# terms

id: PBO:0056304
data:
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id: FYPO:0007451
data:
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id: GO:0010845
data:
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id: SO:0001902
data:
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id: FYPO:0001362
data:
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id: MONDO:0004023
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hepatoblastoma (obsolete MONDO:0004023)","termid":"MONDO:0004023","xrefs":{"Monarch":{"xref_id":"0004023"}}}


id: PBO:0110164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA wybutosine biosynthesis protein Tyw1","termid":"PBO:0110164"}


id: PBO:0041918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBR1 antisense RNA 1","termid":"PBO:0041918"}


id: GO:0097385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A programmed necrotic cell death occurring as a result of a starvation stimulus (deprivation of nourishment).","definition_xrefs":["GOC:pg","GOC:mtg_apoptosis","PMID:13679856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to starvation","termid":"GO:0042594"},{"relation_name":"is_a","term_name":"programmed necrotic cell death","termid":"GO:0097300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"programmed necrotic cell death in response to starvation","synonyms":[{"name":"necrotic cell death in response to starvation","type":"broad"}],"termid":"GO:0097385"}


id: PBO:0074811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 14C","termid":"PBO:0074811"}


id: GO:0014712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of branchiomeric skeletal muscle development. Branchiomeric skeletal muscle development is the process whose specific outcome is the progression of the branchiomeric skeletal muscle over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of branchiomeric skeletal muscle development","termid":"GO:0014711"},{"relation_name":"is_a","term_name":"positive regulation of skeletal muscle tissue development","termid":"GO:0048643"},{"relation_name":"positively_regulates","term_name":"branchiomeric skeletal muscle development","termid":"GO:0014707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of branchiomeric skeletal muscle development","termid":"GO:0014712"}


id: PR:O14074
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPACUNK4.09 gene.","definition_xrefs":["UniProtKB:O14074","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein UNK4.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPACUNK4.09","synonyms":[{"name":"Spom972h-SPACUNK4.09","type":"exact"}],"termid":"PR:O14074"}


id: FYPO:0003536
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the septation index is higher than normal in a population in stationary phase. The septation index is the proportion of the population undergoing septation at any given time.","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased septation index","termid":"FYPO:0000650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"increased septation index in stationary phase","synonyms":[{"name":"increased septation in stationary phase","type":"related"},{"name":"increased septation index during stationary phase","type":"exact"},{"name":"septated in stationary phase","type":"related"}],"termid":"FYPO:0003536"}


id: PBO:0048946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamic-oxaloacetic transaminase 1","termid":"PBO:0048946"}


id: GO:0035560
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pheophorbide a + H2O = pyropheophorbide a + methanol + CO2. The reaction occurs in two steps; pheophoridase catalyzes the conversion of pheophorbide a to a precursor of pyropheophorbide a, C-13(2)-carboxylpyropheophorbide a, by demethylation, and then the precursor is decarboxylated non-enzymatically to yield pyropheophorbide a.","definition_xrefs":["PMID:16228561","RHEA:32483"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"pheophorbidase activity","secondary_identifiers":["EC:3.1.1.82"],"synonyms":[{"name":"PPD activity","type":"related"},{"name":"phedase activity","type":"related"},{"name":"pheophoridase activity","type":"related"}],"termid":"GO:0035560"}


id: PBO:0068323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 24","termid":"PBO:0068323"}


id: PBO:0080708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wnt family member 9B","termid":"PBO:0080708"}


id: GO:1900678
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ferricrocin biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ferrichrome biosynthetic process","termid":"GO:1905568"},{"relation_name":"regulates","term_name":"ferricrocin biosynthetic process","termid":"GO:0031171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"regulation of ferricrocin biosynthetic process","synonyms":[{"name":"regulation of ferricrocin anabolism","type":"exact"},{"name":"regulation of ferricrocin biosynthesis","type":"exact"},{"name":"regulation of ferricrocin biosynthetic process, peptide formation","type":"narrow"},{"name":"regulation of ferricrocin biosynthetic process, peptide modification","type":"narrow"},{"name":"regulation of ferricrocin formation","type":"exact"},{"name":"regulation of ferricrocin synthesis","type":"exact"}],"termid":"GO:1900678"}


id: PBO:0088874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acylpeptide hydrolase","termid":"PBO:0088874"}


id: PBO:0027389
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_glutathione_disulfide_oxidoreductase_activity","termid":"PBO:0027389"}


id: PBO:0031347
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_enfumafungin","termid":"PBO:0031347"}


id: MONDO:0017787
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"erythroderma desquamativum","secondary_identifiers":["UMLS:C5551904","Orphanet:314","GARD:6878","MESH:C535512","MEDGEN:1790529","HGNC:1331"],"synonyms":[{"name":"Leiner disease","type":"exact"},{"name":"Leiner-Moussous desquamative erythroderma","type":"related"},{"name":"erythroderma desquamativa of Leiner","type":"related"},{"name":"erythroderma desquamativum of infancy","type":"related"},{"name":"generalised erythroderma, diarrhea, and failure to thrive","type":"related"},{"name":"generalized erythroderma, diarrhea, and failure to thrive","type":"related"}],"termid":"MONDO:0017787","xrefs":{"Monarch":{"xref_id":"0017787"}}}


id: PBO:0114079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein, predicted plasma membrane receptor","termid":"PBO:0114079"}


id: PBO:0114074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 5C, pseudogene","termid":"PBO:0114074"}


id: GO:0007622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specific behavior of an organism that recur with measured regularity.","definition_xrefs":["GOC:jl","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhythmic behavior","synonyms":[{"name":"rhythmic behavioral response to stimulus","type":"exact"},{"name":"rhythmic behaviour","type":"exact"},{"name":"rhythmic behavioural response to stimulus","type":"exact"}],"termid":"GO:0007622"}


id: PBO:0053569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 587","termid":"PBO:0053569"}


id: PATO:0001068
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001068 relative strain (obsolete PATO:0001068)","termid":"PATO:0001068"}


id: PBO:0033804
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_level_during_mitotic_G1_cell_cycle_arrest_in_response_to_nitrogen_starvation","termid":"PBO:0033804"}


id: GO:0052346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of the production of nitric oxide as part of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of defense-related symbiont nitric oxide production (obsolete GO:0052346)","synonyms":[{"name":"positive regulation by organism of defense-related symbiont NO production","type":"exact"},{"name":"positive regulation by organism of defense-related symbiont nitric oxide production","type":"exact"}],"termid":"GO:0052346"}


id: GO:1904275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of a tricellular tight junction into its constituent components.","definition_xrefs":["GOC:TermGenie","PMID:25097825","GOC:mr","PMID:22640933","PMID:4203962","GO_REF:0000079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tight junction disassembly","termid":"GO:1905071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tricellular tight junction disassembly","termid":"GO:1904275"}


id: GO:0046669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of programmed cell death that occurs in the compound eye retina.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of retinal cell programmed cell death","termid":"GO:0046668"},{"relation_name":"regulates","term_name":"compound eye retinal cell programmed cell death","termid":"GO:0046667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of compound eye retinal cell programmed cell death","synonyms":[{"name":"regulation of retinal cell programmed cell death","type":"broad"}],"termid":"GO:0046669"}


id: GO:0017120
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the conversion of phosphatidylinositol-3-phosphate, phosphatidylinositol-4-phosphate, and phosphatidylinositol-3,5-bisphosphate, but not PI-4,5-bisphosphate, to phosphatidylinositol; PPIPase activity is a key regulator of membrane trafficking and actin cytoskeleton organization.","definition_xrefs":["PMID:10224048"],"gene_count":0,"genotype_count":0,"name":"obsolete polyphosphatidylinositol phosphatase activity (obsolete GO:0017120)","synonyms":[{"name":"polyphosphatidylinositol phosphatase activity","type":"exact"},{"name":"polyphosphoinositide phosphatase activity","type":"exact"}],"termid":"GO:0017120"}


id: MONDO:0013299
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 6","termid":"MONDO:0016905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 6q11-q14 deletion syndrome","secondary_identifiers":["DOID:0060423","MEDGEN:462140","OMIM:613544","UMLS:C3150790"],"synonyms":[{"name":"chromosome 6Q13-q14 deletion syndrome","type":"related"},{"name":"chromosome 6q11-q14 deletion syndrome","type":"exact"},{"name":"chromosome 6q11-q14 deletion syndrome, isolated cases","type":"exact"}],"termid":"MONDO:0013299","xrefs":{"Monarch":{"xref_id":"0013299"}}}


id: PBO:0056328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP3K9 divergent transcript","termid":"PBO:0056328"}


id: GO:0039015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of the population in the pronephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell proliferation involved in kidney development","termid":"GO:0072111"},{"relation_name":"part_of","term_name":"pronephros development","termid":"GO:0048793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell proliferation involved in pronephros development","synonyms":[{"name":"cell proliferation involved in pronephric kidney development","type":"exact"}],"termid":"GO:0039015"}


id: GO:0046098
data:
  {"annotated_genes":["SJAG_01997"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[69626],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006147"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving guanine, 2-amino-6-hydroxypurine, a purine that is one of the five main bases found in nucleic acids and a component of a number of phosphorylated guanosine derivatives whose metabolic or regulatory functions are important.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase metabolic process","termid":"GO:0006144"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01997":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"guanine metabolic process","references_by_uniquename":{"GO_REF:0000041":null},"synonyms":[{"name":"guanine metabolism","type":"exact"}],"termid":"GO:0046098","terms_by_termid":{"GO:0006147":null}}


id: PBO:0045609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 20 (pseudogene)","termid":"PBO:0045609"}


id: MOD:00243
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-serine residue to form L-cysteine oxazole-4-carboxylic acid.","definition_xrefs":["PubMed:8895467","PubMed:8183941","RESID:AA0238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxazole/oxazoline ring crosslinked residues (Ser)","termid":"MOD:01421"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-cysteine oxazole-4-carboxylic acid","synonyms":[{"name":"2-(1-azanyl-2-sulfanylethyl)-4-oxazolecarboxylic acid","type":"exact"},{"name":"2-[(1R)-1-amino-2-sulfanylethyl]-1,3-oxazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK Oxazole-4-carboxylic acid (Cys-Ser)","type":"exact"},{"name":"L-cysteine oxazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:00243"}


id: GO:1900663
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of emericellamide A biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of emericellamide biosynthetic process","termid":"GO:1900660"},{"relation_name":"is_a","term_name":"regulation of emericellamide A biosynthetic process","termid":"GO:1900661"},{"relation_name":"positively_regulates","term_name":"emericellamide A biosynthetic process","termid":"GO:1900617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"positive regulation of emericellamide A biosynthetic process","synonyms":[{"name":"activation of emericellamide A anabolism","type":"exact"},{"name":"activation of emericellamide A biosynthesis","type":"exact"},{"name":"activation of emericellamide A biosynthetic process","type":"narrow"},{"name":"activation of emericellamide A formation","type":"exact"},{"name":"activation of emericellamide A synthesis","type":"exact"},{"name":"positive regulation of emericellamide A anabolism","type":"exact"},{"name":"positive regulation of emericellamide A biosynthesis","type":"exact"},{"name":"positive regulation of emericellamide A formation","type":"exact"},{"name":"positive regulation of emericellamide A synthesis","type":"exact"},{"name":"up regulation of emericellamide A anabolism","type":"exact"},{"name":"up regulation of emericellamide A biosynthesis","type":"exact"},{"name":"up regulation of emericellamide A biosynthetic process","type":"exact"},{"name":"up regulation of emericellamide A formation","type":"exact"},{"name":"up regulation of emericellamide A synthesis","type":"exact"},{"name":"up-regulation of emericellamide A anabolism","type":"exact"},{"name":"up-regulation of emericellamide A biosynthesis","type":"exact"},{"name":"up-regulation of emericellamide A biosynthetic process","type":"exact"},{"name":"up-regulation of emericellamide A formation","type":"exact"},{"name":"up-regulation of emericellamide A synthesis","type":"exact"},{"name":"upregulation of emericellamide A anabolism","type":"exact"},{"name":"upregulation of emericellamide A biosynthesis","type":"exact"},{"name":"upregulation of emericellamide A biosynthetic process","type":"exact"},{"name":"upregulation of emericellamide A formation","type":"exact"},{"name":"upregulation of emericellamide A synthesis","type":"exact"}],"termid":"GO:1900663"}


id: GO:0007439
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the ectodermal digestive tract over time, from its formation to the mature structure. The ectodermal digestive tract includes those portions that are derived from ectoderm.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue morphogenesis","termid":"GO:0048729"},{"relation_name":"part_of","term_name":"digestive tract development","termid":"GO:0048565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ectodermal digestive tract development","synonyms":[{"name":"ectodermal gut development","type":"related"}],"termid":"GO:0007439"}


id: GO:0120274
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a virus component, and in cooperation with a nearby primary receptor, initiating a change in cell activity.","definition_xrefs":["GOC:ha","GOC:krc","PMID:16051304"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exogenous protein binding","termid":"GO:0140272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"virus coreceptor activity","synonyms":[{"name":"viral coreceptor activity","type":"exact"}],"termid":"GO:0120274"}


id: PBO:0044057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystatin C","termid":"PBO:0044057"}


id: PBO:0034212
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_model","termid":"PBO:0034212"}


id: FYPO:0006378
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the endoplasmic reticulum is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000138","FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to endoplasmic reticulum during vegetative growth","synonyms":[{"name":"normal protein localisation to endoplasmic reticulum during vegetative growth","type":"exact"},{"name":"normal protein localization to ER during vegetative growth","type":"exact"},{"name":"normal protein localization to endoplasmic reticulum during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006378"}


id: PBO:0052022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Josephin domain containing 2","termid":"PBO:0052022"}


id: GO:1902193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 2-methylbut-2-enoyl-CoA(4-).","definition_xrefs":["PMID:15574432","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty-acyl-CoA catabolic process","termid":"GO:0036115"},{"relation_name":"is_a","term_name":"2-methylbut-2-enoyl-CoA(4-) metabolic process","termid":"GO:1902192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006790","GO:0006629","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"2-methylbut-2-enoyl-CoA(4-) catabolic process","synonyms":[{"name":"2-methylbut-2-enoyl-CoA(4-) breakdown","type":"exact"},{"name":"2-methylbut-2-enoyl-CoA(4-) catabolism","type":"exact"},{"name":"2-methylbut-2-enoyl-CoA(4-) degradation","type":"exact"}],"termid":"GO:1902193"}


id: PR:O94506
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rsm1 gene.","definition_xrefs":["UniProtKB:O94506","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA export factor rsm1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1753.05","synonyms":[{"name":"Spom972h-rsm1","type":"exact"}],"termid":"PR:O94506"}


id: PBO:0028731
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_hercynylselenocysteine_level_during_vegetative_growth","termid":"PBO:0028731"}


id: GO:0051261
data:
  {"annotated_genes":["SJAG_01224","SJAG_04312","SJAG_03380","SJAG_00723","SJAG_02624","SJAG_02700","SJAG_02336","SJAG_03025","SJAG_01894","SJAG_01297","SJAG_00279","SJAG_01993","SJAG_05296","SJAG_04841"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75113,71847],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030042"},{"annotations":[77997],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060172"},{"annotations":[80885,81936,94138,77285],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0051016"},{"annotations":[81479],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072318"},{"annotations":[120019,100435,91437],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007019"},{"annotations":[69388,63084],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070462"},{"annotations":[103671],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0031117"}]},"cv_name":"biological_process","definition":"The process in which protein polymers, compounds composed of a large number of component monomers, are broken down. Depolymerization occurs by the successive removal of monomers from an existing poly- or oligomeric protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex disassembly","termid":"GO:0032984"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_00723":null,"SJAG_01224":null,"SJAG_01297":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02336":null,"SJAG_02624":null,"SJAG_02700":null,"SJAG_03025":null,"SJAG_03380":null,"SJAG_04312":null,"SJAG_04841":null,"SJAG_05296":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein depolymerization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"protein polymer breakdown","type":"exact"},{"name":"protein polymer catabolic process","type":"exact"},{"name":"protein polymer catabolism","type":"exact"},{"name":"protein polymer degradation","type":"exact"}],"termid":"GO:0051261","terms_by_termid":{"GO:0007019":null,"GO:0030042":null,"GO:0031117":null,"GO:0051016":null,"GO:0060172":null,"GO:0070462":null,"GO:0072318":null}}


id: PBO:0048493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GCSH pseudogene 5","termid":"PBO:0048493"}


id: MONDO:0033010
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"erythrokeratodermia variabilis","termid":"MONDO:0017851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"erythrokeratodermia variabilis et progressiva 1","secondary_identifiers":["UMLS:C4551486","OMIM:133200","DOID:0111195","MEDGEN:1633225"],"synonyms":[{"name":"EKVP1","type":"related"},{"name":"Greither disease","type":"related"},{"name":"erythrokeratodermia Figurata, congenital familial, in plaques","type":"related"},{"name":"erythrokeratodermia variabilis","type":"related"},{"name":"erythrokeratodermia variabilis ET progressiva 1","type":"related"},{"name":"erythrokeratodermia variabilis Et progressiva","type":"related"},{"name":"erythrokeratodermia variabilis with erythema Gyratum Repens","type":"related"},{"name":"erythrokeratodermia, progressive symmetric","type":"related"},{"name":"keratosis palmoplantaris transgrediens Et progrediens","type":"related"}],"termid":"MONDO:0033010","xrefs":{"Monarch":{"xref_id":"0033010"}}}


id: FYPO:0007686
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the cell contains more nuclear exosome foci than normal.","definition_xrefs":["PomBase:mah","PMID:33574613"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased number of nuclear exosome foci","synonyms":[{"name":"increased number of Mmi1 foci","type":"exact"},{"name":"increased number of Mmi1 nuclear foci","type":"exact"}],"termid":"FYPO:0007686"}


id: GO:0090311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of protein deacetylation, the removal of an acetyl group from a protein amino acid. An acetyl group is CH3CO-, derived from acetic [ethanoic] acid.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein modification process","termid":"GO:0031399"},{"relation_name":"regulates","term_name":"protein deacetylation","termid":"GO:0006476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein deacetylation","synonyms":[{"name":"regulation of protein amino acid deacetylation","type":"exact"}],"termid":"GO:0090311"}


id: MONDO:0015354
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by a sensory and autonomic axonal neuropathy, sensorineural hearing loss and persistent global developmental delay.","definition_xrefs":["Orphanet:139573"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hereditary sensory and autonomic neuropathy with deafness and global delay","secondary_identifiers":["SCTID:717826009","GARD:19920","UMLS:C4303566","MEDGEN:929235"],"synonyms":[{"name":"HSAN with deafness and global delay","type":"exact"}],"termid":"MONDO:0015354","xrefs":{"Monarch":{"xref_id":"0015354"}}}


id: GO:0060888
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The pattern specification process that results in the subdivision of the epidermis of the limb in space to define a volume in which specific patterns of basal cell, spinous cell and granular cells will differentiate giving rise to the layers of the limb epidermis.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"is_a","term_name":"limb epidermis development","termid":"GO:0060887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"limb epidermis stratification","termid":"GO:0060888"}


id: PBO:0117106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RFX2 antisense RNA 1","termid":"PBO:0117106"}


id: MONDO:0008333
data:
  {"annotated_genes":["SJAG_01344","SJAG_05213","SJAG_03785"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87668,87669,87670],"is_not":false,"summary":null,"term":"MONDO:0008333"}]},"cv_name":"mondo","definition":"An autosomal dominant form of PXE.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal recessive inherited pseudoxanthoma elasticum","termid":"MONDO:0009925"},{"relation_name":"is_a","term_name":"inherited pseudoxanthoma elasticum","termid":"MONDO:0100091"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01344":null,"SJAG_03785":null,"SJAG_05213":null},"genotype_count":0,"is_obsolete":false,"name":"pseudoxanthoma elasticum, forme fruste","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:10104","OMIM:177850","UMLS:C1867450","MEDGEN:357280"],"synonyms":[{"name":"pseudoxanthoma elasticum, forme fruste","type":"exact"},{"name":"pseudoxanthoma elasticum, heterozygous","type":"related"}],"termid":"MONDO:0008333","terms_by_termid":{"MONDO:0008333":null},"xrefs":{"Monarch":{"xref_id":"0008333"}}}


id: GO:2001145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of phosphatase activity","termid":"GO:0010923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity","termid":"GO:2001145"}


id: PBO:0048458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GC-rich sequence DNA-binding factor 2","termid":"PBO:0048458"}


id: GO:0047679
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arginine = D-arginine.","definition_xrefs":["MetaCyc:ARGININE-RACEMASE-RXN","EC:5.1.1.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid racemase activity","termid":"GO:0047661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"arginine racemase activity","secondary_identifiers":["RHEA:18069"],"termid":"GO:0047679"}


id: PR:Q9UTH0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nup132 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTH0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin nup132 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1805.04","synonyms":[{"name":"Spom972h-nup132","type":"exact"},{"name":"nuclear pore protein nup132 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTH0"}


id: GO:0015854
data:
  {"annotated_genes":["SJAG_00760","SJAG_03777"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114404],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098710"},{"annotations":[117011],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140140"}]},"cv_name":"biological_process","definition":"The directed movement of guanine, 2-amino-6-hydroxypurine, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase transport","termid":"GO:0006863"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00760":null,"SJAG_03777":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"guanine transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015854","terms_by_termid":{"GO:0098710":null,"GO:0140140":null}}


id: PBO:0066852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 152","termid":"PBO:0066852"}


id: GO:0050272
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-chloro-L-alanine + thioglycolate = S-carboxymethyl-L-cysteine + chloride + H+.","definition_xrefs":["EC:4.5.1.5","RHEA:22868"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-halide lyase activity","termid":"GO:0016848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"S-carboxymethylcysteine synthase activity","secondary_identifiers":["KEGG_REACTION:R04003","MetaCyc:S-CARBOXYMETHYLCYSTEINE-SYNTHASE-RXN"],"synonyms":[{"name":"3-chloro-L-alanine chloride-lyase (adding thioglycolate)","type":"related"},{"name":"3-chloro-L-alanine chloride-lyase (adding thioglycolate; S-carboxymethyl-L-cysteine-forming)","type":"related"},{"name":"S-carboxymethyl-L-cysteine synthase activity","type":"related"}],"termid":"GO:0050272"}


id: PBO:0060008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 28","termid":"PBO:0060008"}


id: PBO:0076149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SDS3 homolog, SIN3A corepressor complex component pseudogene 1","termid":"PBO:0076149"}


id: GO:0033879
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: 17-O-acetylajmaline + H2O = ajmaline + acetate, and 17-O-acetylnorajmaline + H2O = norajmaline + acetate.","definition_xrefs":["EC:3.1.1.80"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"acetylajmaline esterase activity","synonyms":[{"name":"17-O-acetylajmaline O-acetylhydrolase activity","type":"related"},{"name":"2beta(R)-17-O-acetylajmalan:acetylesterase activity","type":"related"},{"name":"AAE","type":"related"},{"name":"acetylajmalan esterase activity","type":"related"}],"termid":"GO:0033879"}


id: PBO:0056478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrilin 1","termid":"PBO:0056478"}


id: PBO:0048146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FXYD domain containing ion transport regulator 6 pseudogene 2","termid":"PBO:0048146"}


id: FYPO:0008065
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the frequency of occurrence of ascospore formation is decreased after phosphate removal.","direct_ancestors":[{"relation_name":"is_a","term_name":"decreased sporulation frequency","termid":"FYPO:0000584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"decreased sporulation frequency during phosphate starvation","termid":"FYPO:0008065"}


id: MOD:01867
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the O4'-hydrogen atom of a tyrosine residue with the Applied Biosystems mTRAQ light reporter+balance group.","definition_xrefs":["OMSSA:210","Unimod:888#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"mTRAQ light reporter+balance reagent acylated residue","termid":"MOD:01864"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mTRAQ light reporter+balance reagent O4'-acylated tyrosine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems mTRAQ(TM) reagent","type":"related"},{"name":"mTRAQ light","type":"related"},{"name":"mTRAQ light on Y","type":"exact"}],"termid":"MOD:01867"}


id: PBO:0074850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 38C","termid":"PBO:0074850"}


id: PBO:0067012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 20, pseudogene","termid":"PBO:0067012"}


id: GO:0050262
data:
  {"annotated_genes":["SJAG_04693"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114950],"is_not":false,"summary":null,"term":"GO:0050262"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-nicotinamide D-riboside + ATP = beta-nicotinamide D-ribonucleotide + ADP + H+.","definition_xrefs":["RHEA:14017","PMID:17914902"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04693":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"ribosylnicotinamide kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RIBOSYLNICOTINAMIDE-KINASE-RXN","Reactome:R-HSA-8869627","Reactome:R-HSA-8869633","GO:0000816","EC:2.7.1.22","KEGG_REACTION:R02324"],"synonyms":[{"name":"ATP:N-ribosylnicotinamide 5'-phosphotransferase activity","type":"related"},{"name":"nicotinamide riboside kinase activity","type":"exact"},{"name":"ribosylnicotinamide kinase (phosphorylating)","type":"related"}],"termid":"GO:0050262","terms_by_termid":{"GO:0050262":null}}


