termid":"GO:0007055"}


id: PBO:0066198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 15B","termid":"PBO:0066198"}


id: MONDO:0021144
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, borderline, or malignant epithelial tumor of the ovary that is characterized by a predominance of clear and hobnail cells.","definition_xrefs":["NCIT:C40076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian epithelial tumor","termid":"MONDO:0002229"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian clear cell tumor","secondary_identifiers":["MEDGEN:138040","ONCOTREE:CCOV","UMLS:C0346164"],"synonyms":[{"name":"clear cell ovarian cancer","type":"related"},{"name":"ovarian clear cell neoplasm","type":"exact"},{"name":"ovarian clear cell tumor","type":"exact"}],"termid":"MONDO:0021144","xrefs":{"Monarch":{"xref_id":"0021144"}}}


id: PBO:0046760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome component 2","termid":"PBO:0046760"}


id: MONDO:0008456
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinocerebellar ataxia with rigidity and peripheral neuropathy","secondary_identifiers":["MESH:C566669","OMIM:183050","UMLS:C1866770","MEDGEN:401079"],"synonyms":[{"name":"spinocerebellar ataxia with rigidity and peripheral neuropathy","type":"exact"}],"termid":"MONDO:0008456","xrefs":{"Monarch":{"xref_id":"0008456"}}}


id: GO:0002629
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of proteolysis associated with antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antigen processing and presentation of peptide antigen","termid":"GO:0002584"},{"relation_name":"is_a","term_name":"regulation of proteolysis associated with antigen processing and presentation","termid":"GO:0002628"},{"relation_name":"is_a","term_name":"negative regulation of protein catabolic process","termid":"GO:0042177"},{"relation_name":"is_a","term_name":"negative regulation of proteolysis involved in protein catabolic process","termid":"GO:1903051"},{"relation_name":"negatively_regulates","term_name":"proteolysis associated with antigen processing and presentation","termid":"GO:0002496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0030163"},{"rel_name":"negatively_regulates","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"negative regulation of proteolysis associated with antigen processing and presentation","synonyms":[{"name":"down regulation of proteolysis associated with antigen processing and presentation","type":"exact"},{"name":"down-regulation of proteolysis associated with antigen processing and presentation","type":"exact"},{"name":"downregulation of proteolysis associated with antigen processing and presentation","type":"exact"},{"name":"inhibition of proteolysis associated with antigen processing and presentation","type":"narrow"}],"termid":"GO:0002629"}


id: GO:0080008
data:
  {"annotated_genes":["SJAG_00756","SJAG_03680","SJAG_04574","SJAG_02119","SJAG_04540","SJAG_00341","SJAG_01480","SJAG_03454","SJAG_04087","SJAG_01540","SJAG_03417","SJAG_01573","SJAG_03130"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72587,77952,92672,92720,98494,107169],"is_not":false,"summary":null,"term":"GO:0080008"},{"annotations":[115839,98536,119555,96155,112329,120689],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043494"},{"annotations":[71740],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031464"}]},"cv_name":"cellular_component","definition":"A ubiquitin ligase complex in which a cullin from the Cul4 family and a RING domain protein form the catalytic core; substrate specificity is conferred by an adaptor protein.","definition_xrefs":["PMID:18552200","PMID:16792691","PMID:18223036"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cullin-RING ubiquitin ligase complex","termid":"GO:0031461"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00341":null,"SJAG_00756":null,"SJAG_01480":null,"SJAG_01540":null,"SJAG_01573":null,"SJAG_02119":null,"SJAG_03130":null,"SJAG_03417":null,"SJAG_03454":null,"SJAG_03680":null,"SJAG_04087":null,"SJAG_04540":null,"SJAG_04574":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Cul4-RING E3 ubiquitin ligase complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0080008","terms_by_termid":{"GO:0031464":null,"GO:0043494":null,"GO:0080008":null}}


id: SO:0000879
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a sequence that contains the code for two gene products.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polycistronic","termid":"SO:0000880"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dicistronic","termid":"SO:0000879"}


id: PBO:0049913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HEXIM P-TEFb complex subunit 1","termid":"PBO:0049913"}


id: GO:0008650
data:
  {"annotated_genes":["SJAG_00722","SJAG_03332","SJAG_03773"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77426,77671,80469],"is_not":false,"summary":null,"term":"GO:0008650"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a uridine in rRNA + S-adenosyl-L-methionine = a 2'-O-methyluridine in rRNA + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["RHEA:54152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA (uridine) methyltransferase activity","termid":"GO:0016436"},{"relation_name":"is_a","term_name":"RNA 2'-O-methyltransferase activity","termid":"GO:0062105"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00722":null,"SJAG_03332":null,"SJAG_03773":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0140098","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"rRNA (uridine-2'-O-)-methyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-6793127"],"termid":"GO:0008650","terms_by_termid":{"GO:0008650":null}}


id: PBO:0062473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily G member 1","termid":"PBO:0062473"}


id: GO:0035909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of an aorta are generated and organized. An aorta is an artery that carries blood from the heart to other parts of the body.","definition_xrefs":["GOC:dgh","UBERON:0000947","Wikipedia:Aorta","GOC:bf","MA:0000062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"artery morphogenesis","termid":"GO:0048844"},{"relation_name":"part_of","term_name":"aorta development","termid":"GO:0035904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aorta morphogenesis","termid":"GO:0035909"}


id: PBO:0114647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER protein translocation subcomplex DNAJ domain subunit Sec63","termid":"PBO:0114647"}


id: PBO:0082611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Coenzyme Q (ubiquinone) binding protein; functions in the delivery of Q<sub>6</sub> to its proper location for electron transport during respiration; START domain protein with homologs in bacteria and eukaryotes; respiratory growth defect of the null mutant is functionally complemented by human COQ10A","termid":"PBO:0082611"}


id: MONDO:0013645
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive syndromic cerebellar ataxia in which the cause of the disease is a mutation in the SYT14 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive syndromic cerebellar ataxia","termid":"MONDO:0020047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005559"],"is_obsolete":false,"name":"autosomal recessive spinocerebellar ataxia 11","secondary_identifiers":["GARD:17312","OMIM:614229","Orphanet:284271","UMLS:C5190803","DOID:0080063","MEDGEN:1681191"],"synonyms":[{"name":"SCAR11","type":"exact"},{"name":"SYT14 autosomal recessive syndromic cerebellar ataxia","type":"exact"},{"name":"autosomal recessive cerebellar ataxia-psychomotor retardation syndrome","type":"related"},{"name":"autosomal recessive spinocerebellar ataxia 11","type":"exact"},{"name":"autosomal recessive spinocerebellar ataxia type 11","type":"exact"},{"name":"autosomal recessive syndromic cerebellar ataxia caused by mutation in SYT14","type":"exact"},{"name":"spinocerebellar ataxia, autosomal recessive 11","type":"related"},{"name":"spinocerebellar ataxia, autosomal recessive type 11","type":"exact"}],"termid":"MONDO:0013645","xrefs":{"Monarch":{"xref_id":"0013645"}}}


id: MONDO:0012152
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"excluded_subClassOf","term_name":"attention deficit-hyperactivity disorder","termid":"MONDO:0007743"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"attention deficit-hyperactivity disorder, susceptibility to, 4","secondary_identifiers":["MEDGEN:373267","UMLS:C1837150","OMIM:608906"],"synonyms":[{"name":"ADHD4","type":"exact"},{"name":"attention Deficit-hyperactivity disorder, susceptibility to, type 4","type":"exact"},{"name":"attention deficit-hyperactivity disorder, susceptibility to, 4","type":"exact"}],"termid":"MONDO:0012152","xrefs":{"Monarch":{"xref_id":"0012152"}}}


id: PBO:0052804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 71","termid":"PBO:0052804"}


id: PBO:0034412
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_maturation_of","termid":"PBO:0034412"}


id: GO:0033495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ferulate, (2E)-3-(4-hydroxy-3-methoxyphenyl)prop-2-enoate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ferulate metabolic process","termid":"GO:0033494"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"ferulate biosynthetic process","synonyms":[{"name":"ferulate anabolism","type":"exact"},{"name":"ferulate biosynthesis","type":"exact"},{"name":"ferulate formation","type":"exact"},{"name":"ferulate synthesis","type":"exact"}],"termid":"GO:0033495"}


id: PBO:0042652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDYL pseudogene 1","termid":"PBO:0042652"}


id: PBO:0002168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF2B epsilon subunit (predicted)","termid":"PBO:0002168"}


id: PBO:0053552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 559","termid":"PBO:0053552"}


id: SO:0000697
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes a transcript with stop codon readthrough.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_part","term_name":"stop_codon_read_through","termid":"SO:0000883"},{"relation_name":"is_a","term_name":"gene_with_recoded_mRNA","termid":"SO:0000693"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_with_stop_codon_read_through","synonyms":[{"name":"gene with stop codon read through","type":"exact"}],"termid":"SO:0000697"}


id: PBO:0005738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit VIa (predicted)","termid":"PBO:0005738"}


id: PBO:0029043
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_6,7-dimethyl-8-ribityllumazine_synthase_activity","termid":"PBO:0029043"}


id: PBO:0069927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1219, pseudogene","termid":"PBO:0069927"}


id: MONDO:0030919
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual disability, autosomal dominant 53","secondary_identifiers":["DOID:0080228","GARD:16473","MEDGEN:1623344","UMLS:C4540481","EFO:0009165","OMIM:617798"],"synonyms":[{"name":"MRD53","type":"related"},{"name":"autosomal dominant intellectual disability 53","type":"related"},{"name":"autosomal dominant mental retardation 53","type":"related"},{"name":"intellectual disability, autosomal dominant 53","type":"exact"},{"name":"mental retardation, autosomal dominant 53","type":"related"}],"termid":"MONDO:0030919","xrefs":{"Monarch":{"xref_id":"0030919"}}}


id: FYPO:0006765
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the phosphorylation of one or more specific proteins, or of specific protein sites, is abnormal during the meiotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein phosphorylation","termid":"FYPO:0002677"},{"relation_name":"is_a","term_name":"abnormal cellular process during meiotic cell cycle","termid":"FYPO:0007260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002274","FYPO:0002494","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein phosphorylation during meiotic cell cycle","termid":"FYPO:0006765"}


id: MONDO:0011295
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A schizophrenia that has material basis in an autosomal dominant mutation of SCZD7 on chromosome 13q32.","definition_xrefs":["DOID:0070083"],"direct_ancestors":[{"relation_name":"is_a","term_name":"schizophrenia","termid":"MONDO:0005090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"schizophrenia 7","secondary_identifiers":["MEDGEN:350350","OMIM:603176","UMLS:C1864152"],"synonyms":[{"name":"SCZD7","type":"exact"},{"name":"schizophrenia 7","type":"exact"},{"name":"schizophrenia 7 with or without an affective disorder","type":"related"},{"name":"schizophrenia susceptibility locus, chromosome 13Q-related","type":"related"}],"termid":"MONDO:0011295","xrefs":{"Monarch":{"xref_id":"0011295"}}}


id: PBO:0054151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1518","termid":"PBO:0054151"}


id: PBO:0043084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholinergic receptor nicotinic beta 4 subunit","termid":"PBO:0043084"}


id: GO:0062086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vein smooth muscle contraction.","definition_xrefs":["PMID:8428203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vascular associated smooth muscle contraction","termid":"GO:0003056"},{"relation_name":"regulates","term_name":"vein smooth muscle contraction","termid":"GO:0014826"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vein smooth muscle contraction","termid":"GO:0062086"}


id: GO:1900838
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of fumigaclavine C biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of ergot alkaloid biosynthetic process","termid":"GO:1900823"},{"relation_name":"is_a","term_name":"regulation of fumigaclavine C biosynthetic process","termid":"GO:1900837"},{"relation_name":"negatively_regulates","term_name":"fumigaclavine C biosynthetic process","termid":"GO:1900809"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"negative regulation of fumigaclavine C biosynthetic process","synonyms":[{"name":"inhibition of fumigaclavine C biosynthetic process","type":"narrow"}],"termid":"GO:1900838"}


id: PBO:0025454
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione synthetase deficiency","termid":"PBO:0025454"}


id: GO:2000761
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of N-terminal peptidyl-lysine acetylation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein maturation","termid":"GO:1903319"},{"relation_name":"is_a","term_name":"positive regulation of peptidyl-lysine acetylation","termid":"GO:2000758"},{"relation_name":"is_a","term_name":"regulation of N-terminal peptidyl-lysine acetylation","termid":"GO:2000759"},{"relation_name":"positively_regulates","term_name":"N-terminal peptidyl-lysine acetylation","termid":"GO:0018076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0051604"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0051604"],"is_obsolete":false,"name":"positive regulation of N-terminal peptidyl-lysine acetylation","termid":"GO:2000761"}


id: PBO:0087205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosylmethionine-dependent lysine methyltransferase; involved in the trimethylation of eEF1A (Tef1p/Tef2p) at lysine 79; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; required for replication of Brome mosaic virus in budding yeast; expresses a circular RNA; originally misclassified as a N-6-adenine specific DNA methyltransferase based on sequence similarity; both Efm5p and human ortholog N6AMT2 can methylate eEF1a from either species in vitro","termid":"PBO:0087205"}


id: GO:0044296
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The terminal specialization found in some types of dendrites which consists of numerous small terminal branches, giving the dendrite a tufted appearance.","definition_xrefs":["NIF_Subcellular:sao1340260079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendrite terminus","termid":"GO:0044292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dendritic tuft","synonyms":[{"name":"dendrite tuft","type":"exact"}],"termid":"GO:0044296"}


id: PBO:0071943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4X pseudogene 20","termid":"PBO:0071943"}


