# genes

id: SJAG_00279
data:
  {"coiled_coil_coords":[{"range":{"end":691,"start":671}},{"range":{"end":727,"start":700}},{"range":{"end":1338,"start":1318}},{"range":{"end":1448,"start":1424}}],"cv_annotations":{"biological_process":[{"annotations":[77311],"is_not":false,"summary":null,"term":"GO:0051017"},{"annotations":[94138],"is_not":false,"summary":null,"term":"GO:0051016"},{"annotations":[77310],"is_not":false,"summary":null,"term":"GO:1903475"},{"annotations":[94140],"is_not":false,"summary":null,"term":"GO:1904498"}],"cellular_component":[{"annotations":[77309],"is_not":false,"summary":null,"term":"GO:0043332"},{"annotations":[94133],"is_not":false,"summary":null,"term":"GO:0071341"},{"annotations":[94135],"is_not":false,"summary":null,"term":"GO:0120104"}],"molecular_function":[{"annotations":[77312],"is_not":false,"summary":null,"term":"GO:0051015"},{"annotations":[64854],"is_not":false,"summary":null,"term":"GO:0031267"}],"mondo":[{"annotations":[87123],"is_not":false,"summary":null,"term":"MONDO:0007424"},{"annotations":[87789],"is_not":false,"summary":null,"term":"MONDO:0014714"}]},"dbxrefs":["InterPro:IPR010472","EnsemblGenomes-Gn:SJAG_00279","InterPro:IPR015425","InterPro:IPR016024","EnsemblGenomes-Tr:EEB05275","InterPro:IPR010473","UniProtKB/TrEMBL:B6JV74","InterPro:IPR042201","GOA:B6JV74","InterPro:IPR014768","InterPro:IPR011989"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":229,"start":1}},{"range":{"end":910,"start":888}},{"range":{"end":1031,"start":923}},{"range":{"end":1552,"start":1489}},{"range":{"end":1628,"start":1567}},{"range":{"end":1731,"start":1650}},{"range":{"end":1863,"start":1764}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rcd1","uniquename":"SJAG_00285"},{"name":"sec16","uniquename":"SJAG_00284"},{"name":"snz1","uniquename":"SJAG_00283"},{"name":"gor2","uniquename":"SJAG_00281"},{"name":"mso1","uniquename":"SJAG_00280"},{"name":"cdc12","uniquename":"SJAG_00279"},{"name":"lin1","uniquename":"SJAG_00278"},{"name":"emc7","uniquename":"SJAG_00277"},{"name":"pet2","uniquename":"SJAG_00276"},{"name":"yhm2","uniquename":"SJAG_00275"},{"uniquename":"SJAG_00273"}],"genes_by_uniquename":{"HGNC:2876":null,"SJAG_00279":null,"SPAC1F5.04c":null,"YIL159W":null,"YNL271C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Diaphanous FH3 Domain","id":"PF06367","interpro_description":"Formin, FH3 domain","interpro_id":"IPR010472","interpro_name":"FH3_dom","locations":[{"end":656,"start":500}],"match_end":656,"match_start":500,"name":"Drf_FH3"},{"dbname":"PFAM","description":"Formin Homology 2 Domain","id":"PF02181","interpro_description":"Formin, FH2 domain","interpro_id":"IPR015425","interpro_name":"FH2_Formin","locations":[{"end":1424,"start":1042}],"match_end":1424,"match_start":1042,"name":"FH2"},{"dbname":"PFAM","description":"Diaphanous GTPase-binding Domain","id":"PF06371","interpro_description":"Formin, GTPase-binding domain","interpro_id":"IPR010473","interpro_name":"GTPase-bd","locations":[{"end":441,"start":267}],"match_end":441,"match_start":267,"name":"Drf_GBD"},{"dbname":"PROSITE_PROFILES","description":"Phosphatidylinositol-specific phospholipase X-box domain profile.","id":"PS50007","locations":[{"end":1358,"start":1327}],"match_end":1358,"match_start":1327,"name":"PIPLC_X_DOMAIN"},{"dbname":"PROSITE_PROFILES","description":"Formin homology-2 (FH2) domain profile.","id":"PS51444","interpro_description":"Formin, FH2 domain","interpro_id":"IPR015425","interpro_name":"FH2_Formin","locations":[{"end":1449,"start":1038}],"match_end":1449,"match_start":1038,"name":"FH2"},{"dbname":"PROSITE_PROFILES","description":"Rho GTPase-binding/formin homology 3 (GBD/FH3) domain profile.","id":"PS51232","interpro_description":"Rho GTPase-binding/formin homology 3 (GBD/FH3) domain","interpro_id":"IPR014768","interpro_name":"GBD/FH3_dom","locations":[{"end":647,"start":262}],"match_end":647,"match_start":262,"name":"GBD_FH3"},{"dbname":"SMART","id":"SM00498","interpro_description":"Formin, FH2 domain","interpro_id":"IPR015425","interpro_name":"FH2_Formin","locations":[{"end":1506,"start":1038}],"match_end":1506,"match_start":1038,"name":"it6_source"},{"dbname":"SMART","id":"SM01139","interpro_description":"Formin, FH3 domain","interpro_id":"IPR010472","interpro_name":"FH3_dom","locations":[{"end":663,"start":447}],"match_end":663,"match_start":447,"name":"Drf_FH3_2"},{"dbname":"SMART","id":"SM01140","interpro_description":"Formin, GTPase-binding domain","interpro_id":"IPR010473","interpro_name":"GTPase-bd","locations":[{"end":442,"start":261}],"match_end":442,"match_start":261,"name":"Drf_GBD_2"},{"dbname":"SUPERFAMILY","id":"SSF101447","locations":[{"end":1440,"start":1051}],"match_end":1440,"match_start":1051,"name":"Formin homology 2 domain (FH2 domain)"},{"dbname":"SUPERFAMILY","id":"SSF48371","interpro_description":"Armadillo-type fold","interpro_id":"IPR016024","interpro_name":"ARM-type_fold","locations":[{"end":679,"start":328}],"match_end":679,"match_start":328,"name":"ARM repeat"},{"dbname":"GENE3D","id":"G3DSA:6.10.30.50","locations":[{"end":1102,"start":1041}],"match_end":1102,"match_start":1041},{"dbname":"GENE3D","id":"G3DSA:1.20.58.2220","interpro_description":"Formin, FH2 domain superfamily","interpro_id":"IPR042201","interpro_name":"FH2_Formin_sf","locations":[{"end":1453,"start":1103}],"match_end":1453,"match_start":1103,"name":"Formin, FH2 domain"},{"dbname":"GENE3D","id":"G3DSA:1.25.10.10","interpro_description":"Armadillo-like helical","interpro_id":"IPR011989","interpro_name":"ARM-like","locations":[{"end":576,"start":326}],"match_end":576,"match_start":326},{"dbname":"PANTHER","id":"PTHR47102","interpro_description":"Actin filament dynamics regulator","interpro_id":"IPR051661","interpro_name":"Actin_filament_regulator","locations":[{"end":1779,"start":178}],"match_end":1779,"match_start":178,"name":"PROTEIN BNI1"},{"dbname":"COILS","id":"Coil","locations":[{"end":691,"start":671},{"end":727,"start":700},{"end":1338,"start":1318},{"end":1448,"start":1424}],"match_end":1448,"match_start":671,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":229,"start":1},{"end":910,"start":888},{"end":1031,"start":923},{"end":1552,"start":1489},{"end":1628,"start":1567},{"end":1731,"start":1650},{"end":1863,"start":1764}],"match_end":1863,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":1689,"start":1675}],"match_end":1689,"match_start":1675,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":56,"start":45},{"end":164,"start":155},{"end":209,"start":192},{"end":948,"start":939},{"end":995,"start":985},{"end":1722,"start":1703},{"end":1778,"start":1767},{"end":1802,"start":1790}],"match_end":1802,"match_start":45,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":1524,"start":1495},{"end":1580,"start":1568},{"end":1669,"start":1652}],"match_end":1669,"match_start":1495,"name":"disorder_prediction"},{"dbname":"MOBIDB-Proline-rich","description":"consensus disorder prediction","id":"mobidb-lite-Proline-rich","locations":[{"end":977,"start":967},{"end":1010,"start":999}],"match_end":1010,"match_start":967,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3677093,"start_pos":3671360,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":111,"start":97}},{"range":{"end":255,"start":239}},{"range":{"end":501,"start":486}},{"range":{"end":591,"start":580}},{"range":{"end":901,"start":891}},{"range":{"end":976,"start":966}},{"range":{"end":1009,"start":999}},{"range":{"end":1040,"start":1026}},{"range":{"end":1522,"start":1505}},{"range":{"end":1554,"start":1529}},{"range":{"end":1688,"start":1674}}],"name":"cdc12","ortholog_annotations":[{"gene_uniquename":"SJAG_00279","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:2876","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00279","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1F5.04c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00279","ortholog_taxonid":4932,"ortholog_uniquename":"YIL159W","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_00279","ortholog_taxonid":4932,"ortholog_uniquename":"YNL271C","reference_uniquename":"PMID:29761456"}],"product":"cytokinetic formin Cdc12","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0051015","GO:0031267"]}},"subset_termids":["GO:0065003","MONDO:0019497","GO:0070938","GO:0030036","MONDO:0000426","GO:0003779","GO:0000281","GO:0015629","GO:0005938"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0031267":null,"GO:0043332":null,"GO:0051015":null,"GO:0051016":null,"GO:0051017":null,"GO:0071341":null,"GO:0120104":null,"GO:1903475":null,"GO:1904498":null,"MONDO:0007424":null,"MONDO:0014714":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00279.1"],"transcripts_by_uniquename":{"SJAG_00279.1":null},"uniprot_identifier":"B6JV74","uniquename":"SJAG_00279"}


id: SJAG_00280
data:
  {"cv_annotations":{"biological_process":[{"annotations":[94145],"is_not":false,"summary":null,"term":"GO:0006904"}],"cellular_component":[{"annotations":[94141],"is_not":false,"summary":null,"term":"GO:0032153"},{"annotations":[94142],"is_not":false,"summary":null,"term":"GO:0051286"},{"annotations":[94143],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[94144],"is_not":false,"summary":null,"term":"GO:0005634"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JV75","EnsemblGenomes-Gn:SJAG_00280","EnsemblGenomes-Tr:EEB05276"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":26,"start":1}},{"range":{"end":114,"start":69}},{"range":{"end":158,"start":126}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mtq1","uniquename":"SJAG_00286"},{"name":"rcd1","uniquename":"SJAG_00285"},{"name":"sec16","uniquename":"SJAG_00284"},{"name":"snz1","uniquename":"SJAG_00283"},{"name":"gor2","uniquename":"SJAG_00281"},{"name":"mso1","uniquename":"SJAG_00280"},{"name":"cdc12","uniquename":"SJAG_00279"},{"name":"lin1","uniquename":"SJAG_00278"},{"name":"emc7","uniquename":"SJAG_00277"},{"name":"pet2","uniquename":"SJAG_00276"},{"name":"yhm2","uniquename":"SJAG_00275"}],"genes_by_uniquename":{"SJAG_00280":null,"SPAC1F5.05c":null,"YNR049C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Sec1-binding region of Mso1","id":"PF14475","interpro_description":"Mso1, N-terminal domain","interpro_id":"IPR028095","interpro_name":"Mso1_N_dom","locations":[{"end":47,"start":19}],"match_end":47,"match_start":19,"name":"Mso1_Sec1_bdg"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":26,"start":1},{"end":114,"start":69},{"end":158,"start":126}],"match_end":158,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":98,"start":76},{"end":158,"start":133}],"match_end":158,"match_start":76,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":12,"start":1}],"match_end":12,"match_start":1,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3670928,"start_pos":3670452,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":112,"start":75}},{"range":{"end":155,"start":127}}],"name":"mso1","ortholog_annotations":[{"gene_uniquename":"SJAG_00280","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1F5.05c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00280","ortholog_taxonid":4932,"ortholog_uniquename":"YNR049C","reference_uniquename":"PMID:29761456"}],"product":"exocytic docking protein Mso1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0016192","GO:0005634","GO:0140056","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null,"GO:0006904":null,"GO:0032153":null,"GO:0051286":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00280.1"],"transcripts_by_uniquename":{"SJAG_00280.1":null},"uniprot_identifier":"B6JV75","uniquename":"SJAG_00280"}


id: SJAG_00281
data:
  {"cv_annotations":{"biological_process":[{"annotations":[106921],"is_not":false,"summary":null,"term":"GO:0009436"}],"cellular_component":[{"annotations":[76892],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[106919],"is_not":false,"summary":null,"term":"GO:0005739"},{"annotations":[106920],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[76893],"is_not":false,"summary":null,"term":"GO:0030267"},{"annotations":[76891],"is_not":false,"summary":null,"term":"GO:0016618"},{"annotations":[64266],"is_not":false,"summary":null,"term":"GO:0051287"}],"mondo":[{"annotations":[87447],"is_not":false,"summary":null,"term":"MONDO:0009824"}]},"dbxrefs":["InterPro:IPR006140","InterPro:IPR036291","EnsemblGenomes-Tr:EEB05277","InterPro:IPR006139","UniProtKB/TrEMBL:B6JV76","GOA:B6JV76","EnsemblGenomes-Gn:SJAG_00281","InterPro:IPR029753"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_00287"},{"name":"mtq1","uniquename":"SJAG_00286"},{"name":"rcd1","uniquename":"SJAG_00285"},{"name":"sec16","uniquename":"SJAG_00284"},{"name":"snz1","uniquename":"SJAG_00283"},{"name":"gor2","uniquename":"SJAG_00281"},{"name":"mso1","uniquename":"SJAG_00280"},{"name":"cdc12","uniquename":"SJAG_00279"},{"name":"lin1","uniquename":"SJAG_00278"},{"name":"emc7","uniquename":"SJAG_00277"},{"name":"pet2","uniquename":"SJAG_00276"}],"genes_by_uniquename":{"HGNC:4570":null,"SJAG_00281":null,"SPBC1773.17c":null,"YNL274C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain","id":"PF00389","interpro_description":"D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain","interpro_id":"IPR006139","interpro_name":"D-isomer_2_OHA_DH_cat_dom","locations":[{"end":129,"start":44},{"end":341,"start":310}],"match_end":341,"match_start":44,"name":"2-Hacid_dh"},{"dbname":"PFAM","description":"D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain","id":"PF02826","interpro_description":"D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain","interpro_id":"IPR006140","interpro_name":"D-isomer_DH_NAD-bd","locations":[{"end":309,"start":130}],"match_end":309,"match_start":130,"name":"2-Hacid_dh_C"},{"dbname":"CDD","description":"Mand_dh_like","id":"cd12168","locations":[{"end":337,"start":7}],"match_end":337,"match_start":7,"name":"Mand_dh_like"},{"dbname":"PROSITE_PATTERNS","description":"D-isomer specific 2-hydroxyacid dehydrogenases signature 3.","id":"PS00671","interpro_description":"D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site","interpro_id":"IPR029753","interpro_name":"D-isomer_DH_CS","locations":[{"end":263,"start":247}],"match_end":263,"match_start":247,"name":"D_2_HYDROXYACID_DH_3"},{"dbname":"PROSITE_PATTERNS","description":"D-isomer specific 2-hydroxyacid dehydrogenases signature 2.","id":"PS00670","interpro_description":"D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site","interpro_id":"IPR029753","interpro_name":"D-isomer_DH_CS","locations":[{"end":240,"start":218}],"match_end":240,"match_start":218,"name":"D_2_HYDROXYACID_DH_2"},{"dbname":"SUPERFAMILY","id":"SSF52283","locations":[{"end":154,"start":8}],"match_end":154,"match_start":8,"name":"Formate/glycerate dehydrogenase catalytic domain-like"},{"dbname":"SUPERFAMILY","id":"SSF51735","interpro_description":"NAD(P)-binding domain superfamily","interpro_id":"IPR036291","interpro_name":"NAD(P)-bd_dom_sf","locations":[{"end":310,"start":128}],"match_end":310,"match_start":128,"name":"NAD(P)-binding Rossmann-fold domains"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.720","locations":[{"end":337,"start":7}],"match_end":337,"match_start":7},{"dbname":"PANTHER","id":"PTHR10996","interpro_description":"D-isomer specific 2-hydroxyacid dehydrogenase","interpro_id":"IPR050223","interpro_name":"D-isomer_2-hydroxyacid_DH","locations":[{"end":339,"start":47}],"match_end":339,"match_start":47,"name":"2-HYDROXYACID DEHYDROGENASE-RELATED"}],"location":{"chromosome_name":"supercont5.1","end_pos":3669786,"start_pos":3668746,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":294,"start":282}}],"name":"gor2","ortholog_annotations":[{"gene_uniquename":"SJAG_00281","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4570","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00281","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1773.17c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00281","ortholog_taxonid":4932,"ortholog_uniquename":"YNL274C","reference_uniquename":"PMID:29761456"}],"product":"glyoxylate reductase","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0051287"],"not-binding":["GO:0030267","GO:0016618"]}},"subset_termids":["GO:0016491","GO:0005634","MONDO:0037792","MONDO:0005066","GO:0005829","GO:0005739"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005739":null,"GO:0005829":null,"GO:0009436":null,"GO:0016618":null,"GO:0030267":null,"GO:0051287":null,"MONDO:0009824":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00281.1"],"transcripts_by_uniquename":{"SJAG_00281.1":null},"uniprot_identifier":"B6JV76","uniquename":"SJAG_00281"}


id: SJAG_00283
data:
  {"active_sites":[{"assigned_by":"UniProtKB","range":{"end":85,"start":85}}],"binding_sites":[{"assigned_by":"UniProtKB","ligand":"D-ribose 5-phosphate","range":{"end":28,"start":28}},{"assigned_by":"UniProtKB","ligand":"D-ribose 5-phosphate","range":{"end":157,"start":157}},{"assigned_by":"UniProtKB","ligand":"D-glyceraldehyde 3-phosphate","range":{"end":169,"start":169}},{"assigned_by":"UniProtKB","ligand":"D-ribose 5-phosphate","range":{"end":218,"start":218}},{"assigned_by":"UniProtKB","ligand":"D-ribose 5-phosphate","range":{"end":240,"start":239}}],"cv_annotations":{"biological_process":[{"annotations":[77333],"is_not":false,"summary":null,"term":"GO:0006520"},{"annotations":[77332],"is_not":false,"summary":null,"term":"GO:0042823"},{"annotations":[77334],"is_not":false,"summary":null,"term":"GO:0008615"}],"cellular_component":[{"annotations":[97309],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[97310],"is_not":false,"summary":null,"term":"GO:1903600"}],"molecular_function":[{"annotations":[64878],"is_not":false,"summary":null,"term":"GO:0036381"}]},"dbxrefs":["InterPro:IPR033755","GOA:B6JV77","UniProtKB/TrEMBL:B6JV77","EnsemblGenomes-Tr:EEB05278","InterPro:IPR011060","EnsemblGenomes-Gn:SJAG_00283","InterPro:IPR013785","InterPro:IPR001852"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pdi1","uniquename":"SJAG_00288"},{"uniquename":"SJAG_00287"},{"name":"mtq1","uniquename":"SJAG_00286"},{"name":"rcd1","uniquename":"SJAG_00285"},{"name":"sec16","uniquename":"SJAG_00284"},{"name":"snz1","uniquename":"SJAG_00283"},{"name":"gor2","uniquename":"SJAG_00281"},{"name":"mso1","uniquename":"SJAG_00280"},{"name":"cdc12","uniquename":"SJAG_00279"},{"name":"lin1","uniquename":"SJAG_00278"},{"name":"emc7","uniquename":"SJAG_00277"}],"genes_by_uniquename":{"SJAG_00283":null,"SPAC29B12.04":null,"YFL059W":null,"YMR096W":null,"YNL333W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"SOR/SNZ family","id":"PF01680","interpro_description":"PdxS/SNZ N-terminal domain","interpro_id":"IPR033755","interpro_name":"PdxS/SNZ_N","locations":[{"end":216,"start":11}],"match_end":216,"match_start":11,"name":"SOR_SNZ"},{"dbname":"CDD","description":"pdxS","id":"cd04727","interpro_description":"Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ","interpro_id":"IPR001852","interpro_name":"PdxS/SNZ","locations":[{"end":297,"start":16}],"match_end":297,"match_start":16,"name":"pdxS"},{"dbname":"PROSITE_PATTERNS","description":"PdxS/SNZ family signature.","id":"PS01235","interpro_description":"Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ","interpro_id":"IPR001852","interpro_name":"PdxS/SNZ","locations":[{"end":227,"start":209}],"match_end":227,"match_start":209,"name":"PDXS_SNZ_1"},{"dbname":"PROSITE_PROFILES","description":"PdxS/SNZ family profile.","id":"PS51129","interpro_description":"Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ","interpro_id":"IPR001852","interpro_name":"PdxS/SNZ","locations":[{"end":298,"start":13}],"match_end":298,"match_start":13,"name":"PDXS_SNZ_2"},{"dbname":"FUNFAM","description":"Pyridoxine biosynthesis protein PDX1","id":"G3DSA:3.20.20.70:FF:000001","locations":[{"end":297,"start":4}],"match_end":297,"match_start":4},{"dbname":"SUPERFAMILY","id":"SSF51366","interpro_description":"Ribulose-phosphate binding barrel","interpro_id":"IPR011060","interpro_name":"RibuloseP-bd_barrel","locations":[{"end":271,"start":22}],"match_end":271,"match_start":22,"name":"Ribulose-phoshate binding barrel"},{"dbname":"GENE3D","id":"G3DSA:3.20.20.70","interpro_description":"Aldolase-type TIM barrel","interpro_id":"IPR013785","interpro_name":"Aldolase_TIM","locations":[{"end":297,"start":2}],"match_end":297,"match_start":2,"name":"Aldolase class I"},{"dbname":"PANTHER","id":"PTHR31829","interpro_description":"Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ","interpro_id":"IPR001852","interpro_name":"PdxS/SNZ","locations":[{"end":289,"start":4}],"match_end":289,"match_start":4,"name":"PYRIDOXAL 5'-PHOSPHATE SYNTHASE SUBUNIT SNZ1-RELATED"},{"dbname":"PIRSF","id":"PIRSF029271","interpro_description":"Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ","interpro_id":"IPR001852","interpro_name":"PdxS/SNZ","locations":[{"end":298,"start":1}],"match_end":298,"match_start":1,"name":"Pdx1"},{"dbname":"HAMAP","description":"Pyridoxal 5'-phosphate synthase subunit PdxS [pdxS].","id":"MF_01824","interpro_description":"Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ","interpro_id":"IPR001852","interpro_name":"PdxS/SNZ","locations":[{"end":298,"start":8}],"match_end":298,"match_start":8,"name":"PdxS"},{"dbname":"NCBIFAM","description":"pyridoxal 5'-phosphate synthase lyase subunit PdxS","id":"TIGR00343","interpro_description":"Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ","interpro_id":"IPR001852","interpro_name":"PdxS/SNZ","locations":[{"end":298,"start":13}],"match_end":298,"match_start":13,"name":"TIGR00343"},{"dbname":"NCBIFAM","description":"pyridoxal 5'-phosphate synthase lyase subunit PdxS","id":"NF003215","locations":[{"end":298,"start":4}],"match_end":298,"match_start":4,"name":"PRK04180.1"}],"location":{"chromosome_name":"supercont5.1","end_pos":3667577,"start_pos":3666681,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":225,"start":214}}],"name":"snz1","ortholog_annotations":[{"gene_uniquename":"SJAG_00283","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC29B12.04","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00283","ortholog_taxonid":4932,"ortholog_uniquename":"YFL059W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00283","ortholog_taxonid":4932,"ortholog_uniquename":"YFL059W","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_00283","ortholog_taxonid":4932,"ortholog_uniquename":"YMR096W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00283","ortholog_taxonid":4932,"ortholog_uniquename":"YMR096W","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_00283","ortholog_taxonid":4932,"ortholog_uniquename":"YNL333W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00283","ortholog_taxonid":4932,"ortholog_uniquename":"YNL333W","reference_uniquename":"PMID:26896847"}],"product":"pyridoxal 5'-phosphate synthase (glutamine hydrolysing)","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0036381"]}},"subset_termids":["GO:0006766","GO:0016829","GO:0005829","GO:0006520"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005829":null,"GO:0006520":null,"GO:0008615":null,"GO:0036381":null,"GO:0042823":null,"GO:1903600":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00283.1"],"transcripts_by_uniquename":{"SJAG_00283.1":null},"uniprot_identifier":"B6JV77","uniquename":"SJAG_00283"}


id: SJAG_00284
data:
  {"coiled_coil_coords":[{"range":{"end":1936,"start":1906}}],"cv_annotations":{"biological_process":[{"annotations":[97331],"is_not":false,"summary":null,"term":"GO:0006914"},{"annotations":[79936],"is_not":false,"summary":null,"term":"GO:0007030"},{"annotations":[97333],"is_not":false,"summary":null,"term":"GO:0006886"},{"annotations":[79937],"is_not":false,"summary":null,"term":"GO:0070973"},{"annotations":[97335],"is_not":false,"summary":null,"term":"GO:0006901"}],"cellular_component":[{"annotations":[97327],"is_not":false,"summary":null,"term":"GO:0030127"},{"annotations":[79934],"is_not":false,"summary":null,"term":"GO:0070971"},{"annotations":[97330],"is_not":false,"summary":null,"term":"GO:0005789"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB05279","GOA:B6JV78","EnsemblGenomes-Gn:SJAG_00284","InterPro:IPR024880","UniProtKB/TrEMBL:B6JV78","InterPro:IPR024298","InterPro:IPR024340"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":61,"start":1}},{"range":{"end":231,"start":206}},{"range":{"end":336,"start":254}},{"range":{"end":510,"start":358}},{"range":{"end":649,"start":528}},{"range":{"end":712,"start":686}},{"range":{"end":856,"start":736}},{"range":{"end":915,"start":887}},{"range":{"end":964,"start":929}},{"range":{"end":1771,"start":1747}},{"range":{"end":1882,"start":1808}},{"range":{"end":2138,"start":1921}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_00289"},{"name":"pdi1","uniquename":"SJAG_00288"},{"uniquename":"SJAG_00287"},{"name":"mtq1","uniquename":"SJAG_00286"},{"name":"rcd1","uniquename":"SJAG_00285"},{"name":"sec16","uniquename":"SJAG_00284"},{"name":"snz1","uniquename":"SJAG_00283"},{"name":"gor2","uniquename":"SJAG_00281"},{"name":"mso1","uniquename":"SJAG_00280"},{"name":"cdc12","uniquename":"SJAG_00279"},{"name":"lin1","uniquename":"SJAG_00278"}],"genes_by_uniquename":{"HGNC:29006":null,"HGNC:30301":null,"SJAG_00284":null,"SPAC29B12.07":null,"YPL085W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Sec16 Sec23-binding domain","id":"PF12931","interpro_description":"Sec16, Sec23-binding domain","interpro_id":"IPR024298","interpro_name":"Sec16_Sec23-bd","locations":[{"end":1655,"start":1351}],"match_end":1655,"match_start":1351,"name":"TPR_Sec16"},{"dbname":"PFAM","description":"Vesicle coat trafficking protein Sec16 mid-region","id":"PF12932","interpro_description":"Sec16, central conserved domain","interpro_id":"IPR024340","interpro_name":"Sec16_CCD","locations":[{"end":1276,"start":1185}],"match_end":1276,"match_start":1185,"name":"Sec16"},{"dbname":"CDD","description":"ACE1-Sec16-like","id":"cd09233","locations":[{"end":1617,"start":1240}],"match_end":1617,"match_start":1240,"name":"ACE1-Sec16-like"},{"dbname":"GENE3D","id":"G3DSA:1.25.40.1030","locations":[{"end":1595,"start":1183}],"match_end":1595,"match_start":1183},{"dbname":"PANTHER","id":"PTHR13402","locations":[{"end":2059,"start":909}],"match_end":2059,"match_start":909,"name":"RGPR-RELATED"},{"dbname":"COILS","id":"Coil","locations":[{"end":1936,"start":1906}],"match_end":1936,"match_start":1906,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":61,"start":1},{"end":231,"start":206},{"end":336,"start":254},{"end":510,"start":358},{"end":649,"start":528},{"end":712,"start":686},{"end":856,"start":736},{"end":915,"start":887},{"end":964,"start":929},{"end":1771,"start":1747},{"end":1882,"start":1808},{"end":2138,"start":1921}],"match_end":2138,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":914,"start":891},{"end":2048,"start":2033},{"end":2072,"start":2063},{"end":2102,"start":2086}],"match_end":2102,"match_start":891,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":333,"start":321},{"end":411,"start":400},{"end":451,"start":439},{"end":491,"start":468},{"end":618,"start":556},{"end":712,"start":703},{"end":809,"start":790},{"end":835,"start":815},{"end":941,"start":930},{"end":1882,"start":1858}],"match_end":1882,"match_start":321,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":222,"start":207},{"end":317,"start":303},{"end":1930,"start":1921},{"end":1986,"start":1968}],"match_end":1986,"match_start":207,"name":"disorder_prediction"},{"dbname":"MOBIDB-Proline-rich","description":"consensus disorder prediction","id":"mobidb-lite-Proline-rich","locations":[{"end":773,"start":763},{"end":2085,"start":2073}],"match_end":2085,"match_start":763,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3666224,"start_pos":3659808,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":181,"start":170}},{"range":{"end":288,"start":279}},{"range":{"end":781,"start":758}},{"range":{"end":913,"start":890}},{"range":{"end":1438,"start":1427}},{"range":{"end":1625,"start":1614}},{"range":{"end":1841,"start":1826}},{"range":{"end":1937,"start":1913}},{"range":{"end":2008,"start":1997}},{"range":{"end":2047,"start":2032}},{"range":{"end":2098,"start":2052}},{"range":{"end":2111,"start":2100}}],"name":"sec16","ortholog_annotations":[{"gene_uniquename":"SJAG_00284","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:29006","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00284","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:30301","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00284","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC29B12.07","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00284","ortholog_taxonid":4932,"ortholog_uniquename":"YPL085W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00284","ortholog_taxonid":4932,"ortholog_uniquename":"YPL085W","reference_uniquename":"PMID:26896847"}],"product":"multidomain vesicle coat component Sec16","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0061024","GO:0016192","GO:0006914","GO:0031410","GO:0005789","GO:0005783"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005789":null,"GO:0006886":null,"GO:0006901":null,"GO:0006914":null,"GO:0007030":null,"GO:0030127":null,"GO:0070971":null,"GO:0070973":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00284.1"],"transcripts_by_uniquename":{"SJAG_00284.1":null},"uniprot_identifier":"B6JV78","uniquename":"SJAG_00284"}


id: SJAG_00285
data:
  {"cv_annotations":{"biological_process":[{"annotations":[97325],"is_not":false,"summary":null,"term":"GO:0000289"}],"cellular_component":[{"annotations":[71694],"is_not":false,"summary":null,"term":"GO:0030015"},{"annotations":[97322],"is_not":false,"summary":null,"term":"GO:0033620"},{"annotations":[71693],"is_not":false,"summary":null,"term":"GO:0000932"}],"molecular_function":[{"annotations":[97326],"is_not":false,"summary":null,"term":"GO:0003723"}]},"dbxrefs":["InterPro:IPR011989","EnsemblGenomes-Tr:EEB05280","GOA:B6JV79","InterPro:IPR016024","EnsemblGenomes-Gn:SJAG_00285","InterPro:IPR007216","UniProtKB/TrEMBL:B6JV79"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"tup11","uniquename":"SJAG_00290"},{"uniquename":"SJAG_00289"},{"name":"pdi1","uniquename":"SJAG_00288"},{"uniquename":"SJAG_00287"},{"name":"mtq1","uniquename":"SJAG_00286"},{"name":"rcd1","uniquename":"SJAG_00285"},{"name":"sec16","uniquename":"SJAG_00284"},{"name":"snz1","uniquename":"SJAG_00283"},{"name":"gor2","uniquename":"SJAG_00281"},{"name":"mso1","uniquename":"SJAG_00280"},{"name":"cdc12","uniquename":"SJAG_00279"}],"genes_by_uniquename":{"HGNC:10445":null,"SJAG_00285":null,"SPAC29B12.06c":null,"YNL288W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Cell differentiation family, Rcd1-like","id":"PF04078","interpro_description":"CCR4-NOT transcription complex subunit 9","interpro_id":"IPR007216","interpro_name":"CNOT9","locations":[{"end":272,"start":14}],"match_end":272,"match_start":14,"name":"Rcd1"},{"dbname":"FUNFAM","description":"Cell differentiation protein RCD1","id":"G3DSA:1.25.10.10:FF:000014","locations":[{"end":275,"start":6}],"match_end":275,"match_start":6},{"dbname":"SUPERFAMILY","id":"SSF48371","interpro_description":"Armadillo-type fold","interpro_id":"IPR016024","interpro_name":"ARM-type_fold","locations":[{"end":273,"start":72}],"match_end":273,"match_start":72,"name":"ARM repeat"},{"dbname":"GENE3D","id":"G3DSA:1.25.10.10","interpro_description":"Armadillo-like helical","interpro_id":"IPR011989","interpro_name":"ARM-like","locations":[{"end":276,"start":8}],"match_end":276,"match_start":8},{"dbname":"PANTHER","id":"PTHR12262","interpro_description":"CCR4-NOT transcription complex subunit 9","interpro_id":"IPR007216","interpro_name":"CNOT9","locations":[{"end":274,"start":3}],"match_end":274,"match_start":3,"name":"CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 9"}],"location":{"chromosome_name":"supercont5.1","end_pos":3658994,"start_pos":3658152,"strand":"reverse"},"name":"rcd1","ortholog_annotations":[{"gene_uniquename":"SJAG_00285","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10445","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00285","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC29B12.06c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00285","ortholog_taxonid":4932,"ortholog_uniquename":"YNL288W","reference_uniquename":"PMID:29761456"}],"product":"CCR4-Not complex RNA-binding protein subunit 9","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003723"]}},"subset_termids":["GO:0016071","GO:0000932","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000289":null,"GO:0000932":null,"GO:0003723":null,"GO:0030015":null,"GO:0033620":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00285.1"],"transcripts_by_uniquename":{"SJAG_00285.1":null},"uniprot_identifier":"B6JV79","uniquename":"SJAG_00285"}


id: SJAG_00286
data:
  {"chains":[{"assigned_by":"UniProtKB","range":{"end":303,"start":26}}],"cv_annotations":{"biological_process":[{"annotations":[97317],"is_not":false,"summary":null,"term":"GO:0070126"}],"cellular_component":[{"annotations":[97316],"is_not":false,"summary":null,"term":"GO:0005759"}],"molecular_function":[{"annotations":[97318],"is_not":false,"summary":null,"term":"GO:0102559"}],"sequence":[{"annotations":[82423],"is_not":false,"summary":null,"term":"SO:0000418"}]},"dbxrefs":["InterPro:IPR002052","UniProtKB/TrEMBL:B6JV80","EnsemblGenomes-Tr:EEB05281","InterPro:IPR004556","GOA:B6JV80","InterPro:IPR007848","EnsemblGenomes-Gn:SJAG_00286","InterPro:IPR029063"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_05413"},{"name":"tup11","uniquename":"SJAG_00290"},{"uniquename":"SJAG_00289"},{"name":"pdi1","uniquename":"SJAG_00288"},{"uniquename":"SJAG_00287"},{"name":"mtq1","uniquename":"SJAG_00286"},{"name":"rcd1","uniquename":"SJAG_00285"},{"name":"sec16","uniquename":"SJAG_00284"},{"name":"snz1","uniquename":"SJAG_00283"},{"name":"gor2","uniquename":"SJAG_00281"},{"name":"mso1","uniquename":"SJAG_00280"}],"genes_by_uniquename":{"HGNC:24923":null,"SJAG_00286":null,"SPAC29B12.05c":null,"YNL063W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Methyltransferase small domain","id":"PF05175","interpro_description":"Methyltransferase small domain","interpro_id":"IPR007848","interpro_name":"Small_mtfrase_dom","locations":[{"end":201,"start":115}],"match_end":201,"match_start":115,"name":"MTS"},{"dbname":"CDD","description":"AdoMet_MTases","id":"cd02440","locations":[{"end":204,"start":116}],"match_end":204,"match_start":116,"name":"AdoMet_MTases"},{"dbname":"PROSITE_PATTERNS","description":"N-6 Adenine-specific DNA methylases signature.","id":"PS00092","interpro_description":"DNA methylase, N-6 adenine-specific, conserved site","interpro_id":"IPR002052","interpro_name":"DNA_methylase_N6_adenine_CS","locations":[{"end":196,"start":190}],"match_end":196,"match_start":190,"name":"N6_MTASE"},{"dbname":"SUPERFAMILY","id":"SSF53335","interpro_description":"S-adenosyl-L-methionine-dependent methyltransferase superfamily","interpro_id":"IPR029063","interpro_name":"SAM-dependent_MTases_sf","locations":[{"end":238,"start":58}],"match_end":238,"match_start":58,"name":"S-adenosyl-L-methionine-dependent methyltransferases"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.150","interpro_description":"S-adenosyl-L-methionine-dependent methyltransferase superfamily","interpro_id":"IPR029063","interpro_name":"SAM-dependent_MTases_sf","locations":[{"end":297,"start":76}],"match_end":297,"match_start":76,"name":"Vaccinia Virus protein VP39"},{"dbname":"PANTHER","id":"PTHR18895","interpro_description":"Protein N5-glutamine methyltransferase","interpro_id":"IPR050320","interpro_name":"N5-glutamine_MTase","locations":[{"end":288,"start":9}],"match_end":288,"match_start":9,"name":"HEMK METHYLTRANSFERASE"},{"dbname":"NCBIFAM","description":"HemK family protein methyltransferase","id":"TIGR00536","interpro_description":"Methyltransferase HemK-like","interpro_id":"IPR004556","interpro_name":"HemK-like","locations":[{"end":284,"start":16}],"match_end":284,"match_start":16,"name":"hemK_fam"}],"location":{"chromosome_name":"supercont5.1","end_pos":3657485,"start_pos":3656574,"strand":"reverse"},"name":"mtq1","ortholog_annotations":[{"gene_uniquename":"SJAG_00286","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:24923","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00286","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC29B12.05c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00286","ortholog_taxonid":4932,"ortholog_uniquename":"YNL063W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00286","ortholog_taxonid":4932,"ortholog_uniquename":"YNL063W","reference_uniquename":"PMID:26896847"}],"product":"mitochondrial N(5)-glutamine methyltransferase","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null,"PMID:36408920":null},"signal_peptide":{"assigned_by":"UniProtKB","evidence":"ECO:0000256","feature_type":"signal peptide","range":{"end":25,"start":1},"reference":null,"termid":"SO:0000418"},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0102559"]}},"subset_termids":["GO:0140096","GO:0008276","GO:0140053","GO:0005739","GO:0016741"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005759":null,"GO:0070126":null,"GO:0102559":null,"SO:0000418":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00286.1"],"transcripts_by_uniquename":{"SJAG_00286.1":null},"uniprot_identifier":"B6JV80","uniquename":"SJAG_00286"}


id: SJAG_00287
data:
  {"cv_annotations":{"biological_process":[{"annotations":[73290],"is_not":false,"summary":null,"term":"GO:0042147"}],"cellular_component":[{"annotations":[59420],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[73289],"is_not":false,"summary":null,"term":"GO:0005770"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JV81","InterPro:IPR036188","GOA:B6JV81","EnsemblGenomes-Tr:EEB05282","EnsemblGenomes-Gn:SJAG_00287","InterPro:IPR006076"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pat10","uniquename":"SJAG_05414"},{"uniquename":"SJAG_05413"},{"name":"tup11","uniquename":"SJAG_00290"},{"uniquename":"SJAG_00289"},{"name":"pdi1","uniquename":"SJAG_00288"},{"uniquename":"SJAG_00287"},{"name":"mtq1","uniquename":"SJAG_00286"},{"name":"rcd1","uniquename":"SJAG_00285"},{"name":"sec16","uniquename":"SJAG_00284"},{"name":"snz1","uniquename":"SJAG_00283"},{"name":"gor2","uniquename":"SJAG_00281"}],"genes_by_uniquename":{"SJAG_00287":null,"SPAC1F5.03c":null,"YHR009C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"FAD dependent oxidoreductase","id":"PF01266","interpro_description":"FAD dependent oxidoreductase","interpro_id":"IPR006076","interpro_name":"FAD-dep_OxRdtase","locations":[{"end":363,"start":8}],"match_end":363,"match_start":8,"name":"DAO"},{"dbname":"SUPERFAMILY","id":"SSF51905","interpro_description":"FAD/NAD(P)-binding domain superfamily","interpro_id":"IPR036188","interpro_name":"FAD/NAD-bd_sf","locations":[{"end":229,"start":7},{"end":370,"start":326}],"match_end":370,"match_start":7,"name":"FAD/NAD(P)-binding domain"},{"dbname":"GENE3D","id":"G3DSA:3.30.9.10","locations":[{"end":135,"start":89},{"end":324,"start":227}],"match_end":324,"match_start":89},{"dbname":"GENE3D","id":"G3DSA:3.50.50.60","interpro_description":"FAD/NAD(P)-binding domain superfamily","interpro_id":"IPR036188","interpro_name":"FAD/NAD-bd_sf","locations":[{"end":88,"start":8},{"end":226,"start":136},{"end":368,"start":326}],"match_end":368,"match_start":8},{"dbname":"PANTHER","id":"PTHR13847","locations":[{"end":368,"start":6}],"match_end":368,"match_start":6,"name":"SARCOSINE DEHYDROGENASE-RELATED"}],"location":{"chromosome_name":"supercont5.1","end_pos":3656005,"start_pos":3654390,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":17,"start":1}},{"range":{"end":54,"start":41}},{"range":{"end":195,"start":166}}],"ortholog_annotations":[{"gene_uniquename":"SJAG_00287","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1F5.03c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00287","ortholog_taxonid":4932,"ortholog_uniquename":"YHR009C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00287","ortholog_taxonid":4932,"ortholog_uniquename":"YHR009C","reference_uniquename":"PMID:26896847"}],"product":"FAD-dependent oxidoreductase involved in late endosome to Golgi transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000108":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0005829","GO:0016192","GO:0031410","GO:0005768"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005770":null,"GO:0005829":null,"GO:0042147":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":25,"start":7}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00287.1"],"transcripts_by_uniquename":{"SJAG_00287.1":null},"uniprot_identifier":"B6JV81","uniquename":"SJAG_00287"}


id: SJAG_00288
data:
  {"chains":[{"assigned_by":"UniProtKB","range":{"end":508,"start":24}}],"cv_annotations":{"PSI-MOD":[{"annotations":[82323,82324],"is_not":false,"summary":null,"term":"MOD:00689"}],"biological_process":[{"annotations":[94123],"is_not":false,"summary":null,"term":"GO:0034975"},{"annotations":[74528],"is_not":false,"summary":null,"term":"GO:0034976"}],"cellular_component":[{"annotations":[94122],"is_not":false,"summary":null,"term":"GO:0005788"}],"molecular_function":[{"annotations":[74527],"is_not":false,"summary":null,"term":"GO:0003756"},{"annotations":[94126],"is_not":false,"summary":null,"term":"GO:0015035"}],"mondo":[{"annotations":[88497],"is_not":false,"summary":null,"term":"MONDO:0007204"}],"sequence":[{"annotations":[82325],"is_not":false,"summary":null,"term":"SO:0000418"}]},"dbxrefs":["InterPro:IPR013766","EnsemblGenomes-Gn:SJAG_00288","InterPro:IPR005792","EnsemblGenomes-Tr:EEB05283","GOA:B6JV82","InterPro:IPR005788","UniProtKB/TrEMBL:B6JV82","InterPro:IPR036249","InterPro:IPR017937"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":508,"start":468}}],"disulfide_bonds":[{"assigned_by":"UniProtKB","evidence":"ECO:0000256","range":{"end":55,"start":52}},{"assigned_by":"UniProtKB","evidence":"ECO:0000256","range":{"end":387,"start":384}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rhp6","uniquename":"SJAG_00293"},{"name":"pat10","uniquename":"SJAG_05414"},{"uniquename":"SJAG_05413"},{"name":"tup11","uniquename":"SJAG_00290"},{"uniquename":"SJAG_00289"},{"name":"pdi1","uniquename":"SJAG_00288"},{"uniquename":"SJAG_00287"},{"name":"mtq1","uniquename":"SJAG_00286"},{"name":"rcd1","uniquename":"SJAG_00285"},{"name":"sec16","uniquename":"SJAG_00284"},{"name":"snz1","uniquename":"SJAG_00283"}],"genes_by_uniquename":{"HGNC:14180":null,"HGNC:30167":null,"HGNC:4606":null,"HGNC:8548":null,"SJAG_00288":null,"SPAC1F5.02":null,"YCL043C":null,"YDR518W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Thioredoxin","id":"PF00085","interpro_description":"Thioredoxin domain","interpro_id":"IPR013766","interpro_name":"Thioredoxin_domain","locations":[{"end":126,"start":27},{"end":457,"start":358}],"match_end":457,"match_start":27,"name":"Thioredoxin"},{"dbname":"PFAM","description":"Thioredoxin-like domain","id":"PF13848","locations":[{"end":334,"start":157}],"match_end":334,"match_start":157,"name":"Thioredoxin_6"},{"dbname":"CDD","description":"PDI_a_PDI_a'_C","id":"cd02995","locations":[{"end":456,"start":357}],"match_end":456,"match_start":357,"name":"PDI_a_PDI_a'_C"},{"dbname":"CDD","description":"PDI_a_family","id":"cd02961","locations":[{"end":124,"start":28}],"match_end":124,"match_start":28,"name":"PDI_a_family"},{"dbname":"CDD","description":"PDI_b'_family","id":"cd02982","locations":[{"end":335,"start":237}],"match_end":335,"match_start":237,"name":"PDI_b'_family"},{"dbname":"CDD","description":"PDI_b_family","id":"cd02981","locations":[{"end":207,"start":132}],"match_end":207,"match_start":132,"name":"PDI_b_family"},{"dbname":"PROSITE_PATTERNS","description":"Thioredoxin family active site.","id":"PS00194","interpro_description":"Thioredoxin, conserved site","interpro_id":"IPR017937","interpro_name":"Thioredoxin_CS","locations":[{"end":62,"start":44},{"end":394,"start":376}],"match_end":394,"match_start":44,"name":"THIOREDOXIN_1"},{"dbname":"PROSITE_PROFILES","description":"Thioredoxin domain profile.","id":"PS51352","interpro_description":"Thioredoxin domain","interpro_id":"IPR013766","interpro_name":"Thioredoxin_domain","locations":[{"end":129,"start":14},{"end":461,"start":335}],"match_end":461,"match_start":14,"name":"THIOREDOXIN_2"},{"dbname":"PRINTS","description":"Thioredoxin family signature","id":"PR00421","locations":[{"end":392,"start":375},{"end":433,"start":422}],"match_end":433,"match_start":375,"name":"THIOREDOXIN"},{"dbname":"FUNFAM","description":"Protein disulfide-isomerase A4","id":"G3DSA:3.40.30.10:FF:000017","locations":[{"end":128,"start":17}],"match_end":128,"match_start":17},{"dbname":"SUPERFAMILY","id":"SSF52833","interpro_description":"Thioredoxin-like superfamily","interpro_id":"IPR036249","interpro_name":"Thioredoxin-like_sf","locations":[{"end":127,"start":21},{"end":224,"start":137},{"end":458,"start":232}],"match_end":458,"match_start":21,"name":"Thioredoxin-like"},{"dbname":"GENE3D","id":"G3DSA:3.40.30.10","locations":[{"end":481,"start":21}],"match_end":481,"match_start":21,"name":"Glutaredoxin"},{"dbname":"PANTHER","id":"PTHR18929","locations":[{"end":461,"start":11}],"match_end":461,"match_start":11,"name":"PROTEIN DISULFIDE ISOMERASE"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":508,"start":468}],"match_end":508,"match_start":468,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":488,"start":478}],"match_end":488,"match_start":478,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":501,"start":489}],"match_end":501,"match_start":489,"name":"disorder_prediction"},{"dbname":"NCBIFAM","description":"protein disulfide-isomerase","id":"TIGR01130","interpro_description":"Protein disulphide isomerase","interpro_id":"IPR005792","interpro_name":"Prot_disulphide_isomerase","locations":[{"end":481,"start":24}],"match_end":481,"match_start":24,"name":"ER_PDI_fam"},{"dbname":"NCBIFAM","description":"protein disulfide-isomerase domain","id":"TIGR01126","interpro_description":"Protein disulfide-isomerase, thioredoxin-like domain","interpro_id":"IPR005788","interpro_name":"PDI_thioredoxin-like_dom","locations":[{"end":126,"start":28},{"end":458,"start":360}],"match_end":458,"match_start":28,"name":"pdi_dom"}],"location":{"chromosome_name":"supercont5.1","end_pos":3652734,"start_pos":3651208,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":506,"start":462}}],"name":"pdi1","ortholog_annotations":[{"gene_uniquename":"SJAG_00288","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:14180","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00288","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:30167","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00288","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4606","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00288","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:8548","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00288","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1F5.02","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00288","ortholog_taxonid":4932,"ortholog_uniquename":"YCL043C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00288","ortholog_taxonid":4932,"ortholog_uniquename":"YCL043C","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_00288","ortholog_taxonid":4932,"ortholog_uniquename":"YDR518W","reference_uniquename":"PMID:29761456"}],"product":"ER protein disulfide isomerase","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null,"PMID:36408920":null},"signal_peptide":{"assigned_by":"UniProtKB","evidence":"ECO:0000256","feature_type":"signal peptide","range":{"end":23,"start":1},"reference":null,"termid":"SO:0000418"},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0003756","GO:0015035"]}},"subset_termids":["GO:0016491","MONDO:0005497","GO:0051604","GO:0015036","GO:0140096","GO:0016853","GO:0005783","GO:0006457"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003756":null,"GO:0005788":null,"GO:0015035":null,"GO:0034975":null,"GO:0034976":null,"MOD:00689":null,"MONDO:0007204":null,"SO:0000418":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00288.1"],"transcripts_by_uniquename":{"SJAG_00288.1":null},"uniprot_identifier":"B6JV82","uniquename":"SJAG_00288"}