id: MONDO:0056802
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease or disorder that involves the synovial bursa.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synovium disorder","termid":"MONDO:0056799"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synovial bursa disorder","secondary_identifiers":["SCTID:10597006","UMLS:C0263946","MEDGEN:538213"],"synonyms":[{"name":"disease of synovial bursa","type":"exact"},{"name":"disease or disorder of synovial bursa","type":"exact"},{"name":"disorder of bursa","type":"exact"},{"name":"disorder of synovial bursa","type":"exact"},{"name":"synovial bursa disease or disorder","type":"exact"}],"termid":"MONDO:0056802","xrefs":{"Monarch":{"xref_id":"0056802"}}}


id: MONDO:1012698
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any necrotising myelopathy that occurs in calves of the Simmental breed of cattle and is characterized by progressive hindlimb ataxia and paralysis and bilateral symmetrical foci of necrosis throughout the grey matter of the brain.","definition_xrefs":["PMID:18503072"],"direct_ancestors":[{"relation_name":"is_a","term_name":"necrotising myelopathy, non-human animal","termid":"MONDO:1011850"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multifocal symmetrical necrotizing encephalomyelopathy, Simmental cattle","secondary_identifiers":["OMIA:001490-9913"],"termid":"MONDO:1012698","xrefs":{"Monarch":{"xref_id":"1012698"}}}


id: PBO:0053431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 376","termid":"PBO:0053431"}


id: MONDO:0976124
data:
  {"annotated_genes":["SJAG_00609"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86845],"is_not":false,"summary":null,"term":"MONDO:0976124"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"intellectual disability","termid":"MONDO:0001071"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00609":null},"genotype_count":0,"is_obsolete":false,"name":"intellectual developmental disorder with polymicrogyria and seizures","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:621021"],"termid":"MONDO:0976124","terms_by_termid":{"MONDO:0976124":null},"xrefs":{"Monarch":{"xref_id":"0976124"}}}


id: PBO:0061428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor subfamily 1 group D member 2","termid":"PBO:0061428"}


id: PBO:0064100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi like RNA-mediated gene silencing 2","termid":"PBO:0064100"}


id: GO:0098840
data:
  {"annotated_genes":["SJAG_01211","SJAG_05319","SJAG_02731","SJAG_00918","SJAG_01546","SJAG_01775","SJAG_02336","SJAG_05220","SJAG_01297","SJAG_00851","SJAG_02761","SJAG_01224","SJAG_05266","SJAG_03437","SJAG_01371","SJAG_03540"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105568],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099117"},{"annotations":[105724,102206,110107,120548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140210"},{"annotations":[92794,115957,110730,118780,91564,100440,109343,111740,98589,102343,90957],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990976"}]},"cv_name":"biological_process","definition":"The directed movement of a protein along a microtubule, mediated by motor proteins.","definition_xrefs":["PMID:25987607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein transport","termid":"GO:0006886"},{"relation_name":"is_a","term_name":"transport along microtubule","termid":"GO:0010970"},{"relation_name":"is_a","term_name":"microtubule-based protein transport","termid":"GO:0099118"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00851":null,"SJAG_00918":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01297":null,"SJAG_01371":null,"SJAG_01546":null,"SJAG_01775":null,"SJAG_02336":null,"SJAG_02731":null,"SJAG_02761":null,"SJAG_03437":null,"SJAG_03540":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein transport along microtubule","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"microtubule-based protein transport","type":"broad"}],"termid":"GO:0098840","terms_by_termid":{"GO:0099117":null,"GO:0140210":null,"GO:1990976":null}}


id: GO:0070758
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of an interleukin-35-mediated signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine-mediated signaling pathway","termid":"GO:0001959"},{"relation_name":"regulates","term_name":"interleukin-35-mediated signaling pathway","termid":"GO:0070757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of interleukin-35-mediated signaling pathway","synonyms":[{"name":"regulation of IL-35-mediated signaling pathway","type":"exact"},{"name":"regulation of interleukin-35-mediated signalling pathway","type":"exact"}],"termid":"GO:0070758"}


id: FYPO:0004578
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of histone H3 measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0006551"],"is_obsolete":false,"name":"decreased level of histone H3 in cell","synonyms":[{"name":"decreased accumulation of histone H3 in cell","type":"related"},{"name":"decreased cellular histone H3 level","type":"exact"},{"name":"decreased histone H3 level during vegetative growth","type":"exact"},{"name":"decreased level of histone H3 in cell during mitotic cell cycle","type":"related"},{"name":"decreased level of histone H3 in cell during vegetative growth","type":"exact"},{"name":"reduced level of histone H3 in cell","type":"exact"}],"termid":"FYPO:0004578"}


id: PBO:0046772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exophilin 5","termid":"PBO:0046772"}


id: GO:1901600
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving strigolactone.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpenoid metabolic process","termid":"GO:0006714"},{"relation_name":"is_a","term_name":"lactone metabolic process","termid":"GO:1901334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"strigolactone metabolic process","synonyms":[{"name":"strigolactone metabolism","type":"exact"}],"termid":"GO:1901600"}


id: PBO:0051733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrator complex subunit 4 pseudogene 2","termid":"PBO:0051733"}


id: PR:Q10072
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC3H1.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10072"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C3H1.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H1.06c","synonyms":[{"name":"Spom972h-SPAC3H1.06c","type":"exact"}],"termid":"PR:Q10072"}


id: PBO:0090206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic isoleucine-tRNA ligase Irs1","termid":"PBO:0090206"}


id: GO:1902727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of satellite cell proliferation; dependent on specific growth factor activity such as fibroblast growth factors and transforming growth factor beta.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:23212449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of skeletal muscle satellite cell proliferation","termid":"GO:1902723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of growth factor dependent skeletal muscle satellite cell proliferation","termid":"GO:1902727"}


id: GO:0050134
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(6)-methyl-L-lysine + H2O + O2 = L-lysine + formaldehyde + H2O2.","definition_xrefs":["RHEA:23200","EC:1.5.3.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor","termid":"GO:0016647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"N6-methyl-lysine oxidase activity","secondary_identifiers":["KEGG_REACTION:R00612","MetaCyc:N6-METHYL-LYSINE-OXIDASE-RXN"],"synonyms":[{"name":"6-N-methyl-L-lysine:oxygen oxidoreductase (demethylating)","type":"related"},{"name":"N(6)-methyllysine oxidase activity","type":"related"},{"name":"N6-methyl-L-lysine:oxygen oxidoreductase (demethylating)","type":"related"},{"name":"N6-methyllysine oxidase activity","type":"related"},{"name":"epsilon-N-methyllysine demethylase activity","type":"related"},{"name":"epsilon-alkyl-L-lysine:oxygen oxidoreductase activity","type":"related"},{"name":"epsilon-alkyllysinase activity","type":"related"}],"termid":"GO:0050134"}


id: PBO:0041492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C12orf42 antisense RNA 1","termid":"PBO:0041492"}


id: GO:0021835
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The creation and reception of signals that result in the migration of interneuron precursors up a concentration gradient towards the olfactory bulb.","definition_xrefs":["PMID:12626695","GOC:dgh","GOC:jid","GO_REF:0000021","GOC:cls","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive chemotaxis","termid":"GO:0050918"},{"relation_name":"part_of","term_name":"embryonic olfactory bulb interneuron precursor migration","termid":"GO:0021831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemoattraction involved in embryonic olfactory bulb interneuron precursor migration","synonyms":[{"name":"positive chemotaxis involved in embryonic olfactory bulb interneuron precursor migration","type":"exact"}],"termid":"GO:0021835"}


id: GO:0042610
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CD8, a receptor found on the surface of thymocytes and cytotoxic and suppressor T-lymphocytes.","definition_xrefs":["MSH:D016827","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"CD8 receptor binding","termid":"GO:0042610"}


id: PBO:0033795
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cell_population_growth_at_low_temperature","termid":"PBO:0033795"}


id: PBO:0090836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane iron transport multicopper oxidase Fio1","termid":"PBO:0090836"}


id: MONDO:0018145
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"retinal disorder","termid":"MONDO:0005283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0002320"],"is_obsolete":false,"name":"congenital retinal arteriovenous communication","secondary_identifiers":["GARD:21530","Orphanet:353334","UMLS:C0521570","MEDGEN:105478"],"synonyms":[{"name":"congenital arteriovenous anastomoses of the retina","type":"exact"},{"name":"congenital arteriovenous communication of the retina","type":"exact"},{"name":"congenital retinal arteriovenous anastomoses","type":"exact"}],"termid":"MONDO:0018145","xrefs":{"Monarch":{"xref_id":"0018145"}}}


id: MONDO:0023232
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An often fatal inflammatory disorder that affects the myocardium. Morphologically, it is characterized by the presence of an inflammatory infiltrate in the myocardial tissue that includes multinucleated giant cells. It is often associated with the presence of an autoimmune disorder. Patients present with arrhythmias and/or heart failure. Heart transplantation is the only treatment option available.","definition_xrefs":["NCIT:C97055"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myocarditis","termid":"MONDO:0002815"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"giant cell myocarditis","secondary_identifiers":["SCTID:60812006","GARD:6502","icd11.foundation:507103735","NORD:1183"],"synonyms":[{"name":"GCM","type":"related"},{"name":"giant cell myocarditis","type":"exact"},{"name":"idiopathic giant-cell myocarditis","type":"related"}],"termid":"MONDO:0023232","xrefs":{"Monarch":{"xref_id":"0023232"}}}


id: PR:P87232
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrpl4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87232"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L4, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4G3.06c","synonyms":[{"name":"Spom972h-mrpl4","type":"exact"}],"termid":"PR:P87232"}


id: PBO:0075978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal transducer and activator of transcription 4","termid":"PBO:0075978"}


id: PBO:0005225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial serine hydrolase (predicted)","termid":"PBO:0005225"}


id: PBO:0059195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAS related GPR family member X2","termid":"PBO:0059195"}


id: FYPO:0000015
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a daughter cell begins to grow from the lateral portion of the long axis of the cell, and at an angle to the septum or cell division site of the mother cell, resulting in the formation of a single cell that has a branch.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell shape","termid":"FYPO:0002196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"branched vegetative cell","synonyms":[{"name":"branched cell","type":"exact"},{"name":"branched cell during vegetative growth","type":"exact"},{"name":"branched vegetative cell during mitotic cell cycle","type":"related"},{"name":"cell morphology, branched","type":"exact"}],"termid":"FYPO:0000015"}


id: MONDO:0010160
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tyrosinemia type 2 is an inborn error of tyrosine metabolism characterized by hypertyrosinemia with oculocutaneous manifestations and, in some cases, intellectual deficit.","definition_xrefs":["Orphanet:28378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tyrosinemia","termid":"MONDO:0004741"},{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"focal palmoplantar keratoderma","termid":"MONDO:0017672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066","MONDO:0005328","MONDO:0004736"],"is_obsolete":false,"name":"tyrosinemia type II","secondary_identifiers":["NANDO:1200789","UMLS:C0268487","NCIT:C129032","GARD:3105","SCTID:4887000","DOID:0050725","icd11.foundation:1900229795","NANDO:2200469","MEDGEN:75687","OMIM:276600","MedDRA:10069463"],"synonyms":[{"name":"Oregon type tyrosinemia","type":"related"},{"name":"Richner Hanhart syndrome","type":"related"},{"name":"Richner-Hanhart syndrome","type":"exact"},{"name":"TYRSN2","type":"related"},{"name":"Tat deficiency","type":"related"},{"name":"Tyrosinosis oculocutaneous type","type":"related"},{"name":"Tyrosinosis, oculocutaneous type","type":"related"},{"name":"keratosis palmoplantaris with corneal dystrophy","type":"related"},{"name":"keratosis palmoplantaris-corneal dystrophy syndrome","type":"exact"},{"name":"oculocutaneous tyrosinemia","type":"exact"},{"name":"tyrosine aminotransferase deficiency","type":"related"},{"name":"tyrosine transaminase deficiency","type":"related"},{"name":"tyrosinemia due to TAT deficiency","type":"exact"},{"name":"tyrosinemia due to tyrosine aminotransferase deficiency","type":"exact"},{"name":"tyrosinemia type 2","type":"related"},{"name":"tyrosinemia type II","type":"exact"},{"name":"tyrosinemia, type 2","type":"related"},{"name":"tyrosinemia, type II","type":"related"}],"termid":"MONDO:0010160","xrefs":{"Monarch":{"xref_id":"0010160"}}}


id: GO:0019647
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The pathway in which formaldehyde is used as a carbon source in the ribulose monophosphate cycle. Methanotrophic bacteria produce formaldehyde from the oxidation of methane and methanol, and then assimilate it via the ribulose monophosphate cycle to form intermediates of the central metabolic routes that are subsequently used for biosynthesis of cell material. Three molecules of formaldehyde are assimilated, forming a three-carbon intermediate of central metabolism; in this pathway, all cellular carbon is assimilated at the oxidation level of formaldehyde.","definition_xrefs":["MetaCyc:PWY-1861"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formaldehyde assimilation","termid":"GO:0019649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"formaldehyde assimilation via ribulose monophosphate cycle","synonyms":[{"name":"formaldehyde assimilation via RuMP cycle","type":"exact"},{"name":"ribulose monophosphate cycle","type":"broad"}],"termid":"GO:0019647"}


id: MONDO:0019736
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dense deposit disease, a histological subtype of MPGN is an idiopathic chronic progressive kidney disorder distinguished by the presence of intra-membranous dense deposits in addition to immune complex subendothelial deposits in the glomerular capillary walls. This form often has a higher recurrence rate after a kidney transplant and is associated with extra-renal manifestations such as familial drusen.","definition_xrefs":["Orphanet:93571"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"non-immunoglobulin-mediated membranoproliferative glomerulonephritis","termid":"MONDO:0018013"},{"relation_name":"is_a","term_name":"primary membranoproliferative glomerulonephritis","termid":"MONDO:0018904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"dense deposit disease","secondary_identifiers":["GARD:8555","MEDGEN:124345","NANDO:1200739","NCIT:C123039","UMLS:C0268743","SCTID:722760002"],"synonyms":[{"name":"MPGN 2","type":"related"},{"name":"Mesangiocapillary glomerulonephritis type 2","type":"exact"},{"name":"glomerulonephritis membranoproliferative type 2","type":"related"},{"name":"membranoproliferative glomerulonephritis type 2","type":"exact"},{"name":"membranoproliferative glomerulonephritis type II","type":"related"}],"termid":"MONDO:0019736","xrefs":{"Monarch":{"xref_id":"0019736"}}}


id: PBO:0085724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in the HOG (high osmolarity glycerol) pathway; negatively regulates Hog1p by recruitment of phosphatase Ptc1p to the Pbs2p-Hog1p complex; interacts with Bck1p and down regulates the cell wall integrity pathway; found in the nucleus and cytoplasm; contains an SH3 domain and a Ptc1p binding domain (PBM)","termid":"PBO:0085724"}


id: SO:0000199
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of nucleotide sequence that has translocated to a new position. The observed adjacency of two previously separated regions.","definition_xrefs":["NCBI:th","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural_alteration","termid":"SO:0001785"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocation","synonyms":[{"name":"transchr","type":"related"},{"name":"translocated sequence","type":"exact"}],"termid":"SO:0000199"}


id: GO:0000394
data:
  {"annotated_genes":["SJAG_00956","SJAG_01791","SJAG_00754","SJAG_03328","SJAG_04907","SJAG_01260","SJAG_03913"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75511,75573,79690],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006388"},{"annotations":[74641,75683,80712,73204],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000379"}]},"cv_name":"biological_process","definition":"Splicing of RNA via recognition of the folded RNA structure that brings the 5' and 3' splice sites into proximity and cleavage of the RNA at both the 3' and 5' splice sites by an endonucleolytic mechanism, followed by ligation of the exons.","definition_xrefs":["ISBN:0879695897","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA splicing","termid":"GO:0008380"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00754":null,"SJAG_00956":null,"SJAG_01260":null,"SJAG_01791":null,"SJAG_03328":null,"SJAG_03913":null,"SJAG_04907":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"RNA splicing, via endonucleolytic cleavage and ligation","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"mRNA splicing","type":"broad"}],"termid":"GO:0000394","terms_by_termid":{"GO:0000379":null,"GO:0006388":null}}


id: PBO:0026790
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_caspofungin","termid":"PBO:0026790"}


id: MONDO:0015980
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare genetic gynecological and obstetrical diseases (obsolete MONDO:0015980)","secondary_identifiers":["Orphanet:183731"],"synonyms":[{"name":"rare genetic female reproductive system disease","type":"exact"}],"termid":"MONDO:0015980","xrefs":{"Monarch":{"xref_id":"0015980"}}}


id: PR:Q11120
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ofd1 gene.","definition_xrefs":["UniProtKB:Q11120","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolyl 3,4-dihydroxylase ofd1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC6B1.08c","synonyms":[{"name":"2-oxoglutarate and Fe(II) dioxygenase domain-containing protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PKHD-type hydroxylase ofd1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ofd1","type":"exact"}],"termid":"PR:Q11120"}


id: GO:0035248
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of an N-acetylgalactosaminyl residue from UDP-N-acetyl-galactosamine to an acceptor molecule, forming an alpha-1,4 linkage.","definition_xrefs":["PMID:15130086"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylgalactosaminyltransferase activity","termid":"GO:0008376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"alpha-1,4-N-acetylgalactosaminyltransferase activity","synonyms":[{"name":"alpha-1,4-GalNAc transferase activity","type":"exact"}],"termid":"GO:0035248"}


id: FYPO:0002793
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain fewer vacuoles than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"vacuoles present in decreased numbers during vegetative growth","synonyms":[{"name":"decreased level of vacuoles during vegetative growth","type":"related"},{"name":"fewer vacuoles present during vegetative growth","type":"exact"},{"name":"vacuoles present in decreased numbers during mitotic cell cycle","type":"related"},{"name":"vacuoles present in reduced numbers during vegetative growth","type":"exact"}],"termid":"FYPO:0002793"}


id: PBO:0049088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 143","termid":"PBO:0049088"}


id: GO:0070944
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed killing of a bacterium by a neutrophil.","definition_xrefs":["GOC:add","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutrophil-mediated killing of symbiont cell","termid":"GO:0070943"},{"relation_name":"part_of","term_name":"defense response to bacterium","termid":"GO:0042742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neutrophil-mediated killing of bacterium","synonyms":[{"name":"neutrophil mediated killing of bacterium","type":"exact"}],"termid":"GO:0070944"}


id: PBO:0059649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 15","termid":"PBO:0059649"}


id: MONDO:0001782
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cataract that produces swelling and opacity of the entire lens; cataracts are removed before maturity.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"senile cataract","termid":"MONDO:0004847"},{"relation_name":"is_a","term_name":"cataract","termid":"MONDO:0005129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"mature cataract","secondary_identifiers":["MEDGEN:784053","SCTID:849000","ICD9:366.17","DOID:13717","UMLS:C3665439"],"synonyms":[{"name":"total or mature cataract","type":"exact"},{"name":"total, mature senile cataract","type":"exact"}],"termid":"MONDO:0001782","xrefs":{"Monarch":{"xref_id":"0001782"}}}


id: PR:Q9USP2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ynd1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USP2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi apyrase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC11E10.05c","synonyms":[{"name":"ADPase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ATP-diphosphatase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ATP-diphosphohydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Golgi nucleoside diphosphatase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ynd1","type":"exact"},{"name":"adenosine diphosphatase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USP2"}


id: PBO:0076150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUFU negative regulator of hedgehog signaling","termid":"PBO:0076150"}


id: PBO:0064555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-)","termid":"PBO:0064555"}


id: PBO:0082596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Class I histone deacetylase (HDAC) family member; deacetylates Smc3p on lysine residues at anaphase onset; has sequence similarity to Hda1p, Rpd3p, Hos2p, and Hos3p; interacts with the Tup1p-Ssn6p corepressor complex","termid":"PBO:0082596"}


id: FYPO:0003550
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell during one or both meiotic nuclear divisions is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during meiotic cell cycle","termid":"FYPO:0004991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein level during meiosis","synonyms":[{"name":"decreased protein accumulation during meiosis","type":"related"},{"name":"decreased protein level during meiotic nuclear division","type":"exact"},{"name":"reduced protein level during meiosis","type":"exact"}],"termid":"FYPO:0003550"}


id: MONDO:1010639
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Factor XII deficiency that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"factor XII deficiency, non-human animal","termid":"MONDO:1010074"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"factor XII deficiency, dog","secondary_identifiers":["OMIA:000364-9615"],"termid":"MONDO:1010639","xrefs":{"Monarch":{"xref_id":"1010639"}}}


id: GO:0070558
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphaM-beta2 integrin complex bound to membrane protein CD63, a member of the tetraspan family.","definition_xrefs":["PMID:8871662"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"alphaM-beta2 integrin-CD63 complex","synonyms":[{"name":"ITGAM-ITGB2-CD63 complex","type":"narrow"}],"termid":"GO:0070558"}


id: PBO:0035933
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein-protein_interaction_during_cellular_response_to_hypoxia","termid":"PBO:0035933"}


id: PBO:0088957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi alpha-1,2-mannosyltransferase Omh1","termid":"PBO:0088957"}


id: MONDO:0013568
data:
  {"annotated_genes":["SJAG_02431","SJAG_03703"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89121,89122],"is_not":false,"summary":null,"term":"MONDO:0013568"}]},"cv_name":"mondo","definition":"Any familial sick sinus syndrome in which the cause of the disease is a mutation in the MYH6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03703":null},"genotype_count":0,"is_obsolete":false,"name":"sick sinus syndrome 3, susceptibility to","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:481421","OMIM:614090","UMLS:C3279791"],"synonyms":[{"name":"MYH6 familial sick sinus syndrome","type":"exact"},{"name":"SSS3","type":"related"},{"name":"familial sick sinus syndrome caused by mutation in MYH6","type":"exact"},{"name":"sick sinus syndrome 3","type":"exact"},{"name":"sick sinus syndrome 3, susceptibility to","type":"exact"},{"name":"susceptibility to sick sinus syndrome 3","type":"related"}],"termid":"MONDO:0013568","terms_by_termid":{"MONDO:0013568":null},"xrefs":{"Monarch":{"xref_id":"0013568"}}}


id: PBO:0112808
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gocam_id","termid":"PBO:0112808"}


id: MONDO:1012964
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Charcot-Marie-Tooth disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral neuropathy, non-human animal","termid":"MONDO:1010239"},{"relation_name":"is_a","term_name":"hereditary neurological disease, non-human animal","termid":"MONDO:1012972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Charcot-Marie-Tooth disease, non-human animal","termid":"MONDO:1012964","xrefs":{"Monarch":{"xref_id":"1012964"}}}


id: GO:1904406
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of nitric oxide metabolic process.","definition_xrefs":["PMID:11991626","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of nitric oxide metabolic process","termid":"GO:0080164"},{"relation_name":"negatively_regulates","term_name":"nitric oxide metabolic process","termid":"GO:0046209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of nitric oxide metabolic process","synonyms":[{"name":"down regulation of nitric oxide metabolic process","type":"exact"},{"name":"down regulation of nitric oxide metabolism","type":"exact"},{"name":"down-regulation of nitric oxide metabolic process","type":"exact"},{"name":"down-regulation of nitric oxide metabolism","type":"exact"},{"name":"downregulation of nitric oxide metabolic process","type":"exact"},{"name":"downregulation of nitric oxide metabolism","type":"exact"},{"name":"inhibition of nitric oxide metabolic process","type":"narrow"},{"name":"inhibition of nitric oxide metabolism","type":"narrow"},{"name":"negative regulation of nitric oxide metabolism","type":"exact"}],"termid":"GO:1904406"}


id: PBO:0076114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STX18 intronic transcript 1","termid":"PBO:0076114"}


id: FYPO:0001966
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to aculeacin A. Cells stop growing (and may die) at a concentration of aculeacin A that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002683","FYPO:0001985","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to aculeacin A","synonyms":[{"name":"hypersensitive to aculeacin A","type":"exact"},{"name":"sensitive to aculeacin A during mitotic cell cycle","type":"related"},{"name":"sensitive to aculeacin A during vegetative growth","type":"exact"}],"termid":"FYPO:0001966"}


