# terms

id: PBO:0048370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase activating protein and VPS9 domains 1","termid":"PBO:0048370"}


id: GO:0004356
data:
  {"annotated_genes":["SJAG_00359","SJAG_01845"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[61869,73214],"is_not":false,"summary":null,"term":"GO:0004356"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-glutamate + NH4+ = ADP + H+ + L-glutamine + phosphate.","definition_xrefs":["RHEA:16169"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonia ligase activity","termid":"GO:0016211"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00359":null,"SJAG_01845":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"glutamine synthetase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"secondary_identifiers":["EC:6.3.1.2","MetaCyc:GLUTAMINESYN-RXN","Reactome:R-HSA-70606","KEGG_REACTION:R00253"],"synonyms":[{"name":"L-glutamine synthetase activity","type":"related"},{"name":"glutamate-ammonia ligase activity","type":"exact"}],"termid":"GO:0004356","terms_by_termid":{"GO:0004356":null}}


id: PBO:0041654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel auxiliary subunit beta 4","termid":"PBO:0041654"}


id: GO:0097308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a farnesol stimulus.","definition_xrefs":["PMID:11425711","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"cellular response to alcohol","termid":"GO:0097306"},{"relation_name":"is_a","term_name":"response to farnesol","termid":"GO:0097307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to farnesol","termid":"GO:0097308"}


id: GO:0052240
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a higher concentration of a specific chemical within a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive chemotaxis in other organism involved in symbiotic interaction (obsolete GO:0052240)","synonyms":[{"name":"positive chemotaxis in other organism during symbiotic interaction","type":"related"},{"name":"positive chemotaxis within other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052240"}


id: PBO:0074646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 36C","termid":"PBO:0074646"}


id: PBO:0029421
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_palmitoylation_during_vegetative_growth","termid":"PBO:0029421"}


id: PBO:0078098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking protein particle complex subunit 6A","termid":"PBO:0078098"}


id: MONDO:0001512
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disease of orbital part of eye adnexa","termid":"MONDO:0004751"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intermittent proptosis","secondary_identifiers":["MEDGEN:509886","DOID:12363","ICD9:376.34","UMLS:C0155270","ICD10CM:H05.25","SCTID:49774006"],"synonyms":[{"name":"intermittent exophthalmos","type":"exact"}],"termid":"MONDO:0001512","xrefs":{"Monarch":{"xref_id":"0001512"}}}


id: GO:1900704
data:
  {"annotated_genes":["SJAG_00792"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95869],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905569"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of siderophore biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"siderophore biosynthetic process","termid":"GO:0019290"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00792":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"regulation of siderophore biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of siderochrome biosynthesis","type":"narrow"},{"name":"regulation of siderochrome biosynthetic process","type":"narrow"},{"name":"regulation of siderophore anabolism","type":"exact"},{"name":"regulation of siderophore biosynthesis","type":"exact"},{"name":"regulation of siderophore biosynthetic process, peptide formation","type":"narrow"},{"name":"regulation of siderophore biosynthetic process, peptide modification","type":"narrow"},{"name":"regulation of siderophore formation","type":"exact"},{"name":"regulation of siderophore synthesis","type":"exact"}],"termid":"GO:1900704","terms_by_termid":{"GO:1905569":null}}


id: PBO:0000914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIIC complex A box associated subunit Sfc1","termid":"PBO:0000914"}


id: GO:1902949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of tau-protein kinase activity.","definition_xrefs":["PMID:22986780","GO_REF:0000059","PMID:15897157","GOC:TermGenie","GOC:sjp"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of tau-protein kinase activity (obsolete GO:1902949)","secondary_identifiers":["Reactome:R-HSA-9032845"],"synonyms":[{"name":"activation of CDK5/p23","type":"related"},{"name":"activation of GSK","type":"related"},{"name":"activation of STK31","type":"related"},{"name":"activation of TPK","type":"related"},{"name":"activation of TPK I","type":"related"},{"name":"activation of TPK II","type":"related"},{"name":"activation of TTK","type":"related"},{"name":"activation of [Tau protein] kinase activity","type":"narrow"},{"name":"activation of brain protein kinase PK40erk activity","type":"narrow"},{"name":"activation of cdk5/p20","type":"related"},{"name":"activation of glycogen synthase kinase-3beta activity","type":"narrow"},{"name":"activation of protein tau kinase activity","type":"narrow"},{"name":"activation of tau kinase activity","type":"narrow"},{"name":"activation of tau protein kinase activity","type":"narrow"},{"name":"activation of tau-protein kinase I activity","type":"narrow"},{"name":"activation of tau-protein kinase II activity","type":"narrow"},{"name":"activation of tau-protein kinase activity","type":"narrow"},{"name":"activation of tau-tubulin kinase activity","type":"narrow"},{"name":"positive regulation of CDK5/p23","type":"related"},{"name":"positive regulation of GSK","type":"related"},{"name":"positive regulation of STK31","type":"related"},{"name":"positive regulation of TPK","type":"related"},{"name":"positive regulation of TPK I","type":"related"},{"name":"positive regulation of TPK II","type":"related"},{"name":"positive regulation of TTK","type":"related"},{"name":"positive regulation of [Tau protein] kinase activity","type":"exact"},{"name":"positive regulation of brain protein kinase PK40erk activity","type":"narrow"},{"name":"positive regulation of cdk5/p20","type":"related"},{"name":"positive regulation of glycogen synthase kinase-3beta activity","type":"exact"},{"name":"positive regulation of protein tau kinase activity","type":"exact"},{"name":"positive regulation of tau kinase activity","type":"exact"},{"name":"positive regulation of tau protein kinase activity","type":"exact"},{"name":"positive regulation of tau-protein kinase I activity","type":"narrow"},{"name":"positive regulation of tau-protein kinase II activity","type":"narrow"},{"name":"positive regulation of tau-tubulin kinase activity","type":"narrow"},{"name":"up regulation of CDK5/p23","type":"related"},{"name":"up regulation of GSK","type":"related"},{"name":"up regulation of STK31","type":"related"},{"name":"up regulation of TPK","type":"related"},{"name":"up regulation of TPK I","type":"related"},{"name":"up regulation of TPK II","type":"related"},{"name":"up regulation of TTK","type":"related"},{"name":"up regulation of [Tau protein] kinase activity","type":"exact"},{"name":"up regulation of brain protein kinase PK40erk activity","type":"narrow"},{"name":"up regulation of cdk5/p20","type":"related"},{"name":"up regulation of glycogen synthase kinase-3beta activity","type":"exact"},{"name":"up regulation of protein tau kinase activity","type":"exact"},{"name":"up regulation of tau kinase activity","type":"exact"},{"name":"up regulation of tau protein kinase activity","type":"exact"},{"name":"up regulation of tau-protein kinase I activity","type":"narrow"},{"name":"up regulation of tau-protein kinase II activity","type":"narrow"},{"name":"up regulation of tau-protein kinase activity","type":"exact"},{"name":"up regulation of tau-tubulin kinase activity","type":"narrow"},{"name":"up-regulation of CDK5/p23","type":"related"},{"name":"up-regulation of GSK","type":"related"},{"name":"up-regulation of STK31","type":"related"},{"name":"up-regulation of TPK","type":"related"},{"name":"up-regulation of TPK I","type":"related"},{"name":"up-regulation of TPK II","type":"related"},{"name":"up-regulation of TTK","type":"related"},{"name":"up-regulation of [Tau protein] kinase activity","type":"exact"},{"name":"up-regulation of brain protein kinase PK40erk activity","type":"narrow"},{"name":"up-regulation of cdk5/p20","type":"related"},{"name":"up-regulation of glycogen synthase kinase-3beta activity","type":"exact"},{"name":"up-regulation of protein tau kinase activity","type":"exact"},{"name":"up-regulation of tau kinase activity","type":"exact"},{"name":"up-regulation of tau protein kinase activity","type":"exact"},{"name":"up-regulation of tau-protein kinase I activity","type":"narrow"},{"name":"up-regulation of tau-protein kinase II activity","type":"narrow"},{"name":"up-regulation of tau-protein kinase activity","type":"exact"},{"name":"up-regulation of tau-tubulin kinase activity","type":"narrow"},{"name":"upregulation of CDK5/p23","type":"related"},{"name":"upregulation of GSK","type":"related"},{"name":"upregulation of STK31","type":"related"},{"name":"upregulation of TPK","type":"related"},{"name":"upregulation of TPK I","type":"related"},{"name":"upregulation of TPK II","type":"related"},{"name":"upregulation of TTK","type":"related"},{"name":"upregulation of [Tau protein] kinase activity","type":"exact"},{"name":"upregulation of brain protein kinase PK40erk activity","type":"narrow"},{"name":"upregulation of cdk5/p20","type":"related"},{"name":"upregulation of glycogen synthase kinase-3beta activity","type":"exact"},{"name":"upregulation of protein tau kinase activity","type":"exact"},{"name":"upregulation of tau kinase activity","type":"exact"},{"name":"upregulation of tau protein kinase activity","type":"exact"},{"name":"upregulation of tau-protein kinase I activity","type":"narrow"},{"name":"upregulation of tau-protein kinase II activity","type":"narrow"},{"name":"upregulation of tau-protein kinase activity","type":"exact"},{"name":"upregulation of tau-tubulin kinase activity","type":"narrow"}],"termid":"GO:1902949"}


id: PBO:0017455
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-input_of","termid":"PBO:0017455"}


id: MONDO:1010972
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dysautonomia that occurs in rabbit.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysautonomia, non-human animal","termid":"MONDO:1010229"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dysautonomia, rabbit","secondary_identifiers":["OMIA:000312-9986"],"termid":"MONDO:1010972","xrefs":{"Monarch":{"xref_id":"1010972"}}}


id: PBO:0040940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 11","termid":"PBO:0040940"}


id: PBO:0081158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein, FOG family member 2","termid":"PBO:0081158"}


id: GO:0110024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cardiac muscle myoblast proliferation.","definition_xrefs":["GOC:BHF_miRNA","GOC:rph","GOC:BHF","PMID:26512644"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardiac muscle myoblast proliferation","termid":"GO:0110022"},{"relation_name":"is_a","term_name":"positive regulation of myoblast proliferation","termid":"GO:2000288"},{"relation_name":"positively_regulates","term_name":"cardiac muscle myoblast proliferation","termid":"GO:0110021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac muscle myoblast proliferation","termid":"GO:0110024"}


id: FYPO:0005971
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which proton transport is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport","termid":"FYPO:0001720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal proton transport","synonyms":[{"name":"abnormal H+ ion transport","type":"exact"},{"name":"abnormal hydrogen ion transport","type":"exact"},{"name":"abnormal proton transmembrane transport","type":"exact"}],"termid":"FYPO:0005971"}


id: PBO:0065949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD17 checkpoint clamp loader component","termid":"PBO:0065949"}


id: GO:1901758
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of butirosin.","definition_xrefs":["GOC:yaf","GOC:TermGenie","UniPathway:UPA00964"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside biosynthetic process","termid":"GO:0016138"},{"relation_name":"is_a","term_name":"polyol biosynthetic process","termid":"GO:0046173"},{"relation_name":"is_a","term_name":"butirosin metabolic process","termid":"GO:1901756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"butirosin biosynthetic process","synonyms":[{"name":"butirosin anabolism","type":"exact"},{"name":"butirosin biosynthesis","type":"exact"},{"name":"butirosin formation","type":"exact"},{"name":"butirosin synthesis","type":"exact"}],"termid":"GO:1901758"}


id: GO:0017021
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete myosin phosphatase myosin binding (obsolete GO:0017021)","synonyms":[{"name":"myosin phosphatase myosin binding","type":"exact"}],"termid":"GO:0017021"}


id: GO:0072764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a reversine stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to purine-containing compound","termid":"GO:0071415"},{"relation_name":"is_a","term_name":"response to reversine","termid":"GO:1901596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to reversine","termid":"GO:0072764"}


id: PBO:0076854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tet methylcytosine dioxygenase 1 pseudogene 1","termid":"PBO:0076854"}


id: PATO:0000451
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000451 pilosity value (obsolete PATO:0000451)","termid":"PATO:0000451"}


id: GO:0075530
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a virus establishes a latent state within its host as an episome, where the viral genome remains silent in the cytoplasm or nucleus as linear structure.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of episomal latency","termid":"GO:0075720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of latency as a linear episome","synonyms":[{"name":"establishment of latency as a linear plasmid","type":"exact"},{"name":"establishment of linear plasmid latency","type":"exact"}],"termid":"GO:0075530"}


id: MONDO:1010903
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any neuronal ceroid lipofuscinosis that occurs in pigs due to a mutation in the CLN3 gene created using gene editing.","definition_xrefs":["OMIA:002432-9823"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuronal ceroid lipofuscinosis, pig","termid":"MONDO:1011577"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal ceroid lipofuscinosis, CLN3-related, pig","synonyms":[{"name":"CLN3","type":"exact"},{"name":"neuronal ceroid lipofuscinosis, 3, pig","type":"related"}],"termid":"MONDO:1010903","xrefs":{"Monarch":{"xref_id":"1010903"}}}


id: PBO:0082573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chitin synthase I; requires activation from zymogenic form in order to catalyze the transfer of N-acetylglucosamine (GlcNAc) to chitin; required for repairing the chitin septum during cytokinesis; transcription activated by mating factor","termid":"PBO:0082573"}


id: MONDO:0001307
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An abscess of the cornea.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deep keratitis","termid":"MONDO:0004903"},{"relation_name":"is_a","term_name":"abscess","termid":"MONDO:0005227"},{"relation_name":"is_a","term_name":"corneal infection","termid":"MONDO:0023865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"corneal abscess","secondary_identifiers":["NCIT:C26969","UMLS:C0155091","icd11.foundation:485862779","SCTID:64366002","MEDGEN:56351","ICD10CM:H16.31","DOID:11543","ICD9:370.55"],"termid":"MONDO:0001307","xrefs":{"Monarch":{"xref_id":"0001307"}}}


id: PBO:0113060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the EKC/KEOPS complex; EKC/KEOPS complex is required for t6A tRNA modification and telomeric TG1-3 recombination; may have role in transcription; Cgi121p is dispensable for tRNA modification; other complex members are Bud32p, Kae1p, Pcc1p, and Gon7p; ortholog of human TPRKB","termid":"PBO:0113060"}


id: PBO:0000008
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-occurs_in","termid":"PBO:0000008"}


id: PBO:0081547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 467","termid":"PBO:0081547"}


id: PBO:0091048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichol-phosphate mannosyltransferase regulatory subunit Dpm2","termid":"PBO:0091048"}


id: MONDO:0021553
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myelitis","termid":"MONDO:0002565"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transverse myelitis","secondary_identifiers":["icd11.foundation:1328350091","ICD9:323.9","DOID:0080743","MedDRA:10028527","UMLS:C0026976","MEDGEN:6488","SCTID:16631009"],"synonyms":[{"name":"Myelitis, Transverse","type":"related"},{"name":"Transverse Myelitis","type":"related"},{"name":"Transverse Myelopathy Syndrome","type":"related"},{"name":"Transverse Myelopathy Syndromes","type":"related"},{"name":"Transverse myelitis","type":"related"},{"name":"Transverse myelopathy syndrome","type":"related"},{"name":"transverse myelitis","type":"exact"},{"name":"transverse myelopathy syndrome","type":"exact"}],"termid":"MONDO:0021553","xrefs":{"Monarch":{"xref_id":"0021553"}}}


id: MONDO:0009282
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder of fatty acid and amino acid oxidation, caused by mutations in ETFDH, ETFA, or ETFB, and is a clinically heterogeneous disorder ranging from a severe neonatal presentation with metabolic acidosis, cardiomyopathy and liver disease, to a mild childhood/adult disease with episodic metabolic decompensation, muscle weakness, and respiratory failure.","definition_xrefs":["Orphanet:26791"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutaric aciduria","termid":"MONDO:0000129"},{"relation_name":"is_a","term_name":"inborn mitochondrial metabolism disorder","termid":"MONDO:0004069"},{"relation_name":"is_a","term_name":"acyl-CoA dehydrogenase deficiency","termid":"MONDO:0017714"},{"relation_name":"is_a","term_name":"familial hypertrophic cardiomyopathy","termid":"MONDO:0024573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525","MONDO:0004069","MONDO:0005267"],"is_obsolete":false,"name":"multiple acyl-CoA dehydrogenase deficiency","secondary_identifiers":["GARD:6523","NANDO:2200502","ICD10CM:E71.313","MEDGEN:75696","OMIM:231680","NCIT:C84907","icd11.foundation:977130875","NORD:1192","UMLS:C0268596","DOID:0060358","NANDO:1200801"],"synonyms":[{"name":"EMA","type":"related"},{"name":"Etfa deficiency","type":"narrow"},{"name":"Etfb deficiency","type":"narrow"},{"name":"Etfdh deficiency","type":"narrow"},{"name":"Ga 2","type":"related"},{"name":"Glutaric Aciduria Type II","type":"exact"},{"name":"MAD deficiency","type":"exact"},{"name":"MADD","type":"exact"},{"name":"electron transfer flavoprotein deficiency","type":"exact"},{"name":"electron transfer flavoprotein ubiquinone oxidoreductase deficiency","type":"exact"},{"name":"ethylmalonic-Adipicaciduria","type":"related"},{"name":"glutaric acidemia 2","type":"related"},{"name":"glutaric acidemia 2A","type":"narrow"},{"name":"glutaric acidemia 2B","type":"narrow"},{"name":"glutaric acidemia 2C","type":"narrow"},{"name":"glutaric acidemia IIA","type":"narrow"},{"name":"glutaric acidemia IIB","type":"narrow"},{"name":"glutaric acidemia IIC","type":"narrow"},{"name":"glutaric acidemia type 2","type":"exact"},{"name":"glutaric acidemia type II","type":"exact"},{"name":"glutaric aciduria 2","type":"related"},{"name":"glutaric aciduria type 2","type":"exact"},{"name":"glutaric aciduria, type 2","type":"exact"},{"name":"multiple acyl Coenzyme A dehydrogenase deficiency","type":"exact"},{"name":"multiple acyl-CoA dehydrogenase deficiency","type":"exact"}],"termid":"MONDO:0009282","xrefs":{"Monarch":{"xref_id":"0009282"}}}


id: PBO:0040154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASH2L pseudogene 3","termid":"PBO:0040154"}


id: PBO:0083356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the verified gene NUM1/YDR150W; null mutation blocks anaerobic growth","termid":"PBO:0083356"}


id: PBO:0047635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"four-jointed box kinase 1","termid":"PBO:0047635"}


id: MONDO:0002986
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete neuromuscular disease (obsolete MONDO:0002986)","termid":"MONDO:0002986","xrefs":{"Monarch":{"xref_id":"0002986"}}}


id: PBO:0051111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1-67 (pseudogene)","termid":"PBO:0051111"}


id: PBO:0080142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vasodilator stimulated phosphoprotein","termid":"PBO:0080142"}


id: PBO:0066950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 252","termid":"PBO:0066950"}


id: PBO:0054406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1802","termid":"PBO:0054406"}


id: PBO:0029906
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K4_dimethylation_at_centromere_outer_repeat","termid":"PBO:0029906"}


id: GO:0045272
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A subcomplex of the respiratory chain located in the plasma membrane. It contains about 25 different polypeptide subunits, including NADH dehydrogenase (ubiquinone), flavin mononucleotide and several different iron-sulfur clusters containing non-heme iron. The iron undergoes oxidation-reduction between Fe(II) and Fe(III), and catalyzes proton translocation linked to the oxidation of NADH by ubiquinone. Examples of this component are found in bacterial species.","definition_xrefs":["ISBN:0198547684","GOC:mtg_sensu"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma membrane respiratory chain complex I (obsolete GO:0045272)","synonyms":[{"name":"NADH dehydrogenase (ubiquinone) complex","type":"broad"},{"name":"respiratory chain complex I","type":"broad"}],"termid":"GO:0045272"}


id: MONDO:0016462
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Isolated agammaglobulinemia (IA) is the non-syndromic form of agammaglobulinemia, a primary immunodeficiency disease, and is characterized by deficient gamma globulins and associated predisposition to frequent and recurrent infections from infancy.","definition_xrefs":["Orphanet:229717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"agammaglobulinemia","termid":"MONDO:0015977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"isolated agammaglobulinemia","secondary_identifiers":["UMLS:C4707181","MEDGEN:1639972","GARD:17155","SCTID:764858009"],"synonyms":[{"name":"isolated hypogammaglobulinemia","type":"exact"},{"name":"nonsyndromic agammaglobulinemia","type":"exact"}],"termid":"MONDO:0016462","xrefs":{"Monarch":{"xref_id":"0016462"}}}


