# terms

id: MOD:01477
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-phenylalanine residue to an 3'-fluoro-L-fluorophenylalanine.","definition_xrefs":["PubMed:8172898","PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monofluorinated L-phenylalanine","termid":"MOD:01227"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-fluoro-L-phenylalanine","synonyms":[{"name":"3-fluorophenylalanine","type":"exact"},{"name":"m-fluorophenylalanine","type":"exact"},{"name":"meta-fluorophenylalanine","type":"exact"}],"termid":"MOD:01477"}


id: PBO:0054614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2019","termid":"PBO:0054614"}


id: GO:0141123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disruption of the skin of another organism, leading to damage or temporary subversion of the skin.","definition_xrefs":["PMID:28194160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"venom-mediated disruption of anatomical structure in another organism","termid":"GO:0140138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"venom-mediated dermonecrosis in another organism","termid":"GO:0141123"}


id: PBO:0113234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Negative regulatory subunit of protein phosphatase 1 (Ppz1p); involved in coenzyme A biosynthesis; subunit of the phosphopantothenoylcysteine decarboxylase (PPCDC: Cab3p, Sis2p, Vhs3p) complex and the CoA-Synthesizing Protein Complex (CoA-SPC: Cab2p, Cab3p, Cab4p, Cab5p, Sis2p and Vhs3p); dose-dependent regulator of replicative lifespan; SIS2 has a paralog, VHS3, that arose from the whole genome duplication","termid":"PBO:0113234"}


id: PBO:0045511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DSTN pseudogene 3","termid":"PBO:0045511"}


id: GO:0002770
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular ligand binding to a receptor on the surface of a T cell capable of inhibiting an immune effector process contributing to an immune response.","definition_xrefs":["GOC:add","PMID:15258309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response-inhibiting cell surface receptor signaling pathway","termid":"GO:0002767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"T cell inhibitory signaling pathway","synonyms":[{"name":"T cell inhibitory signalling pathway","type":"exact"},{"name":"T lymphocyte inhibitory signaling pathway","type":"exact"},{"name":"T-cell inhibitory signaling pathway","type":"exact"},{"name":"T-lymphocyte inhibitory signaling pathway","type":"exact"}],"termid":"GO:0002770"}


id: GO:0019489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving methylgallate, trihydroxymethylbenzoate, the anion of methylgallic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound metabolic process","termid":"GO:0009712"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"methylgallate metabolic process","synonyms":[{"name":"methylgallate metabolism","type":"exact"}],"termid":"GO:0019489"}


id: GO:0009433
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Cytoplasmic ring located at the base of the bacterial-type flagellar basal body; acts as a rotor; includes three switch proteins, which generate torque and can change their conformational state in a bimodal fashion, so that the motor direction can switch between clockwise and counterclockwise.","definition_xrefs":["GOC:cilia","PMID:10572114","GOC:mtg_sensu","PMID:12624192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"bacterial-type flagellum basal body","termid":"GO:0009425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"bacterial-type flagellum basal body, C ring","synonyms":[{"name":"flagellar basal body, C ring","type":"exact"},{"name":"flagellin-based flagellum basal body, C ring","type":"exact"}],"termid":"GO:0009433"}


id: GO:0070918
data:
  {"annotated_genes":["SJAG_02725","SJAG_03689","SJAG_02622","SJAG_02817","SJAG_01176","SJAG_02621","SJAG_04942","SJAG_03356","SJAG_01867","SJAG_01836"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73409],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034587"},{"annotations":[119963,90191,72988,119846],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990431"},{"annotations":[93684,119989,94640],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043628"},{"annotations":[119966,72989],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990432"},{"annotations":[117847,73412,73660],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030422"}]},"cv_name":"biological_process","definition":"A process leading to the generation of a functional regulatory non-coding RNA.","definition_xrefs":["GOC:mah","PMID:19239886","PMID:15196465"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA processing","termid":"GO:0006396"},{"relation_name":"part_of","term_name":"regulatory ncRNA-mediated gene silencing","termid":"GO:0031047"}],"gene_count":10,"genes_by_uniquename":{"SJAG_01176":null,"SJAG_01836":null,"SJAG_01867":null,"SJAG_02621":null,"SJAG_02622":null,"SJAG_02725":null,"SJAG_02817":null,"SJAG_03356":null,"SJAG_03689":null,"SJAG_04942":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulatory ncRNA processing","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0031051"],"synonyms":[{"name":"gene silencing by RNA, production of guide RNA","type":"narrow"},{"name":"gene silencing by RNA, production of small RNA","type":"narrow"},{"name":"primary sncRNA processing","type":"narrow"},{"name":"production of small RNA involved in gene silencing by RNA","type":"narrow"},{"name":"small regulatory ncRNA maturation","type":"narrow"},{"name":"small regulatory ncRNA processing","type":"narrow"},{"name":"sncRNA processing","type":"narrow"},{"name":"sncRNA production","type":"narrow"}],"termid":"GO:0070918","terms_by_termid":{"GO:0030422":null,"GO:0034587":null,"GO:0043628":null,"GO:1990431":null,"GO:1990432":null}}


id: MONDO:0018221
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Immune hydrops fetalis (IHF), a form of HF, describes the excessive accumulation of fetal fluid within the fetal extravascular compartments and body cavities due to maternal rhesus (Rh) incompatibility.","definition_xrefs":["Orphanet:364013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrops fetalis","termid":"MONDO:0015193"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immune hydrops fetalis","secondary_identifiers":["MEDGEN:105328","SCTID:15539009","UMLS:C0455990","NCIT:C111904","icd11.foundation:1589938690","ICD9:773.3","GARD:21561"],"synonyms":[{"name":"IHF","type":"exact"},{"name":"immune HF","type":"exact"},{"name":"immune fetal edema","type":"exact"},{"name":"immune fetal hydrops","type":"exact"},{"name":"immune foetal hydrops","type":"exact"},{"name":"immune foetal oedema","type":"exact"}],"termid":"MONDO:0018221","xrefs":{"Monarch":{"xref_id":"0018221"}}}


id: PBO:0027771
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_error-prone_translesion_synthesis","termid":"PBO:0027771"}


id: PBO:0050518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox D3","termid":"PBO:0050518"}


id: MONDO:0010001
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ectodermal dysplasia-blindness syndrome is characterized by intellectual deficit, blindness caused by ocular malformations (microphthalmia, microcornea and sclerocornea), short stature, dysmorphic facial features (narrow nasal bridge and prominent ears), hypotrichosis, and malaligned teeth. It has been described in two siblings (brother and sister) and is likely to be transmitted as an autosomal recessive trait.","definition_xrefs":["Orphanet:1806"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005328"],"is_obsolete":false,"name":"ectodermal dysplasia-blindness syndrome","secondary_identifiers":["MEDGEN:340297","MESH:C535865","GARD:2045","OMIM:268320","UMLS:C1849332"],"synonyms":[{"name":"RODRIGUES blindness","type":"related"},{"name":"microphthalmia, microcornea, and sclerocornea with short stature and hair and dental abnormalities","type":"related"},{"name":"microphthalmos, microcornea, and sclerocornea with short stature and hair and dental abnormalities","type":"related"}],"termid":"MONDO:0010001","xrefs":{"Monarch":{"xref_id":"0010001"}}}


id: GO:0010257
data:
  {"annotated_genes":["SJAG_03782"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77151],"is_not":false,"summary":null,"term":"GO:0010257"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an NADH dehydrogenase complex.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03782":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"NADH dehydrogenase complex assembly","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0010257","terms_by_termid":{"GO:0010257":null}}


id: PBO:0067380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 482, pseudogene","termid":"PBO:0067380"}


id: GO:1905707
data:
  {"annotated_genes":["SJAG_04422"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[119870],"is_not":false,"summary":null,"term":"GO:1905707"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mitochondrial ATP synthesis coupled proton transport.","definition_xrefs":["GOC:TermGenie","PMID:15294286","PMID:12809520","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitochondrial ATP synthesis coupled proton transport","termid":"GO:1905706"},{"relation_name":"is_a","term_name":"negative regulation of ATP biosynthetic process","termid":"GO:2001170"},{"relation_name":"negatively_regulates","term_name":"proton motive force-driven mitochondrial ATP synthesis","termid":"GO:0042776"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04422":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of mitochondrial ATP synthesis coupled proton transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1905707","terms_by_termid":{"GO:1905707":null}}


id: PBO:0003831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cation diffusion family zinc membrane transporter Zrg17","termid":"PBO:0003831"}


id: MONDO:0060456
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebral sclerosis, diffuse, scholz type","secondary_identifiers":["OMIM:302700","MEDGEN:335049","MESH:C564449","UMLS:C1844884"],"synonyms":[{"name":"cerebral sclerosis, diffuse, scholz type","type":"exact"}],"termid":"MONDO:0060456","xrefs":{"Monarch":{"xref_id":"0060456"}}}


id: MOD:00881
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because Unimod entry 465 megerd with 199. Remap to MOD:00552 DiMethyl-CH2D.","definition_xrefs":["Unimod:465","PubMed:9252331"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00881 N-reductive amination-D (obsolete MOD:00881)","termid":"MOD:00881"}


id: GO:0052339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of the cell wall of a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete disruption by organism of cell wall of other organism involved in symbiotic interaction (obsolete GO:0052339)","synonyms":[{"name":"disassembly by organism of cell wall of other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052339"}


id: PBO:0090322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sec14 cytosolic factor family, phospholipid-intermembrane transfer protein Spo20/Sec14","termid":"PBO:0090322"}


id: PBO:0050920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IFITM3 pseudogene 3","termid":"PBO:0050920"}


id: MOD:01856
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks two residues by rearrangement and condensation of a cysteine with the carbonyl of the preceding residue to form a 1,3-oxazole-4-carbothionic acid.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxazole/oxazoline ring crosslinked residues","termid":"MOD:01419"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxazole/oxazoline ring crosslinked residues (Cys)","termid":"MOD:01856"}


id: PBO:0031447
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_phosphorylation_during_vegetative_growth","termid":"PBO:0031447"}


id: PBO:0083174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps ORF TRM5/YHR070W","termid":"PBO:0083174"}


id: MONDO:0013274
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the TTC8 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"},{"relation_name":"is_a","term_name":"retinal ciliopathy","termid":"MONDO:0022410"},{"relation_name":"is_a","term_name":"TTC8-related ciliopathy","termid":"MONDO:1040049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005328","MONDO:0004736"],"is_obsolete":false,"name":"retinitis pigmentosa 51","secondary_identifiers":["OMIM:613464","DOID:0110398","GARD:15665","UMLS:C3150715","MEDGEN:462065","ICD10CM:H35.5"],"synonyms":[{"name":"RP51","type":"exact"},{"name":"TTC8 retinitis pigmentosa","type":"exact"},{"name":"retinitis pigmentosa 51","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in TTC8","type":"exact"},{"name":"retinitis pigmentosa type 51","type":"exact"}],"termid":"MONDO:0013274","xrefs":{"Monarch":{"xref_id":"0013274"}}}


id: SO:0001098
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding site that, in the polypeptide molecule, interacts selectively and non-covalently with magnesium ions.","definition_xrefs":["SO:cb","EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_metal_contact","termid":"SO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_magnesium_ion_contact_site","secondary_identifiers":["BS:00187"],"synonyms":[{"name":"Mg_contact_site","type":"exact"},{"name":"polypeptide magnesium ion contact site","type":"exact"}],"termid":"SO:0001098"}


id: MONDO:0012683
data:
  {"annotated_genes":["SJAG_00653"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87098],"is_not":false,"summary":null,"term":"MONDO:0012683"}]},"cv_name":"mondo","definition":"Pontocerebellar hypoplasia type 6 (PCH6) is a rare form of pontocerebellar hypoplasia characterized clinically at birth by hypotonia, clonus, epilepsy impaired swallowing and from infancy by progressive microencephaly, spasticity and lactic acidosis.","definition_xrefs":["Orphanet:166073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"},{"relation_name":"is_a","term_name":"pontocerebellar hypoplasia","termid":"MONDO:0020135"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00653":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0020022","MONDO:0004069"],"is_obsolete":false,"name":"pontocerebellar hypoplasia type 6","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C548074","GARD:10710","MEDGEN:370596","UMLS:C1969084","icd11.foundation:1612653027","OMIM:611523","DOID:0060275","SCTID:718606005"],"synonyms":[{"name":"PCH6","type":"exact"},{"name":"RARS2 non-syndromic pontocerebellar hypoplasia","type":"exact"},{"name":"encephalopathy fatal infantile with mitochondrial respiratory chain defects","type":"related"},{"name":"encephalopathy, fatal infantile, with mitochondrial respiratory chain defects","type":"related"},{"name":"fatal infantile encephalopathy with mitochondrial respiratory chain defects","type":"exact"},{"name":"non-syndromic pontocerebellar hypoplasia caused by mutation in RARS2","type":"exact"},{"name":"pontocerebellar hypoplasia type 6","type":"exact"},{"name":"pontocerebellar hypoplasia, type 6","type":"related"}],"termid":"MONDO:0012683","terms_by_termid":{"MONDO:0012683":null},"xrefs":{"Monarch":{"xref_id":"0012683"}}}


id: MONDO:8000023
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, primary immunodeficiency. It is caused by a currently undetermined defect in the Fas-induced apoptosis pathway. No mutations in Fas, FASLG or CASP10 are detectable. Disruption of Fas-induced apoptosis impairs lymphocyte homeostasis and immune tolerance. Characteristic laboratory findings include an increase in circulating, double-negative (CD4-/CD8-) T cells in the setting of immune-mediated anemia, thrombocytopenia and neutropenia. Clinical signs present in childhood include fatigue, pallor, bruising, hepatosplenomegaly and chronic, non-malignant, non-infectious lymphadenopathy. The clinical course is influenced by a strong association with other autoimmune disorders and an increased risk for developing Hodgkin and non-Hodgkin lymphoma.","definition_xrefs":["NCIT:C39577"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune lymphoproliferative syndrome","termid":"MONDO:0017979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"type 3 autoimmune lymphoproliferative syndrome","secondary_identifiers":["MEDGEN:274327","UMLS:C1519711"],"termid":"MONDO:8000023","xrefs":{"Monarch":{"xref_id":"8000023"}}}


id: GO:1902895
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of microRNA (miRNA) gene transcription.","definition_xrefs":["GOC:dph","GOC:TermGenie","PMID:24699545","GOC:kmv","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA-templated transcription","termid":"GO:0045893"},{"relation_name":"is_a","term_name":"regulation of miRNA transcription","termid":"GO:1902893"},{"relation_name":"is_a","term_name":"positive regulation of miRNA metabolic process","termid":"GO:2000630"},{"relation_name":"positively_regulates","term_name":"miRNA transcription","termid":"GO:0061614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"}],"interesting_parent_ids":["GO:0006355","GO:0010467","GO:0006351","GO:0008150"],"is_obsolete":false,"name":"positive regulation of miRNA transcription","synonyms":[{"name":"activation of pri-miRNA transcription from RNA polymerase II promoter","type":"narrow"},{"name":"positive regulation of microRNA gene transcription","type":"exact"},{"name":"positive regulation of pri-miRNA gene transcription","type":"exact"},{"name":"positive regulation of pri-miRNA transcription by RNA polymerase II","type":"exact"},{"name":"positive regulation of pri-miRNA transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of primary miRNA gene transcription","type":"exact"},{"name":"up regulation of pri-miRNA transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of pri-miRNA transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of pri-miRNA transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1902895"}


id: GO:0061838
data:
  {"annotated_genes":["SJAG_02513","SJAG_05321","SJAG_00935","SJAG_02465"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[92589,109984,114032,119304],"is_not":false,"summary":null,"term":"GO:0061838"}]},"cv_name":"cellular_component","definition":"A histone-variant containing protein complex which forms a centromere specific nucleosome-like structure, involved in centromeric chromatin organization.","definition_xrefs":["PMID:22304917","PMID:22304909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"chromosome, centromeric region","termid":"GO:0000775"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00935":null,"SJAG_02465":null,"SJAG_02513":null,"SJAG_05321":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005694","GO:0005634"],"is_obsolete":false,"name":"CENP-T-W-S-X complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061838","terms_by_termid":{"GO:0061838":null}}


id: PBO:0080720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WSC domain containing 2","termid":"PBO:0080720"}


id: PBO:0030814
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_isocitrate_dehydrogenase_(NAD+)_activity","termid":"PBO:0030814"}


id: GO:0042905
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 9-cis-retinoic acid, a metabolically active vitamin A derivative.","definition_xrefs":["PMID:11279029","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinoic acid metabolic process","termid":"GO:0042573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"9-cis-retinoic acid metabolic process","synonyms":[{"name":"9-cis-retinoic acid metabolism","type":"exact"}],"termid":"GO:0042905"}


id: MONDO:1012403
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"contractural arachnodactyly, non-human animal","termid":"MONDO:1011800"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contractural arachnodactyly, cattle","secondary_identifiers":["OMIA:001511-9913"],"synonyms":[{"name":"Fawn calf syndrome","type":"exact"}],"termid":"MONDO:1012403","xrefs":{"Monarch":{"xref_id":"1012403"}}}


id: PBO:0065886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB34, member RAS oncogene family","termid":"PBO:0065886"}


id: FYPO:0005249
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of caesium ions than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000003","FYPO:0002682","FYPO:0000139"],"is_obsolete":false,"name":"resistance to caesium","synonyms":[{"name":"resistance to caesium during mitotic cell cycle","type":"related"},{"name":"resistance to caesium during vegetative growth","type":"exact"},{"name":"resistance to caesium ions","type":"exact"},{"name":"resistance to cesium","type":"exact"},{"name":"resistant to caesium","type":"exact"}],"termid":"FYPO:0005249"}


id: PBO:0052516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 30","termid":"PBO:0052516"}


id: PBO:0058622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6754","termid":"PBO:0058622"}


id: MONDO:0018448
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Clear cell papillary renal cell carcinoma is a rare, indolent subtype of clear cell renal carcinoma, arising from epithelial cells in the renal cortex. It most frequently manifests with a well-circumscribed, well-encapsulated, unicentric, unilateral, small tumor that typically does not metastasize. Clinically it can present with flank or abdominal pain or hematuria, although most patients are usually asymptomatic at the time of diagnosis. Bilateral and/or multifocal presentation should raise the suspicion of von Hippel-Lindau syndrome.","definition_xrefs":["Orphanet:404511"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nonpapillary renal cell carcinoma","termid":"MONDO:0007763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005240"],"is_obsolete":false,"name":"clear cell papillary renal cell carcinoma","secondary_identifiers":["UMLS:C4518333","GARD:21721","MEDGEN:1388623","NCIT:C121955","ONCOTREE:CCPRC","SCTID:734015000"],"termid":"MONDO:0018448","xrefs":{"Monarch":{"xref_id":"0018448"}}}


id: GO:0021619
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the hypoglossal nerve to attain its fully functional state. This motor nerve innervates all the intrinsic and all but one of the extrinsic muscles of the tongue.","definition_xrefs":["GOC:dgh","GOC:jid","ISBN:0838580343","GOC:cls","GO_REF:0000021","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve maturation","termid":"GO:0021605"},{"relation_name":"part_of","term_name":"hypoglossal nerve development","termid":"GO:0021566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hypoglossal nerve maturation","synonyms":[{"name":"CN XII maturation","type":"related"}],"termid":"GO:0021619"}


id: GO:0050676
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of urothelial cell proliferation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of urothelial cell proliferation","termid":"GO:0050675"},{"relation_name":"is_a","term_name":"negative regulation of epithelial cell proliferation","termid":"GO:0050680"},{"relation_name":"negatively_regulates","term_name":"urothelial cell proliferation","termid":"GO:0050674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of urothelial cell proliferation","synonyms":[{"name":"down regulation of urothelial cell proliferation","type":"exact"},{"name":"down-regulation of urothelial cell proliferation","type":"exact"},{"name":"downregulation of urothelial cell proliferation","type":"exact"},{"name":"inhibition of urothelial cell proliferation","type":"narrow"}],"termid":"GO:0050676"}


id: PBO:0029924
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-ergosterol_absent_from_cell","termid":"PBO:0029924"}


id: PBO:0059344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S10 pseudogene 5","termid":"PBO:0059344"}


id: PBO:0069965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1260, pseudogene","termid":"PBO:0069965"}


id: MONDO:1012697
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any demyelinating disease that occurs in calves of the Limousin breed of cattle and is characterized by progressively severe forelimb hypermetria, blindness, behavioural abnormalities and multifocal white matter vacuolation and demyelination.","definition_xrefs":["PMID:2375709"],"direct_ancestors":[{"relation_name":"is_a","term_name":"demyelinating disease, non-human animal","termid":"MONDO:1012987"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"demyelinating disorder, Limousin cattle","secondary_identifiers":["OMIA:001489-9913"],"termid":"MONDO:1012697","xrefs":{"Monarch":{"xref_id":"1012697"}}}


id: PBO:0087944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translation initiation factor eIF1; component of complex involved in recognition of initiator codon; modulates translation accuracy at initiation phase by discriminating against suboptimal initiation sites to prevent excessive uORF translation genome-wide","termid":"PBO:0087944"}


id: GO:1904883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of telomerase catalytic core complex assembly.","definition_xrefs":["PMID:26586433","GOC:BHF_telomere","GO_REF:0000058","GOC:TermGenie","GOC:BHF","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of telomerase catalytic core complex assembly","termid":"GO:1904882"},{"relation_name":"negatively_regulates","term_name":"telomerase catalytic core complex assembly","termid":"GO:1904868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"negative regulation of telomerase catalytic core complex assembly","synonyms":[{"name":"down regulation of TERT-TERC complex assembly","type":"related"},{"name":"down regulation of TERT-TERC complex formation","type":"related"},{"name":"down regulation of telomerase catalytic core complex assembly","type":"exact"},{"name":"down regulation of telomerase catalytic core complex formation","type":"exact"},{"name":"down-regulation of TERT-TERC complex assembly","type":"related"},{"name":"down-regulation of TERT-TERC complex formation","type":"related"},{"name":"down-regulation of telomerase catalytic core complex assembly","type":"exact"},{"name":"down-regulation of telomerase catalytic core complex formation","type":"exact"},{"name":"downregulation of TERT-TERC complex assembly","type":"related"},{"name":"downregulation of TERT-TERC complex formation","type":"related"},{"name":"downregulation of telomerase catalytic core complex assembly","type":"exact"},{"name":"downregulation of telomerase catalytic core complex formation","type":"exact"},{"name":"inhibition of TERT-TERC complex assembly","type":"related"},{"name":"inhibition of TERT-TERC complex formation","type":"related"},{"name":"inhibition of telomerase catalytic core complex assembly","type":"narrow"},{"name":"inhibition of telomerase catalytic core complex formation","type":"narrow"},{"name":"negative regulation of TERT-TERC complex assembly","type":"related"},{"name":"negative regulation of TERT-TERC complex formation","type":"related"},{"name":"negative regulation of telomerase catalytic core complex formation","type":"exact"}],"termid":"GO:1904883"}


id: PBO:0086365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative alpha-1,2-mannosyltransferase; involved in O- and N-linked protein glycosylation; member of the KRE2/MNT1 mannosyltransferase family; Svp26p mediates uptake of Ktr3p into COPII vesicles; relocalizes from nucleus to vacuole upon DNA replication stress","termid":"PBO:0086365"}


id: MOD:00676
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively adds oxygen atoms to a residue with or without the removal of hydrogen atoms.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidized residue","termid":"MOD:00675"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxygenated residue","synonyms":[{"name":"OxyRes","type":"exact"}],"termid":"MOD:00676"}


id: GO:0120025
data:
  {"annotated_genes":["SJAG_04887","SJAG_03357","SJAG_01732","SJAG_04100","SJAG_02718","SJAG_03145","SJAG_02222","SJAG_00677","SJAG_00938","SJAG_03444","SJAG_05001","SJAG_04470","SJAG_01215","SJAG_03453","SJAG_00667","SJAG_03011","SJAG_04723","SJAG_00279","SJAG_04781","SJAG_01794","SJAG_04703","SJAG_02228","SJAG_04901","SJAG_02924","SJAG_01978","SJAG_05285","SJAG_04509","SJAG_00663","SJAG_00185","SJAG_01171","SJAG_01888","SJAG_03688","SJAG_03646","SJAG_01769","SJAG_01017","SJAG_00700","SJAG_01993","SJAG_04001","SJAG_00514","SJAG_03596","SJAG_02700","SJAG_00870","SJAG_02351","SJAG_02169","SJAG_01943","SJAG_02989","SJAG_02486","SJAG_02379","SJAG_04982"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[113217],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005937"},{"annotations":[109966,92652,116481,103761,103762,109905,95828,121516,97182,90906,101366,94323,113168,90089,101968,118033,95634],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990819"},{"annotations":[100793,89951],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070250"},{"annotations":[101931,117827,107839,96313],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032175"},{"annotations":[94396,108993,99728,99534,89700,73922,98677,77309,75691,108692,80454,116181,92482,117674,92528,110899,105072,78058,71883,100709,107932,79530,110689],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043332"},{"annotations":[98190,112041],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070867"},{"annotations":[81321],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005902"}]},"cv_name":"cellular_component","definition":"A prolongation or process extending from a cell and that is bounded by plasma membrane, e.g. a cilium, lamellipodium, or axon.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection","termid":"GO:0042995"}],"gene_count":49,"genes_by_uniquename":{"SJAG_00185":null,"SJAG_00279":null,"SJAG_00514":null,"SJAG_00663":null,"SJAG_00667":null,"SJAG_00677":null,"SJAG_00700":null,"SJAG_00870":null,"SJAG_00938":null,"SJAG_01017":null,"SJAG_01171":null,"SJAG_01215":null,"SJAG_01732":null,"SJAG_01769":null,"SJAG_01794":null,"SJAG_01888":null,"SJAG_01943":null,"SJAG_01978":null,"SJAG_01993":null,"SJAG_02169":null,"SJAG_02222":null,"SJAG_02228":null,"SJAG_02351":null,"SJAG_02379":null,"SJAG_02486":null,"SJAG_02700":null,"SJAG_02718":null,"SJAG_02924":null,"SJAG_02989":null,"SJAG_03011":null,"SJAG_03145":null,"SJAG_03357":null,"SJAG_03444":null,"SJAG_03453":null,"SJAG_03596":null,"SJAG_03646":null,"SJAG_03688":null,"SJAG_04001":null,"SJAG_04100":null,"SJAG_04470":null,"SJAG_04509":null,"SJAG_04703":null,"SJAG_04723":null,"SJAG_04781":null,"SJAG_04887":null,"SJAG_04901":null,"SJAG_04982":null,"SJAG_05001":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"plasma membrane bounded cell projection","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:36148799":null},"termid":"GO:0120025","terms_by_termid":{"GO:0005902":null,"GO:0005937":null,"GO:0032175":null,"GO:0043332":null,"GO:0070250":null,"GO:0070867":null,"GO:1990819":null}}