id: MONDO:0001080
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute form of gonococcal cervicitis.","definition_xrefs":["MONDO:patterns/acute"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute cervicitis","termid":"MONDO:0001081"},{"relation_name":"is_a","term_name":"gonococcal cervicitis","termid":"MONDO:0021157"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute gonococcal cervicitis","secondary_identifiers":["icd11.foundation:2071927498","DOID:10615","MEDGEN:509197","SCTID:20943002","UMLS:C0153195","ICD9:098.15"],"synonyms":[{"name":"acute gonorrhea of cervix","type":"exact"},{"name":"acute gonorrhoea of cervix","type":"exact"},{"name":"gonococcal cervicitis (acute)","type":"exact"},{"name":"gonococcal cervicitis, acute","type":"exact"}],"termid":"MONDO:0001080","xrefs":{"Monarch":{"xref_id":"0001080"}}}


id: MONDO:0015295
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Intractable diarrhea-choanal atresia-eye anomalies syndrome is characterized by the association of intractable diarrhea of infancy with choanal atresia. Short stature, a prominent and broad nasal bridge, micrognathia, single palmar creases, chronic corneal inflammation, cytopenia, and abnormal hair texture were also reported. So far, the syndrome has been described in three children from the same family. The absence of intellectual deficit and immune deficiency allow this syndrome to be distinguished from other forms of intractable diarrhea of infancy described previously.","definition_xrefs":["Orphanet:137622"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"intractable diarrhea-choanal atresia-eye anomalies syndrome","secondary_identifiers":["MEDGEN:929976","GARD:19882","UMLS:C4304307"],"termid":"MONDO:0015295","xrefs":{"Monarch":{"xref_id":"0015295"}}}


id: FYPO:0003181
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which generation of double-strand breaks at defined hotspots throughout the genome during meiosis I does not occur.","definition_xrefs":["PomBase:mah","GO:0042138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic DNA double-strand break formation","termid":"FYPO:0003564"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000631","FYPO:0000293"],"is_obsolete":false,"name":"abolished meiotic DNA double-strand break formation","synonyms":[{"name":"absent meiotic DNA double-strand break formation","type":"exact"},{"name":"meiotic DNA double-strand break formation abolished","type":"exact"}],"termid":"FYPO:0003181"}


id: PBO:0045594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 5 (pseudogene)","termid":"PBO:0045594"}


id: MONDO:0025003
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diseases of the domestic or wild goat of the genus Capra.","definition_xrefs":["MESH:D015511"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"goat disease","synonyms":[{"name":"caprine disease","type":"related"},{"name":"caprine diseases","type":"related"},{"name":"disease, caprine","type":"related"},{"name":"disease, goat","type":"related"},{"name":"diseases, caprine","type":"related"},{"name":"diseases, goat","type":"related"},{"name":"goat disease","type":"exact"}],"termid":"MONDO:0025003","xrefs":{"Monarch":{"xref_id":"0025003"}}}


id: PBO:0055472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2905","termid":"PBO:0055472"}


id: MONDO:0004717
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A vascular disease of the liver characterized by the occurrence of multiple blood-filled cysts or cavities. The cysts are lined with endothelial cells; the cavities lined with hepatic parenchymal cells (hepatocytes). Peliosis hepatis has been associated with use of anabolic steroids (anabolic agents) and certain drugs.","definition_xrefs":["MESH:D010382"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hepatic vascular disorder","termid":"MONDO:0002405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"peliosis hepatis","secondary_identifiers":["UMLS:C0030781","SCTID:58008004","DOID:914","ICD10CM:K76.4","icd11.foundation:1210061614","EFO:1001387","MEDGEN:10618"],"synonyms":[{"name":"hepatic peliosis","type":"exact"}],"termid":"MONDO:0004717","xrefs":{"Monarch":{"xref_id":"0004717"}}}


id: GO:0004167
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-dopachrome = 5,6-dihydroxyindole-2-carboxylate.","definition_xrefs":["EC:5.3.3.12","RHEA:13041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, transposing C=C bonds","termid":"GO:0016863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"dopachrome isomerase activity","secondary_identifiers":["GO:0048059","MetaCyc:DOPACHROME-DELTA-ISOMERASE-RXN","KEGG_REACTION:R03673"],"synonyms":[{"name":"DCF activity","type":"related"},{"name":"DCT activity","type":"related"},{"name":"L-dopachrome isomerase activity","type":"related"},{"name":"L-dopachrome keto-enol isomerase activity","type":"related"},{"name":"L-dopachrome-methyl ester tautomerase activity","type":"related"},{"name":"TRP activity","type":"related"},{"name":"TRP-1","type":"related"},{"name":"TRP-2","type":"related"},{"name":"TRP2","type":"related"},{"name":"dopachrome Delta(7),Delta(2)-isomerase activity","type":"related"},{"name":"dopachrome conversion activity","type":"broad"},{"name":"dopachrome conversion factor activity","type":"broad"},{"name":"dopachrome delta-isomerase activity","type":"exact"},{"name":"dopachrome delta7,Delta2-isomerase activity","type":"related"},{"name":"dopachrome keto-enol isomerase activity","type":"related"},{"name":"dopachrome oxidoreductase activity","type":"related"},{"name":"dopachrome rearranging enzyme activity","type":"related"},{"name":"dopachrome tautomerase activity","type":"related"},{"name":"dopachrome-rearranging enzyme","type":"related"},{"name":"tryosinase-related protein-2","type":"related"},{"name":"tyrosinase-related protein 2 activity","type":"related"}],"termid":"GO:0004167"}


id: PBO:0077930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPTE2 pseudogene 3","termid":"PBO:0077930"}


id: MONDO:1011261
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any achromatopsia that occurs in sheep due to a mutation in the CNGA3 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"achromatopsia, non-human animal","termid":"MONDO:1012578"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"achromatopsia, CNGA3-related, sheep","secondary_identifiers":["OMIA:001481-9940"],"synonyms":[{"name":"achromatopsia-2 CNGA3-related, sheep","type":"related"}],"termid":"MONDO:1011261","xrefs":{"Monarch":{"xref_id":"1011261"}}}


id: GO:0060696
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of phospholipid catabolism, the chemical reactions and pathways resulting in the breakdown of phospholipids, any lipid containing phosphoric acid as a mono- or diester.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid catabolic process","termid":"GO:0050994"},{"relation_name":"is_a","term_name":"regulation of phospholipid metabolic process","termid":"GO:1903725"},{"relation_name":"regulates","term_name":"phospholipid catabolic process","termid":"GO:0009395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"regulation of phospholipid catabolic process","termid":"GO:0060696"}


id: GO:0180046
data:
  {"annotated_genes":["SJAG_06383","SJAG_01227","SJAG_03292","SJAG_04975","SJAG_02776","SJAG_02804","SJAG_03115","SJAG_01416","SJAG_05278","SJAG_03066","SJAG_00068","SJAG_04924","SJAG_00831","SJAG_00295","SJAG_02523","SJAG_03878","SJAG_03672","SJAG_04119","SJAG_01860","SJAG_05327","SJAG_00846","SJAG_03506","SJAG_06425","SJAG_04337","SJAG_01570","SJAG_02488","SJAG_03801","SJAG_04881","SJAG_04165","SJAG_02913"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72553,76289,76291,77093,72313],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016255"},{"annotations":[79222,58592,58606,79414,89244,79211,74604,75198,80020,78117,78901,94810,73629,71561,74881,79641,58179,78165,77228,79384,91369,105530,63415,105592,58431,64328,76707,61271,77244,64535],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006506"}]},"cv_name":"biological_process","definition":"Any process leading to the post-translational modification of a protein with a GPI anchor to achieve full functional capacity of the protein.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein maturation","termid":"GO:0051604"}],"gene_count":30,"genes_by_uniquename":{"SJAG_00068":null,"SJAG_00295":null,"SJAG_00831":null,"SJAG_00846":null,"SJAG_01227":null,"SJAG_01416":null,"SJAG_01570":null,"SJAG_01860":null,"SJAG_02488":null,"SJAG_02523":null,"SJAG_02776":null,"SJAG_02804":null,"SJAG_02913":null,"SJAG_03066":null,"SJAG_03115":null,"SJAG_03292":null,"SJAG_03506":null,"SJAG_03672":null,"SJAG_03801":null,"SJAG_03878":null,"SJAG_04119":null,"SJAG_04165":null,"SJAG_04337":null,"SJAG_04881":null,"SJAG_04924":null,"SJAG_04975":null,"SJAG_05278":null,"SJAG_05327":null,"SJAG_06383":null,"SJAG_06425":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051604","GO:0010467"],"is_obsolete":false,"name":"GPI anchored protein biosynthesis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"termid":"GO:0180046","terms_by_termid":{"GO:0006506":null,"GO:0016255":null}}


id: PBO:0089730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP I, II and III complex subunit Trs31","termid":"PBO:0089730"}


id: FYPO:0005828
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein transport along microtubules to the cell tip is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cell tip during vegetative growth","termid":"FYPO:0001587"},{"relation_name":"is_a","term_name":"normal protein transport along microtubule during vegetative growth","termid":"FYPO:0005827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0000138","FYPO:0001312"],"is_obsolete":false,"name":"normal protein transport along microtubule to cell tip during vegetative growth","synonyms":[{"name":"normal protein movement along microtubule to cell tip during vegetative growth","type":"exact"},{"name":"normal protein transport along microtubule to cell tip during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005828"}


id: GO:1902197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of isovaleryl-CoA(4-).","definition_xrefs":["GOC:TermGenie","PMID:11231285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty-acyl-CoA biosynthetic process","termid":"GO:0046949"},{"relation_name":"is_a","term_name":"isovaleryl-CoA(4-) metabolic process","termid":"GO:1902195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150","GO:0055086","GO:0006790"],"is_obsolete":false,"name":"isovaleryl-CoA(4-) biosynthetic process","synonyms":[{"name":"isovaleryl-CoA(4-) anabolism","type":"exact"},{"name":"isovaleryl-CoA(4-) biosynthesis","type":"exact"},{"name":"isovaleryl-CoA(4-) formation","type":"exact"},{"name":"isovaleryl-CoA(4-) synthesis","type":"exact"}],"termid":"GO:1902197"}


id: GO:0003294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The reorganization or renovation of heart tissue that contributes to the maturation of the connection between an atrium and a ventricle.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue remodeling","termid":"GO:0048771"},{"relation_name":"part_of","term_name":"heart morphogenesis","termid":"GO:0003007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrial ventricular junction remodeling","synonyms":[{"name":"atrial ventricular junction remodelling","type":"exact"},{"name":"atrio-ventricular junction remodeling","type":"related"},{"name":"atrioventricular junction remodeling","type":"exact"}],"termid":"GO:0003294"}


id: PBO:0061807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"outer dense fiber of sperm tails 4","termid":"PBO:0061807"}


id: GO:1902324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of methyl-branched fatty acid biosynthetic process.","definition_xrefs":["GOC:kmv","GOC:TermGenie","PMID:15340492"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of fatty acid biosynthetic process","termid":"GO:0045723"},{"relation_name":"is_a","term_name":"regulation of methyl-branched fatty acid biosynthetic process","termid":"GO:1902322"},{"relation_name":"positively_regulates","term_name":"methyl-branched fatty acid biosynthetic process","termid":"GO:1902321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"positive regulation of methyl-branched fatty acid biosynthetic process","synonyms":[{"name":"activation of methyl-branched fatty acid anabolism","type":"narrow"},{"name":"activation of methyl-branched fatty acid biosynthesis","type":"narrow"},{"name":"activation of methyl-branched fatty acid biosynthetic process","type":"narrow"},{"name":"activation of methyl-branched fatty acid formation","type":"narrow"},{"name":"activation of methyl-branched fatty acid synthesis","type":"narrow"},{"name":"positive regulation of methyl-branched fatty acid anabolism","type":"exact"},{"name":"positive regulation of methyl-branched fatty acid biosynthesis","type":"exact"},{"name":"positive regulation of methyl-branched fatty acid formation","type":"exact"},{"name":"positive regulation of methyl-branched fatty acid synthesis","type":"exact"},{"name":"up regulation of methyl-branched fatty acid anabolism","type":"exact"},{"name":"up regulation of methyl-branched fatty acid biosynthesis","type":"exact"},{"name":"up regulation of methyl-branched fatty acid biosynthetic process","type":"exact"},{"name":"up regulation of methyl-branched fatty acid formation","type":"exact"},{"name":"up regulation of methyl-branched fatty acid synthesis","type":"exact"},{"name":"up-regulation of methyl-branched fatty acid anabolism","type":"exact"},{"name":"up-regulation of methyl-branched fatty acid biosynthesis","type":"exact"},{"name":"up-regulation of methyl-branched fatty acid biosynthetic process","type":"exact"},{"name":"up-regulation of methyl-branched fatty acid formation","type":"exact"},{"name":"up-regulation of methyl-branched fatty acid synthesis","type":"exact"},{"name":"upregulation of methyl-branched fatty acid anabolism","type":"exact"},{"name":"upregulation of methyl-branched fatty acid biosynthesis","type":"exact"},{"name":"upregulation of methyl-branched fatty acid biosynthetic process","type":"exact"},{"name":"upregulation of methyl-branched fatty acid formation","type":"exact"},{"name":"upregulation of methyl-branched fatty acid synthesis","type":"exact"}],"termid":"GO:1902324"}


id: MONDO:0014697
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any common variable immunodeficiency in which the cause of the disease is a mutation in the NFKB1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"common variable immunodeficiency","termid":"MONDO:0015517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency, common variable, 12","secondary_identifiers":["GARD:16141","DOID:0081154","MEDGEN:906018","OMIM:616576","UMLS:C4225277"],"synonyms":[{"name":"CVID12","type":"related"},{"name":"NFKB1 common variable immunodeficiency","type":"exact"},{"name":"NFKB1 deficiency","type":"related"},{"name":"common variable immunodeficiency caused by mutation in NFKB1","type":"exact"},{"name":"immunodeficiency, common variable, 12","type":"exact"},{"name":"immunodeficiency, common variable, type 12","type":"exact"}],"termid":"MONDO:0014697","xrefs":{"Monarch":{"xref_id":"0014697"}}}


id: PBO:0059731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 5","termid":"PBO:0059731"}


id: MONDO:0009416
data:
  {"annotated_genes":["SJAG_04206","SJAG_02426","SJAG_04394"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86816,86817,86818],"is_not":false,"summary":null,"term":"MONDO:0009416"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"},{"relation_name":"is_a","term_name":"overgrowth syndrome","termid":"MONDO:0019716"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02426":null,"SJAG_04206":null,"SJAG_04394":null},"genotype_count":0,"is_obsolete":false,"name":"hypoinsulinemic hypoglycemia and body hemihypertrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:293964","DOID:0112263","OMIM:240900","GARD:17352","UMLS:C3278384","MEDGEN:480014"],"synonyms":[{"name":"HIHGHH","type":"related"},{"name":"hypoinsulinemic hypoglycemia with hemihypertrophy","type":"related"}],"termid":"MONDO:0009416","terms_by_termid":{"MONDO:0009416":null},"xrefs":{"Monarch":{"xref_id":"0009416"}}}


id: PATO:0001735
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer's parts having the arrangement which exhibits characteristics of liquids.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quality of a liquid","termid":"PATO:0001548"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"liquid configuration","synonyms":[{"name":"liquid","type":"exact"}],"termid":"PATO:0001735"}


id: FYPO:0002920
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 36 of histone H3 is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone methylation during vegetative growth","termid":"FYPO:0000861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal histone H3-K36 methylation during vegetative growth","synonyms":[{"name":"normal histone H3 K36 methylation during vegetative growth","type":"exact"},{"name":"normal histone H3-K36 methylation during mitotic cell cycle","type":"related"},{"name":"normal histone H3K36me during vegetative growth","type":"exact"},{"name":"normal histone lysine H3 K36 methylation during vegetative growth","type":"exact"}],"termid":"FYPO:0002920"}


id: GO:0098824
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The sulfation of peptidyl-cysteine to form S-sulfo-L-cysteine.","definition_xrefs":["RESID:AA0171"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-cysteine sulfation (obsolete GO:0098824)","termid":"GO:0098824"}


id: MONDO:0015031
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Extraneural perineurioma is a rare tumor of cranial and spinal nerves arising from peripheral nerve sheet and composed exclusively or predominantly of cells showing perineurial differentiation. It presents as a well-circumscribed, rarely encapsulated mass, not associated with a recognizable nerve, most commonly arising in the dermis and subcutis of the extremities or trunk, or, rarely, in deep soft tissue or skin (e.g., in the stomach, kidney, pancreas, maxillary sinus, mandible, bronchial tree and the face). The clinical presentation depends on the localization.","definition_xrefs":["Orphanet:100002"],"direct_ancestors":[{"relation_name":"is_a","term_name":"perineurioma","termid":"MONDO:0019404"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extraneural perineurioma","secondary_identifiers":["UMLS:C4708595","GARD:19730","icd11.foundation:691853283","MEDGEN:1643216","NCIT:C6912","SCTID:768926005"],"synonyms":[{"name":"soft tissue perineurioma","type":"exact"}],"termid":"MONDO:0015031","xrefs":{"Monarch":{"xref_id":"0015031"}}}


id: PBO:0028993
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_proline_import","termid":"PBO:0028993"}


id: PBO:0112753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"agmatinase 3, Agm3","termid":"PBO:0112753"}


id: PBO:0080887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"yrdC N(6)-threonylcarbamoyltransferase domain containing pseudogene 3","termid":"PBO:0080887"}


id: PBO:0048957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycoprotein Ib platelet subunit alpha","termid":"PBO:0048957"}


id: MONDO:1010458
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypertrophic cardiomyopathy that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypertrophic cardiomyopathy, non-human animal","termid":"MONDO:1010015"},{"relation_name":"is_a","term_name":"cardiomyopathy, dog","termid":"MONDO:1010441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertrophic cardiomyopathy, dog","secondary_identifiers":["OMIA:000515-9615"],"termid":"MONDO:1010458","xrefs":{"Monarch":{"xref_id":"1010458"}}}


id: GO:0046424
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ferulic acid + NADPH + H+ + O2 = 5-hydroxyferulic acid + H2O + NADP+.","definition_xrefs":["PMID:8692910","PMID:9880351"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H","termid":"GO:0016651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"ferulate 5-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-1121"],"termid":"GO:0046424"}


id: MONDO:0016877
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of chromosome 12","termid":"MONDO:0017277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial deletion of the long arm of chromosome 12","secondary_identifiers":["MEDGEN:1826014","GARD:20800","UMLS:C5679656","Orphanet:261821","icd11.foundation:1206066048"],"synonyms":[{"name":"partial deletion of chromosome 12q","type":"exact"},{"name":"partial deletion of the long arm of chromosome type 12","type":"exact"},{"name":"partial monosomy of chromosome 12q","type":"exact"},{"name":"partial monosomy of the long arm of chromosome 12","type":"exact"}],"termid":"MONDO:0016877","xrefs":{"Monarch":{"xref_id":"0016877"}}}


id: PBO:0070560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 26","termid":"PBO:0070560"}


id: PBO:0028437
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_miconazole","termid":"PBO:0028437"}


id: PBO:0076877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TEX28 pseudogene 1","termid":"PBO:0076877"}


id: PBO:0051562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IL12A antisense RNA 1","termid":"PBO:0051562"}


id: PATO:0001932
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A pattern quality inhering in a bearer by virtue of the bearer's being placed alternately one above the other.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regular spatial pattern","termid":"PATO:0000440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alternate placement","termid":"PATO:0001932"}


id: MONDO:0008962
data:
  {"annotated_genes":["SJAG_03011","SJAG_00938"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88838,88839],"is_not":false,"summary":null,"term":"MONDO:0008962"}]},"cv_name":"mondo","definition":"A Griscelli syndrome characterized by silvery gray sheen of the hair, hypopigmentation of the skin and neurological impairment without immunodeficiency that has material basis in mutations in the MYO5A gene on chromosome 15q21.2.","definition_xrefs":["DOID:0060832","PMID:9207796","PMID:12452176"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Griscelli syndrome","termid":"MONDO:0018306"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_03011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005093"],"is_obsolete":false,"name":"Griscelli syndrome type 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:214450","MESH:C537301","ICD10CM:E70.3","icd11.foundation:875700770","UMLS:C1859194","GARD:2566","MEDGEN:347092","Orphanet:79476"],"synonyms":[{"name":"GS1","type":"exact"},{"name":"Griscelli disease type 1","type":"related"},{"name":"Griscelli syndrome type 1","type":"exact"},{"name":"Griscelli syndrome with neurologic impairment","type":"related"},{"name":"Griscelli syndrome with neurological impairment","type":"exact"},{"name":"Griscelli syndrome, cutaneous and neurologic type","type":"related"},{"name":"Griscelli syndrome, cutaneous and neurological type","type":"exact"},{"name":"Griscelli syndrome, type 1","type":"related"},{"name":"Griscelli-PruniC)ras syndrome type 1","type":"exact"},{"name":"Griscelli-Pruniéras syndrome type 1","type":"exact"},{"name":"hypopigmentation-neurologic impairment syndrome","type":"exact"},{"name":"partial albinism and primary neurologic disease without hemophagocytic syndrome","type":"related"},{"name":"pigmentary dilution of the skin and hair, the presence of large clumps of pigment in hair shafts","type":"related"}],"termid":"MONDO:0008962","terms_by_termid":{"MONDO:0008962":null},"xrefs":{"Monarch":{"xref_id":"0008962"}}}


id: MONDO:1012340
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chronic valvular disease, non-human animal","termid":"MONDO:1011647"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic valvular disease, dog","secondary_identifiers":["OMIA:001246-9615"],"termid":"MONDO:1012340","xrefs":{"Monarch":{"xref_id":"1012340"}}}


id: PBO:0003162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N alpha-acetylation related protein Nat2 (predicted)","termid":"PBO:0003162"}


id: GO:0060165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process controlling the timing and/or rate at which a relatively unspecialized cell in the subpallium acquires features of a neuron. The subpallium is the base region of the telencephalon.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of timing of neuron differentiation","termid":"GO:0060164"},{"relation_name":"part_of","term_name":"subpallium development","termid":"GO:0021544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of timing of subpallium neuron differentiation","termid":"GO:0060165"}


id: MONDO:0014048
data:
  {"annotated_genes":["SJAG_04394","SJAG_02426","SJAG_04206"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87024,87025,87026],"is_not":false,"summary":null,"term":"MONDO:0014048"}]},"cv_name":"mondo","definition":"Any Cowden disease in which the cause of the disease is a mutation in the AKT1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Cowden disease","termid":"MONDO:0016063"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02426":null,"SJAG_04206":null,"SJAG_04394":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0000426"],"is_obsolete":false,"name":"Cowden syndrome 6","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:767433","UMLS:C3554519","OMIM:615109","DOID:0081002","GARD:16465"],"synonyms":[{"name":"AKT1 Cowden disease","type":"exact"},{"name":"CWS6","type":"related"},{"name":"Cowden disease caused by mutation in AKT1","type":"exact"},{"name":"Cowden syndrome 6","type":"exact"},{"name":"Cowden syndrome type 6","type":"exact"}],"termid":"MONDO:0014048","terms_by_termid":{"MONDO:0014048":null},"xrefs":{"Monarch":{"xref_id":"0014048"}}}


id: PBO:0070603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 71","termid":"PBO:0070603"}


id: PR:O14130
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC3C7.04 gene.","definition_xrefs":["UniProtKB:O14130","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C3C7.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3C7.04","synonyms":[{"name":"Spom972h-SPAC3C7.04","type":"exact"}],"termid":"PR:O14130"}


id: PBO:0040057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein 2/3 complex subunit 3 pseudogene 5","termid":"PBO:0040057"}


id: MONDO:0018400
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare female infertility due to an adrenal disorder (obsolete MONDO:0018400)","secondary_identifiers":["Orphanet:399849"],"termid":"MONDO:0018400","xrefs":{"Monarch":{"xref_id":"0018400"}}}


id: FYPO:0001829
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cells grow normally (i.e. indistinguishably from wild type) in a medium containing gluconate as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000139","FYPO:0002058","FYPO:0002060","FYPO:0000003","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on gluconate carbon source","synonyms":[{"name":"normal cell population growth on gluconate carbon source","type":"exact"},{"name":"normal vegetative cell population growth on gluconate carbon source","type":"exact"}],"termid":"FYPO:0001829"}


id: PBO:0088844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endonuclease activator Ctp1","termid":"PBO:0088844"}


id: PBO:0078412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (CCC) 6-1","termid":"PBO:0078412"}


id: PBO:0078742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRMT2B antisense RNA 1","termid":"PBO:0078742"}