id: SJAG_00289
data:
  {"cv_annotations":{"biological_process":[{"annotations":[74910],"is_not":false,"summary":null,"term":"GO:0032007"}],"cellular_component":[{"annotations":[93071],"is_not":false,"summary":null,"term":"GO:0032153"},{"annotations":[61487],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[74909],"is_not":false,"summary":null,"term":"GO:0033596"}],"molecular_function":[{"annotations":[74907],"is_not":false,"summary":null,"term":"GO:0005096"}],"mondo":[{"annotations":[88403],"is_not":false,"summary":null,"term":"MONDO:0011818"},{"annotations":[88736],"is_not":false,"summary":null,"term":"MONDO:0011705"},{"annotations":[88252],"is_not":false,"summary":null,"term":"MONDO:0013199"}]},"dbxrefs":["InterPro:IPR024584","UniProtKB/TrEMBL:B6JV83","InterPro:IPR027107","EnsemblGenomes-Gn:SJAG_00289","EnsemblGenomes-Tr:EEB05284","GOA:B6JV83"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"lcp5","uniquename":"SJAG_00294"},{"name":"rhp6","uniquename":"SJAG_00293"},{"name":"pat10","uniquename":"SJAG_05414"},{"uniquename":"SJAG_05413"},{"name":"tup11","uniquename":"SJAG_00290"},{"uniquename":"SJAG_00289"},{"name":"pdi1","uniquename":"SJAG_00288"},{"uniquename":"SJAG_00287"},{"name":"mtq1","uniquename":"SJAG_00286"},{"name":"rcd1","uniquename":"SJAG_00285"},{"name":"sec16","uniquename":"SJAG_00284"}],"genes_by_uniquename":{"HGNC:12363":null,"SJAG_00289":null,"SPAC18B11.11":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Domain of unknown function (DUF3384)","id":"PF11864","interpro_description":"Tuberin, N-terminal","interpro_id":"IPR024584","interpro_name":"Tuberin_N","locations":[{"end":475,"start":20}],"match_end":475,"match_start":20,"name":"DUF3384"},{"dbname":"PANTHER","id":"PTHR10063","interpro_description":"Tuberin/Ral GTPase-activating protein subunit alpha","interpro_id":"IPR027107","interpro_name":"Tuberin/Ral-act_asu","locations":[{"end":1143,"start":1021}],"match_end":1143,"match_start":1021,"name":"TUBERIN"}],"location":{"chromosome_name":"supercont5.1","end_pos":3650790,"start_pos":3646897,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":220,"start":211}},{"range":{"end":290,"start":279}},{"range":{"end":1092,"start":1078}}],"ortholog_annotations":[{"gene_uniquename":"SJAG_00289","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:12363","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00289","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC18B11.11","reference_uniquename":"PMID:21511999"}],"product":"GTPase activating protein, Tsc2 paralog","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0005096"]}},"subset_termids":["MONDO:0020022","GO:0005634","GO:0030234","GO:0023052","GO:0098772","MONDO:0000426","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005096":null,"GO:0005634":null,"GO:0032007":null,"GO:0032153":null,"GO:0033596":null,"MONDO:0011705":null,"MONDO:0011818":null,"MONDO:0013199":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00289.1"],"transcripts_by_uniquename":{"SJAG_00289.1":null},"uniprot_identifier":"B6JV83","uniquename":"SJAG_00289"}


id: SJAG_00290
data:
  {"coiled_coil_coords":[{"range":{"end":34,"start":14}},{"range":{"end":88,"start":43}}],"cv_annotations":{"biological_process":[{"annotations":[93069],"is_not":false,"summary":null,"term":"GO:0000122"}],"cellular_component":[{"annotations":[93065],"is_not":false,"summary":null,"term":"GO:0000785"},{"annotations":[93066],"is_not":false,"summary":null,"term":"GO:0160051"},{"annotations":[93067],"is_not":false,"summary":null,"term":"GO:0005829"}],"molecular_function":[{"annotations":[93070],"is_not":false,"summary":null,"term":"GO:0003714"}]},"dbxrefs":["InterPro:IPR020472","UniProtKB/TrEMBL:B6JV84","InterPro:IPR019775","InterPro:IPR036322","EnsemblGenomes-Gn:SJAG_00290","GOA:B6JV84","InterPro:IPR013890","EnsemblGenomes-Tr:EEB05285","InterPro:IPR017986","InterPro:IPR001680","InterPro:IPR015943"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":216,"start":154}},{"range":{"end":305,"start":247}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"gpi18","uniquename":"SJAG_00295"},{"name":"lcp5","uniquename":"SJAG_00294"},{"name":"rhp6","uniquename":"SJAG_00293"},{"name":"pat10","uniquename":"SJAG_05414"},{"uniquename":"SJAG_05413"},{"name":"tup11","uniquename":"SJAG_00290"},{"uniquename":"SJAG_00289"},{"name":"pdi1","uniquename":"SJAG_00288"},{"uniquename":"SJAG_00287"},{"name":"mtq1","uniquename":"SJAG_00286"},{"name":"rcd1","uniquename":"SJAG_00285"}],"genes_by_uniquename":{"SJAG_00290":null,"SPAC18B11.10":null,"YCR084C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"WD domain, G-beta repeat","id":"PF00400","interpro_description":"WD40 repeat","interpro_id":"IPR001680","interpro_name":"WD40_rpt","locations":[{"end":359,"start":326},{"end":408,"start":382},{"end":449,"start":412},{"end":491,"start":454},{"end":531,"start":494},{"end":583,"start":548},{"end":625,"start":590}],"match_end":625,"match_start":326,"name":"WD40"},{"dbname":"PFAM","description":"Tup N-terminal","id":"PF08581","interpro_description":"Transcriptional repressor Tup1, N-terminal","interpro_id":"IPR013890","interpro_name":"Tscrpt_rep_Tup1_N","locations":[{"end":85,"start":9}],"match_end":85,"match_start":9,"name":"Tup_N"},{"dbname":"CDD","description":"WD40","id":"cd00200","locations":[{"end":625,"start":326}],"match_end":625,"match_start":326,"name":"WD40"},{"dbname":"PROSITE_PATTERNS","description":"Trp-Asp (WD) repeats signature.","id":"PS00678","interpro_description":"WD40 repeat, conserved site","interpro_id":"IPR019775","interpro_name":"WD40_repeat_CS","locations":[{"end":409,"start":395},{"end":451,"start":437},{"end":533,"start":519},{"end":584,"start":570}],"match_end":584,"match_start":395,"name":"WD_REPEATS_1"},{"dbname":"PROSITE_PROFILES","description":"Trp-Asp (WD) repeats profile.","id":"PS50082","interpro_description":"WD40 repeat","interpro_id":"IPR001680","interpro_name":"WD40_rpt","locations":[{"end":492,"start":383},{"end":541,"start":500},{"end":630,"start":551}],"match_end":630,"match_start":383,"name":"WD_REPEATS_2"},{"dbname":"PROSITE_PROFILES","description":"Trp-Asp (WD) repeats circular profile.","id":"PS50294","locations":[{"end":413,"start":376},{"end":455,"start":418},{"end":492,"start":459},{"end":534,"start":500},{"end":588,"start":551},{"end":630,"start":593}],"match_end":630,"match_start":376,"name":"WD_REPEATS_REGION"},{"dbname":"SMART","id":"SM00320","interpro_description":"WD40 repeat","interpro_id":"IPR001680","interpro_name":"WD40_rpt","locations":[{"end":360,"start":323},{"end":408,"start":363},{"end":450,"start":411},{"end":491,"start":453},{"end":532,"start":493},{"end":583,"start":544},{"end":625,"start":586}],"match_end":625,"match_start":323,"name":"WD40_4"},{"dbname":"PRINTS","description":"G protein beta WD-40 repeat signature","id":"PR00320","interpro_description":"G-protein beta WD-40 repeat","interpro_id":"IPR020472","interpro_name":"G-protein_beta_WD-40_rep","locations":[{"end":409,"start":395},{"end":451,"start":437},{"end":533,"start":519}],"match_end":533,"match_start":395,"name":"GPROTEINBRPT"},{"dbname":"SUPERFAMILY","id":"SSF50978","interpro_description":"WD40-repeat-containing domain superfamily","interpro_id":"IPR036322","interpro_name":"WD40_repeat_dom_sf","locations":[{"end":627,"start":328}],"match_end":627,"match_start":328,"name":"WD40 repeat-like"},{"dbname":"GENE3D","id":"G3DSA:2.130.10.10","interpro_description":"WD40/YVTN repeat-like-containing domain superfamily","interpro_id":"IPR015943","interpro_name":"WD40/YVTN_repeat-like_dom_sf","locations":[{"end":630,"start":273}],"match_end":630,"match_start":273},{"dbname":"GENE3D","id":"G3DSA:1.20.5.340","locations":[{"end":90,"start":1}],"match_end":90,"match_start":1},{"dbname":"PANTHER","id":"PTHR19848","locations":[{"end":626,"start":31}],"match_end":626,"match_start":31,"name":"WD40 REPEAT PROTEIN"},{"dbname":"COILS","id":"Coil","locations":[{"end":34,"start":14},{"end":88,"start":43}],"match_end":88,"match_start":14,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":216,"start":154},{"end":305,"start":247}],"match_end":305,"match_start":154,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":292,"start":278}],"match_end":292,"match_start":278,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":195,"start":183}],"match_end":195,"match_start":183,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":305,"start":293}],"match_end":305,"match_start":293,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3646170,"start_pos":3644172,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":238,"start":226}},{"range":{"end":291,"start":277}}],"name":"tup11","ortholog_annotations":[{"gene_uniquename":"SJAG_00290","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC18B11.10","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00290","ortholog_taxonid":4932,"ortholog_uniquename":"YCR084C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00290","ortholog_taxonid":4932,"ortholog_uniquename":"YCR084C","reference_uniquename":"PMID:26896847"}],"product":"transcriptional corepressor Tup11","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0003714"]}},"subset_termids":["GO:0003712","GO:0005634","GO:0060090","GO:0005829","GO:0005694","GO:0006355","GO:0006351"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000122":null,"GO:0000785":null,"GO:0003714":null,"GO:0005829":null,"GO:0160051":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00290.1"],"transcripts_by_uniquename":{"SJAG_00290.1":null},"uniprot_identifier":"B6JV84","uniquename":"SJAG_00290"}


id: SJAG_00293
data:
  {"active_sites":[{"assigned_by":"UniProtKB","range":{"end":88,"start":88}}],"cv_annotations":{"biological_process":[{"annotations":[73053],"is_not":false,"summary":null,"term":"GO:0006281"},{"annotations":[93051],"is_not":false,"summary":null,"term":"GO:0007535"},{"annotations":[93052],"is_not":false,"summary":null,"term":"GO:0040029"},{"annotations":[93053],"is_not":false,"summary":null,"term":"GO:2000639"},{"annotations":[73051],"is_not":false,"summary":null,"term":"GO:0043161"},{"annotations":[93055],"is_not":false,"summary":null,"term":"GO:0140673"}],"cellular_component":[{"annotations":[59089],"is_not":false,"summary":null,"term":"GO:0140445"},{"annotations":[93046],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[73052],"is_not":false,"summary":null,"term":"GO:0033503"},{"annotations":[93048],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[59088],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[73054],"is_not":false,"summary":null,"term":"GO:0061631"}],"mondo":[{"annotations":[88695],"is_not":false,"summary":null,"term":"MONDO:0010461"}]},"dbxrefs":["InterPro:IPR016135","UniProtKB/TrEMBL:B6JV86","InterPro:IPR023313","GOA:B6JV86","EnsemblGenomes-Tr:EEB05287","EnsemblGenomes-Gn:SJAG_00293","InterPro:IPR000608"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":25,"start":1}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pci2","uniquename":"SJAG_00298"},{"name":"pmc4","uniquename":"SJAG_00297"},{"name":"ncs1","uniquename":"SJAG_00296"},{"name":"gpi18","uniquename":"SJAG_00295"},{"name":"lcp5","uniquename":"SJAG_00294"},{"name":"rhp6","uniquename":"SJAG_00293"},{"name":"pat10","uniquename":"SJAG_05414"},{"uniquename":"SJAG_05413"},{"name":"tup11","uniquename":"SJAG_00290"},{"uniquename":"SJAG_00289"},{"name":"pdi1","uniquename":"SJAG_00288"}],"genes_by_uniquename":{"HGNC:12472":null,"HGNC:12473":null,"SJAG_00293":null,"SPAC18B11.07c":null,"YGL058W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Ubiquitin-conjugating enzyme","id":"PF00179","interpro_description":"Ubiquitin-conjugating enzyme E2, catalytic core domain","interpro_id":"IPR000608","interpro_name":"UBQ-conjugat_E2_core","locations":[{"end":144,"start":8}],"match_end":144,"match_start":8,"name":"UQ_con"},{"dbname":"CDD","description":"UBCc_UBE2A_2B","id":"cd23790","locations":[{"end":145,"start":3}],"match_end":145,"match_start":3,"name":"UBCc_UBE2A_2B"},{"dbname":"PROSITE_PATTERNS","description":"Ubiquitin-conjugating (UBC) active site signature.","id":"PS00183","interpro_description":"Ubiquitin-conjugating enzyme, active site","interpro_id":"IPR023313","interpro_name":"UBQ-conjugating_AS","locations":[{"end":92,"start":77}],"match_end":92,"match_start":77,"name":"UBC_1"},{"dbname":"PROSITE_PROFILES","description":"Ubiquitin-conjugating (UBC) core domain profile.","id":"PS50127","interpro_description":"Ubiquitin-conjugating enzyme E2, catalytic core domain","interpro_id":"IPR000608","interpro_name":"UBQ-conjugat_E2_core","locations":[{"end":150,"start":4}],"match_end":150,"match_start":4,"name":"UBC_2"},{"dbname":"SMART","id":"SM00212","locations":[{"end":150,"start":7}],"match_end":150,"match_start":7,"name":"ubc_7"},{"dbname":"FUNFAM","description":"Ubiquitin-conjugating enzyme E2 2","id":"G3DSA:3.10.110.10:FF:000007","locations":[{"end":151,"start":1}],"match_end":151,"match_start":1},{"dbname":"SUPERFAMILY","id":"SSF54495","interpro_description":"Ubiquitin-conjugating enzyme/RWD-like","interpro_id":"IPR016135","interpro_name":"UBQ-conjugating_enzyme/RWD","locations":[{"end":149,"start":1}],"match_end":149,"match_start":1,"name":"UBC-like"},{"dbname":"GENE3D","id":"G3DSA:3.10.110.10","interpro_description":"Ubiquitin-conjugating enzyme/RWD-like","interpro_id":"IPR016135","interpro_name":"UBQ-conjugating_enzyme/RWD","locations":[{"end":149,"start":1}],"match_end":149,"match_start":1,"name":"Ubiquitin Conjugating Enzyme"},{"dbname":"PANTHER","id":"PTHR24067","interpro_description":"Ubiquitin-conjugating enzyme","interpro_id":"IPR050113","interpro_name":"Ub_conjugating_enzyme","locations":[{"end":147,"start":3}],"match_end":147,"match_start":3,"name":"UBIQUITIN-CONJUGATING ENZYME E2"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":25,"start":1}],"match_end":25,"match_start":1,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3641112,"start_pos":3640149,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":126,"start":113}}],"name":"rhp6","ortholog_annotations":[{"gene_uniquename":"SJAG_00293","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:12472","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00293","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:12473","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00293","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC18B11.07c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00293","ortholog_taxonid":4932,"ortholog_uniquename":"YGL058W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00293","ortholog_taxonid":4932,"ortholog_uniquename":"YGL058W","reference_uniquename":"PMID:26896847"}],"product":"histone H2B-K119 ubiquitin ligase complex (HULC), ubiquitin conjugating enzyme E2 subunit Rhp6/Rad6","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005524"],"not-binding":["GO:0061631"]}},"subset_termids":["GO:0023052","GO:0140096","GO:0006351","GO:0005634","GO:0030163","GO:0006325","GO:0005694","GO:0005829","GO:0019787","GO:0016746","GO:0006281"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005524":null,"GO:0005634":null,"GO:0005829":null,"GO:0006281":null,"GO:0007535":null,"GO:0033503":null,"GO:0040029":null,"GO:0043161":null,"GO:0061631":null,"GO:0140445":null,"GO:0140673":null,"GO:2000639":null,"MONDO:0010461":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00293.1"],"transcripts_by_uniquename":{"SJAG_00293.1":null},"uniprot_identifier":"B6JV86","uniquename":"SJAG_00293"}


id: SJAG_00294
data:
  {"cv_annotations":{"biological_process":[{"annotations":[93044],"is_not":false,"summary":null,"term":"GO:0000462"}],"cellular_component":[{"annotations":[93040],"is_not":false,"summary":null,"term":"GO:0005730"},{"annotations":[93042],"is_not":false,"summary":null,"term":"GO:0032040"},{"annotations":[93043],"is_not":false,"summary":null,"term":"GO:0005732"}],"molecular_function":[{"annotations":[93045],"is_not":false,"summary":null,"term":"GO:0003723"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JV87","EnsemblGenomes-Tr:EEB05288","EnsemblGenomes-Gn:SJAG_00294","InterPro:IPR007146"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":167,"start":107}},{"range":{"end":309,"start":265}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"emp70","uniquename":"SJAG_00299"},{"name":"pci2","uniquename":"SJAG_00298"},{"name":"pmc4","uniquename":"SJAG_00297"},{"name":"ncs1","uniquename":"SJAG_00296"},{"name":"gpi18","uniquename":"SJAG_00295"},{"name":"lcp5","uniquename":"SJAG_00294"},{"name":"rhp6","uniquename":"SJAG_00293"},{"name":"pat10","uniquename":"SJAG_05414"},{"uniquename":"SJAG_05413"},{"name":"tup11","uniquename":"SJAG_00290"},{"uniquename":"SJAG_00289"}],"genes_by_uniquename":{"HGNC:20271":null,"SJAG_00294":null,"SPAC18B11.06":null,"YER127W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Sas10/Utp3/C1D family","id":"PF04000","interpro_description":"Sas10/Utp3/C1D","interpro_id":"IPR007146","interpro_name":"Sas10/Utp3/C1D","locations":[{"end":75,"start":5}],"match_end":75,"match_start":5,"name":"Sas10_Utp3"},{"dbname":"PANTHER","id":"PTHR13237","locations":[{"end":277,"start":13}],"match_end":277,"match_start":13,"name":"SOMETHING ABOUT SILENCING PROTEIN 10-RELATED"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":167,"start":107},{"end":309,"start":265}],"match_end":309,"match_start":107,"name":"disorder_prediction"},{"dbname":"MOBIDB-Negative-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Negative-Polyelectrolyte","locations":[{"end":140,"start":128}],"match_end":140,"match_start":128,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":280,"start":265}],"match_end":280,"match_start":265,"name":"disorder_prediction"},{"dbname":"MOBIDB-Positive-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Positive-Polyelectrolyte","locations":[{"end":309,"start":300}],"match_end":309,"match_start":300,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3639631,"start_pos":3638702,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":37,"start":26}},{"range":{"end":113,"start":104}},{"range":{"end":190,"start":178}},{"range":{"end":242,"start":226}}],"name":"lcp5","ortholog_annotations":[{"gene_uniquename":"SJAG_00294","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:20271","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00294","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC18B11.06","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00294","ortholog_taxonid":4932,"ortholog_uniquename":"YER127W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00294","ortholog_taxonid":4932,"ortholog_uniquename":"YER127W","reference_uniquename":"PMID:26896847"}],"product":"U3 snoRNP-associated protein Lcp5","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003723"]}},"subset_termids":["GO:0042254","GO:0005634","GO:0005730","GO:0030684"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000462":null,"GO:0003723":null,"GO:0005730":null,"GO:0005732":null,"GO:0032040":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00294.1"],"transcripts_by_uniquename":{"SJAG_00294.1":null},"uniprot_identifier":"B6JV87","uniquename":"SJAG_00294"}


id: SJAG_00295
data:
  {"cv_annotations":{"biological_process":[{"annotations":[71561],"is_not":false,"summary":null,"term":"GO:0006506"}],"cellular_component":[{"annotations":[71559],"is_not":false,"summary":null,"term":"GO:0005789"},{"annotations":[93037],"is_not":false,"summary":null,"term":"GO:0120097"}],"molecular_function":[{"annotations":[93039],"is_not":false,"summary":null,"term":"GO:0120563"}],"mondo":[{"annotations":[88112],"is_not":false,"summary":null,"term":"MONDO:0009398"}]},"dbxrefs":["InterPro:IPR007315","GOA:B6JV88","EnsemblGenomes-Gn:SJAG_00295","EnsemblGenomes-Tr:EEB05289","UniProtKB/TrEMBL:B6JV88"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":22,"start":1}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ubc15","uniquename":"SJAG_00300"},{"name":"emp70","uniquename":"SJAG_00299"},{"name":"pci2","uniquename":"SJAG_00298"},{"name":"pmc4","uniquename":"SJAG_00297"},{"name":"ncs1","uniquename":"SJAG_00296"},{"name":"gpi18","uniquename":"SJAG_00295"},{"name":"lcp5","uniquename":"SJAG_00294"},{"name":"rhp6","uniquename":"SJAG_00293"},{"name":"pat10","uniquename":"SJAG_05414"},{"uniquename":"SJAG_05413"},{"name":"tup11","uniquename":"SJAG_00290"}],"genes_by_uniquename":{"HGNC:26031":null,"SJAG_00295":null,"SPAC18B11.05":null,"YBR004C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Mannosyltransferase (PIG-V)","id":"PF04188","interpro_description":"GPI mannosyltransferase 2","interpro_id":"IPR007315","interpro_name":"PIG-V/Gpi18","locations":[{"end":425,"start":43}],"match_end":425,"match_start":43,"name":"Mannosyl_trans2"},{"dbname":"PANTHER","id":"PTHR12468","interpro_description":"GPI mannosyltransferase 2","interpro_id":"IPR007315","interpro_name":"PIG-V/Gpi18","locations":[{"end":425,"start":32}],"match_end":425,"match_start":32,"name":"GPI MANNOSYLTRANSFERASE 2"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":22,"start":1}],"match_end":22,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":20,"start":1}],"match_end":20,"match_start":1,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3637790,"start_pos":3636513,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":69,"start":56}},{"range":{"end":201,"start":189}},{"range":{"end":333,"start":320}}],"name":"gpi18","ortholog_annotations":[{"gene_uniquename":"SJAG_00295","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:26031","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00295","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC18B11.05","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00295","ortholog_taxonid":4932,"ortholog_uniquename":"YBR004C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00295","ortholog_taxonid":4932,"ortholog_uniquename":"YBR004C","reference_uniquename":"PMID:26896847"}],"product":"pig-V, dol-P-Man:Man(1)GlcN-acyl-PI alpha-1,6-mannosyltransferase","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0120563"]}},"subset_termids":["GO:0016757","GO:0005783","GO:0005789","GO:0051604","MONDO:0024322","MONDO:0002525","MONDO:0005066","GO:0006629"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005789":null,"GO:0006506":null,"GO:0120097":null,"GO:0120563":null,"MONDO:0009398":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":55,"start":33}},{"assigned_by":"TMHMM","range":{"end":152,"start":130}},{"assigned_by":"TMHMM","range":{"end":187,"start":165}},{"assigned_by":"TMHMM","range":{"end":214,"start":192}},{"assigned_by":"TMHMM","range":{"end":245,"start":223}},{"assigned_by":"TMHMM","range":{"end":272,"start":255}},{"assigned_by":"TMHMM","range":{"end":337,"start":315}},{"assigned_by":"TMHMM","range":{"end":363,"start":341}},{"assigned_by":"TMHMM","range":{"end":422,"start":400}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00295.1"],"transcripts_by_uniquename":{"SJAG_00295.1":null},"uniprot_identifier":"B6JV88","uniquename":"SJAG_00295"}


id: SJAG_00296
data:
  {"cv_annotations":{"biological_process":[{"annotations":[93030],"is_not":false,"summary":null,"term":"GO:0019722"},{"annotations":[93031],"is_not":false,"summary":null,"term":"GO:1905949"},{"annotations":[93032],"is_not":false,"summary":null,"term":"GO:0046854"}],"cellular_component":[{"annotations":[93026],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[93027],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[93028],"is_not":false,"summary":null,"term":"GO:0005886"},{"annotations":[93029],"is_not":false,"summary":null,"term":"GO:0032588"}],"molecular_function":[{"annotations":[93033],"is_not":false,"summary":null,"term":"GO:0098744"},{"annotations":[80797],"is_not":false,"summary":null,"term":"GO:0005509"}]},"dbxrefs":["InterPro:IPR018247","EnsemblGenomes-Gn:SJAG_00296","InterPro:IPR011992","UniProtKB/TrEMBL:B6JV89","InterPro:IPR028846","GOA:B6JV89","EnsemblGenomes-Tr:EEB05290","InterPro:IPR002048"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rav1","uniquename":"SJAG_00301"},{"name":"ubc15","uniquename":"SJAG_00300"},{"name":"emp70","uniquename":"SJAG_00299"},{"name":"pci2","uniquename":"SJAG_00298"},{"name":"pmc4","uniquename":"SJAG_00297"},{"name":"ncs1","uniquename":"SJAG_00296"},{"name":"gpi18","uniquename":"SJAG_00295"},{"name":"lcp5","uniquename":"SJAG_00294"},{"name":"rhp6","uniquename":"SJAG_00293"},{"name":"pat10","uniquename":"SJAG_05414"},{"uniquename":"SJAG_05413"}],"genes_by_uniquename":{"HGNC:3953":null,"SJAG_00296":null,"SPAC18B11.04":null,"YDR373W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"EF-hand domain","id":"PF13405","interpro_description":"EF-hand domain","interpro_id":"IPR002048","interpro_name":"EF_hand_dom","locations":[{"end":90,"start":66}],"match_end":90,"match_start":66,"name":"EF-hand_6"},{"dbname":"PFAM","description":"EF-hand domain pair","id":"PF13499","interpro_description":"EF-hand domain","interpro_id":"IPR002048","interpro_name":"EF_hand_dom","locations":[{"end":171,"start":99}],"match_end":171,"match_start":99,"name":"EF-hand_7"},{"dbname":"CDD","description":"EFh","id":"cd00051","interpro_description":"EF-hand domain","interpro_id":"IPR002048","interpro_name":"EF_hand_dom","locations":[{"end":172,"start":65}],"match_end":172,"match_start":65,"name":"EFh"},{"dbname":"PROSITE_PATTERNS","description":"EF-hand calcium-binding domain.","id":"PS00018","interpro_description":"EF-Hand 1, calcium-binding site","interpro_id":"IPR018247","interpro_name":"EF_Hand_1_Ca_BS","locations":[{"end":85,"start":73},{"end":121,"start":109},{"end":169,"start":157}],"match_end":169,"match_start":73,"name":"EF_HAND_1"},{"dbname":"PROSITE_PROFILES","description":"EF-hand calcium-binding domain profile.","id":"PS50222","interpro_description":"EF-hand domain","interpro_id":"IPR002048","interpro_name":"EF_hand_dom","locations":[{"end":131,"start":60},{"end":179,"start":144}],"match_end":179,"match_start":60,"name":"EF_HAND_2"},{"dbname":"SMART","id":"SM00054","interpro_description":"EF-hand domain","interpro_id":"IPR002048","interpro_name":"EF_hand_dom","locations":[{"end":92,"start":64},{"end":128,"start":100},{"end":176,"start":148}],"match_end":176,"match_start":64,"name":"efh_1"},{"dbname":"PRINTS","description":"Recoverin family signature","id":"PR00450","locations":[{"end":41,"start":8},{"end":89,"start":68},{"end":111,"start":92},{"end":132,"start":114},{"end":153,"start":138},{"end":184,"start":164}],"match_end":184,"match_start":8,"name":"RECOVERIN"},{"dbname":"FUNFAM","description":"Visinin-like protein 1","id":"G3DSA:1.10.238.10:FF:000009","locations":[{"end":189,"start":1}],"match_end":189,"match_start":1},{"dbname":"SUPERFAMILY","id":"SSF47473","interpro_description":"EF-hand domain pair","interpro_id":"IPR011992","interpro_name":"EF-hand-dom_pair","locations":[{"end":188,"start":1}],"match_end":188,"match_start":1,"name":"EF-hand"},{"dbname":"GENE3D","id":"G3DSA:1.10.238.10","locations":[{"end":190,"start":1}],"match_end":190,"match_start":1},{"dbname":"PANTHER","id":"PTHR23055","interpro_description":"Recoverin family","interpro_id":"IPR028846","interpro_name":"Recoverin","locations":[{"end":181,"start":6}],"match_end":181,"match_start":6,"name":"CALCIUM BINDING PROTEINS"}],"location":{"chromosome_name":"supercont5.1","end_pos":3635761,"start_pos":3634918,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":13,"start":2}}],"name":"ncs1","ortholog_annotations":[{"gene_uniquename":"SJAG_00296","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:3953","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00296","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC18B11.04","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00296","ortholog_taxonid":4932,"ortholog_uniquename":"YDR373W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00296","ortholog_taxonid":4932,"ortholog_uniquename":"YDR373W","reference_uniquename":"PMID:26896847"}],"product":"neuronal calcium sensor related protein Ncs1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005509"],"not-binding":["GO:0098744"]}},"subset_termids":["GO:0023052","GO:0005886","GO:0055085","GO:0005829","GO:0030234","GO:0098772","GO:0005794","GO:0005634","GO:0006629"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005509":null,"GO:0005634":null,"GO:0005829":null,"GO:0005886":null,"GO:0019722":null,"GO:0032588":null,"GO:0046854":null,"GO:0098744":null,"GO:1905949":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00296.1"],"transcripts_by_uniquename":{"SJAG_00296.1":null},"uniprot_identifier":"B6JV89","uniquename":"SJAG_00296"}


id: SJAG_00297
data:
  {"coiled_coil_coords":[{"range":{"end":81,"start":61}}],"cv_annotations":{"biological_process":[{"annotations":[103776],"is_not":false,"summary":null,"term":"GO:0060261"}],"cellular_component":[{"annotations":[103773],"is_not":false,"summary":null,"term":"GO:0070847"},{"annotations":[68065],"is_not":false,"summary":null,"term":"GO:0016592"}],"molecular_function":[{"annotations":[103777],"is_not":false,"summary":null,"term":"GO:0003713"}]},"dbxrefs":["InterPro:IPR019258","UniProtKB/TrEMBL:B6JV90","GOA:B6JV90","EnsemblGenomes-Tr:EEB05291","EnsemblGenomes-Gn:SJAG_00297"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":247,"start":189}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"hht3","uniquename":"SJAG_00302"},{"name":"rav1","uniquename":"SJAG_00301"},{"name":"ubc15","uniquename":"SJAG_00300"},{"name":"emp70","uniquename":"SJAG_00299"},{"name":"pci2","uniquename":"SJAG_00298"},{"name":"pmc4","uniquename":"SJAG_00297"},{"name":"ncs1","uniquename":"SJAG_00296"},{"name":"gpi18","uniquename":"SJAG_00295"},{"name":"lcp5","uniquename":"SJAG_00294"},{"name":"rhp6","uniquename":"SJAG_00293"},{"name":"pat10","uniquename":"SJAG_05414"}],"genes_by_uniquename":{"HGNC:17903":null,"SJAG_00297":null,"SPBC1105.06":null,"YOR174W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Vitamin-D-receptor interacting Mediator subunit 4","id":"PF10018","interpro_description":"Mediator complex, subunit Med4","interpro_id":"IPR019258","interpro_name":"Mediator_Med4","locations":[{"end":179,"start":43}],"match_end":179,"match_start":43,"name":"Med4"},{"dbname":"PANTHER","id":"PTHR13208","interpro_description":"Mediator complex, subunit Med4","interpro_id":"IPR019258","interpro_name":"Mediator_Med4","locations":[{"end":225,"start":43}],"match_end":225,"match_start":43,"name":"MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 4"},{"dbname":"COILS","id":"Coil","locations":[{"end":81,"start":61}],"match_end":81,"match_start":61,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":247,"start":189}],"match_end":247,"match_start":189,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":207,"start":198}],"match_end":207,"match_start":198,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3634359,"start_pos":3633616,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":75,"start":62}},{"range":{"end":206,"start":197}}],"name":"pmc4","ortholog_annotations":[{"gene_uniquename":"SJAG_00297","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:17903","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00297","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1105.06","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00297","ortholog_taxonid":4932,"ortholog_uniquename":"YOR174W","reference_uniquename":"PMID:29761456"}],"product":"mediator complex subunit Med4","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0003713"]}},"subset_termids":["GO:0005634","GO:0003713","GO:0006355","GO:0006351","GO:0003712","GO:0060090"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003713":null,"GO:0016592":null,"GO:0060261":null,"GO:0070847":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00297.1"],"transcripts_by_uniquename":{"SJAG_00297.1":null},"uniprot_identifier":"B6JV90","uniquename":"SJAG_00297"}


id: SJAG_00298
data:
  {"cv_annotations":{"biological_process":[{"annotations":[76107],"is_not":false,"summary":null,"term":"GO:0016973"},{"annotations":[76105],"is_not":false,"summary":null,"term":"GO:0000973"}],"cellular_component":[{"annotations":[103778],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[103779],"is_not":false,"summary":null,"term":"GO:0005635"},{"annotations":[76106],"is_not":false,"summary":null,"term":"GO:0070390"}],"molecular_function":[{"annotations":[76108],"is_not":false,"summary":null,"term":"GO:0003690"},{"annotations":[76109],"is_not":false,"summary":null,"term":"GO:0003723"}]},"dbxrefs":["InterPro:IPR040114","EnsemblGenomes-Gn:SJAG_00298","InterPro:IPR000717","InterPro:IPR036388","UniProtKB/TrEMBL:B6JV91","EnsemblGenomes-Tr:EEB05292"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"hhf3","uniquename":"SJAG_00303"},{"name":"hht3","uniquename":"SJAG_00302"},{"name":"rav1","uniquename":"SJAG_00301"},{"name":"ubc15","uniquename":"SJAG_00300"},{"name":"emp70","uniquename":"SJAG_00299"},{"name":"pci2","uniquename":"SJAG_00298"},{"name":"pmc4","uniquename":"SJAG_00297"},{"name":"ncs1","uniquename":"SJAG_00296"},{"name":"gpi18","uniquename":"SJAG_00295"},{"name":"lcp5","uniquename":"SJAG_00294"},{"name":"rhp6","uniquename":"SJAG_00293"}],"genes_by_uniquename":{"HGNC:25653":null,"SJAG_00298":null,"SPBC1105.07c":null,"YJR084W":null,"YOL072W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"PCI domain","id":"PF01399","interpro_description":"Proteasome component (PCI) domain","interpro_id":"IPR000717","interpro_name":"PCI_dom","locations":[{"end":404,"start":332}],"match_end":404,"match_start":332,"name":"PCI"},{"dbname":"PROSITE_PROFILES","description":"PCI domain profile.","id":"PS50250","interpro_description":"Proteasome component (PCI) domain","interpro_id":"IPR000717","interpro_name":"PCI_dom","locations":[{"end":408,"start":217}],"match_end":408,"match_start":217,"name":"PCI"},{"dbname":"SMART","description":"PCI/PINT associated module","id":"SM00753","locations":[{"end":322,"start":150}],"match_end":322,"match_start":150,"name":"PAM"},{"dbname":"GENE3D","id":"G3DSA:1.10.10.10","interpro_description":"Winged helix-like DNA-binding domain superfamily","interpro_id":"IPR036388","interpro_name":"WH-like_DNA-bd_sf","locations":[{"end":417,"start":346}],"match_end":417,"match_start":346},{"dbname":"PANTHER","id":"PTHR12732","interpro_description":"Csn12 family","interpro_id":"IPR045114","interpro_name":"Csn12-like","locations":[{"end":416,"start":1}],"match_end":416,"match_start":1,"name":"UNCHARACTERIZED PROTEASOME COMPONENT REGION PCI-CONTAINING"}],"location":{"chromosome_name":"supercont5.1","end_pos":3633418,"start_pos":3631889,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":62,"start":47}},{"range":{"end":362,"start":354}}],"name":"pci2","ortholog_annotations":[{"gene_uniquename":"SJAG_00298","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:25653","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00298","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1105.07c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00298","ortholog_taxonid":4932,"ortholog_uniquename":"YJR084W","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_00298","ortholog_taxonid":4932,"ortholog_uniquename":"YOL072W","reference_uniquename":"PMID:29761456"}],"product":"TREX/TREX2 complex subunit Pci2","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003723","GO:0003690"]}},"subset_termids":["GO:0005829","GO:0005634","GO:0006913"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000973":null,"GO:0003690":null,"GO:0003723":null,"GO:0005635":null,"GO:0005829":null,"GO:0016973":null,"GO:0070390":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00298.1"],"transcripts_by_uniquename":{"SJAG_00298.1":null},"uniprot_identifier":"B6JV91","uniquename":"SJAG_00298"}


id: SJAG_00299
data:
  {"cv_annotations":{"biological_process":[{"annotations":[103789],"is_not":false,"summary":null,"term":"GO:0016197"},{"annotations":[79197],"is_not":false,"summary":null,"term":"GO:0072657"},{"annotations":[79198],"is_not":false,"summary":null,"term":"GO:0007034"}],"cellular_component":[{"annotations":[103786],"is_not":false,"summary":null,"term":"GO:0010008"},{"annotations":[103787],"is_not":false,"summary":null,"term":"GO:0000329"},{"annotations":[103788],"is_not":false,"summary":null,"term":"GO:0005794"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_00299","GOA:B6JV92","EnsemblGenomes-Tr:EEB05293","InterPro:IPR004240","UniProtKB/TrEMBL:B6JV92"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rsv2","uniquename":"SJAG_00304"},{"name":"hhf3","uniquename":"SJAG_00303"},{"name":"hht3","uniquename":"SJAG_00302"},{"name":"rav1","uniquename":"SJAG_00301"},{"name":"ubc15","uniquename":"SJAG_00300"},{"name":"emp70","uniquename":"SJAG_00299"},{"name":"pci2","uniquename":"SJAG_00298"},{"name":"pmc4","uniquename":"SJAG_00297"},{"name":"ncs1","uniquename":"SJAG_00296"},{"name":"gpi18","uniquename":"SJAG_00295"},{"name":"lcp5","uniquename":"SJAG_00294"}],"genes_by_uniquename":{"HGNC:11865":null,"HGNC:30797":null,"SJAG_00299":null,"SPBC1105.08":null,"YDR107C":null,"YLR083C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Endomembrane protein 70","id":"PF02990","interpro_description":"Nonaspanin (TM9SF)","interpro_id":"IPR004240","interpro_name":"EMP70","locations":[{"end":569,"start":69}],"match_end":569,"match_start":69,"name":"EMP70"},{"dbname":"PANTHER","id":"PTHR10766","interpro_description":"Nonaspanin (TM9SF)","interpro_id":"IPR004240","interpro_name":"EMP70","locations":[{"end":570,"start":37}],"match_end":570,"match_start":37,"name":"TRANSMEMBRANE 9 SUPERFAMILY PROTEIN"}],"location":{"chromosome_name":"supercont5.1","end_pos":3631823,"start_pos":3629780,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":296,"start":282}},{"range":{"end":371,"start":350}},{"range":{"end":449,"start":438}}],"name":"emp70","ortholog_annotations":[{"gene_uniquename":"SJAG_00299","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11865","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00299","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:30797","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00299","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1105.08","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00299","ortholog_taxonid":4932,"ortholog_uniquename":"YDR107C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00299","ortholog_taxonid":4932,"ortholog_uniquename":"YDR107C","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_00299","ortholog_taxonid":4932,"ortholog_uniquename":"YLR083C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00299","ortholog_taxonid":4932,"ortholog_uniquename":"YLR083C","reference_uniquename":"PMID:26896847"}],"product":"EMP70 family endosomal transport protein Emp70","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0005773","GO:0031410","GO:0005794","GO:0005768","GO:0016192"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000329":null,"GO:0005794":null,"GO:0007034":null,"GO:0010008":null,"GO:0016197":null,"GO:0072657":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":33,"start":11}},{"assigned_by":"TMHMM","range":{"end":294,"start":272}},{"assigned_by":"TMHMM","range":{"end":356,"start":334}},{"assigned_by":"TMHMM","range":{"end":393,"start":371}},{"assigned_by":"TMHMM","range":{"end":428,"start":406}},{"assigned_by":"TMHMM","range":{"end":465,"start":443}},{"assigned_by":"TMHMM","range":{"end":509,"start":487}},{"assigned_by":"TMHMM","range":{"end":546,"start":524}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00299.1"],"transcripts_by_uniquename":{"SJAG_00299.1":null},"uniprot_identifier":"B6JV92","uniquename":"SJAG_00299"}