id: PBO:0044099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 47 member A7","termid":"PBO:0044099"}


id: GO:0050584
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: linoleate + O2 = (9Z,11S,12Z)-11-hydroperoxyoctadeca-9,12-dienoate.","definition_xrefs":["EC:1.13.11.45","RHEA:18993"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"linoleate 11-lipoxygenase activity","secondary_identifiers":["KEGG_REACTION:R05718","MetaCyc:1.13.11.45-RXN"],"synonyms":[{"name":"linoleate dioxygenase activity","type":"related"},{"name":"linoleate:oxygen 11S-oxidoreductase activity","type":"related"},{"name":"manganese lipoxygenase activity","type":"related"}],"termid":"GO:0050584"}


id: PATO:0001465
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A malformed quality inhering in a bearer by virtue of the bearer's all-encompassing, grotesque morphological defects.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malformed","termid":"PATO:0000646"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monstrous","termid":"PATO:0001465"}


id: GO:0048444
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the floral organ are generated and organized.","definition_xrefs":["PO:0025395","GOC:PO_curators","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"post-embryonic plant organ morphogenesis","termid":"GO:0090697"},{"relation_name":"part_of","term_name":"floral organ development","termid":"GO:0048437"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"floral organ morphogenesis","secondary_identifiers":["GO:0048434"],"termid":"GO:0048444"}


id: FYPO:0005968
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of sodium chloride than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0002682","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"resistance to sodium chloride","synonyms":[{"name":"resistance to NaCl","type":"exact"},{"name":"resistance to sodium chloride during mitotic cell cycle","type":"related"},{"name":"resistance to sodium chloride during vegetative growth","type":"exact"},{"name":"resistant to sodium chloride","type":"exact"}],"termid":"FYPO:0005968"}


id: GO:1902019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cilium-dependent cell motility.","definition_xrefs":["GOC:TermGenie","GOC:cilia","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell motility","termid":"GO:2000145"},{"relation_name":"regulates","term_name":"cilium-dependent cell motility","termid":"GO:0060285"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cilium-dependent cell motility","synonyms":[{"name":"regulation of ciliary cell motility","type":"related"},{"name":"regulation of cilium cell motility","type":"exact"}],"termid":"GO:1902019"}


id: GO:2000809
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of synaptic vesicle clustering.","definition_xrefs":["PMID:21513708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of synaptic vesicle clustering","termid":"GO:2000807"},{"relation_name":"positively_regulates","term_name":"synaptic vesicle clustering","termid":"GO:0097091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of synaptic vesicle clustering","termid":"GO:2000809"}


id: PBO:0073684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sirtuin 6","termid":"PBO:0073684"}


id: PBO:0062587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily H member 2","termid":"PBO:0062587"}


id: GO:0016556
data:
  {"annotated_genes":["SJAG_00088","SJAG_04065","SJAG_04754","SJAG_02978","SJAG_00319"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[82037,77387,80228,74692,72416],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990481"}]},"cv_name":"biological_process","definition":"The covalent alteration of one or more nucleotides within an mRNA molecule to produce an mRNA molecule with a sequence that differs from that coded genetically.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA modification","termid":"GO:0009451"},{"relation_name":"is_a","term_name":"mRNA metabolic process","termid":"GO:0016071"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00088":null,"SJAG_00319":null,"SJAG_02978":null,"SJAG_04065":null,"SJAG_04754":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0008150","GO:0016071"],"is_obsolete":false,"name":"mRNA modification","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-75072","GO:0006381"],"synonyms":[{"name":"mRNA editing","type":"narrow"}],"termid":"GO:0016556","terms_by_termid":{"GO:1990481":null}}


id: GO:0098032
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A fiber attached to the collar structure of some icosahedral viral capsids.","definition_xrefs":["GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral capsid, fiber","termid":"GO:0098022"},{"relation_name":"part_of","term_name":"icosahedral viral capsid, collar","termid":"GO:0098031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"icosahedral viral capsid, collar fiber","termid":"GO:0098032"}


id: GO:0003346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a cell that have undergone an epithelial to mesenchymal transition from the epicardium into the myocardium.","definition_xrefs":["PMID:18722343","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration involved in heart development","termid":"GO:0060973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epicardium-derived cell migration to the myocardium","termid":"GO:0003346"}


id: GO:0140711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of a Frizzled Nuclear Import pathway.","definition_xrefs":["PMID:22579286","PMID:22510459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Frizzled Nuclear Import pathway","termid":"GO:0140710"},{"relation_name":"is_a","term_name":"positive regulation of non-canonical Wnt signaling pathway","termid":"GO:2000052"},{"relation_name":"positively_regulates","term_name":"Frizzled Nuclear Import pathway","termid":"GO:0140709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of Frizzled Nuclear Import pathway","synonyms":[{"name":"positive regulation of FNI","type":"broad"},{"name":"positive regulation of Frizzled Nuclear Import Wnt Pathway","type":"exact"}],"termid":"GO:0140711"}


id: PBO:0000609
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein Phosphatase 2C homolog","termid":"PBO:0000609"}


id: GO:0006862
data:
  {"annotated_genes":["SJAG_00612","SJAG_04328","SJAG_00760","SJAG_02050","SJAG_00154","SJAG_03334","SJAG_03503"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76454],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015866"},{"annotations":[64693],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903790"},{"annotations":[103182],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990554"},{"annotations":[103183],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990553"},{"annotations":[59189],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140021"},{"annotations":[104679,59188],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990544"},{"annotations":[109397],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990548"},{"annotations":[94719],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990549"},{"annotations":[80937],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990519"}]},"cv_name":"biological_process","definition":"The directed movement of a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate, into, out of or within a cell.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organophosphate ester transport","termid":"GO:0015748"},{"relation_name":"is_a","term_name":"nucleobase-containing compound transport","termid":"GO:0015931"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00154":null,"SJAG_00612":null,"SJAG_00760":null,"SJAG_02050":null,"SJAG_03334":null,"SJAG_03503":null,"SJAG_04328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"nucleotide transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0006862","terms_by_termid":{"GO:0015866":null,"GO:0140021":null,"GO:1903790":null,"GO:1990519":null,"GO:1990544":null,"GO:1990548":null,"GO:1990549":null,"GO:1990553":null,"GO:1990554":null}}


id: GO:0051274
data:
  {"annotated_genes":["SJAG_01787","SJAG_04073","SJAG_01290","SJAG_01453","SJAG_04483","SJAG_01835","SJAG_02446","SJAG_05285","SJAG_00218","SJAG_02222","SJAG_04771","SJAG_04666","SJAG_04668","SJAG_00610","SJAG_03587","SJAG_01288","SJAG_03123","SJAG_00876","SJAG_04509","SJAG_04462","SJAG_01255","SJAG_03705","SJAG_04659","SJAG_02590"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76920,78547,64310],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006078"},{"annotations":[96278],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[74739],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034412"},{"annotations":[117681,72800,74742,76257,77603,93414,107935,115022],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071970"},{"annotations":[104464,79965],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070880"},{"annotations":[89326,94234],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0140748"},{"annotations":[89710],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032951"},{"annotations":[107174,94218,69409,107745,119771,119904,92583],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090334"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of beta-glucans.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucan biosynthetic process","termid":"GO:0009250"},{"relation_name":"is_a","term_name":"beta-glucan metabolic process","termid":"GO:0051273"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00218":null,"SJAG_00610":null,"SJAG_00876":null,"SJAG_01255":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01453":null,"SJAG_01787":null,"SJAG_01835":null,"SJAG_02222":null,"SJAG_02446":null,"SJAG_02590":null,"SJAG_03123":null,"SJAG_03587":null,"SJAG_03705":null,"SJAG_04073":null,"SJAG_04462":null,"SJAG_04483":null,"SJAG_04509":null,"SJAG_04659":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"beta-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"beta-glucan anabolism","type":"exact"},{"name":"beta-glucan biosynthesis","type":"exact"},{"name":"beta-glucan formation","type":"exact"},{"name":"beta-glucan synthesis","type":"exact"}],"termid":"GO:0051274","terms_by_termid":{"GO:0006078":null,"GO:0032951":null,"GO:0034412":null,"GO:0034413":null,"GO:0070880":null,"GO:0071970":null,"GO:0090334":null,"GO:0140748":null}}


id: PBO:0071330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27 pseudogene 7","termid":"PBO:0071330"}


id: GO:0030476
data:
  {"annotated_genes":["SJAG_03013","SJAG_04868","SJAG_00974","SJAG_01321"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90026,90515,92061,93588],"is_not":false,"summary":null,"term":"GO:0030476"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an ascospore wall. During sporulation in Ascomycota, each ascospore nucleus becomes surrounded by a specialized spore wall, formed by deposition of spore wall components in the lumenal space between the outer and inner leaflets of the prospore membrane. An example of this process is found in Saccharomyces cerevisiae.","definition_xrefs":["GOC:mcc","PMID:14702385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"spore wall assembly","termid":"GO:0042244"},{"relation_name":"is_a","term_name":"fungal-type cell wall assembly","termid":"GO:0071940"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"ascospore wall biogenesis","termid":"GO:0070591"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00974":null,"SJAG_01321":null,"SJAG_03013":null,"SJAG_04868":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0030437"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0030437","GO:0044085","GO:0007049","GO:0071554","GO:0008150"],"is_obsolete":false,"name":"ascospore wall assembly","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0007152"],"synonyms":[{"name":"spore wall assembly","type":"broad"}],"termid":"GO:0030476","terms_by_termid":{"GO:0030476":null}}


id: GO:0046727
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any of the protein subunits that comprise the closed shell or coat (capsid) of certain viruses.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion component","termid":"GO:0044423"},{"relation_name":"part_of","term_name":"viral capsid","termid":"GO:0019028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"capsomere","secondary_identifiers":["Wikipedia:Capsomere"],"synonyms":[{"name":"capsomer","type":"exact"}],"termid":"GO:0046727"}


id: PR:Q0E7J8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rev7 gene.","definition_xrefs":["UniProtKB:Q0E7J8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase zeta processivity subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC12D12.09","synonyms":[{"name":"Spom972h-rev7","type":"exact"},{"name":"revertibility protein 7 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q0E7J8"}


id: GO:0018682
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: atrazine + O2 + 2 H+ = deethylatrazine + acetaldehyde + H2O.","definition_xrefs":["UM-BBD_reactionID:r0127"],"gene_count":0,"genotype_count":0,"name":"obsolete atrazine N-dealkylase activity (obsolete GO:0018682)","synonyms":[{"name":"atrazine monooxygenase activity","type":"related"}],"termid":"GO:0018682"}


id: PBO:0041786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAPSL divergent transcript","termid":"PBO:0041786"}


id: PR:O59814
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC794.04c gene.","definition_xrefs":["UniProtKB:O59814","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C794.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC794.04c","synonyms":[{"name":"Spom972h-SPCC794.04c","type":"exact"}],"termid":"PR:O59814"}


id: PBO:0013231
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"curator_email","termid":"PBO:0013231"}


id: GO:0103062
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP(4-) + H2O + a cis-keto-C60-meroacyl-[acp] = diphosphoric acid + a cis-keto-meroacyl-adenylate + a holo-[acyl-carrier protein].","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete cis-keto-C60-meroacyl-AMP ligase activity (obsolete GO:0103062)","termid":"GO:0103062"}


id: PATO:0000903
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000903 cms-hl type value (obsolete PATO:0000903)","termid":"PATO:0000903"}


id: CHEBI:84327
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"torin 1","termid":"CHEBI:84327"}


id: GO:0050808
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell).","definition_xrefs":["GOC:pr","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell junction organization","termid":"GO:0034330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"synapse organization","synonyms":[{"name":"synapse development","type":"related"},{"name":"synapse morphogenesis","type":"related"},{"name":"synapse organisation","type":"exact"},{"name":"synapse organization and biogenesis","type":"related"}],"termid":"GO:0050808"}


id: PBO:0057078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 181a-1","termid":"PBO:0057078"}


id: GO:1905685
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of plasma membrane repair.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:bhm","PMID:22940583"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"negative regulation of wound healing","termid":"GO:0061045"},{"relation_name":"is_a","term_name":"regulation of plasma membrane repair","termid":"GO:1905684"},{"relation_name":"negatively_regulates","term_name":"plasma membrane repair","termid":"GO:0001778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"negative regulation of plasma membrane repair","synonyms":[{"name":"down regulation of plasma membrane repair","type":"exact"},{"name":"down-regulation of plasma membrane repair","type":"exact"},{"name":"downregulation of plasma membrane repair","type":"exact"},{"name":"inhibition of plasma membrane repair","type":"narrow"}],"termid":"GO:1905685"}


id: GO:1990504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The secretion of molecules (e.g. neuropeptides, insulin-related peptides or neuromodulators such as serotonin and dopamine) contained within a membrane-bounced dense core granule by fusion of the granule with the plasma membrane of a cell in response to increased cytosolic calcium levels.","definition_xrefs":["PMID:24653208","GOC:kmv","PMID:17553987"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium-ion regulated exocytosis","termid":"GO:0017156"},{"relation_name":"is_a","term_name":"dense core granule localization","termid":"GO:0032253"},{"relation_name":"is_a","term_name":"establishment of vesicle localization","termid":"GO:0051650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"dense core granule exocytosis","synonyms":[{"name":"dense core vesicle exocytosis","type":"exact"}],"termid":"GO:1990504"}


id: PBO:0039549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD44 divergent transcript","termid":"PBO:0039549"}


id: PBO:0089760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA recombination mediator, RecA family ATPase Rad55/Rhp55","termid":"PBO:0089760"}


id: PBO:0045862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EEF1A lysine methyltransferase 1","termid":"PBO:0045862"}


id: PBO:0062660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 13 subfamily D member 1","termid":"PBO:0062660"}


id: MONDO:0016556
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"transient congenital hypothyroidism","termid":"MONDO:0015792"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient congenital hypothyroidism due to neonatal factor","secondary_identifiers":["UMLS:C5680930","Orphanet:238699","MEDGEN:1842815","GARD:20646"],"termid":"MONDO:0016556","xrefs":{"Monarch":{"xref_id":"0016556"}}}


id: PBO:0031641
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_shmoo_formation","termid":"PBO:0031641"}


id: MONDO:0958241
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial hypertrophic cardiomyopathy","termid":"MONDO:0024573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"cardiomyopathy, familial hypertrophic, 30, atrial","secondary_identifiers":["OMIM:620734","UMLS:C5935586","MEDGEN:1858408"],"termid":"MONDO:0958241","xrefs":{"Monarch":{"xref_id":"0958241"}}}


id: MONDO:0015766
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cholera is an infectious disease, caused by intestinal infection with Vibrio cholerae, characterized by massive watery diarrhea and severe dehydration that can lead to shock and death if left untreated.","definition_xrefs":["Orphanet:173"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary bacterial infectious disease","termid":"MONDO:0000314"},{"relation_name":"is_a","term_name":"intestinal infectious disease","termid":"MONDO:0000916"},{"relation_name":"is_a","term_name":"vibrio infectious disease","termid":"MONDO:0007014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"cholera","secondary_identifiers":["DOID:1498","MEDGEN:40263","NCIT:C157812","UMLS:C0008354","ICD10CM:A00","icd11.foundation:257068234","ICD9:001.9","ICD9:001","GARD:6043","MedDRA:10008631","ICD9:001.0","SCTID:63650001","MESH:D002771","NORD:928"],"synonyms":[{"name":"Vibrio cholerae","type":"exact"},{"name":"Vibrio cholerae caused disease or disorder","type":"exact"},{"name":"Vibrio cholerae disease or disorder","type":"exact"},{"name":"Vibrio cholerae infection","type":"related"},{"name":"Vibrio cholerae infectious disease","type":"exact"},{"name":"cholera - Vibrio cholerae","type":"exact"},{"name":"cholera due to Vibrio cholerae","type":"exact"}],"termid":"MONDO:0015766","xrefs":{"Monarch":{"xref_id":"0015766"}}}


id: MONDO:0023171
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Foix-Chavany-Marie syndrome (FCMS) is a cortico-subcortical suprabulbar or pseudobulbar palsy of the lower cranial nerves, characterized by severe dysarthria and dysphagia associated with bilateral central facio-pharyngo-glosso-masticatory paralysis, with prominent automatic-voluntary dissociation in which involuntary movements of the affected muscles are preserved.","definition_xrefs":["Orphanet:2048"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple cranial nerve palsy","termid":"MONDO:0001819"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"foix chavany Marie syndrome","secondary_identifiers":["MESH:C537069","SCTID:720956003","UMLS:C2931412","GARD:2351","MEDGEN:419406"],"synonyms":[{"name":"anterior opercular syndrome","type":"related"},{"name":"bilateral anterior opercular syndrome","type":"related"},{"name":"congenital Foix-Chavany-Marie syndrome","type":"related"},{"name":"congenital Foix-Chavany-Marie syndrome (subtype)","type":"related"},{"name":"facio-Labio-pharyngo-Glosso-laryngo-brachial paralysis","type":"related"},{"name":"facio-pharyngo-glossal diplegia with automatic-voluntary movement dissociation","type":"related"},{"name":"facio-pharyngo-glosso-masticatory diplegia","type":"related"},{"name":"foix chavany Marie syndrome","type":"exact"},{"name":"opercular syndrome, anterior","type":"related"},{"name":"pseudobulbar paralysis, cortical type","type":"related"}],"termid":"MONDO:0023171","xrefs":{"Monarch":{"xref_id":"0023171"}}}


id: PATO:0001803
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A photosensitivity quality inhering in a bearer by virtue of the bearer's disposition to being susceptible to damage by light.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photosensitivity","termid":"PATO:0000927"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phototoxic","termid":"PATO:0001803"}


id: MONDO:1011874
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"degenerative neuromuscular disease, non-human animal","secondary_identifiers":["OMIA:001351"],"termid":"MONDO:1011874","xrefs":{"Monarch":{"xref_id":"1011874"}}}


id: PBO:0062083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 14 pseudogene","termid":"PBO:0062083"}


id: MONDO:0044618
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete CLCN4-related X-linked intellectual disability syndrome (obsolete MONDO:0044618)","termid":"MONDO:0044618","xrefs":{"Monarch":{"xref_id":"0044618"}}}


id: PBO:0087530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of NuA4 histone H4 acetyltransferase and SWR1 complexes; may function to antagonize silencing near telomeres; interacts directly with Swc4p; has homology to human leukemogenic protein AF9; contains a YEATS domain","termid":"PBO:0087530"}


id: PR:P36627
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cellular nucleic acid-binding protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00927","PANTHER:PTHR23002:SF11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cellular nucleic acid-binding protein homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13D6.02c","secondary_identifiers":["UniProtKB:P36627"],"synonyms":[{"name":"Spom972h-CNBP","type":"exact"}],"termid":"PR:P36627"}


id: PBO:0083832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ethanolamine-phosphate cytidylyltransferase; catalyzes the second step of phosphatidylethanolamine biosynthesis; involved in the maintenance of plasma membrane; similar to mammalian CTP: phosphocholine cytidylyl-transferases; inability of the null mutant to synthesize phosphatidylethanolamine and phosphatidylcholine from ethanolamine is functionally complemented by human PCYT2","termid":"PBO:0083832"}


id: _global:absent_during
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD_extension_relations","definition":"Identifies a biological phase or process during which the modification is not observed, where it is not known whether the modification was removed during the indicated phase or process (if this is known use the removed_during relation), or during a preceding phase or process.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"absent_during","termid":"_global:absent_during"}


id: GO:0090462
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of orthinine within a cell.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular amino acid homeostasis","termid":"GO:0080144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular ornithine homeostasis","synonyms":[{"name":"cellular ornithine homeostasis","type":"exact"},{"name":"ornithine homeostasis","type":"exact"}],"termid":"GO:0090462"}


id: GO:0046852
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of bone remodeling.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of tissue remodeling","termid":"GO:0034105"},{"relation_name":"is_a","term_name":"regulation of bone remodeling","termid":"GO:0046850"},{"relation_name":"positively_regulates","term_name":"bone remodeling","termid":"GO:0046849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of bone remodeling","synonyms":[{"name":"activation of bone remodeling","type":"narrow"},{"name":"positive regulation of bone remodelling","type":"exact"},{"name":"stimulation of bone remodeling","type":"narrow"},{"name":"up regulation of bone remodeling","type":"exact"},{"name":"up-regulation of bone remodeling","type":"exact"},{"name":"upregulation of bone remodeling","type":"exact"}],"termid":"GO:0046852"}


id: MONDO:1011430
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neuronal ceroid lipofuscinosis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal storage disease, non-human animal","termid":"MONDO:1010171"},{"relation_name":"is_a","term_name":"neurodegenerative disease, non-human animal","termid":"MONDO:1012953"},{"relation_name":"is_a","term_name":"hereditary neurological disease, non-human animal","termid":"MONDO:1012972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal ceroid lipofuscinosis, non-human animal","secondary_identifiers":["OMIA:000181"],"termid":"MONDO:1011430","xrefs":{"Monarch":{"xref_id":"1011430"}}}


id: PBO:0079716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin protein ligase E3 component n-recognin 3","termid":"PBO:0079716"}


id: MONDO:0009718
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition characterized by severe hypothyroidism that is caused by autoimmune thyroid gland disorders, surgical reduction of thyroid tissue, radiation exposure, and viral infections. Signs and symptoms include generalized fatigue, lethargy, increased body weight, pale, edematous and thickened skin, low blood pressure, constipation and cold intolerance.","definition_xrefs":["NCIT:C34834"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypothyroidism","termid":"MONDO:0005420"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myxedema","secondary_identifiers":["EFO:1001055","MESH:D009230","DOID:11634","OMIM:255900","UMLS:C0027145","MEDGEN:6506","SCTID:43153006","MedDRA:10028663"],"synonyms":[{"name":"myxedema","type":"exact"}],"termid":"MONDO:0009718","xrefs":{"Monarch":{"xref_id":"0009718"}}}


id: PBO:0064619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 6 homeobox 1","termid":"PBO:0064619"}


id: MONDO:1011885
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"episodic falling, non-human animal","secondary_identifiers":["OMIA:001592"],"termid":"MONDO:1011885","xrefs":{"Monarch":{"xref_id":"1011885"}}}


id: PBO:0087981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase; 5-methylates the uridine residue at position 54 of tRNAs and may also have a role in tRNA stabilization or maturation; endo-exonuclease with a role in DNA repair","termid":"PBO:0087981"}


id: PBO:0063232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin 18","termid":"PBO:0063232"}


id: GO:1904963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phytol biosynthetic process.","definition_xrefs":["GOC:TermGenie","PMID:24275650","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of isoprenoid metabolic process","termid":"GO:0019747"},{"relation_name":"is_a","term_name":"regulation of lipid biosynthetic process","termid":"GO:0046890"},{"relation_name":"is_a","term_name":"regulation of alcohol biosynthetic process","termid":"GO:1902930"},{"relation_name":"regulates","term_name":"phytol biosynthetic process","termid":"GO:0033520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of phytol biosynthetic process","synonyms":[{"name":"regulation of phytol anabolism","type":"exact"},{"name":"regulation of phytol biosynthesis","type":"exact"},{"name":"regulation of phytol formation","type":"exact"},{"name":"regulation of phytol synthesis","type":"exact"}],"termid":"GO:1904963"}


id: PBO:0078556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 44","termid":"PBO:0078556"}


id: GO:0008820
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: adenosylcobinamide phosphate + GTP + 2 H+ = adenosylcobinamide-GDP + diphosphate.","definition_xrefs":["RHEA:22712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanylyltransferase activity","termid":"GO:0070568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016779"],"is_obsolete":false,"name":"cobinamide phosphate guanylyltransferase activity","secondary_identifiers":["MetaCyc:COBINPGUANYLYLTRANS-RXN","EC:2.7.7.62","GO:0043753","KEGG_REACTION:R05222"],"synonyms":[{"name":"AdoCbi kinase/AdoCbi-phosphate guanylyltransferase","type":"broad"},{"name":"CobU","type":"related"},{"name":"GTP:adenosylcobinamide-phosphate guanylyltransferase activity","type":"exact"},{"name":"GTP:cobinamide phosphate guanylyltransferase activity","type":"exact"},{"name":"adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase","type":"broad"},{"name":"adenosylcobinamide-phosphate guanylyltransferase activity","type":"exact"}],"termid":"GO:0008820"}


id: MONDO:0012352
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vasculitis, lymphocytic, cutaneous small vessel","secondary_identifiers":["MESH:C565222","MEDGEN:344012","OMIM:609817","UMLS:C1853293"],"synonyms":[{"name":"vasculitis, lymphocytic, cutaneous small vessel","type":"exact"}],"termid":"MONDO:0012352","xrefs":{"Monarch":{"xref_id":"0012352"}}}


id: MONDO:0014406
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any pancreatic agenesis in which the cause of the disease is a mutation in the PTF1A gene.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pancreatic agenesis","termid":"MONDO:0009832"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pancreatic agenesis 2","secondary_identifiers":["GARD:16033","UMLS:C4014737","OMIM:615935","MEDGEN:863174"],"synonyms":[{"name":"PAGEN2","type":"related"},{"name":"PTF1A pancreatic agenesis","type":"exact"},{"name":"pancreatic agenesis 2","type":"exact"},{"name":"pancreatic agenesis caused by mutation in PTF1A","type":"exact"},{"name":"pancreatic agenesis type 2","type":"exact"},{"name":"pancreatic hypoplasia, congenital 2","type":"related"}],"termid":"MONDO:0014406","xrefs":{"Monarch":{"xref_id":"0014406"}}}