id: MONDO:0045051
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cataract (disease) that involves the lens cortex.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cataract","termid":"MONDO:0005129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cortical cataract","secondary_identifiers":["MEDGEN:82868","SCTID:193576003","ICD9:366.03","NCIT:C135177","icd11.foundation:1118806999","UMLS:C0271160"],"synonyms":[{"name":"cataract (disease) of lens cortex","type":"exact"},{"name":"lens cortex cataract (disease)","type":"exact"}],"termid":"MONDO:0045051","xrefs":{"Monarch":{"xref_id":"0045051"}}}


id: PBO:0056356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP9 antisense RNA 1","termid":"PBO:0056356"}


id: GO:1904620
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a dimethyl sulfoxide stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:12873812"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"response to dimethyl sulfoxide","termid":"GO:1904619"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to dimethyl sulfoxide","synonyms":[{"name":"cellular response to DMSO","type":"exact"}],"termid":"GO:1904620"}


id: PBO:0086223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that forms a complex with Thp3p; may have a role in transcription elongation and/or mRNA splicing; identified as a COP9 signalosome component but phenotype and interactions suggest it may not be involved with the signalosome","termid":"PBO:0086223"}


id: PBO:0090480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, oxidative stress-responsive Pap1/Caf3","termid":"PBO:0090480"}


id: PBO:0081934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zn regulated GTPase metalloprotein activator 1D, pseudogene","termid":"PBO:0081934"}


id: MOD:00107
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to L-tryptophan amide.","definition_xrefs":["PubMed:3947348","RESID:AA0098"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C1-amidated residue","termid":"MOD:00883"},{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-tryptophan amide","synonyms":[{"name":"(2S)-2-amino-3-(1H-indol-3-yl)propanamide","type":"exact"},{"name":"L-tryptophan amide","type":"exact"},{"name":"MOD_RES Tryptophan amide","type":"exact"},{"name":"TrpN","type":"exact"},{"name":"amidated L-tryptophan","type":"exact"},{"name":"tryptophanamide","type":"exact"}],"termid":"MOD:00107"}


id: GO:0018778
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: trichloroacetate + 2 H2O = 3 H+ + 3 Cl- + oxalate.","definition_xrefs":["PMID:7068529"],"gene_count":0,"genotype_count":0,"name":"obsolete DL-2 haloacid dehalogenase activity (obsolete GO:0018778)","termid":"GO:0018778"}


id: GO:0010819
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of T cell chemotaxis. T cell chemotaxis is the directed movement of a T cell in response to an external stimulus.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lymphocyte chemotaxis","termid":"GO:1901623"},{"relation_name":"is_a","term_name":"regulation of T cell migration","termid":"GO:2000404"},{"relation_name":"regulates","term_name":"T cell chemotaxis","termid":"GO:0010818"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T cell chemotaxis","termid":"GO:0010819"}


id: FYPO:0002315
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of all-trans-farnesyl diphosphate (FPP) measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular phosphorus level","termid":"FYPO:0001543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal cellular FPP level","synonyms":[{"name":"normal cellular 2-trans,6-trans-farnesyl diphosphate level","type":"exact"},{"name":"normal cellular FPP accumulation","type":"related"},{"name":"normal cellular FPP level during mitotic cell cycle","type":"related"},{"name":"normal cellular FPP level during vegetative growth","type":"exact"},{"name":"normal cellular farnesyl diphosphate level","type":"broad"},{"name":"normal cellular farnesyl pyrophosphate level","type":"broad"}],"termid":"FYPO:0002315"}


id: GO:0080050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of seed development.","definition_xrefs":["PMID:19141706"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of post-embryonic development","termid":"GO:0048580"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"seed development","termid":"GO:0048316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of seed development","termid":"GO:0080050"}


id: PBO:0046754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex component 7","termid":"PBO:0046754"}


id: MONDO:0022405
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete retinal ciliopathy due to mutation in nephronophthisis gene (obsolete MONDO:0022405)","secondary_identifiers":["Orphanet:156180"],"termid":"MONDO:0022405","xrefs":{"Monarch":{"xref_id":"0022405"}}}


id: PR:O74940
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glutamine-dependent NAD(+) synthetase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR23090:SF1","OMA:SCHPO04261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine-dependent NAD(+) synthetase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC553.02","secondary_identifiers":["UniProtKB:O74940"],"synonyms":[{"name":"NAD(+) synthase [glutamine-hydrolyzing] (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-NADSYN1","type":"exact"}],"termid":"PR:O74940"}


id: PBO:0060835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD8 ubiquitin like modifier","termid":"PBO:0060835"}


id: PBO:0063578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PERP pseudogene 1","termid":"PBO:0063578"}


id: SO:0002351
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A fragile site found in the chromosomes of less than five percent of the human population.","definition_xrefs":["PMID:16236432","PMID:17608616"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fragile_site","termid":"SO:0002349"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rare_fragile_site","termid":"SO:0002351"}


id: MONDO:0044330
data:
  {"annotated_genes":["SJAG_04203"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88328],"is_not":false,"summary":null,"term":"MONDO:0044330"}]},"cv_name":"mondo","definition":"Hyperekplexia-4 is an autosomal recessive severe neurologic disorder apparent at birth. Affected infants have extreme hypertonia and appear stiff and rigid. They have little if any development, poor or absent visual contact, and no spontaneous movement, consistent with an encephalopathy. Some patients have early-onset refractory seizures, and many have inguinal or umbilical hernia. Most patients die in the first months of life due to respiratory failure or other complications (summary by {2:Piard et al., 2018}).nnFor a general description and a discussion of genetic heterogeneity of hyperekplexia, see HKPX1 (OMIM:149400).","definition_xrefs":["OMIM:618011"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary hyperekplexia","termid":"MONDO:0021022"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04203":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"hyperekplexia 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16284","UMLS:C4693933","DOID:0080581","MEDGEN:1642659"],"synonyms":[{"name":"HKPX4","type":"related"},{"name":"hyperekplexia 4","type":"exact"}],"termid":"MONDO:0044330","terms_by_termid":{"MONDO:0044330":null},"xrefs":{"Monarch":{"xref_id":"0044330"}}}


id: PBO:0004385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, Iqw1","termid":"PBO:0004385"}


id: GO:0030954
data:
  {"annotated_genes":["SJAG_02737"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118807],"is_not":false,"summary":null,"term":"GO:0030954"}]},"cv_name":"biological_process","definition":"The 'de novo' formation of an astral microtubule, in which tubulin heterodimers form metastable oligomeric aggregates, some of which go on to support formation of a complete microtubule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"astral microtubule organization","termid":"GO:0030953"},{"relation_name":"is_a","term_name":"microtubule nucleation by microtubule organizing center","termid":"GO:0051418"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02737":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0007010","GO:0007049","GO:0000226","GO:0044085"],"is_obsolete":false,"name":"astral microtubule nucleation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030954","terms_by_termid":{"GO:0030954":null}}


id: PBO:0044791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin alpha 4","termid":"PBO:0044791"}


id: FYPO:0000764
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of cycloheximide than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0002682","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"resistance to cycloheximide","synonyms":[{"name":"resistance to cycloheximide during mitotic cell cycle","type":"related"},{"name":"resistance to cycloheximide during vegetative growth","type":"exact"},{"name":"resistant to cycloheximide","type":"exact"}],"termid":"FYPO:0000764"}


id: MONDO:0024457
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"PLA2G6-associated neurodegeneration","termid":"MONDO:0017998"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002039","MONDO:0005244","MONDO:0005559"],"is_obsolete":false,"name":"neurodegeneration with brain iron accumulation 2A","secondary_identifiers":["NCIT:C84927","SCTID:52713000","DOID:0110735","UMLS:C0270724","OMIM:256600","MEDGEN:82852","ICD9:330.8","GARD:3957","NANDO:1200537","Orphanet:35069","MESH:C536071"],"synonyms":[{"name":"Hunter Carpenter Macdonald syndrome","type":"related"},{"name":"Hunter-Carpenter-McDonald syndrome","type":"related"},{"name":"INAD","type":"exact"},{"name":"INAD1","type":"related"},{"name":"KARAK syndrome, included","type":"related"},{"name":"NBIA2A","type":"exact"},{"name":"NBIA2a","type":"exact"},{"name":"PLAN","type":"exact"},{"name":"Seitelberger disease","type":"broad"},{"name":"inaD","type":"exact"},{"name":"infantile neuroaxonal dystrophy","type":"exact"},{"name":"infantile neuroaxonal dystrophy 1","type":"exact"},{"name":"infantile neuroaxonal dystrophy/atypical neuroaxonal dystrophy","type":"related"},{"name":"neuroaxonal dystrophy presenting with neonatal dysmorphic features, early onset of peripheral gangrene","type":"related"},{"name":"neuroaxonal dystrophy, infantile","type":"related"},{"name":"neurodegeneration with brain iron accumulation 2A","type":"exact"},{"name":"neurodegeneration with brain iron accumulation type 2A","type":"exact"},{"name":"neurodegeneration with brain iron accumulation type 2a","type":"exact"},{"name":"neurodegeneration, PLA2G6-associated","type":"exact"},{"name":"neurodegeneration, Pla2G6-associated","type":"exact"},{"name":"neurodegeneration, Pla2g6-associated","type":"exact"},{"name":"phospholipase A2-associated neurodegeneration","type":"exact"}],"termid":"MONDO:0024457","xrefs":{"Monarch":{"xref_id":"0024457"}}}


id: PBO:0083141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps 3' end of ORF HOT1/YMR172W","termid":"PBO:0083141"}


id: GO:1902037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hematopoietic stem cell differentiation.","definition_xrefs":["GOC:TermGenie","PMID:23403623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of hematopoietic progenitor cell differentiation","termid":"GO:1901533"},{"relation_name":"is_a","term_name":"regulation of hematopoietic stem cell differentiation","termid":"GO:1902036"},{"relation_name":"is_a","term_name":"negative regulation of stem cell differentiation","termid":"GO:2000737"},{"relation_name":"negatively_regulates","term_name":"hematopoietic stem cell differentiation","termid":"GO:0060218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hematopoietic stem cell differentiation","synonyms":[{"name":"down regulation of haematopoietic stem cell differentiation","type":"exact"},{"name":"down regulation of haemopoietic stem cell differentiation","type":"exact"},{"name":"down regulation of hematopoietic stem cell differentiation","type":"exact"},{"name":"down regulation of hemopoietic stem cell differentiation","type":"exact"},{"name":"down-regulation of haematopoietic stem cell differentiation","type":"exact"},{"name":"down-regulation of haemopoietic stem cell differentiation","type":"exact"},{"name":"down-regulation of hematopoietic stem cell differentiation","type":"exact"},{"name":"down-regulation of hemopoietic stem cell differentiation","type":"exact"},{"name":"downregulation of haematopoietic stem cell differentiation","type":"exact"},{"name":"downregulation of haemopoietic stem cell differentiation","type":"exact"},{"name":"downregulation of hematopoietic stem cell differentiation","type":"exact"},{"name":"downregulation of hemopoietic stem cell differentiation","type":"exact"},{"name":"inhibition of haematopoietic stem cell differentiation","type":"narrow"},{"name":"inhibition of haemopoietic stem cell differentiation","type":"narrow"},{"name":"inhibition of hematopoietic stem cell differentiation","type":"narrow"},{"name":"inhibition of hemopoietic stem cell differentiation","type":"narrow"},{"name":"negative regulation of haematopoietic stem cell differentiation","type":"exact"},{"name":"negative regulation of haemopoietic stem cell differentiation","type":"exact"},{"name":"negative regulation of hemopoietic stem cell differentiation","type":"exact"}],"termid":"GO:1902037"}


id: PBO:0042927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chorionic gonadotropin subunit beta 7","termid":"PBO:0042927"}


id: PBO:0031328
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_cisplatin","termid":"PBO:0031328"}


id: PBO:0054200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1580","termid":"PBO:0054200"}


id: PBO:0059412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S35 pseudogene 2","termid":"PBO:0059412"}


id: PBO:0001423
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.2.1","termid":"PBO:0001423"}


id: FYPO:0002454
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which all cells in the population are inviable and have abnormal cell morphology (i.e. size, shape, or structure), in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable vegetative cell population with abnormal cell morphology (obsolete FYPO:0002454)","termid":"FYPO:0002454"}


id: PBO:0030610
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_calcium_level","termid":"PBO:0030610"}


id: GO:0014037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a Schwann cell. Schwann cells are found in the peripheral nervous system, where they insulate neurons and axons, and regulate the environment in which neurons function.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell differentiation","termid":"GO:0010001"},{"relation_name":"part_of","term_name":"peripheral nervous system development","termid":"GO:0007422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Schwann cell differentiation","termid":"GO:0014037"}


id: PBO:0078215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 7-8","termid":"PBO:0078215"}


id: GO:0042907
data:
  {"annotated_genes":["SJAG_04717"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[81685],"is_not":false,"summary":null,"term":"GO:0042907"}]},"cv_name":"molecular_function","definition":"Enables the transfer of xanthine from one side of a membrane to the other. Xanthine (2,6-dihydroxypurine) is a purine formed in the metabolic breakdown of guanine, but is not present in nucleic acids.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase transmembrane transporter activity","termid":"GO:0005345"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04717":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"xanthine transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0042907","terms_by_termid":{"GO:0042907":null}}


id: MONDO:0001916
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tularemia that results in formation of ulcerative lesions located in gastrointestinal tract. The infection has symptom fever, has symptom chills, has symptom malaise, has symptom muscle aches, and has symptom vomiting.","definition_xrefs":["DOID:14239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tularemia","termid":"MONDO:0018077"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gastrointestinal tularemia","secondary_identifiers":["UMLS:C0494039","ICD9:021.8","ICD10CM:A21.3","MEDGEN:1684658","ICD9:021.1"],"synonyms":[{"name":"enteric tularemia","type":"exact"},{"name":"intestinal tularaemia","type":"exact"}],"termid":"MONDO:0001916","xrefs":{"Monarch":{"xref_id":"0001916"}}}