id: SJAG_00300
data:
  {"active_sites":[{"assigned_by":"UniProtKB","range":{"end":89,"start":89}}],"cv_annotations":{"biological_process":[{"annotations":[79751],"is_not":false,"summary":null,"term":"GO:0043161"}],"cellular_component":[{"annotations":[103792],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[68187],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[79752],"is_not":false,"summary":null,"term":"GO:0061631"}]},"dbxrefs":["GOA:B6JV93","EnsemblGenomes-Gn:SJAG_00300","InterPro:IPR016135","InterPro:IPR023313","UniProtKB/TrEMBL:B6JV93","InterPro:IPR000608","EnsemblGenomes-Tr:EEB05294"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"htd2","uniquename":"SJAG_00305"},{"name":"rsv2","uniquename":"SJAG_00304"},{"name":"hhf3","uniquename":"SJAG_00303"},{"name":"hht3","uniquename":"SJAG_00302"},{"name":"rav1","uniquename":"SJAG_00301"},{"name":"ubc15","uniquename":"SJAG_00300"},{"name":"emp70","uniquename":"SJAG_00299"},{"name":"pci2","uniquename":"SJAG_00298"},{"name":"pmc4","uniquename":"SJAG_00297"},{"name":"ncs1","uniquename":"SJAG_00296"},{"name":"gpi18","uniquename":"SJAG_00295"}],"genes_by_uniquename":{"HGNC:12482":null,"SJAG_00300":null,"SPBC1105.09":null,"YDR054C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Ubiquitin-conjugating enzyme","id":"PF00179","interpro_description":"Ubiquitin-conjugating enzyme E2, catalytic core domain","interpro_id":"IPR000608","interpro_name":"UBQ-conjugat_E2_core","locations":[{"end":124,"start":9}],"match_end":124,"match_start":9,"name":"UQ_con"},{"dbname":"CDD","description":"UBCc_UBE2G1","id":"cd23795","locations":[{"end":123,"start":5}],"match_end":123,"match_start":5,"name":"UBCc_UBE2G1"},{"dbname":"PROSITE_PATTERNS","description":"Ubiquitin-conjugating (UBC) active site signature.","id":"PS00183","interpro_description":"Ubiquitin-conjugating enzyme, active site","interpro_id":"IPR023313","interpro_name":"UBQ-conjugating_AS","locations":[{"end":93,"start":78}],"match_end":93,"match_start":78,"name":"UBC_1"},{"dbname":"PROSITE_PROFILES","description":"Ubiquitin-conjugating (UBC) core domain profile.","id":"PS50127","interpro_description":"Ubiquitin-conjugating enzyme E2, catalytic core domain","interpro_id":"IPR000608","interpro_name":"UBQ-conjugat_E2_core","locations":[{"end":165,"start":4}],"match_end":165,"match_start":4,"name":"UBC_2"},{"dbname":"SMART","id":"SM00212","locations":[{"end":157,"start":7}],"match_end":157,"match_start":7,"name":"ubc_7"},{"dbname":"FUNFAM","description":"ubiquitin-conjugating enzyme E2 R2-like","id":"G3DSA:3.10.110.10:FF:000051","locations":[{"end":153,"start":2}],"match_end":153,"match_start":2},{"dbname":"SUPERFAMILY","id":"SSF54495","interpro_description":"Ubiquitin-conjugating enzyme/RWD-like","interpro_id":"IPR016135","interpro_name":"UBQ-conjugating_enzyme/RWD","locations":[{"end":124,"start":4}],"match_end":124,"match_start":4,"name":"UBC-like"},{"dbname":"GENE3D","id":"G3DSA:3.10.110.10","interpro_description":"Ubiquitin-conjugating enzyme/RWD-like","interpro_id":"IPR016135","interpro_name":"UBQ-conjugating_enzyme/RWD","locations":[{"end":142,"start":2}],"match_end":142,"match_start":2,"name":"Ubiquitin Conjugating Enzyme"},{"dbname":"PANTHER","id":"PTHR24067","interpro_description":"Ubiquitin-conjugating enzyme","interpro_id":"IPR050113","interpro_name":"Ub_conjugating_enzyme","locations":[{"end":125,"start":6}],"match_end":125,"match_start":6,"name":"UBIQUITIN-CONJUGATING ENZYME E2"}],"location":{"chromosome_name":"supercont5.1","end_pos":3629127,"start_pos":3628282,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":138,"start":127}}],"name":"ubc15","ortholog_annotations":[{"gene_uniquename":"SJAG_00300","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:12482","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00300","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1105.09","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00300","ortholog_taxonid":4932,"ortholog_uniquename":"YDR054C","reference_uniquename":"PMID:29761456"}],"product":"ubiquitin conjugating enzyme E2 Ubc15","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005524"],"not-binding":["GO:0061631"]}},"subset_termids":["GO:0016746","GO:0030163","GO:0005634","GO:0140096","GO:0019787"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005524":null,"GO:0005634":null,"GO:0043161":null,"GO:0061631":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00300.1"],"transcripts_by_uniquename":{"SJAG_00300.1":null},"uniprot_identifier":"B6JV93","uniquename":"SJAG_00300"}


id: SJAG_00301
data:
  {"cv_annotations":{"biological_process":[{"annotations":[103801],"is_not":false,"summary":null,"term":"GO:0045324"},{"annotations":[74521],"is_not":false,"summary":null,"term":"GO:0007035"},{"annotations":[103803],"is_not":false,"summary":null,"term":"GO:0070072"}],"cellular_component":[{"annotations":[103797],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[103798],"is_not":false,"summary":null,"term":"GO:0010008"},{"annotations":[103799],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[74520],"is_not":false,"summary":null,"term":"GO:0043291"}],"molecular_function":[{"annotations":[103804],"is_not":false,"summary":null,"term":"GO:0044877"}],"mondo":[{"annotations":[88660],"is_not":false,"summary":null,"term":"MONDO:0032858"},{"annotations":[87138],"is_not":false,"summary":null,"term":"MONDO:0033258"},{"annotations":[88491],"is_not":false,"summary":null,"term":"MONDO:0014497"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB05295","InterPro:IPR015943","InterPro:IPR022033","InterPro:IPR036322","GOA:B6JV94","EnsemblGenomes-Gn:SJAG_00301","UniProtKB/TrEMBL:B6JV94","InterPro:IPR001680"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":1293,"start":1252}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rpr2","uniquename":"SJAG_00306"},{"name":"htd2","uniquename":"SJAG_00305"},{"name":"rsv2","uniquename":"SJAG_00304"},{"name":"hhf3","uniquename":"SJAG_00303"},{"name":"hht3","uniquename":"SJAG_00302"},{"name":"rav1","uniquename":"SJAG_00301"},{"name":"ubc15","uniquename":"SJAG_00300"},{"name":"emp70","uniquename":"SJAG_00299"},{"name":"pci2","uniquename":"SJAG_00298"},{"name":"pmc4","uniquename":"SJAG_00297"},{"name":"ncs1","uniquename":"SJAG_00296"}],"genes_by_uniquename":{"HGNC:2937":null,"HGNC:2938":null,"SJAG_00301":null,"SPBC1105.10":null,"YJR033C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"RAVE protein 1 C terminal","id":"PF12234","interpro_description":"RAVE complex protein Rav1 C-terminal","interpro_id":"IPR022033","interpro_name":"Rav1p_C","locations":[{"end":1243,"start":574}],"match_end":1243,"match_start":574,"name":"Rav1p_C"},{"dbname":"SMART","id":"SM00320","interpro_description":"WD40 repeat","interpro_id":"IPR001680","interpro_name":"WD40_rpt","locations":[{"end":80,"start":43},{"end":225,"start":178},{"end":420,"start":381},{"end":730,"start":693}],"match_end":730,"match_start":43,"name":"WD40_4"},{"dbname":"SUPERFAMILY","id":"SSF50978","interpro_description":"WD40-repeat-containing domain superfamily","interpro_id":"IPR036322","interpro_name":"WD40_repeat_dom_sf","locations":[{"end":230,"start":33},{"end":517,"start":285},{"end":725,"start":534}],"match_end":725,"match_start":33,"name":"WD40 repeat-like"},{"dbname":"GENE3D","id":"G3DSA:2.130.10.10","interpro_description":"WD40/YVTN repeat-like-containing domain superfamily","interpro_id":"IPR015943","interpro_name":"WD40/YVTN_repeat-like_dom_sf","locations":[{"end":243,"start":28},{"end":542,"start":373}],"match_end":542,"match_start":28},{"dbname":"PANTHER","id":"PTHR13950","interpro_description":"DmX-like/RAVE complex component","interpro_id":"IPR052208","interpro_name":"DmX-like/RAVE_component","locations":[{"end":1282,"start":20}],"match_end":1282,"match_start":20,"name":"RABCONNECTIN-RELATED"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":1293,"start":1252}],"match_end":1293,"match_start":1252,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":1291,"start":1273}],"match_end":1291,"match_start":1273,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":1271,"start":1252}],"match_end":1271,"match_start":1252,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3627773,"start_pos":3623742,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":641,"start":631}},{"range":{"end":786,"start":773}},{"range":{"end":1161,"start":1148}},{"range":{"end":1290,"start":1272}}],"name":"rav1","ortholog_annotations":[{"gene_uniquename":"SJAG_00301","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:2937","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00301","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:2938","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00301","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1105.10","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00301","ortholog_taxonid":4932,"ortholog_uniquename":"YJR033C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00301","ortholog_taxonid":4932,"ortholog_uniquename":"YJR033C","reference_uniquename":"PMID:26896847"}],"product":"RAVE complex subunit Rav1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0044877"]}},"subset_termids":["GO:0005829","MONDO:0019497","GO:0016192","MONDO:0700092","GO:0031410","MONDO:0005027","GO:0005768","GO:0005634","GO:0065003","MONDO:0000426"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null,"GO:0007035":null,"GO:0010008":null,"GO:0043291":null,"GO:0044877":null,"GO:0045324":null,"GO:0070072":null,"MONDO:0014497":null,"MONDO:0032858":null,"MONDO:0033258":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00301.1"],"transcripts_by_uniquename":{"SJAG_00301.1":null},"uniprot_identifier":"B6JV94","uniquename":"SJAG_00301"}


id: SJAG_00302
data:
  {"cv_annotations":{"biological_process":[{"annotations":[64640],"is_not":false,"summary":null,"term":"GO:0006974"},{"annotations":[64636],"is_not":false,"summary":null,"term":"GO:0033696"},{"annotations":[64638],"is_not":false,"summary":null,"term":"GO:1990758"},{"annotations":[64639],"is_not":false,"summary":null,"term":"GO:0031508"}],"cellular_component":[{"annotations":[121421],"is_not":false,"summary":null,"term":"GO:0140573"},{"annotations":[64635],"is_not":false,"summary":null,"term":"GO:0031934"},{"annotations":[114456],"is_not":false,"summary":null,"term":"GO:0140602"},{"annotations":[64637],"is_not":false,"summary":null,"term":"GO:0005721"},{"annotations":[64633],"is_not":false,"summary":null,"term":"GO:0140720"}],"molecular_function":[{"annotations":[64634],"is_not":false,"summary":null,"term":"GO:0140463"},{"annotations":[64630],"is_not":false,"summary":null,"term":"GO:0003677"},{"annotations":[64631],"is_not":false,"summary":null,"term":"GO:0030527"}],"mondo":[{"annotations":[88908],"is_not":false,"summary":null,"term":"MONDO:0030606"},{"annotations":[88911],"is_not":false,"summary":null,"term":"MONDO:0030607"}]},"dbxrefs":["GOA:B6JV95","InterPro:IPR007125","InterPro:IPR009072","UniProtKB/TrEMBL:B6JV95","EnsemblGenomes-Gn:SJAG_00302","InterPro:IPR000164","EnsemblGenomes-Tr:EEB05296"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":48,"start":1}}],"feature_publications":[{"reference_uniquename":"PMID:24184107","source":"canto"}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cnp1","uniquename":"SJAG_00307"},{"name":"rpr2","uniquename":"SJAG_00306"},{"name":"htd2","uniquename":"SJAG_00305"},{"name":"rsv2","uniquename":"SJAG_00304"},{"name":"hhf3","uniquename":"SJAG_00303"},{"name":"hht3","uniquename":"SJAG_00302"},{"name":"rav1","uniquename":"SJAG_00301"},{"name":"ubc15","uniquename":"SJAG_00300"},{"name":"emp70","uniquename":"SJAG_00299"},{"name":"pci2","uniquename":"SJAG_00298"},{"name":"pmc4","uniquename":"SJAG_00297"}],"genes_by_uniquename":{"HGNC:20503":null,"HGNC:20505":null,"HGNC:25311":null,"HGNC:32060":null,"HGNC:4764":null,"HGNC:4765":null,"HGNC:4766":null,"HGNC:4768":null,"HGNC:4769":null,"HGNC:4771":null,"HGNC:4772":null,"HGNC:4773":null,"HGNC:4774":null,"HGNC:4775":null,"HGNC:4778":null,"SJAG_00302":null,"SPBC1105.11c":null,"SPBC8D2.04":null,"YBR010W":null,"YNL031C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Core histone H2A/H2B/H3/H4","id":"PF00125","interpro_description":"Histone H2A/H2B/H3","interpro_id":"IPR007125","interpro_name":"Histone_H2A/H2B/H3","locations":[{"end":133,"start":7}],"match_end":133,"match_start":7,"name":"Histone"},{"dbname":"CDD","description":"HFD_H3","id":"cd22911","locations":[{"end":134,"start":41}],"match_end":134,"match_start":41,"name":"HFD_H3"},{"dbname":"PROSITE_PATTERNS","description":"Histone H3 signature 1.","id":"PS00322","interpro_description":"Histone H3/CENP-A","interpro_id":"IPR000164","interpro_name":"Histone_H3/CENP-A","locations":[{"end":21,"start":15}],"match_end":21,"match_start":15,"name":"HISTONE_H3_1"},{"dbname":"PROSITE_PATTERNS","description":"Histone H3 signature 2.","id":"PS00959","interpro_description":"Histone H3/CENP-A","interpro_id":"IPR000164","interpro_name":"Histone_H3/CENP-A","locations":[{"end":76,"start":68}],"match_end":76,"match_start":68,"name":"HISTONE_H3_2"},{"dbname":"SMART","id":"SM00428","interpro_description":"Histone H3/CENP-A","interpro_id":"IPR000164","interpro_name":"Histone_H3/CENP-A","locations":[{"end":137,"start":35}],"match_end":137,"match_start":35,"name":"h35"},{"dbname":"PRINTS","description":"Histone H3 signature","id":"PR00622","interpro_description":"Histone H3/CENP-A","interpro_id":"IPR000164","interpro_name":"Histone_H3/CENP-A","locations":[{"end":31,"start":3},{"end":56,"start":35},{"end":76,"start":59},{"end":136,"start":81}],"match_end":136,"match_start":3,"name":"HISTONEH3"},{"dbname":"FUNFAM","description":"Histone H3","id":"G3DSA:1.10.20.10:FF:000010","locations":[{"end":137,"start":2}],"match_end":137,"match_start":2},{"dbname":"SUPERFAMILY","id":"SSF47113","interpro_description":"Histone-fold","interpro_id":"IPR009072","interpro_name":"Histone-fold","locations":[{"end":134,"start":2}],"match_end":134,"match_start":2,"name":"Histone-fold"},{"dbname":"GENE3D","id":"G3DSA:1.10.20.10","interpro_description":"Histone-fold","interpro_id":"IPR009072","interpro_name":"Histone-fold","locations":[{"end":137,"start":2}],"match_end":137,"match_start":2,"name":"Histone, subunit A"},{"dbname":"PANTHER","id":"PTHR11426","interpro_description":"Histone H3/CENP-A","interpro_id":"IPR000164","interpro_name":"Histone_H3/CENP-A","locations":[{"end":136,"start":1}],"match_end":136,"match_start":1,"name":"HISTONE H3"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":48,"start":1}],"match_end":48,"match_start":1,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3623163,"start_pos":3622750,"strand":"forward"},"name":"hht3","ortholog_annotations":[{"gene_uniquename":"SJAG_00302","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:20503","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00302","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:20503","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00302","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:20505","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00302","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:20505","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00302","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:25311","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00302","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:25311","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00302","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:32060","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00302","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:32060","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00302","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4764","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00302","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4764","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00302","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4765","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00302","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4765","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00302","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4766","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00302","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4766","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00302","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4768","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00302","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4768","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00302","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4769","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00302","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4769","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00302","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4771","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00302","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4771","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00302","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4772","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00302","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4772","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00302","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4773","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00302","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4773","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00302","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4774","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00302","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4774","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00302","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4775","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00302","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4775","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00302","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4778","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00302","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4778","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00302","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1105.11c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00302","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC8D2.04","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_00302","ortholog_taxonid":4932,"ortholog_uniquename":"YBR010W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00302","ortholog_taxonid":4932,"ortholog_uniquename":"YBR010W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00302","ortholog_taxonid":4932,"ortholog_uniquename":"YBR010W","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_00302","ortholog_taxonid":4932,"ortholog_uniquename":"YNL031C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00302","ortholog_taxonid":4932,"ortholog_uniquename":"YNL031C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00302","ortholog_taxonid":4932,"ortholog_uniquename":"YNL031C","reference_uniquename":"PMID:26896847"}],"product":"histone H3 h3.3","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"GO_REF:0000117":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:24184107":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003677"],"not-binding":["GO:0030527","GO:0140463"]}},"subset_termids":["GO:0000070","GO:0060090","GO:0005198","GO:0006325","GO:0005694","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003677":null,"GO:0005721":null,"GO:0006974":null,"GO:0030527":null,"GO:0031508":null,"GO:0031934":null,"GO:0033696":null,"GO:0140463":null,"GO:0140573":null,"GO:0140602":null,"GO:0140720":null,"GO:1990758":null,"MONDO:0030606":null,"MONDO:0030607":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00302.1"],"transcripts_by_uniquename":{"SJAG_00302.1":null},"uniprot_identifier":"B6JV95","uniquename":"SJAG_00302"}


id: SJAG_00303
data:
  {"cv_annotations":{"biological_process":[{"annotations":[75008],"is_not":false,"summary":null,"term":"GO:0006334"}],"cellular_component":[{"annotations":[61642],"is_not":false,"summary":null,"term":"GO:0000786"},{"annotations":[75007],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[114441],"is_not":false,"summary":null,"term":"GO:0140463"},{"annotations":[61643],"is_not":false,"summary":null,"term":"GO:0003677"},{"annotations":[75009],"is_not":false,"summary":null,"term":"GO:0030527"}],"mondo":[{"annotations":[88935],"is_not":false,"summary":null,"term":"MONDO:0030729"},{"annotations":[88930],"is_not":false,"summary":null,"term":"MONDO:0030730"},{"annotations":[88620],"is_not":false,"summary":null,"term":"MONDO:0030993"},{"annotations":[88623],"is_not":false,"summary":null,"term":"MONDO:0031000"}]},"dbxrefs":["GOA:B6JV96","PDB:4XYI","InterPro:IPR035425","InterPro:IPR001951","UniProtKB/TrEMBL:B6JV96","InterPro:IPR009072","EnsemblGenomes-Gn:SJAG_00303","EnsemblGenomes-Tr:EEB05297","InterPro:IPR019809"],"deletion_viability":"unknown","feature_publications":[{"reference_uniquename":"PMID:26343758","source":"canto"}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","flags":["is_histone"],"gene_neighbourhood":[{"name":"pth3","uniquename":"SJAG_00308"},{"name":"cnp1","uniquename":"SJAG_00307"},{"name":"rpr2","uniquename":"SJAG_00306"},{"name":"htd2","uniquename":"SJAG_00305"},{"name":"rsv2","uniquename":"SJAG_00304"},{"name":"hhf3","uniquename":"SJAG_00303"},{"name":"hht3","uniquename":"SJAG_00302"},{"name":"rav1","uniquename":"SJAG_00301"},{"name":"ubc15","uniquename":"SJAG_00300"},{"name":"emp70","uniquename":"SJAG_00299"},{"name":"pci2","uniquename":"SJAG_00298"}],"genes_by_uniquename":{"HGNC:20510":null,"HGNC:4781":null,"HGNC:4782":null,"HGNC:4783":null,"HGNC:4784":null,"HGNC:4785":null,"HGNC:4787":null,"HGNC:4788":null,"HGNC:4789":null,"HGNC:4790":null,"HGNC:4791":null,"HGNC:4792":null,"HGNC:4793":null,"HGNC:4794":null,"SJAG_00303":null,"SPAC1834.03c":null,"SPBC1105.12":null,"SPBC8D2.03c":null,"YBR009C":null,"YNL030W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Centromere kinetochore component CENP-T histone fold","id":"PF15511","interpro_description":"CENP-T/Histone H4, histone fold","interpro_id":"IPR035425","interpro_name":"CENP-T/H4_C","locations":[{"end":96,"start":33}],"match_end":96,"match_start":33,"name":"CENP-T_C"},{"dbname":"CDD","description":"HFD_H4","id":"cd22912","interpro_description":"Histone H4","interpro_id":"IPR001951","interpro_name":"Histone_H4","locations":[{"end":100,"start":22}],"match_end":100,"match_start":22,"name":"HFD_H4"},{"dbname":"PROSITE_PATTERNS","description":"Histone H4 signature.","id":"PS00047","interpro_description":"Histone H4, conserved site","interpro_id":"IPR019809","interpro_name":"Histone_H4_CS","locations":[{"end":19,"start":15}],"match_end":19,"match_start":15,"name":"HISTONE_H4"},{"dbname":"SMART","id":"SM00417","interpro_description":"Histone H4","interpro_id":"IPR001951","interpro_name":"Histone_H4","locations":[{"end":90,"start":16}],"match_end":90,"match_start":16,"name":"h44"},{"dbname":"PRINTS","description":"Histone H4 signature","id":"PR00623","interpro_description":"Histone H4","interpro_id":"IPR001951","interpro_name":"Histone_H4","locations":[{"end":16,"start":5},{"end":60,"start":20},{"end":100,"start":62}],"match_end":100,"match_start":5,"name":"HISTONEH4"},{"dbname":"FUNFAM","description":"Histone H4","id":"G3DSA:1.10.20.10:FF:000007","locations":[{"end":103,"start":2}],"match_end":103,"match_start":2},{"dbname":"SUPERFAMILY","id":"SSF47113","interpro_description":"Histone-fold","interpro_id":"IPR009072","interpro_name":"Histone-fold","locations":[{"end":102,"start":3}],"match_end":102,"match_start":3,"name":"Histone-fold"},{"dbname":"GENE3D","id":"G3DSA:1.10.20.10","interpro_description":"Histone-fold","interpro_id":"IPR009072","interpro_name":"Histone-fold","locations":[{"end":103,"start":2}],"match_end":103,"match_start":2,"name":"Histone, subunit A"},{"dbname":"PANTHER","id":"PTHR10484","interpro_description":"Histone H4","interpro_id":"IPR001951","interpro_name":"Histone_H4","locations":[{"end":102,"start":1}],"match_end":102,"match_start":1,"name":"HISTONE H4"}],"location":{"chromosome_name":"supercont5.1","end_pos":3622417,"start_pos":3622106,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":20,"start":2}}],"name":"hhf3","ortholog_annotations":[{"gene_uniquename":"SJAG_00303","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:20510","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00303","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:20510","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00303","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:20510","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00303","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4781","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00303","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4781","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00303","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4781","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00303","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4782","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00303","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4782","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00303","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4782","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00303","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4783","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00303","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4783","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00303","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4783","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00303","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4784","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00303","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4784","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00303","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4784","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00303","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4785","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00303","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4785","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00303","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4785","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00303","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4787","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00303","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4787","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00303","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4787","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00303","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4788","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00303","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4788","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00303","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4788","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00303","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4789","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00303","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4789","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00303","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4789","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00303","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4790","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00303","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4790","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00303","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4790","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00303","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4791","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00303","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4791","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00303","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4791","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00303","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4792","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00303","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4792","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00303","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4792","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00303","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4793","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00303","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4793","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00303","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4793","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00303","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4794","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00303","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4794","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00303","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4794","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00303","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1834.03c"},{"gene_uniquename":"SJAG_00303","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1105.12"},{"gene_uniquename":"SJAG_00303","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC8D2.03c"},{"gene_uniquename":"SJAG_00303","ortholog_taxonid":4932,"ortholog_uniquename":"YBR009C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00303","ortholog_taxonid":4932,"ortholog_uniquename":"YBR009C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00303","ortholog_taxonid":4932,"ortholog_uniquename":"YBR009C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00303","ortholog_taxonid":4932,"ortholog_uniquename":"YNL030W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00303","ortholog_taxonid":4932,"ortholog_uniquename":"YNL030W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00303","ortholog_taxonid":4932,"ortholog_uniquename":"YNL030W","reference_uniquename":"PMID:29761456"}],"product":"histone H4 h4.3","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:26343758":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003677"],"not-binding":["GO:0030527","GO:0140463"]}},"subset_termids":["GO:0006325","GO:0005198","GO:0065003","GO:0060090","GO:0005634","GO:0005694"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000786":null,"GO:0003677":null,"GO:0005634":null,"GO:0006334":null,"GO:0030527":null,"GO:0140463":null,"MONDO:0030729":null,"MONDO:0030730":null,"MONDO:0030993":null,"MONDO:0031000":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00303.1"],"transcripts_by_uniquename":{"SJAG_00303.1":null},"uniprot_identifier":"B6JV96","uniquename":"SJAG_00303"}


id: SJAG_00304
data:
  {"cv_annotations":{"biological_process":[{"annotations":[103866],"is_not":false,"summary":null,"term":"GO:0010637"},{"annotations":[103867],"is_not":false,"summary":null,"term":"GO:0006357"}],"cellular_component":[{"annotations":[103865],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[103868],"is_not":false,"summary":null,"term":"GO:0000981"},{"annotations":[103869],"is_not":false,"summary":null,"term":"GO:0000978"},{"annotations":[69369],"is_not":false,"summary":null,"term":"GO:0008270"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB05298","UniProtKB/TrEMBL:B6JV97","EnsemblGenomes-Gn:SJAG_00304","GOA:B6JV97","InterPro:IPR013087","InterPro:IPR036236"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":31,"start":1}},{"range":{"end":313,"start":227}},{"range":{"end":458,"start":388}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"adi1","uniquename":"SJAG_00309"},{"name":"pth3","uniquename":"SJAG_00308"},{"name":"cnp1","uniquename":"SJAG_00307"},{"name":"rpr2","uniquename":"SJAG_00306"},{"name":"htd2","uniquename":"SJAG_00305"},{"name":"rsv2","uniquename":"SJAG_00304"},{"name":"hhf3","uniquename":"SJAG_00303"},{"name":"hht3","uniquename":"SJAG_00302"},{"name":"rav1","uniquename":"SJAG_00301"},{"name":"ubc15","uniquename":"SJAG_00300"},{"name":"emp70","uniquename":"SJAG_00299"}],"genes_by_uniquename":{"SJAG_00304":null,"SPBC1105.14":null,"YDL020C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Zinc finger, C2H2 type","id":"PF00096","interpro_description":"Zinc finger C2H2-type","interpro_id":"IPR013087","interpro_name":"Znf_C2H2_type","locations":[{"end":564,"start":539}],"match_end":564,"match_start":539,"name":"zf-C2H2"},{"dbname":"PROSITE_PROFILES","description":"Zinc finger C2H2 type domain profile.","id":"PS50157","interpro_description":"Zinc finger C2H2-type","interpro_id":"IPR013087","interpro_name":"Znf_C2H2_type","locations":[{"end":537,"start":501}],"match_end":537,"match_start":501,"name":"ZINC_FINGER_C2H2_2"},{"dbname":"SMART","id":"SM00355","interpro_description":"Zinc finger C2H2-type","interpro_id":"IPR013087","interpro_name":"Znf_C2H2_type","locations":[{"end":532,"start":512},{"end":564,"start":539}],"match_end":564,"match_start":512,"name":"c2h2final6"},{"dbname":"SUPERFAMILY","id":"SSF57667","interpro_description":"Zinc finger C2H2 superfamily","interpro_id":"IPR036236","interpro_name":"Znf_C2H2_sf","locations":[{"end":561,"start":512}],"match_end":561,"match_start":512,"name":"beta-beta-alpha zinc fingers"},{"dbname":"GENE3D","id":"G3DSA:3.30.160.60","locations":[{"end":566,"start":476}],"match_end":566,"match_start":476,"name":"Classic Zinc Finger"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":31,"start":1},{"end":313,"start":227},{"end":458,"start":388}],"match_end":458,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":294,"start":284},{"end":419,"start":388}],"match_end":419,"match_start":284,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":20,"start":1}],"match_end":20,"match_start":1,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3620420,"start_pos":3618720,"strand":"reverse"},"name":"rsv2","ortholog_annotations":[{"gene_uniquename":"SJAG_00304","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1105.14","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00304","ortholog_taxonid":4932,"ortholog_uniquename":"YDL020C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00304","ortholog_taxonid":4932,"ortholog_uniquename":"YDL020C","reference_uniquename":"PMID:26896847"}],"product":"DNA-binding transcription factor Rsv2","references_by_uniquename":{"GO_REF:0000043":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0008270","GO:0000978"],"not-binding":["GO:0000981"]}},"subset_termids":["GO:0005634","GO:0006355","GO:0007005","GO:0003700","GO:0006351"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000978":null,"GO:0000981":null,"GO:0005634":null,"GO:0006357":null,"GO:0008270":null,"GO:0010637":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00304.1"],"transcripts_by_uniquename":{"SJAG_00304.1":null},"uniprot_identifier":"B6JV97","uniquename":"SJAG_00304"}


id: SJAG_00305
data:
  {"cv_annotations":{"biological_process":[{"annotations":[103872],"is_not":false,"summary":null,"term":"GO:0006633"}],"cellular_component":[{"annotations":[76363],"is_not":false,"summary":null,"term":"GO:0005739"}],"molecular_function":[{"annotations":[76364],"is_not":false,"summary":null,"term":"GO:0019171"}]},"dbxrefs":["InterPro:IPR029069","EnsemblGenomes-Gn:SJAG_00305","UniProtKB/TrEMBL:B6JV98","EnsemblGenomes-Tr:EEB05299"],"deletion_viability":"unknown","feature_publications":[{"reference_uniquename":"PMID:31956022","source":"canto"}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_00310"},{"name":"adi1","uniquename":"SJAG_00309"},{"name":"pth3","uniquename":"SJAG_00308"},{"name":"cnp1","uniquename":"SJAG_00307"},{"name":"rpr2","uniquename":"SJAG_00306"},{"name":"htd2","uniquename":"SJAG_00305"},{"name":"rsv2","uniquename":"SJAG_00304"},{"name":"hhf3","uniquename":"SJAG_00303"},{"name":"hht3","uniquename":"SJAG_00302"},{"name":"rav1","uniquename":"SJAG_00301"},{"name":"ubc15","uniquename":"SJAG_00300"}],"genes_by_uniquename":{"SJAG_00305":null,"SPBC1105.15c":null,"YHR067W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"SUPERFAMILY","id":"SSF54637","interpro_description":"HotDog domain superfamily","interpro_id":"IPR029069","interpro_name":"HotDog_dom_sf","locations":[{"end":254,"start":166}],"match_end":254,"match_start":166,"name":"Thioesterase/thiol ester dehydrase-isomerase"},{"dbname":"GENE3D","id":"G3DSA:3.10.129.10","locations":[{"end":276,"start":163}],"match_end":276,"match_start":163,"name":"Hotdog Thioesterase"},{"dbname":"PANTHER","id":"PTHR28152","interpro_description":"Mitochondrial Hydroxyacyl-thioester Dehydratase","interpro_id":"IPR052741","interpro_name":"Mitochondrial_HTD2","locations":[{"end":281,"start":7}],"match_end":281,"match_start":7,"name":"HYDROXYACYL-THIOESTER DEHYDRATASE TYPE 2, MITOCHONDRIAL"}],"location":{"chromosome_name":"supercont5.1","end_pos":3618279,"start_pos":3617431,"strand":"forward"},"name":"htd2","ortholog_annotations":[{"gene_uniquename":"SJAG_00305","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1105.15c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00305","ortholog_taxonid":4932,"ortholog_uniquename":"YHR067W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00305","ortholog_taxonid":4932,"ortholog_uniquename":"YHR067W","reference_uniquename":"PMID:26896847"}],"product":"3-hydroxyacyl-ACP dehydratase Htd2","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null,"PMID:31956022":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0019171"]}},"subset_termids":["GO:0006629","GO:0016829","GO:0005739"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005739":null,"GO:0006633":null,"GO:0019171":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00305.1"],"transcripts_by_uniquename":{"SJAG_00305.1":null},"uniprot_identifier":"B6JV98","uniquename":"SJAG_00305"}


id: SJAG_00306
data:
  {"cv_annotations":{"biological_process":[{"annotations":[73151],"is_not":false,"summary":null,"term":"GO:0008033"}],"cellular_component":[{"annotations":[103874],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[73150],"is_not":false,"summary":null,"term":"GO:0005655"}],"molecular_function":[{"annotations":[103878],"is_not":false,"summary":null,"term":"GO:0004526"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JV99","EnsemblGenomes-Tr:EEB05300","InterPro:IPR007175","EnsemblGenomes-Gn:SJAG_00306"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":127,"start":102}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"noc3","uniquename":"SJAG_00311"},{"uniquename":"SJAG_00310"},{"name":"adi1","uniquename":"SJAG_00309"},{"name":"pth3","uniquename":"SJAG_00308"},{"name":"cnp1","uniquename":"SJAG_00307"},{"name":"rpr2","uniquename":"SJAG_00306"},{"name":"htd2","uniquename":"SJAG_00305"},{"name":"rsv2","uniquename":"SJAG_00304"},{"name":"hhf3","uniquename":"SJAG_00303"},{"name":"hht3","uniquename":"SJAG_00302"},{"name":"rav1","uniquename":"SJAG_00301"}],"genes_by_uniquename":{"HGNC:21300":null,"SJAG_00306":null,"SPBC1105.16c":null,"YIR015W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"RNAse P Rpr2/Rpp21/SNM1 subunit domain","id":"PF04032","interpro_description":"Ribonuclease P subunit, Rpr2/Snm1/Rpp21","interpro_id":"IPR007175","interpro_name":"Rpr2/Snm1/Rpp21","locations":[{"end":95,"start":9}],"match_end":95,"match_start":9,"name":"Rpr2"},{"dbname":"GENE3D","id":"G3DSA:6.20.50.20","locations":[{"end":112,"start":54}],"match_end":112,"match_start":54},{"dbname":"PANTHER","id":"PTHR14742","locations":[{"end":120,"start":3}],"match_end":120,"match_start":3,"name":"RIBONUCLEASE P SUBUNIT P21"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":127,"start":102}],"match_end":127,"match_start":102,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3617041,"start_pos":3616658,"strand":"reverse"},"name":"rpr2","ortholog_annotations":[{"gene_uniquename":"SJAG_00306","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:21300","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00306","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1105.16c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00306","ortholog_taxonid":4932,"ortholog_uniquename":"YIR015W","reference_uniquename":"PMID:29761456"}],"product":"RNase P subunit Rpr2","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0004526"]}},"subset_termids":["GO:0140098","GO:0006399","GO:0016788","GO:0005634","GO:0005730","GO:0005829","GO:0140101"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004526":null,"GO:0005655":null,"GO:0005829":null,"GO:0008033":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00306.1"],"transcripts_by_uniquename":{"SJAG_00306.1":null},"uniprot_identifier":"B6JV99","uniquename":"SJAG_00306"}


id: SJAG_00307
data:
  {"cv_annotations":{"biological_process":[{"annotations":[103886],"is_not":false,"summary":null,"term":"GO:0034080"}],"cellular_component":[{"annotations":[103880],"is_not":false,"summary":null,"term":"GO:0043505"},{"annotations":[103884],"is_not":false,"summary":null,"term":"GO:0000779"},{"annotations":[73751],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[103887],"is_not":false,"summary":null,"term":"GO:0019237"},{"annotations":[60013],"is_not":false,"summary":null,"term":"GO:0030527"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_00307","EnsemblGenomes-Tr:EEB05301","GOA:B6JVA0","InterPro:IPR007125","InterPro:IPR009072","UniProtKB/TrEMBL:B6JVA0","InterPro:IPR000164"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"lub1","uniquename":"SJAG_00312"},{"name":"noc3","uniquename":"SJAG_00311"},{"uniquename":"SJAG_00310"},{"name":"adi1","uniquename":"SJAG_00309"},{"name":"pth3","uniquename":"SJAG_00308"},{"name":"cnp1","uniquename":"SJAG_00307"},{"name":"rpr2","uniquename":"SJAG_00306"},{"name":"htd2","uniquename":"SJAG_00305"},{"name":"rsv2","uniquename":"SJAG_00304"},{"name":"hhf3","uniquename":"SJAG_00303"},{"name":"hht3","uniquename":"SJAG_00302"}],"genes_by_uniquename":{"HGNC:1851":null,"SJAG_00307":null,"SPBC1105.17":null,"YKL049C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Core histone H2A/H2B/H3/H4","id":"PF00125","interpro_description":"Histone H2A/H2B/H3","interpro_id":"IPR007125","interpro_name":"Histone_H2A/H2B/H3","locations":[{"end":118,"start":18}],"match_end":118,"match_start":18,"name":"Histone"},{"dbname":"CDD","description":"HFD_H3","id":"cd22911","locations":[{"end":119,"start":20}],"match_end":119,"match_start":20,"name":"HFD_H3"},{"dbname":"PROSITE_PATTERNS","description":"Histone H3 signature 2.","id":"PS00959","interpro_description":"Histone H3/CENP-A","interpro_id":"IPR000164","interpro_name":"Histone_H3/CENP-A","locations":[{"end":55,"start":47}],"match_end":55,"match_start":47,"name":"HISTONE_H3_2"},{"dbname":"SMART","id":"SM00428","interpro_description":"Histone H3/CENP-A","interpro_id":"IPR000164","interpro_name":"Histone_H3/CENP-A","locations":[{"end":120,"start":14}],"match_end":120,"match_start":14,"name":"h35"},{"dbname":"PRINTS","description":"Histone H3 signature","id":"PR00622","interpro_description":"Histone H3/CENP-A","interpro_id":"IPR000164","interpro_name":"Histone_H3/CENP-A","locations":[{"end":35,"start":14},{"end":55,"start":38}],"match_end":55,"match_start":14,"name":"HISTONEH3"},{"dbname":"FUNFAM","description":"Histone H3-like centromeric protein A","id":"G3DSA:1.10.20.10:FF:000157","locations":[{"end":120,"start":2}],"match_end":120,"match_start":2},{"dbname":"SUPERFAMILY","id":"SSF47113","interpro_description":"Histone-fold","interpro_id":"IPR009072","interpro_name":"Histone-fold","locations":[{"end":119,"start":16}],"match_end":119,"match_start":16,"name":"Histone-fold"},{"dbname":"GENE3D","id":"G3DSA:1.10.20.10","interpro_description":"Histone-fold","interpro_id":"IPR009072","interpro_name":"Histone-fold","locations":[{"end":120,"start":3}],"match_end":120,"match_start":3,"name":"Histone, subunit A"},{"dbname":"PANTHER","id":"PTHR45810","interpro_description":"Histone H3/CENP-A","interpro_id":"IPR000164","interpro_name":"Histone_H3/CENP-A","locations":[{"end":119,"start":15}],"match_end":119,"match_start":15,"name":"HISTONE H3.2"}],"location":{"chromosome_name":"supercont5.1","end_pos":3616315,"start_pos":3615953,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":23,"start":14}}],"name":"cnp1","ortholog_annotations":[{"gene_uniquename":"SJAG_00307","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:1851","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00307","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1105.17","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00307","ortholog_taxonid":4932,"ortholog_uniquename":"YKL049C","reference_uniquename":"PMID:29761456"}],"product":"centromere-specific histone H3 CENP-A","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0019237"],"not-binding":["GO:0030527"]}},"subset_termids":["GO:0006325","GO:0005694","GO:0065003","GO:0005634","GO:0005198"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000779":null,"GO:0005634":null,"GO:0019237":null,"GO:0030527":null,"GO:0034080":null,"GO:0043505":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00307.1"],"transcripts_by_uniquename":{"SJAG_00307.1":null},"uniprot_identifier":"B6JVA0","uniquename":"SJAG_00307"}


id: SJAG_00308
data:
  {"cv_annotations":{"biological_process":[{"annotations":[103890],"is_not":false,"summary":null,"term":"GO:0070126"}],"cellular_component":[{"annotations":[103889],"is_not":false,"summary":null,"term":"GO:0005743"}],"molecular_function":[{"annotations":[103891],"is_not":false,"summary":null,"term":"GO:0004045"},{"annotations":[70390],"is_not":false,"summary":null,"term":"GO:0003747"}],"mondo":[{"annotations":[89056],"is_not":false,"summary":null,"term":"MONDO:0013306"},{"annotations":[87066],"is_not":false,"summary":null,"term":"MONDO:0014020"}]},"dbxrefs":["GOA:B6JVA1","EnsemblGenomes-Tr:EEB05302","EnsemblGenomes-Gn:SJAG_00308","InterPro:IPR000352","UniProtKB/TrEMBL:B6JVA1"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":144,"start":106}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cwf29","uniquename":"SJAG_00313"},{"name":"lub1","uniquename":"SJAG_00312"},{"name":"noc3","uniquename":"SJAG_00311"},{"uniquename":"SJAG_00310"},{"name":"adi1","uniquename":"SJAG_00309"},{"name":"pth3","uniquename":"SJAG_00308"},{"name":"cnp1","uniquename":"SJAG_00307"},{"name":"rpr2","uniquename":"SJAG_00306"},{"name":"htd2","uniquename":"SJAG_00305"},{"name":"rsv2","uniquename":"SJAG_00304"},{"name":"hhf3","uniquename":"SJAG_00303"}],"genes_by_uniquename":{"HGNC:26784":null,"SJAG_00308":null,"SPBC1105.18c":null,"YLR281C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"RF-1 domain","id":"PF00472","interpro_description":"Peptide chain release factor class I","interpro_id":"IPR000352","interpro_name":"Pep_chain_release_fac_I","locations":[{"end":127,"start":34}],"match_end":127,"match_start":34,"name":"RF-1"},{"dbname":"FUNFAM","description":"Peptidyl-tRNA hydrolase domain protein","id":"G3DSA:3.30.160.20:FF:000065","locations":[{"end":107,"start":10}],"match_end":107,"match_start":10},{"dbname":"SUPERFAMILY","id":"SSF75620","interpro_description":"Peptide chain release factor class I superfamily","interpro_id":"IPR045853","interpro_name":"Pep_chain_release_fac_I_sf","locations":[{"end":115,"start":22}],"match_end":115,"match_start":22,"name":"Release factor"},{"dbname":"GENE3D","id":"G3DSA:3.30.160.20","locations":[{"end":107,"start":9}],"match_end":107,"match_start":9},{"dbname":"PANTHER","id":"PTHR46203","interpro_description":"Mitochondrial Translation Release Factor","interpro_id":"IPR052405","interpro_name":"Mito_Transl_Release_Factor","locations":[{"end":140,"start":28}],"match_end":140,"match_start":28,"name":"PROBABLE PEPTIDE CHAIN RELEASE FACTOR C12ORF65"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":144,"start":106}],"match_end":144,"match_start":106,"name":"disorder_prediction"},{"dbname":"MOBIDB-Positive-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Positive-Polyelectrolyte","locations":[{"end":126,"start":114}],"match_end":126,"match_start":114,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3615841,"start_pos":3615407,"strand":"forward"},"name":"pth3","ortholog_annotations":[{"gene_uniquename":"SJAG_00308","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:26784","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00308","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1105.18c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00308","ortholog_taxonid":4932,"ortholog_uniquename":"YLR281C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00308","ortholog_taxonid":4932,"ortholog_uniquename":"YLR281C","reference_uniquename":"PMID:26896847"}],"product":"mitochondrial peptidyl-tRNA hydrolase, stalled-ribosome rescue factor srRF2, Pth3","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0004045","GO:0003747"]}},"subset_termids":["GO:0140053","GO:0005739","GO:0016788","GO:0140098","GO:0140101","MONDO:0004069","MONDO:0005559","MONDO:0005066"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003747":null,"GO:0004045":null,"GO:0005743":null,"GO:0070126":null,"MONDO:0013306":null,"MONDO:0014020":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00308.1"],"transcripts_by_uniquename":{"SJAG_00308.1":null},"uniprot_identifier":"B6JVA1","uniquename":"SJAG_00308"}


id: SJAG_00309
data:
  {"binding_sites":[{"assigned_by":"UniProtKB","ligand":"Fe(2+)","range":{"end":85,"start":85}},{"assigned_by":"UniProtKB","ligand":"Ni(2+)","range":{"end":85,"start":85}},{"assigned_by":"UniProtKB","ligand":"Fe(2+)","range":{"end":87,"start":87}},{"assigned_by":"UniProtKB","ligand":"Ni(2+)","range":{"end":87,"start":87}},{"assigned_by":"UniProtKB","ligand":"Fe(2+)","range":{"end":91,"start":91}},{"assigned_by":"UniProtKB","ligand":"Ni(2+)","range":{"end":91,"start":91}},{"assigned_by":"UniProtKB","ligand":"Fe(2+)","range":{"end":130,"start":130}},{"assigned_by":"UniProtKB","ligand":"Ni(2+)","range":{"end":130,"start":130}}],"cv_annotations":{"biological_process":[{"annotations":[59182],"is_not":false,"summary":null,"term":"GO:0019509"}],"cellular_component":[{"annotations":[114285],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[59176],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[59178],"is_not":false,"summary":null,"term":"GO:0010308"},{"annotations":[73130],"is_not":false,"summary":null,"term":"GO:0010309"},{"annotations":[59175],"is_not":false,"summary":null,"term":"GO:0005506"},{"annotations":[59180],"is_not":false,"summary":null,"term":"GO:0016151"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JVA2","GOA:B6JVA2","InterPro:IPR014710","EnsemblGenomes-Tr:EEB05303","InterPro:IPR027496","InterPro:IPR004313","EnsemblGenomes-Gn:SJAG_00309","InterPro:IPR011051"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"snx3","uniquename":"SJAG_00314"},{"name":"cwf29","uniquename":"SJAG_00313"},{"name":"lub1","uniquename":"SJAG_00312"},{"name":"noc3","uniquename":"SJAG_00311"},{"uniquename":"SJAG_00310"},{"name":"adi1","uniquename":"SJAG_00309"},{"name":"pth3","uniquename":"SJAG_00308"},{"name":"cnp1","uniquename":"SJAG_00307"},{"name":"rpr2","uniquename":"SJAG_00306"},{"name":"htd2","uniquename":"SJAG_00305"},{"name":"rsv2","uniquename":"SJAG_00304"}],"genes_by_uniquename":{"HGNC:30576":null,"SJAG_00309":null,"SPBC887.01":null,"YMR009W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"ARD/ARD' family","id":"PF03079","interpro_description":"Acireductone dioxygenase ARD family","interpro_id":"IPR004313","interpro_name":"ARD","locations":[{"end":154,"start":5}],"match_end":154,"match_start":5,"name":"ARD"},{"dbname":"CDD","description":"cupin_ARD","id":"cd02232","interpro_description":"Acireductone dioxygenase ARD family","interpro_id":"IPR004313","interpro_name":"ARD","locations":[{"end":154,"start":27}],"match_end":154,"match_start":27,"name":"cupin_ARD"},{"dbname":"FUNFAM","description":"1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase","id":"G3DSA:2.60.120.10:FF:000099","locations":[{"end":176,"start":2}],"match_end":176,"match_start":2},{"dbname":"SUPERFAMILY","id":"SSF51182","interpro_description":"RmlC-like cupin domain superfamily","interpro_id":"IPR011051","interpro_name":"RmlC_Cupin_sf","locations":[{"end":160,"start":15}],"match_end":160,"match_start":15,"name":"RmlC-like cupins"},{"dbname":"GENE3D","id":"G3DSA:2.60.120.10","interpro_description":"RmlC-like jelly roll fold","interpro_id":"IPR014710","interpro_name":"RmlC-like_jellyroll","locations":[{"end":176,"start":1}],"match_end":176,"match_start":1,"name":"Jelly Rolls"},{"dbname":"PANTHER","id":"PTHR23418","interpro_description":"Acireductone dioxygenase ARD family","interpro_id":"IPR004313","interpro_name":"ARD","locations":[{"end":174,"start":3}],"match_end":174,"match_start":3,"name":"ACIREDUCTONE DIOXYGENASE"},{"dbname":"HAMAP","description":"Acireductone dioxygenase [ADI1].","id":"MF_03154","interpro_description":"Acireductone dioxygenase, eukaryotes","interpro_id":"IPR027496","interpro_name":"ARD_euk","locations":[{"end":164,"start":3}],"match_end":164,"match_start":3,"name":"Salvage_MtnD_euk"}],"location":{"chromosome_name":"supercont5.1","end_pos":3614896,"start_pos":3614366,"strand":"reverse"},"name":"adi1","ortholog_annotations":[{"gene_uniquename":"SJAG_00309","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:30576","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00309","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC887.01","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00309","ortholog_taxonid":4932,"ortholog_uniquename":"YMR009W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00309","ortholog_taxonid":4932,"ortholog_uniquename":"YMR009W","reference_uniquename":"PMID:26896847"}],"product":"acireductone dioxygenase family Adi1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0016151","GO:0005506"],"not-binding":["GO:0010308","GO:0010309"]}},"subset_termids":["GO:0005829","GO:0006790","GO:0005634","GO:0016491","GO:0006520"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005506":null,"GO:0005634":null,"GO:0005829":null,"GO:0010308":null,"GO:0010309":null,"GO:0016151":null,"GO:0019509":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00309.1"],"transcripts_by_uniquename":{"SJAG_00309.1":null},"uniprot_identifier":"B6JVA2","uniquename":"SJAG_00309"}