id: GO:1905369
data:
  {"annotated_genes":["SJAG_04888","SJAG_03151","SJAG_04641","SJAG_04088","SJAG_02502","SJAG_01489","SJAG_00738","SJAG_04484","SJAG_03321","SJAG_01014","SJAG_04357","SJAG_04969","SJAG_00846","SJAG_03648","SJAG_02562","SJAG_04306","SJAG_03672","SJAG_01652","SJAG_01203","SJAG_00808","SJAG_01750","SJAG_02900","SJAG_00778","SJAG_02341","SJAG_00762","SJAG_01544","SJAG_05278","SJAG_03737","SJAG_03638","SJAG_00766","SJAG_02809","SJAG_02397","SJAG_05316","SJAG_04229","SJAG_00712","SJAG_01131","SJAG_03408","SJAG_04572","SJAG_02992","SJAG_04211","SJAG_02542","SJAG_02867","SJAG_03261","SJAG_04477","SJAG_00128","SJAG_02776","SJAG_03292","SJAG_04144","SJAG_00460","SJAG_04541"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72552,76288,72312,77092,76290],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042765"},{"annotations":[81709,78574],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042720"},{"annotations":[107408,115046],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017087"},{"annotations":[112180],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000502"},{"annotations":[71543,73653,76899,77303,74250,74787,80143],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0019773"},{"annotations":[57546,61897,62386,64470,65359,71170,57354],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0019774"},{"annotations":[78642,81313,79862,79747,80192,75445,80929,74869,81596],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0008540"},{"annotations":[100764,78205,72994,74518,81240,117016,70517,79900,75989,63275,62007,75962],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0008541"},{"annotations":[105099,119439],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990520"},{"annotations":[75644,66921,69370,62662],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005787"}]},"cv_name":"cellular_component","definition":"A protein complex which is capable of endopeptidase activity.","definition_xrefs":["PMID:1689240","GO_REF:0000088","GOC:bhm","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidase complex","termid":"GO:1905368"}],"gene_count":50,"genes_by_uniquename":{"SJAG_00128":null,"SJAG_00460":null,"SJAG_00712":null,"SJAG_00738":null,"SJAG_00762":null,"SJAG_00766":null,"SJAG_00778":null,"SJAG_00808":null,"SJAG_00846":null,"SJAG_01014":null,"SJAG_01131":null,"SJAG_01203":null,"SJAG_01489":null,"SJAG_01544":null,"SJAG_01652":null,"SJAG_01750":null,"SJAG_02341":null,"SJAG_02397":null,"SJAG_02502":null,"SJAG_02542":null,"SJAG_02562":null,"SJAG_02776":null,"SJAG_02809":null,"SJAG_02867":null,"SJAG_02900":null,"SJAG_02992":null,"SJAG_03151":null,"SJAG_03261":null,"SJAG_03292":null,"SJAG_03321":null,"SJAG_03408":null,"SJAG_03638":null,"SJAG_03648":null,"SJAG_03672":null,"SJAG_03737":null,"SJAG_04088":null,"SJAG_04144":null,"SJAG_04211":null,"SJAG_04229":null,"SJAG_04306":null,"SJAG_04357":null,"SJAG_04477":null,"SJAG_04484":null,"SJAG_04541":null,"SJAG_04572":null,"SJAG_04641":null,"SJAG_04888":null,"SJAG_04969":null,"SJAG_05278":null,"SJAG_05316":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"endopeptidase complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:1905369","terms_by_termid":{"GO:0000502":null,"GO:0005787":null,"GO:0008540":null,"GO:0008541":null,"GO:0017087":null,"GO:0019773":null,"GO:0019774":null,"GO:0042720":null,"GO:0042765":null,"GO:1990520":null}}


id: GO:0006047
data:
  {"annotated_genes":["SJAG_04728","SJAG_00978","SJAG_00519","SJAG_03723","SJAG_01443"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72738,78346,58554,73673,68687],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006048"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving UDP-N-acetylglucosamine, a substance composed of N-acetylglucosamine, a common structural unit of oligosaccharides, in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino sugar metabolic process","termid":"GO:0006040"},{"relation_name":"is_a","term_name":"nucleotide-sugar metabolic process","termid":"GO:0009225"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00519":null,"SJAG_00978":null,"SJAG_01443":null,"SJAG_03723":null,"SJAG_04728":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"UDP-N-acetylglucosamine metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null},"synonyms":[{"name":"UDP-N-acetylglucosamine metabolism","type":"exact"}],"termid":"GO:0006047","terms_by_termid":{"GO:0006048":null}}


id: GO:0051370
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to Z-band alternatively spliced PDZ motif protein (ZASP). ZASP is a Z-band protein specifically expressed in heart and skeletal muscle. This protein contains N-terminal PDZ domain and C-terminal LIM domain.","definition_xrefs":["PMID:10427098","PMID:11699871"],"gene_count":0,"genotype_count":0,"name":"obsolete ZASP binding (obsolete GO:0051370)","synonyms":[{"name":"Z-band alternatively spliced PDZ-motif protein binding","type":"exact"},{"name":"ZASP binding","type":"exact"}],"termid":"GO:0051370"}


id: PBO:0077513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM230 pseudogene 1","termid":"PBO:0077513"}


id: PBO:0083569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified ORF KCC4","termid":"PBO:0083569"}


id: GO:0001178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of a process involved in the selection of the specific location within the template strand of an RNA polymerase II promoter for hybridization of the cognate ribonucleotides and formation of first phosphodiester bond within the nascent transcript.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transcription, start site selection","termid":"GO:0010630"},{"relation_name":"is_a","term_name":"regulation of transcription initiation by RNA polymerase II","termid":"GO:0060260"},{"relation_name":"regulates","term_name":"transcriptional start site selection at RNA polymerase II promoter","termid":"GO:0001174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"}],"interesting_parent_ids":["GO:0006355","GO:0008150","GO:0006351","GO:0010467"],"is_obsolete":false,"name":"regulation of transcriptional start site selection at RNA polymerase II promoter","synonyms":[{"name":"regulation of transcription start site selection at RNA polymerase II promoter","type":"exact"}],"termid":"GO:0001178"}


id: PBO:0085142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar protein that forms a complex with Csm1p; and then Mam1p at kinetochores during meiosis I to mediate accurate homolog segregation; required for condensin recruitment to the replication fork barrier site and rDNA repeat segregation","termid":"PBO:0085142"}


id: MONDO:0002496
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenocarcinoma of the colon that has invaded into the submucosa.","definition_xrefs":["NCIT:C38760"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colon adenocarcinoma","termid":"MONDO:0002271"},{"relation_name":"is_a","term_name":"invasive carcinoma","termid":"MONDO:0040677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"submucosal invasive colon adenocarcinoma","secondary_identifiers":["DOID:3038","UMLS:C1515024","MEDGEN:271523"],"synonyms":[{"name":"submucosal invasive colon adenocarcinoma","type":"exact"}],"termid":"MONDO:0002496","xrefs":{"Monarch":{"xref_id":"0002496"}}}


id: MONDO:1012945
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cerebellar abiotrophy that occurs in dogs due to a mutation in the VMP1 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebellar abiotrophy, dog","termid":"MONDO:1012038"},{"relation_name":"is_a","term_name":"cerebellar ataxia, dog","termid":"MONDO:1012957"},{"relation_name":"is_a","term_name":"hereditary cerebellar ataxia, non-human animal","termid":"MONDO:1012960"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebellar abiotrophy, VMP1-related, dog","secondary_identifiers":["OMIA:002602-9615"],"termid":"MONDO:1012945","xrefs":{"Monarch":{"xref_id":"1012945"}}}


id: GO:0035069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stage-specific break down of the larval midgut during Drosophila metamorphosis, to allow replacement of larval structures by tissues and structures that form the adult fly.","definition_xrefs":["GOC:mtg_apoptosis","GOC:bf","GOC:dph","PMID:9409683"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure regression","termid":"GO:0060033"},{"relation_name":"part_of","term_name":"metamorphosis","termid":"GO:0007552"},{"relation_name":"part_of","term_name":"instar larval or pupal morphogenesis","termid":"GO:0048707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"larval midgut histolysis","synonyms":[{"name":"larval midgut regression","type":"exact"}],"termid":"GO:0035069"}


id: PBO:0061387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 47","termid":"PBO:0061387"}


id: FYPO:0001885
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal when the cell is subject to salt stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during cellular response to osmotic stress","termid":"FYPO:0002376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0002274"],"is_obsolete":false,"name":"decreased protein phosphorylation during salt stress","synonyms":[{"name":"decreased protein phosphorylation during salt stress during mitotic cell cycle","type":"related"},{"name":"decreased protein phosphorylation during salt stress during vegetative growth","type":"exact"},{"name":"reduced protein phosphorylation during salt stress","type":"exact"}],"termid":"FYPO:0001885"}


id: PATO:0000214
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000214 reproductive function (obsolete PATO:0000214)","termid":"PATO:0000214"}


id: GO:0099185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprised of intermediate filament and their associated proteins in the postsynaptic cytoskeleton.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intermediate filament cytoskeleton organization","termid":"GO:0045104"},{"relation_name":"is_a","term_name":"postsynaptic cytoskeleton organization","termid":"GO:0099188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0008150"],"is_obsolete":false,"name":"postsynaptic intermediate filament cytoskeleton organization","termid":"GO:0099185"}


id: GO:0008413
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 8-oxo-7,8-dihydroguanosine triphosphate (8-oxo-GTP) + H2O = 8-oxo-7,8-dihydroguanosine diphosphate (8-oxo-GDP) + phosphate. 8-oxo-7,8-dihydroguanosine triphosphate (8-oxo-GTP) is the oxidised form of the free guanine nucleotide and can act as a potent mutagenic substrate for transcription.","definition_xrefs":["RHEA:60032","PMID:15878881"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate diphosphatase activity","termid":"GO:0047429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0047429"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0047429","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"8-oxo-7,8-dihydroguanosine triphosphate pyrophosphatase activity","secondary_identifiers":["EC:3.6.1.69"],"synonyms":[{"name":"7,8-dihydro-8-oxoguanine-triphosphatase activity","type":"exact"},{"name":"8-oxo-7,8-dihydroguanine triphosphatase activity","type":"exact"},{"name":"8-oxo-7,8-dihydroguanosine triphosphatase activity","type":"exact"},{"name":"8-oxo-GTPase activity","type":"exact"}],"termid":"GO:0008413"}


id: FYPO:0001378
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of calcium ion measured in a cell during a cellular response to salt stress is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular calcium level","termid":"FYPO:0001198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular calcium level during cellular response to salt stress","synonyms":[{"name":"increased calcium accumulation during cellular response to salt stress","type":"related"},{"name":"increased cellular calcium ion level during cellular response to salt stress","type":"exact"},{"name":"increased cellular calcium level during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"increased cellular calcium level during cellular response to salt stress during vegetative growth","type":"exact"}],"termid":"FYPO:0001378"}


id: GO:0015633
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Zn2+(out) = ADP + phosphate + Zn2+(in).","definition_xrefs":["RHEA:29795"],"direct_ancestors":[{"relation_name":"is_a","term_name":"zinc ion transmembrane transporter activity","termid":"GO:0005385"},{"relation_name":"is_a","term_name":"ATPase-coupled monoatomic cation transmembrane transporter activity","termid":"GO:0019829"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"ABC-type zinc transporter activity","secondary_identifiers":["EC:7.2.2.20","MetaCyc:ABC-63-RXN"],"synonyms":[{"name":"ATP-dependent zinc transmembrane transporter activity","type":"broad"},{"name":"ATPase-coupled zinc transmembrane transporter activity","type":"broad"},{"name":"zinc porter activity","type":"related"},{"name":"zinc transporting ATPase activity","type":"broad"},{"name":"zinc-transporting ATPase activity","type":"broad"}],"termid":"GO:0015633"}


id: GO:1904937
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a sensory neuron from one site to another.","definition_xrefs":["PMID:18622031","GO_REF:0000091","GOC:ah","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron migration","termid":"GO:0001764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory neuron migration","termid":"GO:1904937"}


id: PBO:0052111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily B member 1","termid":"PBO:0052111"}


id: FYPO:0000897
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrial fission, the division of a mitochondrion into two or more separate compartments, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","GO:0000266"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal mitochondrial fission","synonyms":[{"name":"normal mitochondrial division","type":"exact"},{"name":"normal mitochondrial fission during mitotic cell cycle","type":"related"},{"name":"normal mitochondrial fission during vegetative growth","type":"exact"},{"name":"normal mitochondrial proliferation","type":"related"}],"termid":"FYPO:0000897"}


id: MONDO:0859378
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"leukodystrophy, hypomyelinating, 25","secondary_identifiers":["MEDGEN:1840911","OMIM:620243","DOID:0070401","UMLS:C5830275"],"termid":"MONDO:0859378","xrefs":{"Monarch":{"xref_id":"0859378"}}}


id: PBO:0036264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-Not complex scaffold subunit Not1","termid":"PBO:0036264"}


id: PBO:0050466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HORMAD2 and MTMR3 antisense RNA 1","termid":"PBO:0050466"}


id: GO:0005995
data:
  {"annotated_genes":["SJAG_02949"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[69616],"is_not":false,"summary":null,"term":"GO:0005995"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of melibiose, the disaccharide 6-O-alpha-D-galactopyranosyl-D-glucose.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melibiose metabolic process","termid":"GO:0005994"},{"relation_name":"is_a","term_name":"disaccharide catabolic process","termid":"GO:0046352"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02949":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"melibiose catabolic process","references_by_uniquename":{"GO_REF:0000117":null},"synonyms":[{"name":"melibiose breakdown","type":"exact"},{"name":"melibiose catabolism","type":"exact"},{"name":"melibiose degradation","type":"exact"}],"termid":"GO:0005995","terms_by_termid":{"GO:0005995":null}}


id: GO:0000230
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A chromosome found in the nucleus during mitosis.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete nuclear mitotic chromosome (obsolete GO:0000230)","synonyms":[{"name":"nuclear mitotic chromosome","type":"exact"}],"termid":"GO:0000230"}


id: MONDO:0003949
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cervical adenoma malignum (obsolete MONDO:0003949)","termid":"MONDO:0003949","xrefs":{"Monarch":{"xref_id":"0003949"}}}


id: GO:0007049
data:
  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id: GO:0043791
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dimethylamine + a dimethylamine corrinoid protein = a methylated dimethylamine corrinoid protein + methylamine.","definition_xrefs":["PMID:9874228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"dimethylamine methyltransferase activity","secondary_identifiers":["EC:2.1.1.249","MetaCyc:RXN-8100","RHEA:41175"],"synonyms":[{"name":"DMA methyltransferase 1","type":"exact"},{"name":"DMAMT 1","type":"exact"},{"name":"MT1","type":"broad"},{"name":"dimethylamine-specific methylcobalamin:coenzyme M methyltransferase activity","type":"narrow"},{"name":"dimethylamine:corrinoid methyltransferase activity","type":"exact"},{"name":"mtbB1","type":"related"}],"termid":"GO:0043791"}


id: FYPO:0001713
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of malate into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal malate import","synonyms":[{"name":"abnormal malate import across plasma membrane","type":"exact"},{"name":"abnormal malate import during mitotic cell cycle","type":"related"},{"name":"abnormal malate import during vegetative growth","type":"exact"},{"name":"abnormal malate import into cell","type":"exact"},{"name":"abnormal malate uptake","type":"exact"},{"name":"abnormal malic acid import","type":"related"}],"termid":"FYPO:0001713"}


id: GO:1900497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of butyryl-CoA catabolic process to butanol.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fatty acid metabolic process","termid":"GO:0019217"},{"relation_name":"is_a","term_name":"regulation of nucleobase-containing compound metabolic process","termid":"GO:0019219"},{"relation_name":"is_a","term_name":"regulation of phosphate metabolic process","termid":"GO:0019220"},{"relation_name":"is_a","term_name":"regulation of amide metabolic process","termid":"GO:0034248"},{"relation_name":"is_a","term_name":"regulation of sulfur metabolic process","termid":"GO:0042762"},{"relation_name":"is_a","term_name":"regulation of lipid biosynthetic process","termid":"GO:0046890"},{"relation_name":"is_a","term_name":"regulation of lipid catabolic process","termid":"GO:0050994"},{"relation_name":"is_a","term_name":"regulation of alcohol biosynthetic process","termid":"GO:1902930"},{"relation_name":"regulates","term_name":"butyryl-CoA catabolic process to butanol","termid":"GO:0044582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0006790","GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"regulation of butyryl-CoA catabolic process to butanol","synonyms":[{"name":"regulation of butyryl-CoA catabolism to butanol","type":"exact"}],"termid":"GO:1900497"}


id: GO:0047941
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-gulono-1,4-lactone + NADP+ = D-glucurono-3,6-lactone + H+ + NADPH.","definition_xrefs":["EC:1.1.1.20","RHEA:18925"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"glucuronolactone reductase activity","secondary_identifiers":["KEGG_REACTION:R03183","MetaCyc:GLUCURONOLACTONE-REDUCTASE-RXN"],"termid":"GO:0047941"}


id: FYPO:0004466
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Rad52 (also called Rad22) accumulates is greater than normal during a cellular response to camptothecin.","definition_xrefs":["PomBase:mah","PMID:22064477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased number of Rad52 foci during vegetative growth","termid":"FYPO:0000972"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased number of Rad52 foci during cellular response to camptothecin","synonyms":[{"name":"increased number of Rad22 foci during cellular response to camptothecin","type":"exact"},{"name":"increased number of Rad52 foci during cellular response to CPT","type":"exact"},{"name":"increased number of Rad52 foci during cellular response to camptothecin during mitotic cell cycle","type":"related"},{"name":"increased number of Rad52 foci during cellular response to camptothecin during vegetative growth","type":"exact"}],"termid":"FYPO:0004466"}


id: PomGeneEx:0000012
data:
  {"annotation_feature_type":"gene","cv_name":"PomGeneExRNA","definition":"A gene expression qualifier that indicates that an RNA is present at a lower level under one set of conditions or at one indicated time than otherwise.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased","termid":"PomGeneEx:0000003"},{"relation_name":"is_a","term_name":"RNA expression level","termid":"PomGeneEx:0000009"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA level decreased","synonyms":[{"name":"RNA expression decreased","type":"exact"},{"name":"decreased RNA level","type":"exact"}],"termid":"PomGeneEx:0000012"}


id: GO:0060830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Grouping of smoothened or patched receptors in a cilium, contributing to the smoothened signaling pathway.","definition_xrefs":["GOC:cilia","GOC:dph","GOC:tb","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor clustering","termid":"GO:0043113"},{"relation_name":"part_of","term_name":"smoothened signaling pathway","termid":"GO:0007224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"ciliary receptor clustering involved in smoothened signaling pathway","synonyms":[{"name":"ciliary receptor clustering involved in hedgehog signaling pathway","type":"exact"},{"name":"ciliary receptor clustering involved in hh signaling pathway","type":"exact"},{"name":"ciliary receptor clustering involved in smoothened signalling pathway","type":"exact"}],"termid":"GO:0060830"}


id: PBO:0070358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 31","termid":"PBO:0070358"}


id: PBO:0052260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine demethylase 2A","termid":"PBO:0052260"}


id: PBO:0057174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR325 host gene","termid":"PBO:0057174"}


id: GO:0030807
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of chemical reactions and pathways resulting in the breakdown of cyclic nucleotides.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cyclic nucleotide catabolic process (obsolete GO:0030807)","synonyms":[{"name":"activation of cyclic nucleotide catabolic process","type":"narrow"},{"name":"positive regulation of cyclic nucleotide breakdown","type":"exact"},{"name":"positive regulation of cyclic nucleotide catabolism","type":"exact"},{"name":"positive regulation of cyclic nucleotide degradation","type":"exact"},{"name":"stimulation of cyclic nucleotide catabolic process","type":"narrow"},{"name":"up regulation of cyclic nucleotide catabolic process","type":"exact"},{"name":"up-regulation of cyclic nucleotide catabolic process","type":"exact"},{"name":"upregulation of cyclic nucleotide catabolic process","type":"exact"}],"termid":"GO:0030807"}


id: MONDO:0014471
data:
  {"annotated_genes":["SJAG_02564","SJAG_07003","SJAG_01503","SJAG_00133"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88683],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020727"},{"annotations":[88672],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032869"},{"annotations":[86891],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014091"},{"annotations":[87278],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011421"},{"annotations":[88341],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957254"},{"annotations":[88340],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957255"}]},"cv_name":"mondo","definition":"A rare, genetic, mitochondrial oxidative phosphorylation disorder that may present with a wide range of symptoms (including muscular hypotonia, hypertrophic cardiomyopathy, psychomotor delay, encephalopathy, peripheral neuropathy, lactic acidosis, 3-methylglutaconic aciduria) and clinical syndromes (including NARP and MILS).","definition_xrefs":["Orphanet:254913"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete isolated oxidative phosphorylation complex disorder (obsolete MONDO:0016805)","termid":"MONDO:0016805"},{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00133":null,"SJAG_01503":null,"SJAG_02564":null,"SJAG_07003":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial proton-transporting ATP synthase complex deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18649","OMIMPS:604273","UMLS:C4757950","MEDGEN:1655626","icd11.foundation:902255625","DOID:0111143"],"synonyms":[{"name":"isolated ATP synthase deficiency","type":"narrow"},{"name":"isolated mitochondrial respiratory chain complex V deficiency","type":"narrow"},{"name":"mitochondrial complex V (ATP synthase) deficiency","type":"exact"}],"termid":"MONDO:0014471","terms_by_termid":{"MONDO:0011421":null,"MONDO:0014091":null,"MONDO:0020727":null,"MONDO:0032869":null,"MONDO:0957254":null,"MONDO:0957255":null},"xrefs":{"Monarch":{"xref_id":"0014471"}}}


id: PR:O14120
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mvp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin mvp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A11.06","synonyms":[{"name":"Spom972h-mvp1","type":"exact"}],"termid":"PR:O14120"}


id: GO:2000558
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of immunoglobulin production in mucosal tissue.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immunoglobulin production","termid":"GO:0002639"},{"relation_name":"is_a","term_name":"positive regulation of immunoglobulin mediated immune response","termid":"GO:0002891"},{"relation_name":"is_a","term_name":"regulation of immunoglobulin production in mucosal tissue","termid":"GO:2000557"},{"relation_name":"positively_regulates","term_name":"immunoglobulin production in mucosal tissue","termid":"GO:0002426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of immunoglobulin production in mucosal tissue","synonyms":[{"name":"positive regulation of antibody production in mucosal tissue","type":"exact"}],"termid":"GO:2000558"}


id: PBO:0063576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPARGC1 and ESRR induced regulator, muscle 1","termid":"PBO:0063576"}


id: GO:0017074
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of the N-propeptide of collagen chain alpha-1(I) at Pro-Gln and of alpha-1(II) and alpha-2(I) chains at Ala-Gln.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete procollagen N-endopeptidase activity (obsolete GO:0017074)","synonyms":[{"name":"aminoprocollagen peptidase activity","type":"related"},{"name":"aminoterminal procollagen peptidase activity","type":"related"},{"name":"procollagen N-endopeptidase activity","type":"exact"},{"name":"procollagen N-proteinase activity","type":"related"},{"name":"procollagen N-terminal peptidase activity","type":"related"},{"name":"procollagen N-terminal proteinase activity","type":"related"},{"name":"procollagen aminopeptidase activity","type":"related"},{"name":"procollagen aminoterminal protease activity","type":"related"},{"name":"type I/II procollagen N-proteinase activity","type":"related"},{"name":"type III procollagen","type":"related"}],"termid":"GO:0017074"}


id: PBO:0042387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD300e molecule","termid":"PBO:0042387"}


id: FYPO:0004149
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of pyridoxal kinase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal pyridoxal kinase activity","termid":"FYPO:0004149"}


id: GO:0048817
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of hair follicle maturation.","definition_xrefs":["GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hair follicle maturation","termid":"GO:0048819"},{"relation_name":"is_a","term_name":"negative regulation of hair follicle development","termid":"GO:0051799"},{"relation_name":"negatively_regulates","term_name":"hair follicle maturation","termid":"GO:0048820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hair follicle maturation","synonyms":[{"name":"down regulation of hair follicle maturation","type":"exact"},{"name":"down-regulation of hair follicle maturation","type":"exact"},{"name":"downregulation of hair follicle maturation","type":"exact"},{"name":"inhibition of hair follicle maturation","type":"narrow"}],"termid":"GO:0048817"}


id: GO:0004708
data:
  {"annotated_genes":["SJAG_02342","SJAG_00993","SJAG_01181"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73280,76169,78046],"is_not":false,"summary":null,"term":"GO:0004708"}]},"cv_name":"molecular_function","definition":"Catalysis of the concomitant phosphorylation of threonine (T) and tyrosine (Y) residues in a T-X-Y motif in the activation loop of a MAP kinase (MAPK) substrate.","definition_xrefs":["PMID:38270553","PMID:12623839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine/tyrosine kinase activity","termid":"GO:0004712"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00993":null,"SJAG_01181":null,"SJAG_02342":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0004672","GO:0016740","GO:0016301","GO:0003674","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"MAP kinase kinase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:2.7.12.2","Reactome:R-HSA-448951","Reactome:R-HSA-5218804","Reactome:R-HSA-3238999","Reactome:R-HSA-450333","MetaCyc:2.7.12.2-RXN","Reactome:R-HSA-1247960"],"synonyms":[{"name":"ATP:protein phosphotransferase (MAPKKK-activated) activity","type":"related"},{"name":"ERK activator kinase activity","type":"exact"},{"name":"MAP kinase kinase 4 activity","type":"narrow"},{"name":"MAP kinase kinase 7 activity","type":"narrow"},{"name":"MAP kinase or ERK kinase activity","type":"related"},{"name":"MAP2K","type":"related"},{"name":"MAPK activator activity","type":"exact"},{"name":"MAPKK","type":"related"},{"name":"MAPKK activity","type":"exact"},{"name":"MAPKK1","type":"related"},{"name":"MEK activity","type":"broad"},{"name":"MEK1","type":"related"},{"name":"MEK2","type":"related"},{"name":"MKK","type":"related"},{"name":"MKK2","type":"related"},{"name":"MKK4","type":"related"},{"name":"MKK6","type":"related"},{"name":"MKK7","type":"related"},{"name":"STK27","type":"related"},{"name":"mitogen-activated protein kinase kinase activity","type":"related"}],"termid":"GO:0004708","terms_by_termid":{"GO:0004708":null}}


id: PBO:0077367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 106C","termid":"PBO:0077367"}


id: MONDO:1012110
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypoadrenocorticism, non-human animal","termid":"MONDO:1011675"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoadrenocorticism, domestic cat","secondary_identifiers":["OMIA:000519-9685"],"termid":"MONDO:1012110","xrefs":{"Monarch":{"xref_id":"1012110"}}}


id: PBO:0068916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 159, pseudogene","termid":"PBO:0068916"}


id: PBO:0051925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit beta 7","termid":"PBO:0051925"}


id: PBO:0044604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDB1 and CUL4 associated factor 10","termid":"PBO:0044604"}


id: GO:1901884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 4-hydroxycoumarin.","definition_xrefs":["GOC:TermGenie","PMID:19757094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coumarin biosynthetic process","termid":"GO:0009805"},{"relation_name":"is_a","term_name":"4-hydroxycoumarin metabolic process","termid":"GO:1901882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"4-hydroxycoumarin biosynthetic process","synonyms":[{"name":"4-hydroxycoumarin anabolism","type":"exact"},{"name":"4-hydroxycoumarin biosynthesis","type":"exact"},{"name":"4-hydroxycoumarin formation","type":"exact"},{"name":"4-hydroxycoumarin synthesis","type":"exact"}],"termid":"GO:1901884"}