id: GO:1900472
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of phosphatidylcholine biosynthetic process by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:8614637","GOC:dgf","GOC:TermGenie","PMID:8056324"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of phosphatidylcholine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:1900472)","synonyms":[{"name":"positive regulation of phosphatidylcholine anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of phosphatidylcholine biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of phosphatidylcholine formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of phosphatidylcholine synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900472"}


id: GO:0005938
data:
  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region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins.","definition_xrefs":["ISBN:0815316194","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasm","termid":"GO:0005737"},{"relation_name":"part_of","term_name":"cell 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id: GO:0019549
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of glutamate into succinate, that includes the conversion of 4-aminobutyrate to succinate semialdehyde by the pyruvate-dependent gamma aminobutyrate (GABA) transaminase.","definition_xrefs":["MetaCyc:PWY-4321","GOC:bf","GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete glutamate catabolic process to succinate via succinate semialdehyde (obsolete GO:0019549)","termid":"GO:0019549"}


id: PBO:0082933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic assembly chaperone for ribosomal protein Rps2p; co-translationally associates with the N-terminal extension of Rps2p to facilitate expression, solubility and ribosome assembly; released prior to the nuclear import of Rps2p; required for correct processing of 20S pre-rRNA at site D to generate mature 18S rRNA; essential gene in the S288C background but not in CEN.PK2; homologous to human PDCD2L and PDCD2","termid":"PBO:0082933"}


id: PBO:0050206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 23","termid":"PBO:0050206"}


id: MONDO:0043339
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A paralytic condition of the legs caused by ingestion of lathyrogens, especially beta-aminopropionitrile or beta-N-oxalyl amino-L-alanine, which are found in the seeds of plants of the genus lathyrus.","definition_xrefs":["MESH:D007842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lathyrism","secondary_identifiers":["SCTID:5724005"],"synonyms":[{"name":"Lathyrus species poisoning","type":"exact"},{"name":"Neurolathyrism","type":"related"},{"name":"lathyrism","type":"exact"},{"name":"vetchling poisoning","type":"related"}],"termid":"MONDO:0043339","xrefs":{"Monarch":{"xref_id":"0043339"}}}


id: GO:0061193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the taste bud over time, from its formation to the mature state. The taste bud is a specialized area of the tongue that contains taste receptors.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory organ development","termid":"GO:0007423"},{"relation_name":"part_of","term_name":"tongue development","termid":"GO:0043586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"taste bud development","termid":"GO:0061193"}


id: MONDO:0008662
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant vitreoretinochoroidopathy (ADVIRC) is a genetic vitreous-retinal disease characterized by ocular developmental anomalies such as microcornea, a shallow anterior chamber, glaucoma and cataract. Abnormal chorioretinal pigmentation is present, usually lying between the vortex veins and the ora serrata for 360 degrees.","definition_xrefs":["Orphanet:3086"],"direct_ancestors":[{"relation_name":"is_a","term_name":"BEST1-related vitreoretinochoroidopathy","termid":"MONDO:0700240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"autosomal dominant vitreoretinochoroidopathy","secondary_identifiers":["OMIM:193220","SCTID:711162004","UMLS:C3888099","ICD10CM:H35.5","MESH:C536352","icd11.foundation:96951767","DOID:0111569","GARD:5507","MEDGEN:854768"],"synonyms":[{"name":"ADVIRC","type":"exact"},{"name":"VRCP","type":"related"},{"name":"VRCP autosomal dominant","type":"related"},{"name":"microcornea, Rod-cone dystrophy, cataract, and posterior staphyloma","type":"related"},{"name":"vitreoretinochoroidopathy","type":"related"},{"name":"vitreoretinochoroidopathy dominant","type":"related"},{"name":"vitreoretinochoroidopathy with microcornea, glaucoma, and cataract","type":"related"},{"name":"vitreoretinochoroidopathy, autosomal dominant","type":"related"},{"name":"vitreoretinochoroidopathy, autosomal dominant, with nanophthalmos","type":"related"}],"termid":"MONDO:0008662","xrefs":{"Monarch":{"xref_id":"0008662"}}}


id: MONDO:0100088
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete late-onset familial alzheimer disease (obsolete MONDO:0100088)","termid":"MONDO:0100088","xrefs":{"Monarch":{"xref_id":"0100088"}}}


id: PBO:0050401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein C pseudogene 2","termid":"PBO:0050401"}


id: MONDO:0017236
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the glomeruli that is characterized by a rapid loss in renal function with glomerular crescent formation observed on biopsy; it is often seen in patients with concomitant autoimmune disease, like Goodpasture's syndrome or systemic lupus erythematosus.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerulonephritis","termid":"MONDO:0002462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"rapidly progressive glomerulonephritis","secondary_identifiers":["DOID:4776","MedDRA:10018378","UMLS:C0221239","NANDO:1200723","ICD9:580.4","NANDO:1200714","SCTID:236392004","ICD9:582.4","NCIT:C35264","MEDGEN:113155","ICD9:583.4","Orphanet:280569"],"synonyms":[{"name":"RPGN","type":"exact"},{"name":"crescentic glomerulonephritis","type":"related"}],"termid":"MONDO:0017236","xrefs":{"Monarch":{"xref_id":"0017236"}}}


id: PBO:0091714
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"was previously incorrectly named as mtx2","termid":"PBO:0091714"}


id: MONDO:0859337
data:
  {"annotated_genes":["SJAG_04317"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87381],"is_not":false,"summary":null,"term":"MONDO:0859337"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04317":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"combined oxidative phosphorylation deficiency 57","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1824048","DOID:0070430","OMIM:620167","UMLS:C5774275"],"termid":"MONDO:0859337","terms_by_termid":{"MONDO:0859337":null},"xrefs":{"Monarch":{"xref_id":"0859337"}}}


id: GO:1902738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the process in which a chondroblast acquires specialized structural and/or functional features of a chondrocyte that will contribute to the development of a bone. A chondrocyte is a polymorphic cell that forms cartilage.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:8662546"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chondrocyte differentiation","termid":"GO:0032330"},{"relation_name":"is_a","term_name":"regulation of bone development","termid":"GO:1903010"},{"relation_name":"is_a","term_name":"regulation of animal organ morphogenesis","termid":"GO:2000027"},{"relation_name":"regulates","term_name":"chondrocyte differentiation involved in endochondral bone morphogenesis","termid":"GO:0003413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of chondrocyte differentiation involved in endochondral bone morphogenesis","termid":"GO:1902738"}


id: RO:0008505
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"An interaction relationship wherein one organism creates a structure or environment that is lived in by another organism.","direct_ancestors":[{"relation_name":"is_a","term_name":"ecologically_related_to","termid":"RO:0002321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"creates_habitat_for","termid":"RO:0008505"}


id: GO:0014861
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of skeletal muscle contraction by depolarization of muscle membrane and ionic fluxes.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:mtg_muscle","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of skeletal muscle contraction","termid":"GO:0014819"},{"relation_name":"is_a","term_name":"regulation of action potential","termid":"GO:0098900"},{"relation_name":"regulates","term_name":"regulation of skeletal muscle contraction by action potential","termid":"GO:0100001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of skeletal muscle contraction via regulation of action potential","synonyms":[{"name":"regulation of skeletal muscle contraction via membrane action potential","type":"related"}],"termid":"GO:0014861"}


id: PATO:0000784
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000784 excretory function value (obsolete PATO:0000784)","termid":"PATO:0000784"}


id: PR:Q9UUE5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nup85 gene.","definition_xrefs":["UniProtKB:Q9UUE5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin nup85 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17G9.04c","synonyms":[{"name":"Spom972h-nup85","type":"exact"},{"name":"nuclear pore protein nup85 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UUE5"}


id: PBO:0066426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine-glutamic acid dipeptide repeats pseudogene 1 Y-linked","termid":"PBO:0066426"}


id: PR:P05734
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl1901 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P05734"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L19-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC56F2.02","synonyms":[{"name":"Spom972h-rpl1901","type":"exact"},{"name":"YL15 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P05734"}


id: GO:0050496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of peptidyl-glutamine residues by deamidation and esterification with omega-hydroxyceramide.","definition_xrefs":["RESID:AA0347","PMID:10411887"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-L-glutamyl 5-omega-hydroxyceramide ester biosynthetic process from peptidyl-glutamine (obsolete GO:0050496)","synonyms":[{"name":"peptidyl-L-glutamyl 5-omega-hydroxyceramide ester anabolism from peptidyl-glutamine","type":"exact"},{"name":"peptidyl-L-glutamyl 5-omega-hydroxyceramide ester formation from peptidyl-glutamine","type":"exact"},{"name":"peptidyl-L-glutamyl 5-omega-hydroxyceramide ester synthesis from peptidyl-glutamine","type":"exact"}],"termid":"GO:0050496"}


id: MONDO:0020999
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic chronic primary adrenal insufficiency (obsolete MONDO:0020999)","secondary_identifiers":["Orphanet:101960"],"termid":"MONDO:0020999","xrefs":{"Monarch":{"xref_id":"0020999"}}}


id: MONDO:0014067
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short ulna-dysmorphism-hypotonia-intellectual disability syndrome","secondary_identifiers":["UMLS:C3554609","OMIM:615162","Orphanet:357175","DOID:0081201","GARD:17548","MEDGEN:767523"],"synonyms":[{"name":"MRT35","type":"related"},{"name":"intellectual disability, autosomal recessive 35","type":"related"},{"name":"mental retardation, autosomal recessive 35","type":"related"}],"termid":"MONDO:0014067","xrefs":{"Monarch":{"xref_id":"0014067"}}}


id: PBO:0117414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zDHHC palmitoyltransferase 9","termid":"PBO:0117414"}


id: GO:1990074
data:
  {"annotated_genes":["SJAG_03876","SJAG_02383","SJAG_02370","SJAG_04118"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[67872,92597,119096],"is_not":false,"summary":null,"term":"GO:1990074"},{"annotations":[93490],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0036450"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a messenger RNA (mRNA) molecule, initiated by the enzymatic addition of a sequence of uridylyl residues (polyuridylation) at the 3' end of the target mRNA.","definition_xrefs":["GOC:vw","PMID:23503588"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA catabolic process","termid":"GO:0006402"},{"relation_name":"is_a","term_name":"modification-dependent macromolecule catabolic process","termid":"GO:0043632"},{"relation_name":"is_a","term_name":"mRNA destabilization","termid":"GO:0061157"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02370":null,"SJAG_02383":null,"SJAG_03876":null,"SJAG_04118":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"positively_regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016071","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"polyuridylation-dependent mRNA catabolic process","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:1990074","terms_by_termid":{"GO:0036450":null,"GO:1990074":null}}


id: GO:0046328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of signal transduction mediated by the JNK cascade.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of MAPK cascade","termid":"GO:0043408"},{"relation_name":"regulates","term_name":"JNK cascade","termid":"GO:0007254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of JNK cascade","synonyms":[{"name":"regulation of SAPK cascade","type":"broad"}],"termid":"GO:0046328"}


id: MONDO:0006675
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete benign monoclonal gammopathy (obsolete MONDO:0006675)","termid":"MONDO:0006675","xrefs":{"Monarch":{"xref_id":"0006675"}}}


id: MOD:01437
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue, an L-proline residue, and an L-serine residue to cyclo[(prolylserin)-O-yl] cysteinate.","definition_xrefs":["RESID:AA0489#TRI","PubMed:7961166"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclo[(prolylserin)-O-yl] cysteinate","termid":"MOD:01629"},{"relation_name":"is_a","term_name":"crosslinked L-proline residue","termid":"MOD:02054"},{"relation_name":"is_a","term_name":"crosslinked L-serine residue","termid":"MOD:02055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"cyclo[(prolylserin)-O-yl] cysteinate (Cys-Pro-Ser cross-link)","synonyms":[{"name":"(3,6-dioxopyrrolo[4,5-a]piperazin-2-yl)methyl cysteinate","type":"exact"},{"name":"MOD_RES Cyclo[(prolylserin)-O-yl] cysteinate","type":"exact"},{"name":"[(3S,8aS)-1,4-dioxooctahydropyrrolo[1,2-a]pyrazin-3-yl]methyl (2R)-2-amino-3-sulfanylpropanoate","type":"exact"},{"name":"cyclo[(prolylserin)-O-yl] cysteinate","type":"exact"}],"termid":"MOD:01437"}


id: PBO:0016582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complememtnation, functionally complements S. cerevisiae YOR330C","termid":"PBO:0016582"}


id: GO:0050290
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + sphingomyelin = ceramide 1-phosphate + choline + H+.","definition_xrefs":["EC:3.1.4.41","RHEA:20984"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase activity","termid":"GO:0004620"},{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"sphingomyelin phosphodiesterase D activity","secondary_identifiers":["MetaCyc:SPHINGOMYELIN-PHOSPHODIESTERASE-D-RXN","KEGG_REACTION:R02542"],"synonyms":[{"name":"sphingomyelin ceramide-phosphohydrolase activity","type":"related"},{"name":"sphingomyelinase D","type":"related"}],"termid":"GO:0050290"}


id: PBO:0027255
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_level_during_nitrogen_starvation","termid":"PBO:0027255"}


id: PBO:0053219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galectin like","termid":"PBO:0053219"}


id: PR:Q9Y7M3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC9B6.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7M3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FYVE-type zinc finger-containing protein C9B6.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC9B6.03","synonyms":[{"name":"Spom972h-SPBC9B6.03","type":"exact"}],"termid":"PR:Q9Y7M3"}