id: SJAG_00310
data:
  {"chains":[{"assigned_by":"UniProtKB","range":{"end":393,"start":22}}],"cv_annotations":{"biological_process":[{"annotations":[64103],"is_not":false,"summary":null,"term":"GO:0016052"},{"annotations":[76758],"is_not":false,"summary":null,"term":"GO:0009272"},{"annotations":[104073],"is_not":false,"summary":null,"term":"GO:0000920"}],"cellular_component":[{"annotations":[104065],"is_not":false,"summary":null,"term":"GO:0005783"},{"annotations":[104067],"is_not":false,"summary":null,"term":"GO:0009897"}],"molecular_function":[{"annotations":[64104],"is_not":false,"summary":null,"term":"GO:0008496"}],"sequence":[{"annotations":[82238],"is_not":false,"summary":null,"term":"SO:0000418"}]},"dbxrefs":["InterPro:IPR014480","EnsemblGenomes-Tr:EEB05304","InterPro:IPR008928","UniProtKB/TrEMBL:B6JVA3","EnsemblGenomes-Gn:SJAG_00310","GOA:B6JVA3","InterPro:IPR005198"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mrpl38","uniquename":"SJAG_00315"},{"name":"snx3","uniquename":"SJAG_00314"},{"name":"cwf29","uniquename":"SJAG_00313"},{"name":"lub1","uniquename":"SJAG_00312"},{"name":"noc3","uniquename":"SJAG_00311"},{"uniquename":"SJAG_00310"},{"name":"adi1","uniquename":"SJAG_00309"},{"name":"pth3","uniquename":"SJAG_00308"},{"name":"cnp1","uniquename":"SJAG_00307"},{"name":"rpr2","uniquename":"SJAG_00306"},{"name":"htd2","uniquename":"SJAG_00305"}],"genes_by_uniquename":{"SJAG_00310":null,"SPBC1198.07c":null,"YKL046C":null,"YMR238W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Glycosyl hydrolase family 76","id":"PF03663","interpro_description":"Glycoside hydrolase, family 76","interpro_id":"IPR005198","interpro_name":"Glyco_hydro_76","locations":[{"end":391,"start":35}],"match_end":391,"match_start":35,"name":"Glyco_hydro_76"},{"dbname":"FUNFAM","description":"Mannan endo-1,6-alpha-mannosidase","id":"G3DSA:1.50.10.20:FF:000006","locations":[{"end":385,"start":34}],"match_end":385,"match_start":34},{"dbname":"SUPERFAMILY","id":"SSF48208","interpro_description":"Six-hairpin glycosidase superfamily","interpro_id":"IPR008928","interpro_name":"6-hairpin_glycosidase_sf","locations":[{"end":368,"start":41}],"match_end":368,"match_start":41,"name":"Six-hairpin glycosidases"},{"dbname":"GENE3D","id":"G3DSA:1.50.10.20","locations":[{"end":384,"start":35}],"match_end":384,"match_start":35},{"dbname":"PANTHER","id":"PTHR12145","interpro_description":"Mannan endo-1,6-alpha-mannosidase","interpro_id":"IPR014480","interpro_name":"Mannan-1_6-alpha_mannosidase","locations":[{"end":392,"start":7}],"match_end":392,"match_start":7,"name":"MANNAN ENDO-1,6-ALPHA-MANNOSIDASE DCW1"},{"dbname":"PIRSF","id":"PIRSF016302","interpro_description":"Mannan endo-1,6-alpha-mannosidase","interpro_id":"IPR014480","interpro_name":"Mannan-1_6-alpha_mannosidase","locations":[{"end":393,"start":1}],"match_end":393,"match_start":1,"name":"Man_a_manosd"}],"location":{"chromosome_name":"supercont5.1","end_pos":3614080,"start_pos":3612899,"strand":"forward"},"ortholog_annotations":[{"gene_uniquename":"SJAG_00310","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1198.07c","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_00310","ortholog_taxonid":4932,"ortholog_uniquename":"YKL046C","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_00310","ortholog_taxonid":4932,"ortholog_uniquename":"YMR238W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00310","ortholog_taxonid":4932,"ortholog_uniquename":"YMR238W","reference_uniquename":"PMID:26896847"}],"product":"mannan endo-1,6-alpha-mannosidase, Dfg502-like","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:26896847":null,"PMID:29761456":null,"PMID:36408920":null},"signal_peptide":{"assigned_by":"UniProtKB","evidence":"ECO:0000256","feature_type":"signal peptide","range":{"end":21,"start":1},"reference":null,"termid":"SO:0000418"},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0008496"]}},"subset_termids":["GO:0009986","GO:0005783","GO:0071554","GO:0005886","GO:0016798","GO:0005975"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000920":null,"GO:0005783":null,"GO:0008496":null,"GO:0009272":null,"GO:0009897":null,"GO:0016052":null,"SO:0000418":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00310.1"],"transcripts_by_uniquename":{"SJAG_00310.1":null},"uniprot_identifier":"B6JVA3","uniquename":"SJAG_00310"}


id: SJAG_00311
data:
  {"coiled_coil_coords":[{"range":{"end":484,"start":450}}],"cv_annotations":{"biological_process":[{"annotations":[75505],"is_not":false,"summary":null,"term":"GO:0006270"},{"annotations":[114296],"is_not":false,"summary":null,"term":"GO:0006364"}],"cellular_component":[{"annotations":[114292],"is_not":false,"summary":null,"term":"GO:0030691"},{"annotations":[75504],"is_not":false,"summary":null,"term":"GO:0005730"}],"molecular_function":[{"annotations":[75506],"is_not":false,"summary":null,"term":"GO:0003682"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JVA4","EnsemblGenomes-Gn:SJAG_00311","InterPro:IPR005612","GOA:B6JVA4","InterPro:IPR016903","InterPro:IPR011501","EnsemblGenomes-Tr:EEB05305"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":63,"start":1}},{"range":{"end":138,"start":93}},{"range":{"end":192,"start":168}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_00316"},{"name":"mrpl38","uniquename":"SJAG_00315"},{"name":"snx3","uniquename":"SJAG_00314"},{"name":"cwf29","uniquename":"SJAG_00313"},{"name":"lub1","uniquename":"SJAG_00312"},{"name":"noc3","uniquename":"SJAG_00311"},{"uniquename":"SJAG_00310"},{"name":"adi1","uniquename":"SJAG_00309"},{"name":"pth3","uniquename":"SJAG_00308"},{"name":"cnp1","uniquename":"SJAG_00307"},{"name":"rpr2","uniquename":"SJAG_00306"}],"genes_by_uniquename":{"HGNC:24034":null,"SJAG_00311":null,"SPBC887.03c":null,"YLR002C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Nucleolar complex-associated protein","id":"PF07540","interpro_description":"Nucleolar complex-associated protein 3, N-terminal","interpro_id":"IPR011501","interpro_name":"Noc3_N","locations":[{"end":305,"start":215}],"match_end":305,"match_start":215,"name":"NOC3p"},{"dbname":"PFAM","description":"CBF/Mak21 family","id":"PF03914","interpro_description":"CCAAT-binding factor","interpro_id":"IPR005612","interpro_name":"CCAAT-binding_factor","locations":[{"end":732,"start":553}],"match_end":732,"match_start":553,"name":"CBF"},{"dbname":"PANTHER","id":"PTHR14428","interpro_description":"Nucleolar complex-associated protein 3","interpro_id":"IPR016903","interpro_name":"Nucleolar_cplx-assoc_3","locations":[{"end":740,"start":31}],"match_end":740,"match_start":31,"name":"NUCLEOLAR COMPLEX PROTEIN 3"},{"dbname":"PIRSF","id":"PIRSF028977","interpro_description":"Nucleolar complex-associated protein 3","interpro_id":"IPR016903","interpro_name":"Nucleolar_cplx-assoc_3","locations":[{"end":741,"start":1}],"match_end":741,"match_start":1,"name":"Noc3"},{"dbname":"COILS","id":"Coil","locations":[{"end":484,"start":450}],"match_end":484,"match_start":450,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":63,"start":1},{"end":138,"start":93},{"end":192,"start":168}],"match_end":192,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Negative-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Negative-Polyelectrolyte","locations":[{"end":132,"start":114}],"match_end":132,"match_start":114,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":63,"start":47}],"match_end":63,"match_start":47,"name":"disorder_prediction"},{"dbname":"MOBIDB-Positive-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Positive-Polyelectrolyte","locations":[{"end":31,"start":17}],"match_end":31,"match_start":17,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3612197,"start_pos":3609878,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":32,"start":15}},{"range":{"end":55,"start":44}},{"range":{"end":127,"start":111}},{"range":{"end":188,"start":169}},{"range":{"end":468,"start":447}}],"name":"noc3","ortholog_annotations":[{"gene_uniquename":"SJAG_00311","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:24034","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00311","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC887.03c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00311","ortholog_taxonid":4932,"ortholog_uniquename":"YLR002C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00311","ortholog_taxonid":4932,"ortholog_uniquename":"YLR002C","reference_uniquename":"PMID:26896847"}],"product":"Noc2p-Noc3p complex subunit Noc3","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003682"]}},"subset_termids":["GO:0042254","GO:0005730","GO:0006260","GO:0005634","GO:0030684"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003682":null,"GO:0005730":null,"GO:0006270":null,"GO:0006364":null,"GO:0030691":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00311.1"],"transcripts_by_uniquename":{"SJAG_00311.1":null},"uniprot_identifier":"B6JVA4","uniquename":"SJAG_00311"}


id: SJAG_00312
data:
  {"cv_annotations":{"biological_process":[{"annotations":[114300],"is_not":false,"summary":null,"term":"GO:0006281"},{"annotations":[73938],"is_not":false,"summary":null,"term":"GO:0043161"},{"annotations":[73939],"is_not":false,"summary":null,"term":"GO:0010992"}],"cellular_component":[{"annotations":[73937],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[73936],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[73935],"is_not":false,"summary":null,"term":"GO:0043130"}],"mondo":[{"annotations":[87307],"is_not":false,"summary":null,"term":"MONDO:0060502"}]},"dbxrefs":["InterPro:IPR017986","UniProtKB/TrEMBL:B6JVA5","InterPro:IPR013535","InterPro:IPR038122","InterPro:IPR036322","InterPro:IPR011989","InterPro:IPR015155","InterPro:IPR020472","InterPro:IPR001680","GOA:B6JVA5","InterPro:IPR015943","InterPro:IPR033510","InterPro:IPR016024","EnsemblGenomes-Tr:EEB05306","EnsemblGenomes-Gn:SJAG_00312"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"sog2","uniquename":"SJAG_00317"},{"uniquename":"SJAG_00316"},{"name":"mrpl38","uniquename":"SJAG_00315"},{"name":"snx3","uniquename":"SJAG_00314"},{"name":"cwf29","uniquename":"SJAG_00313"},{"name":"lub1","uniquename":"SJAG_00312"},{"name":"noc3","uniquename":"SJAG_00311"},{"uniquename":"SJAG_00310"},{"name":"adi1","uniquename":"SJAG_00309"},{"name":"pth3","uniquename":"SJAG_00308"},{"name":"cnp1","uniquename":"SJAG_00307"}],"genes_by_uniquename":{"HGNC:9043":null,"SJAG_00312":null,"SPBC887.04c":null,"YKL213C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"PFU (PLAA family ubiquitin binding)","id":"PF09070","interpro_description":"PLAA family ubiquitin binding domain","interpro_id":"IPR015155","interpro_name":"PFU","locations":[{"end":442,"start":334}],"match_end":442,"match_start":334,"name":"PFU"},{"dbname":"PFAM","description":"PUL domain","id":"PF08324","interpro_description":"PUL domain","interpro_id":"IPR013535","interpro_name":"PUL_dom","locations":[{"end":715,"start":470}],"match_end":715,"match_start":470,"name":"PUL"},{"dbname":"PFAM","description":"WD domain, G-beta repeat","id":"PF00400","interpro_description":"WD40 repeat","interpro_id":"IPR001680","interpro_name":"WD40_rpt","locations":[{"end":42,"start":8},{"end":90,"start":53},{"end":130,"start":101},{"end":169,"start":133},{"end":207,"start":172},{"end":248,"start":211},{"end":287,"start":252}],"match_end":287,"match_start":8,"name":"WD40"},{"dbname":"CDD","description":"WD40","id":"cd00200","locations":[{"end":287,"start":8}],"match_end":287,"match_start":8,"name":"WD40"},{"dbname":"PROSITE_PROFILES","description":"Trp-Asp (WD) repeats circular profile.","id":"PS50294","locations":[{"end":170,"start":139},{"end":249,"start":217}],"match_end":249,"match_start":139,"name":"WD_REPEATS_REGION"},{"dbname":"PROSITE_PROFILES","description":"Trp-Asp (WD) repeats profile.","id":"PS50082","interpro_description":"WD40 repeat","interpro_id":"IPR001680","interpro_name":"WD40_rpt","locations":[{"end":52,"start":12},{"end":130,"start":100},{"end":170,"start":139},{"end":249,"start":217}],"match_end":249,"match_start":12,"name":"WD_REPEATS_2"},{"dbname":"PROSITE_PROFILES","description":"PFU domain profile.","id":"PS51394","interpro_description":"PLAA family ubiquitin binding domain","interpro_id":"IPR015155","interpro_name":"PFU","locations":[{"end":449,"start":354}],"match_end":449,"match_start":354,"name":"PFU"},{"dbname":"PROSITE_PROFILES","description":"PUL domain profile.","id":"PS51396","interpro_description":"PUL domain","interpro_id":"IPR013535","interpro_name":"PUL_dom","locations":[{"end":721,"start":464}],"match_end":721,"match_start":464,"name":"PUL"},{"dbname":"SMART","id":"SM00320","interpro_description":"WD40 repeat","interpro_id":"IPR001680","interpro_name":"WD40_rpt","locations":[{"end":43,"start":5},{"end":90,"start":47},{"end":208,"start":93},{"end":288,"start":210}],"match_end":288,"match_start":5,"name":"WD40_4"},{"dbname":"PRINTS","description":"G protein beta WD-40 repeat signature","id":"PR00320","interpro_description":"G-protein beta WD-40 repeat","interpro_id":"IPR020472","interpro_name":"G-protein_beta_WD-40_rep","locations":[{"end":44,"start":30},{"end":171,"start":157},{"end":209,"start":195}],"match_end":209,"match_start":30,"name":"GPROTEINBRPT"},{"dbname":"SUPERFAMILY","id":"SSF50978","interpro_description":"WD40-repeat-containing domain superfamily","interpro_id":"IPR036322","interpro_name":"WD40_repeat_dom_sf","locations":[{"end":298,"start":5}],"match_end":298,"match_start":5,"name":"WD40 repeat-like"},{"dbname":"SUPERFAMILY","id":"SSF48371","interpro_description":"Armadillo-type fold","interpro_id":"IPR016024","interpro_name":"ARM-type_fold","locations":[{"end":705,"start":522}],"match_end":705,"match_start":522,"name":"ARM repeat"},{"dbname":"GENE3D","id":"G3DSA:3.10.20.870","interpro_description":"PFU domain superfamily","interpro_id":"IPR038122","interpro_name":"PFU_sf","locations":[{"end":463,"start":376}],"match_end":463,"match_start":376},{"dbname":"GENE3D","id":"G3DSA:1.25.10.10","interpro_description":"Armadillo-like helical","interpro_id":"IPR011989","interpro_name":"ARM-like","locations":[{"end":719,"start":464}],"match_end":719,"match_start":464},{"dbname":"GENE3D","id":"G3DSA:2.130.10.10","interpro_description":"WD40/YVTN repeat-like-containing domain superfamily","interpro_id":"IPR015943","interpro_name":"WD40/YVTN_repeat-like_dom_sf","locations":[{"end":307,"start":2}],"match_end":307,"match_start":2},{"dbname":"PANTHER","id":"PTHR19849","locations":[{"end":630,"start":5}],"match_end":630,"match_start":5,"name":"PHOSPHOLIPASE A-2-ACTIVATING PROTEIN"}],"location":{"chromosome_name":"supercont5.1","end_pos":3609640,"start_pos":3607246,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":459,"start":451}},{"range":{"end":534,"start":525}}],"name":"lub1","ortholog_annotations":[{"gene_uniquename":"SJAG_00312","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9043","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00312","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC887.04c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00312","ortholog_taxonid":4932,"ortholog_uniquename":"YKL213C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00312","ortholog_taxonid":4932,"ortholog_uniquename":"YKL213C","reference_uniquename":"PMID:26896847"}],"product":"WD repeat protein Lub1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0043130"]}},"subset_termids":["GO:0030163","MONDO:0700092","MONDO:0002320","GO:0005634","GO:0006281"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005737":null,"GO:0006281":null,"GO:0010992":null,"GO:0043130":null,"GO:0043161":null,"MONDO:0060502":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00312.1"],"transcripts_by_uniquename":{"SJAG_00312.1":null},"uniprot_identifier":"B6JVA5","uniquename":"SJAG_00312"}


id: SJAG_00313
data:
  {"cv_annotations":{"biological_process":[{"annotations":[82065],"is_not":false,"summary":null,"term":"GO:0045292"},{"annotations":[114307],"is_not":false,"summary":null,"term":"GO:1903241"}],"cellular_component":[{"annotations":[82064],"is_not":false,"summary":null,"term":"GO:0071011"},{"annotations":[82063],"is_not":false,"summary":null,"term":"GO:0005686"}],"molecular_function":[{"annotations":[71381],"is_not":false,"summary":null,"term":"GO:0003723"}]},"dbxrefs":["InterPro:IPR035979","InterPro:IPR000504","InterPro:IPR012677","EnsemblGenomes-Gn:SJAG_00313","UniProtKB/TrEMBL:B6JVA6","GOA:B6JVA6","EnsemblGenomes-Tr:EEB05307"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":234,"start":114}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mcs4","uniquename":"SJAG_00318"},{"name":"sog2","uniquename":"SJAG_00317"},{"uniquename":"SJAG_00316"},{"name":"mrpl38","uniquename":"SJAG_00315"},{"name":"snx3","uniquename":"SJAG_00314"},{"name":"cwf29","uniquename":"SJAG_00313"},{"name":"lub1","uniquename":"SJAG_00312"},{"name":"noc3","uniquename":"SJAG_00311"},{"uniquename":"SJAG_00310"},{"name":"adi1","uniquename":"SJAG_00309"},{"name":"pth3","uniquename":"SJAG_00308"}],"genes_by_uniquename":{"HGNC:24282":null,"SJAG_00313":null,"SPBC887.05c":null,"YIR005W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"RNA recognition motif","id":"PF00076","interpro_description":"RNA recognition motif domain","interpro_id":"IPR000504","interpro_name":"RRM_dom","locations":[{"end":102,"start":33}],"match_end":102,"match_start":33,"name":"RRM_1"},{"dbname":"CDD","description":"RRM_ist3_like","id":"cd12411","interpro_description":"Ist3-like, RNA recognition motif","interpro_id":"IPR045844","interpro_name":"RRM_Ist3-like","locations":[{"end":110,"start":22}],"match_end":110,"match_start":22,"name":"RRM_ist3_like"},{"dbname":"PROSITE_PROFILES","description":"Eukaryotic RNA Recognition Motif (RRM) profile.","id":"PS50102","interpro_description":"RNA recognition motif domain","interpro_id":"IPR000504","interpro_name":"RRM_dom","locations":[{"end":109,"start":31}],"match_end":109,"match_start":31,"name":"RRM"},{"dbname":"SMART","id":"SM00360","interpro_description":"RNA recognition motif domain","interpro_id":"IPR000504","interpro_name":"RRM_dom","locations":[{"end":105,"start":32}],"match_end":105,"match_start":32,"name":"rrm1_1"},{"dbname":"SUPERFAMILY","id":"SSF54928","interpro_description":"RNA-binding domain superfamily","interpro_id":"IPR035979","interpro_name":"RBD_domain_sf","locations":[{"end":110,"start":23}],"match_end":110,"match_start":23,"name":"RNA-binding domain, RBD"},{"dbname":"GENE3D","id":"G3DSA:3.30.70.330","interpro_description":"Nucleotide-binding alpha-beta plait domain superfamily","interpro_id":"IPR012677","interpro_name":"Nucleotide-bd_a/b_plait_sf","locations":[{"end":121,"start":21}],"match_end":121,"match_start":21},{"dbname":"PANTHER","id":"PTHR45880","interpro_description":"RNA Processing and Spliceosome Component","interpro_id":"IPR051847","interpro_name":"RNA_proc/Spliceosome_comp","locations":[{"end":192,"start":1}],"match_end":192,"match_start":1,"name":"RNA-BINDING MOTIF PROTEIN, X-LINKED 2"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":234,"start":114}],"match_end":234,"match_start":114,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":143,"start":134}],"match_end":143,"match_start":134,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":155,"start":144},{"end":186,"start":161},{"end":223,"start":205}],"match_end":223,"match_start":144,"name":"disorder_prediction"},{"dbname":"MOBIDB-Positive-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Positive-Polyelectrolyte","locations":[{"end":204,"start":187}],"match_end":204,"match_start":187,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3606826,"start_pos":3605959,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":206,"start":180}}],"name":"cwf29","ortholog_annotations":[{"gene_uniquename":"SJAG_00313","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:24282","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00313","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC887.05c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00313","ortholog_taxonid":4932,"ortholog_uniquename":"YIR005W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00313","ortholog_taxonid":4932,"ortholog_uniquename":"YIR005W","reference_uniquename":"PMID:26896847"}],"product":"U2 snRNP-associated RNA-binding protein Cwf29","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003723"]}},"subset_termids":["GO:0005634","GO:0016071","GO:0065003"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003723":null,"GO:0005686":null,"GO:0045292":null,"GO:0071011":null,"GO:1903241":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00313.1"],"transcripts_by_uniquename":{"SJAG_00313.1":null},"uniprot_identifier":"B6JVA6","uniquename":"SJAG_00313"}


id: SJAG_00314
data:
  {"cv_annotations":{"biological_process":[{"annotations":[82057],"is_not":false,"summary":null,"term":"GO:0032456"},{"annotations":[114314],"is_not":false,"summary":null,"term":"GO:0006886"},{"annotations":[82054],"is_not":false,"summary":null,"term":"GO:0034499"}],"cellular_component":[{"annotations":[114309],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[82053],"is_not":false,"summary":null,"term":"GO:0031901"},{"annotations":[114311],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[82056],"is_not":false,"summary":null,"term":"GO:0030904"}],"molecular_function":[{"annotations":[82055],"is_not":false,"summary":null,"term":"GO:0032266"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_00314","UniProtKB/TrEMBL:B6JVA7","GOA:B6JVA7","EnsemblGenomes-Tr:EEB05308","InterPro:IPR001683","InterPro:IPR036871"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pus2","uniquename":"SJAG_00319"},{"name":"mcs4","uniquename":"SJAG_00318"},{"name":"sog2","uniquename":"SJAG_00317"},{"uniquename":"SJAG_00316"},{"name":"mrpl38","uniquename":"SJAG_00315"},{"name":"snx3","uniquename":"SJAG_00314"},{"name":"cwf29","uniquename":"SJAG_00313"},{"name":"lub1","uniquename":"SJAG_00312"},{"name":"noc3","uniquename":"SJAG_00311"},{"uniquename":"SJAG_00310"},{"name":"adi1","uniquename":"SJAG_00309"}],"genes_by_uniquename":{"HGNC:11174":null,"HGNC:14976":null,"SJAG_00314":null,"SPBC887.06c":null,"YOR357C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"PX domain","id":"PF00787","interpro_description":"Phox homology","interpro_id":"IPR001683","interpro_name":"PX_dom","locations":[{"end":136,"start":55}],"match_end":136,"match_start":55,"name":"PX"},{"dbname":"PROSITE_PROFILES","description":"PX domain profile.","id":"PS50195","interpro_description":"Phox homology","interpro_id":"IPR001683","interpro_name":"PX_dom","locations":[{"end":140,"start":23}],"match_end":140,"match_start":23,"name":"PX"},{"dbname":"SMART","id":"SM00312","interpro_description":"Phox homology","interpro_id":"IPR001683","interpro_name":"PX_dom","locations":[{"end":137,"start":22}],"match_end":137,"match_start":22,"name":"PX_2"},{"dbname":"SUPERFAMILY","id":"SSF64268","interpro_description":"PX domain superfamily","interpro_id":"IPR036871","interpro_name":"PX_dom_sf","locations":[{"end":137,"start":22}],"match_end":137,"match_start":22,"name":"PX domain"},{"dbname":"GENE3D","id":"G3DSA:3.30.1520.10","interpro_description":"PX domain superfamily","interpro_id":"IPR036871","interpro_name":"PX_dom_sf","locations":[{"end":145,"start":19}],"match_end":145,"match_start":19},{"dbname":"PANTHER","id":"PTHR45963","interpro_description":"Sorting Nexin","interpro_id":"IPR051074","interpro_name":"Sorting_Nexin","locations":[{"end":145,"start":10}],"match_end":145,"match_start":10,"name":"RE52028P"}],"location":{"chromosome_name":"supercont5.1","end_pos":3605824,"start_pos":3605134,"strand":"forward"},"name":"snx3","ortholog_annotations":[{"gene_uniquename":"SJAG_00314","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11174","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00314","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:14976","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00314","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC887.06c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00314","ortholog_taxonid":4932,"ortholog_uniquename":"YOR357C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00314","ortholog_taxonid":4932,"ortholog_uniquename":"YOR357C","reference_uniquename":"PMID:26896847"}],"product":"sorting nexin Snx3","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0032266"]}},"subset_termids":["GO:0005768","GO:0005829","GO:0008289","GO:0031410","GO:0016192","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null,"GO:0006886":null,"GO:0030904":null,"GO:0031901":null,"GO:0032266":null,"GO:0032456":null,"GO:0034499":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00314.1"],"transcripts_by_uniquename":{"SJAG_00314.1":null},"uniprot_identifier":"B6JVA7","uniquename":"SJAG_00314"}


id: SJAG_00315
data:
  {"cv_annotations":{"biological_process":[{"annotations":[114319],"is_not":false,"summary":null,"term":"GO:0032543"}],"cellular_component":[{"annotations":[76560],"is_not":false,"summary":null,"term":"GO:0005762"}],"molecular_function":[{"annotations":[76559],"is_not":false,"summary":null,"term":"GO:0070180"},{"annotations":[76561],"is_not":false,"summary":null,"term":"GO:0003735"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_00315","UniProtKB/TrEMBL:B6JVA8","GOA:B6JVA8","InterPro:IPR005745","InterPro:IPR019972","EnsemblGenomes-Tr:EEB05309","InterPro:IPR000218","InterPro:IPR036853"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"shf1","uniquename":"SJAG_00320"},{"name":"pus2","uniquename":"SJAG_00319"},{"name":"mcs4","uniquename":"SJAG_00318"},{"name":"sog2","uniquename":"SJAG_00317"},{"uniquename":"SJAG_00316"},{"name":"mrpl38","uniquename":"SJAG_00315"},{"name":"snx3","uniquename":"SJAG_00314"},{"name":"cwf29","uniquename":"SJAG_00313"},{"name":"lub1","uniquename":"SJAG_00312"},{"name":"noc3","uniquename":"SJAG_00311"},{"uniquename":"SJAG_00310"}],"genes_by_uniquename":{"HGNC:14279":null,"SJAG_00315":null,"SPBC887.07":null,"YKL170W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Ribosomal protein L14p/L23e","id":"PF00238","interpro_description":"Large ribosomal subunit protein uL14","interpro_id":"IPR000218","interpro_name":"Ribosomal_uL14","locations":[{"end":125,"start":1}],"match_end":125,"match_start":1,"name":"Ribosomal_L14"},{"dbname":"CDD","description":"Ribosomal_uL14","id":"cd00337","locations":[{"end":120,"start":4}],"match_end":120,"match_start":4,"name":"Ribosomal_uL14"},{"dbname":"PROSITE_PATTERNS","description":"Ribosomal protein L14 signature.","id":"PS00049","interpro_description":"Large ribosomal subunit protein uL14, conserved site","interpro_id":"IPR019972","interpro_name":"Ribosomal_uL14_CS","locations":[{"end":90,"start":64}],"match_end":90,"match_start":64,"name":"RIBOSOMAL_L14"},{"dbname":"SMART","id":"SM01374","interpro_description":"Large ribosomal subunit protein uL14","interpro_id":"IPR000218","interpro_name":"Ribosomal_uL14","locations":[{"end":126,"start":1}],"match_end":126,"match_start":1,"name":"Ribosomal_L14_2"},{"dbname":"FUNFAM","description":"50S ribosomal protein L14","id":"G3DSA:2.40.150.20:FF:000005","locations":[{"end":126,"start":1}],"match_end":126,"match_start":1},{"dbname":"SUPERFAMILY","id":"SSF50193","interpro_description":"Large ribosomal subunit protein uL14 superfamily","interpro_id":"IPR036853","interpro_name":"Ribosomal_uL14_sf","locations":[{"end":126,"start":1}],"match_end":126,"match_start":1,"name":"Ribosomal protein L14"},{"dbname":"GENE3D","id":"G3DSA:2.40.150.20","interpro_description":"Large ribosomal subunit protein uL14 superfamily","interpro_id":"IPR036853","interpro_name":"Ribosomal_uL14_sf","locations":[{"end":126,"start":1}],"match_end":126,"match_start":1,"name":"Ribosomal protein L14"},{"dbname":"PANTHER","id":"PTHR11761","interpro_description":"Large ribosomal subunit protein uL14","interpro_id":"IPR000218","interpro_name":"Ribosomal_uL14","locations":[{"end":126,"start":1}],"match_end":126,"match_start":1,"name":"50S/60S RIBOSOMAL PROTEIN L14/L23"},{"dbname":"HAMAP","description":"Large ribosomal subunit protein uL14 [rplN].","id":"MF_01367","interpro_description":"Large ribosomal subunit protein uL14","interpro_id":"IPR000218","interpro_name":"Ribosomal_uL14","locations":[{"end":126,"start":1}],"match_end":126,"match_start":1,"name":"Ribosomal_L14"},{"dbname":"NCBIFAM","description":"50S ribosomal protein L14","id":"TIGR01067","interpro_description":"Large ribosomal subunit protein uL14, bacterial-type","interpro_id":"IPR005745","interpro_name":"Ribosomal_uL14_bac-type","locations":[{"end":126,"start":1}],"match_end":126,"match_start":1,"name":"rplN_bact"}],"location":{"chromosome_name":"supercont5.1","end_pos":3604536,"start_pos":3604035,"strand":"reverse"},"name":"mrpl38","ortholog_annotations":[{"gene_uniquename":"SJAG_00315","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:14279","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00315","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC887.07","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00315","ortholog_taxonid":4932,"ortholog_uniquename":"YKL170W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00315","ortholog_taxonid":4932,"ortholog_uniquename":"YKL170W","reference_uniquename":"PMID:26896847"}],"product":"mitochondrial ribosomal protein subunit L14","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0070180"],"not-binding":["GO:0003735"]}},"subset_termids":["GO:0005739","GO:0005198","GO:0140053"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003735":null,"GO:0005762":null,"GO:0032543":null,"GO:0070180":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00315.1"],"transcripts_by_uniquename":{"SJAG_00315.1":null},"uniprot_identifier":"B6JVA8","uniquename":"SJAG_00315"}


id: SJAG_00316
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[114322],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[114323],"is_not":false,"summary":null,"term":"GO:0005634"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB05310","EnsemblGenomes-Gn:SJAG_00316","UniProtKB/TrEMBL:B6JVA9"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"plc1","uniquename":"SJAG_00321"},{"name":"shf1","uniquename":"SJAG_00320"},{"name":"pus2","uniquename":"SJAG_00319"},{"name":"mcs4","uniquename":"SJAG_00318"},{"name":"sog2","uniquename":"SJAG_00317"},{"uniquename":"SJAG_00316"},{"name":"mrpl38","uniquename":"SJAG_00315"},{"name":"snx3","uniquename":"SJAG_00314"},{"name":"cwf29","uniquename":"SJAG_00313"},{"name":"lub1","uniquename":"SJAG_00312"},{"name":"noc3","uniquename":"SJAG_00311"}],"genes_by_uniquename":{"SJAG_00316":null,"SPBC887.08":null},"has_protein_features":false,"location":{"chromosome_name":"supercont5.1","end_pos":3603753,"start_pos":3603267,"strand":"reverse"},"ortholog_annotations":[{"gene_uniquename":"SJAG_00316","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC887.08","reference_uniquename":"PMID:21511999"}],"product":"Schizosaccharomyces specific protein","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null},"split_by_parent_groups":{},"subset_termids":["GO:0005634","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00316.1"],"transcripts_by_uniquename":{"SJAG_00316.1":null},"uniprot_identifier":"B6JVA9","uniquename":"SJAG_00316"}


id: SJAG_00317
data:
  {"cv_annotations":{"biological_process":[{"annotations":[114330],"is_not":false,"summary":null,"term":"GO:0061173"},{"annotations":[114331],"is_not":false,"summary":null,"term":"GO:0062200"}],"cellular_component":[{"annotations":[114324],"is_not":false,"summary":null,"term":"GO:0032153"},{"annotations":[114325],"is_not":false,"summary":null,"term":"GO:0051286"},{"annotations":[114327],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[114328],"is_not":false,"summary":null,"term":"GO:0044732"},{"annotations":[114329],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[114332],"is_not":false,"summary":null,"term":"GO:0035591"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_00317","InterPro:IPR003591","InterPro:IPR001611","UniProtKB/TrEMBL:B6JVB0","GOA:B6JVB0","InterPro:IPR019487","InterPro:IPR032675","EnsemblGenomes-Tr:EEB05311"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":258,"start":213}},{"range":{"end":304,"start":271}},{"range":{"end":450,"start":316}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"sap145","uniquename":"SJAG_00322"},{"name":"plc1","uniquename":"SJAG_00321"},{"name":"shf1","uniquename":"SJAG_00320"},{"name":"pus2","uniquename":"SJAG_00319"},{"name":"mcs4","uniquename":"SJAG_00318"},{"name":"sog2","uniquename":"SJAG_00317"},{"uniquename":"SJAG_00316"},{"name":"mrpl38","uniquename":"SJAG_00315"},{"name":"snx3","uniquename":"SJAG_00314"},{"name":"cwf29","uniquename":"SJAG_00313"},{"name":"lub1","uniquename":"SJAG_00312"}],"genes_by_uniquename":{"HGNC:26719":null,"SJAG_00317":null,"SPBC887.09c":null,"YOR353C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"RAM signalling pathway protein","id":"PF10428","interpro_description":"RAM signalling pathway, SOG2","interpro_id":"IPR019487","interpro_name":"RAM_signalling_pathway_SOG2","locations":[{"end":632,"start":482},{"end":806,"start":663}],"match_end":806,"match_start":482,"name":"SOG2"},{"dbname":"PFAM","description":"Leucine-rich repeat region","id":"PF23598","interpro_description":"Disease resistance R13L4/SHOC-2-like, LRR domain","interpro_id":"IPR055414","interpro_name":"LRR_R13L4/SHOC2-like","locations":[{"end":148,"start":61}],"match_end":148,"match_start":61,"name":"LRR_14"},{"dbname":"SMART","id":"SM00369","interpro_description":"Leucine-rich repeat, typical subtype","interpro_id":"IPR003591","interpro_name":"Leu-rich_rpt_typical-subtyp","locations":[{"end":140,"start":71}],"match_end":140,"match_start":71,"name":"LRR_typ_2"},{"dbname":"SMART","id":"SM00364","locations":[{"end":90,"start":73},{"end":113,"start":94},{"end":136,"start":117}],"match_end":136,"match_start":73,"name":"LRR_bac_2"},{"dbname":"SUPERFAMILY","id":"SSF52058","locations":[{"end":158,"start":23}],"match_end":158,"match_start":23,"name":"L domain-like"},{"dbname":"GENE3D","id":"G3DSA:3.80.10.10","interpro_description":"Leucine-rich repeat domain superfamily","interpro_id":"IPR032675","interpro_name":"LRR_dom_sf","locations":[{"end":172,"start":17}],"match_end":172,"match_start":17,"name":"Ribonuclease Inhibitor"},{"dbname":"PANTHER","id":"PTHR47186","locations":[{"end":149,"start":31}],"match_end":149,"match_start":31,"name":"LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":258,"start":213},{"end":304,"start":271},{"end":450,"start":316}],"match_end":450,"match_start":213,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":258,"start":230},{"end":292,"start":271},{"end":349,"start":330},{"end":391,"start":380}],"match_end":391,"match_start":230,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":329,"start":316},{"end":402,"start":392}],"match_end":402,"match_start":316,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3602917,"start_pos":3600248,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":291,"start":229}},{"range":{"end":349,"start":329}},{"range":{"end":390,"start":369}},{"range":{"end":431,"start":416}},{"range":{"end":494,"start":482}},{"range":{"end":634,"start":623}},{"range":{"end":717,"start":705}},{"range":{"end":777,"start":761}}],"name":"sog2","ortholog_annotations":[{"gene_uniquename":"SJAG_00317","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:26719","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00317","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC887.09c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00317","ortholog_taxonid":4932,"ortholog_uniquename":"YOR353C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00317","ortholog_taxonid":4932,"ortholog_uniquename":"YOR353C","reference_uniquename":"PMID:26896847"}],"product":"MOR signalling network scaffold, leucine-rich repeat protein Sog2","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0035591"]}},"subset_termids":["GO:0005634","GO:0023052","GO:0007163","GO:0060090","GO:0015630","GO:0005816","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null,"GO:0032153":null,"GO:0035591":null,"GO:0044732":null,"GO:0051286":null,"GO:0061173":null,"GO:0062200":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00317.1"],"transcripts_by_uniquename":{"SJAG_00317.1":null},"uniprot_identifier":"B6JVB0","uniquename":"SJAG_00317"}


id: SJAG_00318
data:
  {"cv_annotations":{"PSI-MOD":[{"annotations":[82426],"is_not":false,"summary":null,"term":"MOD:00042"}],"biological_process":[{"annotations":[114336],"is_not":false,"summary":null,"term":"GO:0010972"},{"annotations":[61395],"is_not":false,"summary":null,"term":"GO:0000160"},{"annotations":[114338],"is_not":false,"summary":null,"term":"GO:1900745"}],"cellular_component":[{"annotations":[114333],"is_not":false,"summary":null,"term":"GO:0032153"},{"annotations":[114334],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[114335],"is_not":false,"summary":null,"term":"GO:1990315"}],"molecular_function":[{"annotations":[61397],"is_not":false,"summary":null,"term":"GO:0000156"},{"annotations":[114340],"is_not":false,"summary":null,"term":"GO:0030295"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_00318","InterPro:IPR011006","UniProtKB/TrEMBL:B6JVB1","EnsemblGenomes-Tr:EEB05312","InterPro:IPR001789","GOA:B6JVB1"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":261,"start":203}},{"range":{"end":328,"start":297}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rrp16","uniquename":"SJAG_00323"},{"name":"sap145","uniquename":"SJAG_00322"},{"name":"plc1","uniquename":"SJAG_00321"},{"name":"shf1","uniquename":"SJAG_00320"},{"name":"pus2","uniquename":"SJAG_00319"},{"name":"mcs4","uniquename":"SJAG_00318"},{"name":"sog2","uniquename":"SJAG_00317"},{"uniquename":"SJAG_00316"},{"name":"mrpl38","uniquename":"SJAG_00315"},{"name":"snx3","uniquename":"SJAG_00314"},{"name":"cwf29","uniquename":"SJAG_00313"}],"genes_by_uniquename":{"SJAG_00318":null,"SPBC887.10":null,"YLR006C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Response regulator receiver domain","id":"PF00072","interpro_description":"Signal transduction response regulator, receiver domain","interpro_id":"IPR001789","interpro_name":"Sig_transdc_resp-reg_receiver","locations":[{"end":499,"start":426}],"match_end":499,"match_start":426,"name":"Response_reg"},{"dbname":"CDD","description":"REC_hyHK_CKI1_RcsC-like","id":"cd17546","locations":[{"end":563,"start":426}],"match_end":563,"match_start":426,"name":"REC_hyHK_CKI1_RcsC-like"},{"dbname":"PROSITE_PROFILES","description":"Response regulatory domain profile.","id":"PS50110","interpro_description":"Signal transduction response regulator, receiver domain","interpro_id":"IPR001789","interpro_name":"Sig_transdc_resp-reg_receiver","locations":[{"end":567,"start":425}],"match_end":567,"match_start":425,"name":"RESPONSE_REGULATORY"},{"dbname":"SMART","id":"SM00448","interpro_description":"Signal transduction response regulator, receiver domain","interpro_id":"IPR001789","interpro_name":"Sig_transdc_resp-reg_receiver","locations":[{"end":563,"start":424}],"match_end":563,"match_start":424,"name":"REC_2"},{"dbname":"FUNFAM","description":"Putative two-component response regulator SSK1p","id":"G3DSA:3.40.50.2300:FF:000146","locations":[{"end":566,"start":422}],"match_end":566,"match_start":422},{"dbname":"SUPERFAMILY","id":"SSF52172","interpro_description":"CheY-like superfamily","interpro_id":"IPR011006","interpro_name":"CheY-like_superfamily","locations":[{"end":494,"start":422},{"end":568,"start":522}],"match_end":568,"match_start":422,"name":"CheY-like"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.2300","locations":[{"end":566,"start":422}],"match_end":566,"match_start":422},{"dbname":"PANTHER","id":"PTHR45339","locations":[{"end":566,"start":305}],"match_end":566,"match_start":305,"name":"HYBRID SIGNAL TRANSDUCTION HISTIDINE KINASE J"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":261,"start":203},{"end":328,"start":297}],"match_end":328,"match_start":203,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":212,"start":203}],"match_end":212,"match_start":203,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":324,"start":307}],"match_end":324,"match_start":307,"name":"disorder_prediction"},{"dbname":"MOBIDB-Positive-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Positive-Polyelectrolyte","locations":[{"end":248,"start":235}],"match_end":248,"match_start":235,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3599540,"start_pos":3597735,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":104,"start":90}},{"range":{"end":120,"start":111}},{"range":{"end":216,"start":196}},{"range":{"end":249,"start":235}},{"range":{"end":274,"start":257}},{"range":{"end":411,"start":402}}],"name":"mcs4","ortholog_annotations":[{"gene_uniquename":"SJAG_00318","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC887.10","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00318","ortholog_taxonid":4932,"ortholog_uniquename":"YLR006C","reference_uniquename":"PMID:29761456"}],"product":"response regulator Mcs4","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"GO_REF:0000117":null,"PMID:21511999":null,"PMID:29761456":null,"PMID:36408920":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0030295","GO:0000156"]}},"subset_termids":["GO:0098772","GO:0044772","GO:0030234","GO:0023052"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000156":null,"GO:0000160":null,"GO:0005737":null,"GO:0010972":null,"GO:0030295":null,"GO:0032153":null,"GO:1900745":null,"GO:1990315":null,"MOD:00042":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00318.1"],"transcripts_by_uniquename":{"SJAG_00318.1":null},"uniprot_identifier":"B6JVB1","uniquename":"SJAG_00318"}