id: MONDO:0004361
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An ependymoma of the spinal cord occurring in adults.","definition_xrefs":["NCIT:C27399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spinal cord ependymoma","termid":"MONDO:0003473"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adult spinal cord ependymoma","secondary_identifiers":["MEDGEN:231359","DOID:7788","UMLS:C1332215"],"synonyms":[{"name":"adult spinal cord ependymoma","type":"exact"},{"name":"spinal cord ependymoma","type":"broad"},{"name":"spinal cord ependymoma of adults","type":"exact"}],"termid":"MONDO:0004361","xrefs":{"Monarch":{"xref_id":"0004361"}}}


id: MONDO:0012370
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive nonsyndromic deafness that has material basis in variation in the chromosome region 11p13-p12.","definition_xrefs":["PMID:16158433","DOID:0110508"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019497"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 51","secondary_identifiers":["UMLS:C1864968","OMIM:609941","MEDGEN:355880","GARD:9918","MESH:C538202"],"synonyms":[{"name":"DFNB51","type":"narrow"},{"name":"autosomal recessive deafness 51","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 51","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 51","type":"narrow"},{"name":"deafness, autosomal recessive 51","type":"narrow"}],"termid":"MONDO:0012370","xrefs":{"Monarch":{"xref_id":"0012370"}}}


id: FYPO:0001379
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of tacrolimus than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0000139","FYPO:0002682","FYPO:0005447"],"is_obsolete":false,"name":"resistance to tacrolimus","synonyms":[{"name":"resistance to FK506","type":"exact"},{"name":"resistance to tacrolimus during mitotic cell cycle","type":"related"},{"name":"resistance to tacrolimus during vegetative growth","type":"exact"},{"name":"resistant to tacrolimus","type":"exact"}],"termid":"FYPO:0001379"}


id: PBO:0051544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 6 cytokine family signal transducer","termid":"PBO:0051544"}


id: SO:0001810
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polypeptide region that mediates binding to PCNA. The consensus sequence is QXX(hh)XX(aa), where (h) denotes residues with moderately hydrophobic side chains and (a) denotes residues with highly hydrophobic aromatic side chains.","definition_xrefs":["PMID:9631646"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein_protein_contact","termid":"SO:0001093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"PIP_box","synonyms":[{"name":"PIP box","type":"exact"}],"termid":"SO:0001810"}


id: SO:0002141
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An origin of replication that initiates late in S phase.","definition_xrefs":["PMID:23348837","PMID:9115207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"origin_of_replication","termid":"SO:0000296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late_origin_of_replication","synonyms":[{"name":"late origin","type":"exact"},{"name":"late origin of replication","type":"exact"},{"name":"late replication origin","type":"exact"}],"termid":"SO:0002141"}


id: PBO:0054926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2340","termid":"PBO:0054926"}


id: PBO:0002543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial endodeoxyribonuclease Pnu1","termid":"PBO:0002543"}


id: MONDO:1012646
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant form of nephritis that occurs in dogs.","definition_xrefs":["MONDO:patterns/autosomal_dominant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephritis, dog","termid":"MONDO:1011045"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autosomal dominant nephritis, dog","secondary_identifiers":["OMIA:001114-9615"],"synonyms":[{"name":"Alport syndrome, dog","type":"related"},{"name":"nephritis, autosomal dominant","type":"exact"}],"termid":"MONDO:1012646","xrefs":{"Monarch":{"xref_id":"1012646"}}}


id: PBO:0046212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 5","termid":"PBO:0046212"}


id: GO:0005504
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a fatty acid, an aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid binding","termid":"GO:0008289"},{"relation_name":"is_a","term_name":"monocarboxylic acid binding","termid":"GO:0033293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0008289"],"is_obsolete":false,"name":"fatty acid binding","termid":"GO:0005504"}


id: PBO:0087848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPR-containing co-chaperone; binds both Hsp82p (Hsp90) and Ssa1p (Hsp70); stimulates ATPase activity of Ssa1p; ts mutants reduce Hsp82p function, overexpression suppresses phenotypes of HSP82 ts allele and cpr7 deletion; human homolog TTC4 complements yeast cns1 mutant","termid":"PBO:0087848"}


id: PBO:0026846
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions,_binucleate_septated_cell","termid":"PBO:0026846"}


id: PR:Q9UTF7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1B2.03c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTF7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation of fatty acids protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B2.03c","synonyms":[{"name":"3-keto acyl-CoA synthase SPAC1B2.03c (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC1B2.03c","type":"exact"},{"name":"very-long-chain 3-oxoacyl-CoA synthase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTF7"}


id: GO:1900290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of coenzyme F420-dependent bicyclic nitroimidazole catabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"regulation of coenzyme F420-dependent bicyclic nitroimidazole catabolic process","termid":"GO:1900288"},{"relation_name":"positively_regulates","term_name":"coenzyme F420-dependent bicyclic nitroimidazole catabolic process","termid":"GO:0052799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of coenzyme F420-dependent bicyclic nitroimidazole catabolic process","synonyms":[{"name":"activation of coenzyme F420-dependent bicyclic nitroimidazole catabolic process","type":"narrow"},{"name":"activation of coenzyme F420-dependent nitroimidazole breakdown","type":"narrow"},{"name":"activation of coenzyme F420-dependent nitroimidazole catabolism","type":"narrow"},{"name":"activation of coenzyme F420-dependent nitroimidazole reduction","type":"narrow"},{"name":"activation of coenzyme F420-dependent nitroreductase activity","type":"related"},{"name":"positive regulation of coenzyme F420-dependent nitroimidazole breakdown","type":"exact"},{"name":"positive regulation of coenzyme F420-dependent nitroimidazole catabolism","type":"exact"},{"name":"positive regulation of coenzyme F420-dependent nitroimidazole reduction","type":"exact"},{"name":"positive regulation of coenzyme F420-dependent nitroreductase activity","type":"related"},{"name":"up regulation of coenzyme F420-dependent bicyclic nitroimidazole catabolic process","type":"exact"},{"name":"up regulation of coenzyme F420-dependent nitroimidazole breakdown","type":"exact"},{"name":"up regulation of coenzyme F420-dependent nitroimidazole catabolism","type":"exact"},{"name":"up regulation of coenzyme F420-dependent nitroimidazole reduction","type":"exact"},{"name":"up regulation of coenzyme F420-dependent nitroreductase activity","type":"related"},{"name":"up-regulation of coenzyme F420-dependent bicyclic nitroimidazole catabolic process","type":"exact"},{"name":"up-regulation of coenzyme F420-dependent nitroimidazole breakdown","type":"exact"},{"name":"up-regulation of coenzyme F420-dependent nitroimidazole catabolism","type":"exact"},{"name":"up-regulation of coenzyme F420-dependent nitroimidazole reduction","type":"exact"},{"name":"up-regulation of coenzyme F420-dependent nitroreductase activity","type":"related"},{"name":"upregulation of coenzyme F420-dependent bicyclic nitroimidazole catabolic process","type":"exact"},{"name":"upregulation of coenzyme F420-dependent nitroimidazole breakdown","type":"exact"},{"name":"upregulation of coenzyme F420-dependent nitroimidazole catabolism","type":"exact"},{"name":"upregulation of coenzyme F420-dependent nitroimidazole reduction","type":"exact"},{"name":"upregulation of coenzyme F420-dependent nitroreductase activity","type":"related"}],"termid":"GO:1900290"}


id: MONDO:0021727
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aberrant subclavian artery is a rare vascular anomaly that is present from birth. It usually causes no symptoms and is oftendiscovered as an incidental finding (such as througha barium swallow or echocardiogram). Occasionally the anomaly causes swallowing difficulty (dysphagia lusoria). Swallowing symptoms in childrenmay present asfeeding difficulty and/or recurrent respiratory tract infection. When aberrant subclavian artery causes no symptoms, treatment is not needed. If the anomaly is causing significant symptoms, treatment may involve surgery. Children with symptomatic aberrant subclavian artery should be carefully evaluated for additional vascular and heart anomalies..","definition_xrefs":["GARD:0005706"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arterial disorder","termid":"MONDO:0000473"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aberrant subclavian artery","secondary_identifiers":["MEDGEN:98134","SCTID:93353003","UMLS:C0431498","MESH:C535555"],"synonyms":[{"name":"aberrant left subclavian artery","type":"narrow"},{"name":"aberrant right subclavian artery","type":"narrow"},{"name":"aberrant subclavian artery","type":"exact"},{"name":"congenital malposition of subclavian artery","type":"exact"},{"name":"congenital malpositioned subclavian artery","type":"related"}],"termid":"MONDO:0021727","xrefs":{"Monarch":{"xref_id":"0021727"}}}


id: PBO:0048669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactosidase alpha","termid":"PBO:0048669"}


id: PBO:0004658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Tma20 (predicted)","termid":"PBO:0004658"}


id: PR:O94481
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription factor TFIIIB component B'' that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR22929:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIIB component B'' (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1919.14c","secondary_identifiers":["UniProtKB:O94481"],"synonyms":[{"name":"SPCC1919.14c","type":"related"},{"name":"Spom972h-BDP1","type":"exact"},{"name":"tfc5","type":"related"},{"name":"transcription factor TFIIIB complex subunit bdp1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94481"}


id: GO:0021848
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The division of neuroblasts in the subpallium area of the forebrain. The interneuron precursors that these cells give rise to include GABAergic interneurons and will migrate tangentially.","definition_xrefs":["GOC:jid","PMID:12626695","GOC:cls","GOC:dgh","GOC:dph","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroblast division","termid":"GO:0055057"},{"relation_name":"part_of","term_name":"subpallium cell proliferation in forebrain","termid":"GO:0022012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuroblast division in subpallium","synonyms":[{"name":"neuroblast division in the ventral telencephalon","type":"exact"}],"termid":"GO:0021848"}


id: PBO:0034033
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canto_experiment_type","termid":"PBO:0034033"}


id: PBO:0085174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Omega class glutathione transferase; putative cytosolic localization","termid":"PBO:0085174"}


id: PBO:0039529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD33B pseudogene 10","termid":"PBO:0039529"}


id: GO:0001544
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Increase in size of primordial follicles including proliferation and shape changes of granulosa and/or theca cells until oocyte is surrounded by one layer of cuboidal shaped granulosa cells (primary follicle).","direct_ancestors":[{"relation_name":"is_a","term_name":"ovulation cycle process","termid":"GO:0022602"},{"relation_name":"part_of","term_name":"ovarian follicle development","termid":"GO:0001541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"initiation of primordial ovarian follicle growth","termid":"GO:0001544"}


id: PBO:0012015
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"the phenotypes attributed to ima1 in PMID:18692466 have since been attributed to a truncated allele of SPAC11E3.05","termid":"PBO:0012015"}


id: FYPO:0004005
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a gene product binds chromatin over a larger portion of the chromosome than normal.","definition_xrefs":["PMID:18753627","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin binding","termid":"FYPO:0002576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"increased spatial extent of chromatin binding","termid":"FYPO:0004005"}


id: PBO:0077006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP domain containing 12 pseudogene 8","termid":"PBO:0077006"}


id: PBO:0035965
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_Rad52_foci_during_cellular_response_to_acetaldehyde","termid":"PBO:0035965"}


id: GO:1905474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any canonical Wnt signaling pathway that is involved in stem cell proliferation.","definition_xrefs":["GOC:PARL","GOC:TermGenie","PMID:25640183","GOC:bc","GO_REF:0000060"],"gene_count":0,"genotype_count":0,"name":"obsolete canonical Wnt signaling pathway involved in stem cell proliferation (obsolete GO:1905474)","synonyms":[{"name":"Wnt receptor signaling pathway through beta-catenin involved in stem cell proliferation","type":"exact"},{"name":"Wnt receptor signaling pathway via beta-catenin involved in stem cell proliferation","type":"exact"},{"name":"Wnt receptor signalling pathway through beta-catenin involved in stem cell proliferation","type":"exact"},{"name":"canonical Wnt receptor signaling pathway involved in stem cell proliferation","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in stem cell proliferation","type":"exact"},{"name":"frizzled-1 receptor signaling pathway involved in stem cell proliferation","type":"narrow"}],"termid":"GO:1905474"}


id: MONDO:0018039
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Selective IgM deficiency (SIgMD) is a rare immune disorder that has been reported in association with serious infections, such as bacteria in the blood (bacteremia, also known as septicemia). Although SIgMD was first described in two children, the disorder can occur in babies, children, and adults. It is characterized by isolated absence or deficiency of immunoglobulin M (IgM), normal levels of other immunoglobulins, and recurrent infections (especially by Staphylococcus aureus, Streptococcus pneumoniae, Hemophilus influenza). The cause is still unclear. The diagnosis includes isolated deficiency ofIgM in the blood and no other immunodeficiency or secondary cause of low IgM. Patients with SIgMD and recurrent infections are managed like other antibody defects and deficiencies. It is suggested that people with SIgMD have pneumococcal and meningococcal vaccines, people with SIgMD who have recurrent infections should have prophylactic antibiotics and immune globulin replacement.","direct_ancestors":[{"relation_name":"is_a","term_name":"dysgammaglobulinemia","termid":"MONDO:0001342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"selective IgM deficiency","secondary_identifiers":["GARD:12547","MEDGEN:57820","Orphanet:331235","SCTID:190980000","UMLS:C0154275","DOID:0050222","ICD9:279.02"],"synonyms":[{"name":"SIgMD","type":"related"},{"name":"selective IgM deficiency disease","type":"exact"},{"name":"selective immunoglobulin M deficiency","type":"exact"}],"termid":"MONDO:0018039","xrefs":{"Monarch":{"xref_id":"0018039"}}}


id: PBO:0077923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPT1 pseudogene 14","termid":"PBO:0077923"}


id: GO:0140528
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly and organization of a bilobe structure, a cytoskeletal structure in some kinetoplastid species linking the structures of the ciliary pocket collar and the flagellum attachment zone (aka cilium attachment zone).","definition_xrefs":["PMID:18443217","PMID:32675283"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"part_of","term_name":"cytoskeleton organization","termid":"GO:0007010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"bilobe structure assembly","synonyms":[{"name":"bilobe structure biogenesis","type":"exact"},{"name":"bilobe structure formation","type":"exact"},{"name":"kinetoplastid flagellar hook complex assembly","type":"exact"}],"termid":"GO:0140528"}


id: GO:0035726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of common myeloid progenitor cells, resulting in the expansion of a cell population. A common myeloid progenitor cell is a progenitor cell committed to the myeloid lineage.","definition_xrefs":["CL:0000049","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"common myeloid progenitor cell proliferation","termid":"GO:0035726"}


id: GO:0030159
data:
  {"annotated_genes":["SJAG_03081"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77041],"is_not":false,"summary":null,"term":"GO:0030159"}]},"cv_name":"molecular_function","definition":"The binding activity of a molecule that provides a physical support for the assembly of a multiprotein receptor signaling complex.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling adaptor activity","termid":"GO:0035591"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03081":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0060090","GO:0030674","GO:0003674"],"is_obsolete":false,"name":"signaling receptor complex adaptor activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"receptor signaling complex adaptor activity","type":"exact"},{"name":"receptor signaling complex scaffold activity","type":"exact"},{"name":"receptor signaling complex scaffold protein activity","type":"exact"},{"name":"receptor signalling complex adaptor activity","type":"exact"},{"name":"receptor signalling complex scaffold activity","type":"exact"}],"termid":"GO:0030159","terms_by_termid":{"GO:0030159":null}}


id: GO:0006844
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of acyl carnitine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Acyl carnitine is the condensation product of a carboxylic acid and carnitine and is the transport form for a fatty acid crossing the mitochondrial membrane.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete acyl carnitine transport (obsolete GO:0006844)","termid":"GO:0006844"}


id: GO:0002132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the ribose of uridine at position 34 in the anticodon of a tRNA is post-transcriptionally methylated at the 2'-O position.","definition_xrefs":["GOC:hjd","ISBN:155581073X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"wobble position ribose methylation","termid":"GO:0002130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006399"],"is_obsolete":false,"name":"wobble position uridine ribose methylation","termid":"GO:0002132"}


id: PBO:0041732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium/calmodulin dependent protein kinase IV","termid":"PBO:0041732"}


id: PBO:0028811
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_autophosphorylation_during_vegetative_growth","termid":"PBO:0028811"}


id: MONDO:0001400
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign nerve sheath tumor composed of Schwann cells, occurring in the ureter.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign glioma","termid":"MONDO:0000638"},{"relation_name":"is_a","term_name":"ureter benign neoplasm","termid":"MONDO:0001398"},{"relation_name":"is_a","term_name":"peripheral nerve schwannoma","termid":"MONDO:0004820"},{"relation_name":"is_a","term_name":"benign neoplasm of peripheral nervous system","termid":"MONDO:0056804"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"schwannoma of ureter","secondary_identifiers":["DOID:11888","UMLS:C1336877","NCIT:C6162","MEDGEN:234459"],"synonyms":[{"name":"neurilemmoma of the ureter","type":"exact"},{"name":"neurilemmoma of ureter","type":"exact"},{"name":"schwannoma of the ureter","type":"exact"},{"name":"ureter neurilemmoma","type":"exact"},{"name":"ureter schwannoma","type":"exact"},{"name":"ureteral neurilemmoma","type":"exact"},{"name":"ureteral schwannoma","type":"exact"}],"termid":"MONDO:0001400","xrefs":{"Monarch":{"xref_id":"0001400"}}}


id: MONDO:0015632
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"FASTKD2-related infantile mitochondrial encephalomyopathy","secondary_identifiers":["MEDGEN:1665220","GARD:17026","icd11.foundation:356231901","UMLS:C4755278","Orphanet:166105"],"termid":"MONDO:0015632","xrefs":{"Monarch":{"xref_id":"0015632"}}}


id: MONDO:0001360
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ocular hypotension","termid":"MONDO:0004390"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"blind hypotensive eye","secondary_identifiers":["MEDGEN:509659","DOID:11766","SCTID:23360000","UMLS:C0154788","ICD9:360.41"],"termid":"MONDO:0001360","xrefs":{"Monarch":{"xref_id":"0001360"}}}


id: PBO:0066864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 164","termid":"PBO:0066864"}


id: PBO:0067848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 150","termid":"PBO:0067848"}


id: PBO:0077597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane serine protease 9","termid":"PBO:0077597"}


id: PBO:0029694
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-lobate_nuclear_envelope","termid":"PBO:0029694"}


id: MONDO:0957112
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"muscular channelopathy","termid":"MONDO:0019119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurological muscular channelopathy due to a genetic chloride channel defect","secondary_identifiers":["UMLS:C5681687","MEDGEN:1843259","GARD:19564","Orphanet:98739"],"termid":"MONDO:0957112","xrefs":{"Monarch":{"xref_id":"0957112"}}}


id: MONDO:0014532
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn mitochondrial myopathy","termid":"MONDO:0009637"},{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"},{"relation_name":"is_a","term_name":"metabolic myopathy","termid":"MONDO:0020123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"autosomal dominant mitochondrial myopathy with exercise intolerance","secondary_identifiers":["MEDGEN:863950","UMLS:C4015513","Orphanet:457050","OMIM:616209","DOID:0081357","GARD:17794"],"synonyms":[{"name":"IMMD","type":"related"},{"name":"myopathy, isolated mitochondrial, autosomal dominant","type":"related"}],"termid":"MONDO:0014532","xrefs":{"Monarch":{"xref_id":"0014532"}}}


id: PBO:0073457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surfactant associated 3","termid":"PBO:0073457"}


id: MONDO:0012911
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare type of pseudohypoparathyroidism (PHP) characterized by resistance to parathyroid hormone (PTH) and other hormones, which manifests with hypocalcemia, hyperphosphatemia and elevated PTH levels, a constellation of clinical features collectively termed Albright's hereditary osteodystrophy (AHO), but normal activity of the stimulatory protein G (Gs alpha).","definition_xrefs":["Orphanet:79444"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"excluded_subClassOf","term_name":"dermis disorder","termid":"MONDO:0021154"},{"relation_name":"is_a","term_name":"primary avascular necrosis","termid":"MONDO:0018379"},{"relation_name":"is_a","term_name":"osteonecrosis of genetic origin","termid":"MONDO:0018383"},{"relation_name":"is_a","term_name":"acromelic dysplasia","termid":"MONDO:0019695"},{"relation_name":"is_a","term_name":"pseudohypoparathyroidism","termid":"MONDO:0019992"},{"relation_name":"is_a","term_name":"disorder of GNAS inactivation","termid":"MONDO:0800466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005240"],"is_obsolete":false,"name":"pseudohypoparathyroidism type 1C","secondary_identifiers":["MEDGEN:420958","UMLS:C2932716","NANDO:1201077","GARD:10681","icd11.foundation:1401673748","OMIM:612462","MESH:C548076","SCTID:717792007"],"synonyms":[{"name":"PHP1C","type":"related"},{"name":"Php 1C","type":"related"},{"name":"pseudohypoparathyroidism Ic","type":"exact"},{"name":"pseudohypoparathyroidism, type 1C","type":"related"},{"name":"pseudohypoparathyroidism, type IC","type":"related"}],"termid":"MONDO:0012911","xrefs":{"Monarch":{"xref_id":"0012911"}}}


id: PBO:0073226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"semenogelin 2","termid":"PBO:0073226"}


id: GO:0002778
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis or release of an antibacterial peptide during an immune response, resulting in an increase in intracellular or extracellular levels.","definition_xrefs":["PMID:15638771","GOC:add","ISBN:0781735149","PMID:11807545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antimicrobial peptide production","termid":"GO:0002775"},{"relation_name":"part_of","term_name":"antibacterial humoral response","termid":"GO:0019731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"antibacterial peptide production","termid":"GO:0002778"}


id: PBO:0040659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bardet-Biedl syndrome 4","termid":"PBO:0040659"}


id: PBO:0061666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 50","termid":"PBO:0061666"}


id: PBO:0083501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene YOR136W; null mutant displays increased levels of spontaneous Rad52 foci","termid":"PBO:0083501"}


id: GO:2000216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of L-proline metabolic process.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amino acid metabolic process","termid":"GO:0045764"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of L-proline metabolic process","termid":"GO:2000214"},{"relation_name":"positively_regulates","term_name":"proline metabolic process","termid":"GO:0006560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"positive regulation of L-proline metabolic process","synonyms":[{"name":"positive regulation of proline metabolic process","type":"broad"},{"name":"positive regulation of proline metabolism","type":"exact"}],"termid":"GO:2000216"}


id: PBO:0034429
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitochondrial_crista_morphology","termid":"PBO:0034429"}


id: PBO:0083852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Exosome non-catalytic core component; involved in 3'-5' RNA processing and degradation in both the nucleus and the cytoplasm; predicted to contain an S1 RNA binding domain; human homolog EXOSC1 partially complements yeast csl4 null mutant, and can complement inviability of strain in which expression of CSL4 is repressed","termid":"PBO:0083852"}


id: GO:2000928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellodextrin catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"negative regulation of cellodextrin metabolic process","termid":"GO:2000925"},{"relation_name":"is_a","term_name":"regulation of cellodextrin catabolic process","termid":"GO:2000927"},{"relation_name":"negatively_regulates","term_name":"cellodextrin catabolic process","termid":"GO:2000890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellodextrin catabolic process","synonyms":[{"name":"negative regulation of cellodextrin catabolism","type":"exact"}],"termid":"GO:2000928"}


id: GO:0015534
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (proline, glycine or betaine)(out) + (H+ or Na+)(out) = (proline, glycine or betaine)(in) + (H+ or Na+)(in).","definition_xrefs":["TC:2.A.1.6.4"],"gene_count":0,"genotype_count":0,"name":"obsolete proline/glycine/betaine:hydrogen/sodium symporter activity (obsolete GO:0015534)","synonyms":[{"name":"proline/glycine/betaine:hydrogen/sodium symporter activity","type":"exact"},{"name":"proline/glycine/betaine:proton/sodium symporter","type":"exact"}],"termid":"GO:0015534"}


id: FYPO:0005682
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which microtubule depolymerization, i.e. the removal of tubulin dimers, occurs to a lesser extent than normal.","definition_xrefs":["GO:0007019","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule depolymerization during vegetative growth","termid":"FYPO:0000902"},{"relation_name":"is_a","term_name":"decreased microtubule polymerization or depolymerization","termid":"FYPO:0000904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased microtubule depolymerization during vegetative growth","synonyms":[{"name":"decreased microtubule catastrophe during vegetative growth","type":"related"},{"name":"decreased microtubule depolymerisation during vegetative growth","type":"exact"},{"name":"decreased microtubule depolymerization during mitotic cell cycle","type":"related"},{"name":"decreased microtubule shrinkage during vegetative growth","type":"related"},{"name":"reduced microtubule depolymerization during vegetative growth","type":"exact"}],"termid":"FYPO:0005682"}


id: GO:0051189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a prosthetic group, the non-amino acid portion of certain protein molecules. Prosthetic groups may be inorganic or organic and are usually required for the biological activity of the protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"},{"relation_name":"part_of","term_name":"protein metabolic process","termid":"GO:0019538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prosthetic group metabolic process","synonyms":[{"name":"coenzyme and prosthetic group metabolic process","type":"broad"},{"name":"coenzyme and prosthetic group metabolism","type":"broad"},{"name":"prosthetic group metabolism","type":"exact"}],"termid":"GO:0051189"}


id: GO:0061540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of octopamine by a cell, in which the octopamine acts as a neurotransmitter.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter secretion","termid":"GO:0007269"},{"relation_name":"is_a","term_name":"octopamine secretion","termid":"GO:0061539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"octopamine secretion, neurotransmission","termid":"GO:0061540"}


id: PBO:0075812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSBP3 pseudogene 1","termid":"PBO:0075812"}


id: PBO:0074445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 46","termid":"PBO:0074445"}


id: GO:0102843
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 1-acyl-2-hexadecanoyl-glycerolipid + 2 H+ + O2 + 2 reduced [2Fe-2S]-[ferredoxin] = a 1-acyl-2-[(7Z)-hexadecenoyl]-glycerolipid + 2 H2O + 2 oxidized [2Fe-2S]-[ferredoxin].","definition_xrefs":["RHEA:46756"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"palmitoyl-[glycerolipid] 7-desaturase activity","secondary_identifiers":["MetaCyc:RXN-16048","EC:1.14.19.42"],"synonyms":[{"name":"1-18:2-2-16:0-monogalactosyldiacylglycerol desaturase activity (SN2-16:1 forming)","type":"exact"}],"termid":"GO:0102843"}