id: GO:1905461
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of vascular associated smooth muscle cell apoptotic process.","definition_xrefs":["GOC:BHF","GOC:BHF_miRNA","GO_REF:0000058","GOC:rph","PMID:26493107","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of smooth muscle cell apoptotic process","termid":"GO:0034393"},{"relation_name":"is_a","term_name":"regulation of vascular associated smooth muscle cell apoptotic process","termid":"GO:1905459"},{"relation_name":"positively_regulates","term_name":"vascular associated smooth muscle cell apoptotic process","termid":"GO:1905288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of vascular associated smooth muscle cell apoptotic process","synonyms":[{"name":"activation of VSMC apoptosis","type":"narrow"},{"name":"activation of VSMC apoptotic process","type":"narrow"},{"name":"activation of vascular associated smooth muscle cell apoptosis","type":"narrow"},{"name":"activation of vascular associated smooth muscle cell apoptotic process","type":"narrow"},{"name":"activation of vascular smooth muscle cell apoptosis","type":"narrow"},{"name":"activation of vascular smooth muscle cell apoptotic process","type":"narrow"},{"name":"positive regulation of VSMC apoptosis","type":"narrow"},{"name":"positive regulation of VSMC apoptotic process","type":"exact"},{"name":"positive regulation of vascular associated smooth muscle cell apoptosis","type":"narrow"},{"name":"positive regulation of vascular smooth muscle cell apoptosis","type":"narrow"},{"name":"positive regulation of vascular smooth muscle cell apoptotic process","type":"exact"},{"name":"up regulation of VSMC apoptosis","type":"narrow"},{"name":"up regulation of VSMC apoptotic process","type":"exact"},{"name":"up regulation of vascular associated smooth muscle cell apoptosis","type":"narrow"},{"name":"up regulation of vascular associated smooth muscle cell apoptotic process","type":"exact"},{"name":"up regulation of vascular smooth muscle cell apoptosis","type":"narrow"},{"name":"up regulation of vascular smooth muscle cell apoptotic process","type":"exact"},{"name":"up-regulation of VSMC apoptosis","type":"narrow"},{"name":"up-regulation of VSMC apoptotic process","type":"exact"},{"name":"up-regulation of vascular associated smooth muscle cell apoptosis","type":"narrow"},{"name":"up-regulation of vascular associated smooth muscle cell apoptotic process","type":"exact"},{"name":"up-regulation of vascular smooth muscle cell apoptosis","type":"narrow"},{"name":"up-regulation of vascular smooth muscle cell apoptotic process","type":"exact"},{"name":"upregulation of VSMC apoptosis","type":"narrow"},{"name":"upregulation of VSMC apoptotic process","type":"exact"},{"name":"upregulation of vascular associated smooth muscle cell apoptosis","type":"narrow"},{"name":"upregulation of vascular associated smooth muscle cell apoptotic process","type":"exact"},{"name":"upregulation of vascular smooth muscle cell apoptosis","type":"narrow"},{"name":"upregulation of vascular smooth muscle cell apoptotic process","type":"exact"}],"termid":"GO:1905461"}


id: MONDO:1012796
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any polyneuropathy that occurs in dogs due to a mutation in the NDRG1 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"polyneuropathy, dog","termid":"MONDO:1012354"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyneuropathy, NDRG1-related, dog","secondary_identifiers":["OMIA:002120-9615"],"termid":"MONDO:1012796","xrefs":{"Monarch":{"xref_id":"1012796"}}}


id: PBO:0063473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein disulfide isomerase family A member 3","termid":"PBO:0063473"}


id: PBO:0027482
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_glutathione_level_during_G0","termid":"PBO:0027482"}


id: PBO:0059263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L30","termid":"PBO:0059263"}


id: PR:000050401
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A spindle pole body-associated protein cut12 (Schizosaccharomyces pombe) that has been phosphorylated at positions equivalent to Thr-78 of the amino acid sequence represented by UniProtKB:O59755. Example: UniProtKB:O59755, Thr-78, MOD:00047.","definition_xrefs":["PMID:23333317","PomBase:VW","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle pole body-associated protein cut12 (Schizosaccharomyces pombe)","termid":"PR:000050397"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle pole body-associated protein cut12 phosphorylated 3 (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC649.05","synonyms":[{"name":"Spom-cut12/Phos:3","type":"exact"},{"name":"UniProtKB:O59755, Thr-78, MOD:00047","type":"narrow"}],"termid":"PR:000050401"}


id: PBO:0046615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group PABLB member 1, envelope","termid":"PBO:0046615"}


id: GO:0044430
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of the cytoskeleton, a cellular scaffolding or skeleton that maintains cell shape, enables some cell motion (using structures such as flagella and cilia), and plays important roles in both intra-cellular transport (e.g. the movement of vesicles and organelles) and cellular division. Includes constituent parts of intermediate filaments, microfilaments, microtubules, and the microtrabecular lattice.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cytoskeletal part (obsolete GO:0044430)","secondary_identifiers":["NIF_Subcellular:sao1635329413"],"synonyms":[{"name":"cytoskeletal element","type":"exact"},{"name":"cytoskeleton component","type":"exact"}],"termid":"GO:0044430"}


id: _global:enables_subfunction
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"Holds between an entity and an process P where the entity enables some larger compound process, and that larger process has-part P.","direct_ancestors":[{"relation_name":"is_a","term_name":"functionally_related_to","termid":"_global:functionally_related_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enables_subfunction","secondary_identifiers":["RO:0004031"],"termid":"_global:enables_subfunction"}


id: GO:0019756
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cyanogenic glycosides, any glycoside containing a cyano group that is released as hydrocyanic acid on acid hydrolysis; such compounds occur in the kernels of various fruits.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside biosynthetic process","termid":"GO:0016138"},{"relation_name":"is_a","term_name":"cyanogenic glycoside metabolic process","termid":"GO:0042341"},{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"nitrile biosynthetic process","termid":"GO:0080028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"cyanogenic glycoside biosynthetic process","synonyms":[{"name":"cyanogenic glycoside anabolism","type":"exact"},{"name":"cyanogenic glycoside biosynthesis","type":"exact"},{"name":"cyanogenic glycoside formation","type":"exact"},{"name":"cyanogenic glycoside synthesis","type":"exact"}],"termid":"GO:0019756"}


id: GO:0005697
data:
  {"annotated_genes":["SJAG_04586","SJAG_01378","SJAG_03070","SJAG_02469","SJAG_01720","SJAG_01819","SJAG_05240","SJAG_05979","SJAG_01327","SJAG_00559","SJAG_03460","SJAG_03954","SJAG_00939"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71377,71644,92444,97635,108175,109874,109957,110372,114739,116795,117727,118259],"is_not":false,"summary":null,"term":"GO:0005697"},{"annotations":[72411],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000333"}]},"cv_name":"cellular_component","definition":"Telomerase is a ribonucleoprotein enzyme complex, with a minimal catalytic core composed of a catalytic reverse transcriptase subunit and an RNA subunit that provides the template for telomeric DNA addition. In vivo, the holoenzyme complex often contains additional subunits.","definition_xrefs":["PMID:11884619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"is_a","term_name":"ribonucleoprotein complex","termid":"GO:1990904"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00559":null,"SJAG_00939":null,"SJAG_01327":null,"SJAG_01378":null,"SJAG_01720":null,"SJAG_01819":null,"SJAG_02469":null,"SJAG_03070":null,"SJAG_03460":null,"SJAG_03954":null,"SJAG_04586":null,"SJAG_05240":null,"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"telomerase holoenzyme complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0005697","terms_by_termid":{"GO:0000333":null,"GO:0005697":null}}


id: PBO:0005272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterotrimeric G protein beta subunit Gnr1","termid":"PBO:0005272"}


id: GO:0017195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The acetylation of the N-terminal lysine of proteins to form the derivative N2-acetyl-L-lysine. The occurrence of this modification has not been confirmed.","definition_xrefs":["RESID:AA0048"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal peptidyl-lysine N2-acetylation (obsolete GO:0017195)","termid":"GO:0017195"}


id: GO:0022404
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A multicellular organismal process involved in the periodic casting off and regeneration of an outer covering of cuticle, feathers, hair, horns, skin.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"part_of","term_name":"molting cycle","termid":"GO:0042303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"molting cycle process","termid":"GO:0022404"}


id: PBO:0054160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1527","termid":"PBO:0054160"}


id: MONDO:0020843
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pseudomembranous colitis resulting from infection by Corynebacterium diphtheriae.","definition_xrefs":["NCIT:C34543"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudomembranous conjunctivitis","termid":"MONDO:0001217"},{"relation_name":"is_a","term_name":"diphtheria","termid":"MONDO:0005504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"pseudomembranous diphtheritic conjunctivitis","secondary_identifiers":["ICD9:032.81","SCTID:7773002","UMLS:C0012554","MEDGEN:3856"],"synonyms":[{"name":"Conjunctival diphtheria","type":"related"},{"name":"conjunctival diphtheria","type":"exact"},{"name":"pseudomembranous diphtheritic conjunctivitis","type":"exact"}],"termid":"MONDO:0020843","xrefs":{"Monarch":{"xref_id":"0020843"}}}


id: PATO:0000523
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000523 insecticide sensitivity value (obsolete PATO:0000523)","termid":"PATO:0000523"}


id: MONDO:0100350
data:
  {"annotated_genes":["SJAG_01537","SJAG_01352","SJAG_05289"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87104],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015353"},{"annotations":[87957],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013884"},{"annotations":[87480],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030860"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neuronopathy, distal hereditary motor, autosomal dominant","termid":"MONDO:0015362"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01352":null,"SJAG_01537":null,"SJAG_05289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005244","MONDO:0005559"],"is_obsolete":false,"name":"neuronopathy, distal hereditary motor, type 5","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:318838","MESH:C563443","Orphanet:139536","DOID:0111203","GARD:16955","UMLS:C1833308"],"synonyms":[{"name":"dHMN5","type":"broad"},{"name":"distal HMN V","type":"exact"},{"name":"distal hereditary motor neuropathy type V","type":"exact"},{"name":"distal spinal muscular atrophy type 5","type":"exact"}],"termid":"MONDO:0100350","terms_by_termid":{"MONDO:0013884":null,"MONDO:0015353":null,"MONDO:0030860":null},"xrefs":{"Monarch":{"xref_id":"0100350"}}}


id: GO:0180004
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: RNA polymerase II large subunit CTD heptapeptide repeat--phospho-L-tyrosine (consensus YSPTSPS)(position 1) + H2O = RNA polymerase II large subunit + phosphate.","definition_xrefs":["PMID:22622228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II CTD heptapeptide repeat phosphatase activity","termid":"GO:0008420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016788","GO:0140096","GO:0003674","GO:0004721","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"RNA polymerase II CTD heptapeptide repeat Y1 phosphatase activity","synonyms":[{"name":"RNA polymerase II C-terminal domain Y1 phosphatase activity","type":"exact"}],"termid":"GO:0180004"}


id: GO:0044772
data:
  {"annotated_genes":["SJAG_01044","SJAG_04332","SJAG_01297","SJAG_04699","SJAG_05346","SJAG_01010","SJAG_02771","SJAG_04259","SJAG_03695","SJAG_02563","SJAG_01076","SJAG_00640","SJAG_00318","SJAG_04469","SJAG_03026","SJAG_00214","SJAG_00169","SJAG_02498","SJAG_00117","SJAG_01825","SJAG_03353","SJAG_01084","SJAG_02336","SJAG_02576","SJAG_03927","SJAG_00991","SJAG_01082","SJAG_03067","SJAG_02332","SJAG_03126","SJAG_04655","SJAG_02026","SJAG_04394","SJAG_02404","SJAG_03592","SJAG_04943","SJAG_00666","SJAG_01187","SJAG_00883","SJAG_01605","SJAG_04140","SJAG_02736","SJAG_04126","SJAG_01679","SJAG_03575","SJAG_04671","SJAG_01429","SJAG_02858","SJAG_00600","SJAG_02451","SJAG_03854","SJAG_02592","SJAG_03525","SJAG_01205","SJAG_00071","SJAG_00364","SJAG_02098","SJAG_03602","SJAG_00526","SJAG_01118","SJAG_06592","SJAG_01801","SJAG_01000","SJAG_02342","SJAG_00100","SJAG_03681","SJAG_01873","SJAG_04999","SJAG_02074","SJAG_03591","SJAG_00996","SJAG_02169","SJAG_01311","SJAG_01805","SJAG_03160","SJAG_00216","SJAG_01956","SJAG_02380","SJAG_01146","SJAG_03309","SJAG_03529","SJAG_05373","SJAG_03073","SJAG_01837","SJAG_03699","SJAG_04884","SJAG_01050","SJAG_04464","SJAG_05329","SJAG_01680","SJAG_04486","SJAG_02392","SJAG_02266","SJAG_04287","SJAG_02723","SJAG_03942","SJAG_01330","SJAG_04597","SJAG_01210","SJAG_01855","SJAG_00082","SJAG_04280","SJAG_02810","SJAG_03048","SJAG_01456","SJAG_01901","SJAG_03486","SJAG_00256","SJAG_04573","SJAG_04968","SJAG_01401"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62950],"is_not":false,"summary":null,"term":"GO:0044772"},{"annotations":[105713,113815,116131,110094,109066,101405,92535,115643,117762],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[110200,75860,113889],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000082"},{"annotations":[108225,106130,119879,104179,78998],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000086"},{"annotations":[72601,74781,80125],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007091"},{"annotations":[102357,96221,91811,103261,117865],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0044878"},{"annotations":[118970,72857,117921,119142,76642,113890,101005,80677,101172,111162,102358,118665,95776,74071,108452,93244,81268],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0033314"},{"annotations":[103440,110733,117764,90756,104181],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0031568"},{"annotations":[93121,111518],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0031571"},{"annotations":[100242,117867,96354,97666],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0031569"},{"annotations":[118883,111163,81141,113584,108453,76994,74073,61540,90935,62364,67830,93245,60831,102872,101174],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0007095"},{"annotations":[108150,111754,103618,116361,117420,101247],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0007094"},{"annotations":[80673],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0031578"},{"annotations":[104188],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0001100"},{"annotations":[100691,93558,93972,95140],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:2000134"},{"annotations":[58822,106324,114336,102818,80335,116330,95030,108847,113672,60729,113290,96180,108484,95374],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0010972"},{"annotations":[96010],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[104195,95564,91813,113817],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0031536"},{"annotations":[107804,107642,118937,104196,108490,111031],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1900087"},{"annotations":[95615,89862,100815,96184,103578,93552,109068,105310,93952,75217,113055,110414,118536,72475,112192,96223,89871,118347,100243],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0010971"},{"annotations":[89666,103211],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905287"},{"annotations":[118538],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090267"},{"annotations":[116628,103927,99512,95618,101962,104203,113230],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0045842"},{"annotations":[72912,112869,78318,72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cell cycle process by which a cell commits to entering the next mitotic cell cycle phase.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle phase transition","termid":"GO:0044770"},{"relation_name":"is_a","term_name":"mitotic cell cycle 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cell cycle phase transition","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0044772","terms_by_termid":{"GO:0000082":null,"GO:0000086":null,"GO:0001100":null,"GO:0007089":null,"GO:0007091":null,"GO:0007094":null,"GO:0007095":null,"GO:0007096":null,"GO:0010389":null,"GO:0010971":null,"GO:0010972":null,"GO:0031536":null,"GO:0031568":null,"GO:0031569":null,"GO:0031571":null,"GO:0031578":null,"GO:0033314":null,"GO:0044772":null,"GO:0044878":null,"GO:0045842":null,"GO:0090267":null,"GO:0140499":null,"GO:1900087":null,"GO:1902426":null,"GO:1905287":null,"GO:2000134":null}}


id: PBO:0049803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypocretin receptor 2","termid":"PBO:0049803"}


id: PBO:0056144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannose-6-phosphate receptor, cation dependent","termid":"PBO:0056144"}


id: PBO:0071683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 15","termid":"PBO:0071683"}


id: FYPO:0006899
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cell separation after cytokinesis is abnormally asymmetric, i.e. cells separate asymmetrically by usually detaching one side of the new ends before the other. Normally, separate symmetrically by detaching both sides of the new ends from each other simultaneously.","definition_xrefs":["PomBase:mah","PMID:31116668"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell separation after cytokinesis","termid":"FYPO:0000164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"asymmetric cell separation after cytokinesis","synonyms":[{"name":"asymmetric cell separation after cytokinesis during mitotic cell cycle","type":"related"},{"name":"asymmetric cell separation after cytokinesis during vegetative growth","type":"exact"},{"name":"asymmetric mitotic cytokinetic cell separation","type":"exact"},{"name":"asymmetric septum digestion after cytokinesis","type":"exact"}],"termid":"FYPO:0006899"}


id: GO:1990578
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  {"annotated_genes":["SJAG_01227","SJAG_01785","SJAG_01422","SJAG_00784","SJAG_03281","SJAG_04583","SJAG_01329"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89182,96532,99616,100470,102420,108159,117467],"is_not":false,"summary":null,"term":"GO:1990578"}]},"cv_name":"cellular_component","definition":"The membrane of the perinuclear endoplasmic reticulum, which is the portion of endoplasmic reticulum, the intracellular network of tubules and cisternae, that occurs near the nucleus.","definition_xrefs":["PMID:25454947"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle membrane","termid":"GO:0031090"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"},{"relation_name":"part_of","term_name":"perinuclear endoplasmic reticulum","termid":"GO:0097038"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00784":null,"SJAG_01227":null,"SJAG_01329":null,"SJAG_01422":null,"SJAG_01785":null,"SJAG_03281":null,"SJAG_04583":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005789"}],"interesting_parent_ids":["GO:0005783","GO:0005737","GO:0005789","GO:0005575"],"is_obsolete":false,"name":"perinuclear endoplasmic reticulum membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"perinuclear ER membrane","type":"exact"}],"termid":"GO:1990578","terms_by_termid":{"GO:1990578":null}}


id: GO:0090386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the arrangement of constituent parts of a phagosome within a cell and contributes to apoptotic cell clearance. Phagosome maturation begins with endocytosis and formation of the early phagosome and ends with the formation of the hybrid organelle, the phagolysosome.","definition_xrefs":["GOC:tb","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phagosome maturation","termid":"GO:0090382"},{"relation_name":"part_of","term_name":"apoptotic cell clearance","termid":"GO:0043277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"phagosome maturation involved in apoptotic cell clearance","termid":"GO:0090386"}


id: PBO:0052994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laminin subunit alpha 5","termid":"PBO:0052994"}


id: GO:0003127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events by which an endogenous stimulus is received by a cilium on a cell and converted to a molecular signal contributing to left/right asymmetry.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to endogenous stimulus","termid":"GO:0071495"},{"relation_name":"part_of","term_name":"determination of left/right symmetry","termid":"GO:0007368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of nodal flow","termid":"GO:0003127"}


id: MONDO:0850049
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"painful legs and moving toes syndrome","secondary_identifiers":["GARD:12706","Orphanet:617440","MEDGEN:1842291","UMLS:C5680388"],"termid":"MONDO:0850049","xrefs":{"Monarch":{"xref_id":"0850049"}}}


id: MONDO:0009251
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fructose-1,6-biphosphatase (FBP) deficiency is a disorder of fructose metabolism characterized by recurrent episodes of fasting hypoglycemia with lactic acidosis, that may be life-threatening in neonates and infants.","definition_xrefs":["Orphanet:348"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"disorder of fructose metabolism","termid":"MONDO:0017689"},{"relation_name":"is_a","term_name":"disorder of gluconeogenesis","termid":"MONDO:0019225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"fructose-1,6-bisphosphatase deficiency","secondary_identifiers":["DOID:5204","MEDGEN:42106","GARD:2400","NANDO:2200535","UMLS:C0016756","OMIM:229700","SCTID:28183005","NCIT:C128119"],"synonyms":[{"name":"FBP1D","type":"related"},{"name":"baker-Winegrad disease","type":"related"},{"name":"fructose 1 phosphate aldolase deficiency","type":"exact"},{"name":"fructose 1,6 diphosphatase deficiency","type":"related"},{"name":"fructose-1,6-bisphosphatase deficiency","type":"exact"},{"name":"fructose-1,6-diphosphatase deficiency","type":"exact"}],"termid":"MONDO:0009251","xrefs":{"Monarch":{"xref_id":"0009251"}}}


id: PBO:0017620
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Progressive Myoclonus Epilepsy","termid":"PBO:0017620"}


id: PBO:0040797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic helix-loop-helix family member a15","termid":"PBO:0040797"}


id: GO:0097519
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-DNA complex consisting of a higher-order oligomer of strand exchange proteins (recombinases) on single-stranded DNA.","definition_xrefs":["GOC:cjm","PMID:10357855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA complex","termid":"GO:0032993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"DNA recombinase complex","termid":"GO:0097519"}


id: FYPO:0001380
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the nucleus is normal (i.e. indistinguishable from wild type) in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"},{"relation_name":"is_a","term_name":"normal nuclear morphology","termid":"FYPO:0001673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal nuclear morphology during vegetative growth","synonyms":[{"name":"normal nuclear morphology during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001380"}


id: GO:0010225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a UV-C radiation stimulus. UV-C radiation (UV-C light) spans the wavelengths 100 to 280 nm.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to UV","termid":"GO:0009411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to UV-C","synonyms":[{"name":"response to UV-C light stimulus","type":"exact"},{"name":"response to UV-C radiation stimulus","type":"exact"},{"name":"response to UVC light stimulus","type":"exact"},{"name":"response to UVC radiation stimulus","type":"exact"},{"name":"response to germicidal ultraviolet light stimulus","type":"exact"},{"name":"response to germicidal ultraviolet radiation stimulus","type":"exact"},{"name":"response to shortwave ultraviolet light stimulus","type":"exact"},{"name":"response to shortwave ultraviolet radiation stimulus","type":"exact"}],"termid":"GO:0010225"}


id: SO:0001052
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0001052 nested_repeat (obsolete SO:0001052)","termid":"SO:0001052"}


id: PBO:0088690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-FO ATP synthase subunit","termid":"PBO:0088690"}


id: PBO:0043954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin beta-gamma domain containing 2","termid":"PBO:0043954"}


id: GO:1904325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of inhibitory G protein-coupled receptor phosphorylation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:15937517"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein phosphorylation","termid":"GO:0001934"},{"relation_name":"is_a","term_name":"regulation of inhibitory G protein-coupled receptor phosphorylation","termid":"GO:1904323"},{"relation_name":"positively_regulates","term_name":"inhibitory G protein-coupled receptor phosphorylation","termid":"GO:0002030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of inhibitory G protein-coupled receptor phosphorylation","synonyms":[{"name":"activation of inhibitory G-protein coupled receptor phosphorylation","type":"narrow"},{"name":"positive regulation of inhibitory G-protein coupled receptor phosphorylation","type":"exact"},{"name":"up regulation of inhibitory G-protein coupled receptor phosphorylation","type":"exact"},{"name":"up-regulation of inhibitory G-protein coupled receptor phosphorylation","type":"exact"},{"name":"upregulation of inhibitory G-protein coupled receptor phosphorylation","type":"exact"}],"termid":"GO:1904325"}


id: PBO:0086598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; expression is cell-cycle regulated as shown by microarray analysis; potential regulatory target of Mbp1p, which binds to the YJL181W promoter region; contains a PH-like domain; RBH1 has a paralog, RBH2, that arose from the whole genome duplication","termid":"PBO:0086598"}


id: GO:0034133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of toll-like receptor 1 signaling pathway.","definition_xrefs":["PMID:16551253","PMID:17328678","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of toll-like receptor 1 signaling pathway","termid":"GO:0034131"},{"relation_name":"is_a","term_name":"positive regulation of pattern recognition receptor signaling pathway","termid":"GO:0062208"},{"relation_name":"positively_regulates","term_name":"toll-like receptor 1 signaling pathway","termid":"GO:0034130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of toll-like receptor 1 signaling pathway","synonyms":[{"name":"positive regulation of TLR1 signaling pathway","type":"exact"},{"name":"positive regulation of toll-like receptor 1 signalling pathway","type":"exact"}],"termid":"GO:0034133"}


id: FYPO:0003538
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the first meiotic nuclear division begins earlier than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"premature meiosis","termid":"FYPO:0000479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"premature meiosis I","synonyms":[{"name":"advanced meiosis I","type":"exact"},{"name":"premature first meiotic nuclear division","type":"exact"}],"termid":"FYPO:0003538"}


id: MONDO:0001950
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"corneal disorder","termid":"MONDO:0000942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"corneal ectasia","secondary_identifiers":["ICD9:371.71","SCTID:14748007","icd11.foundation:1703179358","UMLS:C0155135","ICD10CM:H18.71","DOID:1436","MEDGEN:509803"],"termid":"MONDO:0001950","xrefs":{"Monarch":{"xref_id":"0001950"}}}


id: GO:0015677
data:
  {"annotated_genes":["SJAG_04743"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80411],"is_not":false,"summary":null,"term":"GO:0015677"}]},"cv_name":"biological_process","definition":"The directed movement of copper ions into a cell or organelle.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copper ion transport","termid":"GO:0006825"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04743":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"copper ion import","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"copper ion uptake","type":"exact"}],"termid":"GO:0015677","terms_by_termid":{"GO:0015677":null}}


id: GO:0003086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which angiotensinogen metabolites in the kidney modulate the force with which blood passes through the renal circulatory system. The process begins when renin cleaves angiotensinogen.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure by renin-angiotensin","termid":"GO:0003081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by local renal renin-angiotensin","termid":"GO:0003086"}