id: PBO:0059694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 2","termid":"PBO:0059694"}


id: GO:0140700
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + GTP = 2 diphosphate + cyclic G-P(3'-5')A-P(2'-5') (cyclic 3',2' GAMP).","definition_xrefs":["PMID:34261127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclic GMP-AMP synthase activity","termid":"GO:0140699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016779","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"3',2'-cyclic GMP-AMP synthase activity","synonyms":[{"name":"3',2' cyclic-GMP-AMP synthase activity","type":"exact"},{"name":"3',2'-cyclic GAMP synthase activity","type":"exact"}],"termid":"GO:0140700"}


id: GO:0090512
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A plasma membrane part that is composed of a furrow-like plasma membrane domain and associated integral transmembrane proteins.","definition_xrefs":["GOC:al","GOC:vw","PMID:22368779"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane raft","termid":"GO:0044853"},{"relation_name":"part_of","term_name":"eisosome","termid":"GO:0032126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"eisosome membrane domain/MCC","termid":"GO:0090512"}


id: PR:O74956
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrps8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74956"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"37S ribosomal protein subunit S8, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC736.10c","synonyms":[{"name":"Spom972h-mrps8","type":"exact"}],"termid":"PR:O74956"}


id: PBO:0086425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative helicase with limited sequence similarity to human Rb protein; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; YLR419W is not an essential gene","termid":"PBO:0086425"}


id: PBO:0062395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 16 pseudogene","termid":"PBO:0062395"}


id: PBO:0067021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 34, pseudogene","termid":"PBO:0067021"}


id: GO:0003947
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-D-galactosamine + (N-acetylneuraminyl)-D-galactosyl-D-glucosylceramide = UDP + N-acetyl-D-galactosaminyl-(N-acetylneuraminyl)-D-galactosyl-D-glucosylceramide.","definition_xrefs":["EC:2.4.1.92"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylgalactosaminyltransferase activity","termid":"GO:0008376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"(N-acetylneuraminyl)-galactosylglucosylceramide N-acetylgalactosaminyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.92-RXN","RHEA:12588","Reactome:R-HSA-8856223"],"synonyms":[{"name":"GM2 synthase activity","type":"related"},{"name":"GM2/GD2-synthase activity","type":"related"},{"name":"GalNAc-T activity","type":"related"},{"name":"UDP acetylgalactosamine-(N-acetylneuraminyl)-D-galactosyl-D-glucosylceramide acetylgalactosaminyltransferase activity","type":"related"},{"name":"UDP-N-acetyl-D-galactosamine:(N-acetylneuraminyl)-D-galactosyl-D-glucosylceramide N-acetyl-D-galactosaminyltransferase activity","type":"related"},{"name":"UDP-N-acetyl-D-galactosamine:1-O-[O-(N-acetyl-alpha-neuraminosyl)-(2->3)-O-beta-D-galactopyranosyl-(1->4)-beta-D-glucopyranosyl]-ceramide 1,4-beta-N-acetyl-D-galactosaminyltransferase activity","type":"related"},{"name":"UDP-N-acetylgalactosamine GM3 N-acetylgalactosaminyltransferase activity","type":"related"},{"name":"asialo-GM2 synthase activity","type":"related"},{"name":"beta-1,4N-aetylgalactosaminyltransferase activity","type":"related"},{"name":"ganglioside GM2 synthase activity","type":"related"},{"name":"ganglioside GM3 acetylgalactosaminyltransferase activity","type":"related"},{"name":"uridine diphosphoacetylgalactosamine-acetylneuraminylgalactosylglucosylceramide acetylgalactosaminyltransferase activity","type":"related"},{"name":"uridine diphosphoacetylgalactosamine-ganglioside GM3 acetylgalactosaminyltransferase activity","type":"related"},{"name":"uridine diphosphoacetylgalactosamine-hematoside acetylgalactosaminyltransferase activity","type":"related"}],"termid":"GO:0003947"}


id: PBO:0077724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trinucleotide repeat containing adaptor 6B","termid":"PBO:0077724"}


id: PBO:0044420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 3 subfamily A member 4","termid":"PBO:0044420"}


id: PBO:0036252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-glutamyl phosphate reductase Pro1","termid":"PBO:0036252"}


id: PBO:0066774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 72","termid":"PBO:0066774"}


id: FYPO:0001237
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing cadmium ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0002057","FYPO:0000139","FYPO:0002058","FYPO:0002060","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on cadmium","synonyms":[{"name":"normal cell population growth in presence of cadmium","type":"exact"},{"name":"normal cell population growth on cadmium","type":"exact"},{"name":"normal cell population growth on cadmium ion","type":"exact"},{"name":"normal cellular response to cadmium","type":"related"},{"name":"normal growth on cadmium ions","type":"exact"},{"name":"normal vegetative cell population growth on cadmium","type":"exact"}],"termid":"FYPO:0001237"}


id: PBO:0001392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial glycerol dehydrogenase Gld1","termid":"PBO:0001392"}


id: GO:1900860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of brevianamide F biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of brevianamide F biosynthetic process (obsolete GO:1900860)","synonyms":[{"name":"up regulation of brevianamide F biosynthetic process","type":"exact"},{"name":"up-regulation of brevianamide F biosynthetic process","type":"exact"},{"name":"upregulation of brevianamide F biosynthetic process","type":"exact"}],"termid":"GO:1900860"}


id: GO:0034225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Modulation of the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a stimulus indicating the organism is deprived of zinc ions.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter in response to zinc ion starvation (obsolete GO:0034225)","synonyms":[{"name":"regulation of transcription from RNA polymerase II promoter in response to zinc deficiency","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter in response to zinc ion limitation","type":"exact"}],"termid":"GO:0034225"}


id: GO:0040005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Attaching of a chitin-containing cuticle to the epithelium underlying it. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:bf","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molting cycle process","termid":"GO:0022404"},{"relation_name":"part_of","term_name":"molting cycle, chitin-based cuticle","termid":"GO:0007591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chitin-based cuticle attachment to epithelium","synonyms":[{"name":"cuticular attachment to epithelium","type":"broad"}],"termid":"GO:0040005"}


id: PBO:0056980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 29c","termid":"PBO:0056980"}


id: PBO:0068493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 77, pseudogene","termid":"PBO:0068493"}


id: MONDO:0029811
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete laminopathy with peripheral neuropathy (obsolete MONDO:0029811)","secondary_identifiers":["Orphanet:300758"],"termid":"MONDO:0029811","xrefs":{"Monarch":{"xref_id":"0029811"}}}


id: PBO:0056541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCF.2 cell line derived transforming sequence like","termid":"PBO:0056541"}


id: PR:Q9USK8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ags1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USK8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall alpha-1,3-glucan synthase ags1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1281.01","synonyms":[{"name":"Spom972h-ags1","type":"exact"},{"name":"cell wall alpha-1,4-glucan synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USK8"}


id: GO:0072542
data:
  {"annotated_genes":["SJAG_04638","SJAG_00078","SJAG_01142","SJAG_01270","SJAG_00369","SJAG_03681","SJAG_00526","SJAG_00095","SJAG_03353","SJAG_04968"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74370,76467,78251,80630,94743,99515,116843,119814],"is_not":false,"summary":null,"term":"GO:0072542"},{"annotations":[73453,77574],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008160"}]},"cv_name":"molecular_function","definition":"Binds to and increases the activity of a protein phosphatase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activator activity","termid":"GO:0019211"},{"relation_name":"is_a","term_name":"protein phosphatase regulator activity","termid":"GO:0019888"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00078":null,"SJAG_00095":null,"SJAG_00369":null,"SJAG_00526":null,"SJAG_01142":null,"SJAG_01270":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04638":null,"SJAG_04968":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0003674","GO:0030234","GO:0098772","GO:0140677"],"is_obsolete":false,"name":"protein phosphatase activator activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0072543","GO:0071862"],"synonyms":[{"name":"protein phosphatase 2 activator activity","type":"narrow"},{"name":"protein phosphatase type 1 activator activity","type":"narrow"},{"name":"protein phosphatase type 2A activator activity","type":"narrow"}],"termid":"GO:0072542","terms_by_termid":{"GO:0008160":null,"GO:0072542":null}}


id: PBO:0065781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"QRSL1 pseudogene 1","termid":"PBO:0065781"}


id: PBO:0084090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Guanine nucleotide exchange factor (GEF) and ubiquitin receptor; involved in vesicle-mediated vacuolar transport, including Golgi-endosome trafficking and sorting through the multivesicular body (MVB); stimulates the intrinsic guanine nucleotide exchange activity of Rab family members (Vps21p/Ypt52p/Ypt53p); partially redundant with GEF MUK1; required for localization of the CORVET complex to endosomes; similar to mammalian ras inhibitors; contains a Ub-interacting CUE domain","termid":"PBO:0084090"}


id: PBO:0113160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HSP70 family ATP-binding protein; role in protein folding and vacuolar protein import; required for Ub-dependent degradation of short-lived proteins; associated with the chaperonin-containing T-complex; unique specificity in propagation of [URE3] prions and vacuolar degradation of gluconeogenic enzymes; contributes to tRNA nuclear import during starvation; targeted to vacuoles via the AP-3 pathway; localizes to exosomes during heat stress with a role in thermotolerance; 98% identity with Ssa1p","termid":"PBO:0113160"}


id: GO:0097379
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the migration of an axon growth cone of a dorsal spinal cord interneuron is directed to a specific target site in the posterior direction along the anterior-posterior body axis in response to a combination of attractive and repulsive cues. The anterior-posterior axis is defined by a line that runs from the head or mouth of an organism to the tail or opposite end of the organism.","definition_xrefs":["GOC:yaf","PMID:19545367"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior/posterior axon guidance","termid":"GO:0033564"},{"relation_name":"is_a","term_name":"dorsal spinal cord interneuron axon guidance","termid":"GO:0097378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal spinal cord interneuron posterior axon guidance","synonyms":[{"name":"dorsal interneuron caudal axon projection","type":"related"}],"termid":"GO:0097379"}


id: MONDO:0010663
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of X-linked syndromes characterized by severe intellectual deficit and facial dysmorphism, with variable other features.","definition_xrefs":["Orphanet:73220"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATR-X-related syndrome","termid":"MONDO:0016980"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability-hypotonic facies syndrome, X-linked, 1","secondary_identifiers":["Orphanet:93971","Orphanet:93974","MESH:C537445","Orphanet:93973","SCTID:717763008","OMIM:309580","Orphanet:93970","Orphanet:93972","UMLS:C4759781","DOID:0080982","GARD:3521","SCTID:719212004","MEDGEN:1676827"],"synonyms":[{"name":"Carpenter-Waziri syndrome","type":"exact"},{"name":"Chudley Lowry Hoar syndrome","type":"exact"},{"name":"Chudley intellectual disability syndrome","type":"related"},{"name":"Chudley mental retardation syndrome","type":"related"},{"name":"Chudley syndrome 1","type":"related"},{"name":"Chudley-Lowry syndrome","type":"exact"},{"name":"Chudley-Lowry-Hoar syndrome","type":"exact"},{"name":"Holmes-Gang syndrome","type":"exact"},{"name":"JMS","type":"related"},{"name":"Juberg Marsidi syndrome","type":"narrow"},{"name":"Juberg-Marsidi mental retardation syndrome","type":"narrow"},{"name":"Juberg-Marsidi syndrome","type":"narrow"},{"name":"MRXHF1","type":"exact"},{"name":"SFM1","type":"related"},{"name":"SFMS","type":"exact"},{"name":"Smith Fineman Myers syndrome 1","type":"related"},{"name":"Smith-Fineman-Myers syndrome","type":"exact"},{"name":"X-linked hypogonadism gynecomastia intellectual disability","type":"related"},{"name":"X-linked hypogonadism gynecomastia mental retardation","type":"related"},{"name":"X-linked intellectual disability-hypotonic face syndrome","type":"exact"},{"name":"XLMR-hypotonic facies syndrome","type":"exact"},{"name":"intellectual disability Smith Fineman Myers type","type":"related"},{"name":"intellectual disability, X-linked, with growth retardation, deafness, and microgenitalism","type":"related"},{"name":"intellectual disability-hypotonic facies syndrome X-linked, 1","type":"related"},{"name":"intellectual disability-hypotonic facies syndrome, X-linked, 1","type":"exact"},{"name":"intellectual disability-hypotonic facies syndrome, X-linked, type 1","type":"exact"},{"name":"mental retardation Smith Fineman Myers type","type":"related"},{"name":"mental retardation, X-linked, with growth retardation, deafness, and microgenitalism","type":"related"},{"name":"mental retardation-hypotonic facies syndrome X-linked, 1","type":"related"},{"name":"mental retardation-hypotonic facies syndrome, X-linked, 1","type":"related"},{"name":"mental retardation-hypotonic facies syndrome, X-linked, X-linked recessive","type":"exact"},{"name":"mental retardation-hypotonic facies syndrome, X-linked, type 1","type":"exact"},{"name":"mental retradation, X-linked with Growth delay, deafness, microgenitalism","type":"related"}],"termid":"MONDO:0010663","xrefs":{"Monarch":{"xref_id":"0010663"}}}


id: PBO:0116391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protein folding chaperone Hsp60/Mcp60","termid":"PBO:0116391"}


id: GO:0005509
data:
  {"annotated_genes":["SJAG_03088","SJAG_03044","SJAG_04466","SJAG_00803","SJAG_02435","SJAG_01665","SJAG_00832","SJAG_02694","SJAG_03643","SJAG_01686","SJAG_02532","SJAG_01400","SJAG_03496","SJAG_02215","SJAG_04886","SJAG_04789","SJAG_03032","SJAG_01626","SJAG_01858","SJAG_04013","SJAG_00096","SJAG_01029","SJAG_03850","SJAG_03793","SJAG_04238","SJAG_02786","SJAG_03930","SJAG_00612","SJAG_04621","SJAG_00063","SJAG_04571","SJAG_02019","SJAG_02511","SJAG_00228","SJAG_04781","SJAG_00296","SJAG_04901","SJAG_00724","SJAG_00032","SJAG_04051","SJAG_00751","SJAG_01929","SJAG_01149","SJAG_00719","SJAG_04080","SJAG_03465","SJAG_04859","SJAG_01760","SJAG_00321","SJAG_00485"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[59312,59340,59562,59739,60039,60343,60496,60542,60672,60677,60928,61355,61953,62159,64868,67176,67846,68177,68878,69277,69466,70737,70886,70953,74222,75849,76704,80004,80366,80797,81024,91431,98115,103453,104681,105448,107119,107956,108312,109901,110137,110512,112883,114171,115627,118863,119391,119502,120069,120750],"is_not":false,"summary":null,"term":"GO:0005509"}]},"cv_name":"molecular_function","definition":"Binding to a calcium ion (Ca2+).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion binding","termid":"GO:0046872"}],"gene_count":50,"genes_by_uniquename":{"SJAG_00032":null,"SJAG_00063":null,"SJAG_00096":null,"SJAG_00228":null,"SJAG_00296":null,"SJAG_00321":null,"SJAG_00485":null,"SJAG_00612":null,"SJAG_00719":null,"SJAG_00724":null,"SJAG_00751":null,"SJAG_00803":null,"SJAG_00832":null,"SJAG_01029":null,"SJAG_01149":null,"SJAG_01400":null,"SJAG_01626":null,"SJAG_01665":null,"SJAG_01686":null,"SJAG_01760":null,"SJAG_01858":null,"SJAG_01929":null,"SJAG_02019":null,"SJAG_02215":null,"SJAG_02435":null,"SJAG_02511":null,"SJAG_02532":null,"SJAG_02694":null,"SJAG_02786":null,"SJAG_03032":null,"SJAG_03044":null,"SJAG_03088":null,"SJAG_03465":null,"SJAG_03496":null,"SJAG_03643":null,"SJAG_03793":null,"SJAG_03850":null,"SJAG_03930":null,"SJAG_04013":null,"SJAG_04051":null,"SJAG_04080":null,"SJAG_04238":null,"SJAG_04466":null,"SJAG_04571":null,"SJAG_04621":null,"SJAG_04781":null,"SJAG_04789":null,"SJAG_04859":null,"SJAG_04886":null,"SJAG_04901":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0046872"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0046872"],"is_obsolete":false,"name":"calcium ion binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"calcium ion storage activity","type":"related"}],"termid":"GO:0005509","terms_by_termid":{"GO:0005509":null}}


id: MONDO:0100158
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A spectrum of presentations resulting from biallelic protein-altering variation in CHRNG. Inactivation of the receptor during early development leads to prenatal hypo-akinesia; subsequent phenotypes are a consequence of this hypo-akinesia and are thought to be dependent upon timing and severity of the anomaly at the neuromuscular junction. A range of phenotypes varying in severity (including both lethal and non-lethal presentations) have been reported, but typically include joint contractures, pterygia, dysmorphic features, vertebral and thoracic anomalies, and additional variable abnormalities. There are no clear genotype-phenotype correlations between the lethal and non-lethal presentations of this spectrum; both inter- and intra-familial variability have been reported, with the same variants being observed in both lethal and non-lethal cases.","definition_xrefs":["PMID:16826520","PMID:30868735","PMID:22167768","PMID:16826531"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple pterygium syndrome","termid":"MONDO:0017415"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHRNG-associated hypo-akinesia disorder of prenatal onset","termid":"MONDO:0100158","xrefs":{"Monarch":{"xref_id":"0100158"}}}


id: PBO:0087069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L34A; homologous to mammalian ribosomal protein L34, no bacterial homolog; RPL34A has a paralog, RPL34B, that arose from the whole genome duplication","termid":"PBO:0087069"}


id: PBO:0041646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CACNA2D1 antisense RNA 1","termid":"PBO:0041646"}


id: PBO:0072891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"strawberry notch homolog 2","termid":"PBO:0072891"}


id: PR:Q9UUM2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- swi1 gene.","definition_xrefs":["UniProtKB:Q9UUM2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating-type switching protein swi1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC216.06c","synonyms":[{"name":"Spom972h-swi1","type":"exact"},{"name":"replication fork protection complex subunit swi1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UUM2"}


id: MONDO:0014470
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant nonsyndromic deafness in which the cause of the disease is a mutation in the TBC1D24 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0019497"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 65","secondary_identifiers":["OMIM:616044","DOID:0110586","MEDGEN:856147","UMLS:C3892048","GARD:18140"],"synonyms":[{"name":"DFNA65","type":"narrow"},{"name":"TBC1D24 autosomal dominant nonsyndromic deafness","type":"narrow"},{"name":"autosomal dominant deafness 65","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 65","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness caused by mutation in TBC1D24","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 65","type":"narrow"},{"name":"deafness, autosomal dominant 65","type":"narrow"},{"name":"deafness, autosomal dominant type 65","type":"narrow"}],"termid":"MONDO:0014470","xrefs":{"Monarch":{"xref_id":"0014470"}}}


id: GO:0000434
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involving galactose that stops, prevents or reduces the rate of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon catabolite repression of transcription by galactose","termid":"GO:0000410"},{"relation_name":"is_a","term_name":"regulation of transcription from RNA polymerase II promoter by galactose","termid":"GO:0000431"},{"relation_name":"is_a","term_name":"carbon catabolite repression of transcription from RNA polymerase II promoter","termid":"GO:0000437"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"negatively_regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0006355","GO:0008150","GO:0010467","GO:0006351"],"is_obsolete":false,"name":"carbon catabolite repression of transcription from RNA polymerase II promoter by galactose","synonyms":[{"name":"down regulation of transcription from RNA polymerase II promoter by galactose","type":"exact"},{"name":"down-regulation of transcription from RNA polymerase II promoter by galactose","type":"exact"},{"name":"downregulation of transcription from RNA polymerase II promoter by galactose","type":"exact"},{"name":"inhibition of transcription from RNA polymerase II promoter by galactose","type":"narrow"}],"termid":"GO:0000434"}


id: PBO:0046466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoplasmic reticulum aminopeptidase 2","termid":"PBO:0046466"}


id: PBO:0057609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 942","termid":"PBO:0057609"}