id: GO:1901868
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ecgonine methyl ester.","definition_xrefs":["GOC:TermGenie","PMID:22665766"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkaloid catabolic process","termid":"GO:0009822"},{"relation_name":"is_a","term_name":"ecgonine methyl ester metabolic process","termid":"GO:1901867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ecgonine methyl ester catabolic process","synonyms":[{"name":"ecgonine methyl ester breakdown","type":"exact"},{"name":"ecgonine methyl ester catabolism","type":"exact"},{"name":"ecgonine methyl ester degradation","type":"exact"}],"termid":"GO:1901868"}


id: MONDO:0010376
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Brooks-Wisniewski-brown syndrome (obsolete MONDO:0010376)","termid":"MONDO:0010376","xrefs":{"Monarch":{"xref_id":"0010376"}}}


id: MONDO:1012188
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nephropathy, non-human animal","termid":"MONDO:1011907"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nephropathy, sheep","secondary_identifiers":["OMIA:000710-9940"],"termid":"MONDO:1012188","xrefs":{"Monarch":{"xref_id":"1012188"}}}


id: PR:P87214
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A uroporphyrinogen-III synthase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12390:SF0","OMA:SCHPO01252","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroporphyrinogen-III synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31G5.08","secondary_identifiers":["UniProtKB:P87214"],"synonyms":[{"name":"Spom972h-UROS","type":"exact"},{"name":"UROIIIS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"UROS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"hydroxymethylbilane hydrolyase [cyclizing] (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"uroporphyrinogen-III cosynthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87214"}


id: MONDO:0020222
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare disease with glaucoma as a major feature (obsolete MONDO:0020222)","secondary_identifiers":["Orphanet:98638"],"termid":"MONDO:0020222","xrefs":{"Monarch":{"xref_id":"0020222"}}}


id: PBO:0084419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Major exo-1,3-beta-glucanase of the cell wall; involved in cell wall beta-glucan assembly; exists as three differentially glycosylated isoenzymes; EXG1 has a paralog, SPR1, that arose from the whole genome duplication","termid":"PBO:0084419"}


id: MONDO:0054573
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lopes-Maciel-Rodan syndrome","secondary_identifiers":["MEDGEN:1379711","EFO:0009904","UMLS:C4479491","OMIM:617435"],"synonyms":[{"name":"LOMARS","type":"related"},{"name":"Lopes-Maciel-Rodan syndrome","type":"exact"}],"termid":"MONDO:0054573","xrefs":{"Monarch":{"xref_id":"0054573"}}}


id: PBO:0057786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3074","termid":"PBO:0057786"}


id: PBO:0068207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 514","termid":"PBO:0068207"}


id: MONDO:0018191
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete tumor of testis and paratestis (obsolete MONDO:0018191)","secondary_identifiers":["Orphanet:363472"],"synonyms":[{"name":"testicular and paratesticular tumor","type":"exact"},{"name":"testicular and paratesticular tumour","type":"exact"}],"termid":"MONDO:0018191","xrefs":{"Monarch":{"xref_id":"0018191"}}}


id: PBO:0055244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2671","termid":"PBO:0055244"}


id: PBO:0080986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZBTB20 antisense RNA 2","termid":"PBO:0080986"}


id: PBO:0029755
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_modification","termid":"PBO:0029755"}


id: PBO:0051313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1/OR2-9 (pseudogene)","termid":"PBO:0051313"}


id: GO:1902298
data:
  {"annotated_genes":["SJAG_01221","SJAG_01644","SJAG_02439","SJAG_02822","SJAG_01832","SJAG_02198","SJAG_01374","SJAG_02214","SJAG_03843","SJAG_02079","SJAG_06022","SJAG_01076","SJAG_02610","SJAG_02992","SJAG_01584","SJAG_03780","SJAG_01410","SJAG_01677","SJAG_03898","SJAG_00573","SJAG_04272","SJAG_03300"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98963,114598],"is_not":false,"summary":null,"term":"GO:1902298"},{"annotations":[110968,113613],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990505"},{"annotations":[92763,65122,109566,90983,118666,110924,97830,97996,96887,109590,100058,111403,100765,114376,96646],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990426"},{"annotations":[118278,107963,90813],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0120292"}]},"cv_name":"biological_process","definition":"Any maintenance of fidelity that is involved in cell cycle DNA replication.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"is_a","term_name":"DNA-templated DNA replication maintenance of fidelity","termid":"GO:0045005"},{"relation_name":"part_of","term_name":"cell cycle DNA replication","termid":"GO:0044786"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00573":null,"SJAG_01076":null,"SJAG_01221":null,"SJAG_01374":null,"SJAG_01410":null,"SJAG_01584":null,"SJAG_01644":null,"SJAG_01677":null,"SJAG_01832":null,"SJAG_02079":null,"SJAG_02198":null,"SJAG_02214":null,"SJAG_02439":null,"SJAG_02610":null,"SJAG_02822":null,"SJAG_02992":null,"SJAG_03300":null,"SJAG_03780":null,"SJAG_03843":null,"SJAG_03898":null,"SJAG_04272":null,"SJAG_06022":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0006259","GO:0006260","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"cell cycle DNA replication maintenance of fidelity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"maintenance of fidelity during DNA-dependent DNA replication involved in cell cycle DNA replication","type":"related"},{"name":"maintenance of fidelity involved in cell cycle DNA replication","type":"exact"}],"termid":"GO:1902298","terms_by_termid":{"GO:0120292":null,"GO:1902298":null,"GO:1990426":null,"GO:1990505":null}}


id: PBO:0034735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil protein involved in septum formation Rng10","termid":"PBO:0034735"}


id: PBO:0062861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orthopedia homeobox","termid":"PBO:0062861"}


id: PBO:0050611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HSD17B3 antisense RNA 1","termid":"PBO:0050611"}


id: MONDO:0008567
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid gland papillary carcinoma","termid":"MONDO:0005075"},{"relation_name":"is_a","term_name":"familial nonmedullary thyroid carcinoma","termid":"MONDO:0017896"},{"relation_name":"is_a","term_name":"NKX2-1 related choreoathetosis and congenital hypothyroidism with or without pulmonary dysfunction","termid":"MONDO:0100520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"thyroid cancer, nonmedullary, 1","secondary_identifiers":["UMLS:C4721429","MEDGEN:1648293","OMIM:188550"],"synonyms":[{"name":"NMTC1","type":"related"},{"name":"familial nonmedullary thyroid cancer, papillary","type":"related"},{"name":"nonmedullary thyroid carcinoma, papillary","type":"related"},{"name":"papillary carcinoma of thyroid","type":"related"},{"name":"thyroid cancer, nonmedullary, 1","type":"exact"},{"name":"thyroid cancer, nonmedullary, type 1","type":"exact"}],"termid":"MONDO:0008567","xrefs":{"Monarch":{"xref_id":"0008567"}}}


id: GO:0006795
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phosphorus utilization.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphorus metabolic process","termid":"GO:0051174"},{"relation_name":"regulates","term_name":"phosphorus utilization","termid":"GO:0006794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of phosphorus utilization","termid":"GO:0006795"}


id: MONDO:0008381
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A retinitis pigmentosa that is characterized pigmentary retinal degeneration with onset in the teens leading to blindness in the sixth ans seventh decades of life.","definition_xrefs":["PMID:3618160","DOID:0110420"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066","MONDO:0005328"],"is_obsolete":false,"name":"dominant pericentral pigmentary retinopathy","secondary_identifiers":["GARD:15111","ICD10CM:H35.5","MEDGEN:357237","MESH:C566713","OMIM:180210","UMLS:C1867261"],"synonyms":[{"name":"retinopathy, pericentral pigmentary, dominant","type":"related"}],"termid":"MONDO:0008381","xrefs":{"Monarch":{"xref_id":"0008381"}}}


id: GO:0047621
data:
  {"annotated_genes":["SJAG_00493"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108617],"is_not":false,"summary":null,"term":"GO:0047621"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3-acylpyruvate + H2O = a carboxylate + pyruvate.","definition_xrefs":["RHEA:19009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","termid":"GO:0016823"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00493":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"acylpyruvate hydrolase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:ACYLPYRUVATE-HYDROLASE-RXN","UM-BBD_reactionID:r1401","EC:3.7.1.5"],"synonyms":[{"name":"3-acylpyruvate acylhydrolase activity","type":"related"}],"termid":"GO:0047621","terms_by_termid":{"GO:0047621":null}}


id: PBO:0078208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 7-1 (non-functional)","termid":"PBO:0078208"}


id: PR:O74476
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sal3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74476"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"importin subunit beta-3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1840.03","synonyms":[{"name":"Spom972h-sal3","type":"exact"},{"name":"importin beta sal3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74476"}


id: GO:0045713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of low-density lipoprotein receptors, cell surface proteins that mediate the endocytosis of low-density lipoprotein particles by cells.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete low-density lipoprotein particle receptor biosynthetic process (obsolete GO:0045713)","synonyms":[{"name":"LDLr biosynthesis","type":"exact"},{"name":"LDLr biosynthetic process","type":"exact"},{"name":"low-density lipoprotein receptor anabolism","type":"exact"},{"name":"low-density lipoprotein receptor biosynthesis","type":"exact"},{"name":"low-density lipoprotein receptor biosynthetic process","type":"exact"},{"name":"low-density lipoprotein receptor formation","type":"exact"},{"name":"low-density lipoprotein receptor synthesis","type":"exact"}],"termid":"GO:0045713"}


id: GO:0097553
data:
  {"annotated_genes":["SJAG_00296","SJAG_01090","SJAG_05229","SJAG_03850","SJAG_04551","SJAG_02877","SJAG_04668","SJAG_03631"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[68221,76193,116298,94213],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098703"},{"annotations":[115220,93031],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905949"},{"annotations":[103964],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905665"},{"annotations":[110508],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061454"}]},"cv_name":"biological_process","definition":"A process in which a calcium ion is transported from one side of a membrane to the other into the cytosol by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium ion transmembrane transport","termid":"GO:0070588"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_01090":null,"SJAG_02877":null,"SJAG_03631":null,"SJAG_03850":null,"SJAG_04551":null,"SJAG_04668":null,"SJAG_05229":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"calcium ion transmembrane import into cytosol","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0060401"],"synonyms":[{"name":"calcium transmembrane import into cytosol","type":"broad"},{"name":"cytosolic calcium ion transport","type":"broad"}],"termid":"GO:0097553","terms_by_termid":{"GO:0061454":null,"GO:0098703":null,"GO:1905665":null,"GO:1905949":null}}


id: FYPO:0000915
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of pyruvate dehydrogenase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000661","FYPO:0001985","FYPO:0000654","FYPO:0000707"],"is_obsolete":false,"name":"abnormal pyruvate dehydrogenase activity","synonyms":[{"name":"abnormal PDH activity","type":"exact"}],"termid":"FYPO:0000915"}


id: MONDO:0006101
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Bartholin gland squamous cell carcinoma (obsolete MONDO:0006101)","termid":"MONDO:0006101","xrefs":{"Monarch":{"xref_id":"0006101"}}}


id: PBO:0034276
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-developmentally_succeeded_by","termid":"PBO:0034276"}


id: PR:Q10151
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1D4.05c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein ERD1 homolog 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1D4.05c","synonyms":[{"name":"Spom972h-SPAC1D4.05c","type":"exact"}],"termid":"PR:Q10151"}


id: PBO:0067598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 761, pseudogene","termid":"PBO:0067598"}


id: FYPO:0004428
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of mitotic cytokinesis is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytokinesis during vegetative growth","termid":"FYPO:0000032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000631","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000032"],"is_obsolete":false,"name":"increased rate of cytokinesis","synonyms":[{"name":"increased rate of cytokinesis during mitotic cell cycle","type":"related"},{"name":"increased rate of cytokinesis during vegetative growth","type":"exact"},{"name":"increased rate of mitotic cytokinesis","type":"exact"}],"termid":"FYPO:0004428"}


id: MONDO:0017611
data:
  {"annotated_genes":["SJAG_03429"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88524],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009050"}]},"cv_name":"mondo","definition":"A benign or malignant neoplasm affecting the pituitary gland. The vast majority are adenomas arising from the anterior lobe of the pituitary gland.","definition_xrefs":["NCIT:C3330"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine gland neoplasm","termid":"MONDO:0002082"},{"relation_name":"is_a","term_name":"sella turcica neoplasm","termid":"MONDO:0002720"},{"relation_name":"is_a","term_name":"pituitary gland disorder","termid":"MONDO:0003381"},{"relation_name":"is_a","term_name":"reproductive system neoplasm","termid":"MONDO:0006054"},{"relation_name":"is_a","term_name":"hypothalamic neoplasm","termid":"MONDO:0006799"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03429":null},"genotype_count":0,"is_obsolete":false,"name":"pituitary tumor","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:239.7","MEDGEN:19326","Orphanet:304055","SCTID:127024001","UMLS:C0032019","GARD:21253"],"synonyms":[{"name":"neoplasm of pituitary","type":"exact"},{"name":"neoplasm of pituitary gland","type":"exact"},{"name":"neoplasm of the pituitary","type":"exact"},{"name":"neoplasm of the pituitary gland","type":"exact"},{"name":"pituitary gland neoplasm","type":"exact"},{"name":"pituitary gland tumor","type":"exact"},{"name":"pituitary gland tumour","type":"exact"},{"name":"pituitary neoplasm","type":"exact"},{"name":"pituitary tumor","type":"exact"},{"name":"tumor of pituitary","type":"exact"},{"name":"tumor of pituitary gland","type":"exact"},{"name":"tumor of the pituitary","type":"exact"},{"name":"tumor of the pituitary gland","type":"exact"},{"name":"tumour of pituitary","type":"exact"},{"name":"tumour of pituitary gland","type":"exact"},{"name":"tumour of the pituitary","type":"exact"},{"name":"tumour of the pituitary gland","type":"exact"}],"termid":"MONDO:0017611","terms_by_termid":{"MONDO:0009050":null},"xrefs":{"Monarch":{"xref_id":"0017611"}}}


id: PR:O13698
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A malonyl-CoA-acyl carrier protein transacylase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01650","PANTHER:PTHR10982:SF4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malonyl CoA-acyl carrier protein transacylase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11G7.05c","secondary_identifiers":["UniProtKB:O13698"],"synonyms":[{"name":"MCT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-MCAT","type":"exact"},{"name":"malonyl-CoA:ACP transferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13698"}


id: PBO:0003284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle pole body protein Kms2","termid":"PBO:0003284"}


id: GO:0034729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by addition of a methyl group to lysine at position 79 of the histone.","definition_xrefs":["GOC:se"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K79 methylation (obsolete GO:0034729)","synonyms":[{"name":"histone H3 K79 methylation","type":"exact"},{"name":"histone H3K79me","type":"exact"},{"name":"histone lysine H3 K79 methylation","type":"exact"}],"termid":"GO:0034729"}


id: PBO:0045476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartate rich 1","termid":"PBO:0045476"}


id: GO:0036438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process in which the lens is maintained in a highly refractive, transparent state to allow for optimal focusing of light on the retina.","definition_xrefs":["PMID:22095752","GOC:nhn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue homeostasis","termid":"GO:0001894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of lens transparency","synonyms":[{"name":"maintenance of ocular lens transparency","type":"exact"},{"name":"preservation of lens transparency","type":"exact"}],"termid":"GO:0036438"}


id: MONDO:0008913
data:
  {"annotated_genes":["SJAG_01519"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86789],"is_not":false,"summary":null,"term":"MONDO:0008913"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"},{"relation_name":"is_a","term_name":"cardiac valvular defect","termid":"MONDO:0031323"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01519":null},"genotype_count":0,"is_obsolete":false,"name":"cardiac valvular defect, developmental","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:212093","DOID:0080633","MEDGEN:1823949","MESH:C565882","UMLS:C5774175"],"synonyms":[{"name":"CARDIAC valvular defect, developmental","type":"related"},{"name":"CVDD","type":"related"},{"name":"cardiac valvular defect, developmental","type":"exact"}],"termid":"MONDO:0008913","terms_by_termid":{"MONDO:0008913":null},"xrefs":{"Monarch":{"xref_id":"0008913"}}}


id: PBO:0066206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 20","termid":"PBO:0066206"}


id: PBO:0055160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2579","termid":"PBO:0055160"}


id: PBO:0041166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTG2 divergent transcript","termid":"PBO:0041166"}


id: GO:0034470
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in the conversion of one or more primary non-coding RNA (ncRNA) transcripts into one or more mature ncRNA molecules.","definition_xrefs":["GOC:mah","PMID:27573892"],"gene_count":0,"genotype_count":0,"name":"obsolete ncRNA processing (obsolete GO:0034470)","termid":"GO:0034470"}


id: MONDO:0018544
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A peroxisomal disorder resulting in cerebral demyelination, axonal dysfunction in the spinal cord leading to spastic paraplegia, adrenal insufficiency and in some cases testicular insufficiency.","definition_xrefs":["Orphanet:43"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"chronic primary adrenal insufficiency","termid":"MONDO:0015129"},{"relation_name":"excluded_subClassOf","term_name":"disorder of peroxisomal beta oxidation","termid":"MONDO:0019233"},{"relation_name":"is_a","term_name":"X-linked disease","termid":"MONDO:0000425"},{"relation_name":"is_a","term_name":"adrenal gland disorder","termid":"MONDO:0005495"},{"relation_name":"is_a","term_name":"hereditary dementia","termid":"MONDO:0015547"},{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"},{"relation_name":"is_a","term_name":"disorder of peroxisomal transporter","termid":"MONDO:0100372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0019053","MONDO:0005559","MONDO:0005066"],"is_obsolete":false,"name":"adrenoleukodystrophy","secondary_identifiers":["SCTID:49692006","NORD:736","UMLS:C0162309","MEDGEN:57667","GARD:5758","DOID:10588","icd11.foundation:1085655586","ICD9:341.1","MedDRA:10051260","NANDO:2200576","NCIT:C61252","OMIM:300100","MESH:D000326","NANDO:1200165"],"synonyms":[{"name":"ABCD1 deficiency","type":"exact"},{"name":"ALD","type":"exact"},{"name":"Bronze-Schilder disease","type":"exact"},{"name":"Siemerling-Creutzfeldt disease","type":"exact"},{"name":"X-ALD","type":"exact"},{"name":"X-Linked Adrenoleukodystrophy","type":"exact"},{"name":"X-linked ALD","type":"exact"},{"name":"X-linked adrenoleukodystrophy","type":"exact"},{"name":"adrenoleukodystrophy","type":"exact"},{"name":"adrenoleukodystrophy, X-linked","type":"exact"},{"name":"adrenoleukodystrophy, X-linked recessive","type":"exact"},{"name":"adrenomyeloneuropathy, adult","type":"exact"},{"name":"adrenomyeloneuropathy, adult, X-linked recessive","type":"exact"},{"name":"diffuse cerebral sclerosis of Schilder","type":"exact"},{"name":"diffuse sclerosis","type":"related"},{"name":"encephalitis periaxialis concentrica","type":"exact"},{"name":"encephalitis periaxialis, Schilder's","type":"exact"},{"name":"sudanophilic cerebral sclerosis","type":"exact"}],"termid":"MONDO:0018544","xrefs":{"Monarch":{"xref_id":"0018544"}}}


id: MONDO:0007932
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An age related macular degeneration conferred by variation in the ABCA4 gene on chromosome 1p22.","definition_xrefs":["DOID:0110015","PMID:10396622"],"direct_ancestors":[{"relation_name":"is_a","term_name":"age-related macular degeneration","termid":"MONDO:0005150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"age related macular degeneration 2","secondary_identifiers":["MEDGEN:501183","UMLS:C3495438","MESH:C562479","OMIM:153800"],"synonyms":[{"name":"ARMD2","type":"exact"},{"name":"age related macular degeneration type 2","type":"exact"},{"name":"macular Degeneration, Senile","type":"related"},{"name":"macular Degeneration, age-related, type 2","type":"exact"},{"name":"macular degeneration, age-related, 2","type":"related"},{"name":"maculopathy, age-related, 2","type":"related"}],"termid":"MONDO:0007932","xrefs":{"Monarch":{"xref_id":"0007932"}}}


id: GO:0090220
data:
  {"annotated_genes":["SJAG_01777","SJAG_05196","SJAG_05226","SJAG_05260","SJAG_00756","SJAG_01538","SJAG_01263","SJAG_03092","SJAG_03685","SJAG_03680","SJAG_03287"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91580,65551],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070197"},{"annotations":[106936,89209,101744,91581,104642],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032121"},{"annotations":[117805,119562,119424,98531],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045141"},{"annotations":[115846],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044821"}]},"cv_name":"biological_process","definition":"The directed movement of a chromosome to the nuclear envelope that contributes to homologous chromosome segregation and precedes synapsis.","definition_xrefs":["GOC:ascb_2009","GOC:tb","PMID:19913287","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome localization","termid":"GO:0050000"},{"relation_name":"part_of","term_name":"homologous chromosome segregation","termid":"GO:0045143"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00756":null,"SJAG_01263":null,"SJAG_01538":null,"SJAG_01777":null,"SJAG_03092":null,"SJAG_03287":null,"SJAG_03680":null,"SJAG_03685":null,"SJAG_05196":null,"SJAG_05226":null,"SJAG_05260":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0051179","GO:0140013"],"is_obsolete":false,"name":"chromosome localization to nuclear envelope involved in homologous chromosome segregation","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"chromosome localisation to nuclear envelope involved in homologous chromosome segregation","type":"exact"}],"termid":"GO:0090220","terms_by_termid":{"GO:0032121":null,"GO:0044821":null,"GO:0045141":null,"GO:0070197":null}}


id: MONDO:0016694
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Pituicytoma (obsolete MONDO:0016694)","termid":"MONDO:0016694","xrefs":{"Monarch":{"xref_id":"0016694"}}}


id: PBO:0034816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1D family exosome subunit Cti1","termid":"PBO:0034816"}


id: PBO:0027219
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cytosolic_monomeric_ribosome_level","termid":"PBO:0027219"}


id: GO:0039606
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts translation initiation in its host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host gene expression","termid":"GO:0039656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host translation initiation","synonyms":[{"name":"suppression by virus of host translation initiation","type":"narrow"}],"termid":"GO:0039606"}


id: PBO:0051191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3/OR16-9 (non-functional)","termid":"PBO:0051191"}


id: GO:0043606
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving formamide, the simplest amide, HCONH2, derived from formic acid.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formamide metabolic process","synonyms":[{"name":"formamide metabolism","type":"exact"}],"termid":"GO:0043606"}


id: PBO:0052284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinase insert domain receptor","termid":"PBO:0052284"}


id: PBO:0029004
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_S_phase_progression","termid":"PBO:0029004"}


id: PBO:0090107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GDP dissociation inhibitor Rdi1","termid":"PBO:0090107"}


id: PBO:0035914
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_chromatin_during_mitotic_G1_phase","termid":"PBO:0035914"}


id: PBO:0059299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L48","termid":"PBO:0059299"}


id: GO:0070475
data:
  {"annotated_genes":["SJAG_02024","SJAG_02417","SJAG_01958","SJAG_03008","SJAG_03877","SJAG_02281"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77361,80007,80408,80684,81345],"is_not":false,"summary":null,"term":"GO:0070475"},{"annotations":[81874],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070476"}]},"cv_name":"biological_process","definition":"The addition of a methyl group to an atom in the nucleoside base portion of a nucleotide residue in an rRNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA methylation","termid":"GO:0031167"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01958":null,"SJAG_02024":null,"SJAG_02281":null,"SJAG_02417":null,"SJAG_03008":null,"SJAG_03877":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0010467","GO:0008150","GO:0042254"],"is_obsolete":false,"name":"rRNA base methylation","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0070475","terms_by_termid":{"GO:0070475":null,"GO:0070476":null}}


id: MONDO:0001382
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hepatorenal syndrome is a form of impaired kidney function that occurs in individuals with advanced chronic liver disease. As many as 40% of individuals with cirrhosis and ascites will develop hepatorenal syndrome. Symptoms may include fatigue, abdominal pain, and a general feeling of ill health (malaise). There are two distinct types of hepatorenal syndrome. Type I progresses quickly (within days), leading to kidney failure. Individuals with type I typically have dramatically reduced urine output, edema, and jaundice, and often suffer from hepatic encephalopathy. Type II progresses more slowly, over weeks or months, and the symptoms are less severe. The cause of hepatorenal syndrome is unknown. A contributing factor seems to be a narrowing of the blood vessels that connect into the kidneys. This causes a decrease in blood flow to the kidneys, impairing their function. In some cases, triggers or precipitating factors (infections, blood loss from the gastrointestinal tract, low blood pressure) are involved. Treatment is aimed at helping the liver work better and maintaining kidney function. In many cases, a liver transplant is needed. In some cases, individuals also need a kidney transplant.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"acute kidney failure","termid":"MONDO:0002492"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"liver disorder","termid":"MONDO:0005154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"hepatorenal syndrome","secondary_identifiers":["DOID:11823","MESH:D006530","NCIT:C113400","ICD9:572.4","SCTID:51292008","ICD10CM:K76.7","UMLS:C0019212","icd11.foundation:1015890899","MEDGEN:9224"],"synonyms":[{"name":"hepato-renal syndrome","type":"related"}],"termid":"MONDO:0001382","xrefs":{"Monarch":{"xref_id":"0001382"}}}


id: GO:0010129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cyclohexane-1-carboxylate, a alicyclic acid, in the absence of oxygen.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anaerobic cyclohexane-1-carboxylate catabolic process","secondary_identifiers":["MetaCyc:PWY-301"],"synonyms":[{"name":"anaerobic cyclohexane-1-carboxylate breakdown","type":"exact"},{"name":"anaerobic cyclohexane-1-carboxylate catabolism","type":"exact"},{"name":"anaerobic cyclohexane-1-carboxylate degradation","type":"exact"}],"termid":"GO:0010129"}


id: MONDO:0005545
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infectious process in which the bacteria Staphylococcus aureus is present.","definition_xrefs":["NCIT:C122576"],"direct_ancestors":[{"relation_name":"is_a","term_name":"staphylococcal infection","termid":"MONDO:0024313"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"staphylococcus aureus infection","secondary_identifiers":["EFO:0005681","SCTID:406602003","UMLS:C1318973","MEDGEN:232934"],"termid":"MONDO:0005545","xrefs":{"Monarch":{"xref_id":"0005545"}}}


id: GO:0008548
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: GTP + H2O = GDP + phosphate. Activity is associated with the signal-recognition particle, a protein and RNA-containing structure involved in endoplasmic reticulum-associated protein synthesis.","definition_xrefs":["MetaCyc:3.6.1.49-RXN","EC:3.6.5.4"],"gene_count":0,"genotype_count":0,"name":"obsolete signal-recognition-particle GTPase activity (obsolete GO:0008548)","synonyms":[{"name":"signal-recognition-particle GTPase activity","type":"exact"}],"termid":"GO:0008548"}