id: MONDO:0008894
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cataract-hypertrichosis-intellectual disability syndrome is characterized by congenital cataract, generalized hypertrichosis and intellectual deficit. It has been described in two Egyptian sibs born to consanguineous parents. It is transmitted as an autosomal recessive trait.","definition_xrefs":["Orphanet:1375"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"hypertrichosis","termid":"MONDO:0019280"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"cataract-hypertrichosis-intellectual disability syndrome","secondary_identifiers":["GARD:1052","MEDGEN:167117","MESH:C537959","OMIM:211770","SCTID:722379001","UMLS:C0796282"],"synonyms":[{"name":"CAHMR syndrome","type":"exact"},{"name":"cataract, hypertrichosis, intellectual disability syndrome","type":"related"},{"name":"cataract, hypertrichosis, mental retardation syndrome","type":"related"}],"termid":"MONDO:0008894","xrefs":{"Monarch":{"xref_id":"0008894"}}}


id: PBO:0113441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sterol transport protein, functional homolog of human NPC2 Niemann-Pick disease type C2 protein; together with Ncr1p mediates integration of ergosterol into vacuolar membrane; functions as general “lipid solubilizer”, binds variety of amphiphilic lipid ligands; targeted to vacuole via Vps10p-dependent endosomal vacuolar protein sorting pathway; yeast NPC2 can complement mutations in human NPC2","termid":"PBO:0113441"}


id: GO:0030493
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a bacteriochlorophyll, any of the chlorophylls of photosynthetic bacteria. They differ structurally from the chlorophylls of higher plants.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chlorophyll metabolic process","termid":"GO:0015994"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"bacteriochlorophyll metabolic process","synonyms":[{"name":"bacteriochlorophyll metabolism","type":"exact"}],"termid":"GO:0030493"}


id: PBO:0113013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aurora kinase of the chromosomal passenger complex; mediates release of mono-oriented kinetochores from microtubules in MI, and kinetochore release from SPB clusters during meiotic exit; maintains meiotic spindle checkpoint delay in a mek1 null; maintains condensed chromosomes in anaphase; required for SPB cohesion and preventing multipolar spindle formation; promotes telomerase release at G2/M; Iocalizes to nuclear foci that diffuse upon DNA replication stress; inhibits Pse1p upon SAC arrest","termid":"PBO:0113013"}


id: GO:0006272
data:
  {"annotated_genes":["SJAG_02908","SJAG_05239","SJAG_00814","SJAG_04877","SJAG_01010","SJAG_04879","SJAG_02182","SJAG_00729","SJAG_00863","SJAG_04190"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72117,76601],"is_not":false,"summary":null,"term":"GO:0006272"},{"annotations":[97088,91391,108818,106768,95777,106050,97056,109187],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903460"}]},"cv_name":"biological_process","definition":"The process in which an existing DNA strand is extended continuously in a 5' to 3' direction by activities including the addition of nucleotides to the 3' end of the strand, complementary to an existing template, as part of DNA replication. Leading strand elongation proceeds in the same direction as the replication fork.","definition_xrefs":["GOC:mah","ISBN:071673706X","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA strand elongation involved in DNA replication","termid":"GO:0006271"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00729":null,"SJAG_00814":null,"SJAG_00863":null,"SJAG_01010":null,"SJAG_02182":null,"SJAG_02908":null,"SJAG_04190":null,"SJAG_04877":null,"SJAG_04879":null,"SJAG_05239":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006260"],"is_obsolete":false,"name":"leading strand elongation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0006272","terms_by_termid":{"GO:0006272":null,"GO:1903460":null}}


id: GO:0102608
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: tetracenomycin B3 + S-adenosyl-L-methionine = tetracenomycin E + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete tetracenomycin B3 8-O-methyl transferase activity (obsolete GO:0102608)","termid":"GO:0102608"}


id: PBO:0047773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box B2","termid":"PBO:0047773"}


id: FYPO:0003061
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the two nuclei in a zygote formed by conjugation with cellular fusion undergo meiosis before karyogamy with nuclear fusion is completed.","definition_xrefs":["PMID:23755176","PomBase:mah","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiosis","termid":"FYPO:0000051"},{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle entry","termid":"FYPO:0009006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"meiotic cell cycle in zygote with unfused nuclei","synonyms":[{"name":"haploid meiosis before karyogamy","type":"exact"},{"name":"twin haploid meiotic nuclear division","type":"exact"}],"termid":"FYPO:0003061"}


id: MONDO:0005163
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infection affecting monkeys, chimpanzees, and other non human primates caused by a HIV-like virus.","definition_xrefs":["EFO:0001675"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease, non-human animal","termid":"MONDO:0700053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"simian immunodeficiency virus infection","synonyms":[{"name":"Simian immunodeficiency virus caused disease or disorder","type":"exact"},{"name":"Simian immunodeficiency virus disease or disorder","type":"exact"},{"name":"Simian immunodeficiency virus infectious disease","type":"exact"}],"termid":"MONDO:0005163","xrefs":{"Monarch":{"xref_id":"0005163"}}}


id: PBO:0052041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"junction plakoglobin","termid":"PBO:0052041"}


id: PBO:0084208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Homeodomain-containing protein and putative transcription factor; found associated with chromatin; target of SBF transcription factor; induced during meiosis and under cell-damaging conditions; TOS8 has a paralog, CUP9, that arose from the whole genome duplication","termid":"PBO:0084208"}


id: PBO:0000933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein","termid":"PBO:0000933"}


id: GO:0004825
data:
  {"annotated_genes":["SJAG_16456","SJAG_01159"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71126,79891],"is_not":false,"summary":null,"term":"GO:0004825"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-methionine + tRNA(Met) = AMP + diphosphate + L-methionyl-tRNA(Met).","definition_xrefs":["EC:6.1.1.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01159":null,"SJAG_16456":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140101"}],"interesting_parent_ids":["GO:0003824","GO:0140098","GO:0140101","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"methionine-tRNA ligase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-379994","MetaCyc:METHIONINE--TRNA-LIGASE-RXN","Reactome:R-HSA-380157","RHEA:13481"],"synonyms":[{"name":"L-methionine:tRNAMet ligase (AMP-forming)","type":"related"},{"name":"MetRS activity","type":"related"},{"name":"methionine translase activity","type":"related"},{"name":"methionyl-tRNA synthetase activity","type":"exact"},{"name":"methionyl-transfer RNA synthetase activity","type":"related"},{"name":"methionyl-transfer ribonucleate synthetase activity","type":"related"},{"name":"methionyl-transfer ribonucleic acid synthetase activity","type":"related"}],"termid":"GO:0004825","terms_by_termid":{"GO:0004825":null}}


id: GO:0050997
data:
  {"annotated_genes":["SJAG_02734","SJAG_03743","SJAG_03985","SJAG_04842","SJAG_00946","SJAG_02464","SJAG_00706"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71607],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031210"},{"annotations":[57682,62498,59360,65560,74979,58924],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030976"}]},"cv_name":"molecular_function","definition":"Binding to a quaternary ammonium group, including glycine betaine, choline, carnitine and proline. A quaternary ammonium group is any compound that can be regarded as derived from ammonium hydroxide or an ammonium salt by replacement of all four hydrogen atoms of the NH4+ ion by organic groups.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule binding","termid":"GO:0036094"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00706":null,"SJAG_00946":null,"SJAG_02464":null,"SJAG_02734":null,"SJAG_03743":null,"SJAG_03985":null,"SJAG_04842":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"quaternary ammonium group binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"synonyms":[{"name":"quaternary amine binding","type":"exact"}],"termid":"GO:0050997","terms_by_termid":{"GO:0030976":null,"GO:0031210":null}}


id: PBO:0003127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alcohol dehydrogenase (predicted)","termid":"PBO:0003127"}


id: MONDO:0014650
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A temporal lobe epilepsy characterized by autosomal dominant inheritance of complex partial seizures with occasional secondary generalization and that has material basis in heterozygous mutation in the GAL gene on chromosome 11q13.","definition_xrefs":["DOID:0060754","PMID:25691535"],"direct_ancestors":[{"relation_name":"is_a","term_name":"temporal lobe epilepsy","termid":"MONDO:0005115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"familial temporal lobe epilepsy 8","secondary_identifiers":["OMIM:616461","GARD:16116","MEDGEN:909158","UMLS:C4225318"],"synonyms":[{"name":"ETL8","type":"exact"},{"name":"epilepsy, familial temporal lobe, 8","type":"related"},{"name":"epilepsy, familial temporal lobe, type 8","type":"exact"},{"name":"familial temporal lobe epilepsy type 8","type":"exact"}],"termid":"MONDO:0014650","xrefs":{"Monarch":{"xref_id":"0014650"}}}


id: GO:0018035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a C-terminal peptidyl-arginine amide by hydrolysis and oxidation of an interior Arg-Gly peptide in a secreted protein.","definition_xrefs":["RESID:AA0082"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal peptidyl-arginine amidation (obsolete GO:0018035)","termid":"GO:0018035"}


id: PBO:0065614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase 4A2","termid":"PBO:0065614"}


id: GO:1905242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 3,3',5-triiodo-L-thyronine stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:21382270"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to amino acid","termid":"GO:0043200"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to 3,3',5-triiodo-L-thyronine","synonyms":[{"name":"response to Liothyronin","type":"exact"},{"name":"response to Liothyronine","type":"exact"},{"name":"response to Liothyroninum","type":"exact"}],"termid":"GO:1905242"}


id: FYPO:0003961
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of phospholipid:diacylglycerol acyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0000661","FYPO:0000654","FYPO:0001985"],"is_obsolete":false,"name":"abnormal phospholipid:diacylglycerol acyltransferase activity","synonyms":[{"name":"abnormal PDAT activity","type":"exact"}],"termid":"FYPO:0003961"}


id: MONDO:0018113
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Isolated synostotic plagiocephaly (SP) is a form of nonsyndromic craniosynostosis characterized by premature fusion of one coronal suture leading to skull deformity and facial asymmetry.","definition_xrefs":["Orphanet:35098"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete neuro-ophthalmological disease (obsolete MONDO:0015368)","termid":"MONDO:0015368"}],"gene_count":0,"genotype_count":0,"name":"obsolete isolated plagiocephaly (obsolete MONDO:0018113)","synonyms":[{"name":"non-syndromic unicoronal synostosis","type":"exact"},{"name":"synostotic plagiocephaly","type":"exact"}],"termid":"MONDO:0018113","xrefs":{"Monarch":{"xref_id":"0018113"}}}


id: PBO:0083358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the verified gene REV1; null mutant displays increased resistance to antifungal agents gliotoxin, cycloheximide and H2O2","termid":"PBO:0083358"}


id: PBO:0072853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretion associated Ras related GTPase 1A pseudogene 3","termid":"PBO:0072853"}


id: MONDO:0001494
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A disorder characterized by recurrent sexual urges, fantasies, or behaviors in a heterosexual male involving cross-dressing.","definition_xrefs":["NCIT:P378"],"gene_count":0,"genotype_count":0,"name":"obsolete transvestism (obsolete MONDO:0001494)","secondary_identifiers":["DOID:1233","SCTID:472981000","MESH:D014190","ICD9:302.3","NCIT:C94359"],"synonyms":[{"name":"Transvestic fetishism","type":"exact"},{"name":"cross dresser","type":"exact"},{"name":"dual-role transvestism","type":"exact"}],"termid":"MONDO:0001494","xrefs":{"Monarch":{"xref_id":"0001494"}}}


id: PBO:0065495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSMG3 antisense RNA 1 (head to head)","termid":"PBO:0065495"}


id: PBO:0066351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA terminal phosphate cyclase like 1","termid":"PBO:0066351"}


id: GO:0006206
data:
  {"annotated_genes":["SJAG_03164","SJAG_00694","SJAG_00197","SJAG_00444","SJAG_00964","SJAG_01673","SJAG_00392","SJAG_00779","SJAG_05024","SJAG_04354","SJAG_04709","SJAG_02593","SJAG_03708"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76211,89271,91011,116778],"is_not":false,"summary":null,"term":"GO:0006206"},{"annotations":[75800,57867,71475,73343,75063,89600,71715,73645],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006207"},{"annotations":[93789],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006223"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving pyrimidine nucleobases, 1,3-diazine, organic nitrogenous bases.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase metabolic process","termid":"GO:0009112"},{"relation_name":"is_a","term_name":"pyrimidine-containing compound metabolic process","termid":"GO:0072527"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00197":null,"SJAG_00392":null,"SJAG_00444":null,"SJAG_00694":null,"SJAG_00779":null,"SJAG_00964":null,"SJAG_01673":null,"SJAG_02593":null,"SJAG_03164":null,"SJAG_03708":null,"SJAG_04354":null,"SJAG_04709":null,"SJAG_05024":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"pyrimidine nucleobase metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"pyrimidine base metabolic process","type":"exact"},{"name":"pyrimidine base metabolism","type":"exact"},{"name":"pyrimidine metabolic process","type":"related"},{"name":"pyrimidine metabolism","type":"related"}],"termid":"GO:0006206","terms_by_termid":{"GO:0006206":null,"GO:0006207":null,"GO:0006223":null}}


id: GO:0005925
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell-substrate junction that anchors the cell to the extracellular matrix and that forms a point of termination of actin filaments. In insects focal adhesion has also been referred to as hemi-adherens junction (HAJ).","definition_xrefs":["PMID:8314002","GOC:aruk","PMID:1643657","PMID:23033047","ISBN:0124325653","GOC:bc","PMID:26923917","PMID:15246682","PMID:16805308","PMID:19197329","PMID:10419689","ISBN:0815316208","PMID:12191915","PMID:28796323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-substrate junction","termid":"GO:0030055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"focal adhesion","secondary_identifiers":["GO:0005926","GO:0008357","Wikipedia:Focal_adhesion"],"synonyms":[{"name":"HAJ","type":"exact"},{"name":"adhesion plaque","type":"related"},{"name":"connecting hemi-adherens junction","type":"exact"},{"name":"focal contact","type":"exact"},{"name":"hemi-adherens junction","type":"exact"}],"termid":"GO:0005925"}


id: GO:0100020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that regulates transport.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transport by transcription from RNA polymerase II promoter (obsolete GO:0100020)","termid":"GO:0100020"}


id: PBO:0080930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta pseudogene 8","termid":"PBO:0080930"}


id: PBO:0073153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC31 homolog A, COPII coat complex component","termid":"PBO:0073153"}


id: GO:0048478
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that prevents the collapse of stalled replication forks.","definition_xrefs":["GOC:vw","PMID:14560029"],"gene_count":0,"genotype_count":0,"name":"obsolete replication fork protection (obsolete GO:0048478)","synonyms":[{"name":"replication fork maintenance","type":"broad"},{"name":"replication fork stabilization","type":"broad"}],"termid":"GO:0048478"}


id: MONDO:0011645
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete aneurysmal bone cysts (obsolete MONDO:0011645)","termid":"MONDO:0011645","xrefs":{"Monarch":{"xref_id":"0011645"}}}


id: PBO:0077647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF alpha induced protein 6","termid":"PBO:0077647"}


id: GO:0040038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which two small cells are generated, as byproducts destined to degenerate, as a result of the first and second meiotic divisions of a primary oocyte during its development to a mature ovum. One polar body is formed in the first division of meiosis and the other in the second division; at each division, the cytoplasm divides unequally, so that the polar body is of much smaller size than the developing oocyte. At the second division in which a polar body is formed, the polar body and the developing oocyte each contain a haploid set of chromosomes.","definition_xrefs":["ISBN:0198506732","GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic cytokinesis","termid":"GO:0033206"},{"relation_name":"part_of","term_name":"female meiotic nuclear division","termid":"GO:0007143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0140013","GO:0007049"],"is_obsolete":false,"name":"polar body extrusion after meiotic divisions","termid":"GO:0040038"}


id: MONDO:0012668
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tented eyebrows","secondary_identifiers":["OMIM:611426","UMLS:C1969624","MEDGEN:370710"],"synonyms":[{"name":"Tented eyebrows","type":"exact"}],"termid":"MONDO:0012668","xrefs":{"Monarch":{"xref_id":"0012668"}}}


id: PBO:0062994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase C and casein kinase substrate in neurons 3","termid":"PBO:0062994"}


id: PBO:0061573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurotrophin 6 alpha (pseudogene)","termid":"PBO:0061573"}


id: MONDO:1012901
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ichthyosis that occurs in cattle due to a mutation in the FA2H gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"ichthyosis, cattle","termid":"MONDO:1011541"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ichthyosis, FA2H-related, cattle","secondary_identifiers":["OMIA:002450-9913"],"synonyms":[{"name":"ichthyosis congenita, cattle","type":"related"}],"termid":"MONDO:1012901","xrefs":{"Monarch":{"xref_id":"1012901"}}}


id: PATO:0002432
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape that is in the form of a spade.","definition_xrefs":["PATOC:WC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spade-shaped","termid":"PATO:0002432"}


id: GO:0031324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways by which individual cells transform chemical substances.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cellular metabolic process (obsolete GO:0031324)","synonyms":[{"name":"down regulation of cellular metabolic process","type":"exact"},{"name":"down-regulation of cellular metabolic process","type":"exact"},{"name":"downregulation of cellular metabolic process","type":"exact"},{"name":"inhibition of cellular metabolic process","type":"narrow"},{"name":"negative regulation of cellular metabolism","type":"exact"}],"termid":"GO:0031324"}


id: PATO:0001157
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001157 absolute concentration value (obsolete PATO:0001157)","termid":"PATO:0001157"}


id: GO:0001685
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete axonemal dynein intermediate light chain (obsolete GO:0001685)","synonyms":[{"name":"axonemal dynein intermediate light chain","type":"exact"}],"termid":"GO:0001685"}


id: PBO:0110423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNPO3 pseudogene 2","termid":"PBO:0110423"}


id: MONDO:0020652
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"germ cell tumor of the vulva","termid":"MONDO:0020650"},{"relation_name":"is_a","term_name":"immature teratoma","termid":"MONDO:0024746"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immature teratoma of vulva","secondary_identifiers":["ONCOTREE:VIMT"],"termid":"MONDO:0020652","xrefs":{"Monarch":{"xref_id":"0020652"}}}


id: GO:1903919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of actin filament severing.","definition_xrefs":["GO_REF:0000058","PMID:23325791","GOC:als","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of actin filament severing","termid":"GO:1903918"},{"relation_name":"negatively_regulates","term_name":"actin filament severing","termid":"GO:0051014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of actin filament severing","synonyms":[{"name":"down regulation of F-actin severing","type":"exact"},{"name":"down regulation of actin filament severing","type":"exact"},{"name":"down regulation of actin filament severing activity","type":"related"},{"name":"down regulation of barbed-end actin capping/severing activity","type":"related"},{"name":"down-regulation of F-actin severing","type":"exact"},{"name":"down-regulation of actin filament severing","type":"exact"},{"name":"down-regulation of actin filament severing activity","type":"related"},{"name":"down-regulation of barbed-end actin capping/severing activity","type":"related"},{"name":"downregulation of F-actin severing","type":"exact"},{"name":"downregulation of actin filament severing","type":"exact"},{"name":"downregulation of actin filament severing activity","type":"related"},{"name":"downregulation of barbed-end actin capping/severing activity","type":"related"},{"name":"inhibition of F-actin severing","type":"narrow"},{"name":"inhibition of actin filament severing","type":"narrow"},{"name":"inhibition of actin filament severing activity","type":"related"},{"name":"inhibition of barbed-end actin capping/severing activity","type":"related"},{"name":"negative regulation of F-actin severing","type":"exact"},{"name":"negative regulation of actin filament severing activity","type":"related"},{"name":"negative regulation of barbed-end actin capping/severing activity","type":"related"}],"termid":"GO:1903919"}


id: PBO:0071381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L30 pseudogene 4","termid":"PBO:0071381"}


id: GO:0009852
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of auxins, a group of plant hormones that regulate aspects of plant growth.","definition_xrefs":["GOC:lr","ISBN:0198547684","GOC:lm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxin metabolic process","termid":"GO:0009850"},{"relation_name":"is_a","term_name":"hormone catabolic process","termid":"GO:0042447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"auxin catabolic process","synonyms":[{"name":"auxin breakdown","type":"exact"},{"name":"auxin catabolism","type":"exact"},{"name":"auxin degradation","type":"exact"}],"termid":"GO:0009852"}


id: PBO:0064978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 34, pseudogene","termid":"PBO:0064978"}


id: MONDO:0002248
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete myeloproliferative neoplasm (obsolete MONDO:0002248)","termid":"MONDO:0002248","xrefs":{"Monarch":{"xref_id":"0002248"}}}


id: PBO:0074531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA E","termid":"PBO:0074531"}


id: PBO:0088499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX domain protein Ubx4","termid":"PBO:0088499"}


id: MONDO:0054731
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 27","secondary_identifiers":["DOID:0111928","GARD:18405","UMLS:C4693784","OMIM:617965","MEDGEN:1634748"],"synonyms":[{"name":"SPGF27","type":"related"},{"name":"spermatogenic failure 27","type":"exact"}],"termid":"MONDO:0054731","xrefs":{"Monarch":{"xref_id":"0054731"}}}


id: PBO:0048666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gastrokine 1","termid":"PBO:0048666"}


id: PBO:0090657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit alpha 6 Pre5","termid":"PBO:0090657"}


id: GO:0072153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a renal fibroblast.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"kidney interstitial fibroblast differentiation","termid":"GO:0072071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal interstitial fibroblast fate commitment","synonyms":[{"name":"kidney interstitial cell fate commitment","type":"exact"}],"termid":"GO:0072153"}


id: GO:0048729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a tissue are generated and organized.","definition_xrefs":["GOC:jid","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"tissue development","termid":"GO:0009888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tissue morphogenesis","termid":"GO:0048729"}


id: PBO:0001042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RING-box protein 1","termid":"PBO:0001042"}


id: MONDO:0008541
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An emergency condition caused by the twisting of the spermatic cord which contains the vessels that provide the blood supply to the testis and surrounding structures. It manifests with acute testicular pain. If immediate medical assistance is not provided, it will lead to necrosis and loss of the testicular tissue.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"testicular disorder","termid":"MONDO:0002329"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatic cord torsion","secondary_identifiers":["ICD9:608.20","MESH:D013086","DOID:11996","ICD9:608.2","MEDGEN:52446","ICD10CM:N44.0","NCIT:C26885","OMIM:187400","SCTID:81996005","UMLS:C0037856"],"synonyms":[{"name":"testicular torsion","type":"exact"},{"name":"torsion of testicle","type":"exact"},{"name":"torsion of testicular cord","type":"related"},{"name":"torsion of testis","type":"exact"}],"termid":"MONDO:0008541","xrefs":{"Monarch":{"xref_id":"0008541"}}}


id: GO:0002149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of hypochlorous acid.","definition_xrefs":["PMID:10085024","GOC:add","PMID:176150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypochlorous acid metabolic process","termid":"GO:0002148"},{"relation_name":"is_a","term_name":"small molecule biosynthetic process","termid":"GO:0044283"},{"relation_name":"is_a","term_name":"reactive oxygen species biosynthetic process","termid":"GO:1903409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"hypochlorous acid biosynthetic process","synonyms":[{"name":"HClO biosynthetic process","type":"exact"},{"name":"HOCl biosynthetic process","type":"exact"},{"name":"hypochlorite biosynthetic process","type":"related"},{"name":"hypochlorous acid biosynthesis","type":"exact"}],"termid":"GO:0002149"}


id: GO:0033488
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cholesterol, cholest-5-en-3 beta-ol, via the intermediate 24,25-dihydrolanosterol.","definition_xrefs":["MetaCyc:PWY66-3","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cholesterol biosynthetic process","termid":"GO:0006695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"cholesterol biosynthetic process via 24,25-dihydrolanosterol","synonyms":[{"name":"cholesterol anabolism via 24,25-dihydrolanosterol","type":"exact"},{"name":"cholesterol biosynthesis via 24,25-dihydrolanosterol","type":"exact"},{"name":"cholesterol formation via 24,25-dihydrolanosterol","type":"exact"},{"name":"cholesterol synthesis via 24,25-dihydrolanosterol","type":"exact"}],"termid":"GO:0033488"}


id: PBO:0055616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3055","termid":"PBO:0055616"}


id: GO:1905471
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone H3-K79 dimethylation.","definition_xrefs":["GOC:TermGenie","PMID:27541139","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H3-K79 dimethylation (obsolete GO:1905471)","synonyms":[{"name":"regulation of histone H3 K79 dimethylation","type":"exact"},{"name":"regulation of histone lysine H3 K79 dimethylation","type":"exact"}],"termid":"GO:1905471"}


id: PBO:0005043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1751 family protein","termid":"PBO:0005043"}