id: PBO:0082935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic ATPase that is a ribosome-associated molecular chaperone; functions with J-protein partner Zuo1p; may be involved in the folding of newly-synthesized polypeptide chains; member of the HSP70 family; SSB2 has a paralog, SSB1, that arose from the whole genome duplication","termid":"PBO:0082935"}


id: PBO:0057847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3159","termid":"PBO:0057847"}


id: GO:0043274
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a phospholipase.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"phospholipase binding","termid":"GO:0043274"}


id: GO:0047810
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-alanine + 2-oxoglutarate = pyruvate + D-glutamate.","definition_xrefs":["EC:2.6.1.21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016769","GO:0016740"],"is_obsolete":false,"name":"D-alanine-2-oxoglutarate aminotransferase activity","secondary_identifiers":["MetaCyc:D-ALANINE-AMINOTRANSFERASE-RXN","RHEA:15869"],"synonyms":[{"name":"D-alanine aminotransferase activity","type":"exact"},{"name":"D-alanine transaminase activity","type":"broad"},{"name":"D-alanine-D-glutamate transaminase activity","type":"related"},{"name":"D-amino acid aminotransferase activity","type":"broad"},{"name":"D-amino acid transaminase activity","type":"broad"},{"name":"D-amino-acid transaminase activity","type":"broad"},{"name":"D-aspartate aminotransferase activity","type":"related"},{"name":"D-aspartate transaminase activity","type":"related"},{"name":"D-aspartic aminotransferase activity","type":"related"}],"termid":"GO:0047810"}


id: FYPO:0007515
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which RNA stability is decreased during a cellular response to oxidative stress. RNA molecules are more likely to degrade over a given time period than in wild type. Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah","PMID:14633985"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA stability","termid":"FYPO:0003038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased RNA stability during cellular response to oxidative stress","synonyms":[{"name":"decreased RNA stability during cellular response to oxidative stress during mitotic cell cycle","type":"related"},{"name":"decreased RNA stability during cellular response to oxidative stress during vegetative growth","type":"exact"},{"name":"decreased RNA stability in response to oxidative stress","type":"exact"},{"name":"reduced RNA stability during cellular response to oxidative stress","type":"exact"}],"termid":"FYPO:0007515"}


id: GO:0032678
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-9 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-9 production","termid":"GO:0032638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of interleukin-9 production","secondary_identifiers":["GO:0045417"],"synonyms":[{"name":"regulation of IL-9 production","type":"exact"},{"name":"regulation of interleukin-9 biosynthetic process","type":"narrow"}],"termid":"GO:0032678"}


id: PBO:0060318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myomaker, myoblast fusion factor","termid":"PBO:0060318"}


id: PBO:0065489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome activator subunit 3 interacting protein 1","termid":"PBO:0065489"}


id: GO:1904273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed import of L-alanine from the extracellular region across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:TermGenie","GOC:kmv","GO_REF:0000075","PMID:21097500"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid import across plasma membrane","termid":"GO:0089718"},{"relation_name":"is_a","term_name":"L-alanine transmembrane transport","termid":"GO:1904557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"L-alanine import across plasma membrane","termid":"GO:1904273"}


id: GO:0039575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host TYK2 (tyrosine kinase 2) activity by stopping, preventing or reducing phosphorylation and thereby activation of TYK2.","definition_xrefs":["PMID:10523853","PMID:19254804","PMID:16987978"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host TYK2 activity by negative regulation of TYK2 tyrosine phosphorylation (obsolete GO:0039575)","synonyms":[{"name":"inhibition by virus of host TYK2 activation","type":"broad"},{"name":"inhibition by virus of host TYK2 phosphorylation","type":"exact"}],"termid":"GO:0039575"}


id: PBO:0047261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 242 member D","termid":"PBO:0047261"}


id: PBO:0041126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB domain containing 7 pseudogene 2","termid":"PBO:0041126"}


id: MONDO:0014249
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mammary polyadenomatosis is characterized by the presence in both breasts of multiple voluminous fibroadenomas with heterogeneous echo patterns.","definition_xrefs":["Orphanet:50920"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast benign neoplasm","termid":"MONDO:0000620"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple fibroadenoma of the breast","secondary_identifiers":["OMIM:615554","MEDGEN:816248","UMLS:C3809918"],"synonyms":[{"name":"MFAB","type":"related"},{"name":"mammary polyadenomatosis","type":"exact"},{"name":"multiple fibroadenomas of the breast","type":"related"}],"termid":"MONDO:0014249","xrefs":{"Monarch":{"xref_id":"0014249"}}}


id: GO:0052313
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism modulates the frequency, rate or extent of the release of nutrients from a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of nutrient release from other organism involved in symbiotic interaction (obsolete GO:0052313)","synonyms":[{"name":"modulation of nutrient release from other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052313"}


id: MOD:00924
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-lysine residue and an L-threonine residue by an isopeptide bond to form N6-(L-threonyl)-L-lysine.","definition_xrefs":["RESID:AA0440","PubMed:18063774"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isopeptide crosslinked residues","termid":"MOD:00688"},{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"},{"relation_name":"is_a","term_name":"crosslinked L-lysine residue","termid":"MOD:02051"},{"relation_name":"is_a","term_name":"crosslinked L-threonine residue","termid":"MOD:02056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"N6-(L-threonyl)-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-([(2S,3R)-2-amino-3-hydroxybutanoyl]amino)hexanoic acid","type":"exact"},{"name":"N6-(L-threonyl)-L-lysine","type":"exact"},{"name":"N6-threonyl-lysine","type":"exact"}],"termid":"MOD:00924"}


id: GO:0002777
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of an antimicrobial peptide. Such peptides may have protective properties against bacteria, fungi, viruses, or protozoa.","definition_xrefs":["PMID:11807545","PMID:15638771","ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide biosynthetic process","termid":"GO:0043043"},{"relation_name":"part_of","term_name":"antimicrobial peptide production","termid":"GO:0002775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"antimicrobial peptide biosynthetic process","termid":"GO:0002777"}


id: GO:0002134
data:
  {"annotated_genes":["SJAG_03453","SJAG_02370"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92671,93496],"is_not":false,"summary":null,"term":"GO:0002134"}]},"cv_name":"molecular_function","definition":"Binding to UTP, uridine 5'-triphosphate.","definition_xrefs":["ISBN:0198506732","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide binding","termid":"GO:0032557"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02370":null,"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"UTP binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0002134","terms_by_termid":{"GO:0002134":null}}


id: PBO:0064015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 49","termid":"PBO:0064015"}


id: GO:1902537
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A pinocytosis which involves another organism.","definition_xrefs":["GOC:jl","GOC:TermGenie","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism pinocytosis (obsolete GO:1902537)","termid":"GO:1902537"}


id: GO:0060261
data:
  {"annotated_genes":["SJAG_01403","SJAG_02494","SJAG_01771","SJAG_03421","SJAG_00766","SJAG_03573","SJAG_03622","SJAG_00904","SJAG_04705","SJAG_01952","SJAG_04099","SJAG_05341","SJAG_03590","SJAG_02849","SJAG_00150","SJAG_04647","SJAG_04820","SJAG_00909","SJAG_00342","SJAG_00297","SJAG_05203","SJAG_02551","SJAG_02391"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65407,89261,92181,92492,96149,96264,97198,97680,100489,100840,103776,105235,105494,107523,107878,108067,108204,110565,110592,116592,120814],"is_not":false,"summary":null,"term":"GO:0060261"},{"annotations":[81314,91526],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045899"}]},"cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of a process involved in starting transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:tb","GOC:dph","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transcription by RNA polymerase II","termid":"GO:0045944"},{"relation_name":"is_a","term_name":"regulation of transcription initiation by RNA polymerase II","termid":"GO:0060260"},{"relation_name":"is_a","term_name":"positive regulation of DNA-templated transcription initiation","termid":"GO:2000144"},{"relation_name":"positively_regulates","term_name":"transcription initiation at RNA polymerase II promoter","termid":"GO:0006367"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00150":null,"SJAG_00297":null,"SJAG_00342":null,"SJAG_00766":null,"SJAG_00904":null,"SJAG_00909":null,"SJAG_01403":null,"SJAG_01771":null,"SJAG_01952":null,"SJAG_02391":null,"SJAG_02494":null,"SJAG_02551":null,"SJAG_02849":null,"SJAG_03421":null,"SJAG_03573":null,"SJAG_03590":null,"SJAG_03622":null,"SJAG_04099":null,"SJAG_04647":null,"SJAG_04705":null,"SJAG_04820":null,"SJAG_05203":null,"SJAG_05341":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006355","GO:0006351","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of transcription initiation by RNA polymerase II","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"positive regulation of transcription initiation from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0060261","terms_by_termid":{"GO:0045899":null,"GO:0060261":null}}


id: PBO:0058354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4727","termid":"PBO:0058354"}


id: GO:1904747
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of apoptotic process involved in development.","definition_xrefs":["GOC:TermGenie","PMID:22801495","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of apoptotic process","termid":"GO:0043065"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of apoptotic process involved in development","termid":"GO:1904748"},{"relation_name":"positively_regulates","term_name":"apoptotic process involved in development","termid":"GO:1902742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of apoptotic process involved in development","synonyms":[{"name":"activation of activation of apoptosis involved in anatomical structure development","type":"narrow"},{"name":"activation of activation of apoptosis involved in development of an anatomical structure","type":"narrow"},{"name":"activation of apoptosis activator activity involved in anatomical structure development","type":"related"},{"name":"activation of apoptosis activator activity involved in development of an anatomical structure","type":"related"},{"name":"activation of apoptosis involved in anatomical structure development","type":"narrow"},{"name":"activation of apoptosis involved in development of an anatomical structure","type":"narrow"},{"name":"activation of apoptosis signaling involved in anatomical structure development","type":"narrow"},{"name":"activation of apoptosis signaling involved in development of an anatomical structure","type":"narrow"},{"name":"activation of apoptotic cell death involved in anatomical structure development","type":"narrow"},{"name":"activation of apoptotic cell death involved in development of an anatomical structure","type":"narrow"},{"name":"activation of apoptotic process involved in anatomical structure development","type":"narrow"},{"name":"activation of apoptotic process involved in development","type":"narrow"},{"name":"activation of apoptotic process involved in development of an anatomical structure","type":"narrow"},{"name":"activation of apoptotic program involved in anatomical structure development","type":"narrow"},{"name":"activation of apoptotic program involved in development of an anatomical structure","type":"narrow"},{"name":"activation of apoptotic programmed cell death involved in anatomical structure development","type":"narrow"},{"name":"activation of apoptotic programmed cell death involved in development of an anatomical structure","type":"narrow"},{"name":"activation of commitment to apoptosis involved in anatomical structure development","type":"related"},{"name":"activation of commitment to apoptosis involved in development of an anatomical structure","type":"related"},{"name":"activation of induction of apoptosis by p53 involved in anatomical structure development","type":"related"},{"name":"activation of induction of apoptosis by p53 involved in development of an anatomical structure","type":"related"},{"name":"activation of induction of apoptosis involved in anatomical structure development","type":"related"},{"name":"activation of induction of apoptosis involved in development of an anatomical structure","type":"related"},{"name":"activation of programmed cell death by apoptosis involved in anatomical structure development","type":"narrow"},{"name":"activation of programmed cell death by apoptosis involved in development of an anatomical structure","type":"narrow"},{"name":"activation of signaling (initiator) caspase activity involved in anatomical structure development","type":"related"},{"name":"activation of signaling (initiator) caspase activity involved in development of an anatomical structure","type":"related"},{"name":"activation of type I programmed cell death involved in anatomical structure development","type":"narrow"},{"name":"activation of type I programmed cell death involved in development of an anatomical structure","type":"narrow"},{"name":"positive regulation of activation of apoptosis involved in anatomical structure development","type":"narrow"},{"name":"positive regulation of activation of apoptosis involved in development of an anatomical structure","type":"narrow"},{"name":"positive regulation of apoptosis activator activity involved in anatomical structure development","type":"related"},{"name":"positive regulation of apoptosis activator activity involved in development of an anatomical structure","type":"related"},{"name":"positive regulation of apoptosis involved in anatomical structure development","type":"narrow"},{"name":"positive regulation of apoptosis involved in development of an anatomical structure","type":"narrow"},{"name":"positive regulation of apoptosis signaling involved in anatomical structure development","type":"narrow"},{"name":"positive regulation of apoptosis signaling involved in development of an anatomical structure","type":"narrow"},{"name":"positive regulation of apoptotic cell death involved in anatomical structure development","type":"exact"},{"name":"positive regulation of apoptotic cell death involved in development of an anatomical structure","type":"exact"},{"name":"positive regulation of apoptotic process involved in anatomical structure development","type":"exact"},{"name":"positive regulation of apoptotic process involved in development of an anatomical structure","type":"exact"},{"name":"positive regulation of apoptotic program involved in anatomical structure development","type":"narrow"},{"name":"positive regulation of apoptotic program involved in development of an anatomical structure","type":"narrow"},{"name":"positive regulation of apoptotic programmed cell death involved in anatomical structure development","type":"exact"},{"name":"positive regulation of apoptotic programmed cell death involved in development of an anatomical structure","type":"exact"},{"name":"positive regulation of commitment to apoptosis involved in anatomical structure development","type":"related"},{"name":"positive regulation of commitment to apoptosis involved in development of an anatomical structure","type":"related"},{"name":"positive regulation of induction of apoptosis by p53 involved in anatomical structure development","type":"related"},{"name":"positive regulation of induction of apoptosis by p53 involved in development of an anatomical structure","type":"related"},{"name":"positive regulation of induction of apoptosis involved in anatomical structure development","type":"related"},{"name":"positive regulation of induction of apoptosis involved in development of an anatomical structure","type":"related"},{"name":"positive regulation of programmed cell death by apoptosis involved in anatomical structure development","type":"exact"},{"name":"positive regulation of programmed cell death by apoptosis involved in development of an anatomical structure","type":"exact"},{"name":"positive regulation of signaling (initiator) caspase activity involved in anatomical structure development","type":"related"},{"name":"positive regulation of signaling (initiator) caspase activity involved in development of an anatomical structure","type":"related"},{"name":"positive regulation of type I programmed cell death involved in anatomical structure development","type":"narrow"},{"name":"positive regulation of type I programmed cell death involved in development of an anatomical structure","type":"narrow"},{"name":"up regulation of activation of apoptosis involved in anatomical structure development","type":"narrow"},{"name":"up regulation of activation of apoptosis involved in development of an anatomical structure","type":"narrow"},{"name":"up regulation of apoptosis activator activity involved in anatomical structure development","type":"related"},{"name":"up regulation of apoptosis activator activity involved in development of an anatomical structure","type":"related"},{"name":"up regulation of apoptosis involved in anatomical structure development","type":"narrow"},{"name":"up regulation of apoptosis involved in development of an anatomical structure","type":"narrow"},{"name":"up regulation of apoptosis signaling involved in anatomical structure development","type":"narrow"},{"name":"up regulation of apoptosis signaling involved in development of an anatomical structure","type":"narrow"},{"name":"up regulation of apoptotic cell death involved in anatomical structure development","type":"exact"},{"name":"up regulation of apoptotic cell death involved in development of an anatomical structure","type":"exact"},{"name":"up regulation of apoptotic process involved in anatomical structure development","type":"exact"},{"name":"up regulation of apoptotic process involved in development","type":"exact"},{"name":"up regulation of apoptotic process involved in development of an anatomical structure","type":"exact"},{"name":"up regulation of apoptotic program involved in anatomical structure development","type":"narrow"},{"name":"up regulation of apoptotic program involved in development of an anatomical structure","type":"narrow"},{"name":"up regulation of apoptotic programmed cell death involved in anatomical structure development","type":"exact"},{"name":"up regulation of apoptotic programmed cell death involved in development of an anatomical structure","type":"exact"},{"name":"up regulation of commitment to apoptosis involved in anatomical structure development","type":"related"},{"name":"up regulation of commitment to apoptosis involved in development of an anatomical structure","type":"related"},{"name":"up regulation of induction of apoptosis by p53 involved in anatomical structure development","type":"related"},{"name":"up regulation of induction of apoptosis by p53 involved in development of an anatomical structure","type":"related"},{"name":"up regulation of induction of apoptosis involved in anatomical structure development","type":"related"},{"name":"up regulation of induction of apoptosis involved in development of an anatomical structure","type":"related"},{"name":"up regulation of programmed cell death by apoptosis involved in anatomical structure development","type":"exact"},{"name":"up regulation of programmed cell death by apoptosis involved in development of an anatomical structure","type":"exact"},{"name":"up regulation of signaling (initiator) caspase activity involved in anatomical structure development","type":"related"},{"name":"up regulation of signaling (initiator) caspase activity involved in development of an anatomical structure","type":"related"},{"name":"up regulation of type I programmed cell death involved in anatomical structure development","type":"narrow"},{"name":"up regulation of type I programmed cell death involved in development of an anatomical structure","type":"narrow"},{"name":"up-regulation of activation of apoptosis involved in anatomical structure development","type":"narrow"},{"name":"up-regulation of activation of apoptosis involved in development of an anatomical structure","type":"narrow"},{"name":"up-regulation of apoptosis activator activity involved in anatomical structure development","type":"related"},{"name":"up-regulation of apoptosis activator activity involved in development of an anatomical structure","type":"related"},{"name":"up-regulation of apoptosis involved in anatomical structure development","type":"narrow"},{"name":"up-regulation of apoptosis involved in development of an anatomical structure","type":"narrow"},{"name":"up-regulation of apoptosis signaling involved in anatomical structure development","type":"narrow"},{"name":"up-regulation of apoptosis signaling involved in development of an anatomical structure","type":"narrow"},{"name":"up-regulation of apoptotic cell death involved in anatomical structure development","type":"exact"},{"name":"up-regulation of apoptotic cell death involved in development of an anatomical structure","type":"exact"},{"name":"up-regulation of apoptotic process involved in anatomical structure development","type":"exact"},{"name":"up-regulation of apoptotic process involved in development","type":"exact"},{"name":"up-regulation of apoptotic process involved in development of an anatomical structure","type":"exact"},{"name":"up-regulation of apoptotic program involved in anatomical structure development","type":"narrow"},{"name":"up-regulation of apoptotic program involved in development of an anatomical structure","type":"narrow"},{"name":"up-regulation of apoptotic programmed cell death involved in anatomical structure development","type":"exact"},{"name":"up-regulation of apoptotic programmed cell death involved in development of an anatomical structure","type":"exact"},{"name":"up-regulation of commitment to apoptosis involved in anatomical structure development","type":"related"},{"name":"up-regulation of commitment to apoptosis involved in development of an anatomical structure","type":"related"},{"name":"up-regulation of induction of apoptosis by p53 involved in anatomical structure development","type":"related"},{"name":"up-regulation of induction of apoptosis by p53 involved in development of an anatomical structure","type":"related"},{"name":"up-regulation of induction of apoptosis involved in anatomical structure development","type":"related"},{"name":"up-regulation of induction of apoptosis involved in development of an anatomical structure","type":"related"},{"name":"up-regulation of programmed cell death by apoptosis involved in anatomical structure development","type":"exact"},{"name":"up-regulation of programmed cell death by apoptosis involved in development of an anatomical structure","type":"exact"},{"name":"up-regulation of signaling (initiator) caspase activity involved in anatomical structure development","type":"related"},{"name":"up-regulation of signaling (initiator) caspase activity involved in development of an anatomical structure","type":"related"},{"name":"up-regulation of type I programmed cell death involved in anatomical structure development","type":"narrow"},{"name":"up-regulation of type I programmed cell death involved in development of an anatomical structure","type":"narrow"},{"name":"upregulation of activation of apoptosis involved in anatomical structure development","type":"narrow"},{"name":"upregulation of activation of apoptosis involved in development of an anatomical structure","type":"narrow"},{"name":"upregulation of apoptosis activator activity involved in anatomical structure development","type":"related"},{"name":"upregulation of apoptosis activator activity involved in development of an anatomical structure","type":"related"},{"name":"upregulation of apoptosis involved in anatomical structure development","type":"narrow"},{"name":"upregulation of apoptosis involved in development of an anatomical structure","type":"narrow"},{"name":"upregulation of apoptosis signaling involved in anatomical structure development","type":"narrow"},{"name":"upregulation of apoptosis signaling involved in development of an anatomical structure","type":"narrow"},{"name":"upregulation of apoptotic cell death involved in anatomical structure development","type":"exact"},{"name":"upregulation of apoptotic cell death involved in development of an anatomical structure","type":"exact"},{"name":"upregulation of apoptotic process involved in anatomical structure development","type":"exact"},{"name":"upregulation of apoptotic process involved in development","type":"exact"},{"name":"upregulation of apoptotic process involved in development of an anatomical structure","type":"exact"},{"name":"upregulation of apoptotic program involved in anatomical structure development","type":"narrow"},{"name":"upregulation of apoptotic program involved in development of an anatomical structure","type":"narrow"},{"name":"upregulation of apoptotic programmed cell death involved in anatomical structure development","type":"exact"},{"name":"upregulation of apoptotic programmed cell death involved in development of an anatomical structure","type":"exact"},{"name":"upregulation of commitment to apoptosis involved in anatomical structure development","type":"related"},{"name":"upregulation of commitment to apoptosis involved in development of an anatomical structure","type":"related"},{"name":"upregulation of induction of apoptosis by p53 involved in anatomical structure development","type":"related"},{"name":"upregulation of induction of apoptosis by p53 involved in development of an anatomical structure","type":"related"},{"name":"upregulation of induction of apoptosis involved in anatomical structure development","type":"related"},{"name":"upregulation of induction of apoptosis involved in development of an anatomical structure","type":"related"},{"name":"upregulation of programmed cell death by apoptosis involved in anatomical structure development","type":"exact"},{"name":"upregulation of programmed cell death by apoptosis involved in development of an anatomical structure","type":"exact"},{"name":"upregulation of signaling (initiator) caspase activity involved in anatomical structure development","type":"related"},{"name":"upregulation of signaling (initiator) caspase activity involved in development of an anatomical structure","type":"related"},{"name":"upregulation of type I programmed cell death involved in anatomical structure development","type":"narrow"},{"name":"upregulation of type I programmed cell death involved in development of an anatomical structure","type":"narrow"}],"termid":"GO:1904747"}