id: MONDO:0010038
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Growth delay due to IGF-I resistance is characterized by variable intrauterine and postnatal growth retardation and elevated serum IGF-I levels. Addition features include variable degrees of intellectual deficit, microcephaly and dysmorphism (broad nasal bridge and tip, smooth philtrum, thin upper and everted lower lips, short fingers, clinodactyly, wide-set nipples and pectus excavatum).","definition_xrefs":["Orphanet:73273"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"growth hormone insensitivity syndrome","termid":"MONDO:0015892"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth delay due to insulin-like growth factor I resistance","secondary_identifiers":["MEDGEN:338622","UMLS:C1849157","MESH:C564816","SCTID:715625007","icd11.foundation:272435490","OMIM:270450","GARD:10609","NANDO:2200320"],"synonyms":[{"name":"IGF-1 resistance","type":"related"},{"name":"IGF-I resistance","type":"related"},{"name":"IGF1RES","type":"related"},{"name":"Somatomedin end-organ insensitivity to","type":"related"},{"name":"Somatomedin, end-organ insensitivity to","type":"related"},{"name":"Somatomedin-C, resistance to","type":"related"},{"name":"Somatomedin-c resistance to","type":"related"},{"name":"growth delay due to insulin-like growth factor I resistance","type":"exact"},{"name":"insulin-like Growth Factor I, resistance to, due to increased binding Protein","type":"related"},{"name":"insulin-like growth factor 1 resistance to","type":"related"},{"name":"insulin-like growth factor I, resistance to","type":"related"},{"name":"resistance to IGF-1","type":"exact"}],"termid":"MONDO:0010038","xrefs":{"Monarch":{"xref_id":"0010038"}}}


id: MONDO:0011956
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autism, susceptiblity to","termid":"MONDO:0020836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autism, susceptibility to, 3","secondary_identifiers":["OMIM:608049","MEDGEN:334211","UMLS:C1842632"],"synonyms":[{"name":"AUTS3","type":"exact"},{"name":"autism susceptibility 3, isolated cases","type":"exact"},{"name":"autism, susceptibility to, 3","type":"exact"}],"termid":"MONDO:0011956","xrefs":{"Monarch":{"xref_id":"0011956"}}}


id: FYPO:0002231
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which a cell undergoes one or a few rounds of cell division before cells die, resulting in the formation a colony that contains only a few inviable cells that are curved along the long axis. Up to 6 rounds of cell division (generating 64 cells) may be observed, but 3 divisions or fewer is more typical.","definition_xrefs":["PomBase:mah","PomBase:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable microcolony, curved cells (obsolete FYPO:0002231)","synonyms":[{"name":"inviable microcolony, curved vegetative cells","type":"exact"}],"termid":"FYPO:0002231"}


id: GO:0002537
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis or release of nitric oxide following a stimulus as part of an inflammatory response, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"production of molecular mediator involved in inflammatory response","termid":"GO:0002532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nitric oxide production involved in inflammatory response","synonyms":[{"name":"nitric oxide production involved in acute inflammatory response","type":"broad"},{"name":"production of nitric oxide involved in acute inflammatory response","type":"broad"},{"name":"production of nitric oxide involved in inflammatory response","type":"exact"}],"termid":"GO:0002537"}


id: GO:0070790
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of phialides over time, from its formation to the mature structure. Phialides are specialized cells that bud from the ends of metulae on the conidiophore tip. Chains of conidia, or asexual spores, develop from the phialide tips.","definition_xrefs":["PMID:9529886"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"conidiophore development","termid":"GO:0070787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phialide development","synonyms":[{"name":"development of secondary sterigmata","type":"exact"}],"termid":"GO:0070790"}


id: MONDO:0000517
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A medulloblastoma that involves the brainstem.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"brainstem cancer","termid":"MONDO:0002912"},{"relation_name":"is_a","term_name":"medulloblastoma","termid":"MONDO:0007959"},{"relation_name":"is_a","term_name":"brainstem neoplasm","termid":"MONDO:0021228"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain stem medulloblastoma","secondary_identifiers":["DOID:0050899"],"synonyms":[{"name":"brainstem medulloblastoma","type":"exact"},{"name":"medulloblastoma of brainstem","type":"exact"}],"termid":"MONDO:0000517","xrefs":{"Monarch":{"xref_id":"0000517"}}}


id: GO:0060434
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the bronchus is generated and organized. The bronchus is the portion of the airway that connects to the lungs.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"is_a","term_name":"tube morphogenesis","termid":"GO:0035239"},{"relation_name":"part_of","term_name":"bronchus development","termid":"GO:0060433"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bronchus morphogenesis","termid":"GO:0060434"}


id: GO:0030970
data:
  {"annotated_genes":["SJAG_00530","SJAG_03345"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77353,80851],"is_not":false,"summary":null,"term":"GO:0030970"}]},"cv_name":"biological_process","definition":"The directed movement of unfolded or misfolded proteins from the endoplasmic reticulum to the cytosol through the translocon.","definition_xrefs":["PMID:11994744"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein exit from endoplasmic reticulum","termid":"GO:0032527"},{"relation_name":"is_a","term_name":"endoplasmic reticulum to cytosol transport","termid":"GO:1903513"},{"relation_name":"part_of","term_name":"ERAD pathway","termid":"GO:0036503"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00530":null,"SJAG_03345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0051179","GO:0030163","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"retrograde protein transport, ER to cytosol","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"protein dislocation from ER","type":"exact"},{"name":"protein retrotranslocation, ER to cytosol","type":"exact"},{"name":"retrograde protein transport, endoplasmic reticulum to cytosol","type":"exact"}],"termid":"GO:0030970","terms_by_termid":{"GO:0030970":null}}


id: MONDO:0012246
data:
  {"annotated_genes":["SJAG_05332","SJAG_01438"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86980,86981],"is_not":false,"summary":null,"term":"MONDO:0012246"}]},"cv_name":"mondo","definition":"Spinocerebellar ataxia type 26 (SCA26) is a very rare subtype of autosomal dominant cerebellar ataxia type III (ADCA type III) characterized by late-onset and slowly progressive cerebellar signs (gait ataxia) and eye movement abnormalities.","definition_xrefs":["Orphanet:101112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia type III","termid":"MONDO:0019793"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01438":null,"SJAG_05332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0002039","MONDO:0005559"],"is_obsolete":false,"name":"spinocerebellar ataxia type 26","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:9995","SCTID:718769009","MESH:C537203","icd11.foundation:586976339","DOID:0050975","UMLS:C1836395","MEDGEN:373077","OMIM:609306"],"synonyms":[{"name":"SCA26","type":"exact"},{"name":"spinocerebellar ataxia 26","type":"related"},{"name":"spinocerebellar ataxia type 26","type":"exact"}],"termid":"MONDO:0012246","terms_by_termid":{"MONDO:0012246":null},"xrefs":{"Monarch":{"xref_id":"0012246"}}}


id: PBO:0035849
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_serine_phosphorylation_during_mitosis","termid":"PBO:0035849"}


id: PBO:0017091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0300 family protein 6","termid":"PBO:0017091"}


id: PBO:0069082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 329, pseudogene","termid":"PBO:0069082"}


id: MONDO:0013671
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any complete hydatidiform mole in which the cause of the disease is a mutation in the KHDC3L gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"coronary artery disorder","termid":"MONDO:0005010"},{"relation_name":"is_a","term_name":"complete hydatidiform mole","termid":"MONDO:0016785"},{"relation_name":"is_a","term_name":"gestational trophoblastic neoplasm","termid":"MONDO:0018944"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydatidiform mole, recurrent, 2","secondary_identifiers":["OMIM:614293","MEDGEN:481982","UMLS:C3280352","GARD:18366"],"synonyms":[{"name":"HYDM2","type":"related"},{"name":"KHDC3L complete hydatidiform mole","type":"exact"},{"name":"complete hydatidiform mole caused by mutation in KHDC3L","type":"exact"},{"name":"hydatidiform MOLE, recurrent, 2","type":"related"},{"name":"hydatidiform Mole, complete","type":"related"},{"name":"hydatidiform Mole, recurrent, type 2","type":"exact"},{"name":"hydatidiform mole, recurrent, 2","type":"exact"}],"termid":"MONDO:0013671","xrefs":{"Monarch":{"xref_id":"0013671"}}}


id: PBO:0074735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 93","termid":"PBO:0074735"}


id: PBO:0051856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sulfur cluster assembly 1 pseudogene 2","termid":"PBO:0051856"}


id: PBO:0057287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 507","termid":"PBO:0057287"}


id: PBO:0055246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2673","termid":"PBO:0055246"}


id: MONDO:0859169
data:
  {"annotated_genes":["SJAG_03454"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88125],"is_not":false,"summary":null,"term":"MONDO:0859169"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03454":null},"genotype_count":0,"is_obsolete":false,"name":"White-Kernohan syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1785087","UMLS:C5543635","OMIM:619426"],"termid":"MONDO:0859169","terms_by_termid":{"MONDO:0859169":null},"xrefs":{"Monarch":{"xref_id":"0859169"}}}


id: PBO:0053218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galectin 16","termid":"PBO:0053218"}


id: PBO:0063292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin gamma subfamily B, 6","termid":"PBO:0063292"}


id: MONDO:1012921
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any osteogenesis imperfecta that occurs in domestic cats due to a mutation in the CREB3L1 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteogenesis imperfecta, domestic cat","termid":"MONDO:1011582"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteogenesis imperfecta, CREB3L1-related, domestic cat","secondary_identifiers":["OMIA:002533-9685"],"termid":"MONDO:1012921","xrefs":{"Monarch":{"xref_id":"1012921"}}}


id: PBO:0046143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 5 pseudogene 1","termid":"PBO:0046143"}


id: MONDO:0012564
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Polyosteolysis-hyperostosis syndrome","secondary_identifiers":["UMLS:C1835818","OMIM:610830","MESH:C563658","MEDGEN:324368"],"synonyms":[{"name":"Polyosteolysis-hyperostosis syndrome","type":"exact"},{"name":"Polyosteolysis/hyperostosis syndrome","type":"related"}],"termid":"MONDO:0012564","xrefs":{"Monarch":{"xref_id":"0012564"}}}


id: GO:0002774
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of the binding of the Fc portion of an immunoglobulin by an Fc receptor capable of inhibiting an immune effector process contributing to an immune response. The Fc portion of an immunoglobulin is its C-terminal constant region.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response-inhibiting cell surface receptor signaling pathway","termid":"GO:0002767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"Fc receptor mediated inhibitory signaling pathway","synonyms":[{"name":"Fc receptor mediated inhibitory signalling pathway","type":"exact"},{"name":"Fc-receptor mediated inhibitory signaling pathway","type":"exact"}],"termid":"GO:0002774"}


id: GO:0007006
data:
  {"annotated_genes":["SJAG_00230","SJAG_03282","SJAG_05300","SJAG_04370","SJAG_00569","SJAG_03563","SJAG_01305","SJAG_03700","SJAG_02501","SJAG_02002","SJAG_00687","SJAG_01120","SJAG_06440","SJAG_02028","SJAG_02361","SJAG_00168","SJAG_03710","SJAG_04237","SJAG_04965","SJAG_06468","SJAG_05268","SJAG_04996","SJAG_01917","SJAG_01405","SJAG_03633","SJAG_00031","SJAG_02034","SJAG_03416","SJAG_01640","SJAG_03502","SJAG_01951","SJAG_02524","SJAG_00404","SJAG_01470","SJAG_01949","SJAG_05302","SJAG_02797","SJAG_02355","SJAG_04317","SJAG_04208","SJAG_03168","SJAG_02656","SJAG_03515","SJAG_00576","SJAG_01780","SJAG_05241"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94855,98435,103101,104033,106208,107678,108039,109359,109484,111358,114877,119713],"is_not":false,"summary":null,"term":"GO:0007006"},{"annotations":[76800,91311,80363,103523,80739,109155],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042407"},{"annotations":[94298,77266],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007007"},{"annotations":[106738],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990627"},{"annotations":[106483],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990626"},{"annotations":[59124,71686],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070096"},{"annotations":[59425],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007008"},{"annotations":[118128,79524,58495,77448,75719,109426,75175,90470,104747],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045039"},{"annotations":[80289,58620,80031,80350,76218],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032979"},{"annotations":[59123,109403,112248,78347,111895,71687,100396,100045,113647],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045040"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a mitochondrial membrane, either of the lipid bilayer surrounding a mitochondrion.","definition_xrefs":["GOC:dph","GOC:mah","GOC:ai","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrion organization","termid":"GO:0007005"},{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"}],"gene_count":46,"genes_by_uniquename":{"SJAG_00031":null,"SJAG_00168":null,"SJAG_00230":null,"SJAG_00404":null,"SJAG_00569":null,"SJAG_00576":null,"SJAG_00687":null,"SJAG_01120":null,"SJAG_01305":null,"SJAG_01405":null,"SJAG_01470":null,"SJAG_01640":null,"SJAG_01780":null,"SJAG_01917":null,"SJAG_01949":null,"SJAG_01951":null,"SJAG_02002":null,"SJAG_02028":null,"SJAG_02034":null,"SJAG_02355":null,"SJAG_02361":null,"SJAG_02501":null,"SJAG_02524":null,"SJAG_02656":null,"SJAG_02797":null,"SJAG_03168":null,"SJAG_03282":null,"SJAG_03416":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_03563":null,"SJAG_03633":null,"SJAG_03700":null,"SJAG_03710":null,"SJAG_04208":null,"SJAG_04237":null,"SJAG_04317":null,"SJAG_04370":null,"SJAG_04965":null,"SJAG_04996":null,"SJAG_05241":null,"SJAG_05268":null,"SJAG_05300":null,"SJAG_05302":null,"SJAG_06440":null,"SJAG_06468":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0007005","GO:0061024"],"is_obsolete":false,"name":"mitochondrial membrane organization","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"mitochondrial membrane organisation","type":"exact"},{"name":"mitochondrial membrane organization and biogenesis","type":"related"}],"termid":"GO:0007006","terms_by_termid":{"GO:0007006":null,"GO:0007007":null,"GO:0007008":null,"GO:0032979":null,"GO:0042407":null,"GO:0045039":null,"GO:0045040":null,"GO:0070096":null,"GO:1990626":null,"GO:1990627":null}}


id: GO:1904839
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of male germ-line stem cell asymmetric division.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:19339709"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"negative regulation of asymmetric cell division","termid":"GO:0045769"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of male germ-line stem cell asymmetric division","termid":"GO:1904838"},{"relation_name":"negatively_regulates","term_name":"male germ-line stem cell asymmetric division","termid":"GO:0048133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of male germ-line stem cell asymmetric division","synonyms":[{"name":"down regulation of male germ-line stem cell asymmetric division","type":"exact"},{"name":"down regulation of male germ-line stem cell renewal","type":"exact"},{"name":"down-regulation of male germ-line stem cell asymmetric division","type":"exact"},{"name":"down-regulation of male germ-line stem cell renewal","type":"exact"},{"name":"downregulation of male germ-line stem cell asymmetric division","type":"exact"},{"name":"downregulation of male germ-line stem cell renewal","type":"exact"},{"name":"inhibition of male germ-line stem cell asymmetric division","type":"narrow"},{"name":"inhibition of male germ-line stem cell renewal","type":"narrow"},{"name":"negative regulation of male germ-line stem cell renewal","type":"exact"}],"termid":"GO:1904839"}


id: FYPO:0008221
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed during the G2/M phase of the mitotic cell cycle in which acetylation of lysine at position 56 of histone H3 is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:27268234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K56 acetylation during vegetative growth","termid":"FYPO:0008160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal histone H3-K56 acetylation during mitotic G2/M phase","termid":"FYPO:0008221"}


id: PBO:0029761
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_swollen_elongated_vegetative_cell","termid":"PBO:0029761"}


id: PBO:0005607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR46","termid":"PBO:0005607"}


id: MONDO:0859193
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"neuroocular syndrome","secondary_identifiers":["MEDGEN:1790414","UMLS:C5551362","OMIMPS:619539"],"termid":"MONDO:0859193","xrefs":{"Monarch":{"xref_id":"0859193"}}}


id: MONDO:1010935
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary generalized muscle atrophy characterized by the histological presence of rod-like inclusion bodies in skeletal muscle fibers in dogs due a variation in the NEB gene.","definition_xrefs":["PMID:27215641"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nemaline myopathy, NEB-related, dog","secondary_identifiers":["OMIA:002137-9615"],"termid":"MONDO:1010935","xrefs":{"Monarch":{"xref_id":"1010935"}}}


id: GO:0004823
data:
  {"annotated_genes":["SJAG_04738","SJAG_02015"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77611,79811],"is_not":false,"summary":null,"term":"GO:0004823"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: leucine + ATP + tRNA(Leu) = AMP + diphosphate + 2 H+ + Leu-tRNA(Leu).","definition_xrefs":["RHEA:11688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02015":null,"SJAG_04738":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0140101","GO:0003824","GO:0140098"],"is_obsolete":false,"name":"leucine-tRNA ligase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:6.1.1.4","KEGG_REACTION:R03657","Reactome:R-HSA-380200","MetaCyc:LEUCINE--TRNA-LIGASE-RXN","Reactome:R-HSA-379974"],"synonyms":[{"name":"leucine translase activity","type":"related"},{"name":"leucine-tRNA synthetase activity","type":"related"},{"name":"leucine:tRNALeu ligase (AMP-forming)","type":"related"},{"name":"leucyl-tRNA synthetase activity","type":"exact"},{"name":"leucyl-transfer RNA synthetase activity","type":"related"},{"name":"leucyl-transfer ribonucleate synthetase activity","type":"related"},{"name":"leucyl-transfer ribonucleic acid synthetase activity","type":"related"}],"termid":"GO:0004823","terms_by_termid":{"GO:0004823":null}}


id: GO:0021748
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the dorsal cochlear nucleus over time, from its formation to the mature structure.","definition_xrefs":["GOC:jid","GOC:curators","GOC:cls","GO_REF:0000021","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cochlear nucleus development","termid":"GO:0021747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal cochlear nucleus development","termid":"GO:0021748"}


id: MONDO:0008851
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autism (obsolete MONDO:0008851)","termid":"MONDO:0008851","xrefs":{"Monarch":{"xref_id":"0008851"}}}


id: GO:0021829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of oligodendrocytes from the subpallium to the cerebral cortex during forebrain development.","definition_xrefs":["GOC:cls","GOC:dgh","PMID:12626695","GOC:jid","GO_REF:0000021","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substrate-independent telencephalic tangential migration","termid":"GO:0021826"},{"relation_name":"is_a","term_name":"telencephalon glial cell migration","termid":"GO:0022030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oligodendrocyte cell migration from the subpallium to the cortex","termid":"GO:0021829"}


id: MONDO:0011195
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of Usher syndrome type I that features a novel locus for USH1, USH1E, mapping to chromosome band 21q21. It is inherited in an autosomal recessive manner.","definition_xrefs":["OMIM:602097"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Usher syndrome type 1","termid":"MONDO:0010168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Usher syndrome type 1E","secondary_identifiers":["ICD10CM:H35.5","UMLS:C1865865","MEDGEN:400865","GARD:5439","DOID:0110833"],"synonyms":[{"name":"USH1E","type":"exact"},{"name":"USHER syndrome, type IE","type":"related"},{"name":"Usher syndrome type IE","type":"exact"},{"name":"Usher syndrome, type 1E","type":"related"}],"termid":"MONDO:0011195","xrefs":{"Monarch":{"xref_id":"0011195"}}}


id: PBO:0078091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking protein particle complex 2 pseudogene 8","termid":"PBO:0078091"}


id: GO:0030285
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the synaptic vesicle membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:go_curators","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of synaptic vesicle membrane (obsolete GO:0030285)","synonyms":[{"name":"integral to synaptic vesicle membrane","type":"narrow"}],"termid":"GO:0030285"}


id: PBO:0052617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kringle containing transmembrane protein 2","termid":"PBO:0052617"}


id: PBO:0120034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial 5' to 3' DNA helicase Pif1/Pfh1 OR nuclear 5' to 3' DNA helicase Pif1/Pfh1","termid":"PBO:0120034"}


id: GO:0039688
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A DNA replication process that uses viral RNA as a template for RNA-dependent DNA polymerases (e.g. reverse transcriptase) that synthesize the new strands.","definition_xrefs":["VZ:1938","GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral DNA genome replication","termid":"GO:0039693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"viral double stranded DNA replication via reverse transcription","synonyms":[{"name":"RNA-dependent viral DNA replication","type":"related"},{"name":"dsDNA replication via RNA intermediate","type":"exact"},{"name":"viral RNA-dependent DNA replication","type":"exact"}],"termid":"GO:0039688"}


id: PBO:0068328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNF32 antisense RNA 1","termid":"PBO:0068328"}


id: GO:0060486
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a club cell. A club cell is an unciliated epithelial cell found in the respiratory and terminal bronchioles.","definition_xrefs":["GOC:dph","PMID:28144783","GOC:mtg_lung"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung epithelial cell differentiation","termid":"GO:0060487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"club cell differentiation","synonyms":[{"name":"Clara cell differentiation","type":"exact"}],"termid":"GO:0060486"}


id: GO:0060213
data:
  {"annotated_genes":["SJAG_00686","SJAG_04682","SJAG_01436"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74475,91515,106748],"is_not":false,"summary":null,"term":"GO:0060213"}]},"cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of poly(A) tail shortening of a nuclear-transcribed mRNA. Poly(A) tail shortening is the decrease in length of the poly(A) tail of an mRNA from full length to an oligo(A) length.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nuclear-transcribed mRNA poly(A) tail shortening","termid":"GO:0060211"},{"relation_name":"is_a","term_name":"positive regulation of mRNA catabolic process","termid":"GO:0061014"},{"relation_name":"positively_regulates","term_name":"nuclear-transcribed mRNA poly(A) tail shortening","termid":"GO:0000289"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00686":null,"SJAG_01436":null,"SJAG_04682":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0016071","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of nuclear-transcribed mRNA poly(A) tail shortening","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of 3' to 5' mRNA deadenylation","type":"related"},{"name":"positive regulation of mRNA deadenylation","type":"related"},{"name":"positive regulation of nuclear mRNA poly(A) tail shortening","type":"related"}],"termid":"GO:0060213","terms_by_termid":{"GO:0060213":null}}


id: MONDO:1011040
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any oculocutaneous albinism that occurs in cattle due to a mutation in the SLC45A2 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oculocutaneous albinism, non-human animal","termid":"MONDO:1012579"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oculocutaneous albinism, SLC45A2-related, cattle","secondary_identifiers":["OMIA:001821-9913"],"synonyms":[{"name":"coat color albinism, oculocutaneous type IV, cattle","type":"related"}],"termid":"MONDO:1011040","xrefs":{"Monarch":{"xref_id":"1011040"}}}


id: PBO:0078934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon CCT) 2-1","termid":"PBO:0078934"}


id: MONDO:0022926
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete daentl towsend Siegel syndrome (obsolete MONDO:0022926)","termid":"MONDO:0022926","xrefs":{"Monarch":{"xref_id":"0022926"}}}


id: GO:0000038
data:
  {"annotated_genes":["SJAG_01458","SJAG_01300","SJAG_02717","SJAG_02885","SJAG_01356"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75415,74363,105291,93764,79477],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042761"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a very long-chain fatty acid. A very long-chain fatty acid has an aliphatic tail containing more than 22 carbons.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid metabolic process","termid":"GO:0006631"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01300":null,"SJAG_01356":null,"SJAG_01458":null,"SJAG_02717":null,"SJAG_02885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"very long-chain fatty acid metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"very long chain fatty acid metabolic process","type":"exact"},{"name":"very-long-chain fatty acid metabolic process","type":"exact"},{"name":"very-long-chain fatty acid metabolism","type":"exact"}],"termid":"GO:0000038","terms_by_termid":{"GO:0042761":null}}


id: MOD:01490
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a serine residue with the Applied Biosystems iTRAQ4plex-114 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ4plex-114 reporter+balance reagent acylated residue","termid":"MOD:01485"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent O-acylated residue","termid":"MOD:01713"},{"relation_name":"is_a","term_name":"O3-acylated L-serine","termid":"MOD:02003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ4plex-114 reporter+balance reagent O3-acylated serine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"iTRAQ4plex114","type":"related"}],"termid":"MOD:01490"}


id: PBO:0058300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4674","termid":"PBO:0058300"}


id: PBO:0071180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 21","termid":"PBO:0071180"}


id: PBO:0034077
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_hypermorphosis_relationship_with","termid":"PBO:0034077"}


id: MONDO:0859346
data:
  {"annotated_genes":["SJAG_04884"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87394],"is_not":false,"summary":null,"term":"MONDO:0859346"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mosaic variegated aneuploidy syndrome","termid":"MONDO:0000141"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04884":null},"genotype_count":0,"is_obsolete":false,"name":"mosaic variegated aneuploidy syndrome 7 with inflammation and tumor predisposition","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1824057","DOID:0060982","OMIM:620189","UMLS:C5774284"],"termid":"MONDO:0859346","terms_by_termid":{"MONDO:0859346":null},"xrefs":{"Monarch":{"xref_id":"0859346"}}}


id: MONDO:1012480
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cervical vertebral compressive myelopathy, non-human animal","termid":"MONDO:1011891"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervical vertebral compressive myelopathy, mountain zebra","secondary_identifiers":["OMIA:001894-9791"],"termid":"MONDO:1012480","xrefs":{"Monarch":{"xref_id":"1012480"}}}


id: PBO:0035943
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cytoplasmic_microtubule_nucleation_during_mitotic_interphase","termid":"PBO:0035943"}


id: PBO:0070820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 50","termid":"PBO:0070820"}


id: GO:0030177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of Wnt signal transduction.","definition_xrefs":["GOC:dph","GOC:go_curators","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of Wnt signaling pathway","termid":"GO:0030111"},{"relation_name":"positively_regulates","term_name":"Wnt signaling pathway","termid":"GO:0016055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of Wnt signaling pathway","secondary_identifiers":["GO:0045811"],"synonyms":[{"name":"activation of Wnt receptor signaling pathway","type":"narrow"},{"name":"activation of frizzled signaling pathway","type":"narrow"},{"name":"positive regulation of Wnt receptor signaling pathway","type":"exact"},{"name":"positive regulation of Wnt receptor signalling pathway","type":"exact"},{"name":"positive regulation of Wnt-activated signaling pathway","type":"exact"},{"name":"positive regulation of frizzled signaling pathway","type":"exact"},{"name":"positive regulation of frizzled signalling pathway","type":"exact"},{"name":"stimulation of Wnt receptor signaling pathway","type":"narrow"},{"name":"stimulation of frizzled signaling pathway","type":"narrow"},{"name":"up regulation of Wnt receptor signaling pathway","type":"exact"},{"name":"up regulation of frizzled signaling pathway","type":"exact"},{"name":"up-regulation of Wnt receptor signaling pathway","type":"exact"},{"name":"up-regulation of frizzled signaling pathway","type":"exact"},{"name":"upregulation of Wnt receptor signaling pathway","type":"exact"},{"name":"upregulation of frizzled signaling pathway","type":"exact"}],"termid":"GO:0030177"}