id: MONDO:0005414
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Schizophrenia which does not respond to commonly used treatments.","definition_xrefs":["EFO:0004609"],"direct_ancestors":[{"relation_name":"is_a","term_name":"schizophrenia","termid":"MONDO:0005090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"treatment-refractory schizophrenia","secondary_identifiers":["MEDGEN:1786789","UMLS:C3544321"],"synonyms":[{"name":"TRS","type":"broad"},{"name":"refractory schizophrenia","type":"exact"},{"name":"treatment-refractory schizophrenia","type":"exact"}],"termid":"MONDO:0005414","xrefs":{"Monarch":{"xref_id":"0005414"}}}


id: GO:0019410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The metabolic process in which carbon monoxide (CO) is oxidized to carbon dioxide (CO2) to generate energy. Conservation of energy in this process likely uses sodium ion gradients for ATP synthesis and is coupled to quantitative sulfide methylation.","definition_xrefs":["PMID:18024677"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aerobic respiration","termid":"GO:0009060"},{"relation_name":"is_a","term_name":"energy derivation by oxidation of reduced inorganic compounds","termid":"GO:0015975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"aerobic respiration, using carbon monoxide as electron donor","termid":"GO:0019410"}


id: GO:0043137
data:
  {"annotated_genes":["SJAG_03780","SJAG_01648","SJAG_02039","SJAG_06022","SJAG_01884","SJAG_04183","SJAG_00400"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63429,77716,81986],"is_not":false,"summary":null,"term":"GO:0043137"},{"annotations":[105976,114377,104772,90117],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903469"}]},"cv_name":"biological_process","definition":"Removal of the Okazaki RNA primer from the lagging strand of replicating DNA, by a combination of the actions of DNA polymerase, DNA helicase and an endonuclease.","definition_xrefs":["GOC:jl","PMID:12424238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA catabolic process","termid":"GO:0006401"},{"relation_name":"part_of","term_name":"DNA replication","termid":"GO:0006260"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00400":null,"SJAG_01648":null,"SJAG_01884":null,"SJAG_02039":null,"SJAG_03780":null,"SJAG_04183":null,"SJAG_06022":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006260","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"DNA replication, removal of RNA primer","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"Okazaki initiator RNA removal","type":"exact"}],"termid":"GO:0043137","terms_by_termid":{"GO:0043137":null,"GO:1903469":null}}


id: PBO:0034702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane bound O-acyltransferase, MBOAT Gup1 (predicted)","termid":"PBO:0034702"}


id: PBO:0060579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 15","termid":"PBO:0060579"}


id: GO:0035637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transfer of information occurring at the level of a multicellular organism.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete multicellular organismal signaling (obsolete GO:0035637)","synonyms":[{"name":"multicellular organismal signalling","type":"exact"}],"termid":"GO:0035637"}


id: MONDO:0006550
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign polypoid lesion of mesodermal origin that arises from the urethra.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skin tag","termid":"MONDO:0004026"},{"relation_name":"is_a","term_name":"urethral disorder","termid":"MONDO:0004184"},{"relation_name":"is_a","term_name":"fibroepithelial polyp","termid":"MONDO:0060765"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroepithelial polyp of urethra","secondary_identifiers":["DOID:8108","MEDGEN:234460","NCIT:C6170","UMLS:C1336884"],"synonyms":[{"name":"fibroepithelial polyp of the urethra","type":"exact"},{"name":"fibroepithelial polyp of urethra","type":"exact"},{"name":"skin tag of urethra","type":"related"},{"name":"urethra fibroepithelial polyp","type":"exact"},{"name":"urethra skin tag","type":"exact"},{"name":"urethral fibroepithelial polyp","type":"exact"}],"termid":"MONDO:0006550","xrefs":{"Monarch":{"xref_id":"0006550"}}}


id: GO:1901842
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of high voltage-gated calcium channel activity.","definition_xrefs":["PMID:12754254","GOC:TermGenie","GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of voltage-gated calcium channel activity","termid":"GO:1901386"},{"relation_name":"is_a","term_name":"regulation of high voltage-gated calcium channel activity","termid":"GO:1901841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of high voltage-gated calcium channel activity","synonyms":[{"name":"down regulation of high voltage gated calcium channel activity","type":"exact"},{"name":"down regulation of high voltage-dependent calcium channel activity","type":"exact"},{"name":"down regulation of high voltage-gated calcium channel activity","type":"exact"},{"name":"down-regulation of high voltage gated calcium channel activity","type":"exact"},{"name":"down-regulation of high voltage-dependent calcium channel activity","type":"exact"},{"name":"down-regulation of high voltage-gated calcium channel activity","type":"exact"},{"name":"downregulation of high voltage gated calcium channel activity","type":"exact"},{"name":"downregulation of high voltage-dependent calcium channel activity","type":"exact"},{"name":"downregulation of high voltage-gated calcium channel activity","type":"exact"},{"name":"inhibition of high voltage gated calcium channel activity","type":"exact"},{"name":"inhibition of high voltage-dependent calcium channel activity","type":"exact"},{"name":"inhibition of high voltage-gated calcium channel activity","type":"narrow"},{"name":"negative regulation of high voltage gated calcium channel activity","type":"exact"},{"name":"negative regulation of high voltage-dependent calcium channel activity","type":"exact"}],"termid":"GO:1901842"}


id: GO:0070260
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of 5'-phosphotyrosyl groups formed as covalent intermediates (in DNA backbone breakage) between DNA topoisomerase II and DNA.","definition_xrefs":["PMID:16751265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tyrosyl-DNA phosphodiesterase activity","termid":"GO:0070259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0140097","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"5'-tyrosyl-DNA phosphodiesterase activity","termid":"GO:0070260"}


id: PBO:0041227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 43","termid":"PBO:0041227"}


id: GO:0000966
data:
  {"annotated_genes":["SJAG_04224","SJAG_04006","SJAG_04488","SJAG_04233","SJAG_03796","SJAG_02250","SJAG_04767","SJAG_00955","SJAG_01713","SJAG_04034","SJAG_04527","SJAG_00772","SJAG_01623","SJAG_00195","SJAG_04582","SJAG_06613","SJAG_03901","SJAG_04524","SJAG_01724"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76753],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036261"},{"annotations":[77231,74085,70222,109529],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006370"},{"annotations":[103986],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106410"},{"annotations":[72088,110848,74651,79704],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000472"},{"annotations":[109291],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000465"},{"annotations":[60457],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0106005"},{"annotations":[97214],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000967"},{"annotations":[61929],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099116"},{"annotations":[61023,65542,72957,59652,81173,100293],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001682"}]},"cv_name":"biological_process","definition":"Any process involved in forming the mature 5' end of an RNA molecule.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA processing","termid":"GO:0006396"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00195":null,"SJAG_00772":null,"SJAG_00955":null,"SJAG_01623":null,"SJAG_01713":null,"SJAG_01724":null,"SJAG_02250":null,"SJAG_03796":null,"SJAG_03901":null,"SJAG_04006":null,"SJAG_04034":null,"SJAG_04224":null,"SJAG_04233":null,"SJAG_04488":null,"SJAG_04524":null,"SJAG_04527":null,"SJAG_04582":null,"SJAG_04767":null,"SJAG_06613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"RNA 5'-end processing","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"RNA 5' end processing","type":"exact"}],"termid":"GO:0000966","terms_by_termid":{"GO:0000465":null,"GO:0000472":null,"GO:0000967":null,"GO:0001682":null,"GO:0006370":null,"GO:0036261":null,"GO:0099116":null,"GO:0106005":null,"GO:0106410":null}}


id: GO:0098644
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex of collagen trimers such as a fibril or collagen network.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"supramolecular complex","termid":"GO:0099080"},{"relation_name":"part_of","term_name":"extracellular matrix","termid":"GO:0031012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"complex of collagen trimers","synonyms":[{"name":"Supramolecular aggregate of collagen","type":"exact"},{"name":"Supramolecular collagen assembly","type":"exact"}],"termid":"GO:0098644"}


id: GO:0005641
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region between the two lipid bilayers of the nuclear envelope; 20-40 nm wide.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle envelope lumen","termid":"GO:0031970"},{"relation_name":"part_of","term_name":"nuclear envelope","termid":"GO:0005635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575"],"is_obsolete":false,"name":"nuclear envelope lumen","secondary_identifiers":["GO:0005653"],"synonyms":[{"name":"nuclear intermembrane space","type":"exact"},{"name":"nuclear membrane lumen","type":"related"},{"name":"perinuclear space","type":"exact"}],"termid":"GO:0005641"}


id: PBO:0091437
data:
  {"annotation_feature_type":"gene","cv_name":"PomGeneExProt","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription increased","termid":"PBO:0091437"}


id: PBO:0070681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 52","termid":"PBO:0070681"}


id: PBO:0074250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier organic anion transporter family member 1A2","termid":"PBO:0074250"}


id: PBO:0077661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor superfamily member 10b","termid":"PBO:0077661"}


id: MONDO:0005099
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Intracranial hemorrhage into the subarachnoid space.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"},{"relation_name":"is_a","term_name":"neurovascular disorder","termid":"MONDO:0043218"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subarachnoid hemorrhage","secondary_identifiers":["SCTID:21454007","HP:0002138","MEDGEN:11625","ICD9:430","UMLS:C0038525","MESH:D013345","EFO:0000713"],"synonyms":[{"name":"subarachnoid haemorrhage (disease)","type":"exact"},{"name":"subarachnoid hemorrhage","type":"exact"},{"name":"subarachnoid hemorrhage (disease)","type":"exact"}],"termid":"MONDO:0005099","xrefs":{"Monarch":{"xref_id":"0005099"}}}


id: GO:0097559
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cilium (also called flagellum) found in Giardia species (trophozoite stage). It is nucleated by the right ventral basal body and exits the cell body proximally and dorsal to the ventral disc.","definition_xrefs":["GOC:giardia","PMID:16607022","ISBN:9780124260207","PMID:5961344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"9+2 motile cilium","termid":"GO:0097729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"right ventral flagellum","synonyms":[{"name":"right ventral cilium","type":"exact"}],"termid":"GO:0097559"}


id: PBO:0061449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor subfamily 4 group A member 1","termid":"PBO:0061449"}


id: GO:0080178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the addition of a 5-carbamoylmethyl group to a uridine residue in RNA.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA methylation","termid":"GO:0030488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006399"],"is_obsolete":false,"name":"5-carbamoylmethyl uridine residue modification","synonyms":[{"name":"5-carbamoylmethyluridine metabolic process","type":"related"}],"termid":"GO:0080178"}


id: MONDO:0014257
data:
  {"annotated_genes":["SJAG_00933"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87614],"is_not":false,"summary":null,"term":"MONDO:0014257"}]},"cv_name":"mondo","definition":"Any nephrotic syndrome in which the cause of the disease is a mutation in the COQ8B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial idiopathic steroid-resistant nephrotic syndrome","termid":"MONDO:0019006"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00933":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"nephrotic syndrome, type 9","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:615573","DOID:0080391","GARD:15989","UMLS:C3809965","MEDGEN:816295"],"synonyms":[{"name":"COQ8B nephrotic syndrome","type":"exact"},{"name":"NPHS9","type":"related"},{"name":"nephrotic syndrome caused by mutation in COQ8B","type":"exact"},{"name":"nephrotic syndrome, type 9","type":"exact"}],"termid":"MONDO:0014257","terms_by_termid":{"MONDO:0014257":null},"xrefs":{"Monarch":{"xref_id":"0014257"}}}


id: GO:0043034
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Regular periodic sub membranous arrays of vinculin in skeletal and cardiac muscle cells, these arrays link Z-discs to the sarcolemma and are associated with links to extracellular matrix.","definition_xrefs":["PMID:6405378","GOC:jl","ISBN:0198506732","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"myofibril","termid":"GO:0030016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"costamere","secondary_identifiers":["Wikipedia:Costamere"],"termid":"GO:0043034"}


id: PBO:0028565
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_intragenic_meiotic_recombination","termid":"PBO:0028565"}


id: PR:Q1MTR7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC16H5.14c gene.","definition_xrefs":["UniProtKB:Q1MTR7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase C16H5.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16H5.14c","synonyms":[{"name":"Spom972h-SPBC16H5.14c","type":"exact"}],"termid":"PR:Q1MTR7"}


id: PBO:0056071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphocyte antigen 6 family member G5B","termid":"PBO:0056071"}


id: PBO:0068733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5A small nuclear 4, pseudogene","termid":"PBO:0068733"}


id: PBO:0066483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ret finger protein like 1","termid":"PBO:0066483"}


id: PBO:0042437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC42 intronic transcript 1","termid":"PBO:0042437"}


id: PBO:0091952
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by S. cerevisiae SRP54","termid":"PBO:0091952"}


id: PBO:0035799
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-complete_but_unequal_mitotic_sister_chromatid_segregation_with_unseparated_chromosomes","termid":"PBO:0035799"}


id: PBO:0089693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Munc family exocytic/endocytic regulator Ync13","termid":"PBO:0089693"}


id: PBO:0070430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome production factor 2 homolog","termid":"PBO:0070430"}


id: MONDO:0003581
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An embryonal carcinoma arising from the ovary. Signs and symptoms include the presence of an abdominal mass and abdominal pain.","definition_xrefs":["NCIT:C8108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonal carcinoma","termid":"MONDO:0005440"},{"relation_name":"is_a","term_name":"malignant non-dysgerminomatous germ cell tumor of ovary","termid":"MONDO:0016096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ovarian embryonal carcinoma","secondary_identifiers":["SCTID:254872007","EFO:1000415","ONCOTREE:OEC","UMLS:C0346183","DOID:5681","MEDGEN:91090"],"synonyms":[{"name":"embryonal carcinoma","type":"related"},{"name":"embryonal carcinoma of ovary","type":"exact"},{"name":"embryonal carcinoma of the ovary","type":"exact"},{"name":"ovarian embryonal carcinoma","type":"exact"},{"name":"ovary embryonal carcinoma","type":"exact"}],"termid":"MONDO:0003581","xrefs":{"Monarch":{"xref_id":"0003581"}}}