id: GO:0035885
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal 1,4-beta-linkages of N-acetyl-D-glucosamine (GlcNAc) polymers of chitin and chitodextrins. Typically, exochitinases progressively cleave off two subunits from the reducing or non-reducing ends of the chitin chain.","definition_xrefs":["GOC:pde","PMID:21390509","PMID:16298970","GOC:bf","GOC:kah","PMID:11468293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chitinase activity","termid":"GO:0004568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016798"],"is_obsolete":false,"name":"exochitinase activity","secondary_identifiers":["MetaCyc:RXN-12309","RHEA:50672"],"termid":"GO:0035885"}


id: PBO:0057866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3177","termid":"PBO:0057866"}


id: MONDO:1010453
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Conotruncal heart malformations that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conotruncal heart malformations, non-human animal","termid":"MONDO:1010012"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conotruncal heart malformations, dog","secondary_identifiers":["OMIA:000224-9615"],"termid":"MONDO:1010453","xrefs":{"Monarch":{"xref_id":"1010453"}}}


id: MONDO:0013439
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital bile acid synthesis defect type 3 (BAS defect type 3) is a severe anomaly of bile acid synthesis characterized by severe neonatal cholestatic liver disease.","definition_xrefs":["Orphanet:79302"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital bile acid synthesis defect","termid":"MONDO:0018841"},{"relation_name":"is_a","term_name":"CYP7B1-related disorder of oxysterol accumulation","termid":"MONDO:1060107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"congenital bile acid synthesis defect 3","secondary_identifiers":["OMIM:613812","MESH:C566340","UMLS:C3151147","DOID:0111070","GARD:16713","SCTID:719454003","MEDGEN:462497"],"synonyms":[{"name":"BASD3","type":"exact"},{"name":"CBAS3","type":"exact"},{"name":"CYP7B1 congenital bile acid synthesis defect","type":"exact"},{"name":"bile acid synthesis defect, congenital, 3","type":"related"},{"name":"bile acid synthesis defect, congenital, type 3","type":"exact"},{"name":"congenital bile acid synthesis defect caused by mutation in CYP7B1","type":"exact"},{"name":"congenital bile acid synthesis defect type 3","type":"exact"},{"name":"oxysterol 7-alpha-hydroxylase deficiency","type":"exact"}],"termid":"MONDO:0013439","xrefs":{"Monarch":{"xref_id":"0013439"}}}


id: PBO:0063007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAFAH1B2 pseudogene 1","termid":"PBO:0063007"}


id: GO:0000439
data:
  {"annotated_genes":["SJAG_01207","SJAG_04368","SJAG_00512","SJAG_00901","SJAG_03206","SJAG_00758","SJAG_00995"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[57488,63171,71877,77904,80462,92069,93984],"is_not":false,"summary":null,"term":"GO:0000439"}]},"cv_name":"cellular_component","definition":"The 7 subunit core of TFIIH that is a part of either the general transcription factor holo-TFIIH or the nucleotide-excision repair factor 3 complex. In S. cerevisiae/humans the complex is composed of: Ssl2/XPB, Tfb1/p62, Tfb2/p52, Ssl1/p44, Tfb4/p34, Tfb5/p8 and Rad3/XPD.","definition_xrefs":["PMID:22308316","GOC:ew","GOC:krc","PMID:22572993","PMID:23028141","PMID:14500720","PMID:7813015","PMID:17215295"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00512":null,"SJAG_00758":null,"SJAG_00901":null,"SJAG_00995":null,"SJAG_01207":null,"SJAG_03206":null,"SJAG_04368":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"transcription factor TFIIH core complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0000441"],"synonyms":[{"name":"SSL2-core TFIIH complex","type":"exact"},{"name":"core TFIIH complex","type":"exact"}],"termid":"GO:0000439","terms_by_termid":{"GO:0000439":null}}


id: GO:0097257
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: leukotriene B4 + NADP+ = 12-oxo-leukotriene B4 + NADPH + H+.","definition_xrefs":["KEGG_REACTION:R03864","PMID:9461497","GOC:mw","PMID:8394361"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"leukotriene B4 12-hydroxy dehydrogenase activity","secondary_identifiers":["Reactome:R-HSA-2161567","RHEA:50608"],"synonyms":[{"name":"leukotriene B4 12-hydroxydehydrogenase activity","type":"exact"}],"termid":"GO:0097257"}


id: MONDO:0003617
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic inflammation of the fallopian tube. It usually follows an acute inflammatory attack.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salpingitis","termid":"MONDO:0003619"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic salpingitis","secondary_identifiers":["MEDGEN:82839","NCIT:C40118","UMLS:C0269041","SCTID:55551005","DOID:5731","ICD10CM:N70.11","icd11.foundation:1932766800"],"synonyms":[{"name":"salpingitis, chronic","type":"exact"}],"termid":"MONDO:0003617","xrefs":{"Monarch":{"xref_id":"0003617"}}}


id: GO:0103035
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3 H+ + methyl-1,4-benzoquinone + NADPH = methyl-1,4-benzoquinol + NADP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete NADPH:methyl-1,4-benzoquinone oxidoreductase activity (obsolete GO:0103035)","termid":"GO:0103035"}


id: PBO:0072222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S19 pseudogene 5","termid":"PBO:0072222"}


id: PBO:0087272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ser/Thr protein kinase involved in salt tolerance, nutrient response; functions in regulation of Trk1p-Trk2p potassium transporter; overexpression affects the Fe-S and lipoamide containing proteins in the mitochondrion; required for lipoylation of Lat1p, Kgd2p and Gcv3p; partially redundant with Hal5p; has similarity to Npr1p; localizes to the cytoplasm and mitochondrion","termid":"PBO:0087272"}


id: GO:0030324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the esophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax.","definition_xrefs":["GOC:jid","UBERON:0002048"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"},{"relation_name":"part_of","term_name":"respiratory tube development","termid":"GO:0030323"},{"relation_name":"part_of","term_name":"respiratory system development","termid":"GO:0060541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung development","termid":"GO:0030324"}


id: PR:O74806
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peptidyl-tRNA hydrolase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03512","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidyl-tRNA hydrolase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2D10.15c","secondary_identifiers":["UniProtKB:O74806"],"synonyms":[{"name":"PTH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PTRH1","type":"exact"}],"termid":"PR:O74806"}


id: GO:0018068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of protein tyrosine to L-2',4',5'-topaquinone, characteristic of the active site of copper amine oxidases.","definition_xrefs":["RESID:AA0147"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-L-2',4',5'-topaquinone biosynthetic process from peptidyl-tyrosine (obsolete GO:0018068)","synonyms":[{"name":"peptidyl-L-2',4',5'-topaquinone anabolism from peptidyl-tyrosine","type":"exact"},{"name":"peptidyl-L-2',4',5'-topaquinone formation from peptidyl-tyrosine","type":"exact"},{"name":"peptidyl-L-2',4',5'-topaquinone synthesis from peptidyl-tyrosine","type":"exact"}],"termid":"GO:0018068"}


id: PBO:0039125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apoptosis inducing factor mitochondria associated 2","termid":"PBO:0039125"}


id: GO:0047832
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5D-5-O-methyl-chiro-inositol + NADP+ = 2D-5-O-methyl-2,3,5/4,6-pentahydroxycyclohexanone + H+ + NADPH.","definition_xrefs":["EC:1.1.1.142","RHEA:20437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"D-pinitol dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R03498","MetaCyc:D-PINITOL-DEHYDROGENASE-RXN"],"synonyms":[{"name":"1D-3-O-methyl-chiro-inositol:NADP+ oxidoreductase activity","type":"related"},{"name":"5D-5-O-methyl-chiro-inositol:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0047832"}


id: PBO:0039734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APOC4-APOC2 readthrough (NMD candidate)","termid":"PBO:0039734"}


id: MONDO:0012384
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial panic disorder","termid":"MONDO:0031240"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"panic disorder 3","secondary_identifiers":["UMLS:C1864946","MEDGEN:400645","OMIM:609985"],"synonyms":[{"name":"Pand3","type":"related"},{"name":"panic disorder 3","type":"exact"},{"name":"panic disorder susceptibility locus, chromosome 4Q-related","type":"related"},{"name":"panic disorder type 3","type":"exact"}],"termid":"MONDO:0012384","xrefs":{"Monarch":{"xref_id":"0012384"}}}


id: PBO:0002502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein Pof11","termid":"PBO:0002502"}


id: PBO:0041607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase activity and apoptosis inhibitor 1","termid":"PBO:0041607"}


id: PBO:0001066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII-coated vesicle component Erv25 (predicted)","termid":"PBO:0001066"}


id: MONDO:0003467
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A synovial sarcoma arising from the mediastinum.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mediastinum sarcoma","termid":"MONDO:0002852"},{"relation_name":"is_a","term_name":"synovial sarcoma","termid":"MONDO:0010434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"mediastinum synovial sarcoma","secondary_identifiers":["MEDGEN:233174","UMLS:C1334681","NCIT:C6618","DOID:5488"],"synonyms":[{"name":"mediastinal synovial sarcoma","type":"exact"},{"name":"mediastinum synovial sarcoma (disease)","type":"exact"},{"name":"synovial sarcoma of mediastinum","type":"exact"},{"name":"synovial sarcoma of the mediastinum","type":"exact"}],"termid":"MONDO:0003467","xrefs":{"Monarch":{"xref_id":"0003467"}}}


id: GO:0050052
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + leukotriene E(4) + NADPH + O2 = 20-hydroxy-leukotriene E(4) + H2O + NADP+.","definition_xrefs":["RHEA:24120","EC:1.14.13.34"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"leukotriene-E4 20-monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R04256","MetaCyc:LEUKOTRIENE-E4-20-MONOOXYGENASE-RXN"],"synonyms":[{"name":"(7E,9E,11Z,14Z)-(5S,6R)-6-(cystein-S-yl)-5-hydroxyicosa-7,9,11,14-tetraenoate,NADPH:oxygen oxidoreductase (20-hydroxylating)","type":"related"},{"name":"leukotriene-E(4) omega-hydroxylase activity","type":"related"},{"name":"leukotriene-E4 omega-hydroxylase activity","type":"related"},{"name":"leukotriene-E4 w-hydroxylase activity","type":"exact"}],"termid":"GO:0050052"}


id: MONDO:0016619
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare autosomal recessive disorder characterized by developmental abnormalities of the skin, sweat glands, hair and nails. Patients have a reduced ability to sweat. Other signs and symptoms include hypotrichosis and teeth malformations.","definition_xrefs":["NCIT:C84580"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"hypohidrotic ectodermal dysplasia","termid":"MONDO:0016535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive hypohidrotic ectodermal dysplasia","secondary_identifiers":["icd11.foundation:7083042","UMLS:C0406702","GARD:2057","MEDGEN:96067","MESH:D053360","Orphanet:248","SCTID:27025001"],"synonyms":[{"name":"AR-HED","type":"exact"},{"name":"anhidrotic ectodermal dysplasia, autosomal recessive","type":"related"},{"name":"autosomal recessive anhidrotic ectodermal dysplasia","type":"exact"},{"name":"hypohidrotic ectodermal dysplasia autosomal recessive","type":"related"},{"name":"hypohidrotic ectodermal dysplasia, autosomal recessive","type":"exact"}],"termid":"MONDO:0016619","xrefs":{"Monarch":{"xref_id":"0016619"}}}


id: PR:O13759
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- csx1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13759"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding post-transcriptional regulator csx1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A2.09c","synonyms":[{"name":"Spom972h-csx1","type":"exact"}],"termid":"PR:O13759"}


id: PBO:0079137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translin associated factor X interacting protein 1","termid":"PBO:0079137"}


id: GO:1900560
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of austinol.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"austinol metabolic process","termid":"GO:1900558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"austinol biosynthetic process","synonyms":[{"name":"austinol anabolism","type":"exact"},{"name":"austinol biosynthesis","type":"exact"},{"name":"austinol formation","type":"exact"},{"name":"austinol synthesis","type":"exact"}],"termid":"GO:1900560"}


id: GO:0071343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the process in which a contractile ring is assembled in a specific location.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of establishment of actomyosin contractile ring localization (obsolete GO:0071343)","synonyms":[{"name":"negative regulation of establishment of actomyosin contractile ring localization","type":"exact"},{"name":"negative regulation of establishment of contractile ring localisation involved in cell cycle cytokinesis","type":"exact"},{"name":"negative regulation of establishment of contractile ring localization involved in cell cycle cytokinesis","type":"exact"},{"name":"negative regulation of establishment of contractile ring localization involved in cytokinesis during cell cycle","type":"related"}],"termid":"GO:0071343"}


id: FYPO:0003531
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which peroxisome size is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal peroxisome size","synonyms":[{"name":"normal peroxisome size during mitotic cell cycle","type":"related"},{"name":"normal peroxisome size during vegetative growth","type":"exact"}],"termid":"FYPO:0003531"}


id: PBO:0065761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridine nucleotide-disulphide oxidoreductase domain 1","termid":"PBO:0065761"}


id: PBO:0059514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded minor H-strand promoter","termid":"PBO:0059514"}


id: PBO:0029162
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_phosphorylation_during_nitrogen_starvation","termid":"PBO:0029162"}


id: GO:0009221
data:
  {"annotated_genes":["SJAG_03771","SJAG_04627","SJAG_04665","SJAG_04487","SJAG_00885","SJAG_04657","SJAG_02874"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97305,109091,94251],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006240"},{"annotations":[72779],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006233"},{"annotations":[71649,81214],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006231"},{"annotations":[72780,94252,70216],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006235"},{"annotations":[72778],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006227"},{"annotations":[71648,81237],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006226"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a pyrimidine deoxyribonucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a deoxyribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleotide biosynthetic process","termid":"GO:0006221"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide metabolic process","termid":"GO:0009219"},{"relation_name":"is_a","term_name":"2'-deoxyribonucleotide biosynthetic process","termid":"GO:0009265"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_02874":null,"SJAG_03771":null,"SJAG_04487":null,"SJAG_04627":null,"SJAG_04657":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"pyrimidine deoxyribonucleotide biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PWY0-166"],"synonyms":[{"name":"pyrimidine deoxyribonucleotide anabolism","type":"exact"},{"name":"pyrimidine deoxyribonucleotide biosynthesis","type":"exact"},{"name":"pyrimidine deoxyribonucleotide formation","type":"exact"},{"name":"pyrimidine deoxyribonucleotide synthesis","type":"exact"}],"termid":"GO:0009221","terms_by_termid":{"GO:0006226":null,"GO:0006227":null,"GO:0006231":null,"GO:0006233":null,"GO:0006235":null,"GO:0006240":null}}


id: PBO:0088355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Utp21","termid":"PBO:0088355"}


id: SO:0000435
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polypurine tract within an LTR_retrotransposon.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conserved_region","termid":"SO:0000330"},{"relation_name":"part_of","term_name":"LTR_retrotransposon","termid":"SO:0000186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RR_tract","synonyms":[{"name":"LTR retrotransposon poly purine tract","type":"related"},{"name":"RR tract","type":"exact"}],"termid":"SO:0000435"}


id: MONDO:0016257
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete adenosarcoma of the corpus uteri (obsolete MONDO:0016257)","termid":"MONDO:0016257","xrefs":{"Monarch":{"xref_id":"0016257"}}}


id: PBO:0081366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 204, pseudogene","termid":"PBO:0081366"}


id: PR:Q9HDX8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An L-gulonolactone oxidase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-arabinono-1,4-lactone oxidase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1A10.12c","secondary_identifiers":["UniProtKB:Q9HDX8"],"synonyms":[{"name":"ALO (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"L-galactono-gamma-lactone oxidase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAPB1A10.12c","type":"related"},{"name":"Spom972h-Gulo","type":"exact"}],"termid":"PR:Q9HDX8"}


id: PBO:0062664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 13 subfamily F member 1","termid":"PBO:0062664"}


id: FYPO:0005891
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a nuclease activity is decreased when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased nuclease activity","termid":"FYPO:0004253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000654","FYPO:0000707","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"decreased nuclease activity during nitrogen starvation","synonyms":[{"name":"decreased nuclease activity during nitrogen depletion","type":"exact"},{"name":"decreased nuclease activity during nitrogen deprivation","type":"exact"},{"name":"reduced nuclease activity during nitrogen starvation","type":"exact"}],"termid":"FYPO:0005891"}


id: PBO:0041815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capping protein regulator and myosin 1 linker 1","termid":"PBO:0041815"}


id: MONDO:0014095
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial isolated dilated cardiomyopathy in which the cause of the disease is a mutation in the LAMA4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated dilated cardiomyopathy","termid":"MONDO:0700335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dilated cardiomyopathy 1JJ","secondary_identifiers":["DOID:0110438","MEDGEN:815265","OMIM:615235","GARD:15924","UMLS:C3808935"],"synonyms":[{"name":"CMD1JJ","type":"exact"},{"name":"LAMA4 familial isolated dilated cardiomyopathy","type":"exact"},{"name":"cardiomyopathy, dilated, 1JJ","type":"related"},{"name":"cardiomyopathy, dilated, type 1Jj","type":"exact"},{"name":"dilated cardiomyopathy type 1JJ","type":"exact"},{"name":"familial isolated dilated cardiomyopathy caused by mutation in LAMA4","type":"exact"}],"termid":"MONDO:0014095","xrefs":{"Monarch":{"xref_id":"0014095"}}}


id: RO:0002336
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of positively regulates","direct_ancestors":[{"relation_name":"is_a","term_name":"regulated_by","termid":"RO:0002334"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"positively_regulated_by","termid":"RO:0002336"}


id: GO:0005451
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: monoatomic cation(out) + H+(in) = monoatomic cation(in) + H+(out).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete monoatomic cation:proton antiporter activity (obsolete GO:0005451)","synonyms":[{"name":"monovalent cation:hydrogen antiporter activity","type":"exact"},{"name":"monovalent cation:proton antiporter activity","type":"related"}],"termid":"GO:0005451"}


id: GO:0033877
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-2-benzylsuccinate + succinyl-CoA = (R)-2-benzylsuccinyl-CoA + succinate.","definition_xrefs":["RHEA:16469","EC:2.8.3.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-transferase activity","termid":"GO:0008410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016782","GO:0003674"],"is_obsolete":false,"name":"succinyl-CoA:(R)-benzylsuccinate CoA-transferase activity","secondary_identifiers":["GO:0018728","MetaCyc:RXN-864","KEGG_REACTION:R05588","UM-BBD_reactionID:r0329"],"synonyms":[{"name":"benzylsuccinate CoA-transferase activity","type":"related"},{"name":"succinyl-CoA:(R)-2-benzylsuccinate CoA-transferase activity","type":"related"},{"name":"succinyl-CoA:benzylsuccinate CoA-transferase activity","type":"exact"}],"termid":"GO:0033877"}


id: PBO:0083633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eIF3a subunit of the eukaryotic translation initiation factor 3 (eIF3); subunit of the core complex of eIF3; part of a Prt1p-Rpg1p-Nip1p subcomplex that stimulates binding of mRNA and tRNA(i)Met to ribosomes; essential for loading mRNA onto ribosome at entry and exit channels of preinitiation complex; involved in translation reinitiation; eIF3 is also involved in programmed stop codon readthrough","termid":"PBO:0083633"}


id: PBO:0048556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GDNF family receptor alpha 1","termid":"PBO:0048556"}


id: SO:0001643
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A telomerase RNA gene is a non coding RNA gene the RNA product of which is a component of telomerase.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA_gene","termid":"SO:0001263"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomerase_RNA_gene","secondary_identifiers":["http:http\\://en.wikipedia.org/wiki/Telomerase_RNA_component"],"synonyms":[{"name":"TERC","type":"exact"},{"name":"Telomerase RNA component","type":"exact"},{"name":"telomerase RNA gene","type":"exact"}],"termid":"SO:0001643"}


id: MONDO:0019226
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited metabolic disease that is has its basis in the disruption of glucose transport.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of carbohydrate transmembrane transport and absorption","termid":"MONDO:0017706"},{"relation_name":"is_a","term_name":"carbohydrate transport disease","termid":"MONDO:0045015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"glucose transport disorder","secondary_identifiers":["Orphanet:79178","GARD:18957","MEDGEN:1842427","UMLS:C5389835"],"synonyms":[{"name":"inborn error of glucose transport","type":"exact"},{"name":"rare inborn error of glucose transport","type":"related"}],"termid":"MONDO:0019226","xrefs":{"Monarch":{"xref_id":"0019226"}}}


id: MONDO:0021953
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Scarring of the lung parenchyma caused by pulmonary tuberculosis.","definition_xrefs":["NCIT:C35088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary fibrosis","termid":"MONDO:0002771"},{"relation_name":"is_a","term_name":"pulmonary tuberculosis","termid":"MONDO:0006052"},{"relation_name":"is_a","term_name":"respiratory tract infectious disorder","termid":"MONDO:0024355"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tuberculous fibrosis of lung","secondary_identifiers":["ICD9:011.41","ICD9:011.40","ICD9:011.42","ICD9:011.46","MEDGEN:21729","SCTID:90117007","ICD9:011.43","ICD9:011.44","UMLS:C0041336"],"synonyms":[{"name":"Tuberculous Fibrosis of Lung","type":"related"},{"name":"Tuberculous fibrosis of lung","type":"related"},{"name":"tuberculous fibrosis of lung","type":"exact"}],"termid":"MONDO:0021953","xrefs":{"Monarch":{"xref_id":"0021953"}}}


id: GO:2000379
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of reactive oxygen species metabolic process.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of metabolic process","termid":"GO:0009893"},{"relation_name":"is_a","term_name":"regulation of reactive oxygen species metabolic process","termid":"GO:2000377"},{"relation_name":"positively_regulates","term_name":"reactive oxygen species metabolic process","termid":"GO:0072593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of reactive oxygen species metabolic process","synonyms":[{"name":"positive regulation of ROS metabolic process","type":"exact"},{"name":"positive regulation of reactive oxygen species metabolism","type":"exact"}],"termid":"GO:2000379"}


id: GO:0099060
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the postsynaptic specialization membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of postsynaptic specialization membrane (obsolete GO:0099060)","termid":"GO:0099060"}


id: GO:0005463
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a N-acetylgalactosamine from one side of a membrane to the other. N-acetylgalactosamine is a substance composed of N-acetylgalactosamine, a common structural unit of oligosaccharides, in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:ai","ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleotide-sugar transmembrane transporter activity","termid":"GO:0015165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"UDP-N-acetylgalactosamine transmembrane transporter activity","termid":"GO:0005463"}


id: PBO:0058676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6804","termid":"PBO:0058676"}


id: FYPO:0003319
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell adhesion phenotype observed in the vegetative growth phase of the life cycle in which mannose-specific flocculation is increased. Mannose-specific flocculation is the non-sexual aggregation of cells, mediated via the binding of cell wall proteins on one cell to mannose residues on the other, and when it is increased cells adhere to each other more strongly or to a greater extent than normal.","definition_xrefs":["PomBase:mah","GO:0036350"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cell-cell adhesion","termid":"FYPO:0005760"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"increased mannose-specific flocculation","synonyms":[{"name":"increased cell-cell adhesion involved in mannose-specific flocculation","type":"exact"},{"name":"increased mannose-specific flocculation during mitotic cell cycle","type":"related"},{"name":"increased mannose-specific flocculation during vegetative growth","type":"exact"}],"termid":"FYPO:0003319"}


id: FYPO:0005700
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the equatorial microtubule organizing center (eMTOC) does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000934"},{"relation_name":"is_a","term_name":"abolished protein localization to cell division site","termid":"FYPO:0001880"},{"relation_name":"is_a","term_name":"abnormal protein localization to microtubule organizing center","termid":"FYPO:0005702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein localization to eMTOC","synonyms":[{"name":"abolished protein localisation to eMTOC","type":"exact"},{"name":"abolished protein localization to eMTOC during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to eMTOC during vegetative growth","type":"exact"},{"name":"abolished protein localization to equatorial microtubule organizing center","type":"exact"},{"name":"protein absent from eMTOC","type":"related"},{"name":"protein localization to eMTOC abolished","type":"exact"}],"termid":"FYPO:0005700"}


id: GO:0140887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the controlled breakdown of nucleosomes, the beadlike structural units of eukaryotic chromatin composed of histones and DNA.","definition_xrefs":["PMID:35308047","PMID:34471130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"positive regulation of chromatin organization","termid":"GO:1905269"},{"relation_name":"positively_regulates","term_name":"nucleosome assembly","termid":"GO:0006334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006325"},{"rel_name":"regulates","termid":"GO:0006325"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0006325","GO:0065003"],"is_obsolete":false,"name":"positive regulation of nucleosome disassembly","termid":"GO:0140887"}


id: PBO:0005477
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae MMS2","termid":"PBO:0005477"}