id: SJAG_00319
data:
  {"active_sites":[{"assigned_by":"UniProtKB","range":{"end":97,"start":97}}],"binding_sites":[{"assigned_by":"UniProtKB","ligand":"substrate","range":{"end":156,"start":156}}],"cv_annotations":{"biological_process":[{"annotations":[74692],"is_not":false,"summary":null,"term":"GO:1990481"},{"annotations":[61185],"is_not":false,"summary":null,"term":"GO:0031120"},{"annotations":[74693],"is_not":false,"summary":null,"term":"GO:0031119"}],"cellular_component":[{"annotations":[114341],"is_not":false,"summary":null,"term":"GO:0005739"},{"annotations":[74690],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[114345],"is_not":false,"summary":null,"term":"GO:0160153"},{"annotations":[61182],"is_not":false,"summary":null,"term":"GO:0003723"}],"mondo":[{"annotations":[88694],"is_not":false,"summary":null,"term":"MONDO:0024553"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JVB2","InterPro:IPR020103","EnsemblGenomes-Gn:SJAG_00319","InterPro:IPR041708","EnsemblGenomes-Tr:EEB05313","InterPro:IPR020097","InterPro:IPR020095","GOA:B6JVB2","InterPro:IPR001406"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_00324"},{"name":"rrp16","uniquename":"SJAG_00323"},{"name":"sap145","uniquename":"SJAG_00322"},{"name":"plc1","uniquename":"SJAG_00321"},{"name":"shf1","uniquename":"SJAG_00320"},{"name":"pus2","uniquename":"SJAG_00319"},{"name":"mcs4","uniquename":"SJAG_00318"},{"name":"sog2","uniquename":"SJAG_00317"},{"uniquename":"SJAG_00316"},{"name":"mrpl38","uniquename":"SJAG_00315"},{"name":"snx3","uniquename":"SJAG_00314"}],"genes_by_uniquename":{"HGNC:15508":null,"SJAG_00319":null,"SPBC887.11":null,"YGL063W":null,"YPL212C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"tRNA pseudouridine synthase","id":"PF01416","interpro_description":"Pseudouridine synthase I, TruA, alpha/beta domain","interpro_id":"IPR020097","interpro_name":"PsdUridine_synth_TruA_a/b_dom","locations":[{"end":363,"start":280}],"match_end":363,"match_start":280,"name":"PseudoU_synth_1"},{"dbname":"CDD","description":"PseudoU_synth_PUS1_PUS2","id":"cd02568","interpro_description":"Pseudouridine synthase PUS1/ PUS2-like","interpro_id":"IPR041708","interpro_name":"PUS1/PUS2-like","locations":[{"end":385,"start":45}],"match_end":385,"match_start":45,"name":"PseudoU_synth_PUS1_PUS2"},{"dbname":"FUNFAM","description":"tRNA pseudouridine synthase","id":"G3DSA:3.30.70.580:FF:000002","locations":[{"end":151,"start":33}],"match_end":151,"match_start":33},{"dbname":"FUNFAM","description":"tRNA pseudouridine synthase","id":"G3DSA:3.30.70.660:FF:000002","locations":[{"end":449,"start":245}],"match_end":449,"match_start":245},{"dbname":"SUPERFAMILY","id":"SSF55120","interpro_description":"Pseudouridine synthase, catalytic domain superfamily","interpro_id":"IPR020103","interpro_name":"PsdUridine_synth_cat_dom_sf","locations":[{"end":175,"start":40},{"end":390,"start":267}],"match_end":390,"match_start":40,"name":"Pseudouridine synthase"},{"dbname":"GENE3D","id":"G3DSA:3.30.70.580","interpro_description":"Pseudouridine synthase TruA/RsuA/RluB/E/F, N-terminal","interpro_id":"IPR020094","interpro_name":"TruA/RsuA/RluB/E/F_N","locations":[{"end":151,"start":34}],"match_end":151,"match_start":34},{"dbname":"GENE3D","id":"G3DSA:3.30.70.660","interpro_description":"Pseudouridine synthase I, TruA, C-terminal","interpro_id":"IPR020095","interpro_name":"PsdUridine_synth_TruA_C","locations":[{"end":165,"start":152},{"end":448,"start":259}],"match_end":448,"match_start":152},{"dbname":"PANTHER","id":"PTHR11142","interpro_description":"Pseudouridine synthase I, TruA","interpro_id":"IPR001406","interpro_name":"PsdUridine_synth_TruA","locations":[{"end":427,"start":31}],"match_end":427,"match_start":31,"name":"PSEUDOURIDYLATE SYNTHASE"},{"dbname":"NCBIFAM","description":"tRNA pseudouridine(38-40) synthase TruA","id":"TIGR00071","interpro_description":"Pseudouridine synthase I, TruA","interpro_id":"IPR001406","interpro_name":"PsdUridine_synth_TruA","locations":[{"end":370,"start":42}],"match_end":370,"match_start":42,"name":"hisT_truA"}],"location":{"chromosome_name":"supercont5.1","end_pos":3597312,"start_pos":3595907,"strand":"reverse"},"name":"pus2","ortholog_annotations":[{"gene_uniquename":"SJAG_00319","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:15508","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00319","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC887.11","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00319","ortholog_taxonid":4932,"ortholog_uniquename":"YGL063W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00319","ortholog_taxonid":4932,"ortholog_uniquename":"YGL063W","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_00319","ortholog_taxonid":4932,"ortholog_uniquename":"YPL212C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00319","ortholog_taxonid":4932,"ortholog_uniquename":"YPL212C","reference_uniquename":"PMID:26896847"}],"product":"mitochondrial tRNA pseudouridine(27/28) synthase Pus2","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003723"],"not-binding":["GO:0160153"]}},"subset_termids":["GO:0016073","GO:0140101","MONDO:0004069","MONDO:0002280","MONDO:0005570","GO:0016853","GO:0140098","GO:0016071","GO:0006399","MONDO:0005336","MONDO:0005066","GO:0005634","GO:0005739"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003723":null,"GO:0005634":null,"GO:0005739":null,"GO:0031119":null,"GO:0031120":null,"GO:0160153":null,"GO:1990481":null,"MONDO:0024553":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00319.1"],"transcripts_by_uniquename":{"SJAG_00319.1":null},"uniprot_identifier":"B6JVB2","uniquename":"SJAG_00319"}


id: SJAG_00320
data:
  {"cv_annotations":{"biological_process":[{"annotations":[95201],"is_not":false,"summary":null,"term":"GO:0007535"},{"annotations":[95202],"is_not":false,"summary":null,"term":"GO:0040029"},{"annotations":[95203],"is_not":false,"summary":null,"term":"GO:0140673"}],"cellular_component":[{"annotations":[95198],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[95199],"is_not":false,"summary":null,"term":"GO:0033503"},{"annotations":[95200],"is_not":false,"summary":null,"term":"GO:0005634"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB05314","EnsemblGenomes-Gn:SJAG_00320","UniProtKB/TrEMBL:B6JVB3"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":98,"start":1}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"trm401","uniquename":"SJAG_00325"},{"uniquename":"SJAG_00324"},{"name":"rrp16","uniquename":"SJAG_00323"},{"name":"sap145","uniquename":"SJAG_00322"},{"name":"plc1","uniquename":"SJAG_00321"},{"name":"shf1","uniquename":"SJAG_00320"},{"name":"pus2","uniquename":"SJAG_00319"},{"name":"mcs4","uniquename":"SJAG_00318"},{"name":"sog2","uniquename":"SJAG_00317"},{"uniquename":"SJAG_00316"},{"name":"mrpl38","uniquename":"SJAG_00315"}],"genes_by_uniquename":{"HGNC:19369":null,"SJAG_00320":null,"SPAC22F8.12c":null,"YPL055C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":98,"start":1}],"match_end":98,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":75,"start":9},{"end":96,"start":82}],"match_end":96,"match_start":9,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3595211,"start_pos":3594702,"strand":"reverse"},"name":"shf1","ortholog_annotations":[{"gene_uniquename":"SJAG_00320","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:19369","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00320","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC22F8.12c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00320","ortholog_taxonid":4932,"ortholog_uniquename":"YPL055C","reference_uniquename":"PMID:29761456"}],"product":"histone H2B-K119 ubiquitin ligase complex (HULC) subunit Shf1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0005634","GO:0006351","GO:0005829","GO:0005694","GO:0006325"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null,"GO:0007535":null,"GO:0033503":null,"GO:0040029":null,"GO:0140673":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00320.1"],"transcripts_by_uniquename":{"SJAG_00320.1":null},"uniprot_identifier":"B6JVB3","uniquename":"SJAG_00320"}


id: SJAG_00321
data:
  {"cv_annotations":{"biological_process":[{"annotations":[95193],"is_not":false,"summary":null,"term":"GO:0032958"},{"annotations":[60932],"is_not":false,"summary":null,"term":"GO:0006629"},{"annotations":[74487],"is_not":false,"summary":null,"term":"GO:0048015"}],"cellular_component":[{"annotations":[95191],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[95192],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[60928],"is_not":false,"summary":null,"term":"GO:0005509"},{"annotations":[74486],"is_not":false,"summary":null,"term":"GO:0004435"}],"mondo":[{"annotations":[88092],"is_not":false,"summary":null,"term":"MONDO:0013845"},{"annotations":[88148],"is_not":false,"summary":null,"term":"MONDO:0957544"},{"annotations":[89045],"is_not":false,"summary":null,"term":"MONDO:0013944"},{"annotations":[88840],"is_not":false,"summary":null,"term":"MONDO:0013389"},{"annotations":[88440],"is_not":false,"summary":null,"term":"MONDO:0013766"},{"annotations":[88802],"is_not":false,"summary":null,"term":"MONDO:0030886"},{"annotations":[88010],"is_not":false,"summary":null,"term":"MONDO:0957790"},{"annotations":[88253],"is_not":false,"summary":null,"term":"MONDO:0007900"},{"annotations":[87158],"is_not":false,"summary":null,"term":"MONDO:0030074"}]},"dbxrefs":["InterPro:IPR000909","InterPro:IPR002048","EnsemblGenomes-Gn:SJAG_00321","InterPro:IPR037755","GOA:B6JVB4","UniProtKB/TrEMBL:B6JVB4","InterPro:IPR011992","InterPro:IPR017946","InterPro:IPR000008","InterPro:IPR035892","InterPro:IPR001192","InterPro:IPR001711","InterPro:IPR011993","InterPro:IPR015359","EnsemblGenomes-Tr:EEB05315"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":632,"start":599}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pex7","uniquename":"SJAG_00326"},{"name":"trm401","uniquename":"SJAG_00325"},{"uniquename":"SJAG_00324"},{"name":"rrp16","uniquename":"SJAG_00323"},{"name":"sap145","uniquename":"SJAG_00322"},{"name":"plc1","uniquename":"SJAG_00321"},{"name":"shf1","uniquename":"SJAG_00320"},{"name":"pus2","uniquename":"SJAG_00319"},{"name":"mcs4","uniquename":"SJAG_00318"},{"name":"sog2","uniquename":"SJAG_00317"},{"uniquename":"SJAG_00316"}],"genes_by_uniquename":{"HGNC:15917":null,"HGNC:29037":null,"HGNC:29185":null,"HGNC:9055":null,"HGNC:9056":null,"HGNC:9059":null,"HGNC:9060":null,"HGNC:9061":null,"HGNC:9062":null,"HGNC:9063":null,"HGNC:9064":null,"HGNC:9065":null,"HGNC:9066":null,"SJAG_00321":null,"SPAC22F8.11":null,"YPL268W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"C2 domain","id":"PF00168","interpro_description":"C2 domain","interpro_id":"IPR000008","interpro_name":"C2_dom","locations":[{"end":882,"start":778}],"match_end":882,"match_start":778,"name":"C2"},{"dbname":"PFAM","description":"Phosphatidylinositol-specific phospholipase C, Y domain","id":"PF00387","interpro_description":"Phospholipase C, phosphatidylinositol-specific, Y domain","interpro_id":"IPR001711","interpro_name":"PLipase_C_Pinositol-sp_Y","locations":[{"end":752,"start":640}],"match_end":752,"match_start":640,"name":"PI-PLC-Y"},{"dbname":"PFAM","description":"Phosphatidylinositol-specific phospholipase C, X domain","id":"PF00388","interpro_description":"Phosphatidylinositol-specific phospholipase C, X domain","interpro_id":"IPR000909","interpro_name":"PLipase_C_PInositol-sp_X_dom","locations":[{"end":589,"start":448}],"match_end":589,"match_start":448,"name":"PI-PLC-X"},{"dbname":"PFAM","description":"Phosphoinositide-specific phospholipase C, efhand-like","id":"PF09279","interpro_description":"Phosphoinositide-specific phospholipase C, EF-hand-like domain","interpro_id":"IPR015359","interpro_name":"PLC_EF-hand-like","locations":[{"end":437,"start":363}],"match_end":437,"match_start":363,"name":"EF-hand_like"},{"dbname":"CDD","description":"PI-PLC1c_yeast","id":"cd08598","locations":[{"end":742,"start":445}],"match_end":742,"match_start":445,"name":"PI-PLC1c_yeast"},{"dbname":"CDD","description":"EFh_ScPlc1p_like","id":"cd16207","locations":[{"end":436,"start":313}],"match_end":436,"match_start":313,"name":"EFh_ScPlc1p_like"},{"dbname":"CDD","description":"PH_PLC_fungal","id":"cd13360","interpro_description":"Plc1, PH domain","interpro_id":"IPR037755","interpro_name":"Plc1_PH","locations":[{"end":279,"start":161}],"match_end":279,"match_start":161,"name":"PH_PLC_fungal"},{"dbname":"CDD","description":"C2_PLC_like","id":"cd00275","locations":[{"end":905,"start":776}],"match_end":905,"match_start":776,"name":"C2_PLC_like"},{"dbname":"PROSITE_PROFILES","description":"C2 domain profile.","id":"PS50004","interpro_description":"C2 domain","interpro_id":"IPR000008","interpro_name":"C2_dom","locations":[{"end":887,"start":760}],"match_end":887,"match_start":760,"name":"C2"},{"dbname":"PROSITE_PROFILES","description":"Phosphatidylinositol-specific phospholipase X-box domain profile.","id":"PS50007","locations":[{"end":589,"start":446}],"match_end":589,"match_start":446,"name":"PIPLC_X_DOMAIN"},{"dbname":"PROSITE_PROFILES","description":"Phosphatidylinositol-specific phospholipase Y-box domain profile.","id":"PS50008","interpro_description":"Phospholipase C, phosphatidylinositol-specific, Y domain","interpro_id":"IPR001711","interpro_name":"PLipase_C_Pinositol-sp_Y","locations":[{"end":756,"start":640}],"match_end":756,"match_start":640,"name":"PIPLC_Y_DOMAIN"},{"dbname":"PROSITE_PROFILES","description":"EF-hand calcium-binding domain profile.","id":"PS50222","interpro_description":"EF-hand domain","interpro_id":"IPR002048","interpro_name":"EF_hand_dom","locations":[{"end":370,"start":335}],"match_end":370,"match_start":335,"name":"EF_HAND_2"},{"dbname":"SMART","id":"SM00239","interpro_description":"C2 domain","interpro_id":"IPR000008","interpro_name":"C2_dom","locations":[{"end":885,"start":778}],"match_end":885,"match_start":778,"name":"C2_3c"},{"dbname":"SMART","id":"SM00149","interpro_description":"Phospholipase C, phosphatidylinositol-specific, Y domain","interpro_id":"IPR001711","interpro_name":"PLipase_C_Pinositol-sp_Y","locations":[{"end":756,"start":640}],"match_end":756,"match_start":640,"name":"plcy_3"},{"dbname":"SMART","id":"SM00148","interpro_description":"Phosphatidylinositol-specific phospholipase C, X domain","interpro_id":"IPR000909","interpro_name":"PLipase_C_PInositol-sp_X_dom","locations":[{"end":589,"start":446}],"match_end":589,"match_start":446,"name":"plcx_3"},{"dbname":"PRINTS","description":"Phospholipase C signature","id":"PR00390","interpro_description":"Phosphoinositide phospholipase C family","interpro_id":"IPR001192","interpro_name":"PI-PLC_fam","locations":[{"end":469,"start":451},{"end":497,"start":477},{"end":590,"start":573},{"end":732,"start":693},{"end":881,"start":871}],"match_end":881,"match_start":451,"name":"PHPHLIPASEC"},{"dbname":"FUNFAM","description":"Phosphoinositide phospholipase C","id":"G3DSA:3.20.20.190:FF:000039","locations":[{"end":765,"start":444}],"match_end":765,"match_start":444},{"dbname":"SUPERFAMILY","id":"SSF51695","interpro_description":"PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily","interpro_id":"IPR017946","interpro_name":"PLC-like_Pdiesterase_TIM-brl","locations":[{"end":754,"start":446}],"match_end":754,"match_start":446,"name":"PLC-like phosphodiesterases"},{"dbname":"SUPERFAMILY","id":"SSF50729","locations":[{"end":266,"start":155}],"match_end":266,"match_start":155,"name":"PH domain-like"},{"dbname":"SUPERFAMILY","id":"SSF47473","interpro_description":"EF-hand domain pair","interpro_id":"IPR011992","interpro_name":"EF-hand-dom_pair","locations":[{"end":442,"start":311}],"match_end":442,"match_start":311,"name":"EF-hand"},{"dbname":"SUPERFAMILY","id":"SSF49562","interpro_description":"C2 domain superfamily","interpro_id":"IPR035892","interpro_name":"C2_domain_sf","locations":[{"end":903,"start":778}],"match_end":903,"match_start":778,"name":"C2 domain (Calcium/lipid-binding domain, CaLB)"},{"dbname":"GENE3D","id":"G3DSA:2.30.29.30","interpro_description":"PH-like domain superfamily","interpro_id":"IPR011993","interpro_name":"PH-like_dom_sf","locations":[{"end":273,"start":156}],"match_end":273,"match_start":156},{"dbname":"GENE3D","id":"G3DSA:3.20.20.190","interpro_description":"PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily","interpro_id":"IPR017946","interpro_name":"PLC-like_Pdiesterase_TIM-brl","locations":[{"end":766,"start":444}],"match_end":766,"match_start":444,"name":"Phosphatidylinositol (PI) phosphodiesterase"},{"dbname":"GENE3D","id":"G3DSA:2.60.40.150","interpro_description":"C2 domain superfamily","interpro_id":"IPR035892","interpro_name":"C2_domain_sf","locations":[{"end":910,"start":773}],"match_end":910,"match_start":773,"name":"C2 domain"},{"dbname":"GENE3D","id":"G3DSA:1.10.238.10","locations":[{"end":443,"start":309}],"match_end":443,"match_start":309},{"dbname":"PANTHER","id":"PTHR10336","interpro_description":"Phosphoinositide phospholipase C family","interpro_id":"IPR001192","interpro_name":"PI-PLC_fam","locations":[{"end":904,"start":159}],"match_end":904,"match_start":159,"name":"PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":632,"start":599}],"match_end":632,"match_start":599,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":616,"start":604}],"match_end":616,"match_start":604,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3594574,"start_pos":3591728,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":43,"start":30}}],"name":"plc1","ortholog_annotations":[{"gene_uniquename":"SJAG_00321","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:15917","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00321","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:29037","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00321","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:29185","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00321","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9055","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00321","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9056","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00321","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9059","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00321","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9060","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00321","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9061","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00321","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9062","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00321","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9063","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00321","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9064","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00321","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9065","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00321","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9066","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00321","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC22F8.11","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00321","ortholog_taxonid":4932,"ortholog_uniquename":"YPL268W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00321","ortholog_taxonid":4932,"ortholog_uniquename":"YPL268W","reference_uniquename":"PMID:26896847"}],"product":"phosphoinositide phospholipase C Plc1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005509"],"not-binding":["GO:0004435"]}},"subset_termids":["GO:0006629","GO:0016788","MONDO:0005027","GO:0023052","GO:0005829","MONDO:0005046","GO:0005634","MONDO:0002320","MONDO:0700092"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004435":null,"GO:0005509":null,"GO:0005634":null,"GO:0005829":null,"GO:0006629":null,"GO:0032958":null,"GO:0048015":null,"MONDO:0007900":null,"MONDO:0013389":null,"MONDO:0013766":null,"MONDO:0013845":null,"MONDO:0013944":null,"MONDO:0030074":null,"MONDO:0030886":null,"MONDO:0957544":null,"MONDO:0957790":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00321.1"],"transcripts_by_uniquename":{"SJAG_00321.1":null},"uniprot_identifier":"B6JVB4","uniquename":"SJAG_00321"}


id: SJAG_00322
data:
  {"coiled_coil_coords":[{"range":{"end":54,"start":30}}],"cv_annotations":{"biological_process":[{"annotations":[72151],"is_not":false,"summary":null,"term":"GO:0045292"},{"annotations":[95188],"is_not":false,"summary":null,"term":"GO:0000245"}],"cellular_component":[{"annotations":[72150],"is_not":false,"summary":null,"term":"GO:0071013"},{"annotations":[95183],"is_not":false,"summary":null,"term":"GO:0071014"},{"annotations":[72149],"is_not":false,"summary":null,"term":"GO:0071011"},{"annotations":[72148],"is_not":false,"summary":null,"term":"GO:0005686"},{"annotations":[95186],"is_not":false,"summary":null,"term":"GO:0071004"}],"molecular_function":[{"annotations":[95189],"is_not":false,"summary":null,"term":"GO:0003723"}],"mondo":[{"annotations":[87508],"is_not":false,"summary":null,"term":"MONDO:0958175"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_00322","EnsemblGenomes-Tr:EEB05316","UniProtKB/TrEMBL:B6JVB5","GOA:B6JVB5","InterPro:IPR006568","InterPro:IPR007180"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":78,"start":1}},{"range":{"end":160,"start":121}},{"range":{"end":588,"start":391}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cdc45","uniquename":"SJAG_00327"},{"name":"pex7","uniquename":"SJAG_00326"},{"name":"trm401","uniquename":"SJAG_00325"},{"uniquename":"SJAG_00324"},{"name":"rrp16","uniquename":"SJAG_00323"},{"name":"sap145","uniquename":"SJAG_00322"},{"name":"plc1","uniquename":"SJAG_00321"},{"name":"shf1","uniquename":"SJAG_00320"},{"name":"pus2","uniquename":"SJAG_00319"},{"name":"mcs4","uniquename":"SJAG_00318"},{"name":"sog2","uniquename":"SJAG_00317"}],"genes_by_uniquename":{"HGNC:10769":null,"SJAG_00322":null,"SPAC22F8.10c":null,"YMR240C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Domain of unknown function (DUF382)","id":"PF04037","interpro_description":"Domain of unknown function DUF382","interpro_id":"IPR007180","interpro_name":"DUF382","locations":[{"end":301,"start":176}],"match_end":301,"match_start":176,"name":"DUF382"},{"dbname":"PFAM","description":"PSP","id":"PF04046","interpro_description":"PSP, proline-rich","interpro_id":"IPR006568","interpro_name":"PSP_pro-rich","locations":[{"end":354,"start":310}],"match_end":354,"match_start":310,"name":"PSP"},{"dbname":"SMART","id":"SM00581","interpro_description":"PSP, proline-rich","interpro_id":"IPR006568","interpro_name":"PSP_pro-rich","locations":[{"end":359,"start":306}],"match_end":359,"match_start":306,"name":"testneu"},{"dbname":"PANTHER","id":"PTHR12785","interpro_description":"Pre-mRNA Spliceosomal U2 snRNP Complex Component","interpro_id":"IPR052584","interpro_name":"U2_snRNP_Complex_Component","locations":[{"end":582,"start":23}],"match_end":582,"match_start":23,"name":"SPLICING FACTOR 3B"},{"dbname":"COILS","id":"Coil","locations":[{"end":54,"start":30}],"match_end":54,"match_start":30,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":78,"start":1},{"end":160,"start":121},{"end":588,"start":391}],"match_end":588,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Negative-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Negative-Polyelectrolyte","locations":[{"end":143,"start":130},{"end":431,"start":410}],"match_end":431,"match_start":130,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":523,"start":509},{"end":560,"start":551}],"match_end":560,"match_start":509,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":76,"start":62},{"end":409,"start":393},{"end":452,"start":432},{"end":503,"start":488},{"end":534,"start":525}],"match_end":534,"match_start":62,"name":"disorder_prediction"},{"dbname":"MOBIDB-Positive-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Positive-Polyelectrolyte","locations":[{"end":48,"start":25}],"match_end":48,"match_start":25,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3591206,"start_pos":3589440,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":52,"start":38}},{"range":{"end":144,"start":131}},{"range":{"end":164,"start":155}},{"range":{"end":440,"start":407}}],"name":"sap145","ortholog_annotations":[{"gene_uniquename":"SJAG_00322","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10769","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00322","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC22F8.10c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00322","ortholog_taxonid":4932,"ortholog_uniquename":"YMR240C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00322","ortholog_taxonid":4932,"ortholog_uniquename":"YMR240C","reference_uniquename":"PMID:26896847"}],"product":"U2 snRNP-associated protein Sap145","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003723"]}},"subset_termids":["MONDO:0005497","GO:0016071","GO:0005634","GO:0065003"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000245":null,"GO:0003723":null,"GO:0005686":null,"GO:0045292":null,"GO:0071004":null,"GO:0071011":null,"GO:0071013":null,"GO:0071014":null,"MONDO:0958175":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00322.1"],"transcripts_by_uniquename":{"SJAG_00322.1":null},"uniprot_identifier":"B6JVB5","uniquename":"SJAG_00322"}


id: SJAG_00323
data:
  {"coiled_coil_coords":[{"range":{"end":243,"start":212}},{"range":{"end":313,"start":277}}],"cv_annotations":{"biological_process":[{"annotations":[74149],"is_not":false,"summary":null,"term":"GO:0000027"},{"annotations":[74148],"is_not":false,"summary":null,"term":"GO:0006364"}],"cellular_component":[{"annotations":[74147],"is_not":false,"summary":null,"term":"GO:0005730"},{"annotations":[60538],"is_not":false,"summary":null,"term":"GO:0005654"}],"molecular_function":[{"annotations":[74146],"is_not":false,"summary":null,"term":"GO:0008097"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JVB6","GOA:B6JVB6","InterPro:IPR011687","EnsemblGenomes-Gn:SJAG_00323","EnsemblGenomes-Tr:EEB05317"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":299,"start":246}},{"range":{"end":432,"start":409}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cis4","uniquename":"SJAG_00328"},{"name":"cdc45","uniquename":"SJAG_00327"},{"name":"pex7","uniquename":"SJAG_00326"},{"name":"trm401","uniquename":"SJAG_00325"},{"uniquename":"SJAG_00324"},{"name":"rrp16","uniquename":"SJAG_00323"},{"name":"sap145","uniquename":"SJAG_00322"},{"name":"plc1","uniquename":"SJAG_00321"},{"name":"shf1","uniquename":"SJAG_00320"},{"name":"pus2","uniquename":"SJAG_00319"},{"name":"mcs4","uniquename":"SJAG_00318"}],"genes_by_uniquename":{"HGNC:4333":null,"SJAG_00323":null,"SPAC22F8.09":null,"YPL146C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Nop53 (60S ribosomal biogenesis)","id":"PF07767","interpro_description":"Ribosome biogenesis protein Nop53/GLTSCR2","interpro_id":"IPR011687","interpro_name":"Nop53/GLTSCR2","locations":[{"end":391,"start":16}],"match_end":391,"match_start":16,"name":"Nop53"},{"dbname":"PANTHER","id":"PTHR14211","interpro_description":"Ribosome biogenesis protein Nop53/GLTSCR2","interpro_id":"IPR011687","interpro_name":"Nop53/GLTSCR2","locations":[{"end":423,"start":10}],"match_end":423,"match_start":10,"name":"GLIOMA SUPPRESSOR CANDIDATE REGION GENE 2"},{"dbname":"PIRSF","id":"PIRSF017302","interpro_description":"Ribosome biogenesis protein Nop53/GLTSCR2","interpro_id":"IPR011687","interpro_name":"Nop53/GLTSCR2","locations":[{"end":430,"start":3}],"match_end":430,"match_start":3,"name":"Gltscr2"},{"dbname":"COILS","id":"Coil","locations":[{"end":243,"start":212},{"end":313,"start":277}],"match_end":313,"match_start":212,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":299,"start":246},{"end":432,"start":409}],"match_end":432,"match_start":246,"name":"disorder_prediction"},{"dbname":"MOBIDB-Negative-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Negative-Polyelectrolyte","locations":[{"end":261,"start":251}],"match_end":261,"match_start":251,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":277,"start":262},{"end":299,"start":290}],"match_end":299,"match_start":262,"name":"disorder_prediction"},{"dbname":"MOBIDB-Positive-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Positive-Polyelectrolyte","locations":[{"end":289,"start":278}],"match_end":289,"match_start":278,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3589308,"start_pos":3587957,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":79,"start":69}},{"range":{"end":268,"start":255}},{"range":{"end":308,"start":282}},{"range":{"end":352,"start":322}}],"name":"rrp16","ortholog_annotations":[{"gene_uniquename":"SJAG_00323","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4333","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00323","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC22F8.09","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00323","ortholog_taxonid":4932,"ortholog_uniquename":"YPL146C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00323","ortholog_taxonid":4932,"ortholog_uniquename":"YPL146C","reference_uniquename":"PMID:26896847"}],"product":"rRNA processing protein Rrp16","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0008097"]}},"subset_termids":["GO:0005654","GO:0005634","GO:0042254","GO:0005730","GO:0065003"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000027":null,"GO:0005654":null,"GO:0005730":null,"GO:0006364":null,"GO:0008097":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00323.1"],"transcripts_by_uniquename":{"SJAG_00323.1":null},"uniprot_identifier":"B6JVB6","uniquename":"SJAG_00323"}


id: SJAG_00324
data:
  {"coiled_coil_coords":[{"range":{"end":38,"start":18}},{"range":{"end":100,"start":55}},{"range":{"end":196,"start":150}},{"range":{"end":438,"start":411}}],"cv_annotations":{"cellular_component":[{"annotations":[99373],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[80983],"is_not":false,"summary":null,"term":"GO:0005783"},{"annotations":[80982],"is_not":false,"summary":null,"term":"GO:0042175"}],"molecular_function":[{"annotations":[80984],"is_not":false,"summary":null,"term":"GO:0003729"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB05318","InterPro:IPR039604","EnsemblGenomes-Gn:SJAG_00324","UniProtKB/TrEMBL:B6JVB7"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":275,"start":242}},{"range":{"end":323,"start":303}},{"range":{"end":472,"start":432}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"whr1","uniquename":"SJAG_00329"},{"name":"cis4","uniquename":"SJAG_00328"},{"name":"cdc45","uniquename":"SJAG_00327"},{"name":"pex7","uniquename":"SJAG_00326"},{"name":"trm401","uniquename":"SJAG_00325"},{"uniquename":"SJAG_00324"},{"name":"rrp16","uniquename":"SJAG_00323"},{"name":"sap145","uniquename":"SJAG_00322"},{"name":"plc1","uniquename":"SJAG_00321"},{"name":"shf1","uniquename":"SJAG_00320"},{"name":"pus2","uniquename":"SJAG_00319"}],"genes_by_uniquename":{"SJAG_00324":null,"SPAC458.02c":null,"YOR198C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PANTHER","id":"PTHR31027","interpro_description":"Nuclear segregation protein Bfr1","interpro_id":"IPR039604","interpro_name":"Bfr1","locations":[{"end":462,"start":4}],"match_end":462,"match_start":4,"name":"NUCLEAR SEGREGATION PROTEIN BFR1"},{"dbname":"COILS","id":"Coil","locations":[{"end":38,"start":18},{"end":100,"start":55},{"end":196,"start":150},{"end":438,"start":411}],"match_end":438,"match_start":18,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":275,"start":242},{"end":323,"start":303},{"end":472,"start":432}],"match_end":472,"match_start":242,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":472,"start":462}],"match_end":472,"match_start":462,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":317,"start":308}],"match_end":317,"match_start":308,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":265,"start":242},{"end":448,"start":432}],"match_end":448,"match_start":242,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3587535,"start_pos":3585990,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":270,"start":242}},{"range":{"end":371,"start":348}},{"range":{"end":445,"start":433}},{"range":{"end":471,"start":449}}],"ortholog_annotations":[{"gene_uniquename":"SJAG_00324","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC458.02c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00324","ortholog_taxonid":4932,"ortholog_uniquename":"YOR198C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00324","ortholog_taxonid":4932,"ortholog_uniquename":"YOR198C","reference_uniquename":"PMID:26896847"}],"product":"yeast Brf1 ortholog, implicated in mRNA localization, translation, mitosis, insertion into ER","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003729"]}},"subset_termids":["GO:0005783","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003729":null,"GO:0005783":null,"GO:0005829":null,"GO:0042175":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00324.1"],"transcripts_by_uniquename":{"SJAG_00324.1":null},"uniprot_identifier":"B6JVB7","uniquename":"SJAG_00324"}


id: SJAG_00325
data:
  {"active_sites":[{"assigned_by":"UniProtKB","range":{"end":344,"start":344}}],"binding_sites":[{"assigned_by":"UniProtKB","ligand":"S-adenosyl-L-methionine","range":{"end":202,"start":196}},{"assigned_by":"UniProtKB","ligand":"S-adenosyl-L-methionine","range":{"end":233,"start":233}},{"assigned_by":"UniProtKB","ligand":"S-adenosyl-L-methionine","range":{"end":260,"start":260}},{"assigned_by":"UniProtKB","ligand":"S-adenosyl-L-methionine","range":{"end":291,"start":291}}],"cv_annotations":{"biological_process":[{"annotations":[92269],"is_not":false,"summary":null,"term":"GO:0002946"}],"cellular_component":[{"annotations":[92267],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[81206],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[92271],"is_not":false,"summary":null,"term":"GO:0062152"},{"annotations":[81208],"is_not":false,"summary":null,"term":"GO:0016428"},{"annotations":[81210],"is_not":false,"summary":null,"term":"GO:0000049"}],"mondo":[{"annotations":[88895],"is_not":false,"summary":null,"term":"MONDO:0012613"}]},"dbxrefs":["InterPro:IPR001678","InterPro:IPR023267","UniProtKB/TrEMBL:B6JVB8","EnsemblGenomes-Tr:EEB05319","InterPro:IPR029063","EnsemblGenomes-Gn:SJAG_00325","InterPro:IPR018314","InterPro:IPR023270","GOA:B6JVB8"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":520,"start":484}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"sec18","uniquename":"SJAG_00330"},{"name":"whr1","uniquename":"SJAG_00329"},{"name":"cis4","uniquename":"SJAG_00328"},{"name":"cdc45","uniquename":"SJAG_00327"},{"name":"pex7","uniquename":"SJAG_00326"},{"name":"trm401","uniquename":"SJAG_00325"},{"uniquename":"SJAG_00324"},{"name":"rrp16","uniquename":"SJAG_00323"},{"name":"sap145","uniquename":"SJAG_00322"},{"name":"plc1","uniquename":"SJAG_00321"},{"name":"shf1","uniquename":"SJAG_00320"}],"genes_by_uniquename":{"HGNC:25994":null,"SJAG_00325":null,"SPAC17D4.04":null,"YBL024W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"16S rRNA methyltransferase RsmB/F","id":"PF01189","interpro_description":"SAM-dependent methyltransferase RsmB-F/NOP2-type, catalytic core","interpro_id":"IPR049560","interpro_name":"MeTrfase_RsmB-F_NOP2_cat","locations":[{"end":449,"start":183}],"match_end":449,"match_start":183,"name":"Methyltr_RsmB-F"},{"dbname":"PROSITE_PATTERNS","description":"NOL1/NOP2/sun family signature.","id":"PS01153","interpro_description":"RsmB/NOL1/NOP2-like, conserved site","interpro_id":"IPR018314","interpro_name":"RsmB/NOL1/NOP2-like_CS","locations":[{"end":296,"start":285}],"match_end":296,"match_start":285,"name":"NOL1_NOP2_SUN"},{"dbname":"PROSITE_PROFILES","description":"SAM-dependent MTase RsmB/NOP-type domain profile.","id":"PS51686","interpro_description":"SAM-dependent methyltransferase RsmB-F/NOP2-type domain","interpro_id":"IPR001678","interpro_name":"MeTrfase_RsmB-F_NOP2_dom","locations":[{"end":452,"start":78}],"match_end":452,"match_start":78,"name":"SAM_MT_RSMB_NOP"},{"dbname":"PRINTS","description":"RNA (C5-cytosine) methyltransferase signature","id":"PR02008","interpro_description":"RNA (C5-cytosine) methyltransferase","interpro_id":"IPR023267","interpro_name":"RCMT","locations":[{"end":203,"start":193},{"end":298,"start":286},{"end":352,"start":336},{"end":451,"start":434}],"match_end":451,"match_start":193,"name":"RCMTFAMILY"},{"dbname":"PRINTS","description":"RNA (C5-cytosine) methyltransferase NCL1 subfamily signature","id":"PR02011","interpro_description":"tRNA (C5-cytosine) methyltransferase, NCL1","interpro_id":"IPR023270","interpro_name":"RCMT_NCL1","locations":[{"end":160,"start":139},{"end":389,"start":370},{"end":599,"start":587}],"match_end":599,"match_start":139,"name":"RCMTNCL1"},{"dbname":"SUPERFAMILY","id":"SSF53335","interpro_description":"S-adenosyl-L-methionine-dependent methyltransferase superfamily","interpro_id":"IPR029063","interpro_name":"SAM-dependent_MTases_sf","locations":[{"end":93,"start":64},{"end":385,"start":128},{"end":451,"start":428}],"match_end":451,"match_start":64,"name":"S-adenosyl-L-methionine-dependent methyltransferases"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.150","interpro_description":"S-adenosyl-L-methionine-dependent methyltransferase superfamily","interpro_id":"IPR029063","interpro_name":"SAM-dependent_MTases_sf","locations":[{"end":380,"start":53},{"end":451,"start":425}],"match_end":451,"match_start":53,"name":"Vaccinia Virus protein VP39"},{"dbname":"PANTHER","id":"PTHR22808","interpro_description":"RNA (C5-cytosine) methyltransferase","interpro_id":"IPR023267","interpro_name":"RCMT","locations":[{"end":736,"start":35}],"match_end":736,"match_start":35,"name":"NCL1 YEAST -RELATED NOL1/NOP2/FMU SUN  DOMAIN-CONTAINING"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":520,"start":484}],"match_end":520,"match_start":484,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":520,"start":509}],"match_end":520,"match_start":509,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":508,"start":496}],"match_end":508,"match_start":496,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3585760,"start_pos":3583303,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":42,"start":25}},{"range":{"end":489,"start":478}}],"name":"trm401","ortholog_annotations":[{"gene_uniquename":"SJAG_00325","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:25994","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00325","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC17D4.04","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00325","ortholog_taxonid":4932,"ortholog_uniquename":"YBL024W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00325","ortholog_taxonid":4932,"ortholog_uniquename":"YBL024W","reference_uniquename":"PMID:26896847"}],"product":"tRNA (cytosine-5-)-methyltransferase","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0000049"],"not-binding":["GO:0016428","GO:0062152"]}},"subset_termids":["GO:0005634","MONDO:0037792","GO:0140101","MONDO:0006025","GO:0140098","MONDO:0005066","GO:0016741","GO:0005829","GO:0006399"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000049":null,"GO:0002946":null,"GO:0005634":null,"GO:0005829":null,"GO:0016428":null,"GO:0062152":null,"MONDO:0012613":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00325.1"],"transcripts_by_uniquename":{"SJAG_00325.1":null},"uniprot_identifier":"B6JVB8","uniquename":"SJAG_00325"}


id: SJAG_00326
data:
  {"cv_annotations":{"biological_process":[{"annotations":[72395],"is_not":false,"summary":null,"term":"GO:0016558"},{"annotations":[92248],"is_not":false,"summary":null,"term":"GO:0006625"}],"cellular_component":[{"annotations":[72394],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[92245],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[72393],"is_not":false,"summary":null,"term":"GO:0005782"}],"molecular_function":[{"annotations":[72392],"is_not":false,"summary":null,"term":"GO:0005053"}],"mondo":[{"annotations":[88094],"is_not":false,"summary":null,"term":"MONDO:0009958"},{"annotations":[89049],"is_not":false,"summary":null,"term":"MONDO:0013945"},{"annotations":[87828],"is_not":false,"summary":null,"term":"MONDO:0008972"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_00326","UniProtKB/TrEMBL:B6JVB9","InterPro:IPR017986","InterPro:IPR019775","InterPro:IPR020472","EnsemblGenomes-Tr:EEB05320","InterPro:IPR001680","InterPro:IPR015943","InterPro:IPR036322"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mak1","uniquename":"SJAG_00331"},{"name":"sec18","uniquename":"SJAG_00330"},{"name":"whr1","uniquename":"SJAG_00329"},{"name":"cis4","uniquename":"SJAG_00328"},{"name":"cdc45","uniquename":"SJAG_00327"},{"name":"pex7","uniquename":"SJAG_00326"},{"name":"trm401","uniquename":"SJAG_00325"},{"uniquename":"SJAG_00324"},{"name":"rrp16","uniquename":"SJAG_00323"},{"name":"sap145","uniquename":"SJAG_00322"},{"name":"plc1","uniquename":"SJAG_00321"}],"genes_by_uniquename":{"HGNC:8860":null,"SJAG_00326":null,"SPAC17D4.01":null,"YDR142C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"WD domain, G-beta repeat","id":"PF00400","interpro_description":"WD40 repeat","interpro_id":"IPR001680","interpro_name":"WD40_rpt","locations":[{"end":133,"start":96},{"end":176,"start":139},{"end":262,"start":223},{"end":305,"start":269}],"match_end":305,"match_start":96,"name":"WD40"},{"dbname":"PROSITE_PATTERNS","description":"Trp-Asp (WD) repeats signature.","id":"PS00678","interpro_description":"WD40 repeat, conserved site","interpro_id":"IPR019775","interpro_name":"WD40_repeat_CS","locations":[{"end":177,"start":163},{"end":263,"start":249}],"match_end":263,"match_start":163,"name":"WD_REPEATS_1"},{"dbname":"PROSITE_PROFILES","description":"Trp-Asp (WD) repeats circular profile.","id":"PS50294","locations":[{"end":178,"start":143},{"end":266,"start":229}],"match_end":266,"match_start":143,"name":"WD_REPEATS_REGION"},{"dbname":"PROSITE_PROFILES","description":"Trp-Asp (WD) repeats profile.","id":"PS50082","interpro_description":"WD40 repeat","interpro_id":"IPR001680","interpro_name":"WD40_rpt","locations":[{"end":178,"start":100},{"end":271,"start":229}],"match_end":271,"match_start":100,"name":"WD_REPEATS_2"},{"dbname":"SMART","id":"SM00320","interpro_description":"WD40 repeat","interpro_id":"IPR001680","interpro_name":"WD40_rpt","locations":[{"end":133,"start":93},{"end":176,"start":136},{"end":218,"start":179},{"end":262,"start":222},{"end":306,"start":265}],"match_end":306,"match_start":93,"name":"WD40_4"},{"dbname":"PRINTS","description":"G protein beta WD-40 repeat signature","id":"PR00320","interpro_description":"G-protein beta WD-40 repeat","interpro_id":"IPR020472","interpro_name":"G-protein_beta_WD-40_rep","locations":[{"end":134,"start":120},{"end":177,"start":163},{"end":263,"start":249}],"match_end":263,"match_start":120,"name":"GPROTEINBRPT"},{"dbname":"SUPERFAMILY","id":"SSF50978","interpro_description":"WD40-repeat-containing domain superfamily","interpro_id":"IPR036322","interpro_name":"WD40_repeat_dom_sf","locations":[{"end":306,"start":13}],"match_end":306,"match_start":13,"name":"WD40 repeat-like"},{"dbname":"GENE3D","id":"G3DSA:2.130.10.10","interpro_description":"WD40/YVTN repeat-like-containing domain superfamily","interpro_id":"IPR015943","interpro_name":"WD40/YVTN_repeat-like_dom_sf","locations":[{"end":306,"start":1}],"match_end":306,"match_start":1},{"dbname":"PANTHER","id":"PTHR46027","interpro_description":"Peroxisomal targeting signal 2 receptor","interpro_id":"IPR044536","interpro_name":"PEX7","locations":[{"end":309,"start":1}],"match_end":309,"match_start":1,"name":"PEROXISOMAL TARGETING SIGNAL 2 RECEPTOR"}],"location":{"chromosome_name":"supercont5.1","end_pos":3582681,"start_pos":3581636,"strand":"reverse"},"name":"pex7","ortholog_annotations":[{"gene_uniquename":"SJAG_00326","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:8860","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00326","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC17D4.01","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00326","ortholog_taxonid":4932,"ortholog_uniquename":"YDR142C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00326","ortholog_taxonid":4932,"ortholog_uniquename":"YDR142C","reference_uniquename":"PMID:26896847"}],"product":"peroxin-7","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005053"]}},"subset_termids":["MONDO:0005328","GO:0006605","MONDO:0006025","GO:0055085","GO:0005829","GO:0005777","GO:0005634","MONDO:0005066","MONDO:0005559","MONDO:0019053","GO:0007031","GO:0005048","MONDO:0005244","MONDO:0002525"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005053":null,"GO:0005634":null,"GO:0005782":null,"GO:0005829":null,"GO:0006625":null,"GO:0016558":null,"MONDO:0008972":null,"MONDO:0009958":null,"MONDO:0013945":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00326.1"],"transcripts_by_uniquename":{"SJAG_00326.1":null},"uniprot_identifier":"B6JVB9","uniquename":"SJAG_00326"}


id: SJAG_00327
data:
  {"coiled_coil_coords":[{"range":{"end":82,"start":62}},{"range":{"end":462,"start":442}}],"cv_annotations":{"biological_process":[{"annotations":[80016],"is_not":false,"summary":null,"term":"GO:0006270"},{"annotations":[80013],"is_not":false,"summary":null,"term":"GO:0000727"},{"annotations":[80014],"is_not":false,"summary":null,"term":"GO:1902977"},{"annotations":[92258],"is_not":false,"summary":null,"term":"GO:0031573"}],"cellular_component":[{"annotations":[92250],"is_not":false,"summary":null,"term":"GO:0000785"},{"annotations":[92251],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[80015],"is_not":false,"summary":null,"term":"GO:0031261"},{"annotations":[92253],"is_not":false,"summary":null,"term":"GO:0043596"}],"molecular_function":[{"annotations":[80017],"is_not":false,"summary":null,"term":"GO:0003682"},{"annotations":[80018],"is_not":false,"summary":null,"term":"GO:0003697"}],"mondo":[{"annotations":[87921],"is_not":false,"summary":null,"term":"MONDO:0014894"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_00327","UniProtKB/TrEMBL:B6JVC0","GOA:B6JVC0","EnsemblGenomes-Tr:EEB05321","InterPro:IPR003874"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":210,"start":152}},{"range":{"end":311,"start":292}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"klp3","uniquename":"SJAG_00332"},{"name":"mak1","uniquename":"SJAG_00331"},{"name":"sec18","uniquename":"SJAG_00330"},{"name":"whr1","uniquename":"SJAG_00329"},{"name":"cis4","uniquename":"SJAG_00328"},{"name":"cdc45","uniquename":"SJAG_00327"},{"name":"pex7","uniquename":"SJAG_00326"},{"name":"trm401","uniquename":"SJAG_00325"},{"uniquename":"SJAG_00324"},{"name":"rrp16","uniquename":"SJAG_00323"},{"name":"sap145","uniquename":"SJAG_00322"}],"genes_by_uniquename":{"HGNC:1739":null,"SJAG_00327":null,"SPAC17D4.02":null,"YLR103C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"CDC45","id":"PF02724","interpro_description":"CDC45","interpro_id":"IPR003874","interpro_name":"CDC45","locations":[{"end":638,"start":26}],"match_end":638,"match_start":26,"name":"CDC45"},{"dbname":"PANTHER","id":"PTHR10507","interpro_description":"CDC45","interpro_id":"IPR003874","interpro_name":"CDC45","locations":[{"end":638,"start":1}],"match_end":638,"match_start":1,"name":"CDC45-RELATED PROTEIN"},{"dbname":"COILS","id":"Coil","locations":[{"end":82,"start":62},{"end":462,"start":442}],"match_end":462,"match_start":62,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":210,"start":152},{"end":311,"start":292}],"match_end":311,"match_start":152,"name":"disorder_prediction"},{"dbname":"MOBIDB-Negative-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Negative-Polyelectrolyte","locations":[{"end":174,"start":163}],"match_end":174,"match_start":163,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":208,"start":197}],"match_end":208,"match_start":197,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3581329,"start_pos":3579319,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":176,"start":158}},{"range":{"end":195,"start":189}},{"range":{"end":215,"start":202}}],"name":"cdc45","ortholog_annotations":[{"gene_uniquename":"SJAG_00327","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:1739","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00327","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC17D4.02","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00327","ortholog_taxonid":4932,"ortholog_uniquename":"YLR103C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00327","ortholog_taxonid":4932,"ortholog_uniquename":"YLR103C","reference_uniquename":"PMID:26896847"}],"product":"DNA replication pre-initiation complex subunit Cdc45","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003682","GO:0003697"]}},"subset_termids":["GO:0006310","GO:0006281","GO:0005829","GO:0065003","MONDO:0006025","GO:0023052","GO:0005634","GO:0005654","GO:0006260","GO:0005694"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000727":null,"GO:0000785":null,"GO:0003682":null,"GO:0003697":null,"GO:0005829":null,"GO:0006270":null,"GO:0031261":null,"GO:0031573":null,"GO:0043596":null,"GO:1902977":null,"MONDO:0014894":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00327.1"],"transcripts_by_uniquename":{"SJAG_00327.1":null},"uniprot_identifier":"B6JVC0","uniquename":"SJAG_00327"}