id: GO:0008733
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arabinose = L-ribulose.","definition_xrefs":["EC:5.3.1.4","RHEA:14821"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"L-arabinose isomerase activity","secondary_identifiers":["MetaCyc:ARABISOM-RXN","KEGG_REACTION:R01761"],"synonyms":[{"name":"L-arabinose aldose-ketose-isomerase activity","type":"related"},{"name":"L-arabinose ketol-isomerase activity","type":"related"}],"termid":"GO:0008733"}


id: PBO:0040740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCR pseudogene 6","termid":"PBO:0040740"}


id: PBO:0055272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2699","termid":"PBO:0055272"}


id: FYPO:0001924
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that enters the cell cycle but then undergoes cell cycle arrest, and eventually dies without completing cell division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"abnormally arrested mitotic cell cycle progression","termid":"FYPO:0000502"},{"relation_name":"is_a","term_name":"abnormally arrested mitotic cell cycle progression","termid":"FYPO:0000502"},{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division","termid":"FYPO:0001991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000631","FYPO:0000002","FYPO:0001985","FYPO:0000004"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, cell cycle arrest","synonyms":[{"name":"inviable following spore germination, without cell division, cell cycle arrest","type":"exact"},{"name":"inviable germinated spore, without cell division, cell cycle arrest","type":"exact"},{"name":"lethal after spore germination, without cell division, cell cycle arrest","type":"exact"}],"termid":"FYPO:0001924"}


id: PBO:0013775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy protein Atg11","termid":"PBO:0013775"}


id: MONDO:0015962
data:
  {"annotated_genes":["SJAG_03371","SJAG_01896","SJAG_02977","SJAG_03375","SJAG_04978","SJAG_00516","SJAG_04260","SJAG_01370","SJAG_01183"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87274],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011422"},{"annotations":[88855],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010359"},{"annotations":[88713],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013458"},{"annotations":[87376],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859328"},{"annotations":[88462],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013163"},{"annotations":[89039],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010645"},{"annotations":[86778],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011301"},{"annotations":[87214],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044726"},{"annotations":[87926],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011268"},{"annotations":[88615],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054565"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"renal tubule disorder","termid":"MONDO:0021568"},{"relation_name":"is_a","term_name":"inherited kidney disorder","termid":"MONDO:0100191"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00516":null,"SJAG_01183":null,"SJAG_01370":null,"SJAG_01896":null,"SJAG_02977":null,"SJAG_03371":null,"SJAG_03375":null,"SJAG_04260":null,"SJAG_04978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"inherited renal tubular disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1826140","GARD:20306","Orphanet:183592","UMLS:C5680544"],"synonyms":[{"name":"genetic renal tubular disease","type":"related"}],"termid":"MONDO:0015962","terms_by_termid":{"MONDO:0010359":null,"MONDO:0010645":null,"MONDO:0011268":null,"MONDO:0011301":null,"MONDO:0011422":null,"MONDO:0013163":null,"MONDO:0013458":null,"MONDO:0044726":null,"MONDO:0054565":null,"MONDO:0859328":null},"xrefs":{"Monarch":{"xref_id":"0015962"}}}


id: PBO:0075293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 32","termid":"PBO:0075293"}


id: MONDO:1011741
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cutaneous papillomatosis, non-human animal","secondary_identifiers":["OMIA:001147"],"termid":"MONDO:1011741","xrefs":{"Monarch":{"xref_id":"1011741"}}}


id: PBO:0076343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin 10","termid":"PBO:0076343"}


id: GO:2000690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiac muscle cell myoblast differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myoblast differentiation","termid":"GO:0045661"},{"relation_name":"is_a","term_name":"regulation of cardioblast differentiation","termid":"GO:0051890"},{"relation_name":"regulates","term_name":"cardiac muscle cell myoblast differentiation","termid":"GO:0060379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac muscle cell myoblast differentiation","synonyms":[{"name":"regulation of cardiac myoblast differentiation","type":"related"},{"name":"regulation of myocardial precursor cell differentiation","type":"exact"}],"termid":"GO:2000690"}


id: GO:0070105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of an interleukin-6-mediated signaling pathway.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine-mediated signaling pathway","termid":"GO:0001961"},{"relation_name":"is_a","term_name":"regulation of interleukin-6-mediated signaling pathway","termid":"GO:0070103"},{"relation_name":"positively_regulates","term_name":"interleukin-6-mediated signaling pathway","termid":"GO:0070102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of interleukin-6-mediated signaling pathway","synonyms":[{"name":"positive regulation of IL-6-mediated signaling pathway","type":"exact"},{"name":"positive regulation of interleukin-6-mediated signalling pathway","type":"exact"}],"termid":"GO:0070105"}


id: MONDO:0800340
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"seasonal affective disorder, susceptibility to","synonyms":[{"name":"SAD, susceptibility to","type":"exact"}],"termid":"MONDO:0800340","xrefs":{"Monarch":{"xref_id":"0800340"}}}


id: PBO:0027495
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_etoposide","termid":"PBO:0027495"}


id: MONDO:0975838
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"intellectual disability, autosomal dominant","termid":"MONDO:0100172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual developmental disorder, autosomal dominant 75","secondary_identifiers":["OMIM:620988"],"termid":"MONDO:0975838","xrefs":{"Monarch":{"xref_id":"0975838"}}}


id: MONDO:0007348
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete colchicine resistance (obsolete MONDO:0007348)","secondary_identifiers":["OMIM:120080"],"synonyms":[{"name":"colchicine resistance","type":"exact"},{"name":"colchicine sensitivity","type":"related"}],"termid":"MONDO:0007348","xrefs":{"Monarch":{"xref_id":"0007348"}}}


id: FYECO:0000302
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which ammonium iron(2+) sulfate (ferrous ammonium sulfate) was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ ammonium iron(2+) sulfate","synonyms":[{"name":"+ ferrous ammonium sulfate (anhydrous)","type":"related"}],"termid":"FYECO:0000302"}


id: GO:0046609
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sulfate(out) + solute(in) = solute(in) + sulfate(out), by a channel in a cell membrane whose opening is governed by the membrane potential.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete voltage-gated sulfate antiporter activity (obsolete GO:0046609)","synonyms":[{"name":"prestin","type":"narrow"},{"name":"voltage gated sulfate antiporter activity","type":"exact"},{"name":"voltage-dependent sulfate antiporter activity","type":"exact"},{"name":"voltage-sensitive sulfate antiporter activity","type":"exact"},{"name":"voltage-sensitive sulphate antiporter activity","type":"exact"}],"termid":"GO:0046609"}


id: GO:0007083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The cell cycle process in which chromosome structure is altered from the condensed form taken on during mitosis to the relaxed disperse form held in resting cells.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete mitotic chromosome decondensation (obsolete GO:0007083)","termid":"GO:0007083"}


id: MONDO:0030684
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypogonadotropic hypogonadism","termid":"MONDO:0018555"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypogonadotropic hypogonadism 27 without anosmia","secondary_identifiers":["MEDGEN:1810165","OMIM:619755","UMLS:C5676921"],"synonyms":[{"name":"HH27","type":"exact"},{"name":"hypogonadotropic hypogonadism 27 without anosmia","type":"exact"}],"termid":"MONDO:0030684","xrefs":{"Monarch":{"xref_id":"0030684"}}}


id: PBO:0060066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 13","termid":"PBO:0060066"}


id: MONDO:0000522
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete inflammatory myofibroblastic tumor (obsolete MONDO:0000522)","termid":"MONDO:0000522","xrefs":{"Monarch":{"xref_id":"0000522"}}}


id: GO:0051404
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of Arg-Xaa bonds.","definition_xrefs":["EC:3.4.22.8"],"gene_count":0,"genotype_count":0,"name":"obsolete clostripain activity (obsolete GO:0051404)","synonyms":[{"name":"Clostridium histolyticum proteinase B","type":"related"},{"name":"alpha-clostridipain","type":"related"},{"name":"clostridiopeptidase B activity","type":"exact"},{"name":"clostripain activity","type":"exact"}],"termid":"GO:0051404"}


id: PBO:0075872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST3GAL1 divergent transcript","termid":"PBO:0075872"}


id: PBO:0070206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 133 pseudogene","termid":"PBO:0070206"}


id: PBO:0000396
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.2","termid":"PBO:0000396"}


id: PBO:0016560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"di-trans,poly-cis-decaprenylcistransferase Nus1","termid":"PBO:0016560"}


id: PBO:0004769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DASH complex subunit Dad4","termid":"PBO:0004769"}


id: PBO:0055810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysophosphatidylglycerol acyltransferase 1","termid":"PBO:0055810"}


id: GO:0002393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis or release of lysosomal enzymes following a stimulus as part of a inflammatory response, resulting in an increase in intracellular or extracellular levels.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"production of molecular mediator involved in inflammatory response","termid":"GO:0002532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lysosomal enzyme production involved in inflammatory response","synonyms":[{"name":"lysosomal enzyme production involved in acute inflammatory response","type":"broad"},{"name":"production of lysosomal enzymes involved in acute inflammatory response","type":"broad"},{"name":"production of lysosomal enzymes involved in inflammatory response","type":"exact"}],"termid":"GO:0002393"}


id: SO:0000415
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute to describe a feature that is invalidated due to polyA priming.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"invalidated","termid":"SO:0000790"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"invalidated_by_genomic_polyA_primed_cDNA","synonyms":[{"name":"invalidated by genomic polyA primed cDNA","type":"exact"}],"termid":"SO:0000415"}


id: PBO:0045250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C30","termid":"PBO:0045250"}


id: GO:0100038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that regulates cellular response to oxidative stress.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cellular response to oxidative stress by transcription from RNA polymerase II promoter (obsolete GO:0100038)","termid":"GO:0100038"}


id: PR:Q10438
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pby1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10438"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin--tyrosine ligase C12B10.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12B10.04","synonyms":[{"name":"Spom972h-pby1","type":"exact"}],"termid":"PR:Q10438"}


id: GO:0060297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of myofibril assembly by organization of muscle actomyosin into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actomyosin structure organization","termid":"GO:0110020"},{"relation_name":"is_a","term_name":"regulation of supramolecular fiber organization","termid":"GO:1902903"},{"relation_name":"regulates","term_name":"sarcomere organization","termid":"GO:0045214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0030036","GO:0008150"],"is_obsolete":false,"name":"regulation of sarcomere organization","synonyms":[{"name":"regulation of sarcomere organisation","type":"exact"}],"termid":"GO:0060297"}


id: PBO:0082209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-1,3-mannosyltransferase; integral membrane glycoprotein of the Golgi complex, required for addition of alpha1,3-mannose linkages to N-linked and O-linked oligosaccharides, one of five S. cerevisiae proteins of the MNN1 family","termid":"PBO:0082209"}


id: PBO:0048093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin light chain pseudogene 14","termid":"PBO:0048093"}


id: SO:0001175
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Base sequence at the 3' end of a tRNA. The 3'-hydroxyl group on the terminal adenosine is the attachment point for the amino acid.","definition_xrefs":["ISBN:0716719207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_region","termid":"SO:0001172"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCA_tail","synonyms":[{"name":"CCA sequence","type":"exact"},{"name":"CCA tail","type":"exact"}],"termid":"SO:0001175"}


id: FYPO:0001771
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a tRNA methyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0001985","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"abnormal tRNA methyltransferase activity","termid":"FYPO:0001771"}


id: GO:0097421
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regrowth of lost or destroyed liver.","definition_xrefs":["PMID:19447520","GOC:gap"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liver development","termid":"GO:0001889"},{"relation_name":"is_a","term_name":"animal organ regeneration","termid":"GO:0031100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"liver regeneration","termid":"GO:0097421"}


id: GO:0102960
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3beta-hydroxy-9beta-pimara-7,15-diene-19,6beta-olide + NAD(P) = momilactone A + H+ + NAD(P)H.","definition_xrefs":["EC:1.1.1.295"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"momilactone-A synthase [NAD(P)H] activity","secondary_identifiers":["RHEA:25363","MetaCyc:RXN-9290"],"termid":"GO:0102960"}


id: GO:0005927
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell-substrate junction found at the terminal anchorage site of skeletal muscle cells to tendons.","definition_xrefs":["GOC:mtg_muscle","PMID:12842007"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-substrate junction","termid":"GO:0030055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"muscle tendon junction","synonyms":[{"name":"myotendinous junction","type":"exact"}],"termid":"GO:0005927"}


id: PATO:0001976
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A surface feature shape quality inhering in a bearer by virtue of the bearer's having or lacking sharp straight-edged teeth pointing to the apex.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"edge shape","termid":"PATO:0002267"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serration","termid":"PATO:0001976"}


id: MONDO:0032926
data:
  {"annotated_genes":["SJAG_00375"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87275],"is_not":false,"summary":null,"term":"MONDO:0032926"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00375":null},"genotype_count":0,"is_obsolete":false,"name":"sandestig-stefanova syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:618804","DOID:0081272","UMLS:C5394118","MEDGEN:1718072"],"synonyms":[{"name":"SANDESTIG-STEFANOVA SYNDROME","type":"related"},{"name":"SANDSTEF","type":"related"}],"termid":"MONDO:0032926","terms_by_termid":{"MONDO:0032926":null},"xrefs":{"Monarch":{"xref_id":"0032926"}}}