id: MONDO:0016751
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A very rare malignant tumor with morphologic features similar to those of benign perineurioma of soft tissue along with hypercellularity, nuclear atypia, hyperchromasia, and a high mitotic rate.","definition_xrefs":["NCIT:C66845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"perineurioma","termid":"MONDO:0019404"},{"relation_name":"is_a","term_name":"peripheral nervous system cancer","termid":"MONDO:0021089"},{"relation_name":"is_a","term_name":"malignant glioma","termid":"MONDO:0100342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant perineurioma","secondary_identifiers":["ICDO:9571/3","MEDGEN:220432","icd11.foundation:986576766","Orphanet:252128","GARD:20741","SCTID:761958009","UMLS:C1266188"],"synonyms":[{"name":"malignant peripheral nerve sheath tumor with perineurial differentiation","type":"exact"},{"name":"malignant peripheral nerve sheath tumour with perineurial differentiation","type":"exact"},{"name":"perineurial malignant peripheral nerve sheath tumor","type":"exact"},{"name":"perineurial malignant peripheral nerve sheath tumour","type":"exact"},{"name":"perineurioma, malignant","type":"exact"}],"termid":"MONDO:0016751","xrefs":{"Monarch":{"xref_id":"0016751"}}}


id: GO:0031761
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a fMet-Leu-Phe receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"fMet-Leu-Phe receptor binding","synonyms":[{"name":"N-formyl peptide receptor binding","type":"exact"},{"name":"fMet-Leu-Phe receptor ligand","type":"narrow"}],"termid":"GO:0031761"}


id: PBO:0057245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 449b","termid":"PBO:0057245"}


id: PBO:0025508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein Coa6 (predicted)","termid":"PBO:0025508"}


id: MONDO:1011611
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Von Willebrand disease that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Von Willebrand disease, non-human animal","termid":"MONDO:1011411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Von Willebrand disease, cattle","secondary_identifiers":["OMIA:001056-9913"],"termid":"MONDO:1011611","xrefs":{"Monarch":{"xref_id":"1011611"}}}


id: MOD:01739
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the O4'-hydrogen atom of a tyrosine residue with the Proteome Sciences TMT6plex-128 reporter+balance group.","definition_xrefs":["Unimod:737#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent O-acylated residue","termid":"MOD:01719"},{"relation_name":"is_a","term_name":"TMT6plex-128 reporter+balance reagent acylated residue","termid":"MOD:01736"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex-128 reporter+balance reagent O4'-acylated tyrosine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01739"}


id: PBO:0015679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase Ecm14 (predicted)","termid":"PBO:0015679"}


id: GO:1903762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization.","definition_xrefs":["GOC:rl","GOC:TermGenie","PMID:18337493","GOC:BHF","GO_REF:0000059","GOC:mtg_cardiac_conduct_nov11"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization (obsolete GO:1903762)","synonyms":[{"name":"activation of voltage gated potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"activation of voltage-dependent potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"activation of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization","type":"narrow"},{"name":"activation of voltage-gated potassium ion channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"activation of voltage-sensitive potassium channel involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"positive regulation of voltage gated potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"positive regulation of voltage-dependent potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"positive regulation of voltage-gated potassium ion channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"positive regulation of voltage-sensitive potassium channel involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"up regulation of voltage gated potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"up regulation of voltage-dependent potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"up regulation of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization","type":"exact"},{"name":"up regulation of voltage-gated potassium ion channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"up regulation of voltage-sensitive potassium channel involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"up-regulation of voltage gated potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"up-regulation of voltage-dependent potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"up-regulation of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization","type":"exact"},{"name":"up-regulation of voltage-gated potassium ion channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"up-regulation of voltage-sensitive potassium channel involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"upregulation of voltage gated potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"upregulation of voltage-dependent potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"upregulation of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization","type":"exact"},{"name":"upregulation of voltage-gated potassium ion channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"upregulation of voltage-sensitive potassium channel involved in ventricular cardiac muscle cell action potential","type":"exact"}],"termid":"GO:1903762"}


id: PBO:0049862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatocellular carcinoma up-regulated EZH2-associated long non-coding RNA","termid":"PBO:0049862"}


id: PBO:0001724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Cki3","termid":"PBO:0001724"}


id: PBO:0085843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern; non-essential gene; upregulated by and required for tolerance to 4-Methylcyclohexane methanol; induced by treatment with 8-methoxypsoralen and UVA irradiation; contains 10-11 predicted transmembrane domains","termid":"PBO:0085843"}


id: PBO:0034063
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-kills","termid":"PBO:0034063"}


id: SO:0000458
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Germline genomic DNA including D-region with 5' UTR and 3' UTR, also designated as D-segment.","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_segment","termid":"SO:0000460"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D_gene_segment","synonyms":[{"name":"D gene","type":"exact"},{"name":"D-GENE","type":"exact"},{"name":"INSDC_feature:D_segment","type":"exact"}],"termid":"SO:0000458"}


id: MONDO:0008972
data:
  {"annotated_genes":["SJAG_00326"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87828],"is_not":false,"summary":null,"term":"MONDO:0008972"}]},"cv_name":"mondo","definition":"A condition that impairs the normal development of many parts of the body. The major features of this disorder include skeletal abnormalities, distinctive facial features, intellectual disability, and respiratory problems. The condition is caused by mutations in the PEX7 gene. It is inherited in an autosomal recessive pattern. Rhizomelic chondrodysplasia punctata type 1 is one of five types of rhizomelic chondrodysplasia punctata. The types have similar features and are distinguished by their genetic cause.","direct_ancestors":[{"relation_name":"is_a","term_name":"rhizomelic chondrodysplasia punctata","termid":"MONDO:0015776"},{"relation_name":"is_a","term_name":"syndromic dyslipidemia","termid":"MONDO:0015905"},{"relation_name":"is_a","term_name":"peroxisome biogenesis disorder due to PEX7 defect","termid":"MONDO:0100272"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00326":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0002525","MONDO:0005066","MONDO:0005559","MONDO:0006025","MONDO:0005328","MONDO:0019053"],"is_obsolete":false,"name":"rhizomelic chondrodysplasia punctata type 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:347072","UMLS:C1859133","icd11.foundation:44503513","OMIM:215100","Orphanet:309789","GARD:6049","NANDO:1200763","DOID:0110851"],"synonyms":[{"name":"PBD9","type":"exact"},{"name":"PEX7 rhizomelic chondrodysplasia punctata","type":"exact"},{"name":"Pbd9","type":"exact"},{"name":"RCDP1","type":"exact"},{"name":"Rcdp1","type":"exact"},{"name":"chondrodysplasia punctata, rhizomelic form","type":"related"},{"name":"chondrodystrophia calcificans punctata","type":"related"},{"name":"peroxisome biogenesis disorder 9","type":"exact"},{"name":"rhizomelic chondrodysplasia punctata caused by mutation in PEX7","type":"exact"},{"name":"rhizomelic chondrodysplasia punctata type 1","type":"exact"},{"name":"rhizomelic chondrodysplasia punctata, type 1","type":"exact"}],"termid":"MONDO:0008972","terms_by_termid":{"MONDO:0008972":null},"xrefs":{"Monarch":{"xref_id":"0008972"}}}


id: GO:0006003
data:
  {"annotated_genes":["SJAG_02713","SJAG_02596","SJAG_00039","SJAG_03336"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75101,76757,80561,82022],"is_not":false,"summary":null,"term":"GO:0006003"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving fructose 2,6-bisphosphate. The D enantiomer is an important regulator of the glycolytic and gluconeogenic pathways. It inhibits fructose 1,6-bisphosphatase and activates phosphofructokinase.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00039":null,"SJAG_02596":null,"SJAG_02713":null,"SJAG_03336":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fructose 2,6-bisphosphate metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"fructose 2,6-bisphosphate metabolism","type":"exact"}],"termid":"GO:0006003","terms_by_termid":{"GO:0006003":null}}


id: PBO:0085617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in early stages of meiotic recombination; involved in coordination between the initiation of recombination and the first division of meiosis; part of a complex (Rec107p-Mei4p-Rec114p) required for ds break formation","termid":"PBO:0085617"}


id: GO:0003347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transition where an epicardial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell. The epicardium is a part of the pericardium.","definition_xrefs":["PMID:18722343","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial to mesenchymal transition","termid":"GO:0001837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epicardial cell to mesenchymal cell transition","termid":"GO:0003347"}


id: GO:0031462
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ubiquitin ligase complex in which a cullin from the Cul2 subfamily and a RING domain protein form the catalytic core; substrate specificity is conferred by an elongin-BC adaptor and a SOCS/BC box protein.","definition_xrefs":["PMID:15688063","PMID:15571813"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cullin-RING ubiquitin ligase complex","termid":"GO:0031461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Cul2-RING ubiquitin ligase complex","synonyms":[{"name":"CBC complex","type":"broad"},{"name":"CDL2 complex","type":"exact"},{"name":"CRL2 complex","type":"exact"},{"name":"EC2S complex","type":"broad"},{"name":"ECS complex","type":"broad"},{"name":"SCF2 complex","type":"related"},{"name":"VBC complex","type":"narrow"},{"name":"cullin-RING ligase 2","type":"exact"}],"termid":"GO:0031462"}


id: PBO:0024841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-24(28) sterol reductase Erg4","termid":"PBO:0024841"}


id: MONDO:0009536
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chronic mucocutaneous candidiasis","termid":"MONDO:0015279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093"],"is_obsolete":false,"name":"chronic mucocutaneous candidiasis due to intrinsic defect in lymphoblastic transformation","secondary_identifiers":["OMIM:247450","UMLS:C1855474","MEDGEN:340881","MESH:C565431"],"synonyms":[{"name":"lymphoblastic transformation, intrinsic defect IN","type":"related"},{"name":"lymphoblastic transformation, intrinsic defect type 1N","type":"exact"}],"termid":"MONDO:0009536","xrefs":{"Monarch":{"xref_id":"0009536"}}}


id: GO:0102584
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cyanidin 3-O-[2''-O-xylosyl) 6''-O-(p-coumaroyl) glucoside + UDP-alpha-D-glucose = cyanidin 3-O-[2''-O-(xylosyl)-6''-O-(p-coumaroyl) glucoside] 5-O-glucoside + UDP + H+.","definition_xrefs":["GOC:pz","PMID:15807784"],"gene_count":0,"genotype_count":0,"name":"obsolete cyanidin 3-O-[2''-O-(xylosyl)-6''-O-(p-coumaroyl) glucoside] 5-O-glucosyltransferase activity (obsolete GO:0102584)","termid":"GO:0102584"}


id: MONDO:0030969
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"intellectual disability, autosomal dominant","termid":"MONDO:0100172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual developmental disorder, autosomal dominant 68","secondary_identifiers":["MEDGEN:1802176","OMIM:619934","UMLS:C5677008"],"synonyms":[{"name":"MRD68","type":"exact"},{"name":"intellectual developmental disorder, autosomal dominant 68","type":"exact"},{"name":"mental retardation, autosomal dominant 68","type":"exact"}],"termid":"MONDO:0030969","xrefs":{"Monarch":{"xref_id":"0030969"}}}


id: MONDO:0008585
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A life-threatening condition that can potentially complicate pregnancy. It is named for 3 features of the condition: H emolysis, E levated L iver enzyme levels, and L ow P latelet levels. It typically occurs in the last 3 months of pregnancy (the third trimester) but can also start soon after delivery. A wide range of non-specific symptoms may be present in women with HELLP syndrome. Symptoms may include fatigue; malaise; fluid retention and excess weight gain; headache; nausea and vomiting; pain in the upper right or middle of the abdomen; blurry vision; and rarely, nosebleed or seizures. The cause of HELLP syndrome is not known, but certain risk factors have been associated with the condition. It is most common in women with preeclampsia or eclampsia. If not diagnosed and treated quickly, HELLP syndrome can lead to serious complications for the mother and baby.The main treatment is to deliver the baby as soon as possible, even if premature. Treatment may also include medications needed for the mother or baby, and blood transfusion for severe bleeding problems.","direct_ancestors":[{"relation_name":"is_a","term_name":"severe pre-eclampsia","termid":"MONDO:0001641"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HELLP syndrome","secondary_identifiers":["MEDGEN:58162","UMLS:C0162739","EFO:0007297","MedDRA:10049058","MESH:D017359","GARD:8528","NCIT:C84750","icd11.foundation:1748922908","DOID:13133","ICD10CM:O14.2","Orphanet:244242"],"synonyms":[{"name":"PEE1","type":"related"},{"name":"PREECLAMPSIA/eclampsia 1","type":"related"},{"name":"PREG1","type":"related"},{"name":"hemolysis, elevated liver enzymes, and low platelet count","type":"related"},{"name":"hemolysis, elevated liver enzymes, low platelets in pregnancy","type":"exact"},{"name":"hemolysis, elevated liver enzymes, lowered platelets","type":"related"},{"name":"hemolysis-elevated liver enzymes-low platelet count syndrome","type":"exact"},{"name":"hemolysis-elevated liver enzymes-low platelets syndrome","type":"exact"},{"name":"hypertension, pregnancy-induced","type":"related"},{"name":"toxaemia of pregnancy","type":"related"},{"name":"toxemia of pregnancy","type":"related"}],"termid":"MONDO:0008585","xrefs":{"Monarch":{"xref_id":"0008585"}}}


id: MOD:01806
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-leucine residue to N,N-dimethyl-L-leucine.","definition_xrefs":["PubMed:19522542","RESID:AA0538"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-amino dimethylated residue","termid":"MOD:01686"},{"relation_name":"is_a","term_name":"N-methylated leucine","termid":"MOD:01808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N,N-dimethyl-L-leucine","synonyms":[{"name":"(2S)-2-(dimethylamino)-4-methylpentanoic acid","type":"exact"},{"name":"2-(dimethylamino)-4-methylvaleric acid","type":"exact"},{"name":"2-(dimethylazanyl)-4-methylpentanoic acid","type":"exact"},{"name":"MOD_RES N,N-dimethylleucine","type":"exact"},{"name":"N,N-dimethyl-L-leucine","type":"exact"},{"name":"N,N-dimethylleucine","type":"exact"}],"termid":"MOD:01806"}


id: SO:0000990
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Small non-coding RNA (55-65 nt long) containing highly conserved 5' and 3' ends (16 and 8 nt, respectively) that are predicted to come together to form a stem structure. Identified in the social amoeba Dictyostelium discoideum and localized in the cytoplasm.","definition_xrefs":["PMID:15333696"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"class_I_RNA","synonyms":[{"name":"class I RNA","type":"exact"}],"termid":"SO:0000990"}


id: PBO:0083172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps ORF PRP8/YHR165C","termid":"PBO:0083172"}


id: GO:0004326
data:
  {"annotated_genes":["SJAG_03224","SJAG_00529"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73951,81090],"is_not":false,"summary":null,"term":"GO:0004326"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + tetrahydrofolyl-(Glu)(n) + L-glutamate = ADP + phosphate + tetrahydrofolyl-(Glu)(n+1).","definition_xrefs":["EC:6.3.2.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00529":null,"SJAG_03224":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"tetrahydrofolylpolyglutamate synthase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["RHEA:10580","Reactome:R-HSA-200681","MetaCyc:FOLYLPOLYGLUTAMATESYNTH-RXN","Reactome:R-HSA-197958","Reactome:R-HSA-200682"],"synonyms":[{"name":"FPGS activity","type":"related"},{"name":"N(10)-formyltetrahydropteroyldiglutamate synthetase activity","type":"related"},{"name":"N10-formyltetrahydropteroyldiglutamate synthetase activity","type":"related"},{"name":"folate polyglutamate synthetase activity","type":"related"},{"name":"folylpoly(gamma-glutamate) synthase activity","type":"related"},{"name":"folylpoly-gamma-glutamate synthase activity","type":"related"},{"name":"folylpoly-gamma-glutamate synthetase-dihydrofolate synthetase activity","type":"related"},{"name":"folylpolyglutamate synthase activity","type":"exact"},{"name":"folylpolyglutamate synthetase activity","type":"related"},{"name":"folylpolyglutamyl synthetase activity","type":"related"},{"name":"formyltetrahydropteroyldiglutamate synthetase activity","type":"related"},{"name":"tetrahydrofolate synthase activity","type":"related"},{"name":"tetrahydrofolate:L-glutamate gamma-ligase (ADP-forming) activity","type":"related"},{"name":"tetrahydrofolyl-[gamma-Glu]n:L-glutamate gamma-ligase (ADP-forming)","type":"related"},{"name":"tetrahydropteroyl-[gamma-polyglutamate]:L-glutamate gamma-ligase (ADP-forming)","type":"related"}],"termid":"GO:0004326","terms_by_termid":{"GO:0004326":null}}


id: PR:Q9P7Y4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mediator of RNA polymerase II transcription subunit 14 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12809:SF2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of RNA polymerase II transcription subunit 14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1A4.10c","secondary_identifiers":["UniProtKB:Q9P7Y4"],"synonyms":[{"name":"SPBC1A4.10c","type":"related"},{"name":"Spom972h-MED14","type":"exact"},{"name":"mediator complex subunit 14 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mediator of RNA polymerase II complex subunit pmc1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"pmc1","type":"related"}],"termid":"PR:Q9P7Y4"}


id: GO:0071772
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a bone morphogenetic protein (BMP) stimulus.","definition_xrefs":["GOC:mah","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to growth factor","termid":"GO:0070848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to BMP","synonyms":[{"name":"response to BMP stimulus","type":"exact"},{"name":"response to bone morphogenetic protein stimulus","type":"exact"}],"termid":"GO:0071772"}


id: GO:0042416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dopamine, a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dopamine metabolic process","termid":"GO:0042417"},{"relation_name":"is_a","term_name":"catecholamine biosynthetic process","termid":"GO:0042423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dopamine biosynthetic process","synonyms":[{"name":"dopamine anabolism","type":"exact"},{"name":"dopamine biosynthesis","type":"exact"},{"name":"dopamine formation","type":"exact"},{"name":"dopamine synthesis","type":"exact"}],"termid":"GO:0042416"}


id: PBO:0087812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tetrameric histone acetyltransferase; has similarity to Gcn5p, Hat1p, Elp3p, and Hpa3p; acetylates histones H3 and H4 in vitro and exhibits autoacetylation activity; also acetylates polyamines","termid":"PBO:0087812"}


id: PBO:0003997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase zeta Rev7 (predicted)","termid":"PBO:0003997"}


id: MONDO:0010048
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spastic paraplegia with myoclonic epilepsy","secondary_identifiers":["OMIM:270805","UMLS:C1849114","MESH:C564810","MEDGEN:338615"],"synonyms":[{"name":"spastic paraplegia with myoclonic epilepsy","type":"exact"}],"termid":"MONDO:0010048","xrefs":{"Monarch":{"xref_id":"0010048"}}}


id: PR:000050475
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein kinase wis1 (Schizosaccharomyces pombe) that has been phosphorylated on residues equivalent to Ser-469 and Thr-473 of the amino acid sequence represented by UniProtKB:P33886. Example: UniProtKB:P33886, Ser-469, MOD:00046|Thr-473, MOD:00047.","definition_xrefs":["PMID:12181336","PomBase:VW","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase wis1 (Schizosaccharomyces pombe)","termid":"PR:000050474"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wis1/Phos(S469,T473)","pombase_gene_id":"SPBC409.07c","synonyms":[{"name":"PomBase_original_PRO_term_name: protein kinase wis1 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-wis1/Phos:1","type":"exact"},{"name":"UniProtKB:P33886, Ser-469, MOD:00046|Thr-473, MOD:00047","type":"narrow"},{"name":"wis1/Phos(S469,T473)","type":"exact"}],"termid":"PR:000050475"}


id: FYPO:0002671
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the concentration of one or more proteins released into the growth medium by cells is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased concentration of substance in growth medium","termid":"FYPO:0000800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001155"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001155"],"is_obsolete":false,"name":"increased concentration of protein in growth medium","synonyms":[{"name":"increased concentration of proteins in growth medium","type":"exact"},{"name":"increased level of protein in growth medium","type":"exact"},{"name":"increased release of protein into growth medium","type":"related"}],"termid":"FYPO:0002671"}


id: GO:0120103
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which assembles on the mother centriole during cilium formation, adjacent and proximal to a centriolar distal appendage. In human, it contains ODF2, CNTRL, NIN, CCDC120c and CCDC68.","definition_xrefs":["PMID:27818179","PMID:23213374","GOC:cilia","PMID:28422092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"part_of","term_name":"cilium","termid":"GO:0005929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"centriolar subdistal appendage","synonyms":[{"name":"subdistal appendage of basal body","type":"exact"},{"name":"subdistal appendage of centriole","type":"exact"},{"name":"subdistal appendage of mother centriole","type":"exact"}],"termid":"GO:0120103"}


id: GO:0052754
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GTP + factor gamma-F420-2 + H+ = coenzyme F390-G + diphosphate.","definition_xrefs":["GOC:mengo_curators","MetaCyc:RXN-18273"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanylyltransferase activity","termid":"GO:0070568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0003674","GO:0016779","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"GTP:coenzyme F420 guanyltransferase activity","synonyms":[{"name":"GTP:coenzyme F420 guanylyltransferase activity","type":"exact"},{"name":"coenzyme F390-G synthetase activity","type":"exact"}],"termid":"GO:0052754"}


id: MONDO:1011720
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease, non-human animal","termid":"MONDO:1011331"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subclinical hypocalcemia, non-human animal","secondary_identifiers":["OMIA:002048"],"termid":"MONDO:1011720","xrefs":{"Monarch":{"xref_id":"1011720"}}}


id: GO:2000283
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of an amino acid biosynthetic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"negative regulation of amino acid metabolic process","termid":"GO:0045763"},{"relation_name":"is_a","term_name":"regulation of amino acid biosynthetic process","termid":"GO:2000282"},{"relation_name":"negatively_regulates","term_name":"amino acid biosynthetic process","termid":"GO:0008652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0008150"],"is_obsolete":false,"name":"negative regulation of amino acid biosynthetic process","synonyms":[{"name":"negative regulation of amino acid anabolism","type":"exact"},{"name":"negative regulation of amino acid biosynthesis","type":"exact"},{"name":"negative regulation of amino acid formation","type":"exact"},{"name":"negative regulation of amino acid synthesis","type":"exact"},{"name":"negative regulation of cellular amino acid biosynthetic process","type":"exact"}],"termid":"GO:2000283"}


id: PBO:0051093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy joining 3P (pseudogene)","termid":"PBO:0051093"}


id: FYPO:0007203
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of DNA binding at an rDNA spacer replication fork barrier by a gene product is decreased, when a gene or the bound DNA sequence is mutated. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah","PMID:18794373"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased double-stranded DNA binding","termid":"FYPO:0005018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000653","FYPO:0000652"],"is_obsolete":false,"name":"decreased rDNA spacer replication fork barrier binding","synonyms":[{"name":"decreased DNA binding at rDNA spacer replication fork barrier","type":"exact"},{"name":"reduced rDNA spacer replication fork barrier binding","type":"exact"}],"termid":"FYPO:0007203"}


id: GO:0031346
data:
  {"annotated_genes":["SJAG_03453","SJAG_01794","SJAG_02379","SJAG_04509","SJAG_00514"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91685,92659,89709,95289,113220],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902917"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the process involved in the formation, arrangement of constituent parts, or disassembly of cell projections.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell projection organization","termid":"GO:0031344"},{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"positively_regulates","term_name":"cell projection organization","termid":"GO:0030030"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01794":null,"SJAG_02379":null,"SJAG_03453":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell projection organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of cell projection organization","type":"narrow"},{"name":"positive regulation of cell projection organisation","type":"exact"},{"name":"positive regulation of cell projection organization and biogenesis","type":"related"},{"name":"stimulation of cell projection organization","type":"narrow"},{"name":"up regulation of cell projection organization","type":"exact"},{"name":"up-regulation of cell projection organization","type":"exact"},{"name":"upregulation of cell projection organization","type":"exact"}],"termid":"GO:0031346","terms_by_termid":{"GO:1902917":null}}


id: PBO:0041387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 5 open reading frame 46","termid":"PBO:0041387"}


id: FYPO:0001947
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which progression through the mitotic cell cycle is arrested in anaphase under conditions where arrest does not normally occur, and sister chromatids have not separated. The unseparated chromosomes remain condensed.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete abnormal cell cycle arrest in mitotic anaphase, with unseparated sister chromatids (obsolete FYPO:0001947)","synonyms":[{"name":"abnormal cell cycle arrest in mitotic anaphase, with unseparated sister chromatids, during vegetative growth","type":"exact"},{"name":"abnormal cell cycle arrest in mitotic anaphase, with unseparated, condensed chromosomes","type":"exact"},{"name":"abnormal cell cycle arrest in mitotic anaphase, with unseparated, condensed sister chromatids","type":"exact"},{"name":"abnormal mitotic cell cycle arrest in anaphase, with unseparated sister chromatids","type":"exact"},{"name":"absence of chromosome separation, abnormal mitotic anaphase arrest with condensed chromosomes","type":"exact"}],"termid":"FYPO:0001947"}