id: PBO:0038850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase with thrombospondin type 1 motif 18","termid":"PBO:0038850"}


id: GO:0042290
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete URM1 hydrolase activity (obsolete GO:0042290)","synonyms":[{"name":"URM1 hydrolase activity","type":"exact"}],"termid":"GO:0042290"}


id: GO:1900214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of apoptotic process involved in metanephric collecting duct development.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:TermGenie","PMID:17314325","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process involved in development","termid":"GO:1904748"},{"relation_name":"regulates","term_name":"apoptotic process involved in metanephric collecting duct development","termid":"GO:1900204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of apoptotic process involved in metanephric collecting duct development","synonyms":[{"name":"regulation of apoptosis of metanephric collecting duct development","type":"narrow"},{"name":"regulation of apoptotic cell death of metanephric collecting duct development","type":"exact"},{"name":"regulation of apoptotic process of metanephric collecting duct development","type":"exact"},{"name":"regulation of apoptotic program of metanephric collecting duct development","type":"narrow"},{"name":"regulation of apoptotic programmed cell death of metanephric collecting duct development","type":"exact"},{"name":"regulation of programmed cell death by apoptosis of metanephric collecting duct development","type":"exact"},{"name":"regulation of signaling (initiator) caspase activity of metanephric collecting duct development","type":"related"},{"name":"regulation of type I programmed cell death of metanephric collecting duct development","type":"narrow"}],"termid":"GO:1900214"}


id: _global:acts_upstream_of_or_within,_negative_effect
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"acts_upstream_of_or_within","termid":"_global:acts_upstream_of_or_within"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acts_upstream_of_or_within,_negative_effect","secondary_identifiers":["RO:0004033"],"termid":"_global:acts_upstream_of_or_within,_negative_effect"}


id: MONDO:0018725
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"corpus callosum agenesis-macrocephaly-hypertelorism syndrome","secondary_identifiers":["UMLS:C5679998","MEDGEN:1801729","Orphanet:459074","GARD:21918"],"synonyms":[{"name":"7q36.3 microduplication syndrome","type":"exact"},{"name":"dup(7)(q36.3)","type":"exact"}],"termid":"MONDO:0018725","xrefs":{"Monarch":{"xref_id":"0018725"}}}


id: MONDO:0100537
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"coagulation protein disease","termid":"MONDO:0002242"},{"relation_name":"is_a","term_name":"inherited blood coagulation disorder","termid":"MONDO:0021181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"plasminogen deficiency, type II","synonyms":[{"name":"plasminogen deficiency, type 2","type":"exact"}],"termid":"MONDO:0100537","xrefs":{"Monarch":{"xref_id":"0100537"}}}


id: PBO:0004377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosylamine-glycine ligase","termid":"PBO:0004377"}


id: PR:000050523
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the dam1 gene in Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DASH complex subunit dam1 (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC589.08c","termid":"PR:000050523"}


id: PBO:0069179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 433, pseudogene","termid":"PBO:0069179"}


id: PBO:0062690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily AB member 1 pseudogene","termid":"PBO:0062690"}


id: GO:0019820
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A subform of peroxisome that corresponds to an intermediate in a peroxisome assembly pathway, which operates by conversion of peroxisomal subforms in the direction P1, P2 -> P3 -> P4 -> P5 -> P6. P2 peroxisomes are distinguished from the other subforms on the bases of buoyant density and protein content; they are the least dense of the subforms observed.","definition_xrefs":["PMID:10629216"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome","termid":"GO:0005777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005777"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005777","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"P2 peroxisome","synonyms":[{"name":"peroxisome vesicle","type":"broad"}],"termid":"GO:0019820"}


id: MONDO:1012379
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"guttural pouch tympany, non-human animal","termid":"MONDO:1011929"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guttural pouch tympany, horse","secondary_identifiers":["OMIA:001408-9796"],"termid":"MONDO:1012379","xrefs":{"Monarch":{"xref_id":"1012379"}}}


id: PATO:0001306
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A temperature which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"temperature","termid":"PATO:0000146"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased temperature","secondary_identifiers":["PATO:0000677"],"synonyms":[{"name":"cold","type":"exact"},{"name":"low temperature","type":"exact"}],"termid":"PATO:0001306"}


id: GO:0045230
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the capsule, a protective structure surrounding some species of bacteria and fungi.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"external encapsulating structure organization","termid":"GO:0045229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"capsule organization","synonyms":[{"name":"capsule organisation","type":"exact"},{"name":"capsule organization and biogenesis","type":"related"}],"termid":"GO:0045230"}


id: PBO:0072522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 51","termid":"PBO:0072522"}


id: PBO:0091348
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human DBR1","termid":"PBO:0091348"}


id: GO:0102741
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,7-dimethylxanthine + S-adenosyl-L-methionine = H+ + caffeine + S-adenosyl-L-homocysteine. Also converts theobromine to caffeine and 7-methylxanthine to theobromine.","definition_xrefs":["EC:2.1.1.160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016741"],"is_obsolete":false,"name":"caffeine synthase activity","synonyms":[{"name":"3N-methyltransferase activity","type":"related"},{"name":"dimethylxanthine methyltransferase activity","type":"related"},{"name":"paraxanthine:S-adenosyl-L-methionine 3-N-methyltransferase activity","type":"narrow"},{"name":"theobromine:S-adenosyl-L-methionine 1-N-methyltransferase activity","type":"narrow"}],"termid":"GO:0102741"}


id: PBO:0040325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit c locus 1","termid":"PBO:0040325"}


id: PBO:0067321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 411, pseudogene","termid":"PBO:0067321"}


id: PBO:0076100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STX5 divergent transcript","termid":"PBO:0076100"}


id: PBO:0047611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formin homology 2 domain containing 3","termid":"PBO:0047611"}


id: PBO:0053583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 606","termid":"PBO:0053583"}


id: MONDO:0700123
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Variants in SMARCC1 cause a novel human syndrome characterized by developmental delay, cerebral ventriculomegaly and aqueductal stenosis, and other associated structural brain and cardiac defects.","direct_ancestors":[{"relation_name":"is_a","term_name":"BAFopathy","termid":"MONDO:0700120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMARCC1-associated developmental dysgenesis syndrome","synonyms":[{"name":"SMARCC1-related BAFopathy","type":"exact"}],"termid":"MONDO:0700123","xrefs":{"Monarch":{"xref_id":"0700123"}}}


id: MONDO:0800215
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multicentric Castleman disease, susceptibility to","secondary_identifiers":["UMLS:C3541461","MEDGEN:762089"],"synonyms":[{"name":"MCD","type":"exact"}],"termid":"MONDO:0800215","xrefs":{"Monarch":{"xref_id":"0800215"}}}


id: FYPO:0002088
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain more exocytic vesicles than normal near the division septum while the cell is undergoing septum assembly.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exocytic vesicles present in increased numbers","termid":"FYPO:0002086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"exocytic vesicles present in increased numbers at septum during septum assembly","synonyms":[{"name":"accumulation of exocytic vesicles at division septum during septum assembly","type":"related"},{"name":"additional exocytic vesicles present at division septum during septum assembly","type":"exact"},{"name":"exocytic vesicles present in greater numbers at division septum during septum assembly","type":"exact"},{"name":"exocytic vesicles present in increased numbers at division septum during mitotic telophase","type":"related"},{"name":"exocytic vesicles present in increased numbers at division septum during septum assembly during mitotic cell cycle","type":"related"},{"name":"exocytic vesicles present in increased numbers at division septum during septum assembly during vegetative growth","type":"exact"},{"name":"exocytic vesicles present in increased numbers at septum during septation","type":"broad"},{"name":"exocytotic vesicles present in increased numbers at division septum during septum assembly","type":"exact"},{"name":"extra exocytic vesicles at division septum during septum assembly","type":"exact"},{"name":"post-Golgi secretory vesicles present in increased numbers at division septum during septum assembly","type":"related"}],"termid":"FYPO:0002088"}


id: PBO:0083736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential component of GPI-mannosyltransferase II; complex is responsible for second mannose addition to GPI precursors as a partner of Gpi18p; required for maturation of Gas1p and Pho8p; has synthetic genetic interactions with secretory pathway genes","termid":"PBO:0083736"}


id: GO:1990193
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein complex involved in cobalamin (vitamin B12) transport through the plasma membrane. In E. coli, the complex is a tetramer and consists of the cytoplasmic ATPase BtuD homodimer together with the transmembrane BtuC homodimer.","definition_xrefs":["PMID:22569249","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-binding cassette (ABC) transporter complex","termid":"GO:0043190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"BtuCD complex","synonyms":[{"name":"BtuC-BtuD complex","type":"exact"},{"name":"cobalamin transport complex, core subunit","type":"exact"},{"name":"vitamin B12 transport complex, core subunit","type":"exact"}],"termid":"GO:1990193"}


id: GO:0060662
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the solid core of salivary epithelium gives rise to the hollow tube of the gland.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube lumen cavitation","termid":"GO:0060605"},{"relation_name":"part_of","term_name":"salivary gland morphogenesis","termid":"GO:0007435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"salivary gland cavitation","synonyms":[{"name":"salivary gland invagination","type":"exact"}],"termid":"GO:0060662"}


id: MONDO:0800397
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited retinopathy caused by bi-allelic variants in the GRM6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"GRM6-related retinopathy","termid":"MONDO:0800397","xrefs":{"Monarch":{"xref_id":"0800397"}}}


id: PBO:0053748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 976","termid":"PBO:0053748"}


id: PBO:0003184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alanine aminotransferase (predicted)","termid":"PBO:0003184"}


id: PBO:0039344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALX homeobox 4","termid":"PBO:0039344"}


id: PBO:0034288
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-indirectly_inhibits","termid":"PBO:0034288"}


id: MONDO:0005610
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disabling osteochondrodysplasia with osteosclerosis, cone-shaped metaphysis, and shortening of the diaphysis. It is endemic in parts of Siberia and northern China. Mineral deficiencies (e.g., selenium, iodine), fungal cereal contamination, and water contamination may be contributing factors in its etiology.","definition_xrefs":["MESH:D057767"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrodysplasia","termid":"MONDO:0005516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Kashin-Beck disease","secondary_identifiers":["EFO:0006511","ICD9:716.06","UMLS:C2745963","icd11.foundation:211396970","ICD9:716.00","ICD9:716.08","SCTID:270505009","MEDGEN:412531"],"termid":"MONDO:0005610","xrefs":{"Monarch":{"xref_id":"0005610"}}}


id: PATO:0001421
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A viability quality inhering in a bearer by virtue of the bearer's condition before death.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viability","termid":"PATO:0000169"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alive","termid":"PATO:0001421"}


id: GO:0000973
data:
  {"annotated_genes":["SJAG_04347","SJAG_03299","SJAG_00298","SJAG_04148"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71629,72137,76105,77320],"is_not":false,"summary":null,"term":"GO:0000973"}]},"cv_name":"biological_process","definition":"The chromosome organization process in which the DNA sequence containing a gene transcribed by RNA polymerase II is maintained in a specific location at the nuclear periphery even after transcription has been repressed.","definition_xrefs":["PMID:17373856","PMID:18614049","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery","termid":"GO:0000972"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00298":null,"SJAG_03299":null,"SJAG_04148":null,"SJAG_04347":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-transcriptional tethering of RNA polymerase II gene DNA at nuclear periphery","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery","type":"exact"}],"termid":"GO:0000973","terms_by_termid":{"GO:0000973":null}}


id: PBO:0031089
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_manganese_depletion","termid":"PBO:0031089"}


id: MONDO:0700206
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Parvoviridae infectious disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease, non-human animal","termid":"MONDO:0700053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Parvoviridae infectious disease, non-human animal","termid":"MONDO:0700206","xrefs":{"Monarch":{"xref_id":"0700206"}}}


id: PBO:0073653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIM bHLH transcription factor 1","termid":"PBO:0073653"}


id: GO:0044679
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which catalyzes the conversion of methanophenazine and hydrogen to form dihydromethanophenazine. This typically consists of three polypeptides.","definition_xrefs":["PMID:9555882","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"methanophenazine reducing hydrogenase complex","termid":"GO:0044679"}


id: GO:0009906
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of the detection of a blue light photoperiod stimulus. Blue light is electromagnetic radiation with a wavelength of between 440 and 500nm.","definition_xrefs":["GOC:mtg_far_red","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to blue light","termid":"GO:0009637"},{"relation_name":"is_a","term_name":"photoperiodism","termid":"GO:0009648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to photoperiod, blue light","termid":"GO:0009906"}


id: MONDO:1012046
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cerebellar cortical atrophy, non-human animal","termid":"MONDO:1011836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebellar cortical atrophy, domestic cat","secondary_identifiers":["OMIA:000177-9685"],"termid":"MONDO:1012046","xrefs":{"Monarch":{"xref_id":"1012046"}}}


id: GO:0071924
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of chemokine (C-C motif) ligand 22 (CCL22) due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah","PMID:18832724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"chemokine (C-C motif) ligand 22 production","synonyms":[{"name":"C-C motif chemokine 22 production","type":"exact"},{"name":"CCL-22 production","type":"exact"},{"name":"CCL22 production","type":"exact"}],"termid":"GO:0071924"}


id: GO:0035465
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of activity of any TGF-beta receptor signaling pathway that is involved in the determination of the lateral plate mesoderm with respect to its left and right halves.","definition_xrefs":["PMID:15084459","GOC:dgh"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transforming growth factor beta receptor signaling pathway involved in determination of lateral mesoderm left/right asymmetry (obsolete GO:0035465)","synonyms":[{"name":"regulation of TGF-beta receptor signaling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"regulation of TGF-beta receptor signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"regulation of TGFbeta receptor signaling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"regulation of TGFbeta receptor signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"regulation of transforming growth factor beta receptor signaling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"regulation of transforming growth factor beta receptor signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"}],"termid":"GO:0035465"}


id: GO:0075247
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a dikaryotic spore of typically a rust fungus is produced in an aecium; in heteroecious rusts, the aeciospore is a spore stage that infects the alternate host.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aeciospore formation","termid":"GO:0075247"}


id: PBO:0016527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT-type ubiquitin-protein ligase E3 (predicted)","termid":"PBO:0016527"}


id: PBO:0028357
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_phosphatase_activity","termid":"PBO:0028357"}


id: MONDO:1011576
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neuronal ceroid lipofuscinosis that occurs in peach-faced lovebird.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"neuronal ceroid lipofuscinosis, non-human animal","termid":"MONDO:1011430"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal ceroid lipofuscinosis, peach-faced lovebird","secondary_identifiers":["OMIA:000181-60468"],"termid":"MONDO:1011576","xrefs":{"Monarch":{"xref_id":"1011576"}}}


id: MONDO:0100027
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete febrile seizures plus, genetic epilepsy with febrile seizures plus (obsolete MONDO:0100027)","termid":"MONDO:0100027","xrefs":{"Monarch":{"xref_id":"0100027"}}}


id: GO:1904644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a curcumin stimulus.","definition_xrefs":["PMID:24755072","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to ether","termid":"GO:0071362"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"},{"relation_name":"is_a","term_name":"response to curcumin","termid":"GO:1904643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to curcumin","termid":"GO:1904644"}


id: PBO:0049532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A.Z histone pseudogene 3","termid":"PBO:0049532"}


id: PBO:0047205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 219 member A","termid":"PBO:0047205"}


id: MONDO:0044680
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete short rib-polydactyly syndrome type 5 (obsolete MONDO:0044680)","termid":"MONDO:0044680","xrefs":{"Monarch":{"xref_id":"0044680"}}}


id: GO:0005837
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A large multisubunit protease found in the cytosol that recognizes, unfolds, and digests protein substrates that have been marked for degradation by the attachment of a ubiquitin group. Individual subcomplexes of the complete 26S proteasome are involved in these different tasks: the ATP-dependent 19S caps are believed to unfold substrates and feed them to the actual protease, the 20S proteasome.","definition_xrefs":["PMID:10410804"],"gene_count":0,"genotype_count":0,"name":"obsolete 26S proteasome (obsolete GO:0005837)","synonyms":[{"name":"26S proteasome","type":"exact"}],"termid":"GO:0005837"}


id: PBO:0033746
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_punctate_nuclear_protein_localization_during_cellular_response_to_ionizing_radiation","termid":"PBO:0033746"}


id: PBO:0045867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 beta 2","termid":"PBO:0045867"}


id: MONDO:0100403
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly loss of chromosome 17p. (A cytogenetic abnormality that refers to the loss of all or part of the short arm of chromosome 17 (17p).)","definition_xrefs":["NCIT:C36499"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004992","MONDO:0005570"],"is_obsolete":false,"name":"acute myeloid leukemia, loss of chromosome 17p","synonyms":[{"name":"AML, del(17p)","type":"exact"},{"name":"AML, loss of chromosome 17p","type":"exact"}],"termid":"MONDO:0100403","xrefs":{"Monarch":{"xref_id":"0100403"}}}


id: GO:0090676
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a calcium ion is transported from one side of a membrane to the other by means of a low voltage-gated calcium channel.","definition_xrefs":["GOC:PARL","GOC:bf","PMID:20371816"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium ion transmembrane transport","termid":"GO:0070588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"calcium ion transmembrane transport via low voltage-gated calcium channel","synonyms":[{"name":"generation of T-type calcium current","type":"related"}],"termid":"GO:0090676"}


id: PBO:0069294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 550, pseudogene","termid":"PBO:0069294"}


id: PBO:0075611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPOPL divergent transcript","termid":"PBO:0075611"}


id: PBO:0120290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NDUFS7 antisense RNA 1","termid":"PBO:0120290"}


id: GO:0035092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progressive compaction of the spermatid chromatin so that it reaches a level of condensation that is not compatible with nuclear activities such as transcription or DNA replication.","definition_xrefs":["GOC:bf","PMID:11735001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin organization","termid":"GO:0006325"},{"relation_name":"part_of","term_name":"spermatid nucleus differentiation","termid":"GO:0007289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006325","GO:0008150"],"is_obsolete":false,"name":"sperm DNA condensation","secondary_identifiers":["GO:0035093"],"synonyms":[{"name":"sperm chromatin condensation","type":"exact"},{"name":"spermatogenesis, exchange of chromosomal proteins","type":"related"}],"termid":"GO:0035092"}


id: MONDO:0011684
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitiligo-associated multiple autoimmune disease susceptibility 1","secondary_identifiers":["MEDGEN:335788","OMIM:606579","UMLS:C1847835"],"synonyms":[{"name":"VAMAS1","type":"related"},{"name":"systemic lupus erythematosus, vitiligo-related","type":"related"},{"name":"vitiligo","type":"related"},{"name":"vitiligo-associated multiple autoimmune disease susceptibility 1","type":"exact"},{"name":"vitiligo-associated multiple autoimmune disease susceptibility type 1","type":"exact"}],"termid":"MONDO:0011684","xrefs":{"Monarch":{"xref_id":"0011684"}}}