id: MOD:00208
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-tyrosine residue and 5'-phosphoadenosine through a phosphodiester bond to form O4'-(phospho-5'-adenosine)-L-tyrosine.","definition_xrefs":["RESID:AA0203","Unimod:405#Y","PubMed:5543675","DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"adenylated residue","termid":"MOD:01165"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O4'-(phospho-5'-adenosine)-L-tyrosine","synonyms":[{"name":"(2S)-2-amino-3-[4-(5'-adenosine phosphonoxy)phenyl]propanoic acid","type":"exact"},{"name":"5'-adenylic-O-tyrosine","type":"exact"},{"name":"AMP binding site","type":"related"},{"name":"MOD_RES O-AMP-tyrosine","type":"exact"},{"name":"O-5'-Adenosylation ( of Tyrosine)","type":"exact"},{"name":"O4'-(phospho-5'-adenosine)-L-tyrosine","type":"exact"},{"name":"O4'-L-tyrosine 5'-adenosine phosphodiester","type":"exact"},{"name":"OAMPTyr","type":"exact"},{"name":"Phosphoadenosine","type":"related"},{"name":"hydrogen 5'-adenylate tyrosine ester","type":"exact"}],"termid":"MOD:00208"}


id: GO:0035933
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of any glucocorticoid hormone into the circulatory system. Glucocorticoids are a class of steroid hormones that regulate a variety of physiological processes, in particular control of the concentration of glucose in blood.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"corticosteroid hormone secretion","termid":"GO:0035930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"glucocorticoid secretion","termid":"GO:0035933"}


id: GO:1904786
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of asymmetric protein localization involved in cell fate determination.","definition_xrefs":["PMID:17476329","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein localization","termid":"GO:1903828"},{"relation_name":"is_a","term_name":"regulation of asymmetric protein localization involved in cell fate determination","termid":"GO:1904785"},{"relation_name":"negatively_regulates","term_name":"asymmetric protein localization involved in cell fate determination","termid":"GO:0045167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of asymmetric protein localization involved in cell fate determination","synonyms":[{"name":"down regulation of asymmetric protein localisation involved in cell fate determination","type":"exact"},{"name":"down regulation of asymmetric protein localization involved in cell fate commitment","type":"exact"},{"name":"down regulation of asymmetric protein localization involved in cell fate determination","type":"exact"},{"name":"down regulation of asymmetric protein localization resulting in cell fate commitment","type":"exact"},{"name":"down regulation of cell fate commitment, asymmetric protein localization","type":"exact"},{"name":"down-regulation of asymmetric protein localisation involved in cell fate determination","type":"exact"},{"name":"down-regulation of asymmetric protein localization involved in cell fate commitment","type":"exact"},{"name":"down-regulation of asymmetric protein localization involved in cell fate determination","type":"exact"},{"name":"down-regulation of asymmetric protein localization resulting in cell fate commitment","type":"exact"},{"name":"down-regulation of cell fate commitment, asymmetric protein localization","type":"exact"},{"name":"downregulation of asymmetric protein localisation involved in cell fate determination","type":"exact"},{"name":"downregulation of asymmetric protein localization involved in cell fate commitment","type":"exact"},{"name":"downregulation of asymmetric protein localization involved in cell fate determination","type":"exact"},{"name":"downregulation of asymmetric protein localization resulting in cell fate commitment","type":"exact"},{"name":"downregulation of cell fate commitment, asymmetric protein localization","type":"exact"},{"name":"inhibition of asymmetric protein localisation involved in cell fate determination","type":"narrow"},{"name":"inhibition of asymmetric protein localization involved in cell fate commitment","type":"narrow"},{"name":"inhibition of asymmetric protein localization involved in cell fate determination","type":"narrow"},{"name":"inhibition of asymmetric protein localization resulting in cell fate commitment","type":"narrow"},{"name":"inhibition of cell fate commitment, asymmetric protein localization","type":"narrow"},{"name":"negative regulation of asymmetric protein localisation involved in cell fate determination","type":"exact"},{"name":"negative regulation of asymmetric protein localization involved in cell fate commitment","type":"exact"},{"name":"negative regulation of asymmetric protein localization resulting in cell fate commitment","type":"exact"},{"name":"negative regulation of cell fate commitment, asymmetric protein localization","type":"exact"}],"termid":"GO:1904786"}


id: MONDO:0001225
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A substance abuse that involves the recurring use of opioid drugs despite negative consequences.","definition_xrefs":["DOID:11206"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance abuse","termid":"MONDO:0002491"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opioid abuse","secondary_identifiers":["ICD10CM:F11.1","MEDGEN:508001","UMLS:C0029095","ICD9:305.5","SCTID:5602001"],"termid":"MONDO:0001225","xrefs":{"Monarch":{"xref_id":"0001225"}}}


id: PBO:0077632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane O-mannosyltransferase targeting cadherins 4","termid":"PBO:0077632"}


id: PBO:0113326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unconfirmed function; involved in pyridoxine metabolism; expression is induced during stationary phase; forms putative glutamine amidotransferase complex with Snz1p, with Sno1p serving as the glutaminase; sno1-Δ affects abundance of mRNA from downstream gene CTF13","termid":"PBO:0113326"}


id: GO:1904182
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of pyruvate dehydrogenase activity.","definition_xrefs":["PMID:25525879","GOC:TermGenie","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of pyruvate dehydrogenase activity (obsolete GO:1904182)","synonyms":[{"name":"regulation of pyruvic acid dehydrogenase activity","type":"exact"},{"name":"regulation of pyruvic dehydrogenase activity","type":"exact"}],"termid":"GO:1904182"}


id: GO:1902794
data:
  {"annotated_genes":["SJAG_04574","SJAG_00769","SJAG_01867","SJAG_02382","SJAG_04186","SJAG_03844","SJAG_04768","SJAG_03624","SJAG_01599","SJAG_02622","SJAG_03664"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89305,92608,106015,112337,113966,118399],"is_not":false,"summary":null,"term":"GO:1902794"},{"annotations":[93683,99000,102124,119988,119619],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902801"}]},"cv_name":"biological_process","definition":"The formation of facultative heterochromatin into a heterochromatin domain, enriched in histone H3 methylated on lysine 9 (H3K9me), by a process independent of small interfering RNAs.","definition_xrefs":["PMID:22144463","PMID:24210919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"facultative heterochromatin formation","termid":"GO:0140718"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00769":null,"SJAG_01599":null,"SJAG_01867":null,"SJAG_02382":null,"SJAG_02622":null,"SJAG_03624":null,"SJAG_03664":null,"SJAG_03844":null,"SJAG_04186":null,"SJAG_04574":null,"SJAG_04768":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0006325","GO:0010467"],"is_obsolete":false,"name":"siRNA-independent facultative heterochromatin formation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"heterochromatin island assembly","type":"exact"},{"name":"heterochromatin island formation","type":"exact"},{"name":"siRNA-independent facultative heterochromatin assembly","type":"exact"}],"termid":"GO:1902794","terms_by_termid":{"GO:1902794":null,"GO:1902801":null}}


id: MONDO:0001482
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A myeloid or more commonly lymphoid leukemia (acute or chronic) affecting the testis. Microscopically, there is interstitial infiltration of the testis by leukemic cells. Acute lymphoblastic leukemia with testicular involvement is not uncommon in boys. Sometimes (up to 10% of the cases), testicular involvement may be the initial manifestation of relapsed acute lymphoblastic leukemia. --03","definition_xrefs":["NCIT:C9277"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukemia","termid":"MONDO:0005059"},{"relation_name":"is_a","term_name":"testicular cancer","termid":"MONDO:0005447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"testicular leukemia","secondary_identifiers":["DOID:12286","MEDGEN:234941","UMLS:C1336711"],"synonyms":[{"name":"testicular leukemia","type":"exact"}],"termid":"MONDO:0001482","xrefs":{"Monarch":{"xref_id":"0001482"}}}


id: GO:0006053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of N-acetylmannosamine, the acetylated derivative of mannosamine, 2-amino-2-deoxymannose.","definition_xrefs":["ISBN:0198506732","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetylmannosamine metabolic process","termid":"GO:0006051"},{"relation_name":"is_a","term_name":"mannosamine catabolic process","termid":"GO:0046346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-acetylmannosamine catabolic process","synonyms":[{"name":"N-acetylmannosamine breakdown","type":"exact"},{"name":"N-acetylmannosamine catabolism","type":"exact"},{"name":"N-acetylmannosamine degradation","type":"exact"}],"termid":"GO:0006053"}


id: GO:2000847
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of corticosteroid hormone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of steroid hormone secretion","termid":"GO:2000832"},{"relation_name":"is_a","term_name":"regulation of corticosteroid hormone secretion","termid":"GO:2000846"},{"relation_name":"negatively_regulates","term_name":"corticosteroid hormone secretion","termid":"GO:0035930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of corticosteroid hormone secretion","synonyms":[{"name":"negative regulation of corticosteroid secretion","type":"related"}],"termid":"GO:2000847"}


id: PBO:0036023
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_trimethylation_during_vegetative_growth","termid":"PBO:0036023"}


id: PBO:0017540
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Copper regulated Meiotic gene","termid":"PBO:0017540"}


id: PBO:0059572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 1X","termid":"PBO:0059572"}


id: PBO:0090910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-serine ammonia-lyase activity","termid":"PBO:0090910"}


id: PR:G2TRL6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1B2.06 gene.","definition_xrefs":["UniProtKB:G2TRL6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1B2.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B2.06","synonyms":[{"name":"Spom972h-SPAC1B2.06","type":"exact"}],"termid":"PR:G2TRL6"}


id: PBO:0067541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 687, pseudogene","termid":"PBO:0067541"}


id: PBO:0120061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP 3-'tRNA nucleotidyltransferase Cca2","termid":"PBO:0120061"}


id: MONDO:0100615
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Liver disease found in patients on parenteral nutrition for intestinal failure. May develop with few clinical features.","definition_xrefs":["PMID:31885838","PMID:32226616","PMID:16473076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liver disorder","termid":"MONDO:0005154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"intestinal failure–associated liver disease","termid":"MONDO:0100615","xrefs":{"Monarch":{"xref_id":"0100615"}}}


id: PBO:0078872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient receptor potential cation channel subfamily M member 6","termid":"PBO:0078872"}


id: PBO:0076963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TGFB induced factor homeobox 1","termid":"PBO:0076963"}


id: GO:1904848
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cell chemotaxis to fibroblast growth factor.","definition_xrefs":["PMID:23233752","GO_REF:0000058","GOC:rph","GOC:TermGenie","GOC:BHF_miRNA","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell migration","termid":"GO:0030336"},{"relation_name":"is_a","term_name":"negative regulation of chemotaxis","termid":"GO:0050922"},{"relation_name":"is_a","term_name":"negative regulation of cellular response to growth factor stimulus","termid":"GO:0090288"},{"relation_name":"is_a","term_name":"regulation of cell chemotaxis to fibroblast growth factor","termid":"GO:1904847"},{"relation_name":"negatively_regulates","term_name":"cell chemotaxis to fibroblast growth factor","termid":"GO:0035766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell chemotaxis to fibroblast growth factor","synonyms":[{"name":"down regulation of cell chemotaxis to fibroblast growth factor","type":"exact"},{"name":"down-regulation of cell chemotaxis to fibroblast growth factor","type":"exact"},{"name":"downregulation of cell chemotaxis to fibroblast growth factor","type":"exact"},{"name":"inhibition of cell chemotaxis to fibroblast growth factor","type":"narrow"}],"termid":"GO:1904848"}


id: FYPO:0007651
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to pericentric heterochromatin is abolished during mitosis.","definition_xrefs":["PomBase:mah","PMID:14730319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component organization","termid":"FYPO:0000335"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle process","termid":"FYPO:0002737"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"},{"relation_name":"is_a","term_name":"abnormal protein localization to pericentric heterochromatin","termid":"FYPO:0007648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"abolished protein localization to pericentric heterochromatin during mitosis","synonyms":[{"name":"abolished protein localization to centromeric heterochromatin during mitosis","type":"exact"},{"name":"abolished protein localization to nuclear centromeric heterochromatin during mitosis","type":"exact"},{"name":"abolished protein localization to pericentric heterochromatin during mitosis during vegetative growth","type":"exact"},{"name":"abolished protein localization to pericentric heterochromatin during mitotic M phase","type":"related"},{"name":"abolished protein localization to pericentric heterochromatin during mitotic nuclear division","type":"exact"}],"termid":"FYPO:0007651"}


id: FYPO:0007781
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the transition from yeast-form to hyphal growth begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal hyphal growth","termid":"FYPO:0007773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0007773"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0007773","FYPO:0000002"],"is_obsolete":false,"name":"delayed onset of hyphal transition","synonyms":[{"name":"delayed hyphal transition","type":"exact"},{"name":"delayed onset of transition to hyphal growth","type":"exact"}],"termid":"FYPO:0007781"}


id: GO:1904738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a vascular associated smooth muscle cell from one site to another.","definition_xrefs":["GOC:TermGenie","PMID:20693317","GO_REF:0000091","GOC:BHF","GOC:BHF_miRNA","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle cell migration","termid":"GO:0014909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vascular associated smooth muscle cell migration","synonyms":[{"name":"vascular smooth muscle cell migration","type":"exact"}],"termid":"GO:1904738"}


id: PBO:0081492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 385D","termid":"PBO:0081492"}


id: MONDO:0017149
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Drug- or toxin-induced pulmonary arterial hypertension (PAH) is a form of pulmonary arterial hypertension (PAH) secondary to the exposition to drugs. Drug- or toxin-induced PAH is characterized by elevated pulmonary arterial resistance leading to right heart failure. Drug or toxin induced PAH is progressive and potentially fatal.","definition_xrefs":["Orphanet:275786"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary arterial hypertension","termid":"MONDO:0015924"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"drug- or toxin-induced pulmonary arterial hypertension","secondary_identifiers":["EFO:0009192","MEDGEN:573792","GARD:21026","UMLS:C0340544"],"synonyms":[{"name":"drug- or toxin-induced PAH","type":"exact"}],"termid":"MONDO:0017149","xrefs":{"Monarch":{"xref_id":"0017149"}}}