id: GO:0021674
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of rhombomere 8 is generated and organized. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order.","definition_xrefs":["GOC:dph","GOC:curators","GO_REF:0000021","GOC:dgh","GOC:cls","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere morphogenesis","termid":"GO:0021593"},{"relation_name":"part_of","term_name":"rhombomere 8 development","termid":"GO:0021574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 8 morphogenesis","termid":"GO:0021674"}


id: PBO:0085562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein containing SH3-domains; involved in establishing cell polarity and morphogenesis; functions as a scaffold protein for complexes that include Cdc24p, Ste5p, Ste20p, and Rsr1p","termid":"PBO:0085562"}


id: GO:1900023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of D-erythro-sphingosine kinase activity.","definition_xrefs":["GOC:TermGenie","GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of D-erythro-sphingosine kinase activity (obsolete GO:1900023)","synonyms":[{"name":"positive regulation of sphingosine kinase activity","type":"exact"},{"name":"up regulation of D-erythro-sphingosine kinase activity","type":"related"},{"name":"up regulation of sphingosine kinase activity","type":"exact"}],"termid":"GO:1900023"}


id: PBO:0057482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR600 host gene","termid":"PBO:0057482"}


id: PBO:0077585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tropomodulin 4","termid":"PBO:0077585"}


id: FYPO:0004785
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to menadione is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"increased RNA level during cellular response to menadione","synonyms":[{"name":"increased RNA accumulation during cellular response to menadione","type":"related"},{"name":"increased RNA level during cellular response to menadione during mitotic cell cycle","type":"related"},{"name":"increased RNA level during cellular response to menadione during vegetative growth","type":"exact"},{"name":"increased mRNA level during cellular response to menadione","type":"narrow"},{"name":"increased transcript level during cellular response to menadione","type":"exact"}],"termid":"FYPO:0004785"}


id: PBO:0070571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 37","termid":"PBO:0070571"}


id: GO:0010427
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to abscisic acid, a plant hormone that regulates aspects of plant growth.","definition_xrefs":["PMID:17347412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoprenoid binding","termid":"GO:0019840"},{"relation_name":"is_a","term_name":"monocarboxylic acid binding","termid":"GO:0033293"},{"relation_name":"is_a","term_name":"hormone binding","termid":"GO:0042562"},{"relation_name":"is_a","term_name":"alcohol binding","termid":"GO:0043178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0008289"],"is_obsolete":false,"name":"abscisic acid binding","synonyms":[{"name":"ABA binding","type":"related"},{"name":"abscisate binding","type":"related"}],"termid":"GO:0010427"}


id: GO:0015946
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the conversion of methanol to methyl-Coenzyme M.","definition_xrefs":["MetaCyc:CO2FORM-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methanol metabolic process","termid":"GO:0015945"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"methanol oxidation","termid":"GO:0015946"}


id: MONDO:0044617
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"excluded_subClassOf","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"excluded_subClassOf","term_name":"obsolete dysostosis of genetic origin (obsolete MONDO:0018454)","termid":"MONDO:0018454"},{"relation_name":"excluded_subClassOf","term_name":"epidermal disease","termid":"MONDO:0019268"},{"relation_name":"excluded_subClassOf","term_name":"filamin-related bone disorder","termid":"MONDO:0019690"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked keloid scarring-reduced joint mobility-increased optic cup-to-disc ratio syndrome","secondary_identifiers":["GARD:21990","UMLS:C5567520","MEDGEN:1798943","Orphanet:482606"],"termid":"MONDO:0044617","xrefs":{"Monarch":{"xref_id":"0044617"}}}


id: PBO:0083700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Epsin-like protein required for endocytosis and actin patch assembly; functionally redundant with Ent1p; contains clathrin-binding motif at C-terminus; ENT2 has a paralog, ENT1, that arose from the whole genome duplication","termid":"PBO:0083700"}


id: GO:1904102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an acadesine stimulus.","definition_xrefs":["GOC:mr","GO_REF:0000071","PMID:20802119","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to acadesine","termid":"GO:1904101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to acadesine","termid":"GO:1904102"}


id: PBO:0085928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; member of the seripauperin multigene family encoded mainly in subtelomeric regions; SWAT-GFP, seamless-GFP and mCherry fusion proteins localize to the cytosol; identical to Pau22p; encodes two proteins that are translated from 2 different start codons","termid":"PBO:0085928"}


id: PBO:0048699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosylated lysosomal membrane protein","termid":"PBO:0048699"}


id: MONDO:0019917
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Maternal uniparental disomy of chromosome 20 (UPD 20) is a very rare chromosomal anomaly in which both copies of chromosome 20 are inherited from the mother. The main feature described is prenatal and postnatal growth retardation. Microcephaly, minor dysmorphic features and psychomotor developmental delay have been occasionally reported. Maternal UPD20 is most often ascertained by a mosaic trisomy 20 pregnancy.","definition_xrefs":["Orphanet:96186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 20 disorder","termid":"MONDO:0700025"},{"relation_name":"is_a","term_name":"uniparental disomy","termid":"MONDO:0700086"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maternal uniparental disomy of chromosome 20","secondary_identifiers":["MEDGEN:909388","SCTID:715735007","UMLS:C4275029","DOID:0111714","GARD:16849","OMIM:617352","icd11.foundation:700797720"],"synonyms":[{"name":"MBCS","type":"related"},{"name":"MULCHANDANI-BHOJ-CONLIN syndrome","type":"related"},{"name":"UPD(20)mat","type":"exact"},{"name":"maternal UPD(20)","type":"exact"},{"name":"maternal uniparental disomy of chromosome type 20","type":"exact"},{"name":"uniparental disomy, maternal, chromosome 20","type":"related"}],"termid":"MONDO:0019917","xrefs":{"Monarch":{"xref_id":"0019917"}}}


id: PBO:0087466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of a palmitoyltransferase; this complex adds a palmitoyl lipid moiety to heterolipidated substrates such as Ras1p and Ras2p through a thioester linkage; mutants partially mislocalize Ras2p to the vacuole; palmitoyltransferase is composed of Erf2p and Shr5p","termid":"PBO:0087466"}


id: PBO:0073418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"senataxin","termid":"PBO:0073418"}


id: PBO:0000871
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.3.2.2","termid":"PBO:0000871"}


id: PBO:0053822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1085","termid":"PBO:0053822"}


id: PBO:0050302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 4","termid":"PBO:0050302"}


id: PBO:0047489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferredoxin reductase","termid":"PBO:0047489"}


id: PBO:0080032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 18","termid":"PBO:0080032"}


id: MONDO:0017663
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete inherited tremor disorder (obsolete MONDO:0017663)","secondary_identifiers":["Orphanet:307064","Orphanet:307061"],"synonyms":[{"name":"rare genetic myoclonus","type":"exact"}],"termid":"MONDO:0017663","xrefs":{"Monarch":{"xref_id":"0017663"}}}


id: PBO:0086936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab family GTPase involved in the exocytic pathway; mediates intra-Golgi traffic or the budding of post-Golgi vesicles from the trans-Golgi; protein abundance increases in response to DNA replication stress; YPT32 has a paralog, YPT31, that arose from the whole genome duplication","termid":"PBO:0086936"}


id: GO:0061318
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized structural and/or functional features of a renal filtration cell. Renal filtration cells are specialized cells of the renal system that filter fluids by charge, size or both. Differentiation includes the processes involved in commitment of a cell to a specific fate and its subsequent development to the mature state.","definition_xrefs":["GOC:dph","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"renal system development","termid":"GO:0072001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal filtration cell differentiation","termid":"GO:0061318"}


id: FYPO:0006600
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to centromeric chromatin is decreased during metaphase of mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to centromere during mitotic metaphase","termid":"FYPO:0003002"},{"relation_name":"is_a","term_name":"decreased protein localization to centromeric chromatin during vegetative growth","termid":"FYPO:0006599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to centromeric chromatin during mitotic metaphase","synonyms":[{"name":"decreased protein localisation to centromeric chromatin during mitotic metaphase","type":"exact"},{"name":"decreased protein localization to centromeric chromatin during metaphase during vegetative growth","type":"exact"},{"name":"decreased protein localization to centromeric chromatin during metaphase of mitotic cell cycle","type":"related"},{"name":"reduced protein localization to centromeric chromatin during mitotic metaphase","type":"exact"}],"termid":"FYPO:0006600"}


id: MONDO:0008306
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cerebral amyloid angiopathy characterized by onset in the 4th to 6th decade of life, progressive mental deterioration, spasticity, muscular rigidity but no tremors, spontaneous movements or sensory changes that has material basis in an autosomal dominant mutation of ITM2B on chromosome 13q14.2.","definition_xrefs":["DOID:0070029"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral amyloid angiopathy","termid":"MONDO:0005620"},{"relation_name":"is_a","term_name":"ITM2B amyloidosis","termid":"MONDO:0018591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0021179"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005066","MONDO:0021179"],"is_obsolete":false,"name":"ABri amyloidosis","secondary_identifiers":["UMLS:C5190835","GARD:8344","ICD10EXP:I68.0*","icd11.foundation:1037669378","MESH:C538208","Orphanet:97345","ICD10EXP:E85.4+","MEDGEN:1677186","OMIM:176500"],"synonyms":[{"name":"ABri amyloidosis","type":"exact"},{"name":"Bri amyloidosis","type":"related"},{"name":"FBD","type":"exact"},{"name":"ITM2B-related cerebral amyloid angiopathy 1","type":"related"},{"name":"cerebral amyloid angiopathy, British type","type":"exact"},{"name":"cerebral amyloid angiopathy, ITM2B-RELATED, 1","type":"related"},{"name":"cerebral amyloid angiopathy, ITM2B-related, type 1","type":"exact"},{"name":"dementia familial British","type":"related"},{"name":"dementia, familial British","type":"related"},{"name":"familial British dementia","type":"exact"},{"name":"familial dementia, British type","type":"exact"},{"name":"presenile dementia with spastic ataxia","type":"exact"}],"termid":"MONDO:0008306","xrefs":{"Monarch":{"xref_id":"0008306"}}}


id: PBO:0060338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin VB pseudogene 3","termid":"PBO:0060338"}


id: PBO:0079433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin gamma 2","termid":"PBO:0079433"}


id: FYPO:0007183
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is increased during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein kinase activity","termid":"FYPO:0002700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000652","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"increased protein kinase activity during mitotic interphase","synonyms":[{"name":"increased protein kinase activity during interphase of mitotic cell cycle","type":"exact"}],"termid":"FYPO:0007183"}


id: GO:0031314
data:
  {"annotated_genes":["SJAG_03563","SJAG_04000","SJAG_03456","SJAG_01249","SJAG_00230","SJAG_04642","SJAG_05398","SJAG_00852","SJAG_00721","SJAG_00933","SJAG_01043","SJAG_00576"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[61258,62818,64768,66280,92689,103096,108035,108695,110004,111355],"is_not":false,"summary":null,"term":"GO:0031314"},{"annotations":[102274,105581],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099616"}]},"cv_name":"cellular_component","definition":"The component of mitochondrial inner membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:mah","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of organelle membrane","termid":"GO:0031312"},{"relation_name":"part_of","term_name":"mitochondrial inner membrane","termid":"GO:0005743"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00230":null,"SJAG_00576":null,"SJAG_00721":null,"SJAG_00852":null,"SJAG_00933":null,"SJAG_01043":null,"SJAG_01249":null,"SJAG_03456":null,"SJAG_03563":null,"SJAG_04000":null,"SJAG_04642":null,"SJAG_05398":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005739","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"extrinsic component of mitochondrial inner membrane","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"extrinsic to mitochondrial inner membrane","type":"narrow"}],"termid":"GO:0031314","terms_by_termid":{"GO:0031314":null,"GO:0099616":null}}


id: FYPO:0004139
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of a specific substance measured in a cell that is subject to nitrogen starvation differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of substance in cell","termid":"FYPO:0000989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"altered level of substance in cell during nitrogen starvation","synonyms":[{"name":"abnormal level of substance in cell during nitrogen starvation","type":"exact"}],"termid":"FYPO:0004139"}


id: GO:0097590
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell motility due to the motion of one or more archaeal-type flagella. An archaeal-type flagellum (also called archaellum) is a non-membrane-bounded organelle superficially similar to a bacterial-type flagellum, but having a different molecular structure and lacking a central channel.","definition_xrefs":["GOC:cilia","GOC:krc","Wikipedia:Flagellum#Archaeal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"archaeal or bacterial-type flagellum-dependent cell motility","termid":"GO:0097588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"archaeal-type flagellum-dependent cell motility","synonyms":[{"name":"archaeal-type flagellar cell motility","type":"related"}],"termid":"GO:0097590"}


id: PBO:0052882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 9-4","termid":"PBO:0052882"}


id: GO:0070187
data:
  {"annotated_genes":["SJAG_03685","SJAG_02194","SJAG_01777","SJAG_03092","SJAG_01378","SJAG_01864"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[81600,91579,93654,96904,101537,117801],"is_not":false,"summary":null,"term":"GO:0070187"}]},"cv_name":"cellular_component","definition":"A nuclear telomere cap complex that is formed by the association of telomeric ssDNA- and dsDNA-binding proteins with telomeric DNA, and is involved in telomere protection and recruitment of telomerase. The complex is known to contain TERF1, TERF2, POT1, RAP1, TINF2 and ACD in mammalian cells, and Pot1, Tpz1, Rap1, Rif1, Rif2 and Taz1 in Saccharomyces. Taz1 and Rap1 (or their mammalian equivalents) form a dsDNA-binding subcomplex, Pot1 and Tpz1 form an ssDNA-binding subcomplex, and the two subcomplexes are bridged by Poz1, which acts as an effector molecule along with Ccq1.","definition_xrefs":["GOC:expert_mf","PMID:18828880","GOC:vw","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear telomere cap complex","termid":"GO:0000783"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01378":null,"SJAG_01777":null,"SJAG_01864":null,"SJAG_02194":null,"SJAG_03092":null,"SJAG_03685":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005694","GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"shelterin complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"Pot1 complex","type":"exact"},{"name":"Pot1-Tpz1 complex","type":"exact"},{"name":"telosome","type":"exact"}],"termid":"GO:0070187","terms_by_termid":{"GO:0070187":null}}


id: GO:0033201
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: RDP-glucose + [alpha-D-glucosyl-(1,4)]n = RDP + [alpha-D-glucosyl-(1,4)]n+1, where RDP is ADP or UDP.","definition_xrefs":["PMID:17472966"],"gene_count":0,"genotype_count":0,"name":"obsolete alpha-1,4-glucan synthase activity (obsolete GO:0033201)","synonyms":[{"name":"1,4-alpha-glucan synthase activity","type":"exact"}],"termid":"GO:0033201"}


id: FYPO:0005068
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites of double-strand breaks in DNA is greater than normal during S phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah","PMID:18180284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased number of double-strand break sites during vegetative growth","termid":"FYPO:0000455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased number of double-strand break sites during mitotic S phase","synonyms":[{"name":"accumulation of DNA damage foci during mitotic S phase","type":"related"},{"name":"accumulation of double-strand break sites during mitotic S phase","type":"exact"},{"name":"increased number of DNA damage foci during mitotic S phase","type":"related"},{"name":"increased number of double-strand break sites during S phase during vegetative growth","type":"exact"},{"name":"increased number of double-strand break sites during S phase of mitotic cell cycle","type":"exact"}],"termid":"FYPO:0005068"}


id: PBO:0067829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 131","termid":"PBO:0067829"}


id: MONDO:1011505
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fibrocartilaginous embolic myelopathy that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibrocartilaginous embolic myelopathy, non-human animal","termid":"MONDO:1011445"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrocartilaginous embolic myelopathy, horse","secondary_identifiers":["OMIA:001120-9796"],"termid":"MONDO:1011505","xrefs":{"Monarch":{"xref_id":"1011505"}}}


id: PR:Q9UST8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribonuclease H1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03401","PANTHER:PTHR10642:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease H (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC336.06c","secondary_identifiers":["UniProtKB:Q9UST8"],"synonyms":[{"name":"RNase H (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-RNASEH1","type":"exact"}],"termid":"PR:Q9UST8"}


id: GO:0072665
data:
  {"annotated_genes":["SJAG_03892","SJAG_04600","SJAG_00416","SJAG_00204","SJAG_01088","SJAG_03970","SJAG_01242","SJAG_01586","SJAG_02117","SJAG_00181","SJAG_02912","SJAG_04552","SJAG_03250","SJAG_02584","SJAG_01367","SJAG_00108","SJAG_04912","SJAG_01281","SJAG_03860","SJAG_03385","SJAG_01527","SJAG_03756","SJAG_04489","SJAG_01981","SJAG_01488","SJAG_04349","SJAG_02371","SJAG_03783","SJAG_16459","SJAG_00821","SJAG_05210","SJAG_01229","SJAG_00380","SJAG_05303","SJAG_04936","SJAG_00208","SJAG_03976","SJAG_04024","SJAG_01360"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93455,89824,65861,64512,69296,70912,64926,115166,116310,89937,93316,107585],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120113"},{"annotations":[92816],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044395"},{"annotations":[79457,77476,72974,74485,82126,79033,79909,78932,98366,75731],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006623"},{"annotations":[89940,102712,80216,89771,79483,97781,75242,73865,72834,79945,99773,73901,93458,108397,111222,72664,93319,75263,116569],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043328"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained at, a location in a vacuole.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to organelle","termid":"GO:0033365"}],"gene_count":39,"genes_by_uniquename":{"SJAG_00108":null,"SJAG_00181":null,"SJAG_00204":null,"SJAG_00208":null,"SJAG_00380":null,"SJAG_00416":null,"SJAG_00821":null,"SJAG_01088":null,"SJAG_01229":null,"SJAG_01242":null,"SJAG_01281":null,"SJAG_01360":null,"SJAG_01367":null,"SJAG_01488":null,"SJAG_01527":null,"SJAG_01586":null,"SJAG_01981":null,"SJAG_02117":null,"SJAG_02371":null,"SJAG_02584":null,"SJAG_02912":null,"SJAG_03250":null,"SJAG_03385":null,"SJAG_03756":null,"SJAG_03783":null,"SJAG_03860":null,"SJAG_03892":null,"SJAG_03970":null,"SJAG_03976":null,"SJAG_04024":null,"SJAG_04349":null,"SJAG_04489":null,"SJAG_04552":null,"SJAG_04600":null,"SJAG_04912":null,"SJAG_04936":null,"SJAG_05210":null,"SJAG_05303":null,"SJAG_16459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to vacuole","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"protein localisation to vacuole","type":"exact"}],"termid":"GO:0072665","terms_by_termid":{"GO:0006623":null,"GO:0043328":null,"GO:0044395":null,"GO:0120113":null}}


id: MONDO:0015402
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mandibular arteriovenous malformation is a rare vascular anomaly characterized by an abnormal connection of the arterial and venous vasculature, without capillary connections, in the mandibular area, commonly presenting with minor gingival bleeding, dental loosening, lower lip numbness, facial deformity and malocclusion. This usually high-flow vascular malformation may also present with potentially life-threatening, spontaneous, or tooth extraction-induced, hemorrhagic shock.","definition_xrefs":["Orphanet:141174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"facial arteriovenous malformation","termid":"MONDO:0015500"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mandibular arteriovenous malformation","secondary_identifiers":["UMLS:C3839452","GARD:19957","SCTID:703334000","icd11.foundation:113998538","MEDGEN:825297"],"synonyms":[{"name":"arteriovenous malformation of mandible","type":"exact"}],"termid":"MONDO:0015402","xrefs":{"Monarch":{"xref_id":"0015402"}}}


id: MONDO:0013130
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any isolated microphthalmia in which the cause of the disease is a mutation in the GDF6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isolated microphthalmia","termid":"MONDO:0000062"},{"relation_name":"is_a","term_name":"isolated anophthalmia-microphthalmia syndrome","termid":"MONDO:0016764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"isolated microphthalmia 4","secondary_identifiers":["UMLS:C2751307","OMIM:613094","DOID:0060836","MEDGEN:414346","MESH:C567757"],"synonyms":[{"name":"GDF6 isolated microphthalmia","type":"exact"},{"name":"MCOP4","type":"exact"},{"name":"isolated microphthalmia caused by mutation in GDF6","type":"exact"},{"name":"isolated microphthalmia type 4","type":"exact"},{"name":"microphthalmia, isolated 4","type":"related"},{"name":"microphthalmia, isolated type 4","type":"exact"}],"termid":"MONDO:0013130","xrefs":{"Monarch":{"xref_id":"0013130"}}}


id: PBO:0065631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase non-receptor type 11","termid":"PBO:0065631"}


id: PBO:0078975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (anticodon GCT) 3-1","termid":"PBO:0078975"}


id: SO:0002201
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A repeat at the ends of and within the sequence for which it has functional significance other than long terminal repeat.","direct_ancestors":[{"relation_name":"is_a","term_name":"repeat_region","termid":"SO:0000657"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"terminal_repeat","synonyms":[{"name":"INSDC_feature:repeat_region","type":"broad"},{"name":"INSDC_qualifier:terminal","type":"exact"},{"name":"terminal repeat","type":"exact"}],"termid":"SO:0002201"}


id: PBO:0003256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial dynamin family fusion GTPase protein (predicted)","termid":"PBO:0003256"}


id: GO:0005688
data:
  {"annotated_genes":["SJAG_03954","SJAG_02469","SJAG_03070","SJAG_03460","SJAG_03214","SJAG_01819","SJAG_05240","SJAG_01327"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[62963,63523,72513,73449,79313,80636,80643,81725],"is_not":false,"summary":null,"term":"GO:0005688"}]},"cv_name":"cellular_component","definition":"A ribonucleoprotein complex that contains small nuclear RNA U6, the Lsm2-8 heptameric ring complex, as well as several proteins that are unique to the U6 snRNP, most of which remain associated with the U6 snRNA both while the U6 snRNP is free or assembled into the U4/U6 snRNP or into a series of spliceosomal complexes.","definition_xrefs":["GOC:krc","GOC:mah","ISBN:0879695897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal snRNP complex","termid":"GO:0097525"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01327":null,"SJAG_01819":null,"SJAG_02469":null,"SJAG_03070":null,"SJAG_03214":null,"SJAG_03460":null,"SJAG_03954":null,"SJAG_05240":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"U6 snRNP","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000117":null},"synonyms":[{"name":"snRNP U6","type":"exact"}],"termid":"GO:0005688","terms_by_termid":{"GO:0005688":null}}


id: PBO:0077931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPTE2 pseudogene 4","termid":"PBO:0077931"}


id: MONDO:0000515
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chondrosarcoma (disease) that involves the bone tissue.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone cancer","termid":"MONDO:0002129"},{"relation_name":"is_a","term_name":"chondrosarcoma","termid":"MONDO:0008977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"bone chondrosarcoma","secondary_identifiers":["UMLS:C3163843","MEDGEN:756255","DOID:0050897"],"synonyms":[{"name":"bone tissue chondrosarcoma (disease)","type":"exact"},{"name":"chondrosarcoma (disease) of bone tissue","type":"exact"}],"termid":"MONDO:0000515","xrefs":{"Monarch":{"xref_id":"0000515"}}}


id: MONDO:0017799
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare syndrome affecting females. It is characterized by pleural effusion, ascites and non-malignant ovarian neoplasm. This syndrome usually follows a benign course. Prognosis is favorable following surgical resection of the ovarian mass.","definition_xrefs":["NCIT:C3223"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian benign neoplasm","termid":"MONDO:0000646"},{"relation_name":"is_a","term_name":"neoplastic syndrome","termid":"MONDO:0021058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meigs syndrome","secondary_identifiers":["MEDGEN:6287","MESH:D008539","SCTID:63402005","ICD9:629.89","GARD:21372","MedDRA:10027139","UMLS:C0025184","Orphanet:314451","icd11.foundation:1050919535"],"synonyms":[{"name":"Demons-Meigs syndrome","type":"exact"},{"name":"Meigs' syndrome","type":"exact"}],"termid":"MONDO:0017799","xrefs":{"Monarch":{"xref_id":"0017799"}}}


id: PBO:0073808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 6 member 13","termid":"PBO:0073808"}


id: GO:0043529
data:
  {"annotated_genes":["SJAG_01940","SJAG_01178","SJAG_01240"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[74548,76805,115987],"is_not":false,"summary":null,"term":"GO:0043529"}]},"cv_name":"cellular_component","definition":"An endoplasmic reticulum protein-containing complex that is conserved in eukaryotics and that mediates the insertion of tail-anchored proteins into the ER membrane. In yeast, includes Get1p, Get2p and Get3p proteins.","definition_xrefs":["PMID:16269340","GOC:vw","PMID:18724936","PMID:32910895","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01178":null,"SJAG_01240":null,"SJAG_01940":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575","GO:0005783"],"is_obsolete":false,"name":"GET complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0043529","terms_by_termid":{"GO:0043529":null}}


id: MONDO:0017297
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic lymphocytic inflammation with pontine perivascular enhancement responsive to steroids","secondary_identifiers":["MEDGEN:1433964","Orphanet:284448","UMLS:C3854437","GARD:10779","icd11.foundation:913443626"],"synonyms":[{"name":"CLIPPERS","type":"exact"},{"name":"chronic lymphocytic inflammation with pontine perivascular enhancement responsive to steroids","type":"exact"}],"termid":"MONDO:0017297","xrefs":{"Monarch":{"xref_id":"0017297"}}}


id: PBO:0090004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome subunit Rrp41","termid":"PBO:0090004"}


id: GO:2000588
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of platelet-derived growth factor receptor-beta signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of platelet-derived growth factor receptor signaling pathway","termid":"GO:0010641"},{"relation_name":"is_a","term_name":"regulation of platelet-derived growth factor receptor-beta signaling pathway","termid":"GO:2000586"},{"relation_name":"positively_regulates","term_name":"platelet-derived growth factor receptor-beta signaling pathway","termid":"GO:0035791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of platelet-derived growth factor receptor-beta signaling pathway","synonyms":[{"name":"positive regulation of PDGF receptor-beta signaling pathway","type":"exact"},{"name":"positive regulation of PDGFR-beta signaling pathway","type":"exact"},{"name":"positive regulation of betaPDGF receptor signaling pathway","type":"exact"},{"name":"positive regulation of platelet-derived growth factor receptor-beta signalling pathway","type":"exact"}],"termid":"GO:2000588"}