id: PBO:0082217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha 6 subunit of the 20S proteasome; protein abundance increases in response to DNA replication stress","termid":"PBO:0082217"}


id: MONDO:0002079
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete neuroendocrine tumor (obsolete MONDO:0002079)","termid":"MONDO:0002079","xrefs":{"Monarch":{"xref_id":"0002079"}}}


id: PBO:0077666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor superfamily member 12A","termid":"PBO:0077666"}


id: SO:0001514
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A quality of an insertion where the insert is not in a cytologically inverted orientation.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"insertion_attribute","termid":"SO:0001512"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"direct","termid":"SO:0001514"}


id: SO:0000354
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of intronic nucleotide sequence targeted by a nuclease enzyme.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclease_sensitive_site","termid":"SO:0000684"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"group_1_intron_homing_endonuclease_target_region","synonyms":[{"name":"group 1 intron homing endonuclease target region","type":"exact"}],"termid":"SO:0000354"}


id: MONDO:0017483
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"humeral agenesis/hypoplasia","termid":"MONDO:0017440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"humeral agenesis/hypoplasia, bilateral","secondary_identifiers":["Orphanet:295063"],"synonyms":[{"name":"humeral intercalary meromelia, bilateral","type":"exact"}],"termid":"MONDO:0017483","xrefs":{"Monarch":{"xref_id":"0017483"}}}


id: MONDO:0019087
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from the intrahepatic biliary tree (intrahepatic cholangiocarcinoma) or from the junction, or adjacent to the junction, of the right and left hepatic ducts (hilar cholangiocarcinoma). Grossly, the malignant lesions are solid, nodular, and grayish. Morphologically, the vast majority of cases are adenocarcinomas. Signs and symptoms include malaise, weight loss, right upper quadrant abdominal pain, and night sweats. Early detection is difficult and the prognosis is generally poor.","definition_xrefs":["NCIT:C4436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma of gallbladder and extrahepatic biliary tract","termid":"MONDO:0018536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"cholangiocarcinoma","secondary_identifiers":["EFO:0005221","MedDRA:10008593","Orphanet:70567","SCTID:312104005","MESH:D018281","NORD:926","UMLS:C0206698","MEDGEN:60210","MedDRA:10004593","ICDO:8160/3","icd11.foundation:2110597275","ONCOTREE:CHOL","DOID:4947","GARD:9304"],"synonyms":[{"name":"CC","type":"exact"},{"name":"CCA","type":"exact"},{"name":"Cholangiocar.- intra/extrahepatic","type":"exact"},{"name":"Cholangiocellular carcinoma","type":"exact"},{"name":"adult primary cholangiocarcinoma","type":"exact"},{"name":"adult primary cholangiocellular carcinoma","type":"exact"},{"name":"bile duct cancer","type":"broad"},{"name":"cholangiocarcinoma","type":"exact"},{"name":"cholangiocarcinoma, intrahepatic and extrahepatic bile ducts (adenocarcinoma)","type":"exact"},{"name":"cholangiocarcinoma, malignant","type":"exact"},{"name":"cholangiosarcoma","type":"exact"},{"name":"intrahepatic bile duct cancer (cholangiocarcinoma)","type":"broad"}],"termid":"MONDO:0019087","xrefs":{"Monarch":{"xref_id":"0019087"}}}


id: PR:Q9P7S2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 26S proteasome non-ATPase regulatory subunit 11 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00343","PANTHER:PTHR10678:SF2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S proteasome regulatory subunit rpn6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23G3.11","secondary_identifiers":["UniProtKB:Q9P7S2"],"synonyms":[{"name":"Spom972h-PSMD11","type":"exact"}],"termid":"PR:Q9P7S2"}


id: MONDO:0700223
data:
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id: MONDO:0011035
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A RASopathy and a variant of neurofibromatosis type 1 (NF1) characterized by the combination of features of NF1, such as cafe-au-lait spots, iris Lisch nodules, axillary and inguinal freckling, optic nerve glioma and multiple neurofibromas; and Noonan syndrome (NS), such as short stature, typical facial features (hypertelorism, ptosis, downslanting palpebral fissures, low-set posteriorly rotated ears with a thickened helix, and a broad forehead), congenital heart defects and unusual pectus deformity. As these three entities have significant phenotypic overlap, molecular genetic testing is often necessary for a correct diagnosis (such as when cafC)-au-lait spots are present in patients diagnosed with NS).","definition_xrefs":["Orphanet:638"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hyperpigmentation of the skin","termid":"MONDO:0019289"},{"relation_name":"excluded_subClassOf","term_name":"obsolete rare skin tumor or hamartoma (obsolete MONDO:0019300)","termid":"MONDO:0019300"},{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"},{"relation_name":"is_a","term_name":"RASopathy","termid":"MONDO:0021060"},{"relation_name":"is_a","term_name":"neurofibromatosis","termid":"MONDO:0021061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"neurofibromatosis-Noonan syndrome","secondary_identifiers":["MESH:C537393","SCTID:715344006","UMLS:C2931482","MESH:D009456","GARD:372","icd11.foundation:679913930","DOID:0111683","MEDGEN:419089","OMIM:601321"],"synonyms":[{"name":"NFNS","type":"exact"},{"name":"Noonan neurofibromatosis syndrome","type":"related"},{"name":"Noonan-neurofibromatosis syndrome","type":"related"},{"name":"neurofibromatosis type 1-Noonan syndrome","type":"exact"},{"name":"neurofibromatosis with Noonan phenotype","type":"related"},{"name":"neurofibromatosis-Noonan syndrome","type":"exact"}],"termid":"MONDO:0011035","xrefs":{"Monarch":{"xref_id":"0011035"}}}


id: FYPO:0000583
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which ascospore formation does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal sporulation","termid":"FYPO:0000121"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000121"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0000002","FYPO:0001985","FYPO:0000121"],"is_obsolete":false,"name":"abolished sporulation","synonyms":[{"name":"absent sporulation","type":"exact"},{"name":"ascospore formation abolished","type":"exact"},{"name":"sporulation abolished","type":"exact"},{"name":"sporulation: absent","type":"related"}],"termid":"FYPO:0000583"}


id: MONDO:1010854
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Krabbe disease that occurs in Rhesus monkey.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Krabbe disease, non-human animal","termid":"MONDO:1010170"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Krabbe disease, Rhesus monkey","secondary_identifiers":["OMIA:000578-9544"],"termid":"MONDO:1010854","xrefs":{"Monarch":{"xref_id":"1010854"}}}


id: PBO:0061429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor subfamily 1 group H member 2","termid":"PBO:0061429"}


id: GO:1901871
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ecgonone methyl ester.","definition_xrefs":["GOC:TermGenie","PMID:22665766"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkaloid catabolic process","termid":"GO:0009822"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"ecgonone methyl ester metabolic process","termid":"GO:1901870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"ecgonone methyl ester catabolic process","synonyms":[{"name":"ecgonone methyl ester breakdown","type":"exact"},{"name":"ecgonone methyl ester catabolism","type":"exact"},{"name":"ecgonone methyl ester degradation","type":"exact"}],"termid":"GO:1901871"}


id: FYPO:0005869
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is inviable and has one nucleus and more than one septum, and the cell diameter is larger than normal and the cell length is shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"multiseptate vegetative cell","termid":"FYPO:0000118"},{"relation_name":"is_a","term_name":"multiseptate vegetative cell","termid":"FYPO:0000118"},{"relation_name":"is_a","term_name":"inviable stubby septated vegetative cell","termid":"FYPO:0002200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000032","FYPO:0001985","FYPO:0001320","FYPO:0000005","FYPO:0000631","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"inviable stubby multiseptate vegetative cell","synonyms":[{"name":"inviable stubby multiseptate cell during vegetative growth","type":"exact"},{"name":"inviable stubby multiseptate vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable watermelon-shaped multiseptate vegetative cell","type":"exact"},{"name":"lethal; stubby multiseptate vegetative cell","type":"exact"},{"name":"stubby multiseptate inviable vegetative cell","type":"exact"}],"termid":"FYPO:0005869"}


id: PBO:0066900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 200","termid":"PBO:0066900"}


id: PR:Q9UST2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial inner membrane protease subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12383:SF3","PRO:DNx","OMA:SCHPO03408"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane protease subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC336.13c","secondary_identifiers":["UniProtKB:Q9UST2"],"synonyms":[{"name":"Spom972h-IMMP2L","type":"exact"}],"termid":"PR:Q9UST2"}


id: GO:0034070
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: acetyl-CoA + aminoglycoside = CoA + 1-N-acetylaminoglycoside. This is acetylation of the 1-amino group of the central deoxystreptamine ring.","definition_xrefs":["GOC:cb"],"gene_count":0,"genotype_count":0,"name":"obsolete aminoglycoside 1-N-acetyltransferase activity (obsolete GO:0034070)","termid":"GO:0034070"}


id: PBO:0067494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 629, pseudogene","termid":"PBO:0067494"}


id: MONDO:0020003
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare surgical cardiac disease (obsolete MONDO:0020003)","secondary_identifiers":["Orphanet:97965"],"termid":"MONDO:0020003","xrefs":{"Monarch":{"xref_id":"0020003"}}}


id: PBO:0064836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory inhibitor subunit 11 pseudogene 2","termid":"PBO:0064836"}


id: PBO:0056532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylcrotonyl-CoA carboxylase subunit 1","termid":"PBO:0056532"}


id: MONDO:0019612
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Functioning gonadotropic adenoma is a very rare pituitary tumor, macroscopically characterized by a soft, well vascularized, variable sized adenoma, with occasional areas of hemorrage or necrosis, that secretes biologically active gonadotropins. In addition to common neurological signs due to mass effect (headache and/or visual field deterioration), additional clinical manifestations include menstrual irregularities (secondary amenorrhea, oligomenorhea or severe menorrhagia), galactorrhea, infertility or ovarian hyperstimulation syndrome (in premenopausal women), testicular enlargement and, occasionally, hypogonadism (in men) and isosexual precocious puberty (in children).","definition_xrefs":["Orphanet:91348"],"direct_ancestors":[{"relation_name":"is_a","term_name":"functioning pituitary gland adenoma","termid":"MONDO:0003429"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functioning gonadotropic adenoma","secondary_identifiers":["NCIT:C45915","SCTID:254960002","ICD10CM:D35.2","GARD:19158","UMLS:C0346304","MEDGEN:577353"],"synonyms":[{"name":"functioning pituitary gonadotropic adenoma","type":"exact"},{"name":"gonadotroph adenoma","type":"exact"}],"termid":"MONDO:0019612","xrefs":{"Monarch":{"xref_id":"0019612"}}}


id: PBO:0063542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylethanolamine binding protein 1 pseudogene 1","termid":"PBO:0063542"}


id: MONDO:0002245
data:
  {"annotated_genes":["SJAG_03204","SJAG_02431","SJAG_04387","SJAG_04621","SJAG_04312","SJAG_04887","SJAG_02744","SJAG_02951","SJAG_02509","SJAG_02093","SJAG_03818","SJAG_02091","SJAG_04003","SJAG_04509","SJAG_01852","SJAG_03703","SJAG_01732","SJAG_01784"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88169],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957580"},{"annotations":[87906,87904,87905],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018794"},{"annotations":[88144,88145],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015912"},{"annotations":[88430],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0800047"},{"annotations":[88761,88762],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030827"},{"annotations":[87687],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014757"},{"annotations":[86936],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014078"},{"annotations":[88518],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014518"},{"annotations":[89005],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010743"},{"annotations":[88965,88963,88964],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958333"},{"annotations":[88093],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012775"},{"annotations":[88897],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010121"}]},"cv_name":"mondo","definition":"Disorders caused by abnormalities in platelet count or function.","definition_xrefs":["MESH:D001791"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hematologic disorder","termid":"MONDO:0005570"}],"gene_count":18,"genes_by_uniquename":{"SJAG_01732":null,"SJAG_01784":null,"SJAG_01852":null,"SJAG_02091":null,"SJAG_02093":null,"SJAG_02431":null,"SJAG_02509":null,"SJAG_02744":null,"SJAG_02951":null,"SJAG_03204":null,"SJAG_03703":null,"SJAG_03818":null,"SJAG_04003":null,"SJAG_04312":null,"SJAG_04387":null,"SJAG_04509":null,"SJAG_04621":null,"SJAG_04887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"blood platelet disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:57492","NCIT:C131634","UMLS:C0151854","SCTID:22716005"],"synonyms":[{"name":"platelet abnormality","type":"exact"},{"name":"platelet disorder","type":"exact"},{"name":"thrombocytopathy","type":"related"}],"termid":"MONDO:0002245","terms_by_termid":{"MONDO:0010121":null,"MONDO:0010743":null,"MONDO:0012775":null,"MONDO:0014078":null,"MONDO:0014518":null,"MONDO:0014757":null,"MONDO:0015912":null,"MONDO:0018794":null,"MONDO:0030827":null,"MONDO:0800047":null,"MONDO:0957580":null,"MONDO:0958333":null},"xrefs":{"Monarch":{"xref_id":"0002245"}}}


id: GO:0050667
data:
  {"annotated_genes":["SJAG_02972","SJAG_04042","SJAG_04459"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76295,80808],"is_not":false,"summary":null,"term":"GO:0050667"},{"annotations":[112358],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071269"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving homocysteine, the amino acid alpha-amino-gamma-mercaptobutanoic acid. Homocysteine is an important intermediate in the metabolic reactions of its S-methyl derivative, methionine.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur amino acid metabolic process","termid":"GO:0000096"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"},{"relation_name":"is_a","term_name":"alpha-amino acid metabolic process","termid":"GO:1901605"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02972":null,"SJAG_04042":null,"SJAG_04459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"homocysteine metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"Hcy metabolic process","type":"exact"},{"name":"Hcy metabolism","type":"exact"},{"name":"homocysteine metabolism","type":"exact"}],"termid":"GO:0050667","terms_by_termid":{"GO:0050667":null,"GO:0071269":null}}


id: PBO:0072555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras related GTP binding A pseudogene 1","termid":"PBO:0072555"}


id: GO:0018326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transient acetylation of peptidyl-cysteine to form S-acetyl-L-cysteine.","definition_xrefs":["RESID:AA0056"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via S-acetyl-L-cysteine (obsolete GO:0018326)","termid":"GO:0018326"}


id: GO:0019266
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of asparagine from other compounds, including oxaloacetate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxaloacetate metabolic process","termid":"GO:0006107"},{"relation_name":"is_a","term_name":"asparagine biosynthetic process","termid":"GO:0006529"},{"relation_name":"is_a","term_name":"dicarboxylic acid catabolic process","termid":"GO:0043649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"asparagine biosynthetic process from oxaloacetate","secondary_identifiers":["MetaCyc:ASPARAGINE-BIOSYNTHESIS"],"synonyms":[{"name":"asparagine anabolism from oxaloacetate","type":"exact"},{"name":"asparagine formation from oxaloacetate","type":"exact"},{"name":"asparagine synthesis from oxaloacetate","type":"exact"}],"termid":"GO:0019266"}


id: GO:0001683
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete axonemal dynein heavy chain (obsolete GO:0001683)","synonyms":[{"name":"axonemal dynein heavy chain","type":"exact"}],"termid":"GO:0001683"}


id: GO:0070680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A tRNA aminoacylation process in which asparaginyl-tRNAAsn is formed by a tRNA-dependent two-step pathway. In the first step a non-discriminating aspartyl-tRNA synthetase generates the misacylated L-aspartyl-tRNAAsn species, and in the second step it is amidated to the correctly charged L-asparaginyl-tRNAAsn by the heterotrimeric aspartyl-tRNAAsn amidotransferase.","definition_xrefs":["MetaCyc:PWY490-4","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA aminoacylation","termid":"GO:0043039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006399","GO:0006520"],"is_obsolete":false,"name":"asparaginyl-tRNAAsn biosynthesis via transamidation","termid":"GO:0070680"}


id: GO:0045301
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-methylsulfanyl-N(6)-dimethylallyladenosine(37) in tRNA + acceptor-H2 + O2 = N(6)-[(2E)-4-hydroxy-3-methylbut-2-en-1-yl]-2-(methylsulfanyl)adenosine(37) in tRNA + acceptor + H2O.","definition_xrefs":["RHEA:65812","PMID:8253666"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0140098","GO:0140101","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"tRNA 2-(methylsulfanyl)-N(6)-isopentenyladenosine(37) hydroxylase activity","secondary_identifiers":["EC:1.14.99.69"],"synonyms":[{"name":"2-methylthio-cis-ribozeatin hydroxylase activity","type":"exact"},{"name":"tRNA-(2-methylthio-N-6-(cis-hydroxy)isopentenyl adenosine)-hydroxylase activity","type":"exact"},{"name":"tRNA-(2-methylthio-N-6-(cis-hydroxy)isopentenyladenosine)-hydroxylase activity","type":"exact"},{"name":"tRNA-(ms2io6A)-hydroxylase activity","type":"exact"}],"termid":"GO:0045301"}


id: PBO:0073429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor 3a, subunit 3 pseudogene 1","termid":"PBO:0073429"}


id: FYECO:0000211
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which MMS (methyl methanesulfonate) was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ MMS","synonyms":[{"name":"methyl methanesulfonate added","type":"exact"}],"termid":"FYECO:0000211"}


id: PBO:0031697
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_nuclear_fusion_during_mating","termid":"PBO:0031697"}


id: PBO:0070431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome production factor 2 homolog pseudogene 1","termid":"PBO:0070431"}


id: GO:0010337
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving salicylic acid.","definition_xrefs":["PMID:14765119"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ketone metabolic process","termid":"GO:0010565"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"salicylic acid metabolic process","termid":"GO:0009696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of salicylic acid metabolic process","synonyms":[{"name":"regulation of salicylic acid metabolism","type":"related"}],"termid":"GO:0010337"}


id: PBO:0073833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 7 member 9","termid":"PBO:0073833"}


id: GO:1903327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tRNA metabolic process.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of RNA metabolic process","termid":"GO:0051253"},{"relation_name":"is_a","term_name":"regulation of tRNA metabolic process","termid":"GO:1903326"},{"relation_name":"negatively_regulates","term_name":"tRNA metabolic process","termid":"GO:0006399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006399"},{"rel_name":"regulates","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0006399","GO:0008150"],"is_obsolete":false,"name":"negative regulation of tRNA metabolic process","synonyms":[{"name":"down regulation of tRNA metabolic process","type":"exact"},{"name":"down regulation of tRNA metabolism","type":"exact"},{"name":"down-regulation of tRNA metabolic process","type":"exact"},{"name":"down-regulation of tRNA metabolism","type":"exact"},{"name":"downregulation of tRNA metabolic process","type":"exact"},{"name":"downregulation of tRNA metabolism","type":"exact"},{"name":"inhibition of tRNA metabolic process","type":"narrow"},{"name":"inhibition of tRNA metabolism","type":"narrow"},{"name":"negative regulation of tRNA metabolism","type":"exact"}],"termid":"GO:1903327"}


id: SO:0000321
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An mRNA with a plus 1 frameshift.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"plus_1_frameshift","termid":"SO:0000868"},{"relation_name":"is_a","term_name":"mRNA_with_frameshift","termid":"SO:0000108"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA_with_plus_1_frameshift","synonyms":[{"name":"mRNA with plus 1 frameshift","type":"exact"}],"termid":"SO:0000321"}


id: GO:0032941
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of a substance by a tissue.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"is_a","term_name":"secretion","termid":"GO:0046903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"secretion by tissue","synonyms":[{"name":"expulsion of gland contents","type":"related"},{"name":"tissue secretion","type":"exact"}],"termid":"GO:0032941"}


id: PBO:0001206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RWD domain","termid":"PBO:0001206"}


id: GO:0031532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that is carried out at the cellular level which results in dynamic structural changes to the arrangement of constituent parts of cytoskeletal structures comprising actin filaments and their associated proteins.","definition_xrefs":["GOC:mah","GOC:ecd"],"gene_count":0,"genotype_count":0,"name":"obsolete actin cytoskeleton reorganization (obsolete GO:0031532)","synonyms":[{"name":"actin cytoskeleton remodeling","type":"exact"},{"name":"actin cytoskeleton reorganisation","type":"exact"}],"termid":"GO:0031532"}