id: GO:1990471
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to uni-strand piRNA clusters, double-stranded DNA regions that give rise to PIWI-interacting RNAs (piRNAs) that map predominantly to only one strand and exhibit hallmarks of canonical Pol II transcription. Uni-strand piRNA clusters are found in many taxa.","definition_xrefs":["PMID:24906153","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"piRNA cluster binding","termid":"GO:1990470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003677","GO:0005488"],"is_obsolete":false,"name":"piRNA uni-strand cluster binding","termid":"GO:1990471"}


id: PBO:0072293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S24 pseudogene 11","termid":"PBO:0072293"}


id: MONDO:0005097
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma arising from squamous bronchial epithelial cells. It may be keratinizing or non-keratinizing. Keratinizing squamous cell carcinoma is characterized by the presence of keratinization, pearl formation, and/or intercellular bridges. Non-keratinizing squamous cell carcinoma is characterized by the absence of keratinization, pearl formation, and intercellular bridges. Cigarette smoking and arsenic exposure are strongly associated with squamous cell lung carcinoma.","definition_xrefs":["NCIT:C3493"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"non-small cell lung carcinoma","termid":"MONDO:0005233"},{"relation_name":"is_a","term_name":"squamous cell carcinoma","termid":"MONDO:0005096"},{"relation_name":"is_a","term_name":"lung carcinoma","termid":"MONDO:0005138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"squamous cell lung carcinoma","secondary_identifiers":["ICD9:162.9","EFO:0000708","DOID:3907","ONCOTREE:LUSC","SCTID:254634000","UMLS:C0149782","MEDGEN:56202"],"synonyms":[{"name":"epidermoid cell carcinoma of lung","type":"exact"},{"name":"epidermoid cell carcinoma of the lung","type":"exact"},{"name":"epidermoid cell lung carcinoma","type":"exact"},{"name":"lung squamous cell carcinoma","type":"exact"},{"name":"squamous cell carcinoma of lung","type":"exact"},{"name":"squamous cell carcinoma of the lung","type":"exact"},{"name":"squamous cell lung cancer","type":"exact"},{"name":"squamous cell lung carcinoma","type":"exact"}],"termid":"MONDO:0005097","xrefs":{"Monarch":{"xref_id":"0005097"}}}


id: PBO:0028919
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_transcription","termid":"PBO:0028919"}


id: PBO:0084739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial intermembrane space protein; involved in phospholipid metabolism; forms complex with Mdm35p that transfers phosphatidylserine from outer membrane to inner membrane for phosphatidylethanolamine synthesis; null mutant has defects in mitochondrial morphology; similar to Ups1p, Ups3p and to human PRELI; UPS2 has a paralog, UPS3, that arose from the whole genome duplication","termid":"PBO:0084739"}


id: SO:0001016
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A purine-rich sequence in the group I introns which determines the locations of the splice sites in group I intron splicing and has catalytic activity.","definition_xrefs":["SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intron_domain","termid":"SO:0001014"},{"relation_name":"part_of","term_name":"group_I_intron","termid":"SO:0000587"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"internal_guide_sequence","synonyms":[{"name":"IGS","type":"exact"},{"name":"internal guide sequence","type":"exact"}],"termid":"SO:0001016"}


id: MONDO:1011021
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary late onset progressive symmetric ataxia, truncal sway, pelvic limb hypermetria, and impaired balance in dogs due to a variation in the CAPN1 gene.","definition_xrefs":["PMID:37341581"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder, non-human animal","termid":"MONDO:1011308"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinocerebellar ataxia, CAPN1-related, dog","secondary_identifiers":["OMIA:001820-9615"],"termid":"MONDO:1011021","xrefs":{"Monarch":{"xref_id":"1011021"}}}


id: MONDO:0001060
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An invasive adenocarcinoma confined to the mucosa or mucosa and submucosa of the gastric wall. The regional lymph nodes may or may not be involved. It usually occurs in the lesser curvature. The 5-year survival rate following resection is between 80 percent and 95 percent, and remains high even when lymph node metastases are present.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastric adenocarcinoma","termid":"MONDO:0005036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"microinvasive gastric cancer","secondary_identifiers":["UMLS:C0349530","MEDGEN:138098","NCIT:C27131","SCTID:276809004","DOID:10541"],"synonyms":[{"name":"EGC","type":"exact"},{"name":"early gastric cancer","type":"exact"},{"name":"superficial gastric cancer","type":"exact"},{"name":"superficial spreading gastric cancer","type":"exact"},{"name":"surface gastric cancer","type":"exact"}],"termid":"MONDO:0001060","xrefs":{"Monarch":{"xref_id":"0001060"}}}


id: GO:0098777
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Protein secretion through the outer membrane via the mechanism used for the secretion of curli subunits.","definition_xrefs":["PMID:19299134","PMID:24080089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transport across the cell outer membrane","termid":"GO:0098776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"protein secretion by the type VIII secretion system","synonyms":[{"name":"T8SS","type":"exact"}],"termid":"GO:0098777"}


id: PBO:0002587
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Binding Upb Nine of 62 kDa","termid":"PBO:0002587"}


id: MONDO:0500000
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by episodes of swelling under the skin (angioedema) and an elevated number of the white blood cells known as eosinophils (eosinophilia). During these episodes, symptoms of hives (urticaria), fever, swelling, weight gain and eosinophilia may occur. Symptoms usually appear every 3-4 weeks and resolve on their own within several days. Other cells may be elevated during the episodes, such as neutrophils and lymphocytes. Although the syndrome is often considered a subtype of the idiopathic hypereosinophilic syndromes, it does not typically have organ involvement or lead to other health concerns.","definition_xrefs":["GARD:0013029","PMID:25527564"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypereosinophilic syndrome","termid":"MONDO:0015691"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005267","MONDO:0005570"],"is_obsolete":false,"name":"episodic angioedema with eosinophilia","secondary_identifiers":["GARD:13029","MEDGEN:725561","icd11.foundation:1511563398","UMLS:C1304198"],"synonyms":[{"name":"EAE","type":"exact"},{"name":"Gleich syndrome","type":"exact"},{"name":"Gleich's syndrome","type":"exact"}],"termid":"MONDO:0500000","xrefs":{"Monarch":{"xref_id":"0500000"}}}


id: GO:1903267
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of ornithine catabolic process.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:12679340","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"negative regulation of amino acid metabolic process","termid":"GO:0045763"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of ornithine catabolic process","termid":"GO:1903266"},{"relation_name":"negatively_regulates","term_name":"L-ornithine catabolic process","termid":"GO:0006593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"negative regulation of ornithine catabolic process","synonyms":[{"name":"down regulation of ornithine breakdown","type":"exact"},{"name":"down regulation of ornithine catabolic process","type":"exact"},{"name":"down regulation of ornithine catabolism","type":"exact"},{"name":"down regulation of ornithine degradation","type":"exact"},{"name":"down-regulation of ornithine breakdown","type":"exact"},{"name":"down-regulation of ornithine catabolic process","type":"exact"},{"name":"down-regulation of ornithine catabolism","type":"exact"},{"name":"down-regulation of ornithine degradation","type":"exact"},{"name":"downregulation of ornithine breakdown","type":"exact"},{"name":"downregulation of ornithine catabolic process","type":"exact"},{"name":"downregulation of ornithine catabolism","type":"exact"},{"name":"downregulation of ornithine degradation","type":"exact"},{"name":"inhibition of ornithine breakdown","type":"narrow"},{"name":"inhibition of ornithine catabolic process","type":"narrow"},{"name":"inhibition of ornithine catabolism","type":"narrow"},{"name":"inhibition of ornithine degradation","type":"narrow"},{"name":"negative regulation of ornithine breakdown","type":"exact"},{"name":"negative regulation of ornithine catabolism","type":"exact"},{"name":"negative regulation of ornithine degradation","type":"exact"}],"termid":"GO:1903267"}


id: GO:0015303
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: galactose or glucose(out) = galactose or glucose(in).","definition_xrefs":["TC:2.A.1.1.6"],"gene_count":0,"genotype_count":0,"name":"obsolete galactose, glucose uniporter activity (obsolete GO:0015303)","synonyms":[{"name":"galactose, glucose uniporter activity","type":"exact"}],"termid":"GO:0015303"}


id: MONDO:0003298
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign smooth muscle neoplasm arising from the vulva. It is characterized by the presence of spindle cells with cigar-shaped nuclei, interlacing fascicles, and a whorled pattern.","definition_xrefs":["NCIT:C40326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vulvar benign neoplasm","termid":"MONDO:0000643"},{"relation_name":"is_a","term_name":"leiomyoma","termid":"MONDO:0001572"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vulvar leiomyoma","secondary_identifiers":["UMLS:C1520087","DOID:5142","MEDGEN:274417"],"synonyms":[{"name":"leiomyoma of mammalian vulva","type":"exact"},{"name":"mammalian vulva leiomyoma","type":"exact"},{"name":"vulvar leiomyoma","type":"exact"}],"termid":"MONDO:0003298","xrefs":{"Monarch":{"xref_id":"0003298"}}}


id: PBO:0090430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-coA desaturase","termid":"PBO:0090430"}


id: MONDO:0000717
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acrofrontofacionasal dysostosis (obsolete MONDO:0000717)","termid":"MONDO:0000717","xrefs":{"Monarch":{"xref_id":"0000717"}}}


id: PBO:0090544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER uridine diphosphate-glucose transmembrane transporter Hut1","termid":"PBO:0090544"}


id: GO:0033803
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + kaempferol = S-adenosyl-L-homocysteine + H+ + kaempferide.","definition_xrefs":["RHEA:15105"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"kaempferol 4'-O-methyltransferase activity","secondary_identifiers":["MetaCyc:2.1.1.155-RXN","EC:2.1.1.155","KEGG_REACTION:R06807"],"synonyms":[{"name":"F 4'-OMT","type":"related"},{"name":"S-adenosyl-L-methionine:flavonoid 4'-O-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:kaempferol 4'-O-methyltransferase activity","type":"related"}],"termid":"GO:0033803"}


id: PBO:0054274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1664","termid":"PBO:0054274"}


id: GO:0004888
data:
  {"annotated_genes":["SJAG_01345","SJAG_02258","SJAG_01978","SJAG_01699"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[117397],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990576"},{"annotations":[77127],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004932"},{"annotations":[89958],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036320"},{"annotations":[110289],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140897"}]},"cv_name":"molecular_function","definition":"Combining with an extracellular or intracellular signal and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity or state as part of signal transduction.","definition_xrefs":["GOC:go_curators","Wikipedia:Transmembrane_receptor"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor activity","termid":"GO:0038023"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01345":null,"SJAG_01699":null,"SJAG_01978":null,"SJAG_02258":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"transmembrane signaling receptor activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0004926","Reactome:R-HSA-193672","GO:0099600"],"synonyms":[{"name":"transmembrane receptor activity","type":"broad"},{"name":"transmembrane signalling receptor activity","type":"exact"}],"termid":"GO:0004888","terms_by_termid":{"GO:0004932":null,"GO:0036320":null,"GO:0140897":null,"GO:1990576":null}}


id: PBO:0060156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-RNR2 like 4 (pseudogene)","termid":"PBO:0060156"}


id: PBO:0048596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth hormone inducible transmembrane protein","termid":"PBO:0048596"}


id: MONDO:0006449
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete testicular yolk sac tumor (obsolete MONDO:0006449)","termid":"MONDO:0006449","xrefs":{"Monarch":{"xref_id":"0006449"}}}


id: GO:0042883
data:
  {"annotated_genes":["SJAG_04295"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[64660],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903712"}]},"cv_name":"biological_process","definition":"The directed movement of cysteine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur amino acid transport","termid":"GO:0000101"},{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"neutral amino acid transport","termid":"GO:0015804"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04295":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"cysteine transport","references_by_uniquename":{"GO_REF:0000108":null},"synonyms":[{"name":"L-cysteine transport","type":"narrow"}],"termid":"GO:0042883","terms_by_termid":{"GO:1903712":null}}


id: PBO:0043742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 7A2 like","termid":"PBO:0043742"}


id: PBO:0094073
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"allele_variant","termid":"PBO:0094073"}


id: GO:0002030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that inhibits the signaling function of a G protein-coupled receptor by addition of a phosphate group to its third intracellular loop consensus site.","definition_xrefs":["PMID:8396717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphorylation","termid":"GO:0006468"},{"relation_name":"part_of","term_name":"desensitization of G protein-coupled receptor signaling pathway","termid":"GO:0002029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inhibitory G protein-coupled receptor phosphorylation","synonyms":[{"name":"inhibitory G-protein coupled receptor phosphorylation","type":"exact"}],"termid":"GO:0002030"}


id: GO:0005198
data:
  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id: PR:O74770
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id: GO:0042439
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id: GO:0106059
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id: PBO:0041994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCDC39 antisense RNA 1","termid":"PBO:0041994"}


id: GO:0062048
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A homo- or heterotrimeric protein containing complex consisting of alpha and beta lymphotoxin subunits in different stoichiometric combinations.","definition_xrefs":["PMID:1733951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"lymphotoxin complex","synonyms":[{"name":"lymphotoxin alpha-beta","type":"narrow"}],"termid":"GO:0062048"}


id: GO:0070741
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-6 stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to interleukin-6","synonyms":[{"name":"response to IL-6","type":"exact"}],"termid":"GO:0070741"}


id: PBO:0112489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane protein, palmitoylated, Uvi15","termid":"PBO:0112489"}