id: PBO:0050221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 38","termid":"PBO:0050221"}


id: GO:0060036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly and arrangement of a vacuole within a cell of the notochord.","definition_xrefs":["PMID:10964477","GOC:cb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuole organization","termid":"GO:0007033"},{"relation_name":"part_of","term_name":"notochord cell development","termid":"GO:0060035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"notochord cell vacuolation","termid":"GO:0060036"}


id: PBO:0089732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DNA polymerase, gamma subunit Pog1","termid":"PBO:0089732"}


id: PBO:0038570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABO, alpha 1-3-N-acetylgalactosaminyltransferase and alpha 1-3-galactosyltransferase","termid":"PBO:0038570"}


id: PBO:0042866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFAP97 domain containing 1","termid":"PBO:0042866"}


id: GO:0033333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a fin over time, from its formation to the mature structure.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"appendage development","termid":"GO:0048736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fin development","termid":"GO:0033333"}


id: PR:O60071
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- enp1 gene.","definition_xrefs":["UniProtKB:O60071","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C13G1.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13G1.09","synonyms":[{"name":"Spom972h-enp1","type":"exact"}],"termid":"PR:O60071"}


id: GO:0010967
data:
  {"annotated_genes":["SJAG_04546"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113028],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0170066"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of polyamine biosynthesis. Polyamine biosynthesis is the chemical reactions and pathways resulting in the formation of polyamines, any organic compound containing two or more amino groups.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of amine metabolic process","termid":"GO:0033238"},{"relation_name":"is_a","term_name":"regulation of primary metabolic process","termid":"GO:0080090"},{"relation_name":"regulates","term_name":"polyamine biosynthetic process","termid":"GO:0006596"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04546":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of polyamine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010967","terms_by_termid":{"GO:0170066":null}}


id: GO:0097716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of copper (Cu) ions passing through the blood-brain barrier.","definition_xrefs":["GOC:sl","PMID:24614235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copper ion transport","termid":"GO:0006825"},{"relation_name":"is_a","term_name":"transport across blood-brain barrier","termid":"GO:0150104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"copper ion transport across blood-brain barrier","synonyms":[{"name":"copper ion transport across BBB","type":"related"}],"termid":"GO:0097716"}


id: PBO:0074111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 29 member 3","termid":"PBO:0074111"}


id: MONDO:1011961
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachygnathia, cardiomegaly and renal hypoplasia syndrome, non-human animal","secondary_identifiers":["OMIA:001595"],"termid":"MONDO:1011961","xrefs":{"Monarch":{"xref_id":"1011961"}}}


id: PBO:0081283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 66","termid":"PBO:0081283"}


id: GO:0042617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of paclitaxel, a tetracyclic diterpenoid isolated originally from the bark of the Pacific yew tree, Taxus brevifolia.","definition_xrefs":["GOC:krc","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diterpenoid biosynthetic process","termid":"GO:0016102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"paclitaxel biosynthetic process","secondary_identifiers":["GO:0042616"],"synonyms":[{"name":"paclitaxel anabolism","type":"exact"},{"name":"paclitaxel biosynthesis","type":"exact"},{"name":"paclitaxel formation","type":"exact"},{"name":"paclitaxel metabolic process","type":"broad"},{"name":"paclitaxel metabolism","type":"broad"},{"name":"paclitaxel synthesis","type":"exact"},{"name":"taxol biosynthesis","type":"narrow"},{"name":"taxol biosynthetic process","type":"narrow"},{"name":"taxol metabolic process","type":"broad"},{"name":"taxol metabolism","type":"broad"}],"termid":"GO:0042617"}


id: GO:0051153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of striated muscle cell differentiation.","definition_xrefs":["GOC:ai","CL:0000737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle cell differentiation","termid":"GO:0051147"},{"relation_name":"regulates","term_name":"striated muscle cell differentiation","termid":"GO:0051146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of striated muscle cell differentiation","termid":"GO:0051153"}


id: GO:0046332
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a SMAD signaling protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"SMAD binding","termid":"GO:0046332"}


id: MONDO:0018740
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Methemoglobinemia that is caused by exposure to certain drugs (xylocaine and benzene).","definition_xrefs":["NCIT:C101045"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methemoglobinemia","termid":"MONDO:0001117"},{"relation_name":"is_a","term_name":"acquired hemoglobinopathy","termid":"MONDO:0044349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"drug-induced methemoglobinemia","secondary_identifiers":["Orphanet:464453","UMLS:C0472781","GARD:21930","SCTID:191390009","MEDGEN:632786","icd11.foundation:746336827"],"synonyms":[{"name":"acquired methemoglobinemia","type":"broad"},{"name":"drug induced methemoglobinemia","type":"exact"}],"termid":"MONDO:0018740","xrefs":{"Monarch":{"xref_id":"0018740"}}}


id: MONDO:0000086
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete polydactyly, preaxial (obsolete MONDO:0000086)","termid":"MONDO:0000086","xrefs":{"Monarch":{"xref_id":"0000086"}}}


id: GO:0035088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any cellular process that results in the specification, formation or maintenance polarization of a cell's architecture along its apical/basal axis so that the apical and basal regions of the cell have different membrane, extracellular matrix and sub-membrane cellular components.","definition_xrefs":["PMID:10934483","GOC:bf","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment or maintenance of bipolar cell polarity","termid":"GO:0061245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"establishment or maintenance of apical/basal cell polarity","termid":"GO:0035088"}


id: FYPO:0007836
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome occupancy is greater than normal at subtelomeric regions. Nucleosome occupancy measures the tendency for DNA in a given region to be packaged into nucleosomes.","definition_xrefs":["PMID:31837996","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nucleosome positioning in heterochromatin","termid":"FYPO:0000855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000641","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased nucleosome occupancy at subtelomere","synonyms":[{"name":"increased nucleosome occupancy at subtelomere during mitotic cell cycle","type":"related"},{"name":"increased nucleosome occupancy at subtelomere during vegetative growth","type":"exact"}],"termid":"FYPO:0007836"}


id: SO:0000854
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A homologous_region that is paralogous to another region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"paralogous","termid":"SO:0000859"},{"relation_name":"is_a","term_name":"homologous_region","termid":"SO:0000853"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paralogous_region","secondary_identifiers":["http://en.wikipedia.org/wiki/Paralog#Paralogy"],"synonyms":[{"name":"paralog","type":"exact"},{"name":"paralogous region","type":"exact"},{"name":"paralogue","type":"exact"}],"termid":"SO:0000854"}


id: PBO:0079477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TWSG1 divergent transcript","termid":"PBO:0079477"}


id: FYPO:0006913
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing ketoconazole.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0002057","FYPO:0000003","FYPO:0002060","FYPO:0000139","FYPO:0000257"],"is_obsolete":false,"name":"normal growth on ketoconazole","synonyms":[{"name":"normal cell population growth in presence of ketoconazole","type":"exact"},{"name":"normal cell population growth on ketoconazole","type":"exact"},{"name":"normal cellular response to ketoconazole","type":"related"},{"name":"normal vegetative cell population growth on ketoconazole","type":"exact"}],"termid":"FYPO:0006913"}


id: FYPO:0000221
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A transcription regulation phenotype observed in the vegetative growth phase of the life cycle in which the transcription of specific genes is regulated in response to the loss of mitochondrial DNA.","definition_xrefs":["PMID:17868468","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription regulation phenotype, adaptive response to loss of mtDNA (obsolete FYPO:0000221)","synonyms":[{"name":"adaptive expression responses","type":"exact"},{"name":"fission yeast transcription regulation phenotype, adaptive response to loss of mtDNA","type":"exact"},{"name":"transcription regulation phenotype, adaptive response to loss of mtDNA during mitotic cell cycle","type":"related"},{"name":"transcription regulation phenotype, adaptive response to loss of mtDNA during vegetative growth","type":"exact"}],"termid":"FYPO:0000221"}


id: PBO:0039055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiogenic factor with G-patch and FHA domains 1 pseudogene 4","termid":"PBO:0039055"}


id: MONDO:0004575
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition produced by a deficiency of choline in animals. Choline is known as a lipotropic agent because it has been shown to promote the transport of excess fat from the liver under certain conditions in laboratory animals. Combined deficiency of choline (included in the B vitamin complex) and all other methyl group donors causes liver cirrhosis in some animals. Unlike compounds normally considered as vitamins, choline does not serve as a cofactor in enzymatic reactions. (From Saunders Dictionary & Encyclopedia of Laboratory Medicine and Technology, 1984)","definition_xrefs":["MESH:D002796"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nutritional deficiency disease","termid":"MONDO:0006873"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choline deficiency disease","secondary_identifiers":["DOID:8456","UMLS:C0008412","SCTID:238113006","ICD9:266.2","MEDGEN:930"],"synonyms":[{"name":"choline deficiency","type":"exact"}],"termid":"MONDO:0004575","xrefs":{"Monarch":{"xref_id":"0004575"}}}


id: MONDO:0010489
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any non-syndromic X-linked intellectual disability in which the cause of the disease is a mutation in the MID2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic X-linked intellectual disability","termid":"MONDO:0019181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked 101","secondary_identifiers":["OMIM:300928","UMLS:C3890168","MEDGEN:855517","DOID:0112048","GARD:22694"],"synonyms":[{"name":"MID2 non-syndromic X-linked intellectual disability","type":"exact"},{"name":"MRX101","type":"related"},{"name":"intellectual developmental disorder, X-linked 101, X-linked recessive","type":"exact"},{"name":"intellectual disability, X-linked 101","type":"exact"},{"name":"intellectual disability, X-linked type 101","type":"exact"},{"name":"mental retardation, X-linked 101","type":"related"},{"name":"mental retardation, X-linked type 101","type":"exact"},{"name":"non-syndromic X-linked intellectual disability caused by mutation in MID2","type":"exact"}],"termid":"MONDO:0010489","xrefs":{"Monarch":{"xref_id":"0010489"}}}


id: GO:0102950
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: indole-3-acetate + L-valine + ATP = H+ + indole-3-acetyl-valine + AMP + diphosphoric acid.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete indole-3-acetyl-valine synthetase activity (obsolete GO:0102950)","termid":"GO:0102950"}


id: MONDO:0958226
data:
  {"annotated_genes":["SJAG_02896"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88915],"is_not":false,"summary":null,"term":"MONDO:0958226"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02896":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"leukoencephalopathy, porphyria-related","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:620711","UMLS:C5935575","MEDGEN:1862491"],"termid":"MONDO:0958226","terms_by_termid":{"MONDO:0958226":null},"xrefs":{"Monarch":{"xref_id":"0958226"}}}


id: PATO:0001912
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single process inhering in a bearer by virtue of the state of bearer's mechanical, physical, and biochemical processes.","definition_xrefs":["PATOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"process quality","termid":"PATO:0001236"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"physiological state","termid":"PATO:0001912"}


id: MONDO:0012092
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary sensory and autonomic neuropathy, type 5 (HSAN5) is characterized by loss of pain perception and impaired temperature sensitivity, in the absence of any other major neurological anomalies.","definition_xrefs":["Orphanet:64752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary sensory and autonomic neuropathy","termid":"MONDO:0015364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"hereditary sensory and autonomic neuropathy type 5","secondary_identifiers":["PMID:14976160","MEDGEN:6916","GARD:12328","SCTID:128206006","UMLS:C0020075","PMID:77656","icd11.foundation:1411011731","DOID:0070145","OMIM:608654"],"synonyms":[{"name":"HSAN 5","type":"related"},{"name":"HSAN V","type":"related"},{"name":"HSAN5","type":"exact"},{"name":"NGF autosomal recessive hereditary sensory and autonomic neuropathy","type":"exact"},{"name":"autosomal recessive hereditary sensory and autonomic neuropathy caused by mutation in NGF","type":"exact"},{"name":"congenital insensitivity to pain and thermal analgesia","type":"exact"},{"name":"hereditary sensory and autonomic neuropathy type V","type":"exact"},{"name":"insensitivity to pain, congenital","type":"related"},{"name":"neuropathy, hereditary sensory and autonomic, type 5","type":"related"},{"name":"neuropathy, hereditary sensory and autonomic, type V","type":"related"}],"termid":"MONDO:0012092","xrefs":{"Monarch":{"xref_id":"0012092"}}}


id: MONDO:0005372
data:
  {"annotated_genes":["SJAG_04176","SJAG_02463","SJAG_02690","SJAG_03051","SJAG_02339","SJAG_02439","SJAG_03867","SJAG_04663","SJAG_01465","SJAG_02035","SJAG_00377","SJAG_03698","SJAG_05196","SJAG_03286","SJAG_00786","SJAG_01941","SJAG_02294","SJAG_04758","SJAG_00663","SJAG_02223","SJAG_03635","SJAG_04324","SJAG_01837","SJAG_02006","SJAG_02500","SJAG_03418"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89026],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013901"},{"annotations":[89001],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014961"},{"annotations":[87169],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054725"},{"annotations":[86997],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054726"},{"annotations":[88194,88195],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054732"},{"annotations":[88604,88605],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011720"},{"annotations":[86948],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009461"},{"annotations":[87496],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030869"},{"annotations":[87864,87865],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030507"},{"annotations":[87882],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030515"},{"annotations":[88900],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030733"},{"annotations":[88752],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030787"},{"annotations":[87751],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024773"},{"annotations":[87802,87801,87803],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0976123"},{"annotations":[87771,87769,87768,87770,87772,87767,87766],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010767"}]},"cv_name":"mondo","definition":"The inability of the male to effect fertilization of an ovum after a specified period of unprotected intercourse. Male sterility is permanent infertility.","definition_xrefs":["MESH:D007248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male reproductive system disorder","termid":"MONDO:0003150"},{"relation_name":"is_a","term_name":"infertility disorder","termid":"MONDO:0005047"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00377":null,"SJAG_00663":null,"SJAG_00786":null,"SJAG_01465":null,"SJAG_01837":null,"SJAG_01941":null,"SJAG_02006":null,"SJAG_02035":null,"SJAG_02223":null,"SJAG_02294":null,"SJAG_02339":null,"SJAG_02439":null,"SJAG_02463":null,"SJAG_02500":null,"SJAG_02690":null,"SJAG_03051":null,"SJAG_03286":null,"SJAG_03418":null,"SJAG_03635":null,"SJAG_03698":null,"SJAG_03867":null,"SJAG_04176":null,"SJAG_04324":null,"SJAG_04663":null,"SJAG_04758":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"male infertility","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0021364","ICD9:606","SCTID:2904007","icd11.foundation:753457327","ICD9:606.9","MEDGEN:5796","EFO:0004248","ICD10CM:N46","DOID:12336"],"synonyms":[{"name":"infertility disorder of male reproductive system","type":"exact"},{"name":"male reproductive system infertility","type":"exact"},{"name":"male reproductive system infertility disorder","type":"exact"}],"termid":"MONDO:0005372","terms_by_termid":{"MONDO:0009461":null,"MONDO:0010767":null,"MONDO:0011720":null,"MONDO:0013901":null,"MONDO:0014961":null,"MONDO:0024773":null,"MONDO:0030507":null,"MONDO:0030515":null,"MONDO:0030733":null,"MONDO:0030787":null,"MONDO:0030869":null,"MONDO:0054725":null,"MONDO:0054726":null,"MONDO:0054732":null,"MONDO:0976123":null},"xrefs":{"Monarch":{"xref_id":"0005372"}}}


id: PBO:0046533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERRFI1 divergent transcript","termid":"PBO:0046533"}


id: GO:0016232
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the synthesis of the HKK-1 carbohydrate epitope; adds a sulfate group to a precursor, GlcA-beta-(1->3)-Gal-beta-(1->4)-GlcNAc-beta-(1->R), forming sulfo-3GlcA-beta-(1->3)-Gal-beta-(1->4)-GlcNAc-beta-(1->R).","definition_xrefs":["PMID:9478973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016782","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"HNK-1 sulfotransferase activity","secondary_identifiers":["Reactome:R-HSA-6786048"],"synonyms":[{"name":"HNK-1 sulphotransferase activity","type":"exact"}],"termid":"GO:0016232"}


id: PR:P78812
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 6-phosphogluconate dehydrogenase, decarboxylating that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11811:SF19","OMA:SCHPO02372","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-phosphogluconate dehydrogenase, decarboxylating (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC660.16","secondary_identifiers":["UniProtKB:P78812"],"synonyms":[{"name":"Spom972h-PGD","type":"exact"}],"termid":"PR:P78812"}


id: SO:0001343
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N2_7_2prirme_O_trimethylguanosine is a modified guanosine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_guanosine","termid":"SO:0001276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N2_7_2prirme_O_trimethylguanosine","secondary_identifiers":["RNAMOD:106"],"synonyms":[{"name":"N2 7 2prirme O trimethylguanosine","type":"exact"},{"name":"N2,7,2'-O-trimethylguanosine","type":"exact"},{"name":"m2,7Gm","type":"exact"}],"termid":"SO:0001343"}


id: PBO:0060811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit V3","termid":"PBO:0060811"}


id: MONDO:0016950
data:
  {"annotated_genes":["SJAG_02231"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87336],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012574"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of chromosome 17","termid":"MONDO:0016935"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02231":null},"genotype_count":0,"is_obsolete":false,"name":"partial duplication of the short arm of chromosome 17","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1826039","Orphanet:262803","UMLS:C5679714","GARD:20870","icd11.foundation:1672849162"],"synonyms":[{"name":"partial duplication of chromosome 17p","type":"exact"},{"name":"partial duplication of the short arm of chromosome type 17","type":"exact"},{"name":"partial trisomy of chromosome 17p","type":"exact"},{"name":"partial trisomy of the short arm of chromosome 17","type":"exact"}],"termid":"MONDO:0016950","terms_by_termid":{"MONDO:0012574":null},"xrefs":{"Monarch":{"xref_id":"0016950"}}}


id: PBO:0001525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF2009 protein","termid":"PBO:0001525"}


id: MONDO:1012009
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"renal amyloidosis, non-human animal","termid":"MONDO:1011903"},{"relation_name":"is_a","term_name":"renal disease, dog","termid":"MONDO:1012235"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"renal amyloidosis, dog","secondary_identifiers":["OMIA:000040-9615"],"termid":"MONDO:1012009","xrefs":{"Monarch":{"xref_id":"1012009"}}}


id: PBO:0003903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar copper transporter Ctr6","termid":"PBO:0003903"}


id: GO:1902158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to G2 DNA damage checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to DNA damage checkpoint signaling","termid":"GO:1902154"},{"relation_name":"is_a","term_name":"regulation of response to G2 DNA damage checkpoint signaling","termid":"GO:1902157"},{"relation_name":"positively_regulates","term_name":"response to G2 DNA damage checkpoint signaling","termid":"GO:0072426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to G2 DNA damage checkpoint signaling","synonyms":[{"name":"activation of G2/M transition DNA damage checkpoint effector process","type":"exact"},{"name":"activation of response to G2 DNA damage checkpoint signaling","type":"narrow"},{"name":"activation of response to signal involved in G2/M transition DNA damage checkpoint","type":"exact"},{"name":"positive regulation of G2/M transition DNA damage checkpoint effector process","type":"exact"},{"name":"positive regulation of response to signal involved in G2/M transition DNA damage checkpoint","type":"exact"},{"name":"up regulation of G2/M transition DNA damage checkpoint effector process","type":"exact"},{"name":"up regulation of response to G2 DNA damage checkpoint signaling","type":"exact"},{"name":"up regulation of response to signal involved in G2/M transition DNA damage checkpoint","type":"exact"},{"name":"up-regulation of G2/M transition DNA damage checkpoint effector process","type":"exact"},{"name":"up-regulation of response to G2 DNA damage checkpoint signaling","type":"exact"},{"name":"up-regulation of response to signal involved in G2/M transition DNA damage checkpoint","type":"exact"},{"name":"upregulation of G2/M transition DNA damage checkpoint effector process","type":"exact"},{"name":"upregulation of response to G2 DNA damage checkpoint signaling","type":"exact"},{"name":"upregulation of response to signal involved in G2/M transition DNA damage checkpoint","type":"exact"}],"termid":"GO:1902158"}


id: GO:0050514
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: spermidine + putrescine = sym-homospermidine + propane-1,3-diamine.","definition_xrefs":["EC:2.5.1.45","MetaCyc:2.5.1.45-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016765"],"is_obsolete":false,"name":"homospermidine synthase (spermidine-specific) activity","secondary_identifiers":["RHEA:11236"],"synonyms":[{"name":"spermidine:putrescine 4-aminobutyltransferase (propane-1,3-diamine-forming)","type":"related"}],"termid":"GO:0050514"}


id: GO:0033305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways leading to the formation of chlorophyll a.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chlorophyll biosynthetic process","termid":"GO:0015995"},{"relation_name":"is_a","term_name":"chlorophyll a metabolic process","termid":"GO:0033304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"chlorophyll a biosynthetic process","synonyms":[{"name":"chlorophyll a anabolism","type":"exact"},{"name":"chlorophyll a biosynthesis","type":"exact"},{"name":"chlorophyll a formation","type":"exact"},{"name":"chlorophyll a synthesis","type":"exact"}],"termid":"GO:0033305"}


id: PBO:0027549
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_non-fermentable_carbon_source","termid":"PBO:0027549"}


id: PBO:0066083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid receptor responder 2 pseudogene 11","termid":"PBO:0066083"}


id: PBO:0080490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VWA8 antisense RNA 1 (head to head)","termid":"PBO:0080490"}


id: FYPO:0003297
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which ribosome binding by a gene product does not occur. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein-protein interaction","termid":"FYPO:0000705"},{"relation_name":"is_a","term_name":"abnormal ribonucleoprotein complex binding","termid":"FYPO:0003632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000702","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"abolished ribosome binding","synonyms":[{"name":"ribosome binding abolished","type":"exact"}],"termid":"FYPO:0003297"}


id: PBO:0081606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 529","termid":"PBO:0081606"}


id: PBO:0045851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 41","termid":"PBO:0045851"}


id: GO:0009228
data:
  {"annotated_genes":["SJAG_00381","SJAG_00827","SJAG_04866","SJAG_02421","SJAG_02420","SJAG_02406","SJAG_03538","SJAG_03362","SJAG_04282","SJAG_04067","SJAG_01970"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62213,71804,75672,75730,78755,80196],"is_not":false,"summary":null,"term":"GO:0009228"},{"annotations":[115543,90852],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0090180"},{"annotations":[101343,112298,112297],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036172"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of thiamine (vitamin B1), a water soluble vitamin present in fresh vegetables and meats, especially liver.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiamine metabolic process","termid":"GO:0006772"},{"relation_name":"is_a","term_name":"primary alcohol biosynthetic process","termid":"GO:0034309"},{"relation_name":"is_a","term_name":"thiamine-containing compound biosynthetic process","termid":"GO:0042724"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00381":null,"SJAG_00827":null,"SJAG_01970":null,"SJAG_02406":null,"SJAG_02420":null,"SJAG_02421":null,"SJAG_03362":null,"SJAG_03538":null,"SJAG_04067":null,"SJAG_04282":null,"SJAG_04866":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0044281","GO:0006766"],"is_obsolete":false,"name":"thiamine biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:THISYN-PWY"],"synonyms":[{"name":"thiamin anabolism","type":"exact"},{"name":"thiamin biosynthetic process","type":"exact"},{"name":"thiamine biosynthesis","type":"exact"},{"name":"thiamine formation","type":"exact"},{"name":"thiamine synthesis","type":"exact"},{"name":"vitamin B1 biosynthesis","type":"exact"},{"name":"vitamin B1 biosynthetic process","type":"exact"}],"termid":"GO:0009228","terms_by_termid":{"GO:0009228":null,"GO:0036172":null,"GO:0090180":null}}


id: GO:1905902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mesoderm formation.","definition_xrefs":["PMID:23939491","GOC:BHF_miRNA","GOC:TermGenie","GO_REF:0000058","GOC:rph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"mesoderm formation","termid":"GO:0001707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesoderm formation","termid":"GO:1905902"}


id: GO:0015846
data:
  {"annotated_genes":["SJAG_02060","SJAG_02059","SJAG_03817","SJAG_04134","SJAG_02125","SJAG_04469","SJAG_02344"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104425],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902047"},{"annotations":[72309],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015847"},{"annotations":[108226],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902267"},{"annotations":[62414,70461,70558,58059,62438],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903711"},{"annotations":[70460,62413,70557,62437],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903710"}]},"cv_name":"biological_process","definition":"The directed movement of polyamines, organic compounds containing two or more amino groups, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":7,"genes_by_uniquename":{"SJAG_02059":null,"SJAG_02060":null,"SJAG_02125":null,"SJAG_02344":null,"SJAG_03817":null,"SJAG_04134":null,"SJAG_04469":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"polyamine transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null},"termid":"GO:0015846","terms_by_termid":{"GO:0015847":null,"GO:1902047":null,"GO:1902267":null,"GO:1903710":null,"GO:1903711":null}}


id: MOD:01825
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue sulfhydryl hydrogen with a Thermo Scientific cysTMT6plex-128 reporter+balance group.","definition_xrefs":["PubMed:18688235","URL:http://www.piercenet.com/files/2162220.pdf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysTMT6plex reporter+balance reagent cysteine disulfide","termid":"MOD:01821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"cysTMT6plex-128 reporter+balance reagent cysteine disulfide","synonyms":[{"name":"S-(2-{3-[2-(2,6-dimethylpiperidin-1-yl)acetamido]propanamido}ethyl)sulfanyl","type":"exact"},{"name":"cysTMT6plex","type":"related"},{"name":"cysteine-reactive Sixplex Tandem Mass Tag(TM)","type":"related"}],"termid":"MOD:01825"}


id: PR:O94418
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nuclear pore complex protein Nup93 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04972","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 87 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1620.11","secondary_identifiers":["UniProtKB:O94418"],"synonyms":[{"name":"Spom972h-NUP93","type":"exact"}],"termid":"PR:O94418"}


id: GO:2001107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of Rho guanyl-nucleotide exchange factor activity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of guanyl-nucleotide exchange factor activity","termid":"GO:1905098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of Rho guanyl-nucleotide exchange factor activity","synonyms":[{"name":"negative regulation of Rho guanine nucleotide exchange factor","type":"exact"},{"name":"negative regulation of RhoGEF","type":"exact"}],"termid":"GO:2001107"}