id: MONDO:0002790
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm that affects the seminal vesicle. Representative examples include cystadenoma and adenocarcinoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm of testis","termid":"MONDO:0021348"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"seminal vesicle tumor","secondary_identifiers":["MEDGEN:90967","NCIT:C39908","SCTID:236740006","UMLS:C0341767","ICD9:239.5","DOID:3855"],"synonyms":[{"name":"neoplasm of seminal vesicle","type":"exact"},{"name":"seminal vesicle neoplasm","type":"exact"},{"name":"seminal vesicle neoplasm (disease)","type":"exact"},{"name":"seminal vesicle tumor","type":"exact"},{"name":"tumor of seminal vesicle","type":"exact"},{"name":"tumour of seminal vesicle","type":"exact"}],"termid":"MONDO:0002790","xrefs":{"Monarch":{"xref_id":"0002790"}}}


id: PBO:0054369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1763","termid":"PBO:0054369"}


id: PR:O94585
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1442.13c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated protein C1442.13c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1442.13c","synonyms":[{"name":"Spom972h-SPCC1442.13c","type":"exact"},{"name":"meiotic chromosome segregation protein C1442.13c (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94585"}


id: MONDO:0018325
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Juvenile myasthenia gravis (MG) is a rare form of MG, an autoimmune disorder of the neuromuscular junction resulting in ocular manifestations or generalized weakness, with onset before 18 years of age.","definition_xrefs":["Orphanet:391497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myasthenia gravis","termid":"MONDO:0009688"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"juvenile myasthenia gravis","secondary_identifiers":["UMLS:C5680023","GARD:21624","MEDGEN:1842990"],"synonyms":[{"name":"childhood myasthenia gravis","type":"exact"},{"name":"juvenile acquired myasthenia","type":"exact"},{"name":"juvenile autoimmune myasthenia gravis","type":"exact"},{"name":"myasthenia gravis of childhood","type":"exact"},{"name":"paediatric myasthenia gravis","type":"exact"},{"name":"pediatric myasthenia gravis","type":"exact"}],"termid":"MONDO:0018325","xrefs":{"Monarch":{"xref_id":"0018325"}}}


id: PBO:0041906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cbl proto-oncogene B","termid":"PBO:0041906"}


id: MONDO:0005585
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of hypertension that occurs as a direct result of chemotherapy treatment","definition_xrefs":["EFO:0005942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypertensive disorder","termid":"MONDO:0005044"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chemotherapy-induced hypertension","termid":"MONDO:0005585","xrefs":{"Monarch":{"xref_id":"0005585"}}}


id: PBO:0063077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) polymerase gamma","termid":"PBO:0063077"}


id: GO:2000472
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hematopoietic stem cell migration.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell migration","termid":"GO:0030336"},{"relation_name":"is_a","term_name":"regulation of hematopoietic stem cell migration","termid":"GO:2000471"},{"relation_name":"negatively_regulates","term_name":"hematopoietic stem cell migration","termid":"GO:0035701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hematopoietic stem cell migration","synonyms":[{"name":"negative regulation of hemopoietic stem cell migration","type":"exact"}],"termid":"GO:2000472"}


id: PBO:0044486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 27 subfamily B member 1","termid":"PBO:0044486"}


id: PBO:0081560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 484","termid":"PBO:0081560"}


id: GO:0044331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of one cell to another cell via a cadherin, transmembrane proteins having repeating extracellular calcium ion binding domains.","definition_xrefs":["GOC:hjd","GOC:jl","PMID:10923970","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion","termid":"GO:0098609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"cell-cell adhesion mediated by cadherin","termid":"GO:0044331"}


id: SO:0002157
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene cassette array containing H+ mating type specific information.","definition_xrefs":["PMID:18354497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"silent_mating_type_cassette_array","termid":"SO:0001984"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mat2P","termid":"SO:0002157"}


id: PBO:0085311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidate phosphatase, converts phosphatidate to diacylglycerol; App1p, Pah1p, Dpp1p, and Lpp1p are responsible for all the phosphatidate phosphatase activity; component of cortical actin patches; interacts with components of endocytic pathway","termid":"PBO:0085311"}


id: PBO:0049616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 19","termid":"PBO:0049616"}


id: MONDO:0001437
data:
  {"annotated_genes":["SJAG_01159"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87622],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014206"}]},"cv_name":"mondo","definition":"A rare lung disorder characterized by the filling of the pulmonary alveoli with proteinaceous material which stains positive with periodic acid-Schiff stain. It may be idiopathic or secondary due to hematologic malignancies or the inhalation of mineral dusts. Signs and symptoms include dyspnea, cough and low grade fever.","definition_xrefs":["NCIT:C85037"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung disorder","termid":"MONDO:0005275"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01159":null},"genotype_count":0,"is_obsolete":false,"name":"pulmonary alveolar proteinosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:516.0","SCTID:10501004","icd11.foundation:1869739196","MEDGEN:1763046","UMLS:C5400698","DOID:12120","NANDO:1200746","MESH:D011649"],"synonyms":[{"name":"PAP","type":"broad"},{"name":"pulmonary alveolar proteinosis","type":"exact"}],"termid":"MONDO:0001437","terms_by_termid":{"MONDO:0014206":null},"xrefs":{"Monarch":{"xref_id":"0001437"}}}


id: PBO:0117252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TORC1 inhibitor, Ecl2","termid":"PBO:0117252"}


id: GO:0019364
data:
  {"annotated_genes":["SJAG_03828","SJAG_03903","SJAG_00027","SJAG_02135","SJAG_04334","SJAG_05314","SJAG_03091","SJAG_02369","SJAG_00461","SJAG_00685","SJAG_00605","SJAG_03373","SJAG_00839","SJAG_02009","SJAG_02107","SJAG_04192","SJAG_06621","SJAG_02785","SJAG_03660","SJAG_01310","SJAG_04048","SJAG_04495","SJAG_02945","SJAG_02796","SJAG_06622"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107282,96339,111237,99808,100079,107284,74174,107283,111238,111242,105461,79584,107653,111241,118210,111239,111243,111240,105204,107652],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[90422],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[74133],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019677"},{"annotations":[74134],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006742"},{"annotations":[77883,74826],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[71755],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006110"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a pyridine nucleotide, a nucleotide characterized by a pyridine derivative as a nitrogen base.","definition_xrefs":["GOC:pde","GOC:vw","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide catabolic process","termid":"GO:0009166"},{"relation_name":"is_a","term_name":"pyridine nucleotide metabolic process","termid":"GO:0019362"},{"relation_name":"is_a","term_name":"pyridine-containing compound catabolic process","termid":"GO:0072526"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00685":null,"SJAG_00839":null,"SJAG_01310":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02785":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03091":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"pyridine nucleotide catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"pyridine nucleotide breakdown","type":"exact"},{"name":"pyridine nucleotide catabolism","type":"exact"},{"name":"pyridine nucleotide degradation","type":"exact"}],"termid":"GO:0019364","terms_by_termid":{"GO:0006110":null,"GO:0006742":null,"GO:0019677":null,"GO:0045820":null,"GO:0061613":null,"GO:0061621":null}}


id: PBO:0082736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Rpd3L histone deacetylase complex; zinc-finger inhibitor of HO transcription; mRNA is localized and translated in the distal tip of anaphase cells, resulting in accumulation of Ash1p in daughter cell nuclei and inhibition of HO expression; potential Cdc28p substrate","termid":"PBO:0082736"}


id: GO:0106290
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (E)-cinnamate + ATP + CoA = (E)-cinnamoyl-CoA + AMP + diphosphate.","definition_xrefs":["PMID:22649270","RHEA:64788"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"trans-cinnamate-CoA ligase activity","termid":"GO:0106290"}


id: PBO:0049773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 9","termid":"PBO:0049773"}


id: SO:0001910
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A frameshift variant that causes the translational reading frame to be shortened relative to the reference feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"frameshift_variant","termid":"SO:0001589"},{"relation_name":"is_a","term_name":"feature_truncation","termid":"SO:0001906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frameshift_truncation","synonyms":[{"name":"ANNOVAR:frameshift deletion","type":"exact"},{"name":"Jannovar:frameshift_truncation","type":"exact"},{"name":"frameshift truncation","type":"exact"}],"termid":"SO:0001910"}


id: PBO:0031152
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_myo-inositol_import","termid":"PBO:0031152"}


id: PBO:0085406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane protein, putative ammonium transporter; regulation pattern suggests a possible role in export of ammonia from the cell; phosphorylated in mitochondria; member of the TC 9.B.33 YaaH family of putative transporters","termid":"PBO:0085406"}


id: GO:0006299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The repair of mismatched DNA where the gap to be repaired is only one nucleotide. DNA polymerase is the preferred polymerase in short patch repair, performing gap filling DNA synthesis and removal of the 5'-deoxyribose phosphate of the abasic site.","definition_xrefs":["PMID:10878254","PMID:10660619"],"gene_count":0,"genotype_count":0,"name":"obsolete short patch mismatch repair system (obsolete GO:0006299)","synonyms":[{"name":"short patch mismatch repair system","type":"exact"}],"termid":"GO:0006299"}


id: PBO:0085145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar S-adenosylmethionine-dependent rRNA methyltransferase; methylates adenine (m1A) of large subunit (LSU) rRNA at position 645; involved in pre-rRNA cleavage at site A2; mutation is synthetically lethal with gar1 mutation; deletion disrupts telomere maintenance by influencing expression of neighboring gene STN1; mammalian homolog nucleomethylin has been linked to nutrient availability signaling pathways and obesity","termid":"PBO:0085145"}


id: MONDO:0003933
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An uncommon malignant neoplasm that arises from the chest wall bones. Representative examples include chondrosarcoma, osteosarcoma, and Ewing sarcoma/peripheral primitive neuroectodermal tumor.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"chest wall lymphoma","termid":"MONDO:0003985"},{"relation_name":"is_a","term_name":"bone cancer","termid":"MONDO:0002129"},{"relation_name":"is_a","term_name":"malignant neoplasm of chest wall","termid":"MONDO:0021323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"chest wall bone cancer","secondary_identifiers":["DOID:6579","NCIT:C6724","MEDGEN:233148","UMLS:C1334572"],"synonyms":[{"name":"bone cancer of chest wall","type":"exact"},{"name":"chest wall bone cancer","type":"exact"},{"name":"malignant bone neoplasm of chest wall","type":"related"},{"name":"malignant bone neoplasm of the chest wall","type":"exact"},{"name":"malignant bone tumor of chest wall","type":"exact"},{"name":"malignant bone tumor of the chest wall","type":"exact"},{"name":"malignant bone tumour of chest wall","type":"exact"},{"name":"malignant bone tumour of the chest wall","type":"exact"},{"name":"malignant chest wall bone neoplasm","type":"exact"},{"name":"malignant chest wall bone tumor","type":"exact"},{"name":"malignant chest wall bone tumour","type":"exact"}],"termid":"MONDO:0003933","xrefs":{"Monarch":{"xref_id":"0003933"}}}


id: GO:0018557
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1,2-dihydroxyfluorene + O2 = 2-hydroxy-4-(2-oxo-1,3-dihydro-2H-inden-1-ylidene) but-2-enoic acid.","definition_xrefs":["UM-BBD_reactionID:r0422"],"gene_count":0,"genotype_count":0,"name":"obsolete 1,2-dihydroxyfluorene 1,1-alpha-dioxygenase activity (obsolete GO:0018557)","termid":"GO:0018557"}


id: PBO:0114640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, sulfur depletion response, Sdr1","termid":"PBO:0114640"}


id: GO:0033390
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of putrescine, 1,4-diaminobutane, from other compounds, including arginine, via the intermediate N-carbamoylputrescine; in this pathway, arginine is converted to agmatine, and agmatine is converted to putrescine in two single enzymatic steps.","definition_xrefs":["GOC:mah","MetaCyc:PWY-43"],"direct_ancestors":[{"relation_name":"is_a","term_name":"putrescine biosynthetic process from arginine","termid":"GO:0033388"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"putrescine biosynthetic process from arginine via N-carbamoylputrescine","synonyms":[{"name":"putrescine anabolism from arginine via N-carbamoylputrescine","type":"exact"},{"name":"putrescine biosynthesis from arginine via N-carbamoylputrescine","type":"exact"},{"name":"putrescine formation from arginine via N-carbamoylputrescine","type":"exact"},{"name":"putrescine synthesis from arginine via N-carbamoylputrescine","type":"exact"}],"termid":"GO:0033390"}


id: PBO:0084126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hexameric ring ATPase that remodels chromosome axis protein Hop1p; nucleolar component of the pachytene checkpoint, which prevents chromosome segregation when recombination and chromosome synapsis are defective; also represses meiotic interhomolog recombination in rDNA; required for meiotic double-stranded break formation","termid":"PBO:0084126"}


id: PBO:0030523
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_alpha,alpha-trehalase_activity_increase_during_cellular_response_to_salt_stress","termid":"PBO:0030523"}


id: GO:0004182
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: peptidyl-L-amino acid + H2O = peptide + L-amino acid. Little or no action with -Asp, -Glu, -Arg, -Lys or -Pro.","definition_xrefs":["EC:3.4.17.1"],"gene_count":0,"genotype_count":0,"name":"obsolete carboxypeptidase A activity (obsolete GO:0004182)","synonyms":[{"name":"carboxypeptidase A activity","type":"exact"},{"name":"carboxypolypeptidase activity","type":"related"},{"name":"pancreatic carboxypeptidase A","type":"related"},{"name":"tissue carboxypeptidase A","type":"related"}],"termid":"GO:0004182"}


id: GO:0008992
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of Ala-Gly bond in repressor lexA.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete repressor LexA activity (obsolete GO:0008992)","synonyms":[{"name":"LexA repressor","type":"related"},{"name":"repressor LexA activity","type":"exact"},{"name":"repressor lexA","type":"related"}],"termid":"GO:0008992"}


id: GO:0034050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell death resulting from activation of endogenous cellular processes after interaction with a symbiont (defined as the smaller of two, or more, organisms engaged in symbiosis, a close interaction encompassing mutualism through parasitism). This can be triggered by direct interaction with the organism, for example, contact with penetrating hyphae of a fungus; or an indirect interaction such as symbiont-secreted molecules.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"programmed cell death","termid":"GO:0012501"},{"relation_name":"is_a","term_name":"defense response to symbiont","termid":"GO:0140546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-induced defense-related programmed cell death","synonyms":[{"name":"host programmed cell death induced by symbiont","type":"exact"},{"name":"programmed cell death induced by symbiont","type":"exact"}],"termid":"GO:0034050"}


id: GO:0035111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which the anatomical structures of a leg joint are generated and organized. The leg joint is a flexible region that separates the rigid sections of a leg to allow movement in a controlled manner. One example is the knee, which separates the leg tibia and femur.","definition_xrefs":["GOC:bf","PMID:12051824","ISBN:0582227089"],"gene_count":0,"genotype_count":0,"name":"obsolete leg joint morphogenesis (obsolete GO:0035111)","synonyms":[{"name":"leg joint morphogenesis","type":"exact"}],"termid":"GO:0035111"}


id: PBO:0077842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPD52 like 1","termid":"PBO:0077842"}


id: PBO:0041714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calmodulin like 5","termid":"PBO:0041714"}


id: MONDO:0014180
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa simplex","termid":"MONDO:0017610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"epidermolysis bullosa simplex 3, localized or generalized intermediate, with BP230 deficiency","secondary_identifiers":["GARD:17690","Orphanet:412181","MEDGEN:815800","UMLS:C3809470","OMIM:615425"],"synonyms":[{"name":"DST-related epidermolysis bullosa simplex","type":"exact"},{"name":"EBS-AR BP230","type":"exact"},{"name":"EBSB2","type":"related"},{"name":"epidermolysis bullosa simplex 3, localised or generalised intermediate, with bp230 deficiency","type":"exact"},{"name":"epidermolysis bullosa simplex 3, localized or generalized intermediate, with bp230 deficiency","type":"exact"},{"name":"epidermolysis bullosa simplex due to BP230 deficiency","type":"exact"},{"name":"epidermolysis bullosa simplex, autosomal recessive 2","type":"related"},{"name":"epidermolysis bullosa simplex, autosomal recessive type 2","type":"exact"}],"termid":"MONDO:0014180","xrefs":{"Monarch":{"xref_id":"0014180"}}}


id: PBO:0077275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 14C","termid":"PBO:0077275"}


id: PBO:0062852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otoferlin","termid":"PBO:0062852"}


id: PBO:0078441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor gamma constant 1","termid":"PBO:0078441"}


id: PBO:0078281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 14-1","termid":"PBO:0078281"}


id: GO:0019032
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete viral glycoprotein (obsolete GO:0019032)","synonyms":[{"name":"viral glycoprotein","type":"exact"}],"termid":"GO:0019032"}


id: GO:1901281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of fructoselysine.","definition_xrefs":["GOC:yaf","UniPathway:UPA00784","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructosamine catabolic process","termid":"GO:0030392"},{"relation_name":"is_a","term_name":"fructoselysine metabolic process","termid":"GO:0030393"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"fructoselysine catabolic process","synonyms":[{"name":"fructosyllysine breakdown","type":"exact"},{"name":"fructosyllysine catabolic process","type":"exact"},{"name":"fructosyllysine catabolism","type":"exact"},{"name":"fructosyllysine degradation","type":"exact"}],"termid":"GO:1901281"}


id: GO:0042342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cyanogenic glycosides, any glycoside containing a cyano group that is released as hydrocyanic acid on acid hydrolysis; such compounds occur in the kernels of various fruits.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside catabolic process","termid":"GO:0016139"},{"relation_name":"is_a","term_name":"cyanogenic glycoside metabolic process","termid":"GO:0042341"},{"relation_name":"is_a","term_name":"nitrile catabolic process","termid":"GO:0050899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"cyanogenic glycoside catabolic process","synonyms":[{"name":"cyanogenic glycoside breakdown","type":"exact"},{"name":"cyanogenic glycoside catabolism","type":"exact"},{"name":"cyanogenic glycoside degradation","type":"exact"}],"termid":"GO:0042342"}


id: PBO:0079595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 E1","termid":"PBO:0079595"}


id: FYPO:0006569
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which DNA repair is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular response to stress during vegetative growth","termid":"FYPO:0000968"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000298","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal DNA repair","synonyms":[{"name":"normal DNA repair during mitotic cell cycle","type":"related"},{"name":"normal DNA repair during vegetative growth","type":"exact"}],"termid":"FYPO:0006569"}


id: GO:0021757
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the caudate nucleus over time from its initial formation until its mature state. The caudate nucleus is the C-shaped structures of the striatum containing input neurons involved with control of voluntary movement in the brain.","definition_xrefs":["GOC:cls","GOC:dgh","GOC:dph","GOC:jid","ISBN:0878937420","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"striatum development","termid":"GO:0021756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"caudate nucleus development","termid":"GO:0021757"}


id: MONDO:0002967
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dermatophytosis involving the stratum corneum of the skin of the scalp and beard area.","definition_xrefs":["NCIT:C34536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatophytosis","termid":"MONDO:0004678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"dermatophytosis of scalp or beard","secondary_identifiers":["ICD10CM:B35.0","UMLS:C0011640","ICD9:110.0","MEDGEN:4237","SCTID:266148000","DOID:4337"],"synonyms":[{"name":"Trichophyton rubrum tinea capitis","type":"exact"},{"name":"dermatophytosis of scalp","type":"related"},{"name":"dermatophytosis of scalp and beard","type":"exact"},{"name":"scalp dermatophytosis","type":"exact"},{"name":"scalp ringworm","type":"exact"},{"name":"tinea capitis","type":"related"},{"name":"tinea capitis due to Trichophyton rubrum","type":"exact"}],"termid":"MONDO:0002967","xrefs":{"Monarch":{"xref_id":"0002967"}}}


id: PBO:0045979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EHD4 antisense RNA 1","termid":"PBO:0045979"}


id: MONDO:0006579
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, darkly pigmented skin lesion characterized by proliferation of keratinocytes and melanocytes.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"seborrheic keratosis","termid":"MONDO:0008420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"melanoacanthoma","secondary_identifiers":["EFO:1000733","SCTID:394727000","Wikipedia:Melanocanthoma","MEDGEN:272110","NCIT:C27548","UMLS:C1321683","DOID:11684"],"termid":"MONDO:0006579","xrefs":{"Monarch":{"xref_id":"0006579"}}}