id: MONDO:0014242
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any van Maldergem syndrome in which the cause of the disease is a mutation in the FAT4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"van Maldergem syndrome","termid":"MONDO:0017813"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"van Maldergem syndrome 2","secondary_identifiers":["UMLS:C3809875","MEDGEN:816205","GARD:15984","DOID:0080586","OMIM:615546"],"synonyms":[{"name":"FAT4 van Maldergem syndrome","type":"exact"},{"name":"VAN Maldergem syndrome 2","type":"related"},{"name":"VMLDS2","type":"related"},{"name":"Van Maldergem syndrome type 2","type":"exact"},{"name":"van Maldergem syndrome 2","type":"exact"},{"name":"van Maldergem syndrome caused by mutation in FAT4","type":"exact"}],"termid":"MONDO:0014242","xrefs":{"Monarch":{"xref_id":"0014242"}}}


id: PBO:0054701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2110","termid":"PBO:0054701"}


id: PBO:0049264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gasdermin C","termid":"PBO:0049264"}


id: PBO:0031832
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_plasma_membrane_morphology","termid":"PBO:0031832"}


id: PBO:0057118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 203a","termid":"PBO:0057118"}


id: GO:1902787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a dodecane stimulus.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie","GO_REF:0000071","PMID:23826995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to alkane","termid":"GO:1902779"},{"relation_name":"is_a","term_name":"response to dodecane","termid":"GO:1902786"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to dodecane","termid":"GO:1902787"}


id: PBO:0055417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2847","termid":"PBO:0055417"}


id: MONDO:0012450
data:
  {"annotated_genes":["SJAG_01179"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86966],"is_not":false,"summary":null,"term":"MONDO:0012450"}]},"cv_name":"mondo","definition":"Spinocerebellar ataxia type 28 (SCA28) is a very rare subtype of type I autosomal dominant cerebellar ataxia (ADCA type I). It is characterized by juvenile onset, slowly progressive cerebellar ataxia due to Purkinje cell degeneration.","definition_xrefs":["Orphanet:101109"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"},{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia type I","termid":"MONDO:0019792"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01179":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002039","MONDO:0005066","MONDO:0004069","MONDO:0000426"],"is_obsolete":false,"name":"spinocerebellar ataxia type 28","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:9951","UMLS:C1853249","OMIM:610246","DOID:0050977","icd11.foundation:2020736035","SCTID:715824008","MESH:C537205","MEDGEN:339941"],"synonyms":[{"name":"SCA28","type":"exact"},{"name":"spinocerebellar ataxia 28","type":"related"},{"name":"spinocerebellar ataxia type 28","type":"exact"}],"termid":"MONDO:0012450","terms_by_termid":{"MONDO:0012450":null},"xrefs":{"Monarch":{"xref_id":"0012450"}}}


id: PBO:0079565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin associated protein 2 like","termid":"PBO:0079565"}


id: PBO:0078067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 57","termid":"PBO:0078067"}


id: PATO:0000855
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000855 corneal reflex value (obsolete PATO:0000855)","termid":"PATO:0000855"}


id: GO:1903077
data:
  {"annotated_genes":["SJAG_02392","SJAG_03970","SJAG_04597"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97671],"is_not":false,"summary":null,"term":"GO:1903077"},{"annotations":[89903],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042997"},{"annotations":[96222],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140325"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to plasma membrane.","definition_xrefs":["PMID:11602640","GOC:BHF","GO_REF:0000058","GOC:TermGenie","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to plasma membrane","termid":"GO:1903076"},{"relation_name":"is_a","term_name":"negative regulation of protein localization to cell periphery","termid":"GO:1904376"},{"relation_name":"is_a","term_name":"negative regulation of protein localization to membrane","termid":"GO:1905476"},{"relation_name":"negatively_regulates","term_name":"protein localization to plasma membrane","termid":"GO:0072659"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02392":null,"SJAG_03970":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0090005","GO:1905964"],"synonyms":[{"name":"down regulation of protein localisation in plasma membrane","type":"exact"},{"name":"down regulation of protein localization in plasma membrane","type":"exact"},{"name":"down regulation of protein localization to plasma membrane","type":"exact"},{"name":"down regulation of protein targeting to plasma membrane","type":"related"},{"name":"down regulation of protein-plasma membrane targeting","type":"related"},{"name":"down-regulation of protein localisation in plasma membrane","type":"exact"},{"name":"down-regulation of protein localization in plasma membrane","type":"exact"},{"name":"down-regulation of protein localization to plasma membrane","type":"exact"},{"name":"down-regulation of protein targeting to plasma membrane","type":"related"},{"name":"down-regulation of protein-plasma membrane targeting","type":"related"},{"name":"downregulation of protein localisation in plasma membrane","type":"exact"},{"name":"downregulation of protein localization in plasma membrane","type":"exact"},{"name":"downregulation of protein localization to plasma membrane","type":"exact"},{"name":"downregulation of protein targeting to plasma membrane","type":"related"},{"name":"downregulation of protein-plasma membrane targeting","type":"related"},{"name":"inhibition of protein localisation in plasma membrane","type":"narrow"},{"name":"inhibition of protein localization in plasma membrane","type":"narrow"},{"name":"inhibition of protein localization to plasma membrane","type":"narrow"},{"name":"inhibition of protein targeting to plasma membrane","type":"narrow"},{"name":"inhibition of protein-plasma membrane targeting","type":"narrow"},{"name":"negative regulation of establishment of protein localisation in plasma membrane","type":"related"},{"name":"negative regulation of establishment of protein localization in plasma membrane","type":"related"},{"name":"negative regulation of establishment of protein localization to plasma membrane","type":"related"},{"name":"negative regulation of protein localisation in plasma membrane","type":"related"},{"name":"negative regulation of protein localization in plasma membrane","type":"exact"},{"name":"negative regulation of protein targeting to plasma membrane","type":"related"},{"name":"negative regulation of protein-plasma membrane targeting","type":"related"}],"termid":"GO:1903077","terms_by_termid":{"GO:0042997":null,"GO:0140325":null,"GO:1903077":null}}


id: PBO:0059887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 10","termid":"PBO:0059887"}


id: PBO:0089729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol-3-phosphate O-acyltransferase Sct1/Gpt1","termid":"PBO:0089729"}


id: FYPO:0000495
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrial transport is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal mitochondrial transport","synonyms":[{"name":"abnormal mitochondrial transport during mitotic cell cycle","type":"related"},{"name":"abnormal mitochondrial transport during vegetative growth","type":"exact"},{"name":"mitochondrial transport: abnormal","type":"related"}],"termid":"FYPO:0000495"}


id: FYPO:0000428
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the G1 to G0 transition does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal G1 to G0 transition","termid":"FYPO:0000427"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"abolished entry into G0","synonyms":[{"name":"G1/G0 transition abolished","type":"exact"},{"name":"cell cycle quiescence abolished","type":"related"},{"name":"entry into G0 abolished","type":"exact"},{"name":"establishment of cell quiescence abolished","type":"exact"}],"termid":"FYPO:0000428"}


id: PBO:0071043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 45","termid":"PBO:0071043"}


id: MOD:01821
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue sulfhydryl hydrogen with a Thermo Scientific cysTMT6plex reporter+balance group.","definition_xrefs":["URL:http://www.piercenet.com/files/2162220.pdf","Unimod:985"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(13)C isotope tagged reagent","termid":"MOD:01428"},{"relation_name":"is_a","term_name":"(15)N isotope tagged reagent","termid":"MOD:01429"},{"relation_name":"is_a","term_name":"isotope tagged sufhydryl reagent modified cysteine","termid":"MOD:01820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"cysTMT6plex reporter+balance reagent cysteine disulfide","synonyms":[{"name":"S-(2-{3-[2-(2,6-dimethylpiperidin-1-yl)acetamido]propanamido}ethyl)sulfanyl","type":"exact"},{"name":"cysTMT6plex","type":"related"},{"name":"cysteine-reactive Sixplex Tandem Mass Tag(TM)","type":"related"}],"termid":"MOD:01821"}


id: PBO:0072309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S25 pseudogene 6","termid":"PBO:0072309"}


id: GO:0004819
data:
  {"annotated_genes":["SJAG_04482"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[81905],"is_not":false,"summary":null,"term":"GO:0004819"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-glutamine + tRNA(Gln) = AMP + diphosphate + L-glutaminyl-tRNA(Gln).","definition_xrefs":["EC:6.1.1.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04482":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"}],"interesting_parent_ids":["GO:0003674","GO:0140101","GO:0140098","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"glutamine-tRNA ligase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-379982","MetaCyc:GLUTAMINE--TRNA-LIGASE-RXN","RHEA:20121","Reactome:R-HSA-380241"],"synonyms":[{"name":"GlnRS","type":"related"},{"name":"L-glutamine:tRNAGln ligase (AMP-forming)","type":"related"},{"name":"glutamine translase activity","type":"related"},{"name":"glutamine-tRNA synthetase activity","type":"related"},{"name":"glutaminyl ribonucleic acid","type":"related"},{"name":"glutaminyl-tRNA synthetase activity","type":"exact"},{"name":"glutaminyl-transfer RNA synthetase activity","type":"related"},{"name":"glutaminyl-transfer ribonucleate synthetase activity","type":"related"}],"termid":"GO:0004819","terms_by_termid":{"GO:0004819":null}}


id: PBO:0073964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 22 member 13","termid":"PBO:0073964"}


id: PBO:0002235
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.6.1.52","termid":"PBO:0002235"}


id: PBO:0062024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily M member 5","termid":"PBO:0062024"}


id: MONDO:0030508
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 62","secondary_identifiers":["MEDGEN:1794259","DOID:0112351","UMLS:C5562049","OMIM:619673"],"synonyms":[{"name":"SPGF62","type":"exact"}],"termid":"MONDO:0030508","xrefs":{"Monarch":{"xref_id":"0030508"}}}


id: GO:2000918
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glucuronoarabinoxylan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucuronoxylan catabolic process","termid":"GO:2000915"},{"relation_name":"is_a","term_name":"regulation of arabinoxylan-containing compound catabolic process","termid":"GO:2000921"},{"relation_name":"regulates","term_name":"glucuronoarabinoxylan catabolic process","termid":"GO:2000887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of glucuronoarabinoxylan catabolic process","synonyms":[{"name":"regulation of glucuronoarabinoxylan catabolism","type":"exact"}],"termid":"GO:2000918"}


id: PBO:0083045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deoxyhypusine hydroxylase; HEAT-repeat containing metalloenzyme that catalyzes hypusine formation; binds to and is required for the modification of Hyp2p (eIF5A); complements S. pombe mmd1 mutants defective in mitochondrial positioning; protein abundance increases in response to DNA replication stress","termid":"PBO:0083045"}


id: FYECO:0000172
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which zinc ions were added to the assay buffer in excess compared to standard assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ ions","termid":"FYECO:0000030"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ Zn ions","synonyms":[{"name":"zinc ions added","type":"exact"}],"termid":"FYECO:0000172"}


id: GO:0042100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a B cell population by cell division. Follows B cell activation.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell activation","termid":"GO:0042113"},{"relation_name":"is_a","term_name":"lymphocyte proliferation","termid":"GO:0046651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell proliferation","secondary_identifiers":["GO:0042114"],"synonyms":[{"name":"B lymphocyte proliferation","type":"exact"},{"name":"B-cell proliferation","type":"exact"},{"name":"B-lymphocyte proliferation","type":"exact"}],"termid":"GO:0042100"}


id: PBO:0067882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 184","termid":"PBO:0067882"}


id: GO:0047814
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-arabinose + ATP = D-arabinose 5-phosphate + ADP.","definition_xrefs":["EC:2.7.1.54","RHEA:24588"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016301","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"D-arabinokinase activity","secondary_identifiers":["MetaCyc:D-ARABINOKINASE-RXN","KEGG_REACTION:R01573"],"synonyms":[{"name":"ATP:D-arabinose 5-phosphotransferase activity","type":"related"},{"name":"D-arabinokinase (phosphorylating)","type":"related"}],"termid":"GO:0047814"}


id: PBO:0065549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostaglandin E receptor 3","termid":"PBO:0065549"}


id: PR:O74515
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cia1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74515"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone chaperone cia1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC663.05c","synonyms":[{"name":"Spom972h-cia1","type":"exact"},{"name":"anti-silencing function protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74515"}


id: FYPO:0006546
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A localization phenotype observed in the vegetative growth phase of the life cycle in which the distribution of one or more lipids in a cellular membrane is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","GO:0097035"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"regulation phenotype during vegetative growth","termid":"FYPO:0001334"},{"relation_name":"is_a","term_name":"localization phenotype during vegetative growth","termid":"FYPO:0001337"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal membrane lipid distribution","synonyms":[{"name":"normal membrane lipid distribution during mitotic cell cycle","type":"related"},{"name":"normal membrane lipid distribution during vegetative growth","type":"exact"},{"name":"normal regulation of membrane lipid distribution","type":"exact"}],"termid":"FYPO:0006546"}


id: PATO:0000554
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000554 cold sensitive (obsolete PATO:0000554)","termid":"PATO:0000554"}


id: GO:0032233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the assembly of actin filament bundles.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin filament bundle assembly","termid":"GO:0032231"},{"relation_name":"is_a","term_name":"positive regulation of cellular component biogenesis","termid":"GO:0044089"},{"relation_name":"is_a","term_name":"positive regulation of cytoskeleton organization","termid":"GO:0051495"},{"relation_name":"is_a","term_name":"positive regulation of supramolecular fiber organization","termid":"GO:1902905"},{"relation_name":"positively_regulates","term_name":"actin filament bundle assembly","termid":"GO:0051017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0044085","GO:0030036"],"is_obsolete":false,"name":"positive regulation of actin filament bundle assembly","synonyms":[{"name":"activation of actin filament bundle formation","type":"narrow"},{"name":"stimulation of actin filament bundle formation","type":"narrow"},{"name":"up regulation of actin filament bundle formation","type":"exact"},{"name":"up-regulation of actin filament bundle formation","type":"exact"},{"name":"upregulation of actin filament bundle formation","type":"exact"}],"termid":"GO:0032233"}