id: SJAG_00328
data:
  {"cv_annotations":{"biological_process":[{"annotations":[76483],"is_not":false,"summary":null,"term":"GO:0006882"},{"annotations":[76482],"is_not":false,"summary":null,"term":"GO:1904257"}],"cellular_component":[{"annotations":[76481],"is_not":false,"summary":null,"term":"GO:0031410"},{"annotations":[63660],"is_not":false,"summary":null,"term":"GO:0005789"},{"annotations":[92262],"is_not":false,"summary":null,"term":"GO:0000139"}],"molecular_function":[{"annotations":[76479],"is_not":false,"summary":null,"term":"GO:0005385"}],"mondo":[{"annotations":[88007],"is_not":false,"summary":null,"term":"MONDO:0957595"}]},"dbxrefs":["InterPro:IPR002524","GOA:B6JVC1","EnsemblGenomes-Tr:EEB05322","InterPro:IPR027469","UniProtKB/TrEMBL:B6JVC1","EnsemblGenomes-Gn:SJAG_00328"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":538,"start":506}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pmo25","uniquename":"SJAG_00333"},{"name":"klp3","uniquename":"SJAG_00332"},{"name":"mak1","uniquename":"SJAG_00331"},{"name":"sec18","uniquename":"SJAG_00330"},{"name":"whr1","uniquename":"SJAG_00329"},{"name":"cis4","uniquename":"SJAG_00328"},{"name":"cdc45","uniquename":"SJAG_00327"},{"name":"pex7","uniquename":"SJAG_00326"},{"name":"trm401","uniquename":"SJAG_00325"},{"uniquename":"SJAG_00324"},{"name":"rrp16","uniquename":"SJAG_00323"}],"genes_by_uniquename":{"HGNC:19089":null,"HGNC:19306":null,"SJAG_00328":null,"SPAC17D4.03c":null,"YDR205W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Cation efflux family","id":"PF01545","interpro_description":"Cation efflux protein","interpro_id":"IPR002524","interpro_name":"Cation_efflux","locations":[{"end":626,"start":342}],"match_end":626,"match_start":342,"name":"Cation_efflux"},{"dbname":"SUPERFAMILY","id":"SSF161111","interpro_description":"Cation efflux transmembrane domain superfamily","interpro_id":"IPR027469","interpro_name":"Cation_efflux_TMD_sf","locations":[{"end":467,"start":337},{"end":626,"start":560}],"match_end":626,"match_start":337,"name":"Cation efflux protein transmembrane domain-like"},{"dbname":"GENE3D","id":"G3DSA:1.20.1510.10","interpro_description":"Cation efflux transmembrane domain superfamily","interpro_id":"IPR027469","interpro_name":"Cation_efflux_TMD_sf","locations":[{"end":495,"start":338},{"end":626,"start":542}],"match_end":626,"match_start":338,"name":"Cation efflux protein transmembrane domain"},{"dbname":"PANTHER","id":"PTHR45755","interpro_description":"Zinc transporter Msc2-like","interpro_id":"IPR045316","interpro_name":"Msc2-like","locations":[{"end":527,"start":45}],"match_end":527,"match_start":45},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":538,"start":506}],"match_end":538,"match_start":506,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":538,"start":512}],"match_end":538,"match_start":512,"name":"disorder_prediction"},{"dbname":"NCBIFAM","description":"cation diffusion facilitator family transporter","id":"TIGR01297","interpro_description":"Cation efflux protein","interpro_id":"IPR002524","interpro_name":"Cation_efflux","locations":[{"end":708,"start":339}],"match_end":708,"match_start":339,"name":"CDF"}],"location":{"chromosome_name":"supercont5.1","end_pos":3579260,"start_pos":3577110,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":15,"start":1}},{"range":{"end":161,"start":155}},{"range":{"end":284,"start":269}},{"range":{"end":427,"start":416}},{"range":{"end":483,"start":448}},{"range":{"end":544,"start":506}},{"range":{"end":564,"start":546}}],"name":"cis4","ortholog_annotations":[{"gene_uniquename":"SJAG_00328","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:19089","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00328","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:19306","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00328","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC17D4.03c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00328","ortholog_taxonid":4932,"ortholog_uniquename":"YDR205W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00328","ortholog_taxonid":4932,"ortholog_uniquename":"YDR205W","reference_uniquename":"PMID:26896847"}],"product":"Golgi zinc importer, CDF family, Cis4","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0005385"]}},"subset_termids":["GO:0098771","MONDO:0005046","GO:0022857","GO:0005789","GO:0005794","GO:0031410","MONDO:0005570","GO:0005783","GO:0055085"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000139":null,"GO:0005385":null,"GO:0005789":null,"GO:0006882":null,"GO:0031410":null,"GO:1904257":null,"MONDO:0957595":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":57,"start":40}},{"assigned_by":"TMHMM","range":{"end":94,"start":72}},{"assigned_by":"TMHMM","range":{"end":172,"start":156}},{"assigned_by":"TMHMM","range":{"end":199,"start":177}},{"assigned_by":"TMHMM","range":{"end":230,"start":212}},{"assigned_by":"TMHMM","range":{"end":255,"start":235}},{"assigned_by":"TMHMM","range":{"end":285,"start":268}},{"assigned_by":"TMHMM","range":{"end":320,"start":298}},{"assigned_by":"TMHMM","range":{"end":363,"start":341}},{"assigned_by":"TMHMM","range":{"end":392,"start":373}},{"assigned_by":"TMHMM","range":{"end":435,"start":413}},{"assigned_by":"TMHMM","range":{"end":464,"start":445}},{"assigned_by":"TMHMM","range":{"end":591,"start":569}},{"assigned_by":"TMHMM","range":{"end":623,"start":601}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00328.1"],"transcripts_by_uniquename":{"SJAG_00328.1":null},"uniprot_identifier":"B6JVC1","uniquename":"SJAG_00328"}


id: SJAG_00329
data:
  {"cv_annotations":{"biological_process":[{"annotations":[92976],"is_not":false,"summary":null,"term":"GO:0006283"}],"cellular_component":[{"annotations":[92975],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[92977],"is_not":false,"summary":null,"term":"GO:0005524"}]},"dbxrefs":["InterPro:IPR018865","EnsemblGenomes-Tr:EEB05323","EnsemblGenomes-Gn:SJAG_00329","UniProtKB/TrEMBL:B6JVC2"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":48,"start":23}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"alg9","uniquename":"SJAG_00334"},{"name":"pmo25","uniquename":"SJAG_00333"},{"name":"klp3","uniquename":"SJAG_00332"},{"name":"mak1","uniquename":"SJAG_00331"},{"name":"sec18","uniquename":"SJAG_00330"},{"name":"whr1","uniquename":"SJAG_00329"},{"name":"cis4","uniquename":"SJAG_00328"},{"name":"cdc45","uniquename":"SJAG_00327"},{"name":"pex7","uniquename":"SJAG_00326"},{"name":"trm401","uniquename":"SJAG_00325"},{"uniquename":"SJAG_00324"}],"genes_by_uniquename":{"HGNC:11398":null,"SJAG_00329":null,"SPAC1834.09":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Serine-threonine protein kinase 19","id":"PF10494","interpro_description":"Inactive serine/threonine-protein kinase 19-like","interpro_id":"IPR018865","interpro_name":"STK19-like","locations":[{"end":302,"start":88}],"match_end":302,"match_start":88,"name":"Stk19"},{"dbname":"PANTHER","id":"PTHR15243","interpro_description":"Inactive serine/threonine-protein kinase 19-like","interpro_id":"IPR018865","interpro_name":"STK19-like","locations":[{"end":303,"start":10}],"match_end":303,"match_start":10,"name":"SERINE/THREONINE-PROTEIN KINASE 19"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":48,"start":23}],"match_end":48,"match_start":23,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":41,"start":29}],"match_end":41,"match_start":29,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3575226,"start_pos":3574297,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":40,"start":22}},{"range":{"end":134,"start":122}},{"range":{"end":212,"start":203}}],"name":"whr1","ortholog_annotations":[{"gene_uniquename":"SJAG_00329","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11398","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00329","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1834.09","reference_uniquename":"PMID:21511999"}],"product":"Winged helix repair factor Whr1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005524"]}},"subset_termids":["GO:0006281","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005524":null,"GO:0005634":null,"GO:0006283":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00329.1"],"transcripts_by_uniquename":{"SJAG_00329.1":null},"uniprot_identifier":"B6JVC2","uniquename":"SJAG_00329"}


id: SJAG_00330
data:
  {"cv_annotations":{"biological_process":[{"annotations":[92980],"is_not":false,"summary":null,"term":"GO:0006888"},{"annotations":[71926],"is_not":false,"summary":null,"term":"GO:0043001"},{"annotations":[71927],"is_not":false,"summary":null,"term":"GO:0006891"},{"annotations":[92983],"is_not":false,"summary":null,"term":"GO:0006886"},{"annotations":[57627],"is_not":false,"summary":null,"term":"GO:0035494"},{"annotations":[92985],"is_not":false,"summary":null,"term":"GO:0042144"}],"cellular_component":[{"annotations":[71925],"is_not":false,"summary":null,"term":"GO:0005795"}],"molecular_function":[{"annotations":[57626],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[71924],"is_not":false,"summary":null,"term":"GO:0016887"}],"mondo":[{"annotations":[88326],"is_not":false,"summary":null,"term":"MONDO:0023659"}]},"dbxrefs":["InterPro:IPR039812","UniProtKB/TrEMBL:B6JVC3","InterPro:IPR009010","InterPro:IPR041569","InterPro:IPR003960","InterPro:IPR027417","EnsemblGenomes-Gn:SJAG_00330","EnsemblGenomes-Tr:EEB05324","GOA:B6JVC3","InterPro:IPR003338","InterPro:IPR003593","InterPro:IPR004201","InterPro:IPR029067","InterPro:IPR003959"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":55,"start":1}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"hht1","uniquename":"SJAG_00335"},{"name":"alg9","uniquename":"SJAG_00334"},{"name":"pmo25","uniquename":"SJAG_00333"},{"name":"klp3","uniquename":"SJAG_00332"},{"name":"mak1","uniquename":"SJAG_00331"},{"name":"sec18","uniquename":"SJAG_00330"},{"name":"whr1","uniquename":"SJAG_00329"},{"name":"cis4","uniquename":"SJAG_00328"},{"name":"cdc45","uniquename":"SJAG_00327"},{"name":"pex7","uniquename":"SJAG_00326"},{"name":"trm401","uniquename":"SJAG_00325"}],"genes_by_uniquename":{"HGNC:8016":null,"SJAG_00330":null,"SPAC1834.11c":null,"YBR080C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Cell division protein 48 (CDC48), domain 2","id":"PF02933","interpro_description":"CDC48, domain 2","interpro_id":"IPR004201","interpro_name":"Cdc48_dom2","locations":[{"end":205,"start":161}],"match_end":205,"match_start":161,"name":"CDC48_2"},{"dbname":"PFAM","description":"AAA+ lid domain","id":"PF17862","interpro_description":"AAA ATPase, AAA+ lid domain","interpro_id":"IPR041569","interpro_name":"AAA_lid_3","locations":[{"end":509,"start":473}],"match_end":509,"match_start":473,"name":"AAA_lid_3"},{"dbname":"PFAM","description":"ATPase family associated with various cellular activities (AAA)","id":"PF00004","interpro_description":"ATPase, AAA-type, core","interpro_id":"IPR003959","interpro_name":"ATPase_AAA_core","locations":[{"end":446,"start":306},{"end":716,"start":587}],"match_end":716,"match_start":306,"name":"AAA"},{"dbname":"CDD","description":"RecA-like_NSF-SEC18_r1-like","id":"cd19504","locations":[{"end":445,"start":269}],"match_end":445,"match_start":269,"name":"RecA-like_NSF-SEC18_r1-like"},{"dbname":"PROSITE_PATTERNS","description":"AAA-protein family signature.","id":"PS00674","interpro_description":"ATPase, AAA-type, conserved site","interpro_id":"IPR003960","interpro_name":"ATPase_AAA_CS","locations":[{"end":435,"start":417}],"match_end":435,"match_start":417,"name":"AAA"},{"dbname":"SMART","id":"SM01072","interpro_description":"CDC48, domain 2","interpro_id":"IPR004201","interpro_name":"Cdc48_dom2","locations":[{"end":234,"start":160}],"match_end":234,"match_start":160,"name":"CDC48_2_2"},{"dbname":"SMART","id":"SM01073","interpro_description":"CDC48, N-terminal subdomain","interpro_id":"IPR003338","interpro_name":"CDC4_N-term_subdom","locations":[{"end":133,"start":57}],"match_end":133,"match_start":57,"name":"CDC48_N_2"},{"dbname":"SMART","id":"SM00382","interpro_description":"AAA+ ATPase domain","interpro_id":"IPR003593","interpro_name":"AAA+_ATPase","locations":[{"end":449,"start":302},{"end":719,"start":583}],"match_end":719,"match_start":302,"name":"AAA_5"},{"dbname":"FUNFAM","description":"Vesicular-fusion ATPase SEC18","id":"G3DSA:3.40.50.300:FF:000187","locations":[{"end":448,"start":258}],"match_end":448,"match_start":258},{"dbname":"FUNFAM","description":"vesicle-fusing ATPase isoform X1","id":"G3DSA:1.10.8.60:FF:000026","locations":[{"end":536,"start":448}],"match_end":536,"match_start":448},{"dbname":"FUNFAM","description":"vesicle-fusing ATPase isoform X1","id":"G3DSA:3.40.50.300:FF:000166","locations":[{"end":716,"start":545}],"match_end":716,"match_start":545},{"dbname":"FUNFAM","description":"Vesicle-fusing ATPase protein","id":"G3DSA:2.40.40.20:FF:000012","locations":[{"end":130,"start":55}],"match_end":130,"match_start":55},{"dbname":"SUPERFAMILY","id":"SSF52540","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":753,"start":270}],"match_end":753,"match_start":270,"name":"P-loop containing nucleoside triphosphate hydrolases"},{"dbname":"SUPERFAMILY","id":"SSF50692","interpro_description":"Aspartate decarboxylase-like domain superfamily","interpro_id":"IPR009010","interpro_name":"Asp_de-COase-like_dom_sf","locations":[{"end":134,"start":57}],"match_end":134,"match_start":57,"name":"ADC-like"},{"dbname":"SUPERFAMILY","id":"SSF54585","interpro_description":"CDC48 domain 2-like superfamily","interpro_id":"IPR029067","interpro_name":"CDC48_domain_2-like_sf","locations":[{"end":251,"start":136}],"match_end":251,"match_start":136,"name":"Cdc48 domain 2-like"},{"dbname":"GENE3D","id":"G3DSA:2.40.40.20","locations":[{"end":130,"start":53}],"match_end":130,"match_start":53},{"dbname":"GENE3D","id":"G3DSA:3.10.330.10","locations":[{"end":236,"start":133}],"match_end":236,"match_start":133},{"dbname":"GENE3D","id":"G3DSA:3.40.50.300","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":448,"start":259},{"end":716,"start":546}],"match_end":716,"match_start":259},{"dbname":"GENE3D","id":"G3DSA:1.10.8.60","locations":[{"end":545,"start":449},{"end":785,"start":717}],"match_end":785,"match_start":449},{"dbname":"PANTHER","id":"PTHR23078","interpro_description":"Vesicle-fusing ATPase","interpro_id":"IPR039812","interpro_name":"Vesicle-fus_ATPase","locations":[{"end":788,"start":57}],"match_end":788,"match_start":57,"name":"VESICULAR-FUSION PROTEIN NSF"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":55,"start":1}],"match_end":55,"match_start":1,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3573678,"start_pos":3571176,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":659,"start":646}}],"name":"sec18","ortholog_annotations":[{"gene_uniquename":"SJAG_00330","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:8016","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00330","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1834.11c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00330","ortholog_taxonid":4932,"ortholog_uniquename":"YBR080C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00330","ortholog_taxonid":4932,"ortholog_uniquename":"YBR080C","reference_uniquename":"PMID:26896847"}],"product":"secretory pathway ATPase Sec18","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005524"],"not-binding":["GO:0016887"]}},"subset_termids":["GO:0005794","MONDO:0005027","GO:0016887","GO:0016192","MONDO:0700092"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005524":null,"GO:0005795":null,"GO:0006886":null,"GO:0006888":null,"GO:0006891":null,"GO:0016887":null,"GO:0035494":null,"GO:0042144":null,"GO:0043001":null,"MONDO:0023659":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00330.1"],"transcripts_by_uniquename":{"SJAG_00330.1":null},"uniprot_identifier":"B6JVC3","uniquename":"SJAG_00330"}


id: SJAG_00331
data:
  {"coiled_coil_coords":[{"range":{"end":1145,"start":1125}}],"cv_annotations":{"PSI-MOD":[{"annotations":[82393],"is_not":false,"summary":null,"term":"MOD:00042"}],"biological_process":[{"annotations":[79622],"is_not":false,"summary":null,"term":"GO:0000160"}],"cellular_component":[{"annotations":[92968],"is_not":false,"summary":null,"term":"GO:0032153"},{"annotations":[92969],"is_not":false,"summary":null,"term":"GO:0051286"},{"annotations":[92971],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[79619],"is_not":false,"summary":null,"term":"GO:0005886"}],"molecular_function":[{"annotations":[68008],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[79620],"is_not":false,"summary":null,"term":"GO:0009927"},{"annotations":[79621],"is_not":false,"summary":null,"term":"GO:0000155"}]},"dbxrefs":["InterPro:IPR036097","InterPro:IPR013655","InterPro:IPR036890","InterPro:IPR000014","InterPro:IPR004358","GOA:B6JVC4","EnsemblGenomes-Tr:EEB05325","InterPro:IPR003594","InterPro:IPR000700","InterPro:IPR003661","InterPro:IPR011006","InterPro:IPR005467","UniProtKB/TrEMBL:B6JVC4","InterPro:IPR035965","EnsemblGenomes-Gn:SJAG_00331","InterPro:IPR001789","InterPro:IPR001610","InterPro:IPR013656"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":180,"start":159}},{"range":{"end":292,"start":237}},{"range":{"end":525,"start":459}},{"range":{"end":631,"start":600}},{"range":{"end":771,"start":738}},{"range":{"end":862,"start":842}},{"range":{"end":1447,"start":1422}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"hhf1","uniquename":"SJAG_00336"},{"name":"hht1","uniquename":"SJAG_00335"},{"name":"alg9","uniquename":"SJAG_00334"},{"name":"pmo25","uniquename":"SJAG_00333"},{"name":"klp3","uniquename":"SJAG_00332"},{"name":"mak1","uniquename":"SJAG_00331"},{"name":"sec18","uniquename":"SJAG_00330"},{"name":"whr1","uniquename":"SJAG_00329"},{"name":"cis4","uniquename":"SJAG_00328"},{"name":"cdc45","uniquename":"SJAG_00327"},{"name":"pex7","uniquename":"SJAG_00326"}],"genes_by_uniquename":{"SJAG_00331":null,"SPAC1834.08":null,"YIL147C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"His Kinase A (phospho-acceptor) domain","id":"PF00512","interpro_description":"Signal transduction histidine kinase, dimerisation/phosphoacceptor domain","interpro_id":"IPR003661","interpro_name":"HisK_dim/P_dom","locations":[{"end":1210,"start":1146}],"match_end":1210,"match_start":1146,"name":"HisKA"},{"dbname":"PFAM","description":"Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase","id":"PF02518","interpro_description":"Histidine kinase/HSP90-like ATPase domain","interpro_id":"IPR003594","interpro_name":"HATPase_dom","locations":[{"end":1371,"start":1257}],"match_end":1371,"match_start":1257,"name":"HATPase_c"},{"dbname":"PFAM","description":"PAS fold","id":"PF08447","interpro_description":"PAS fold-3","interpro_id":"IPR013655","interpro_name":"PAS_fold_3","locations":[{"end":1117,"start":1030}],"match_end":1117,"match_start":1030,"name":"PAS_3"},{"dbname":"PFAM","description":"PAS fold","id":"PF08448","interpro_description":"PAS fold-4","interpro_id":"IPR013656","interpro_name":"PAS_4","locations":[{"end":991,"start":885}],"match_end":991,"match_start":885,"name":"PAS_4"},{"dbname":"PFAM","description":"Response regulator receiver domain","id":"PF00072","interpro_description":"Signal transduction response regulator, receiver domain","interpro_id":"IPR001789","interpro_name":"Sig_transdc_resp-reg_receiver","locations":[{"end":1758,"start":1640}],"match_end":1758,"match_start":1640,"name":"Response_reg"},{"dbname":"CDD","description":"REC_hyHK_CKI1_RcsC-like","id":"cd17546","locations":[{"end":1754,"start":1640}],"match_end":1754,"match_start":1640,"name":"REC_hyHK_CKI1_RcsC-like"},{"dbname":"CDD","description":"HisKA","id":"cd00082","interpro_description":"Signal transduction histidine kinase, dimerisation/phosphoacceptor domain","interpro_id":"IPR003661","interpro_name":"HisK_dim/P_dom","locations":[{"end":1206,"start":1143}],"match_end":1206,"match_start":1143,"name":"HisKA"},{"dbname":"CDD","description":"HATPase_EvgS-ArcB-TorS-like","id":"cd16922","locations":[{"end":1374,"start":1262}],"match_end":1374,"match_start":1262,"name":"HATPase_EvgS-ArcB-TorS-like"},{"dbname":"CDD","description":"PAS","id":"cd00130","interpro_description":"PAS domain","interpro_id":"IPR000014","interpro_name":"PAS","locations":[{"end":987,"start":897},{"end":1122,"start":1017}],"match_end":1122,"match_start":897,"name":"PAS"},{"dbname":"PROSITE_PROFILES","description":"Histidine kinase domain profile.","id":"PS50109","interpro_description":"Histidine kinase domain","interpro_id":"IPR005467","interpro_name":"His_kinase_dom","locations":[{"end":1376,"start":1152}],"match_end":1376,"match_start":1152,"name":"HIS_KIN"},{"dbname":"PROSITE_PROFILES","description":"PAC domain profile.","id":"PS50113","interpro_description":"PAS-associated, C-terminal","interpro_id":"IPR000700","interpro_name":"PAS-assoc_C","locations":[{"end":999,"start":947}],"match_end":999,"match_start":947,"name":"PAC"},{"dbname":"PROSITE_PROFILES","description":"PAS repeat profile.","id":"PS50112","interpro_description":"PAS domain","interpro_id":"IPR000014","interpro_name":"PAS","locations":[{"end":944,"start":874},{"end":1062,"start":1006}],"match_end":1062,"match_start":874,"name":"PAS"},{"dbname":"PROSITE_PROFILES","description":"Response regulatory domain profile.","id":"PS50110","interpro_description":"Signal transduction response regulator, receiver domain","interpro_id":"IPR001789","interpro_name":"Sig_transdc_resp-reg_receiver","locations":[{"end":1762,"start":1639}],"match_end":1762,"match_start":1639,"name":"RESPONSE_REGULATORY"},{"dbname":"SMART","id":"SM00388","interpro_description":"Signal transduction histidine kinase, dimerisation/phosphoacceptor domain","interpro_id":"IPR003661","interpro_name":"HisK_dim/P_dom","locations":[{"end":1210,"start":1145}],"match_end":1210,"match_start":1145,"name":"HisKA_10"},{"dbname":"SMART","id":"SM00091","interpro_description":"PAS domain","interpro_id":"IPR000014","interpro_name":"PAS","locations":[{"end":942,"start":876},{"end":1074,"start":1008}],"match_end":1074,"match_start":876,"name":"pas_2"},{"dbname":"SMART","id":"SM00448","interpro_description":"Signal transduction response regulator, receiver domain","interpro_id":"IPR001789","interpro_name":"Sig_transdc_resp-reg_receiver","locations":[{"end":1758,"start":1638}],"match_end":1758,"match_start":1638,"name":"REC_2"},{"dbname":"SMART","id":"SM00387","interpro_description":"Histidine kinase/HSP90-like ATPase domain","interpro_id":"IPR003594","interpro_name":"HATPase_dom","locations":[{"end":1376,"start":1257}],"match_end":1376,"match_start":1257,"name":"HKATPase_4"},{"dbname":"SMART","id":"SM00086","interpro_description":"PAC motif","interpro_id":"IPR001610","interpro_name":"PAC","locations":[{"end":990,"start":948},{"end":1125,"start":1082}],"match_end":1125,"match_start":948,"name":"pac_2"},{"dbname":"PRINTS","description":"Bacterial sensor protein C-terminal signature","id":"PR00344","interpro_description":"Signal transduction histidine kinase-related protein, C-terminal","interpro_id":"IPR004358","interpro_name":"Sig_transdc_His_kin-like_C","locations":[{"end":1315,"start":1301},{"end":1329,"start":1319},{"end":1354,"start":1336}],"match_end":1354,"match_start":1301,"name":"BCTRLSENSOR"},{"dbname":"FUNFAM","description":"Sensor histidine kinase RcsC","id":"G3DSA:3.30.565.10:FF:000010","locations":[{"end":1378,"start":1209}],"match_end":1378,"match_start":1209},{"dbname":"FUNFAM","description":"Two-component osmosensing histidine kinase","id":"G3DSA:1.10.287.130:FF:000002","locations":[{"end":1211,"start":1132}],"match_end":1211,"match_start":1132},{"dbname":"SUPERFAMILY","id":"SSF55874","interpro_description":"Histidine kinase/HSP90-like ATPase superfamily","interpro_id":"IPR036890","interpro_name":"HATPase_C_sf","locations":[{"end":1369,"start":1199}],"match_end":1369,"match_start":1199,"name":"ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase"},{"dbname":"SUPERFAMILY","id":"SSF52172","interpro_description":"CheY-like superfamily","interpro_id":"IPR011006","interpro_name":"CheY-like_superfamily","locations":[{"end":1760,"start":1637}],"match_end":1760,"match_start":1637,"name":"CheY-like"},{"dbname":"SUPERFAMILY","id":"SSF47384","interpro_description":"Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily","interpro_id":"IPR036097","interpro_name":"HisK_dim/P_sf","locations":[{"end":1210,"start":1128}],"match_end":1210,"match_start":1128,"name":"Homodimeric domain of signal transducing histidine kinase"},{"dbname":"SUPERFAMILY","id":"SSF55785","interpro_description":"PAS domain superfamily","interpro_id":"IPR035965","interpro_name":"PAS-like_dom_sf","locations":[{"end":992,"start":881},{"end":1126,"start":1013}],"match_end":1126,"match_start":881,"name":"PYP-like sensor domain (PAS domain)"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.2300","locations":[{"end":1759,"start":1618}],"match_end":1759,"match_start":1618},{"dbname":"GENE3D","id":"G3DSA:1.10.287.130","locations":[{"end":1208,"start":1122}],"match_end":1208,"match_start":1122},{"dbname":"GENE3D","id":"G3DSA:3.30.450.20","locations":[{"end":1121,"start":875}],"match_end":1121,"match_start":875,"name":"PAS domain"},{"dbname":"GENE3D","id":"G3DSA:3.30.565.10","interpro_description":"Histidine kinase/HSP90-like ATPase superfamily","interpro_id":"IPR036890","interpro_name":"HATPase_C_sf","locations":[{"end":1379,"start":1209}],"match_end":1379,"match_start":1209},{"dbname":"PANTHER","id":"PTHR43047","locations":[{"end":1761,"start":262}],"match_end":1761,"match_start":262,"name":"TWO-COMPONENT HISTIDINE PROTEIN KINASE"},{"dbname":"COILS","id":"Coil","locations":[{"end":1145,"start":1125}],"match_end":1145,"match_start":1125,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":180,"start":159},{"end":292,"start":237},{"end":525,"start":459},{"end":631,"start":600},{"end":771,"start":738},{"end":862,"start":842},{"end":1447,"start":1422}],"match_end":1447,"match_start":159,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":279,"start":250},{"end":484,"start":468}],"match_end":484,"match_start":250,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":169,"start":159},{"end":249,"start":240},{"end":631,"start":621},{"end":1447,"start":1433}],"match_end":1447,"match_start":159,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":763,"start":738}],"match_end":763,"match_start":738,"name":"disorder_prediction"},{"dbname":"NCBIFAM","description":"PAS domain S-box protein","id":"TIGR00229","interpro_description":"PAS domain","interpro_id":"IPR000014","interpro_name":"PAS","locations":[{"end":996,"start":876},{"end":1132,"start":1010}],"match_end":1132,"match_start":876,"name":"sensory_box"}],"location":{"chromosome_name":"supercont5.1","end_pos":3570808,"start_pos":3565475,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":84,"start":64}},{"range":{"end":121,"start":106}},{"range":{"end":232,"start":214}},{"range":{"end":265,"start":249}},{"range":{"end":278,"start":267}},{"range":{"end":483,"start":467}},{"range":{"end":564,"start":553}},{"range":{"end":746,"start":732}},{"range":{"end":813,"start":799}}],"name":"mak1","ortholog_annotations":[{"gene_uniquename":"SJAG_00331","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1834.08","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00331","ortholog_taxonid":4932,"ortholog_uniquename":"YIL147C","reference_uniquename":"PMID:29761456"}],"product":"phosphorelay sensor kinase Mak1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null,"PMID:36408920":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005524"],"not-binding":["GO:0000155","GO:0009927"]}},"subset_termids":["GO:0140299","GO:0023052","GO:0005829","GO:0005886","GO:0140096","GO:0016301","GO:0098772","GO:0004672"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000155":null,"GO:0000160":null,"GO:0005524":null,"GO:0005829":null,"GO:0005886":null,"GO:0009927":null,"GO:0032153":null,"GO:0051286":null,"MOD:00042":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00331.1"],"transcripts_by_uniquename":{"SJAG_00331.1":null},"uniprot_identifier":"B6JVC4","uniquename":"SJAG_00331"}


id: SJAG_00332
data:
  {"binding_sites":[{"assigned_by":"UniProtKB","ligand":"ATP","range":{"end":91,"start":84}}],"cv_annotations":{"biological_process":[{"annotations":[92960],"is_not":false,"summary":null,"term":"GO:0007163"},{"annotations":[92961],"is_not":false,"summary":null,"term":"GO:0006887"},{"annotations":[92962],"is_not":false,"summary":null,"term":"GO:0006886"},{"annotations":[92963],"is_not":false,"summary":null,"term":"GO:0000301"},{"annotations":[92964],"is_not":false,"summary":null,"term":"GO:0010970"}],"cellular_component":[{"annotations":[92957],"is_not":false,"summary":null,"term":"GO:0005938"},{"annotations":[92958],"is_not":false,"summary":null,"term":"GO:0005881"},{"annotations":[77682],"is_not":false,"summary":null,"term":"GO:0005871"}],"molecular_function":[{"annotations":[65389],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[77677],"is_not":false,"summary":null,"term":"GO:0016887"},{"annotations":[77678],"is_not":false,"summary":null,"term":"GO:0008017"},{"annotations":[77679],"is_not":false,"summary":null,"term":"GO:0008574"}]},"dbxrefs":["InterPro:IPR001752","EnsemblGenomes-Gn:SJAG_00332","InterPro:IPR019821","InterPro:IPR027417","InterPro:IPR036961","UniProtKB/TrEMBL:B6JVC5","EnsemblGenomes-Tr:EEB05326","GOA:B6JVC5"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":437,"start":395}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"aro1","uniquename":"SJAG_00337"},{"name":"hhf1","uniquename":"SJAG_00336"},{"name":"hht1","uniquename":"SJAG_00335"},{"name":"alg9","uniquename":"SJAG_00334"},{"name":"pmo25","uniquename":"SJAG_00333"},{"name":"klp3","uniquename":"SJAG_00332"},{"name":"mak1","uniquename":"SJAG_00331"},{"name":"sec18","uniquename":"SJAG_00330"},{"name":"whr1","uniquename":"SJAG_00329"},{"name":"cis4","uniquename":"SJAG_00328"},{"name":"cdc45","uniquename":"SJAG_00327"}],"genes_by_uniquename":{"HGNC:6324":null,"SJAG_00332":null,"SPAC1834.07":null,"YKL079W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Kinesin motor domain","id":"PF00225","interpro_description":"Kinesin motor domain","interpro_id":"IPR001752","interpro_name":"Kinesin_motor_dom","locations":[{"end":324,"start":9}],"match_end":324,"match_start":9,"name":"Kinesin"},{"dbname":"CDD","description":"KISc_KHC_KIF5","id":"cd01369","locations":[{"end":324,"start":1}],"match_end":324,"match_start":1,"name":"KISc_KHC_KIF5"},{"dbname":"PROSITE_PATTERNS","description":"Kinesin motor domain signature.","id":"PS00411","interpro_description":"Kinesin motor domain, conserved site","interpro_id":"IPR019821","interpro_name":"Kinesin_motor_CS","locations":[{"end":235,"start":224}],"match_end":235,"match_start":224,"name":"KINESIN_MOTOR_1"},{"dbname":"PROSITE_PROFILES","description":"Kinesin motor domain profile.","id":"PS50067","interpro_description":"Kinesin motor domain","interpro_id":"IPR001752","interpro_name":"Kinesin_motor_dom","locations":[{"end":324,"start":3}],"match_end":324,"match_start":3,"name":"KINESIN_MOTOR_2"},{"dbname":"SMART","id":"SM00129","interpro_description":"Kinesin motor domain","interpro_id":"IPR001752","interpro_name":"Kinesin_motor_dom","locations":[{"end":332,"start":1}],"match_end":332,"match_start":1,"name":"kinesin_4"},{"dbname":"PRINTS","description":"Kinesin heavy chain signature","id":"PR00380","interpro_description":"Kinesin motor domain","interpro_id":"IPR001752","interpro_name":"Kinesin_motor_dom","locations":[{"end":96,"start":75},{"end":211,"start":194},{"end":243,"start":225},{"end":295,"start":274}],"match_end":295,"match_start":75,"name":"KINESINHEAVY"},{"dbname":"FUNFAM","description":"Kinesin-like protein","id":"G3DSA:3.40.850.10:FF:000031","locations":[{"end":349,"start":1}],"match_end":349,"match_start":1},{"dbname":"SUPERFAMILY","id":"SSF52540","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":335,"start":3}],"match_end":335,"match_start":3,"name":"P-loop containing nucleoside triphosphate hydrolases"},{"dbname":"GENE3D","id":"G3DSA:3.40.850.10","interpro_description":"Kinesin motor domain superfamily","interpro_id":"IPR036961","interpro_name":"Kinesin_motor_dom_sf","locations":[{"end":345,"start":1}],"match_end":345,"match_start":1,"name":"Kinesin motor domain"},{"dbname":"PANTHER","id":"PTHR47968","interpro_description":"Kinesin-like protein","interpro_id":"IPR027640","interpro_name":"Kinesin-like_fam","locations":[{"end":345,"start":3}],"match_end":345,"match_start":3,"name":"CENTROMERE PROTEIN E"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":437,"start":395}],"match_end":437,"match_start":395,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":434,"start":422}],"match_end":434,"match_start":422,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":417,"start":402}],"match_end":417,"match_start":402,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3565189,"start_pos":3562911,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":398,"start":368}},{"range":{"end":435,"start":421}},{"range":{"end":565,"start":553}}],"name":"klp3","ortholog_annotations":[{"gene_uniquename":"SJAG_00332","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:6324","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00332","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1834.07","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00332","ortholog_taxonid":4932,"ortholog_uniquename":"YKL079W","reference_uniquename":"PMID:29761456"}],"product":"kinesin-like protein Klp3","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0008017","GO:0005524"],"not-binding":["GO:0016887","GO:0008574"]}},"subset_termids":["GO:0016887","GO:0007163","GO:0003774","GO:0016192","GO:0008017","GO:0005938","GO:0015630","GO:0016853"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000301":null,"GO:0005524":null,"GO:0005871":null,"GO:0005881":null,"GO:0005938":null,"GO:0006886":null,"GO:0006887":null,"GO:0007163":null,"GO:0008017":null,"GO:0008574":null,"GO:0010970":null,"GO:0016887":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00332.1"],"transcripts_by_uniquename":{"SJAG_00332.1":null},"uniprot_identifier":"B6JVC5","uniquename":"SJAG_00332"}


id: SJAG_00333
data:
  {"cv_annotations":{"biological_process":[{"annotations":[92952],"is_not":false,"summary":null,"term":"GO:0071574"},{"annotations":[92953],"is_not":false,"summary":null,"term":"GO:0062200"},{"annotations":[92954],"is_not":false,"summary":null,"term":"GO:2000100"},{"annotations":[92955],"is_not":false,"summary":null,"term":"GO:0070507"}],"cellular_component":[{"annotations":[92944],"is_not":false,"summary":null,"term":"GO:0032153"},{"annotations":[92947],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[92949],"is_not":false,"summary":null,"term":"GO:0071958"},{"annotations":[92950],"is_not":false,"summary":null,"term":"GO:0035839"},{"annotations":[92951],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[77197],"is_not":false,"summary":null,"term":"GO:0043539"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JVC6","EnsemblGenomes-Gn:SJAG_00333","InterPro:IPR013878","GOA:B6JVC6","InterPro:IPR011989","EnsemblGenomes-Tr:EEB05327","InterPro:IPR016024"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"erf1","uniquename":"SJAG_00338"},{"name":"aro1","uniquename":"SJAG_00337"},{"name":"hhf1","uniquename":"SJAG_00336"},{"name":"hht1","uniquename":"SJAG_00335"},{"name":"alg9","uniquename":"SJAG_00334"},{"name":"pmo25","uniquename":"SJAG_00333"},{"name":"klp3","uniquename":"SJAG_00332"},{"name":"mak1","uniquename":"SJAG_00331"},{"name":"sec18","uniquename":"SJAG_00330"},{"name":"whr1","uniquename":"SJAG_00329"},{"name":"cis4","uniquename":"SJAG_00328"}],"genes_by_uniquename":{"HGNC:20290":null,"HGNC:20292":null,"SJAG_00333":null,"SPAC1834.06c":null,"YKL189W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Mo25-like","id":"PF08569","interpro_description":"Mo25-like","interpro_id":"IPR013878","interpro_name":"Mo25","locations":[{"end":329,"start":3}],"match_end":329,"match_start":3,"name":"Mo25"},{"dbname":"SUPERFAMILY","id":"SSF48371","interpro_description":"Armadillo-type fold","interpro_id":"IPR016024","interpro_name":"ARM-type_fold","locations":[{"end":329,"start":11}],"match_end":329,"match_start":11,"name":"ARM repeat"},{"dbname":"GENE3D","id":"G3DSA:1.25.10.10","interpro_description":"Armadillo-like helical","interpro_id":"IPR011989","interpro_name":"ARM-like","locations":[{"end":329,"start":1}],"match_end":329,"match_start":1},{"dbname":"PANTHER","id":"PTHR10182","interpro_description":"Mo25-like","interpro_id":"IPR013878","interpro_name":"Mo25","locations":[{"end":329,"start":1}],"match_end":329,"match_start":1,"name":"CALCIUM-BINDING PROTEIN 39-RELATED"}],"location":{"chromosome_name":"supercont5.1","end_pos":3562446,"start_pos":3561252,"strand":"reverse"},"name":"pmo25","ortholog_annotations":[{"gene_uniquename":"SJAG_00333","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:20290","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00333","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:20292","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00333","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1834.06c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00333","ortholog_taxonid":4932,"ortholog_uniquename":"YKL189W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00333","ortholog_taxonid":4932,"ortholog_uniquename":"YKL189W","reference_uniquename":"PMID:26896847"}],"product":"mo25 family protein Pmo25","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0043539"]}},"subset_termids":["GO:0015630","GO:0007163","GO:0005634","GO:0000226","GO:0098772","GO:0030234","GO:0023052","GO:0005816","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null,"GO:0032153":null,"GO:0035839":null,"GO:0043539":null,"GO:0062200":null,"GO:0070507":null,"GO:0071574":null,"GO:0071958":null,"GO:2000100":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00333.1"],"transcripts_by_uniquename":{"SJAG_00333.1":null},"uniprot_identifier":"B6JVC6","uniquename":"SJAG_00333"}


id: SJAG_00334
data:
  {"cv_annotations":{"biological_process":[{"annotations":[92941],"is_not":false,"summary":null,"term":"GO:0006488"}],"cellular_component":[{"annotations":[92940],"is_not":false,"summary":null,"term":"GO:0098553"}],"molecular_function":[{"annotations":[63464],"is_not":false,"summary":null,"term":"GO:0052926"},{"annotations":[63463],"is_not":false,"summary":null,"term":"GO:0052918"}],"mondo":[{"annotations":[88227],"is_not":false,"summary":null,"term":"MONDO:0012117"},{"annotations":[89065],"is_not":false,"summary":null,"term":"MONDO:0009890"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JVC7","EnsemblGenomes-Gn:SJAG_00334","GOA:B6JVC7","InterPro:IPR005599","InterPro:IPR039484","EnsemblGenomes-Tr:EEB05328"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"vrg4","uniquename":"SJAG_00339"},{"name":"erf1","uniquename":"SJAG_00338"},{"name":"aro1","uniquename":"SJAG_00337"},{"name":"hhf1","uniquename":"SJAG_00336"},{"name":"hht1","uniquename":"SJAG_00335"},{"name":"alg9","uniquename":"SJAG_00334"},{"name":"pmo25","uniquename":"SJAG_00333"},{"name":"klp3","uniquename":"SJAG_00332"},{"name":"mak1","uniquename":"SJAG_00331"},{"name":"sec18","uniquename":"SJAG_00330"},{"name":"whr1","uniquename":"SJAG_00329"}],"genes_by_uniquename":{"HGNC:15672":null,"SJAG_00334":null,"SPAC1834.05":null,"YNL219C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Alg9-like mannosyltransferase family","id":"PF03901","interpro_description":"GPI mannosyltransferase","interpro_id":"IPR005599","interpro_name":"GPI_mannosylTrfase","locations":[{"end":433,"start":15}],"match_end":433,"match_start":15,"name":"Glyco_transf_22"},{"dbname":"PANTHER","id":"PTHR22760","interpro_description":"GPI mannosyltransferase","interpro_id":"IPR005599","interpro_name":"GPI_mannosylTrfase","locations":[{"end":531,"start":17}],"match_end":531,"match_start":17,"name":"GLYCOSYLTRANSFERASE"}],"location":{"chromosome_name":"supercont5.1","end_pos":3560524,"start_pos":3558809,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":123,"start":111}},{"range":{"end":183,"start":170}}],"name":"alg9","ortholog_annotations":[{"gene_uniquename":"SJAG_00334","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:15672","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00334","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1834.05","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00334","ortholog_taxonid":4932,"ortholog_uniquename":"YNL219C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00334","ortholog_taxonid":4932,"ortholog_uniquename":"YNL219C","reference_uniquename":"PMID:26896847"}],"product":"dol-P-Man:Man(6)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase/ dol-P-Man:Man(8)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase Alg9","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0052918","GO:0052926"]}},"subset_termids":["GO:0005783","MONDO:0005066","GO:0016757","MONDO:0024322","GO:0005789"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0006488":null,"GO:0052918":null,"GO:0052926":null,"GO:0098553":null,"MONDO:0009890":null,"MONDO:0012117":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":33,"start":11}},{"assigned_by":"TMHMM","range":{"end":87,"start":65}},{"assigned_by":"TMHMM","range":{"end":116,"start":94}},{"assigned_by":"TMHMM","range":{"end":158,"start":136}},{"assigned_by":"TMHMM","range":{"end":193,"start":171}},{"assigned_by":"TMHMM","range":{"end":239,"start":217}},{"assigned_by":"TMHMM","range":{"end":300,"start":278}},{"assigned_by":"TMHMM","range":{"end":354,"start":332}},{"assigned_by":"TMHMM","range":{"end":394,"start":375}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00334.1"],"transcripts_by_uniquename":{"SJAG_00334.1":null},"uniprot_identifier":"B6JVC7","uniquename":"SJAG_00334"}