id: GO:1990955
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to G-rich, single-stranded DNA.","definition_xrefs":["GOC:hjd","PMID:8493094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single-stranded DNA binding","termid":"GO:0003697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0003677","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"G-rich single-stranded DNA binding","termid":"GO:1990955"}


id: PBO:0061318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore complex interacting protein family member A3","termid":"PBO:0061318"}


id: MONDO:0002112
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, benign neoplasm that arises from the peritoneum and is characterized by the presence of gland like structures. Cytologic atypia is absent.","definition_xrefs":["NCIT:C7354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peritoneal benign neoplasm","termid":"MONDO:0000650"},{"relation_name":"is_a","term_name":"benign mesothelioma","termid":"MONDO:0002373"},{"relation_name":"is_a","term_name":"peritoneal mesothelioma","termid":"MONDO:0006362"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign peritoneal mesothelioma","secondary_identifiers":["DOID:1789","MEDGEN:87540","UMLS:C0346113"],"synonyms":[{"name":"mesothelioma of peritoneum","type":"broad"},{"name":"peritoneal adenomatoid tumor","type":"exact"},{"name":"peritoneal adenomatoid tumour","type":"exact"},{"name":"peritoneum benign mesothelioma","type":"exact"}],"termid":"MONDO:0002112","xrefs":{"Monarch":{"xref_id":"0002112"}}}


id: PBO:0066667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RIPOR3 antisense RNA 1","termid":"PBO:0066667"}


id: GO:1903150
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any calcium ion transmembrane transporter activity that is involved in calcium ion import into cell.","definition_xrefs":["ISBN:0-8249-3695-6","GOC:dos","GOC:TermGenie","GO_REF:0000061"],"gene_count":0,"genotype_count":0,"name":"obsolete calcium ion transmembrane transporter activity involved in calcium ion import into cell (obsolete GO:1903150)","synonyms":[{"name":"calcium ion transmembrane transporter activity involved in calcium ion import into cell","type":"exact"},{"name":"calcium ion transmembrane transporter activity involved in calcium ion uptake into cell","type":"exact"}],"termid":"GO:1903150"}


id: PBO:0047017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A20, pseudogene","termid":"PBO:0047017"}


id: GO:0098784
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that results in the assembly, arrangement of constituent parts, or disassembly of a biofilm matrix.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix organization","termid":"GO:0030198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"biofilm matrix organization","synonyms":[{"name":"biofilm matrix organization and biogenesis","type":"related"}],"termid":"GO:0098784"}


id: GO:0044441
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a cilium, a specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic (plasma) membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole.","definition_xrefs":["GOC:cilia","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete ciliary part (obsolete GO:0044441)","synonyms":[{"name":"cilial part","type":"exact"},{"name":"cilium part","type":"exact"},{"name":"flagellar part","type":"narrow"},{"name":"flagellum component","type":"narrow"},{"name":"flagellum part","type":"narrow"},{"name":"microtubule-based flagellum part","type":"exact"}],"termid":"GO:0044441"}


id: MONDO:0016884
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of chromosome 2","termid":"MONDO:0016867"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial deletion of the short arm of chromosome 2","secondary_identifiers":["MEDGEN:1826019","Orphanet:261866","icd11.foundation:1610083208","GARD:20807","UMLS:C5679664"],"synonyms":[{"name":"partial deletion of chromosome 2p","type":"exact"},{"name":"partial deletion of the short arm of chromosome type 2","type":"exact"},{"name":"partial monosomy of chromosome 2p","type":"exact"},{"name":"partial monosomy of the short arm of chromosome 2","type":"exact"}],"termid":"MONDO:0016884","xrefs":{"Monarch":{"xref_id":"0016884"}}}


id: PBO:0029721
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cell_wall_galactomannan_level","termid":"PBO:0029721"}


id: PBO:0026825
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_protein_localization_to_chromatin_at_replication_origin","termid":"PBO:0026825"}


id: GO:0000311
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The larger of the two subunits of a plastid ribosome. Two sites on the ribosomal large subunit are involved in translation: the aminoacyl site (A site) and peptidyl site (P site).","definition_xrefs":["GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organellar large ribosomal subunit","termid":"GO:0000315"},{"relation_name":"part_of","term_name":"plastid ribosome","termid":"GO:0009547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"plastid large ribosomal subunit","termid":"GO:0000311"}


id: GO:0070433
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of the nucleotide-binding oligomerization domain containing 2 (NOD2) pathway.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway","termid":"GO:0070425"},{"relation_name":"is_a","term_name":"regulation of nucleotide-binding oligomerization domain containing 2 signaling pathway","termid":"GO:0070432"},{"relation_name":"negatively_regulates","term_name":"nucleotide-binding oligomerization domain containing 2 signaling pathway","termid":"GO:0070431"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of nucleotide-binding oligomerization domain containing 2 signaling pathway","synonyms":[{"name":"negative regulation of NOD2 signaling pathway","type":"exact"},{"name":"negative regulation of nucleotide-binding oligomerization domain containing 2 signalling pathway","type":"exact"}],"termid":"GO:0070433"}


id: PBO:0030404
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_Man8GlcNAc_level","termid":"PBO:0030404"}


id: GO:0031544
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: peptidyl L-proline + 2-oxoglutarate + O2 = peptidyl trans-3-hydroxy-L-proline + succinate + CO2.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-proline dioxygenase activity","termid":"GO:0031543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140096","GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"peptidyl-proline 3-dioxygenase activity","secondary_identifiers":["Reactome:R-HSA-9630769"],"termid":"GO:0031544"}


id: MONDO:0020232
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete musculoskeletal disease with cataract (obsolete MONDO:0020232)","secondary_identifiers":["Orphanet:98648"],"termid":"MONDO:0020232","xrefs":{"Monarch":{"xref_id":"0020232"}}}


id: GO:0010530
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transposition. Transposition results in the movement of discrete segments of DNA between nonhomologous sites.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transposition (obsolete GO:0010530)","termid":"GO:0010530"}


id: MOD:01274
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by formation of an adduct with 4-(2-aminoethyl)benzenesulfonyl fluoride, AEBS, and an L-histidine residue.","definition_xrefs":["Unimod:276#H","PubMed:8597590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"4-(2-aminoethyl)benzenesulfonyl fluoride derivatized residue","termid":"MOD:00596"},{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N'-[4-(2-aminoethyl)benzenesulfonyl] derivatized histidine","synonyms":[{"name":"AEBS","type":"related"},{"name":"Aminoethylbenzenesulfonylation","type":"related"}],"termid":"MOD:01274"}


id: PBO:0015255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sir antagonist, ubiquitin-protein ligase E3","termid":"PBO:0015255"}


id: GO:0044580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions a resulting in the resulting in the breakdown of butyryl-CoA.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid catabolic process","termid":"GO:0009062"},{"relation_name":"is_a","term_name":"fatty-acyl-CoA catabolic process","termid":"GO:0036115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0006790","GO:0008150","GO:0006629","GO:0055086"],"is_obsolete":false,"name":"butyryl-CoA catabolic process","synonyms":[{"name":"butyryl-CoA catabolism","type":"exact"}],"termid":"GO:0044580"}


id: GO:0097161
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a DH (Dbl homology) domain of a protein. The DH domain contains three structurally conserved regions separated by more variable regions. It is composed of 11 alpha helices that are folded into a flattened, elongated alpha-helix bundle in which two of the three conserved regions, conserved region 1 (CR1) and conserved region 3 (CR3), are exposed near the centre of one surface. CR1 and CR3, together with a part of alpha-6 and the DH/PH (pleckstrin homology) junction site, constitute the Rho GTPase interacting pocket.","definition_xrefs":["GOC:yaf","InterPro:IPR000219","PMID:12775584"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"DH domain binding","termid":"GO:0097161"}


id: PBO:0065378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pregnancy specific beta-1-glycoprotein 6","termid":"PBO:0065378"}


id: MONDO:0003067
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the cervical lymph nodes.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphadenitis","termid":"MONDO:0002052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"cervical lymphadenitis","secondary_identifiers":["NCIT:C26937","DOID:4637","SCTID:3502005","MEDGEN:101763","UMLS:C0149642"],"synonyms":[{"name":"cervical adenitis","type":"exact"},{"name":"lymphadenitis (disease) of neck","type":"exact"},{"name":"neck lymphadenitis (disease)","type":"exact"}],"termid":"MONDO:0003067","xrefs":{"Monarch":{"xref_id":"0003067"}}}


id: MONDO:0001295
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autonomic nervous system disorder","termid":"MONDO:0001292"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"idiopathic peripheral autonomic neuropathy","secondary_identifiers":["SCTID:86489003","ICD9:337.00","UMLS:C0154690","ICD9:337.0","DOID:11488","icd11.foundation:1422269907","MEDGEN:509630","ICD10CM:G90.0"],"termid":"MONDO:0001295","xrefs":{"Monarch":{"xref_id":"0001295"}}}


id: GO:0120551
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of succinyl-CoA from 2-oxoglutarate.  In most organisms, this pathway is part of the TCA cycle and comprises a series of three reactions carried out by a multisubunit complex called the '2-oxoglutarate dehydrogenase complex', even though 2-oxoglutarate dehydrogenase activity describes only one of those reactions. The combination of the three reactions can be summarized as: 2-oxoglutarate + coenzyme A + NAD+ -> succinyl-CoA + CO2 + NADH.","definition_xrefs":["MetaCyc:PWY-5084"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate metabolic process","termid":"GO:0006103"},{"relation_name":"is_a","term_name":"succinyl-CoA biosynthetic process","termid":"GO:1901290"},{"relation_name":"part_of","term_name":"tricarboxylic acid cycle","termid":"GO:0006099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"part_of","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006091","GO:0006790","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"2-oxoglutarate decarboxylation to succinyl-CoA","synonyms":[{"name":"2-ketoglutarate dehydrogenase system","type":"exact"},{"name":"2-oxoglutarate dehydrogenase system","type":"exact"},{"name":"2alpha-ketoglutarate dehydrogenase system","type":"exact"}],"termid":"GO:0120551"}


id: MONDO:0011164
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"malignant hyperthermia, susceptibility to","termid":"MONDO:0800188"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malignant hyperthermia, susceptibility to, 6","secondary_identifiers":["MESH:C535699","OMIM:601888","UMLS:C1866076","MEDGEN:356150"],"synonyms":[{"name":"MHS6","type":"related"},{"name":"Mhs6","type":"related"},{"name":"malignant hyperpyrexia susceptibility type 6","type":"related"},{"name":"malignant hyperthermia susceptibility 6","type":"exact"},{"name":"malignant hyperthermia susceptibility type 6","type":"related"},{"name":"malignant hyperthermia, susceptibility to, 6","type":"exact"},{"name":"malignant hyperthermia, susceptibility to, type 6","type":"exact"}],"termid":"MONDO:0011164","xrefs":{"Monarch":{"xref_id":"0011164"}}}


id: PBO:0034551
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_subtelomeric_chromatin_knob_formation","termid":"PBO:0034551"}


id: PBO:0117076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PEA15 antisense RNA 1","termid":"PBO:0117076"}


id: PBO:0039817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor GTPase activating protein 1","termid":"PBO:0039817"}


id: FYPO:0005188
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of cell cycle arrest in response to hydroxyurea exposure begins later than normal. Normally, cell cycle progression is slowed or arrested transiently following exposure to hydroxyurea.","definition_xrefs":["PMID:19546237","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cell cycle arrest in mitotic G1 phase in response to nitrogen starvation","termid":"FYPO:0000711"},{"relation_name":"is_a","term_name":"abnormal cellular response to starvation during vegetative growth","termid":"FYPO:0001339"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle regulation during cellular response to hydroxyurea","termid":"FYPO:0001933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000298","FYPO:0000631","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"delayed onset of mitotic cell cycle arrest during cellular response to hydroxyurea","synonyms":[{"name":"delayed cell cycle arrest during cellular response to hydroxyurea","type":"exact"},{"name":"delayed cell cycle arrest in response to hydroxyurea","type":"exact"},{"name":"delayed onset of cell cycle arrest during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"delayed onset of mitotic cell cycle arrest during cellular response to HU","type":"exact"}],"termid":"FYPO:0005188"}


id: PBO:0055759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA radiation induced regulator of PLK1 and RAD51","termid":"PBO:0055759"}


id: GO:0001720
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification process that results in the conversion of lysine, carried by a specialized lysine-accepting tRNA (possessing a CUA anticodon), to pyrrolysine (a lysine with an amide linkage to a (4R,5R)-4-substituted pyrroline-5-carboxylate).","definition_xrefs":["PMID:12029132","PMID:12029131","PMID:12121639"],"direct_ancestors":[{"relation_name":"is_a","term_name":"charged-tRNA amino acid modification","termid":"GO:0019988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006399","GO:0010467"],"is_obsolete":false,"name":"conversion of lysyl-tRNA to pyrrolysyl-tRNA","termid":"GO:0001720"}


id: GO:0044618
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. OBSOLETE. The process in which an organism effects a change in the relaxation of smooth muscle in the uterus of a second organism.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete obsolete modulation of relaxation of uterine smooth muscle in another organism (obsolete GO:0044618)","synonyms":[{"name":"modulation of relaxation of uterine smooth muscle in other organism","type":"exact"},{"name":"regulation of relaxation of uterine smooth muscle in other organism","type":"exact"}],"termid":"GO:0044618"}


id: PBO:0090491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"up-frameshift suppressor 3 family protein","termid":"PBO:0090491"}


id: GO:0007375
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Internalization of the anterior midgut into the interior of the embryo.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of embryonic epithelium","termid":"GO:0016331"},{"relation_name":"part_of","term_name":"gastrulation involving germ band extension","termid":"GO:0010004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior midgut invagination","termid":"GO:0007375"}


id: PBO:0073327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family A member 3","termid":"PBO:0073327"}


id: PBO:0003008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER unfolded protein response protein (predicted)","termid":"PBO:0003008"}


id: GO:0016453
data:
  {"annotated_genes":["SJAG_00413"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74896],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003985"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of an acetyl group to a carbon atom on the acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetyltransferase activity","termid":"GO:0016407"},{"relation_name":"is_a","term_name":"C-acyltransferase activity","termid":"GO:0016408"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00413":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"C-acetyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0016453","terms_by_termid":{"GO:0003985":null}}


id: GO:0009361
data:
  {"annotated_genes":["SJAG_01524","SJAG_03813"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[77072,116833],"is_not":false,"summary":null,"term":"GO:0009361"}]},"cv_name":"cellular_component","definition":"A heterodimeric enzyme complex, composed of an alpha and beta chain, most usually found in (but not limited to) bacteria. Functions in the TCA cycle, hydrolyzing succinyl-CoA into succinate and CoA, thereby forming ATP.","definition_xrefs":["GOC:jl","PMID:9874242"],"direct_ancestors":[{"relation_name":"is_a","term_name":"succinate-CoA ligase complex","termid":"GO:0042709"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01524":null,"SJAG_03813":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"succinate-CoA ligase complex (ADP-forming)","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"succinyl-CoA synthetase, ADP-forming","type":"exact"}],"termid":"GO:0009361","terms_by_termid":{"GO:0009361":null}}


id: PBO:0084014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycogen synthase kinase 3 (GSK-3) homolog; one of four GSK-3 homologs in S. cerevisiae that function to activate Msn2p-dependent transcription of stress responsive genes and that function in protein degradation; MRK1 has a paralog, RIM11, that arose from the whole genome duplication","termid":"PBO:0084014"}


id: PBO:0089054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation elongation factor 2 (EF-2) Eft2","termid":"PBO:0089054"}


id: MONDO:0043275
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome that results from a group of infections that affect the fetus or the newborn. The group of infections includes Toxoplasma gondii, rubella, cytomegalovirus, herpes simplex virus, and other infections. The other infections include varicella-zoster virus, hepatitis B virus, human immunodeficiency virus, parvovirus B19, and syphilis. Signs and symptoms include fever, feeding difficulties, petechial rash, jaundice, hepatosplenomegaly, chorioretinitis, and microcephaly.","definition_xrefs":["NCIT:C98609"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-infectious syndrome","termid":"MONDO:0021670"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TORCH syndrome","secondary_identifiers":["MEDGEN:78715","SCTID:41679006","UMLS:C0270173","DOID:0080835"],"synonyms":[{"name":"TORCH infection","type":"exact"},{"name":"TORCH syndrome","type":"exact"},{"name":"Toxoplasma, rubella, cytomegalovirus and herpes simplex mixed infection","type":"related"},{"name":"torch syndrome","type":"exact"},{"name":"toxoplasmosis, Other infections, Rubella, Cytomegalovirus, and Herpes simplex Virus (TORCH) syndrome","type":"exact"},{"name":"toxoplasmosis, other infections, rubella, cytomegalovirus, and herpes simplex virus (torch) syndrome","type":"related"},{"name":"toxoplasmosis, other infections, rubella, cytomegalovirus, and herpes simplex virus syndrome","type":"related"}],"termid":"MONDO:0043275","xrefs":{"Monarch":{"xref_id":"0043275"}}}


id: GO:0097355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is transported to, or maintained at, a part of a chromosome that is organized into heterochromatin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to chromatin","termid":"GO:0071168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to heterochromatin","synonyms":[{"name":"protein localisation to heterochromatin","type":"exact"}],"termid":"GO:0097355"}


id: PBO:0086898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transporter in the major facilitator superfamily; member of the 12-spanner drug:H(+) antiporter DHA1 family; mutations in membrane-spanning domains permit cation and histidinol uptake","termid":"PBO:0086898"}


id: PBO:0045300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 2","termid":"PBO:0045300"}


id: PBO:0027720
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_acetylation","termid":"PBO:0027720"}


id: PBO:0064025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 59","termid":"PBO:0064025"}


id: MONDO:0014921
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any early infantile epileptic encephalopathy in which the cause of the disease is a mutation in the GABRB3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Lennox-Gastaut syndrome","termid":"MONDO:0016532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 43","secondary_identifiers":["DOID:0080447","GARD:16192","OMIM:617113","MEDGEN:934679","UMLS:C4310712"],"synonyms":[{"name":"DEE43","type":"exact"},{"name":"EIEE43","type":"exact"},{"name":"GABRB3 early infantile epileptic encephalopathy","type":"exact"},{"name":"developmental and epileptic encephalopathy 43","type":"exact"},{"name":"early infantile epileptic encephalopathy caused by mutation in GABRB3","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 43","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 43; EIEE43","type":"exact"},{"name":"epileptic encephalopathy, early infantile, type 43","type":"exact"}],"termid":"MONDO:0014921","xrefs":{"Monarch":{"xref_id":"0014921"}}}


id: MONDO:0100625
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dementia beginning in childhood or adolescence. This term denotes a group of conditions that cause early-onset progressive neurocognitive decline.","definition_xrefs":["PMID:37471493","PMID:37806042","PMID:39948021","PMID:39986708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dementia","termid":"MONDO:0001627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"childhood-onset dementia","synonyms":[{"name":"childhood dementia","type":"exact"},{"name":"pediatric dementia","type":"exact"}],"termid":"MONDO:0100625","xrefs":{"Monarch":{"xref_id":"0100625"}}}


id: PBO:0031215
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_oxidation_during_vegetative_growth","termid":"PBO:0031215"}


id: PBO:0038582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and BTB domain containing 2","termid":"PBO:0038582"}


id: GO:0033672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of NAD kinase activity, the catalysis of the transfer of a phosphate group, usually from ATP, to an NAD molecule.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of NAD+ kinase activity (obsolete GO:0033672)","synonyms":[{"name":"NAD+ kinase activator","type":"narrow"},{"name":"stimulation of NAD+ kinase activity","type":"narrow"},{"name":"up regulation of NAD+ kinase activity","type":"exact"},{"name":"up-regulation of NAD+ kinase activity","type":"exact"},{"name":"upregulation of NAD+ kinase activity","type":"exact"}],"termid":"GO:0033672"}