id: PBO:0086853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative RNA binding protein; regulates the cell size requirement for passage through Start and commitment to cell division; WHI4 has a paralog, WHI3, that arose from the whole genome duplication","termid":"PBO:0086853"}


id: PBO:0068777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 14, pseudogene","termid":"PBO:0068777"}


id: GO:0016741
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id: GO:0150007
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Clathrin-dependent endocytosis of presynaptic membrane regions comprising synaptic vesicles' membrane constituents. This is a relatively slow process occurring in the range of tens of seconds.","definition_xrefs":["PMID:18579735","PMID:18579748","PMID:28391090","GOC:bc","PMID:16982422","PMID:27252645","GOC:ha","PMID:4348786","PMID:26430111","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular transport","termid":"GO:0046907"},{"relation_name":"is_a","term_name":"synaptic vesicle endocytosis","termid":"GO:0048488"},{"relation_name":"is_a","term_name":"clathrin-dependent endocytosis","termid":"GO:0072583"},{"relation_name":"part_of","term_name":"synaptic vesicle recycling via endosome","termid":"GO:0036466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"clathrin-dependent synaptic vesicle endocytosis","termid":"GO:0150007"}


id: PBO:0027404
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_chromatin_at_replication_origin","termid":"PBO:0027404"}


id: PBO:0085377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane arginine permease; requires phosphatidyl ethanolamine (PE) for localization, exclusively associated with lipid rafts; mutation confers canavanine resistance; CAN1 has a paralog, ALP1, that arose from the whole genome duplication","termid":"PBO:0085377"}


id: MONDO:0001340
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the heart","direct_ancestors":[{"relation_name":"is_a","term_name":"cardiovascular cancer","termid":"MONDO:0002100"},{"relation_name":"is_a","term_name":"thoracic cancer","termid":"MONDO:0003274"},{"relation_name":"is_a","term_name":"heart neoplasm","termid":"MONDO:0021209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005267"],"is_obsolete":false,"name":"heart cancer","secondary_identifiers":["DOID:117","MESH:D006338","NCIT:C3548","UMLS:C0153500","ICD9:164.1","MEDGEN:57787","ICD10CM:C38.0"],"synonyms":[{"name":"Cardiac neoplasm, malignant","type":"exact"},{"name":"Cardiac tumor","type":"broad"},{"name":"Cardiac tumour","type":"broad"},{"name":"cancer of heart","type":"exact"},{"name":"heart cancer","type":"exact"},{"name":"malignant Cardiac neoplasm","type":"exact"},{"name":"malignant Cardiac tumor","type":"exact"},{"name":"malignant Cardiac tumour","type":"exact"},{"name":"malignant heart neoplasm","type":"exact"},{"name":"malignant heart tumor","type":"exact"},{"name":"malignant heart tumour","type":"exact"},{"name":"malignant neoplasm of heart","type":"exact"},{"name":"malignant neoplasm of the heart","type":"exact"},{"name":"malignant tumor of heart","type":"exact"},{"name":"malignant tumor of the heart","type":"exact"},{"name":"malignant tumour of heart","type":"exact"},{"name":"malignant tumour of the heart","type":"exact"},{"name":"tumor of heart","type":"broad"},{"name":"tumour of heart","type":"broad"}],"termid":"MONDO:0001340","xrefs":{"Monarch":{"xref_id":"0001340"}}}


id: PBO:0057787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3085","termid":"PBO:0057787"}


id: GO:0045237
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CXCR1 chemokine receptor.","definition_xrefs":["PMID:11910892","GOC:ceb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interleukin-8 receptor binding","termid":"GO:0005153"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"CXCR1 chemokine receptor binding","synonyms":[{"name":"CXCR1 chemokine receptor ligand","type":"narrow"}],"termid":"GO:0045237"}


id: PBO:0052208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily Q member 4","termid":"PBO:0052208"}


id: MONDO:0003182
data:
  {"annotated_genes":["SJAG_03923","SJAG_03495","SJAG_03598","SJAG_00053","SJAG_04567","SJAG_01317","SJAG_02242","SJAG_03328","SJAG_03815","SJAG_01537","SJAG_02919","SJAG_00853","SJAG_00668","SJAG_01352","SJAG_02286","SJAG_03345","SJAG_04489","SJAG_03170","SJAG_04178","SJAG_01522","SJAG_00754","SJAG_04321","SJAG_01260","SJAG_05289","SJAG_04084","SJAG_04907","SJAG_02695","SJAG_07000","SJAG_04387","SJAG_02509","SJAG_03894","SJAG_02289","SJAG_02399"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88509,88508],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008453"},{"annotations":[88377],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859529"},{"annotations":[87027,89091],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007103"},{"annotations":[88572],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012945"},{"annotations":[88690],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010459"},{"annotations":[87433],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013715"},{"annotations":[87180,87181],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014531"},{"annotations":[88303,88302],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011223"},{"annotations":[88432,88433],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012077"},{"annotations":[87632],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008026"},{"annotations":[87041],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011436"},{"annotations":[86925],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011585"},{"annotations":[88537],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013501"},{"annotations":[87108],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010936"},{"annotations":[86959],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010043"},{"annotations":[88829],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010532"},{"annotations":[87806,87807,87808],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008025"},{"annotations":[88420,88421,88422],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012080"},{"annotations":[88101,88102,88103],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013243"},{"annotations":[87104],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015353"},{"annotations":[87957],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013884"},{"annotations":[87480],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030860"},{"annotations":[87982],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011879"},{"annotations":[87005],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0060585"},{"annotations":[88098],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013853"},{"annotations":[88395],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010190"},{"annotations":[88884],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012890"},{"annotations":[88888],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012891"},{"annotations":[88703],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014485"},{"annotations":[87880],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014874"},{"annotations":[87975],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009669"},{"annotations":[88231],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009673"},{"annotations":[87837],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009672"},{"annotations":[87997],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010056"},{"annotations":[89081],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008458"},{"annotations":[88064],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010338"}]},"cv_name":"mondo","definition":"Anterior horn disease is one of a number of medical disorders affecting the anterior horn of the spinal cord. 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id: PBO:0034774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic cohesin complex ATPase subunit Psm1/Smc1","termid":"PBO:0034774"}


id: PR:O74978
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1827.05c gene.","definition_xrefs":["UniProtKB:O74978","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RNA-binding protein C1827.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1827.05c","synonyms":[{"name":"Spom972h-SPCC1827.05c","type":"exact"}],"termid":"PR:O74978"}


id: GO:0140627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a protein or peptide covalently tagged with ubiquitin, via the DesCEND (destruction via C-end degron) pathway. In the DesCEND pathway, C-terminal residues (C-end degrons) in substrates are recognized by Cul2-RING and Cul4-RING E3 ligases, whereupon the substrates are linked to ubiquitin and then delivered to the proteasome for degradation. C-end degrons can be present in full-length proteins, truncated proteins or proteolytically cleaved forms.","definition_xrefs":["PMID:29779948","PMID:29775578"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome-mediated ubiquitin-dependent protein catabolic process","termid":"GO:0043161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0030163"},{"rel_name":"part_of","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"ubiquitin-dependent protein catabolic process via the C-end degron rule pathway","synonyms":[{"name":"DesCEND","type":"exact"}],"termid":"GO:0140627"}


id: SO:0000320
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Sequences within the intron that modulate splice site selection for some introns.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splice_enhancer","termid":"SO:0000344"},{"relation_name":"part_of","term_name":"spliceosomal_intron_region","termid":"SO:0000841"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intronic_splice_enhancer","synonyms":[{"name":"intronic splice enhancer","type":"exact"}],"termid":"SO:0000320"}


id: PBO:0069540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 810, pseudogene","termid":"PBO:0069540"}


id: PBO:0086512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved across S. cerevisiae strains; deletion decreases transcription of downstream gene ALD6; YPL062W is not an essential gene; null mutant shows decrease in terpenoid production; homozygous diploid mutant shows a decrease in glycogen accumulation","termid":"PBO:0086512"}


id: PBO:0068834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 72, pseudogene","termid":"PBO:0068834"}


id: MONDO:0020603
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genodermatosis with great phenotypic variation and characterized most commonly by ichthyosis, chondrodysplasia punctata (CDP), asymmetric shortening of the limbs, cataracts and short stature.","definition_xrefs":["Orphanet:35173"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"X-linked ichthyosis syndrome","termid":"MONDO:0017269"},{"relation_name":"is_a","term_name":"X-linked chondrodysplasia punctata","termid":"MONDO:0010556"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005093","MONDO:0002525"],"is_obsolete":false,"name":"X-linked chondrodysplasia punctata 2","secondary_identifiers":["DOID:0080352","MEDGEN:79381","OMIM:302960","NORD:1005","GARD:6189","NANDO:1200630","NANDO:2201357","UMLS:C0282102"],"synonyms":[{"name":"CDPX2","type":"exact"},{"name":"CDPXD","type":"exact"},{"name":"Conrad Hunermann Happle syndrome","type":"exact"},{"name":"Conradi Hunermann syndrome","type":"exact"},{"name":"Conradi Hünermann Syndrome","type":"exact"},{"name":"Conradi-Hunermann syndrome","type":"exact"},{"name":"Conradi-Hunermann-Happle syndrome","type":"exact"},{"name":"Conradi-Hünermann-Happle syndrome","type":"exact"},{"name":"EBP chondrodysplasia punctata","type":"exact"},{"name":"Happle syndrome","type":"exact"},{"name":"X-linked chondrodysplasia punctata type 2","type":"exact"},{"name":"chondrodysplasia punctata 2 X-linked dominant","type":"exact"},{"name":"chondrodysplasia punctata 2, X-linked dominant","type":"exact"},{"name":"chondrodysplasia punctata caused by mutation in EBP","type":"exact"},{"name":"chondrodysplasia punctata, X-linked dominant, X-linked dominant","type":"exact"}],"termid":"MONDO:0020603","xrefs":{"Monarch":{"xref_id":"0020603"}}}


id: PBO:0042068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCDC137 pseudogene 1","termid":"PBO:0042068"}


id: MONDO:1011959
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth-hormone deficiency dwarfism,, non-human animal","secondary_identifiers":["OMIA:001473"],"termid":"MONDO:1011959","xrefs":{"Monarch":{"xref_id":"1011959"}}}


id: GO:0090134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of epithelial cells from one site to another that contributes to the migration of mesendodermal tissue.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration involved in gastrulation","termid":"GO:0042074"},{"relation_name":"part_of","term_name":"mesendoderm migration","termid":"GO:0090133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell migration involved in mesendoderm migration","termid":"GO:0090134"}


id: CHEBI:18019
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"An L-alpha-amino acid; the L-isomer of lysine.","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-lysine","termid":"CHEBI:18019"}


id: GO:0061781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Negative regulation of sister chromatid cohesion by the topological unlinking of a cohesin ring to DNA as part of the mitotic cell cycle.","definition_xrefs":["GOC:dph","GOC:mah","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete mitotic cohesin unloading (obsolete GO:0061781)","termid":"GO:0061781"}


id: GO:0015155
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of lactose from one side of a membrane to the other. Lactose is a disaccharide 4-O-beta-D-galactopyranosyl-D-glucose, and constitutes roughly 5% of the milk in almost all mammals.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide transmembrane transporter activity","termid":"GO:0015154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"lactose transmembrane transporter activity","secondary_identifiers":["GO:0019189"],"synonyms":[{"name":"lactose permease activity","type":"exact"},{"name":"lactose/glucose efflux transporter activity","type":"narrow"}],"termid":"GO:0015155"}


id: PBO:0040040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"androgen receptor negatively regulated lncRNA","termid":"PBO:0040040"}


id: PBO:0053331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 163","termid":"PBO:0053331"}


id: GO:0170040
data:
  {"annotated_genes":["SJAG_03434","SJAG_02450","SJAG_03398","SJAG_00937","SJAG_02901","SJAG_04145","SJAG_00714","SJAG_02235","SJAG_03671","SJAG_01903","SJAG_00495","SJAG_00944","SJAG_03861","SJAG_03641"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98228,75916,79794],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019464"},{"annotations":[70209],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042853"},{"annotations":[80147],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019544"},{"annotations":[80145,115062],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010121"},{"annotations":[72618],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006533"},{"annotations":[115795],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019450"},{"annotations":[81367,93525],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006538"},{"annotations":[71996,79870],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010133"},{"annotations":[73863],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006567"},{"annotations":[74829],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006574"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of any amino acid that is incorporated into protein naturally by ribosomal translation of mRNA, and that has a specific codon for translation from mRNA to protein.","definition_xrefs":["GOC:ew"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"},{"relation_name":"is_a","term_name":"proteinogenic amino acid metabolic process","termid":"GO:0170039"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00495":null,"SJAG_00714":null,"SJAG_00937":null,"SJAG_00944":null,"SJAG_01903":null,"SJAG_02235":null,"SJAG_02450":null,"SJAG_02901":null,"SJAG_03398":null,"SJAG_03434":null,"SJAG_03641":null,"SJAG_03671":null,"SJAG_03861":null,"SJAG_04145":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"proteinogenic amino acid catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"proteinogenic amino acid breakdown","type":"exact"},{"name":"proteinogenic amino acid catabolism","type":"exact"},{"name":"proteinogenic amino acid degradation","type":"exact"}],"termid":"GO:0170040","terms_by_termid":{"GO:0006533":null,"GO:0006538":null,"GO:0006567":null,"GO:0006574":null,"GO:0010121":null,"GO:0010133":null,"GO:0019450":null,"GO:0019464":null,"GO:0019544":null,"GO:0042853":null}}


id: FYECO:0000308
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which doxorubicin was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ doxorubicin","synonyms":[{"name":"+ 14-hydroxydaunomycin ","type":"related"},{"name":"+ 14-hydroxydaunorubicine ","type":"related"},{"name":"+ adriamycin","type":"related"}],"termid":"FYECO:0000308"}


id: GO:0031953
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or decreases the rate of the phosphorylation by a protein of one or more of its own residues.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein phosphorylation","termid":"GO:0001933"},{"relation_name":"is_a","term_name":"regulation of protein autophosphorylation","termid":"GO:0031952"},{"relation_name":"negatively_regulates","term_name":"protein autophosphorylation","termid":"GO:0046777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein autophosphorylation","synonyms":[{"name":"down regulation of protein amino acid autophosphorylation","type":"exact"},{"name":"down-regulation of protein amino acid autophosphorylation","type":"exact"},{"name":"downregulation of protein amino acid autophosphorylation","type":"exact"},{"name":"inhibition of protein amino acid autophosphorylation","type":"narrow"},{"name":"negative regulation of protein amino acid autophosphorylation","type":"exact"}],"termid":"GO:0031953"}


id: GO:0060393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the rate, frequency or extent of pathway-restricted SMAD protein phosphorylation. Pathway-restricted SMAD proteins and common-partner SMAD proteins are involved in the transforming growth factor beta receptor signaling pathways.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of pathway-restricted SMAD protein phosphorylation (obsolete GO:0060393)","termid":"GO:0060393"}


id: MONDO:1012941
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cleft palate that occurs in cattle due to a mutation in the MYH3 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleft palate, cattle","termid":"MONDO:1010530"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft palate, MYH3-related, cattle","secondary_identifiers":["OMIA:002590-9913"],"termid":"MONDO:1012941","xrefs":{"Monarch":{"xref_id":"1012941"}}}


id: GO:0045807
data:
  {"annotated_genes":["SJAG_00845"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105518],"is_not":false,"summary":null,"term":"GO:0045807"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of endocytosis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endocytosis","termid":"GO:0030100"},{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"positively_regulates","term_name":"endocytosis","termid":"GO:0006897"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00845":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"positive regulation of endocytosis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of endocytosis","type":"narrow"},{"name":"stimulation of endocytosis","type":"narrow"},{"name":"up regulation of endocytosis","type":"exact"},{"name":"up-regulation of endocytosis","type":"exact"},{"name":"upregulation of endocytosis","type":"exact"}],"termid":"GO:0045807","terms_by_termid":{"GO:0045807":null}}


id: MONDO:0005750
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An Ephemerovirus infection of cattle caused by bovine ephemeral fever virus (ephemeral fever virus, bovine). It is characterized by respiratory symptoms, increased oropharyngeal secretions and lacrimation, joint pains, tremor, and stiffness.","definition_xrefs":["MESH:D004810"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cattle disease","termid":"MONDO:0024913"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ephemeral fever","secondary_identifiers":["EFO:0007258"],"termid":"MONDO:0005750","xrefs":{"Monarch":{"xref_id":"0005750"}}}


id: MONDO:0024280
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An arthritis affecting five or more separate joints.","definition_xrefs":["NCIT:C26996"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arthritic joint disease","termid":"MONDO:0005578"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyarticular arthritis","secondary_identifiers":["SCTID:416956002","MEDGEN:56408","UMLS:C0162323"],"synonyms":[{"name":"polyarthritis","type":"exact"},{"name":"polyarticular arthritis","type":"exact"}],"termid":"MONDO:0024280","xrefs":{"Monarch":{"xref_id":"0024280"}}}


id: MONDO:0034663
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic inflammatory or rheumatoid-like osteoarthropathy (obsolete MONDO:0034663)","termid":"MONDO:0034663","xrefs":{"Monarch":{"xref_id":"0034663"}}}


id: PBO:0078136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 15 (pseudogene)","termid":"PBO:0078136"}


id: PBO:0040518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"axin 2","termid":"PBO:0040518"}


id: PBO:0074198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 39 member 8","termid":"PBO:0074198"}


id: MONDO:0008584
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"torus palatinus and torus mandibularis","secondary_identifiers":["UMLS:C1861044","MESH:C566043","OMIM:189700","MEDGEN:349942"],"synonyms":[{"name":"torus palatinus and torus mandibularis","type":"exact"}],"termid":"MONDO:0008584","xrefs":{"Monarch":{"xref_id":"0008584"}}}


id: FYPO:0008313
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which insertion of the spindle pole body into the nuclear envelope during the first meiotic nuclear division is normal.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal meiotic spindle pole body insertion into nuclear envelope in meiosis I","termid":"FYPO:0008313"}


id: PBO:0077271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM11 divergent transcript","termid":"PBO:0077271"}


id: PBO:0086278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a potential role in cell survival pathways; required for the diauxic growth shift; expression in mammalian cells increases survival under conditions inducing apoptosis; mutant has increased aneuploidy tolerance","termid":"PBO:0086278"}


id: PBO:0038750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTR1A pseudogene 1","termid":"PBO:0038750"}


id: FYPO:0003568
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the insertion of a spindle pole body (SPB) into the nuclear envelope is abnormal, and the SPB enters the nucleus. An open fenestra remains present in the nuclear envelope.","definition_xrefs":["PomBase:mah","PMID:24963130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle pole body insertion into nuclear envelope","termid":"FYPO:0003567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"abnormal mitotic spindle pole body insertion into nuclear envelope, with spindle pole body in nucleoplasm","synonyms":[{"name":"SPB unanchored to nuclear envelope","type":"related"},{"name":"abnormal establishment of mitotic spindle pole body localization to nuclear envelope, with spindle pole body in nucleoplasm","type":"exact"},{"name":"abnormal mitotic SPB insertion into nuclear envelope, with spindle pole body in nucleoplasm","type":"exact"},{"name":"abnormal mitotic spindle pole body insertion into nuclear envelope, with spindle pole body in nucleoplasm, during mitotic cell cycle","type":"related"},{"name":"abnormal mitotic spindle pole body insertion into nuclear envelope, with spindle pole body in nucleoplasm, during vegetative growth","type":"exact"},{"name":"spindle pole body in nucleoplasm, unanchored to nuclear envelope","type":"related"},{"name":"spindle pole body unanchored to nuclear envelope","type":"related"},{"name":"unanchored spindle pole bodies","type":"related"}],"termid":"FYPO:0003568"}


id: GO:0042221
data:
  {"annotated_genes":["SJAG_00472","SJAG_03081","SJAG_02774","SJAG_03288","SJAG_04668","SJAG_01134","SJAG_03631","SJAG_06621","SJAG_04516","SJAG_02945","SJAG_00131","SJAG_00993","SJAG_04345","SJAG_02010","SJAG_03185","SJAG_05022","SJAG_00903","SJAG_02433","SJAG_01078","SJAG_03797","SJAG_00044","SJAG_04608","SJAG_03828","SJAG_02573","SJAG_01084","SJAG_02685","SJAG_01199","SJAG_02883","SJAG_03924","SJAG_03896","SJAG_01978","SJAG_03653","SJAG_02495","SJAG_02276","SJAG_05256","SJAG_01254","SJAG_05274","SJAG_04063","SJAG_01584","SJAG_04018","SJAG_02342","SJAG_02044","SJAG_01150","SJAG_01404","SJAG_03476","SJAG_04429","SJAG_01718","SJAG_04953","SJAG_00530","SJAG_04404","SJAG_00419","SJAG_00126","SJAG_03951","SJAG_04399","SJAG_03879","SJAG_01709","SJAG_01628","SJAG_03623","SJAG_04403","SJAG_04384","SJAG_00027","SJAG_01457","SJAG_06611","SJAG_00681","SJAG_03340","SJAG_02694","SJAG_02599","SJAG_02515","SJAG_00614","SJAG_00489","SJAG_04726","SJAG_00365","SJAG_04788","SJAG_03786","SJAG_03841","SJAG_01768","SJAG_03414","SJAG_02106","SJAG_03209","SJAG_05181","SJAG_02183","SJAG_02135","SJAG_01162","SJAG_00141","SJAG_01656","SJAG_00984","SJAG_01051","SJAG_03153","SJAG_01585","SJAG_01754","SJAG_01145","SJAG_02244","SJAG_04205","SJAG_03166","SJAG_00403","SJAG_02247","SJAG_07000","SJAG_04583","SJAG_01869","SJAG_03363","SJAG_02907","SJAG_03799","SJAG_02960","SJAG_01351","SJAG_00941","SJAG_04632","SJAG_03227","SJAG_01344","SJAG_04125","SJAG_03345","SJAG_04312","SJAG_01216","SJAG_02858","SJAG_02485","SJAG_00766","SJAG_01612","SJAG_00179","SJAG_02630","SJAG_02444","SJAG_00409","SJAG_01699","SJAG_03903","SJAG_00988","SJAG_00627","SJAG_01651","SJAG_01596","SJAG_04612","SJAG_00996","SJAG_02988","SJAG_01528","SJAG_02973","SJAG_01233","SJAG_04454","SJAG_00642","SJAG_00790","SJAG_00990","SJAG_02091","SJAG_03108","SJAG_01855","SJAG_00219","SJAG_03330","SJAG_03657","SJAG_04242","SJAG_01803","SJAG_00931","SJAG_04674","SJAG_01345","SJAG_03316","SJAG_04823","SJAG_00661","SJAG_04311","SJAG_01854","SJAG_04904","SJAG_02923","SJAG_00270","SJAG_01995","SJAG_01734","SJAG_00574","SJAG_03303","SJAG_01858","SJAG_03032","SJAG_04036","SJAG_01973","SJAG_00221","SJAG_00948","SJAG_03494","SJAG_03497","SJAG_03893","SJAG_02539","SJAG_02249","SJAG_01626","SJAG_00596","SJAG_04026","SJAG_02592","SJAG_00668","SJAG_06622","SJAG_01292"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117395,110856,111367,96038,103668,108680,118425,108330,107734],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010619"},{"annotations":[104688,115323,89888,98916,89791,116560,120048,120482,120623,114146,116459,101663,96770,91927,114869,115361,100179,101016,100830,105440,110559,96497],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990748"},{"annotations":[102686,114591],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0110095"},{"annotations":[110270,120073,95119,72591,98826,98864],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0098849"},{"annotations":[115603],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140114"},{"annotations":[97014,106878,119234,101821,110678,120170],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061692"},{"annotations":[89215,104037],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070458"},{"annotations":[94215],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071474"},{"annotations":[70312,57721,108631,64761,66535,69690],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0098869"},{"annotations":[90695],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071276"},{"annotations":[115217,102815,116537,99922,117988,112010],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071277"},{"annotations":[79302],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071244"},{"annotations":[91328],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071473"},{"annotations":[103039,118851,111698,113566],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071456"},{"annotations":[94948],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071248"},{"annotations":[104038],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071500"},{"annotations":[96177,118145,59413,93706,116327,97788,108335,104616,106354,118944],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071470"},{"annotations":[110778,93971,90377,95372,110775,116328,79299,75314,99437,91905,78767,68479,110780,97805,65184,77593,80836,103678,109640,71985,78561,92700,76946,76585,110781,110776,69842,92006,75016,110779,110777,61119],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034599"},{"annotations":[116538],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035865"},{"annotations":[101995],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071472"},{"annotations":[72590],"is_not":false,"rel_names":["p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