id: SJAG_00335
data:
  {"cv_annotations":{"biological_process":[{"annotations":[114469],"is_not":false,"summary":null,"term":"GO:0006974"},{"annotations":[114472],"is_not":false,"summary":null,"term":"GO:0033696"},{"annotations":[114478],"is_not":false,"summary":null,"term":"GO:1990758"},{"annotations":[114481],"is_not":false,"summary":null,"term":"GO:0031508"}],"cellular_component":[{"annotations":[114451],"is_not":false,"summary":null,"term":"GO:0031934"},{"annotations":[114454],"is_not":false,"summary":null,"term":"GO:0140602"},{"annotations":[114457],"is_not":false,"summary":null,"term":"GO:0000786"},{"annotations":[114463],"is_not":false,"summary":null,"term":"GO:0005721"},{"annotations":[114466],"is_not":false,"summary":null,"term":"GO:0140720"}],"molecular_function":[{"annotations":[114484],"is_not":false,"summary":null,"term":"GO:0140463"},{"annotations":[114487],"is_not":false,"summary":null,"term":"GO:0003677"},{"annotations":[114490],"is_not":false,"summary":null,"term":"GO:0030527"}],"mondo":[{"annotations":[88907],"is_not":false,"summary":null,"term":"MONDO:0030606"},{"annotations":[88910],"is_not":false,"summary":null,"term":"MONDO:0030607"}]},"dbxrefs":["InterPro:IPR007125","UniProtKB/TrEMBL:B6JV95","InterPro:IPR009072","GOA:B6JV95","EnsemblGenomes-Gn:SJAG_00335","EnsemblGenomes-Tr:EEB05329","InterPro:IPR000164"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":48,"start":1}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","flags":["is_histone"],"gene_neighbourhood":[{"name":"ecm33","uniquename":"SJAG_00340"},{"name":"vrg4","uniquename":"SJAG_00339"},{"name":"erf1","uniquename":"SJAG_00338"},{"name":"aro1","uniquename":"SJAG_00337"},{"name":"hhf1","uniquename":"SJAG_00336"},{"name":"hht1","uniquename":"SJAG_00335"},{"name":"alg9","uniquename":"SJAG_00334"},{"name":"pmo25","uniquename":"SJAG_00333"},{"name":"klp3","uniquename":"SJAG_00332"},{"name":"mak1","uniquename":"SJAG_00331"},{"name":"sec18","uniquename":"SJAG_00330"}],"genes_by_uniquename":{"HGNC:20503":null,"HGNC:20505":null,"HGNC:25311":null,"HGNC:32060":null,"HGNC:4764":null,"HGNC:4765":null,"HGNC:4766":null,"HGNC:4768":null,"HGNC:4769":null,"HGNC:4771":null,"HGNC:4772":null,"HGNC:4773":null,"HGNC:4774":null,"HGNC:4775":null,"HGNC:4778":null,"SJAG_00335":null,"SPBC1105.11c":null,"SPBC8D2.04":null,"YBR010W":null,"YNL031C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Core histone H2A/H2B/H3/H4","id":"PF00125","interpro_description":"Histone H2A/H2B/H3","interpro_id":"IPR007125","interpro_name":"Histone_H2A/H2B/H3","locations":[{"end":133,"start":7}],"match_end":133,"match_start":7,"name":"Histone"},{"dbname":"CDD","description":"HFD_H3","id":"cd22911","locations":[{"end":134,"start":41}],"match_end":134,"match_start":41,"name":"HFD_H3"},{"dbname":"PROSITE_PATTERNS","description":"Histone H3 signature 1.","id":"PS00322","interpro_description":"Histone H3/CENP-A","interpro_id":"IPR000164","interpro_name":"Histone_H3/CENP-A","locations":[{"end":21,"start":15}],"match_end":21,"match_start":15,"name":"HISTONE_H3_1"},{"dbname":"PROSITE_PATTERNS","description":"Histone H3 signature 2.","id":"PS00959","interpro_description":"Histone H3/CENP-A","interpro_id":"IPR000164","interpro_name":"Histone_H3/CENP-A","locations":[{"end":76,"start":68}],"match_end":76,"match_start":68,"name":"HISTONE_H3_2"},{"dbname":"SMART","id":"SM00428","interpro_description":"Histone H3/CENP-A","interpro_id":"IPR000164","interpro_name":"Histone_H3/CENP-A","locations":[{"end":137,"start":35}],"match_end":137,"match_start":35,"name":"h35"},{"dbname":"PRINTS","description":"Histone H3 signature","id":"PR00622","interpro_description":"Histone H3/CENP-A","interpro_id":"IPR000164","interpro_name":"Histone_H3/CENP-A","locations":[{"end":31,"start":3},{"end":56,"start":35},{"end":76,"start":59},{"end":136,"start":81}],"match_end":136,"match_start":3,"name":"HISTONEH3"},{"dbname":"FUNFAM","description":"Histone H3","id":"G3DSA:1.10.20.10:FF:000010","locations":[{"end":137,"start":2}],"match_end":137,"match_start":2},{"dbname":"SUPERFAMILY","id":"SSF47113","interpro_description":"Histone-fold","interpro_id":"IPR009072","interpro_name":"Histone-fold","locations":[{"end":134,"start":2}],"match_end":134,"match_start":2,"name":"Histone-fold"},{"dbname":"GENE3D","id":"G3DSA:1.10.20.10","interpro_description":"Histone-fold","interpro_id":"IPR009072","interpro_name":"Histone-fold","locations":[{"end":137,"start":2}],"match_end":137,"match_start":2,"name":"Histone, subunit A"},{"dbname":"PANTHER","id":"PTHR11426","interpro_description":"Histone H3/CENP-A","interpro_id":"IPR000164","interpro_name":"Histone_H3/CENP-A","locations":[{"end":136,"start":1}],"match_end":136,"match_start":1,"name":"HISTONE H3"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":48,"start":1}],"match_end":48,"match_start":1,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3557743,"start_pos":3557330,"strand":"forward"},"name":"hht1","ortholog_annotations":[{"gene_uniquename":"SJAG_00335","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:20503","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00335","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:20503","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00335","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:20505","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00335","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:20505","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00335","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:25311","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00335","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:25311","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00335","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:32060","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00335","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:32060","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00335","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4764","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00335","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4764","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00335","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4765","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00335","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4765","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00335","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4766","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00335","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4766","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00335","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4768","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00335","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4768","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00335","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4769","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00335","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4769","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00335","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4771","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00335","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4771","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00335","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4772","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00335","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4772","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00335","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4773","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00335","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4773","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00335","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4774","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00335","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4774","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00335","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4775","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00335","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4775","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00335","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4778","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00335","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4778","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00335","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1105.11c","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_00335","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC8D2.04","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_00335","ortholog_taxonid":4932,"ortholog_uniquename":"YBR010W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00335","ortholog_taxonid":4932,"ortholog_uniquename":"YBR010W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00335","ortholog_taxonid":4932,"ortholog_uniquename":"YBR010W","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_00335","ortholog_taxonid":4932,"ortholog_uniquename":"YNL031C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00335","ortholog_taxonid":4932,"ortholog_uniquename":"YNL031C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00335","ortholog_taxonid":4932,"ortholog_uniquename":"YNL031C","reference_uniquename":"PMID:26896847"}],"product":"histone H3 h3.1","references_by_uniquename":{"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003677"],"not-binding":["GO:0030527","GO:0140463"]}},"subset_termids":["GO:0000070","GO:0005694","GO:0006325","GO:0005198","GO:0005634","GO:0060090"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000786":null,"GO:0003677":null,"GO:0005721":null,"GO:0006974":null,"GO:0030527":null,"GO:0031508":null,"GO:0031934":null,"GO:0033696":null,"GO:0140463":null,"GO:0140602":null,"GO:0140720":null,"GO:1990758":null,"MONDO:0030606":null,"MONDO:0030607":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00335.1"],"transcripts_by_uniquename":{"SJAG_00335.1":null},"uniprot_identifier":"B6JV95","uniquename":"SJAG_00335"}


id: SJAG_00336
data:
  {"cv_annotations":{"biological_process":[{"annotations":[92927],"is_not":false,"summary":null,"term":"GO:0006334"}],"cellular_component":[{"annotations":[114430],"is_not":false,"summary":null,"term":"GO:0000786"},{"annotations":[114433],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[114439],"is_not":false,"summary":null,"term":"GO:0140463"},{"annotations":[114442],"is_not":false,"summary":null,"term":"GO:0003677"},{"annotations":[114445],"is_not":false,"summary":null,"term":"GO:0030527"}],"mondo":[{"annotations":[88933],"is_not":false,"summary":null,"term":"MONDO:0030729"},{"annotations":[88928],"is_not":false,"summary":null,"term":"MONDO:0030730"},{"annotations":[88618],"is_not":false,"summary":null,"term":"MONDO:0030993"},{"annotations":[88621],"is_not":false,"summary":null,"term":"MONDO:0031000"}]},"dbxrefs":["InterPro:IPR001951","InterPro:IPR035425","EnsemblGenomes-Gn:SJAG_00336","EnsemblGenomes-Tr:EEB05330","GOA:B6JV96","InterPro:IPR009072","InterPro:IPR019809","PDB:4XYI","UniProtKB/TrEMBL:B6JV96"],"deletion_viability":"unknown","feature_publications":[{"reference_uniquename":"PMID:26343758","source":"canto"}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","flags":["is_histone"],"gene_neighbourhood":[{"name":"rbx1","uniquename":"SJAG_00341"},{"name":"ecm33","uniquename":"SJAG_00340"},{"name":"vrg4","uniquename":"SJAG_00339"},{"name":"erf1","uniquename":"SJAG_00338"},{"name":"aro1","uniquename":"SJAG_00337"},{"name":"hhf1","uniquename":"SJAG_00336"},{"name":"hht1","uniquename":"SJAG_00335"},{"name":"alg9","uniquename":"SJAG_00334"},{"name":"pmo25","uniquename":"SJAG_00333"},{"name":"klp3","uniquename":"SJAG_00332"},{"name":"mak1","uniquename":"SJAG_00331"}],"genes_by_uniquename":{"HGNC:20510":null,"HGNC:4781":null,"HGNC:4782":null,"HGNC:4783":null,"HGNC:4784":null,"HGNC:4785":null,"HGNC:4787":null,"HGNC:4788":null,"HGNC:4789":null,"HGNC:4790":null,"HGNC:4791":null,"HGNC:4792":null,"HGNC:4793":null,"HGNC:4794":null,"SJAG_00336":null,"SPAC1834.03c":null,"SPBC1105.12":null,"SPBC8D2.03c":null,"YBR009C":null,"YNL030W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Centromere kinetochore component CENP-T histone fold","id":"PF15511","interpro_description":"CENP-T/Histone H4, histone fold","interpro_id":"IPR035425","interpro_name":"CENP-T/H4_C","locations":[{"end":96,"start":33}],"match_end":96,"match_start":33,"name":"CENP-T_C"},{"dbname":"CDD","description":"HFD_H4","id":"cd22912","interpro_description":"Histone H4","interpro_id":"IPR001951","interpro_name":"Histone_H4","locations":[{"end":100,"start":22}],"match_end":100,"match_start":22,"name":"HFD_H4"},{"dbname":"PROSITE_PATTERNS","description":"Histone H4 signature.","id":"PS00047","interpro_description":"Histone H4, conserved site","interpro_id":"IPR019809","interpro_name":"Histone_H4_CS","locations":[{"end":19,"start":15}],"match_end":19,"match_start":15,"name":"HISTONE_H4"},{"dbname":"SMART","id":"SM00417","interpro_description":"Histone H4","interpro_id":"IPR001951","interpro_name":"Histone_H4","locations":[{"end":90,"start":16}],"match_end":90,"match_start":16,"name":"h44"},{"dbname":"PRINTS","description":"Histone H4 signature","id":"PR00623","interpro_description":"Histone H4","interpro_id":"IPR001951","interpro_name":"Histone_H4","locations":[{"end":16,"start":5},{"end":60,"start":20},{"end":100,"start":62}],"match_end":100,"match_start":5,"name":"HISTONEH4"},{"dbname":"FUNFAM","description":"Histone H4","id":"G3DSA:1.10.20.10:FF:000007","locations":[{"end":103,"start":2}],"match_end":103,"match_start":2},{"dbname":"SUPERFAMILY","id":"SSF47113","interpro_description":"Histone-fold","interpro_id":"IPR009072","interpro_name":"Histone-fold","locations":[{"end":102,"start":3}],"match_end":102,"match_start":3,"name":"Histone-fold"},{"dbname":"GENE3D","id":"G3DSA:1.10.20.10","interpro_description":"Histone-fold","interpro_id":"IPR009072","interpro_name":"Histone-fold","locations":[{"end":103,"start":2}],"match_end":103,"match_start":2,"name":"Histone, subunit A"},{"dbname":"PANTHER","id":"PTHR10484","interpro_description":"Histone H4","interpro_id":"IPR001951","interpro_name":"Histone_H4","locations":[{"end":102,"start":1}],"match_end":102,"match_start":1,"name":"HISTONE H4"}],"location":{"chromosome_name":"supercont5.1","end_pos":3556920,"start_pos":3556609,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":20,"start":2}}],"name":"hhf1","ortholog_annotations":[{"gene_uniquename":"SJAG_00336","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:20510","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00336","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:20510","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00336","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:20510","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00336","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4781","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00336","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4781","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00336","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4781","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00336","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4782","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00336","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4782","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00336","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4782","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00336","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4783","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00336","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4783","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00336","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4783","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00336","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4784","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00336","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4784","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00336","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4784","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00336","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4785","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00336","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4785","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00336","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4785","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00336","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4787","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00336","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4787","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00336","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4787","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00336","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4788","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00336","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4788","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00336","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4788","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00336","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4789","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00336","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4789","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00336","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4789","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00336","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4790","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00336","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4790","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00336","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4790","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00336","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4791","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00336","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4791","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00336","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4791","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00336","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4792","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00336","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4792","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00336","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4792","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00336","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4793","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00336","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4793","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00336","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4793","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00336","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4794","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00336","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4794","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00336","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4794","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00336","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1834.03c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00336","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1105.12","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_00336","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC8D2.03c","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_00336","ortholog_taxonid":4932,"ortholog_uniquename":"YBR009C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00336","ortholog_taxonid":4932,"ortholog_uniquename":"YBR009C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00336","ortholog_taxonid":4932,"ortholog_uniquename":"YBR009C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00336","ortholog_taxonid":4932,"ortholog_uniquename":"YBR009C","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_00336","ortholog_taxonid":4932,"ortholog_uniquename":"YNL030W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00336","ortholog_taxonid":4932,"ortholog_uniquename":"YNL030W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00336","ortholog_taxonid":4932,"ortholog_uniquename":"YNL030W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00336","ortholog_taxonid":4932,"ortholog_uniquename":"YNL030W","reference_uniquename":"PMID:26896847"}],"product":"histone H4 h4.1","references_by_uniquename":{"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26343758":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003677"],"not-binding":["GO:0030527","GO:0140463"]}},"subset_termids":["GO:0065003","GO:0005634","GO:0005198","GO:0005694","GO:0060090","GO:0006325"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000786":null,"GO:0003677":null,"GO:0005634":null,"GO:0006334":null,"GO:0030527":null,"GO:0140463":null,"MONDO:0030729":null,"MONDO:0030730":null,"MONDO:0030993":null,"MONDO:0031000":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00336.1"],"transcripts_by_uniquename":{"SJAG_00336.1":null},"uniprot_identifier":"B6JV96","uniquename":"SJAG_00336"}


id: SJAG_00337
data:
  {"active_sites":[{"assigned_by":"UniProtKB","range":{"end":260,"start":260}},{"assigned_by":"UniProtKB","range":{"end":275,"start":275}},{"assigned_by":"UniProtKB","range":{"end":825,"start":825}},{"assigned_by":"UniProtKB","range":{"end":1182,"start":1182}},{"assigned_by":"UniProtKB","range":{"end":1211,"start":1211}}],"binding_sites":[{"assigned_by":"UniProtKB","ligand":"NAD(+)","range":{"end":48,"start":46}},{"assigned_by":"UniProtKB","ligand":"NAD(+)","range":{"end":86,"start":83}},{"assigned_by":"UniProtKB","ligand":"NAD(+)","range":{"end":116,"start":114}},{"assigned_by":"UniProtKB","ligand":"NAD(+)","range":{"end":119,"start":119}},{"assigned_by":"UniProtKB","ligand":"7-phospho-2-dehydro-3-deoxy-D-arabino-heptonate","range":{"end":130,"start":130}},{"assigned_by":"UniProtKB","ligand":"NAD(+)","range":{"end":140,"start":139}},{"assigned_by":"UniProtKB","ligand":"7-phospho-2-dehydro-3-deoxy-D-arabino-heptonate","range":{"end":146,"start":146}},{"assigned_by":"UniProtKB","ligand":"7-phospho-2-dehydro-3-deoxy-D-arabino-heptonate","range":{"end":152,"start":152}},{"assigned_by":"UniProtKB","ligand":"NAD(+)","range":{"end":161,"start":161}},{"assigned_by":"UniProtKB","ligand":"7-phospho-2-dehydro-3-deoxy-D-arabino-heptonate","range":{"end":162,"start":162}},{"assigned_by":"UniProtKB","ligand":"NAD(+)","range":{"end":182,"start":179}},{"assigned_by":"UniProtKB","ligand":"NAD(+)","range":{"end":190,"start":190}},{"assigned_by":"UniProtKB","ligand":"7-phospho-2-dehydro-3-deoxy-D-arabino-heptonate","range":{"end":197,"start":194}},{"assigned_by":"UniProtKB","ligand":"Zn(2+)","range":{"end":194,"start":194}},{"assigned_by":"UniProtKB","ligand":"7-phospho-2-dehydro-3-deoxy-D-arabino-heptonate","range":{"end":250,"start":250}},{"assigned_by":"UniProtKB","ligand":"7-phospho-2-dehydro-3-deoxy-D-arabino-heptonate","range":{"end":268,"start":264}},{"assigned_by":"UniProtKB","ligand":"7-phospho-2-dehydro-3-deoxy-D-arabino-heptonate","range":{"end":271,"start":271}},{"assigned_by":"UniProtKB","ligand":"Zn(2+)","range":{"end":271,"start":271}},{"assigned_by":"UniProtKB","ligand":"7-phospho-2-dehydro-3-deoxy-D-arabino-heptonate","range":{"end":287,"start":287}},{"assigned_by":"UniProtKB","ligand":"Zn(2+)","range":{"end":287,"start":287}},{"assigned_by":"UniProtKB","ligand":"7-phospho-2-dehydro-3-deoxy-D-arabino-heptonate","range":{"end":356,"start":356}},{"assigned_by":"UniProtKB","ligand":"ATP","range":{"end":877,"start":870}}],"chains":[{"assigned_by":"UniProtKB","range":{"end":1584,"start":1}}],"cv_annotations":{"biological_process":[{"annotations":[60415],"is_not":false,"summary":null,"term":"GO:0009073"},{"annotations":[92913],"is_not":false,"summary":null,"term":"GO:0009423"}],"cellular_component":[{"annotations":[92911],"is_not":false,"summary":null,"term":"GO:0005829"}],"molecular_function":[{"annotations":[60420],"is_not":false,"summary":null,"term":"GO:0003855"},{"annotations":[60421],"is_not":false,"summary":null,"term":"GO:0003856"},{"annotations":[74063],"is_not":false,"summary":null,"term":"GO:0003866"},{"annotations":[60428],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[60431],"is_not":false,"summary":null,"term":"GO:0046872"},{"annotations":[60423],"is_not":false,"summary":null,"term":"GO:0004764"},{"annotations":[60424],"is_not":false,"summary":null,"term":"GO:0004765"}]},"dbxrefs":["InterPro:IPR001986","InterPro:IPR036968","UniProtKB/Swiss-Prot:B6JVD0","InterPro:IPR036291","InterPro:IPR016037","GOA:B6JVD0","EnsemblGenomes-Gn:SJAG_00337","InterPro:IPR013785","InterPro:IPR000623","InterPro:IPR006264","InterPro:IPR023193","InterPro:IPR006151","InterPro:IPR008289","InterPro:IPR022893","InterPro:IPR027417","InterPro:IPR041121","InterPro:IPR001381","InterPro:IPR031322","InterPro:IPR013792","InterPro:IPR010110","InterPro:IPR013708","InterPro:IPR030960","EnsemblGenomes-Tr:EEB05331"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"srb10","uniquename":"SJAG_00342"},{"name":"rbx1","uniquename":"SJAG_00341"},{"name":"ecm33","uniquename":"SJAG_00340"},{"name":"vrg4","uniquename":"SJAG_00339"},{"name":"erf1","uniquename":"SJAG_00338"},{"name":"aro1","uniquename":"SJAG_00337"},{"name":"hhf1","uniquename":"SJAG_00336"},{"name":"hht1","uniquename":"SJAG_00335"},{"name":"alg9","uniquename":"SJAG_00334"},{"name":"pmo25","uniquename":"SJAG_00333"},{"name":"klp3","uniquename":"SJAG_00332"}],"genes_by_uniquename":{"SJAG_00337":null,"SPAC1834.02":null,"YDR127W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"3-dehydroquinate synthase N-terminal","id":"PF01761","interpro_description":"3-dehydroquinate synthase, N-terminal domain","interpro_id":"IPR030960","interpro_name":"DHQS/DOIS_N","locations":[{"end":189,"start":78}],"match_end":189,"match_start":78,"name":"DHQ_synthase"},{"dbname":"PFAM","description":"Type I 3-dehydroquinase","id":"PF01487","interpro_description":"3-dehydroquinate dehydratase type I","interpro_id":"IPR001381","interpro_name":"DHquinase_I","locations":[{"end":1285,"start":1056}],"match_end":1285,"match_start":1056,"name":"DHquinase_I"},{"dbname":"PFAM","description":"Shikimate 5'-dehydrogenase C-terminal domain","id":"PF18317","interpro_description":"SDH, C-terminal","interpro_id":"IPR041121","interpro_name":"SDH_C","locations":[{"end":1570,"start":1546}],"match_end":1570,"match_start":1546,"name":"SDH_C"},{"dbname":"PFAM","description":"Shikimate kinase","id":"PF01202","interpro_description":"Shikimate kinase/gluconokinase","interpro_id":"IPR031322","interpro_name":"Shikimate/glucono_kinase","locations":[{"end":1017,"start":872}],"match_end":1017,"match_start":872,"name":"SKI"},{"dbname":"PFAM","description":"3-dehydroquinate synthase C-terminal","id":"PF24621","interpro_description":"3-dehydroquinate synthase, C-terminal domain","interpro_id":"IPR056179","interpro_name":"DHQS_C","locations":[{"end":358,"start":191}],"match_end":358,"match_start":191,"name":"DHQS_C"},{"dbname":"PFAM","description":"Shikimate / quinate 5-dehydrogenase","id":"PF01488","interpro_description":"Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase","interpro_id":"IPR006151","interpro_name":"Shikm_DH/Glu-tRNA_Rdtase","locations":[{"end":1468,"start":1408}],"match_end":1468,"match_start":1408,"name":"Shikimate_DH"},{"dbname":"PFAM","description":"EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)","id":"PF00275","interpro_description":"Enolpyruvate transferase domain","interpro_id":"IPR001986","interpro_name":"Enolpyruvate_Tfrase_dom","locations":[{"end":837,"start":408}],"match_end":837,"match_start":408,"name":"EPSP_synthase"},{"dbname":"PFAM","description":"Shikimate dehydrogenase substrate binding domain","id":"PF08501","interpro_description":"Shikimate dehydrogenase substrate binding, N-terminal","interpro_id":"IPR013708","interpro_name":"Shikimate_DH-bd_N","locations":[{"end":1378,"start":1298}],"match_end":1378,"match_start":1298,"name":"Shikimate_dh_N"},{"dbname":"CDD","description":"DHQase_I","id":"cd00502","interpro_description":"3-dehydroquinate dehydratase type I","interpro_id":"IPR001381","interpro_name":"DHquinase_I","locations":[{"end":1287,"start":1054}],"match_end":1287,"match_start":1054,"name":"DHQase_I"},{"dbname":"CDD","description":"SK","id":"cd00464","interpro_description":"Shikimate kinase/Threonine synthase-like 1","interpro_id":"IPR000623","interpro_name":"Shikimate_kinase/TSH1","locations":[{"end":1005,"start":865}],"match_end":1005,"match_start":865,"name":"SK"},{"dbname":"CDD","description":"NAD_bind_Shikimate_DH","id":"cd01065","locations":[{"end":1563,"start":1394}],"match_end":1563,"match_start":1394,"name":"NAD_bind_Shikimate_DH"},{"dbname":"CDD","description":"EPSP_synthase","id":"cd01556","interpro_description":"3-phosphoshikimate 1-carboxyvinyltransferase","interpro_id":"IPR006264","interpro_name":"EPSP_synthase","locations":[{"end":838,"start":409}],"match_end":838,"match_start":409,"name":"EPSP_synthase"},{"dbname":"CDD","description":"DHQS","id":"cd08195","locations":[{"end":391,"start":18}],"match_end":391,"match_start":18,"name":"DHQS"},{"dbname":"PROSITE_PATTERNS","description":"EPSP synthase signature 2.","id":"PS00885","interpro_description":"3-phosphoshikimate 1-carboxyvinyltransferase, conserved site","interpro_id":"IPR023193","interpro_name":"EPSP_synthase_CS","locations":[{"end":768,"start":750}],"match_end":768,"match_start":750,"name":"EPSP_SYNTHASE_2"},{"dbname":"PRINTS","description":"Shikimate kinase family signature","id":"PR01100","locations":[{"end":881,"start":866},{"end":903,"start":890},{"end":926,"start":918},{"end":947,"start":938},{"end":980,"start":963}],"match_end":980,"match_start":866,"name":"SHIKIMTKNASE"},{"dbname":"FUNFAM","description":"Pentafunctional AROM polypeptide","id":"G3DSA:3.40.50.300:FF:001256","locations":[{"end":1033,"start":853}],"match_end":1033,"match_start":853},{"dbname":"FUNFAM","description":"Pentafunctional AROM polypeptide","id":"G3DSA:3.40.50.10860:FF:000015","locations":[{"end":1406,"start":1297}],"match_end":1406,"match_start":1297},{"dbname":"FUNFAM","description":"Pentafunctional AROM polypeptide","id":"G3DSA:3.20.20.70:FF:000135","locations":[{"end":1294,"start":1036}],"match_end":1294,"match_start":1036},{"dbname":"FUNFAM","description":"Pentafunctional AROM polypeptide","id":"G3DSA:3.40.50.1970:FF:000007","locations":[{"end":182,"start":5}],"match_end":182,"match_start":5},{"dbname":"FUNFAM","description":"Pentafunctional AROM polypeptide","id":"G3DSA:3.65.10.10:FF:000008","locations":[{"end":836,"start":637}],"match_end":836,"match_start":637},{"dbname":"FUNFAM","description":"Pentafunctional AROM polypeptide","id":"G3DSA:3.65.10.10:FF:000007","locations":[{"end":636,"start":415}],"match_end":636,"match_start":415},{"dbname":"FUNFAM","description":"Pentafunctional AROM polypeptide","id":"G3DSA:1.20.1090.10:FF:000007","locations":[{"end":392,"start":183}],"match_end":392,"match_start":183},{"dbname":"SUPERFAMILY","id":"SSF55205","interpro_description":"RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta","interpro_id":"IPR013792","interpro_name":"RNA3'P_cycl/enolpyr_Trfase_a/b","locations":[{"end":839,"start":406}],"match_end":839,"match_start":406,"name":"EPT/RTPC-like"},{"dbname":"SUPERFAMILY","id":"SSF51735","interpro_description":"NAD(P)-binding domain superfamily","interpro_id":"IPR036291","interpro_name":"NAD(P)-bd_dom_sf","locations":[{"end":1574,"start":1395}],"match_end":1574,"match_start":1395,"name":"NAD(P)-binding Rossmann-fold domains"},{"dbname":"SUPERFAMILY","id":"SSF52540","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":1008,"start":866}],"match_end":1008,"match_start":866,"name":"P-loop containing nucleoside triphosphate hydrolases"},{"dbname":"SUPERFAMILY","id":"SSF51569","locations":[{"end":1289,"start":1049}],"match_end":1289,"match_start":1049,"name":"Aldolase"},{"dbname":"SUPERFAMILY","id":"SSF53223","interpro_description":"Aminoacid dehydrogenase-like, N-terminal domain superfamily","interpro_id":"IPR046346","interpro_name":"Aminoacid_DH-like_N_sf","locations":[{"end":1394,"start":1287}],"match_end":1394,"match_start":1287,"name":"Aminoacid dehydrogenase-like, N-terminal domain"},{"dbname":"SUPERFAMILY","id":"SSF56796","locations":[{"end":387,"start":16}],"match_end":387,"match_start":16,"name":"Dehydroquinate synthase-like"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.1970","locations":[{"end":182,"start":2}],"match_end":182,"match_start":2},{"dbname":"GENE3D","id":"G3DSA:3.40.50.720","locations":[{"end":1545,"start":1394}],"match_end":1545,"match_start":1394},{"dbname":"GENE3D","id":"G3DSA:3.65.10.10","interpro_description":"Enolpyruvate transferase domain superfamily","interpro_id":"IPR036968","interpro_name":"Enolpyruvate_Tfrase_sf","locations":[{"end":834,"start":409}],"match_end":834,"match_start":409,"name":"Enolpyruvate transferase domain"},{"dbname":"GENE3D","id":"G3DSA:1.20.1090.10","locations":[{"end":392,"start":183}],"match_end":392,"match_start":183},{"dbname":"GENE3D","id":"G3DSA:3.40.50.10860","locations":[{"end":1393,"start":1297},{"end":1568,"start":1546}],"match_end":1568,"match_start":1297,"name":"Leucine Dehydrogenase, chain A, domain 1"},{"dbname":"GENE3D","id":"G3DSA:3.20.20.70","interpro_description":"Aldolase-type TIM barrel","interpro_id":"IPR013785","interpro_name":"Aldolase_TIM","locations":[{"end":1294,"start":1036}],"match_end":1294,"match_start":1036,"name":"Aldolase class I"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.300","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":1035,"start":850}],"match_end":1035,"match_start":850},{"dbname":"PANTHER","id":"PTHR21090","locations":[{"end":983,"start":56}],"match_end":983,"match_start":56,"name":"AROM/DEHYDROQUINATE SYNTHASE"},{"dbname":"PIRSF","id":"PIRSF000514","interpro_description":"Pentafunctional AroM protein","interpro_id":"IPR008289","interpro_name":"Pentafunct_AroM","locations":[{"end":1578,"start":4}],"match_end":1578,"match_start":4,"name":"Pentafunct_AroM"},{"dbname":"HAMAP","description":"3-phosphoshikimate 1-carboxyvinyltransferase [aroA].","id":"MF_00210","interpro_description":"3-phosphoshikimate 1-carboxyvinyltransferase","interpro_id":"IPR006264","interpro_name":"EPSP_synthase","locations":[{"end":843,"start":403}],"match_end":843,"match_start":403,"name":"EPSP_synth"},{"dbname":"HAMAP","description":"Shikimate kinase [aroK].","id":"MF_00109","interpro_description":"Shikimate kinase/Threonine synthase-like 1","interpro_id":"IPR000623","interpro_name":"Shikimate_kinase/TSH1","locations":[{"end":1032,"start":863}],"match_end":1032,"match_start":863,"name":"Shikimate_kinase"},{"dbname":"HAMAP","description":"Pentafunctional AROM polypeptide [aroM].","id":"MF_03143","interpro_description":"Pentafunctional AroM protein","interpro_id":"IPR008289","interpro_name":"Pentafunct_AroM","locations":[{"end":1574,"start":5}],"match_end":1574,"match_start":5,"name":"Pentafunct_AroM"},{"dbname":"HAMAP","description":"Shikimate dehydrogenase (NADP(+)) [aroE].","id":"MF_00222","interpro_description":"Shikimate dehydrogenase family","interpro_id":"IPR022893","interpro_name":"Shikimate_DH_fam","locations":[{"end":1577,"start":1293}],"match_end":1577,"match_start":1293,"name":"Shikimate_DH_AroE"},{"dbname":"NCBIFAM","description":"3-dehydroquinate synthase","id":"TIGR01357","interpro_description":"3-dehydroquinate synthase AroB","interpro_id":"IPR016037","interpro_name":"DHQ_synth_AroB","locations":[{"end":388,"start":20}],"match_end":388,"match_start":20,"name":"aroB"},{"dbname":"NCBIFAM","description":"type I 3-dehydroquinate dehydratase","id":"TIGR01093","interpro_description":"3-dehydroquinate dehydratase type I","interpro_id":"IPR001381","interpro_name":"DHquinase_I","locations":[{"end":1282,"start":1055}],"match_end":1282,"match_start":1055,"name":"aroD"},{"dbname":"NCBIFAM","description":"3-phosphoshikimate 1-carboxyvinyltransferase","id":"TIGR01356","interpro_description":"3-phosphoshikimate 1-carboxyvinyltransferase","interpro_id":"IPR006264","interpro_name":"EPSP_synthase","locations":[{"end":840,"start":409}],"match_end":840,"match_start":409,"name":"aroA"},{"dbname":"NCBIFAM","description":"shikimate dehydrogenase","id":"TIGR01809","interpro_description":"Shikimate dehydrogenase, AroM-type","interpro_id":"IPR010110","interpro_name":"Shikimate_DH_AroM-type","locations":[{"end":1572,"start":1289}],"match_end":1572,"match_start":1289,"name":"Shik-DH-AROM"}],"location":{"chromosome_name":"supercont5.1","end_pos":3556235,"start_pos":3551481,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":730,"start":715}},{"range":{"end":1416,"start":1405}}],"name":"aro1","ortholog_annotations":[{"gene_uniquename":"SJAG_00337","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1834.02","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00337","ortholog_taxonid":4932,"ortholog_uniquename":"YDR127W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00337","ortholog_taxonid":4932,"ortholog_uniquename":"YDR127W","reference_uniquename":"PMID:26896847"}],"product":"pentafunctional aromatic polypeptide Aro1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005524","GO:0046872"],"not-binding":["GO:0003855","GO:0004764","GO:0003856","GO:0003866","GO:0004765"]}},"subset_termids":["GO:0016829","GO:0016765","GO:0016301","GO:0016491","GO:0006520","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003855":null,"GO:0003856":null,"GO:0003866":null,"GO:0004764":null,"GO:0004765":null,"GO:0005524":null,"GO:0005829":null,"GO:0009073":null,"GO:0009423":null,"GO:0046872":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":129,"start":107}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00337.1"],"transcripts_by_uniquename":{"SJAG_00337.1":null},"uniprot_identifier":"B6JVD0","uniquename":"SJAG_00337"}


id: SJAG_00338
data:
  {"cv_annotations":{"biological_process":[{"annotations":[75585],"is_not":false,"summary":null,"term":"GO:0002184"}],"cellular_component":[{"annotations":[75586],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[75588],"is_not":false,"summary":null,"term":"GO:0018444"}],"molecular_function":[{"annotations":[92907],"is_not":false,"summary":null,"term":"GO:0030695"},{"annotations":[75589],"is_not":false,"summary":null,"term":"GO:1990825"},{"annotations":[75587],"is_not":false,"summary":null,"term":"GO:0016149"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB05332","InterPro:IPR004403","UniProtKB/TrEMBL:B6JVD1","InterPro:IPR005140","InterPro:IPR005141","InterPro:IPR005142","InterPro:IPR024049","EnsemblGenomes-Gn:SJAG_00338","InterPro:IPR029064","InterPro:IPR042226","GOA:B6JVD1"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"not11","uniquename":"SJAG_00343"},{"name":"srb10","uniquename":"SJAG_00342"},{"name":"rbx1","uniquename":"SJAG_00341"},{"name":"ecm33","uniquename":"SJAG_00340"},{"name":"vrg4","uniquename":"SJAG_00339"},{"name":"erf1","uniquename":"SJAG_00338"},{"name":"aro1","uniquename":"SJAG_00337"},{"name":"hhf1","uniquename":"SJAG_00336"},{"name":"hht1","uniquename":"SJAG_00335"},{"name":"alg9","uniquename":"SJAG_00334"},{"name":"pmo25","uniquename":"SJAG_00333"}],"genes_by_uniquename":{"HGNC:3477":null,"SJAG_00338":null,"SPAC1834.01":null,"YBR143C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"eRF1 domain 2","id":"PF03464","interpro_description":"eRF1 domain 2","interpro_id":"IPR005141","interpro_name":"eRF1_2","locations":[{"end":276,"start":146}],"match_end":276,"match_start":146,"name":"eRF1_2"},{"dbname":"PFAM","description":"eRF1 domain 3","id":"PF03465","interpro_description":"eRF1 domain 3","interpro_id":"IPR005142","interpro_name":"eRF1_3","locations":[{"end":419,"start":280}],"match_end":419,"match_start":280,"name":"eRF1_3"},{"dbname":"PFAM","description":"eRF1 domain 1","id":"PF03463","interpro_description":"eRF1 domain 1/Pelota-like","interpro_id":"IPR005140","interpro_name":"eRF1_1_Pelota","locations":[{"end":139,"start":19}],"match_end":139,"match_start":19,"name":"eRF1_1"},{"dbname":"SMART","id":"SM01194","interpro_description":"eRF1 domain 1/Pelota-like","interpro_id":"IPR005140","interpro_name":"eRF1_1_Pelota","locations":[{"end":141,"start":6}],"match_end":141,"match_start":6,"name":"eRF1_1_2"},{"dbname":"FUNFAM","description":"Eukaryotic peptide chain release factor subunit 1","id":"G3DSA:3.30.420.60:FF:000001","locations":[{"end":276,"start":137}],"match_end":276,"match_start":137},{"dbname":"FUNFAM","description":"Peptide chain release factor subunit 1","id":"G3DSA:3.30.1330.30:FF:000006","locations":[{"end":434,"start":278}],"match_end":434,"match_start":278},{"dbname":"FUNFAM","description":"Eukaryotic peptide chain release factor subunit 1","id":"G3DSA:3.30.960.10:FF:000002","locations":[{"end":136,"start":5}],"match_end":136,"match_start":5},{"dbname":"SUPERFAMILY","id":"SSF55481","interpro_description":"eRF1, domain 1","interpro_id":"IPR024049","interpro_name":"eRF1_1_sf","locations":[{"end":141,"start":8}],"match_end":141,"match_start":8,"name":"N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1"},{"dbname":"SUPERFAMILY","id":"SSF55315","interpro_description":"Ribosomal protein eL30-like superfamily","interpro_id":"IPR029064","interpro_name":"Ribosomal_eL30-like_sf","locations":[{"end":421,"start":277}],"match_end":421,"match_start":277,"name":"L30e-like"},{"dbname":"SUPERFAMILY","id":"SSF53137","locations":[{"end":275,"start":143}],"match_end":275,"match_start":143,"name":"Translational machinery components"},{"dbname":"GENE3D","id":"G3DSA:3.30.420.60","interpro_description":"eRF1, domain 2 superfamily","interpro_id":"IPR042226","interpro_name":"eFR1_2_sf","locations":[{"end":276,"start":137}],"match_end":276,"match_start":137,"name":"eRF1 domain 2"},{"dbname":"GENE3D","id":"G3DSA:3.30.1330.30","interpro_description":"Ribosomal protein eL30-like superfamily","interpro_id":"IPR029064","interpro_name":"Ribosomal_eL30-like_sf","locations":[{"end":434,"start":278}],"match_end":434,"match_start":278},{"dbname":"GENE3D","id":"G3DSA:3.30.960.10","interpro_description":"eRF1, domain 1","interpro_id":"IPR024049","interpro_name":"eRF1_1_sf","locations":[{"end":136,"start":1}],"match_end":136,"match_start":1,"name":"eRF1 domain 1"},{"dbname":"PANTHER","id":"PTHR10113","interpro_description":"Peptide chain release factor eRF1/aRF1","interpro_id":"IPR004403","interpro_name":"Peptide_chain-rel_eRF1/aRF1","locations":[{"end":430,"start":2}],"match_end":430,"match_start":2,"name":"PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1"},{"dbname":"NCBIFAM","description":"peptide chain release factor aRF-1","id":"TIGR03676","interpro_description":"Peptide chain release factor eRF1/aRF1","interpro_id":"IPR004403","interpro_name":"Peptide_chain-rel_eRF1/aRF1","locations":[{"end":418,"start":14}],"match_end":418,"match_start":14,"name":"aRF1_eRF1"}],"location":{"chromosome_name":"supercont5.1","end_pos":3551086,"start_pos":3549782,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":429,"start":418}}],"name":"erf1","ortholog_annotations":[{"gene_uniquename":"SJAG_00338","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:3477","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00338","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1834.01","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00338","ortholog_taxonid":4932,"ortholog_uniquename":"YBR143C","reference_uniquename":"PMID:29761456"}],"product":"cytoplasmic translation release factor class I eRF1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:1990825"],"not-binding":["GO:0016149","GO:0030695"]}},"subset_termids":["GO:0030234","GO:0098772","GO:0005829","GO:0002181"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0002184":null,"GO:0005829":null,"GO:0016149":null,"GO:0018444":null,"GO:0030695":null,"GO:1990825":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00338.1"],"transcripts_by_uniquename":{"SJAG_00338.1":null},"uniprot_identifier":"B6JVD1","uniquename":"SJAG_00338"}


id: SJAG_00339
data:
  {"cv_annotations":{"biological_process":[{"annotations":[73533],"is_not":false,"summary":null,"term":"GO:1990570"}],"cellular_component":[{"annotations":[59717],"is_not":false,"summary":null,"term":"GO:0030659"},{"annotations":[59716],"is_not":false,"summary":null,"term":"GO:0005789"},{"annotations":[59715],"is_not":false,"summary":null,"term":"GO:0000139"}],"molecular_function":[{"annotations":[73534],"is_not":false,"summary":null,"term":"GO:0015297"},{"annotations":[73531],"is_not":false,"summary":null,"term":"GO:0005458"}],"mondo":[{"annotations":[88708],"is_not":false,"summary":null,"term":"MONDO:0010013"}]},"dbxrefs":["GOA:B6JVD2","UniProtKB/TrEMBL:B6JVD2","EnsemblGenomes-Gn:SJAG_00339","EnsemblGenomes-Tr:EEB05333","InterPro:IPR038736"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"tsr1","uniquename":"SJAG_00344"},{"name":"not11","uniquename":"SJAG_00343"},{"name":"srb10","uniquename":"SJAG_00342"},{"name":"rbx1","uniquename":"SJAG_00341"},{"name":"ecm33","uniquename":"SJAG_00340"},{"name":"vrg4","uniquename":"SJAG_00339"},{"name":"erf1","uniquename":"SJAG_00338"},{"name":"aro1","uniquename":"SJAG_00337"},{"name":"hhf1","uniquename":"SJAG_00336"},{"name":"hht1","uniquename":"SJAG_00335"},{"name":"alg9","uniquename":"SJAG_00334"}],"genes_by_uniquename":{"HGNC:20799":null,"HGNC:20800":null,"SJAG_00339":null,"SPAC144.18":null,"YER039C":null,"YER039C-A":null,"YGL225W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"SUPERFAMILY","id":"SSF103481","locations":[{"end":311,"start":203}],"match_end":311,"match_start":203,"name":"Multidrug resistance efflux transporter EmrE"},{"dbname":"PANTHER","id":"PTHR11132","interpro_description":"Triose Phosphate/Phosphate Translocator","interpro_id":"IPR050186","interpro_name":"TPT_transporter","locations":[{"end":315,"start":14}],"match_end":315,"match_start":14,"name":"SOLUTE CARRIER FAMILY 35"},{"dbname":"NCBIFAM","description":"solute carrier family 35 transporter","id":"TIGR00803","locations":[{"end":307,"start":157}],"match_end":307,"match_start":157,"name":"nst"}],"location":{"chromosome_name":"supercont5.1","end_pos":3549032,"start_pos":3548001,"strand":"forward"},"name":"vrg4","ortholog_annotations":[{"gene_uniquename":"SJAG_00339","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:20799","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00339","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:20800","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00339","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC144.18","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00339","ortholog_taxonid":4932,"ortholog_uniquename":"YER039C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00339","ortholog_taxonid":4932,"ortholog_uniquename":"YER039C","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_00339","ortholog_taxonid":4932,"ortholog_uniquename":"YER039C-A","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_00339","ortholog_taxonid":4932,"ortholog_uniquename":"YGL225W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00339","ortholog_taxonid":4932,"ortholog_uniquename":"YGL225W","reference_uniquename":"PMID:26896847"}],"product":"Golgi GDP-mannose transmembrane transporter Vrg4","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0015297","GO:0005458"]}},"subset_termids":["MONDO:0005497","MONDO:0005066","GO:0005789","GO:0055085","MONDO:0024322","GO:0022857","GO:0031410","GO:0005794","GO:0005783"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000139":null,"GO:0005458":null,"GO:0005789":null,"GO:0015297":null,"GO:0030659":null,"GO:1990570":null,"MONDO:0010013":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":29,"start":12}},{"assigned_by":"TMHMM","range":{"end":66,"start":44}},{"assigned_by":"TMHMM","range":{"end":101,"start":79}},{"assigned_by":"TMHMM","range":{"end":127,"start":105}},{"assigned_by":"TMHMM","range":{"end":150,"start":132}},{"assigned_by":"TMHMM","range":{"end":182,"start":160}},{"assigned_by":"TMHMM","range":{"end":221,"start":199}},{"assigned_by":"TMHMM","range":{"end":258,"start":236}},{"assigned_by":"TMHMM","range":{"end":287,"start":265}},{"assigned_by":"TMHMM","range":{"end":310,"start":291}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00339.1"],"transcripts_by_uniquename":{"SJAG_00339.1":null},"uniprot_identifier":"B6JVD2","uniquename":"SJAG_00339"}


id: SJAG_00340
data:
  {"chains":[{"assigned_by":"UniProtKB","range":{"end":424,"start":24}}],"cv_annotations":{"biological_process":[{"annotations":[91740],"is_not":false,"summary":null,"term":"GO:0035556"}],"cellular_component":[{"annotations":[91738],"is_not":false,"summary":null,"term":"GO:0009897"},{"annotations":[91739],"is_not":false,"summary":null,"term":"GO:0009277"}],"sequence":[{"annotations":[82205],"is_not":false,"summary":null,"term":"SO:0000418"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_00340","EnsemblGenomes-Tr:EEB05334","UniProtKB/TrEMBL:B6JVD3","GOA:B6JVD3"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"vam6","uniquename":"SJAG_05184"},{"name":"tsr1","uniquename":"SJAG_00344"},{"name":"not11","uniquename":"SJAG_00343"},{"name":"srb10","uniquename":"SJAG_00342"},{"name":"rbx1","uniquename":"SJAG_00341"},{"name":"ecm33","uniquename":"SJAG_00340"},{"name":"vrg4","uniquename":"SJAG_00339"},{"name":"erf1","uniquename":"SJAG_00338"},{"name":"aro1","uniquename":"SJAG_00337"},{"name":"hhf1","uniquename":"SJAG_00336"},{"name":"hht1","uniquename":"SJAG_00335"}],"genes_by_uniquename":{"SJAG_00340":null,"SPAC1705.03c":null,"YBR078W":null,"YCL048W":null,"YDR055W":null,"YDR522C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"SUPERFAMILY","id":"SSF52058","locations":[{"end":126,"start":29},{"end":304,"start":223}],"match_end":304,"match_start":29,"name":"L domain-like"},{"dbname":"GENE3D","id":"G3DSA:3.80.20.20","interpro_description":"Receptor L-domain superfamily","interpro_id":"IPR036941","interpro_name":"Rcpt_L-dom_sf","locations":[{"end":199,"start":28},{"end":332,"start":247}],"match_end":332,"match_start":28},{"dbname":"PANTHER","id":"PTHR31018","interpro_description":"Cell Wall Integrity and Assembly Regulator","interpro_id":"IPR051648","interpro_name":"CWI-Assembly_Regulator","locations":[{"end":396,"start":16}],"match_end":396,"match_start":16,"name":"SPORULATION-SPECIFIC PROTEIN-RELATED"}],"location":{"chromosome_name":"supercont5.1","end_pos":3546539,"start_pos":3545265,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":22,"start":9}},{"range":{"end":82,"start":72}},{"range":{"end":408,"start":351}}],"name":"ecm33","ortholog_annotations":[{"gene_uniquename":"SJAG_00340","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1705.03c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00340","ortholog_taxonid":4932,"ortholog_uniquename":"YBR078W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00340","ortholog_taxonid":4932,"ortholog_uniquename":"YBR078W","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_00340","ortholog_taxonid":4932,"ortholog_uniquename":"YCL048W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00340","ortholog_taxonid":4932,"ortholog_uniquename":"YCL048W","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_00340","ortholog_taxonid":4932,"ortholog_uniquename":"YDR055W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00340","ortholog_taxonid":4932,"ortholog_uniquename":"YDR055W","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_00340","ortholog_taxonid":4932,"ortholog_uniquename":"YDR522C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00340","ortholog_taxonid":4932,"ortholog_uniquename":"YDR522C","reference_uniquename":"PMID:26896847"}],"product":"GPI anchored cell surface receptor L domain-like Ecm33","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null,"PMID:36408920":null},"signal_peptide":{"assigned_by":"UniProtKB","evidence":"ECO:0000256","feature_type":"signal peptide","range":{"end":23,"start":1},"reference":null,"termid":"SO:0000418"},"split_by_parent_groups":{},"subset_termids":["GO:0005886","GO:0009986","GO:0023052","GO:0005618"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0009277":null,"GO:0009897":null,"GO:0035556":null,"SO:0000418":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00340.1"],"transcripts_by_uniquename":{"SJAG_00340.1":null},"uniprot_identifier":"B6JVD3","uniquename":"SJAG_00340"}


id: SJAG_00341
data:
  {"cv_annotations":{"biological_process":[{"annotations":[96160],"is_not":false,"summary":null,"term":"GO:0031508"},{"annotations":[96161],"is_not":false,"summary":null,"term":"GO:0031146"},{"annotations":[96162],"is_not":false,"summary":null,"term":"GO:0030466"},{"annotations":[96163],"is_not":false,"summary":null,"term":"GO:0031509"}],"cellular_component":[{"annotations":[96155],"is_not":false,"summary":null,"term":"GO:0043494"},{"annotations":[96157],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[96158],"is_not":false,"summary":null,"term":"GO:0043224"}],"molecular_function":[{"annotations":[79056],"is_not":false,"summary":null,"term":"GO:0097602"},{"annotations":[96164],"is_not":false,"summary":null,"term":"GO:0140851"},{"annotations":[67232],"is_not":false,"summary":null,"term":"GO:0008270"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_00341","GOA:B6JVD4","EnsemblGenomes-Tr:EEB05335","InterPro:IPR001841","InterPro:IPR013083","InterPro:IPR024766","UniProtKB/TrEMBL:B6JVD4"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_00347"},{"name":"vam6","uniquename":"SJAG_05184"},{"name":"tsr1","uniquename":"SJAG_00344"},{"name":"not11","uniquename":"SJAG_00343"},{"name":"srb10","uniquename":"SJAG_00342"},{"name":"rbx1","uniquename":"SJAG_00341"},{"name":"ecm33","uniquename":"SJAG_00340"},{"name":"vrg4","uniquename":"SJAG_00339"},{"name":"erf1","uniquename":"SJAG_00338"},{"name":"aro1","uniquename":"SJAG_00337"},{"name":"hhf1","uniquename":"SJAG_00336"}],"genes_by_uniquename":{"HGNC:9928":null,"SJAG_00341":null,"SPAC23H4.18c":null,"YOL133W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"RING-H2 zinc finger domain","id":"PF12678","interpro_description":"Zinc finger, RING-H2-type","interpro_id":"IPR024766","interpro_name":"Znf_RING_H2","locations":[{"end":98,"start":40}],"match_end":98,"match_start":40,"name":"zf-rbx1"},{"dbname":"CDD","description":"mRING-H2-C3H2C2D_RBX1","id":"cd16485","locations":[{"end":101,"start":40}],"match_end":101,"match_start":40,"name":"mRING-H2-C3H2C2D_RBX1"},{"dbname":"PROSITE_PROFILES","description":"Zinc finger RING-type profile.","id":"PS50089","interpro_description":"Zinc finger, RING-type","interpro_id":"IPR001841","interpro_name":"Znf_RING","locations":[{"end":98,"start":42}],"match_end":98,"match_start":42,"name":"ZF_RING_2"},{"dbname":"FUNFAM","description":"E3 ubiquitin-protein ligase RBX1","id":"G3DSA:3.30.40.10:FF:000010","locations":[{"end":108,"start":9}],"match_end":108,"match_start":9},{"dbname":"SUPERFAMILY","id":"SSF57850","locations":[{"end":105,"start":20}],"match_end":105,"match_start":20,"name":"RING/U-box"},{"dbname":"GENE3D","id":"G3DSA:3.30.40.10","interpro_description":"Zinc finger, RING/FYVE/PHD-type","interpro_id":"IPR013083","interpro_name":"Znf_RING/FYVE/PHD","locations":[{"end":108,"start":10}],"match_end":108,"match_start":10,"name":"Zinc/RING finger domain, C3HC4 (zinc finger)"},{"dbname":"PANTHER","id":"PTHR11210","interpro_description":"RING-box E3 Ubiquitin Ligase","interpro_id":"IPR051031","interpro_name":"RING-box_E3_Ubiquitin_Ligase","locations":[{"end":107,"start":19}],"match_end":107,"match_start":19,"name":"RING BOX"}],"location":{"chromosome_name":"supercont5.1","end_pos":3544378,"start_pos":3543861,"strand":"reverse"},"name":"rbx1","ortholog_annotations":[{"gene_uniquename":"SJAG_00341","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9928","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00341","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC23H4.18c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00341","ortholog_taxonid":4932,"ortholog_uniquename":"YOL133W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00341","ortholog_taxonid":4932,"ortholog_uniquename":"YOL133W","reference_uniquename":"PMID:26896847"}],"product":"SCF complex, Cul4-RING and CLRC ubiquitin ligase ligase E3 subunit Rbx1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0097602","GO:0008270"],"not-binding":["GO:0140851"]}},"subset_termids":["GO:0006325","GO:0005634","GO:0140096","GO:0019787","GO:0030163","GO:0005654","GO:0005829","GO:0016746"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005829":null,"GO:0008270":null,"GO:0030466":null,"GO:0031146":null,"GO:0031508":null,"GO:0031509":null,"GO:0043224":null,"GO:0043494":null,"GO:0097602":null,"GO:0140851":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00341.1"],"transcripts_by_uniquename":{"SJAG_00341.1":null},"uniprot_identifier":"B6JVD4","uniquename":"SJAG_00341"}


id: SJAG_00342
data:
  {"cv_annotations":{"biological_process":[{"annotations":[96149],"is_not":false,"summary":null,"term":"GO:0060261"}],"cellular_component":[{"annotations":[96146],"is_not":false,"summary":null,"term":"GO:0000791"},{"annotations":[81185],"is_not":false,"summary":null,"term":"GO:0016592"}],"molecular_function":[{"annotations":[70163],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[81186],"is_not":false,"summary":null,"term":"GO:0004693"},{"annotations":[96152],"is_not":false,"summary":null,"term":"GO:0140834"},{"annotations":[96153],"is_not":false,"summary":null,"term":"GO:0140836"},{"annotations":[96154],"is_not":false,"summary":null,"term":"GO:0003713"}],"mondo":[{"annotations":[87136],"is_not":false,"summary":null,"term":"MONDO:0030059"},{"annotations":[88475],"is_not":false,"summary":null,"term":"MONDO:0032897"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB05336","GOA:B6JVD5","EnsemblGenomes-Gn:SJAG_00342","InterPro:IPR000719","InterPro:IPR008271","InterPro:IPR011009","UniProtKB/TrEMBL:B6JVD5"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_00348"},{"uniquename":"SJAG_00347"},{"name":"vam6","uniquename":"SJAG_05184"},{"name":"tsr1","uniquename":"SJAG_00344"},{"name":"not11","uniquename":"SJAG_00343"},{"name":"srb10","uniquename":"SJAG_00342"},{"name":"rbx1","uniquename":"SJAG_00341"},{"name":"ecm33","uniquename":"SJAG_00340"},{"name":"vrg4","uniquename":"SJAG_00339"},{"name":"erf1","uniquename":"SJAG_00338"},{"name":"aro1","uniquename":"SJAG_00337"}],"genes_by_uniquename":{"HGNC:1779":null,"HGNC:19338":null,"SJAG_00342":null,"SPAC23H4.17c":null,"YPL042C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Protein kinase domain","id":"PF00069","interpro_description":"Protein kinase domain","interpro_id":"IPR000719","interpro_name":"Prot_kinase_dom","locations":[{"end":320,"start":7}],"match_end":320,"match_start":7,"name":"Pkinase"},{"dbname":"CDD","description":"STKc_CDK8_like","id":"cd07842","locations":[{"end":320,"start":5}],"match_end":320,"match_start":5,"name":"STKc_CDK8_like"},{"dbname":"PROSITE_PATTERNS","description":"Serine/Threonine protein kinases active-site signature.","id":"PS00108","interpro_description":"Serine/threonine-protein kinase, active site","interpro_id":"IPR008271","interpro_name":"Ser/Thr_kinase_AS","locations":[{"end":149,"start":137}],"match_end":149,"match_start":137,"name":"PROTEIN_KINASE_ST"},{"dbname":"PROSITE_PROFILES","description":"Protein kinase domain profile.","id":"PS50011","interpro_description":"Protein kinase domain","interpro_id":"IPR000719","interpro_name":"Prot_kinase_dom","locations":[{"end":320,"start":6}],"match_end":320,"match_start":6,"name":"PROTEIN_KINASE_DOM"},{"dbname":"SMART","id":"SM00220","interpro_description":"Protein kinase domain","interpro_id":"IPR000719","interpro_name":"Prot_kinase_dom","locations":[{"end":320,"start":6}],"match_end":320,"match_start":6,"name":"serkin_6"},{"dbname":"FUNFAM","description":"Serine/threonine-protein kinase SSN3","id":"G3DSA:1.10.510.10:FF:000408","locations":[{"end":337,"start":90}],"match_end":337,"match_start":90},{"dbname":"SUPERFAMILY","id":"SSF56112","interpro_description":"Protein kinase-like domain superfamily","interpro_id":"IPR011009","interpro_name":"Kinase-like_dom_sf","locations":[{"end":322,"start":4}],"match_end":322,"match_start":4,"name":"Protein kinase-like (PK-like)"},{"dbname":"GENE3D","id":"G3DSA:1.10.510.10","locations":[{"end":338,"start":91}],"match_end":338,"match_start":91,"name":"Transferase(Phosphotransferase) domain 1"},{"dbname":"GENE3D","id":"G3DSA:3.30.200.20","locations":[{"end":90,"start":1}],"match_end":90,"match_start":1,"name":"Phosphorylase Kinase; domain 1"},{"dbname":"PANTHER","id":"PTHR24056","interpro_description":"Cyclin-dependent kinase","interpro_id":"IPR050108","interpro_name":"CDK","locations":[{"end":321,"start":4}],"match_end":321,"match_start":4,"name":"CELL DIVISION PROTEIN KINASE"}],"location":{"chromosome_name":"supercont5.1","end_pos":3543491,"start_pos":3542335,"strand":"reverse"},"name":"srb10","ortholog_annotations":[{"gene_uniquename":"SJAG_00342","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:1779","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00342","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:19338","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00342","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC23H4.17c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00342","ortholog_taxonid":4932,"ortholog_uniquename":"YPL042C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00342","ortholog_taxonid":4932,"ortholog_uniquename":"YPL042C","reference_uniquename":"PMID:26896847"}],"product":"mediator complex cyclin-dependent protein kinase subunit Srb10","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005524"],"not-binding":["GO:0004693","GO:0140834","GO:0140836","GO:0003713"]}},"subset_termids":["GO:0004672","GO:0060090","GO:0006355","MONDO:0005027","GO:0016301","GO:0140096","MONDO:0700092","GO:0005634","GO:0005694","GO:0006351","GO:0003713","GO:0003712"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000791":null,"GO:0003713":null,"GO:0004693":null,"GO:0005524":null,"GO:0016592":null,"GO:0060261":null,"GO:0140834":null,"GO:0140836":null,"MONDO:0030059":null,"MONDO:0032897":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00342.1"],"transcripts_by_uniquename":{"SJAG_00342.1":null},"uniprot_identifier":"B6JVD5","uniquename":"SJAG_00342"}


id: SJAG_00343
data:
  {"cv_annotations":{"biological_process":[{"annotations":[96145],"is_not":false,"summary":null,"term":"GO:0000289"}],"cellular_component":[{"annotations":[96142],"is_not":false,"summary":null,"term":"GO:0030015"},{"annotations":[96143],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[96144],"is_not":false,"summary":null,"term":"GO:0005634"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB05337","UniProtKB/TrEMBL:B6JVD6","EnsemblGenomes-Gn:SJAG_00343"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"alp13","uniquename":"SJAG_00349"},{"uniquename":"SJAG_00348"},{"uniquename":"SJAG_00347"},{"name":"vam6","uniquename":"SJAG_05184"},{"name":"tsr1","uniquename":"SJAG_00344"},{"name":"not11","uniquename":"SJAG_00343"},{"name":"srb10","uniquename":"SJAG_00342"},{"name":"rbx1","uniquename":"SJAG_00341"},{"name":"ecm33","uniquename":"SJAG_00340"},{"name":"vrg4","uniquename":"SJAG_00339"},{"name":"erf1","uniquename":"SJAG_00338"}],"genes_by_uniquename":{"HGNC:25217":null,"SJAG_00343":null,"SPAC23H4.16c":null,"YGR134W":null},"has_protein_features":true,"location":{"chromosome_name":"supercont5.1","end_pos":3542147,"start_pos":3541034,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":217,"start":202}}],"name":"not11","ortholog_annotations":[{"gene_uniquename":"SJAG_00343","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:25217","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00343","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC23H4.16c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00343","ortholog_taxonid":4932,"ortholog_uniquename":"YGR134W","reference_uniquename":"PMID:29761456"}],"product":"CCR4-Not complex subunit 11","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0005829","GO:0005634","GO:0016071"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000289":null,"GO:0005634":null,"GO:0005829":null,"GO:0030015":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00343.1"],"transcripts_by_uniquename":{"SJAG_00343.1":null},"uniprot_identifier":"B6JVD6","uniquename":"SJAG_00343"}


id: SJAG_00344
data:
  {"coiled_coil_coords":[{"range":{"end":467,"start":447}}],"cv_annotations":{"biological_process":[{"annotations":[76153],"is_not":false,"summary":null,"term":"GO:0000479"},{"annotations":[76157],"is_not":false,"summary":null,"term":"GO:0000462"}],"cellular_component":[{"annotations":[96134],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[96135],"is_not":false,"summary":null,"term":"GO:0005730"}],"molecular_function":[{"annotations":[76154],"is_not":false,"summary":null,"term":"GO:0005525"},{"annotations":[76155],"is_not":false,"summary":null,"term":"GO:0003924"},{"annotations":[76156],"is_not":false,"summary":null,"term":"GO:0034511"}]},"dbxrefs":["InterPro:IPR012948","InterPro:IPR039761","UniProtKB/TrEMBL:B6JVD7","InterPro:IPR030387","EnsemblGenomes-Gn:SJAG_00344","EnsemblGenomes-Tr:EEB05338","GOA:B6JVD7","InterPro:IPR007034"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":62,"start":1}},{"range":{"end":332,"start":304}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cnl2","uniquename":"SJAG_00350"},{"name":"alp13","uniquename":"SJAG_00349"},{"uniquename":"SJAG_00348"},{"uniquename":"SJAG_00347"},{"name":"vam6","uniquename":"SJAG_05184"},{"name":"tsr1","uniquename":"SJAG_00344"},{"name":"not11","uniquename":"SJAG_00343"},{"name":"srb10","uniquename":"SJAG_00342"},{"name":"rbx1","uniquename":"SJAG_00341"},{"name":"ecm33","uniquename":"SJAG_00340"},{"name":"vrg4","uniquename":"SJAG_00339"}],"genes_by_uniquename":{"HGNC:25542":null,"SJAG_00344":null,"SPAC23H4.15":null,"YDL060W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Tsr1, G-like domain","id":"PF22298","locations":[{"end":238,"start":85}],"match_end":238,"match_start":85,"name":"Tsr1_G-like"},{"dbname":"PFAM","description":"40S ribosome biogenesis protein Tsr1 and BMS1 C-terminal","id":"PF04950","interpro_description":"Ribosome biogenesis protein BMS1/TSR1, C-terminal","interpro_id":"IPR007034","interpro_name":"BMS1_TSR1_C","locations":[{"end":763,"start":474}],"match_end":763,"match_start":474,"name":"RIBIOP_C"},{"dbname":"PFAM","description":"AARP2CN (NUC121) domain","id":"PF08142","interpro_description":"AARP2CN","interpro_id":"IPR012948","interpro_name":"AARP2CN","locations":[{"end":298,"start":241}],"match_end":298,"match_start":241,"name":"AARP2CN"},{"dbname":"PROSITE_PROFILES","description":"Bms1-type guanine nucleotide-binding (G) domain profile.","id":"PS51714","interpro_description":"Bms1/Tsr1-type G domain","interpro_id":"IPR030387","interpro_name":"G_Bms1/Tsr1_dom","locations":[{"end":242,"start":83}],"match_end":242,"match_start":83,"name":"G_BMS1"},{"dbname":"SMART","id":"SM01362","interpro_description":"Ribosome biogenesis protein BMS1/TSR1, C-terminal","interpro_id":"IPR007034","interpro_name":"BMS1_TSR1_C","locations":[{"end":761,"start":473}],"match_end":761,"match_start":473,"name":"DUF663_2"},{"dbname":"SMART","id":"SM00785","interpro_description":"AARP2CN","interpro_id":"IPR012948","interpro_name":"AARP2CN","locations":[{"end":300,"start":228}],"match_end":300,"match_start":228,"name":"aarp2cn2"},{"dbname":"PANTHER","id":"PTHR12858","interpro_description":"Ribosome biogenesis protein Bms1/Tsr1","interpro_id":"IPR039761","interpro_name":"Bms1/Tsr1","locations":[{"end":766,"start":11}],"match_end":766,"match_start":11,"name":"RIBOSOME BIOGENESIS PROTEIN"},{"dbname":"COILS","id":"Coil","locations":[{"end":467,"start":447}],"match_end":467,"match_start":447,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":62,"start":1},{"end":332,"start":304}],"match_end":332,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":38,"start":27}],"match_end":38,"match_start":27,"name":"disorder_prediction"},{"dbname":"MOBIDB-Positive-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Positive-Polyelectrolyte","locations":[{"end":24,"start":1}],"match_end":24,"match_start":1,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3540874,"start_pos":3538550,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":30,"start":3}},{"range":{"end":351,"start":337}},{"range":{"end":421,"start":401}},{"range":{"end":436,"start":428}},{"range":{"end":474,"start":455}}],"name":"tsr1","ortholog_annotations":[{"gene_uniquename":"SJAG_00344","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:25542","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00344","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC23H4.15","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00344","ortholog_taxonid":4932,"ortholog_uniquename":"YDL060W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00344","ortholog_taxonid":4932,"ortholog_uniquename":"YDL060W","reference_uniquename":"PMID:26896847"}],"product":"ribosome biogenesis protein Tsr1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0034511","GO:0005525"],"not-binding":["GO:0003924"]}},"subset_termids":["GO:0042254","GO:0003924","GO:0005730","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000462":null,"GO:0000479":null,"GO:0003924":null,"GO:0005525":null,"GO:0005730":null,"GO:0005737":null,"GO:0034511":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00344.1"],"transcripts_by_uniquename":{"SJAG_00344.1":null},"uniprot_identifier":"B6JVD7","uniquename":"SJAG_00344"}


id: SJAG_00347
data:
  {"cv_annotations":{},"dbxrefs":["EnsemblGenomes-Gn:SJAG_00347","EnsemblGenomes-Tr:EEB05340","UniProtKB/TrEMBL:B6JVD9"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"tad3","uniquename":"SJAG_00352"},{"uniquename":"SJAG_00351"},{"name":"cnl2","uniquename":"SJAG_00350"},{"name":"alp13","uniquename":"SJAG_00349"},{"uniquename":"SJAG_00348"},{"uniquename":"SJAG_00347"},{"name":"vam6","uniquename":"SJAG_05184"},{"name":"tsr1","uniquename":"SJAG_00344"},{"name":"not11","uniquename":"SJAG_00343"},{"name":"srb10","uniquename":"SJAG_00342"},{"name":"rbx1","uniquename":"SJAG_00341"}],"genes_by_uniquename":{"SJAG_00347":null,"SPAC23H4.21":null,"YLR407W":null},"has_protein_features":true,"location":{"chromosome_name":"supercont5.1","end_pos":3535046,"start_pos":3534738,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":66,"start":53}}],"ortholog_annotations":[{"gene_uniquename":"SJAG_00347","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC23H4.21","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00347","ortholog_taxonid":4932,"ortholog_uniquename":"YLR407W","reference_uniquename":"PMID:29761456"}],"product":"DUF4050 family protein, conserved in fungi and plants","references_by_uniquename":{"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{},"taxonid":4897,"taxonomic_distribution":"other","transcript_so_termid":"SO:0000234","transcripts":["SJAG_00347.1"],"transcripts_by_uniquename":{"SJAG_00347.1":null},"uniprot_identifier":"B6JVD9","uniquename":"SJAG_00347"}


id: SJAG_00348
data:
  {"coiled_coil_coords":[{"range":{"end":109,"start":82}}],"cv_annotations":{"cellular_component":[{"annotations":[96120],"is_not":false,"summary":null,"term":"GO:0005783"},{"annotations":[96121],"is_not":false,"summary":null,"term":"GO:0005794"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JVE0","GOA:B6JVE0","EnsemblGenomes-Gn:SJAG_00348","EnsemblGenomes-Tr:EEB05341"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cdc123","uniquename":"SJAG_00353"},{"name":"tad3","uniquename":"SJAG_00352"},{"uniquename":"SJAG_00351"},{"name":"cnl2","uniquename":"SJAG_00350"},{"name":"alp13","uniquename":"SJAG_00349"},{"uniquename":"SJAG_00348"},{"uniquename":"SJAG_00347"},{"name":"vam6","uniquename":"SJAG_05184"},{"name":"tsr1","uniquename":"SJAG_00344"},{"name":"not11","uniquename":"SJAG_00343"},{"name":"srb10","uniquename":"SJAG_00342"}],"genes_by_uniquename":{"SJAG_00348":null,"SPAC23H4.13c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"COILS","id":"Coil","locations":[{"end":109,"start":82}],"match_end":109,"match_start":82,"name":"Coil"}],"location":{"chromosome_name":"supercont5.1","end_pos":3534454,"start_pos":3533814,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":19,"start":5}},{"range":{"end":85,"start":70}}],"ortholog_annotations":[{"gene_uniquename":"SJAG_00348","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC23H4.13c","reference_uniquename":"PMID:21511999"}],"product":"Schizosaccharomyces specific protein","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null},"split_by_parent_groups":{},"subset_termids":["GO:0005794","GO:0005783"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005783":null,"GO:0005794":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":42,"start":20}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00348.1"],"transcripts_by_uniquename":{"SJAG_00348.1":null},"uniprot_identifier":"B6JVE0","uniquename":"SJAG_00348"}


id: SJAG_00349
data:
  {"cv_annotations":{"biological_process":[{"annotations":[96116],"is_not":false,"summary":null,"term":"GO:0140861"},{"annotations":[61218],"is_not":false,"summary":null,"term":"GO:0006355"},{"annotations":[96118],"is_not":false,"summary":null,"term":"GO:0045815"}],"cellular_component":[{"annotations":[74711],"is_not":false,"summary":null,"term":"GO:0035267"},{"annotations":[74710],"is_not":false,"summary":null,"term":"GO:0032221"}]},"dbxrefs":["GOA:B6JVE1","InterPro:IPR000953","InterPro:IPR016197","InterPro:IPR025995","EnsemblGenomes-Gn:SJAG_00349","InterPro:IPR038217","UniProtKB/TrEMBL:B6JVE1","InterPro:IPR026541","InterPro:IPR008676","EnsemblGenomes-Tr:EEB05342"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":157,"start":76}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mgr3","uniquename":"SJAG_00354"},{"name":"cdc123","uniquename":"SJAG_00353"},{"name":"tad3","uniquename":"SJAG_00352"},{"uniquename":"SJAG_00351"},{"name":"cnl2","uniquename":"SJAG_00350"},{"name":"alp13","uniquename":"SJAG_00349"},{"uniquename":"SJAG_00348"},{"uniquename":"SJAG_00347"},{"name":"vam6","uniquename":"SJAG_05184"},{"name":"tsr1","uniquename":"SJAG_00344"},{"name":"not11","uniquename":"SJAG_00343"}],"genes_by_uniquename":{"HGNC:15773":null,"HGNC:16849":null,"HGNC:16989":null,"SJAG_00349":null,"SPAC23H4.12":null,"YPR023C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"MSL3 chromodomain-like","id":"PF22732","interpro_description":"MSL3 chromodomain-like","interpro_id":"IPR053820","interpro_name":"MSL3_chromo-like","locations":[{"end":70,"start":4}],"match_end":70,"match_start":4,"name":"MSL3_chromo-like"},{"dbname":"PFAM","description":"MRG","id":"PF05712","interpro_description":"MRG domain","interpro_id":"IPR026541","interpro_name":"MRG_dom","locations":[{"end":304,"start":154}],"match_end":304,"match_start":154,"name":"MRG"},{"dbname":"CDD","description":"CBD_MSL3_like","id":"cd18983","locations":[{"end":64,"start":8}],"match_end":64,"match_start":8,"name":"CBD_MSL3_like"},{"dbname":"PROSITE_PROFILES","description":"MRG domain profile.","id":"PS51640","locations":[{"end":334,"start":160}],"match_end":334,"match_start":160,"name":"MRG"},{"dbname":"SMART","id":"SM00298","interpro_description":"Chromo/chromo shadow domain","interpro_id":"IPR000953","interpro_name":"Chromo/chromo_shadow_dom","locations":[{"end":71,"start":18}],"match_end":71,"match_start":18,"name":"chromo_7"},{"dbname":"SUPERFAMILY","id":"SSF54160","interpro_description":"Chromo-like domain superfamily","interpro_id":"IPR016197","interpro_name":"Chromo-like_dom_sf","locations":[{"end":94,"start":2},{"end":185,"start":159}],"match_end":185,"match_start":2,"name":"Chromo domain-like"},{"dbname":"GENE3D","id":"G3DSA:2.30.30.140","locations":[{"end":82,"start":1}],"match_end":82,"match_start":1},{"dbname":"GENE3D","id":"G3DSA:1.10.274.30","interpro_description":"MRG, C-terminal domain superfamily","interpro_id":"IPR038217","interpro_name":"MRG_C_sf","locations":[{"end":308,"start":160}],"match_end":308,"match_start":160,"name":"MRG domain"},{"dbname":"PANTHER","id":"PTHR10880","interpro_description":"MRG","interpro_id":"IPR008676","interpro_name":"MRG","locations":[{"end":305,"start":3}],"match_end":305,"match_start":3,"name":"MORTALITY FACTOR 4-LIKE PROTEIN"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":157,"start":76}],"match_end":157,"match_start":76,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":105,"start":88}],"match_end":105,"match_start":88,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":141,"start":130}],"match_end":141,"match_start":130,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3534033,"start_pos":3532690,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":95,"start":74}},{"range":{"end":116,"start":99}}],"name":"alp13","ortholog_annotations":[{"gene_uniquename":"SJAG_00349","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:15773","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00349","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:16849","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00349","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:16989","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00349","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC23H4.12","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00349","ortholog_taxonid":4932,"ortholog_uniquename":"YPR023C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00349","ortholog_taxonid":4932,"ortholog_uniquename":"YPR023C","reference_uniquename":"PMID:26896847"}],"product":"Clr6 histone deacetylase complex, chromodomain subunit Alp13/Eaf3","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0005694","GO:0006325","GO:0006355","GO:0005634","GO:0006351","GO:0005654"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0006355":null,"GO:0032221":null,"GO:0035267":null,"GO:0045815":null,"GO:0140861":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00349.1"],"transcripts_by_uniquename":{"SJAG_00349.1":null},"uniprot_identifier":"B6JVE1","uniquename":"SJAG_00349"}


id: SJAG_00350
data:
  {"coiled_coil_coords":[{"range":{"end":233,"start":206}}],"cv_annotations":{"biological_process":[{"annotations":[96112],"is_not":false,"summary":null,"term":"GO:0000070"}],"cellular_component":[{"annotations":[96109],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[96110],"is_not":false,"summary":null,"term":"GO:0031511"},{"annotations":[96111],"is_not":false,"summary":null,"term":"GO:0005634"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB05343","EnsemblGenomes-Gn:SJAG_00350","UniProtKB/TrEMBL:B6JVE2","InterPro:IPR018565","GOA:B6JVE2"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"osh3","uniquename":"SJAG_00355"},{"name":"mgr3","uniquename":"SJAG_00354"},{"name":"cdc123","uniquename":"SJAG_00353"},{"name":"tad3","uniquename":"SJAG_00352"},{"uniquename":"SJAG_00351"},{"name":"cnl2","uniquename":"SJAG_00350"},{"name":"alp13","uniquename":"SJAG_00349"},{"uniquename":"SJAG_00348"},{"uniquename":"SJAG_00347"},{"name":"vam6","uniquename":"SJAG_05184"},{"name":"tsr1","uniquename":"SJAG_00344"}],"genes_by_uniquename":{"SJAG_00350":null,"SPAC23H4.11c":null,"YLR315W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Cnl2/NKP2 family protein","id":"PF09447","interpro_description":"Kinetochore subunit Nkp2/Cnl2","interpro_id":"IPR018565","interpro_name":"Nkp2/Cnl2","locations":[{"end":65,"start":2}],"match_end":65,"match_start":2,"name":"Cnl2_NKP2"},{"dbname":"PANTHER","id":"PTHR28064","interpro_description":"Kinetochore subunit Nkp2/Cnl2","interpro_id":"IPR018565","interpro_name":"Nkp2/Cnl2","locations":[{"end":87,"start":1}],"match_end":87,"match_start":1,"name":"INNER KINETOCHORE SUBUNIT NKP2"},{"dbname":"COILS","id":"Coil","locations":[{"end":233,"start":206}],"match_end":233,"match_start":206,"name":"Coil"}],"location":{"chromosome_name":"supercont5.1","end_pos":3531918,"start_pos":3531064,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":57,"start":46}},{"range":{"end":130,"start":118}},{"range":{"end":242,"start":228}}],"name":"cnl2","ortholog_annotations":[{"gene_uniquename":"SJAG_00350","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC23H4.11c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00350","ortholog_taxonid":4932,"ortholog_uniquename":"YLR315W","reference_uniquename":"PMID:29761456"}],"product":"centromere localized protein Cnl2","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0005634","GO:0005829","GO:0000776","GO:0005694","GO:0000070"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000070":null,"GO:0005634":null,"GO:0005829":null,"GO:0031511":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00350.1"],"transcripts_by_uniquename":{"SJAG_00350.1":null},"uniprot_identifier":"B6JVE2","uniquename":"SJAG_00350"}


id: SJAG_00351
data:
  {"cv_annotations":{},"dbxrefs":["UniProtKB/TrEMBL:B6JVE3","EnsemblGenomes-Tr:EEB05344","EnsemblGenomes-Gn:SJAG_00351"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ppk9","uniquename":"SJAG_00356"},{"name":"osh3","uniquename":"SJAG_00355"},{"name":"mgr3","uniquename":"SJAG_00354"},{"name":"cdc123","uniquename":"SJAG_00353"},{"name":"tad3","uniquename":"SJAG_00352"},{"uniquename":"SJAG_00351"},{"name":"cnl2","uniquename":"SJAG_00350"},{"name":"alp13","uniquename":"SJAG_00349"},{"uniquename":"SJAG_00348"},{"uniquename":"SJAG_00347"},{"name":"vam6","uniquename":"SJAG_05184"}],"genes_by_uniquename":{"SJAG_00351":null},"has_protein_features":true,"location":{"chromosome_name":"supercont5.1","end_pos":3530697,"start_pos":3529663,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":127,"start":117}}],"product":"Schizosaccharomyces japonicus specific protein","split_by_parent_groups":{},"taxonid":4897,"taxonomic_distribution":"other","transcript_so_termid":"SO:0000234","transcripts":["SJAG_00351.1"],"transcripts_by_uniquename":{"SJAG_00351.1":null},"uniprot_identifier":"B6JVE3","uniquename":"SJAG_00351"}


id: SJAG_00352
data:
  {"coiled_coil_coords":[{"range":{"end":72,"start":52}}],"cv_annotations":{"biological_process":[{"annotations":[102931],"is_not":false,"summary":null,"term":"GO:0002100"}],"cellular_component":[{"annotations":[102928],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[102929],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[102930],"is_not":false,"summary":null,"term":"GO:0052718"}],"molecular_function":[{"annotations":[102932],"is_not":false,"summary":null,"term":"GO:0030234"}],"mondo":[{"annotations":[86803],"is_not":false,"summary":null,"term":"MONDO:0014119"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB05345","GOA:B6JVE4","InterPro:IPR002125","InterPro:IPR016193","EnsemblGenomes-Gn:SJAG_00352","UniProtKB/TrEMBL:B6JVE4"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"erv25","uniquename":"SJAG_00357"},{"name":"ppk9","uniquename":"SJAG_00356"},{"name":"osh3","uniquename":"SJAG_00355"},{"name":"mgr3","uniquename":"SJAG_00354"},{"name":"cdc123","uniquename":"SJAG_00353"},{"name":"tad3","uniquename":"SJAG_00352"},{"uniquename":"SJAG_00351"},{"name":"cnl2","uniquename":"SJAG_00350"},{"name":"alp13","uniquename":"SJAG_00349"},{"uniquename":"SJAG_00348"},{"uniquename":"SJAG_00347"}],"genes_by_uniquename":{"HGNC:25151":null,"SJAG_00352":null,"SPAP27G11.04c":null,"YLR316C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Cytidine and deoxycytidylate deaminase zinc-binding region","id":"PF00383","interpro_description":"Cytidine and deoxycytidylate deaminase domain","interpro_id":"IPR002125","interpro_name":"CMP_dCMP_dom","locations":[{"end":262,"start":152}],"match_end":262,"match_start":152,"name":"dCMP_cyt_deam_1"},{"dbname":"CDD","description":"nucleoside_deaminase","id":"cd01285","locations":[{"end":276,"start":155}],"match_end":276,"match_start":155,"name":"nucleoside_deaminase"},{"dbname":"PROSITE_PROFILES","description":"Cytidine and deoxycytidylate deaminases domain profile.","id":"PS51747","interpro_description":"Cytidine and deoxycytidylate deaminase domain","interpro_id":"IPR002125","interpro_name":"CMP_dCMP_dom","locations":[{"end":290,"start":149}],"match_end":290,"match_start":149,"name":"CYT_DCMP_DEAMINASES_2"},{"dbname":"SUPERFAMILY","id":"SSF53927","interpro_description":"Cytidine deaminase-like","interpro_id":"IPR016193","interpro_name":"Cytidine_deaminase-like","locations":[{"end":295,"start":126}],"match_end":295,"match_start":126,"name":"Cytidine deaminase-like"},{"dbname":"GENE3D","id":"G3DSA:3.40.140.10","locations":[{"end":304,"start":140}],"match_end":304,"match_start":140,"name":"Cytidine Deaminase, domain 2"},{"dbname":"PANTHER","id":"PTHR11079","locations":[{"end":289,"start":143}],"match_end":289,"match_start":143,"name":"CYTOSINE DEAMINASE FAMILY MEMBER"},{"dbname":"COILS","id":"Coil","locations":[{"end":72,"start":52}],"match_end":72,"match_start":52,"name":"Coil"}],"location":{"chromosome_name":"supercont5.1","end_pos":3529091,"start_pos":3528128,"strand":"reverse"},"name":"tad3","ortholog_annotations":[{"gene_uniquename":"SJAG_00352","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:25151","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00352","ortholog_taxonid":4896,"ortholog_uniquename":"SPAP27G11.04c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00352","ortholog_taxonid":4932,"ortholog_uniquename":"YLR316C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00352","ortholog_taxonid":4932,"ortholog_uniquename":"YLR316C","reference_uniquename":"PMID:26896847"}],"product":"tRNA specific adenosine-34 deaminase subunit Tad3","references_by_uniquename":{"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0030234"]}},"subset_termids":["GO:0098772","GO:0006399","GO:0030234","GO:0005829","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0002100":null,"GO:0005634":null,"GO:0005829":null,"GO:0030234":null,"GO:0052718":null,"MONDO:0014119":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00352.1"],"transcripts_by_uniquename":{"SJAG_00352.1":null},"uniprot_identifier":"B6JVE4","uniquename":"SJAG_00352"}


id: SJAG_00353
data:
  {"cv_annotations":{"biological_process":[{"annotations":[102922],"is_not":false,"summary":null,"term":"GO:1905143"},{"annotations":[59353],"is_not":false,"summary":null,"term":"GO:0006457"}],"cellular_component":[{"annotations":[102921],"is_not":false,"summary":null,"term":"GO:0005829"}],"molecular_function":[{"annotations":[102924],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[102926],"is_not":false,"summary":null,"term":"GO:0000287"},{"annotations":[102927],"is_not":false,"summary":null,"term":"GO:0044183"}]},"dbxrefs":["InterPro:IPR009772","GOA:B6JVE5","UniProtKB/TrEMBL:B6JVE5","EnsemblGenomes-Gn:SJAG_00353","EnsemblGenomes-Tr:EEB05346"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":70,"start":49}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"slm3","uniquename":"SJAG_00358"},{"name":"erv25","uniquename":"SJAG_00357"},{"name":"ppk9","uniquename":"SJAG_00356"},{"name":"osh3","uniquename":"SJAG_00355"},{"name":"mgr3","uniquename":"SJAG_00354"},{"name":"cdc123","uniquename":"SJAG_00353"},{"name":"tad3","uniquename":"SJAG_00352"},{"uniquename":"SJAG_00351"},{"name":"cnl2","uniquename":"SJAG_00350"},{"name":"alp13","uniquename":"SJAG_00349"},{"uniquename":"SJAG_00348"}],"genes_by_uniquename":{"HGNC:16827":null,"SJAG_00353":null,"SPAP27G11.03":null,"YLR215C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"D123","id":"PF07065","interpro_description":"Cell division cycle protein 123","interpro_id":"IPR009772","interpro_name":"CDC123","locations":[{"end":293,"start":16}],"match_end":293,"match_start":16,"name":"D123"},{"dbname":"PANTHER","id":"PTHR15323","interpro_description":"Cell division cycle protein 123","interpro_id":"IPR009772","interpro_name":"CDC123","locations":[{"end":310,"start":4}],"match_end":310,"match_start":4,"name":"D123 PROTEIN"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":70,"start":49}],"match_end":70,"match_start":49,"name":"disorder_prediction"},{"dbname":"MOBIDB-Negative-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Negative-Polyelectrolyte","locations":[{"end":68,"start":51}],"match_end":68,"match_start":51,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.1","end_pos":3527900,"start_pos":3526875,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":67,"start":51}}],"name":"cdc123","ortholog_annotations":[{"gene_uniquename":"SJAG_00353","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:16827","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00353","ortholog_taxonid":4896,"ortholog_uniquename":"SPAP27G11.03","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00353","ortholog_taxonid":4932,"ortholog_uniquename":"YLR215C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00353","ortholog_taxonid":4932,"ortholog_uniquename":"YLR215C","reference_uniquename":"PMID:26896847"}],"product":"translation initiation factor eIF2 assembly protein","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0000287","GO:0005524"],"not-binding":["GO:0044183"]}},"subset_termids":["GO:0051604","GO:0065003","GO:0006457","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000287":null,"GO:0005524":null,"GO:0005829":null,"GO:0006457":null,"GO:0044183":null,"GO:1905143":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00353.1"],"transcripts_by_uniquename":{"SJAG_00353.1":null},"uniprot_identifier":"B6JVE5","uniquename":"SJAG_00353"}


id: SJAG_00354
data:
  {"coiled_coil_coords":[{"range":{"end":296,"start":276}}],"cv_annotations":{"biological_process":[{"annotations":[102918],"is_not":false,"summary":null,"term":"GO:0035694"},{"annotations":[102919],"is_not":false,"summary":null,"term":"GO:0141164"}],"cellular_component":[{"annotations":[78954],"is_not":false,"summary":null,"term":"GO:0031942"}],"molecular_function":[{"annotations":[102920],"is_not":false,"summary":null,"term":"GO:0140767"},{"annotations":[78956],"is_not":false,"summary":null,"term":"GO:0051787"}],"mondo":[{"annotations":[86914],"is_not":false,"summary":null,"term":"MONDO:0014063"}]},"dbxrefs":["InterPro:IPR040201","UniProtKB/TrEMBL:B6JVE6","GOA:B6JVE6","EnsemblGenomes-Gn:SJAG_00354","InterPro:IPR011990","EnsemblGenomes-Tr:EEB05347","InterPro:IPR019734"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"gln1","uniquename":"SJAG_00359"},{"name":"slm3","uniquename":"SJAG_00358"},{"name":"erv25","uniquename":"SJAG_00357"},{"name":"ppk9","uniquename":"SJAG_00356"},{"name":"osh3","uniquename":"SJAG_00355"},{"name":"mgr3","uniquename":"SJAG_00354"},{"name":"cdc123","uniquename":"SJAG_00353"},{"name":"tad3","uniquename":"SJAG_00352"},{"uniquename":"SJAG_00351"},{"name":"cnl2","uniquename":"SJAG_00350"},{"name":"alp13","uniquename":"SJAG_00349"}],"genes_by_uniquename":{"HGNC:26006":null,"SJAG_00354":null,"SPAP27G11.02":null,"YKL133C":null,"YMR115W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Tetratricopeptide repeat","id":"PF13181","interpro_description":"Tetratricopeptide repeat","interpro_id":"IPR019734","interpro_name":"TPR_rpt","locations":[{"end":295,"start":269}],"match_end":295,"match_start":269,"name":"TPR_8"},{"dbname":"CDD","description":"Mgr3-like","id":"cd24145","locations":[{"end":315,"start":39}],"match_end":315,"match_start":39,"name":"Mgr3-like"},{"dbname":"PROSITE_PROFILES","description":"TPR repeat profile.","id":"PS50005","interpro_description":"Tetratricopeptide repeat","interpro_id":"IPR019734","interpro_name":"TPR_rpt","locations":[{"end":204,"start":171}],"match_end":204,"match_start":171,"name":"TPR"},{"dbname":"SMART","id":"SM00028","interpro_description":"Tetratricopeptide repeat","interpro_id":"IPR019734","interpro_name":"TPR_rpt","locations":[{"end":78,"start":43},{"end":204,"start":171},{"end":300,"start":267}],"match_end":300,"match_start":43,"name":"tpr_5"},{"dbname":"SUPERFAMILY","id":"SSF48452","interpro_description":"Tetratricopeptide-like helical domain superfamily","interpro_id":"IPR011990","interpro_name":"TPR-like_helical_dom_sf","locations":[{"end":208,"start":58},{"end":296,"start":244}],"match_end":296,"match_start":58,"name":"TPR-like"},{"dbname":"GENE3D","id":"G3DSA:1.25.40.10","interpro_description":"Tetratricopeptide-like helical domain superfamily","interpro_id":"IPR011990","interpro_name":"TPR-like_helical_dom_sf","locations":[{"end":300,"start":33}],"match_end":300,"match_start":33,"name":"Tetratricopeptide repeat domain"},{"dbname":"PANTHER","id":"PTHR28142","interpro_description":"Protein Mrg3-like","interpro_id":"IPR040201","interpro_name":"Mrg3-like","locations":[{"end":319,"start":3}],"match_end":319,"match_start":3,"name":"MITOCHONDRIAL INNER MEMBRANE I-AAA PROTEASE SUPERCOMPLEX SUBUNIT MGR3-RELATED"},{"dbname":"COILS","id":"Coil","locations":[{"end":296,"start":276}],"match_end":296,"match_start":276,"name":"Coil"}],"location":{"chromosome_name":"supercont5.1","end_pos":3526231,"start_pos":3525254,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":25,"start":8}}],"name":"mgr3","ortholog_annotations":[{"gene_uniquename":"SJAG_00354","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:26006","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00354","ortholog_taxonid":4896,"ortholog_uniquename":"SPAP27G11.02","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00354","ortholog_taxonid":4932,"ortholog_uniquename":"YKL133C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00354","ortholog_taxonid":4932,"ortholog_uniquename":"YMR115W","reference_uniquename":"PMID:29761456"}],"product":"mitochondrial inner membrane i-AAA protease complex TPR repeat subunit Mgr3","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0051787"],"not-binding":["GO:0140767"]}},"subset_termids":["GO:0005739","GO:0007005","GO:0030163","GO:0060090","MONDO:0004069","MONDO:0005066"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0031942":null,"GO:0035694":null,"GO:0051787":null,"GO:0140767":null,"GO:0141164":null,"MONDO:0014063":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":30,"start":12}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00354.1"],"transcripts_by_uniquename":{"SJAG_00354.1":null},"uniprot_identifier":"B6JVE6","uniquename":"SJAG_00354"}