id: MONDO:0020553
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Secondary pulmonary hemosiderosis is a respiratory disease due to the deposition of hemosiderin-laden macrophages in lungs as a result of repeated alveolar hemorrhage secondary to another disease, especially dysimmunitary disorders (i.e. Heiner syndrome, autoimmune diseases), thrombotic disorders and cardiovascular disorders such as mitral stenosis. It manifests as a triad of hemoptysis, anemia and diffuse parenchymal infiltrates on chest radiography","definition_xrefs":["Orphanet:99930"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interstitial lung disease","termid":"MONDO:0015925"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secondary pulmonary hemosiderosis","secondary_identifiers":["GARD:19713","icd11.foundation:878618614","UMLS:C4274326","ICD10EXP:J99.8*","ICD10EXP:E83.1+","MEDGEN:909854","SCTID:716712004"],"termid":"MONDO:0020553","xrefs":{"Monarch":{"xref_id":"0020553"}}}


id: PBO:0113270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phospholipid translocase (flippase); involved in generating phospholipid asymmetry in plasma membrane; involved in endocytosis, vacuolar biogenesis and Golgi-to-ER vesicle-mediated transport; localizes to endosomes and Golgi apparatus; targeted to vacuole via AP-3 pathway","termid":"PBO:0113270"}


id: FYPO:0001506
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylcholine measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal cellular phosphatidylcholine level","synonyms":[{"name":"normal cellular PC level","type":"exact"},{"name":"normal cellular phosphatidylcholine accumulation","type":"related"},{"name":"normal cellular phosphatidylcholine level during mitotic cell cycle","type":"related"},{"name":"normal cellular phosphatidylcholine level during vegetative growth","type":"exact"}],"termid":"FYPO:0001506"}


id: GO:0052568
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of phytoalexins produced as part of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete response to symbiont phytoalexin production (obsolete GO:0052568)","synonyms":[{"name":"response to symbiont phytoalexin production","type":"exact"}],"termid":"GO:0052568"}


id: PBO:0064210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase B1","termid":"PBO:0064210"}


id: PBO:0034606
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_level_during_cellular_response_to_iron_ion_starvation","termid":"PBO:0034606"}


id: PBO:0027521
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_cycle","termid":"PBO:0027521"}


id: PBO:0065726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Prader-Willi region non-protein coding RNA 3","termid":"PBO:0065726"}


id: MOD:00535
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["PubMed:12216740","Unimod:178"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorylation to amine thiol","synonyms":[{"name":"DAET","type":"related"},{"name":"phosphorylation to amine thiol","type":"related"}],"termid":"MOD:00535"}


id: GO:0010431
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in seed development that occurs after embryogenesis by which a quiescent state is established in a seed. Seed maturation is characterized by storage compound accumulation, acquisition of desiccation tolerance, growth arrest and the entry into a dormancy period of variable length that is broken upon germination.","definition_xrefs":["PMID:16096971"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"developmental maturation","termid":"GO:0021700"},{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"},{"relation_name":"part_of","term_name":"seed development","termid":"GO:0048316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"seed maturation","termid":"GO:0010431"}


id: PBO:0085085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear envelope/ER integral membrane protein; interacts and functions with Brr6p and Brl1p in lipid homeostasis; mutants are defective in nuclear pore complex biogenesis, nuclear envelope morphology, mRNA export from the nucleus and are sensitive to sterol biosynthesis inhibitors and membrane fluidizing agents; exhibits synthetic lethal genetic interactions with genes involved in lipid metabolism","termid":"PBO:0085085"}


id: GO:0044464
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a cell, the basic structural and functional unit of all organisms.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cell part (obsolete GO:0044464)","synonyms":[{"name":"cellular subcomponent","type":"exact"},{"name":"protoplast","type":"related"}],"termid":"GO:0044464"}


id: GO:0102428
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: kaempferol 3-O-glucoside + UDP-alpha-D-glucose = kaempferol-3-gentiobioside + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete kaempferol-3-O-glucoside 1,6-glucosyltransferase activity (obsolete GO:0102428)","termid":"GO:0102428"}


id: MONDO:0001262
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An disease or disorder caused by infection with Histoplasma capsulatum var. duboisii.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Histoplasma capsulatum infectious disease","termid":"MONDO:0002099"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"African histoplasmosis","secondary_identifiers":["MEDGEN:526120","ICD9:115.10","SCTID:78511005","UMLS:C0220977","DOID:11315","ICD10CM:B39.5"],"synonyms":[{"name":"African histoplasmosis","type":"exact"},{"name":"Histoplasma capsulatum var. duboisii caused disease or disorder","type":"exact"},{"name":"Histoplasma capsulatum var. duboisii disease or disorder","type":"exact"},{"name":"Histoplasma capsulatum var. duboisii infectious disease","type":"exact"},{"name":"Histoplasma duboisii infection","type":"related"},{"name":"infection by Histoplasma duboisii","type":"related"},{"name":"large form histoplasmosis","type":"related"}],"termid":"MONDO:0001262","xrefs":{"Monarch":{"xref_id":"0001262"}}}


id: PBO:0062018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily L member 9 pseudogene","termid":"PBO:0062018"}


id: PBO:0091513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin fold protein Plp1","termid":"PBO:0091513"}


id: GO:0018117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of an adenylyl group (adenosine 5'-monophosphate; AMP) to a protein amino acid.","definition_xrefs":["GOC:sart","GOC:ai","GOC:jsg","PMID:21607083"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein nucleotidylation","termid":"GO:0018175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein adenylylation","secondary_identifiers":["GO:0018176"],"synonyms":[{"name":"protein AMPylation","type":"exact"},{"name":"protein adenylation","type":"exact"},{"name":"protein amino acid adenylylation","type":"exact"}],"termid":"GO:0018117"}


id: PBO:0052839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 2-4","termid":"PBO:0052839"}


id: MONDO:0037821
data:
  {"annotated_genes":["SJAG_05283","SJAG_02896","SJAG_03011","SJAG_03961","SJAG_05194","SJAG_02876","SJAG_01344","SJAG_03363","SJAG_03785","SJAG_04109","SJAG_01372","SJAG_01841","SJAG_05213","SJAG_00938","SJAG_04944"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87099],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008294"},{"annotations":[88324],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008822"},{"annotations":[88584],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011559"},{"annotations":[88782,88783],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030810"},{"annotations":[87660],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0031040"},{"annotations":[87243],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009902"},{"annotations":[87087,87089,87088],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009380"},{"annotations":[87499],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008296"},{"annotations":[87198],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030048"},{"annotations":[87652],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007369"},{"annotations":[87244],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013000"},{"annotations":[88714],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011156"},{"annotations":[87325],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011214"},{"annotations":[86935],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008319"},{"annotations":[87518],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008297"},{"annotations":[88170],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957577"},{"annotations":[88514],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010420"},{"annotations":[88512],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020721"}]},"cv_name":"mondo","definition":"A disease that has its basis in the disruption of porphyrin-containing compound metabolic process.","definition_xrefs":["MONDO:patterns/basis_in_disruption_of_process"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease","termid":"MONDO:0005066"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_01344":null,"SJAG_01372":null,"SJAG_01841":null,"SJAG_02876":null,"SJAG_02896":null,"SJAG_03011":null,"SJAG_03363":null,"SJAG_03785":null,"SJAG_03961":null,"SJAG_04109":null,"SJAG_04944":null,"SJAG_05194":null,"SJAG_05213":null,"SJAG_05283":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"porphyrin metabolism disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:277.1","MEDGEN:10865","UMLS:C0032708","SCTID:29094004"],"synonyms":[{"name":"disorder of porphyrin and heme metabolism","type":"related"},{"name":"disorder of porphyrin metabolism","type":"exact"},{"name":"disorder of porphyrin-containing compound metabolic process","type":"exact"},{"name":"porphyrin-containing compound metabolic process disease","type":"exact"}],"termid":"MONDO:0037821","terms_by_termid":{"MONDO:0007369":null,"MONDO:0008294":null,"MONDO:0008296":null,"MONDO:0008297":null,"MONDO:0008319":null,"MONDO:0008822":null,"MONDO:0009380":null,"MONDO:0009902":null,"MONDO:0010420":null,"MONDO:0011156":null,"MONDO:0011214":null,"MONDO:0011559":null,"MONDO:0013000":null,"MONDO:0020721":null,"MONDO:0030048":null,"MONDO:0030810":null,"MONDO:0031040":null,"MONDO:0957577":null},"xrefs":{"Monarch":{"xref_id":"0037821"}}}


id: PBO:0055206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2631","termid":"PBO:0055206"}


id: PBO:0058058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4279","termid":"PBO:0058058"}


id: MONDO:0957254
data:
  {"annotated_genes":["SJAG_02564"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88341],"is_not":false,"summary":null,"term":"MONDO:0957254"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial proton-transporting ATP synthase complex deficiency","termid":"MONDO:0014471"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02564":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex V (ATP synthase) deficiency, nuclear type 4A","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0070461","OMIM:620358","UMLS:C5830480","MEDGEN:1841116"],"termid":"MONDO:0957254","terms_by_termid":{"MONDO:0957254":null},"xrefs":{"Monarch":{"xref_id":"0957254"}}}


id: PBO:0059585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylthioadenosine phosphorylase pseudogene 2","termid":"PBO:0059585"}


id: PBO:0031166
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_glutamate_import_during_vegetative_growth","termid":"PBO:0031166"}


id: PBO:0044198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin G","termid":"PBO:0044198"}


id: PBO:0005751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial tyrosine-tRNA ligase (predicted)","termid":"PBO:0005751"}


id: PBO:0079863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uracil DNA glycosylase","termid":"PBO:0079863"}


id: PBO:0081144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFP62 zinc finger protein","termid":"PBO:0081144"}


id: GO:0010143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cutin, a waxy substance, which combined with cellulose forms a substance nearly impervious to water and constituting the cuticle in plants.","definition_xrefs":["ISBN:0028623819"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"},{"relation_name":"part_of","term_name":"cutin-based cuticle development","termid":"GO:0160062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cutin biosynthetic process","secondary_identifiers":["MetaCyc:PWY-321"],"synonyms":[{"name":"cutin anabolism","type":"exact"},{"name":"cutin biosynthesis","type":"exact"},{"name":"cutin formation","type":"exact"},{"name":"cutin synthesis","type":"exact"}],"termid":"GO:0010143"}


id: GO:0086011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which ions are transported across a membrane such that the membrane potential changes in the direction from the positive membrane potential at the peak of the action potential towards the negative resting potential.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane repolarization","termid":"GO:0086009"},{"relation_name":"part_of","term_name":"action potential","termid":"GO:0001508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"membrane repolarization during action potential","termid":"GO:0086011"}


id: GO:0009941
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The double lipid bilayer enclosing the chloroplast and separating its contents from the rest of the cytoplasm; includes the intermembrane space.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid envelope","termid":"GO:0009526"},{"relation_name":"part_of","term_name":"chloroplast","termid":"GO:0009507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"chloroplast envelope","termid":"GO:0009941"}


id: PBO:0061275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH oxidase activator 1","termid":"PBO:0061275"}


id: PBO:0071007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 9","termid":"PBO:0071007"}


id: FYPO:0005066
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 in centromeric regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 methylation during vegetative growth","termid":"FYPO:0000871"},{"relation_name":"is_a","term_name":"abnormal histone methylation at centromere during vegetative growth","termid":"FYPO:0007374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0002494","FYPO:0001985","FYPO:0001320","FYPO:0002274"],"is_obsolete":false,"name":"increased histone H3-K9 methylation at centromere during vegetative growth","synonyms":[{"name":"increased histone H3 K9 methylation at centromere during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 methylation at centromere during mitotic cell cycle","type":"related"},{"name":"increased histone H3-K9 methylation at centromeric region during vegetative growth","type":"exact"},{"name":"increased histone H3K9 methylation at centromere during vegetative growth","type":"exact"},{"name":"increased histone H3K9me at centromere during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 methylation at centromere during vegetative growth","type":"exact"}],"termid":"FYPO:0005066"}


id: GO:0005324
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a long-chain fatty acid from one side of a membrane to the other. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid transmembrane transporter activity","termid":"GO:0015245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"long-chain fatty acid transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-2046087","Reactome:R-HSA-434381","RHEA:39283","Reactome:R-HSA-2046093","GO:0005325","Reactome:R-HSA-382575","GO:0008562","Reactome:R-HSA-5684043"],"synonyms":[{"name":"long-chain fatty acid transporter activity","type":"related"}],"termid":"GO:0005324"}


id: GO:0035148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Creation of the central hole of a tube in an anatomical structure through which gases and/or liquids flow.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"tube morphogenesis","termid":"GO:0035239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tube formation","synonyms":[{"name":"lumen formation in an anatomical structure","type":"related"},{"name":"tube lumen formation","type":"exact"}],"termid":"GO:0035148"}


id: PBO:0114490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acetyl-coA synthetase isoform; along with Acs2p, acetyl-CoA synthetase isoform is the nuclear source of acetyl-coA for histone acetylation; expressed during growth on nonfermentable carbon sources and under aerobic conditions; metabolites mediate the formation of filament assemblies in meiotic cells, storing Acs1p in an inactive state and promoting efficient return to growth after starvation","termid":"PBO:0114490"}


id: MONDO:0011284
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Unequal curvature of the refractive surfaces of the eye. Thus a point source of light cannot be brought to a point focus on the retina but is spread over a more or less diffuse area. This results from the radius of curvature in one plane being longer or shorter than the radius at right angles to it. (Dorland, 27th ed)","definition_xrefs":["MESH:D001251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"refractive error","termid":"MONDO:0004892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"astigmatism","secondary_identifiers":["HP:0000483","ICD10CM:H52.2","CSP:1116-1831","ICD9:367.2","MEDGEN:2473","DOID:11782","OMIM:603047","icd11.foundation:402558626","ICD9:367.20","UMLS:C0004106","SCTID:82649003"],"synonyms":[{"name":"astigmatism","type":"exact"},{"name":"astigmatism (disease)","type":"exact"}],"termid":"MONDO:0011284","xrefs":{"Monarch":{"xref_id":"0011284"}}}


id: PBO:0071473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 14","termid":"PBO:0071473"}


id: PBO:0052129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel modifier subfamily G member 1","termid":"PBO:0052129"}


id: PBO:0029915
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_FPP_level","termid":"PBO:0029915"}


id: MONDO:0015212
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A intestinal malformation that is part of a larger syndrome.","definition_xrefs":["MONDO:patterns/syndromic"],"gene_count":0,"genotype_count":0,"name":"obsolete syndromic intestinal malformation (obsolete MONDO:0015212)","secondary_identifiers":["Orphanet:108969"],"synonyms":[{"name":"syndrome associated with intestinal malformation","type":"exact"},{"name":"syndromic intestinal malformation","type":"exact"}],"termid":"MONDO:0015212","xrefs":{"Monarch":{"xref_id":"0015212"}}}


id: FYPO:0007639
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of DNA damage measured at ribosomal DNA in a cell is greater than normal during G0 phase. The number, extent, or both of damage sites may be increased.","definition_xrefs":["PMID:27738016","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased DNA damage","termid":"FYPO:0003546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"increased DNA damage at rDNA during G0","synonyms":[{"name":"increased DNA damage at rDNA during cell quiescence","type":"exact"},{"name":"increased DNA damage at rDNA during quiescence","type":"exact"},{"name":"increased DNA damage at ribosomal DNA","type":"exact"}],"termid":"FYPO:0007639"}


id: PBO:0109134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRIPTO pseudogene 7","termid":"PBO:0109134"}


id: PBO:0067302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 387, pseudogene","termid":"PBO:0067302"}


id: MONDO:0032900
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with hypotonia and autistic features with or without hyperkinetic movements","secondary_identifiers":["OMIM:618760","UMLS:C5231491","MEDGEN:1684874"],"synonyms":[{"name":"NEDHAHM","type":"related"},{"name":"NEURODEVELOPMENTAL DISORDER WITH HYPOTONIA AND AUTISTIC FEATURES WITH OR WITHOUT HYPERKINETIC MOVEMENTS","type":"related"}],"termid":"MONDO:0032900","xrefs":{"Monarch":{"xref_id":"0032900"}}}


id: GO:0001715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell fate determination process that results in a cell becoming becomes capable of differentiating autonomously into an ectoderm cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate specification","termid":"GO:0001708"},{"relation_name":"part_of","term_name":"ectodermal cell fate commitment","termid":"GO:0001712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ectodermal cell fate specification","synonyms":[{"name":"ectoderm cell fate specification","type":"exact"}],"termid":"GO:0001715"}


id: GO:0050392
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-vicianin + H2O = mandelonitrile + vicianose.","definition_xrefs":["EC:3.2.1.119","RHEA:14041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucosidase activity","termid":"GO:0008422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0016798","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"vicianin beta-glucosidase activity","secondary_identifiers":["MetaCyc:VICIANIN-BETA-GLUCOSIDASE-RXN","KEGG_REACTION:R03642"],"synonyms":[{"name":"(R)-vicianin beta-D-glucohydrolase activity","type":"related"},{"name":"vicianin b-glucosidase activity","type":"exact"},{"name":"vicianin hydrolase activity","type":"related"}],"termid":"GO:0050392"}


id: GO:0003828
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CMP-N-acetylneuraminate + alpha-N-acetylneuraminyl-(2->3)-beta-D-galactosyl-R = CMP + alpha-N-acetylneuraminyl-(2->8)-alpha-N-acetylneuraminyl-(2->3)-beta-D-galactosyl-R.","definition_xrefs":["EC:2.4.3.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sialyltransferase activity","termid":"GO:0008373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity","secondary_identifiers":["MetaCyc:2.4.99.8-RXN","Reactome:R-HSA-422454","RHEA:19313","Reactome:R-HSA-1022133","Reactome:R-HSA-4084978","Reactome:R-HSA-9845587"],"synonyms":[{"name":"alpha-2,8-sialyltransferase activity","type":"related"},{"name":"alpha-N-acetylneuraminide alpha-2,8-sialyltransferase activity","type":"exact"},{"name":"cytidine monophosphoacetylneuraminate-ganglioside GM3","type":"related"},{"name":"ganglioside GD3 synthase activity","type":"related"},{"name":"ganglioside GD3 synthetase sialyltransferase activity","type":"related"}],"termid":"GO:0003828"}


id: MONDO:0019350
data:
  {"annotated_genes":["SJAG_01183"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87253],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012981"}]},"cv_name":"mondo","definition":"Hereditary spherocytosis is a congenital hemolytic anemia with a wide clinical spectrum (from symptom-free carriers to severe hemolysis) characterized by anemia, variable jaundice, splenomegaly and cholelithiasis.","definition_xrefs":["Orphanet:822"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hemolytic anemia","termid":"MONDO:0003689"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"hereditary spherocytosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NORD:777","NCIT:C97074","MEDGEN:52450","icd11.foundation:1305248013","MESH:D013103","SCTID:55995005","UMLS:C0037889","GARD:6639","NANDO:2200622","ICD10CM:D58.0","DOID:12971","ICD9:282.0","MedDRA:10019904"],"synonyms":[{"name":"Minkowski Chauffard syndrome","type":"exact"},{"name":"Minkowski-Chauffard disease","type":"exact"},{"name":"congenital spherocytic hemolytic anaemia","type":"exact"},{"name":"congenital spherocytic hemolytic anemia","type":"exact"},{"name":"congenital spherocytosis","type":"related"},{"name":"hereditary spherocytosis","type":"exact"},{"name":"spherocytic anaemia","type":"exact"},{"name":"spherocytic anemia","type":"exact"}],"termid":"MONDO:0019350","terms_by_termid":{"MONDO:0012981":null},"xrefs":{"Monarch":{"xref_id":"0019350"}}}


id: GO:0090144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the mitochondrial nucleoid. The mitochondrial nucleoid is the region of a mitochondrion to which the DNA is confined.","definition_xrefs":["GOC:ascb_2009","GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial nucleoid organization (obsolete GO:0090144)","termid":"GO:0090144"}


id: PBO:0085679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in promoting high level transcription of rDNA; subunit of UAF (upstream activation factor) for RNA polymerase I","termid":"PBO:0085679"}


id: GO:0051433
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a BH2 protein domain, present in Bcl-2 family members. Proteins that act as inhibitors of apoptosis harbour at least three BH domains: BH1, BH2 and BH3; the BH1 and BH2 domains are found in all death antagonists of the Bcl-2 family but only in one class of death agonists.","definition_xrefs":["PMID:9704409","PMID:11048732","PMID:12133724","Prosite:PS01258","PMID:9020082"],"direct_ancestors":[{"relation_name":"is_a","term_name":"BH domain binding","termid":"GO:0051400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"BH2 domain binding","termid":"GO:0051433"}


id: PBO:0051934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inter-alpha-trypsin inhibitor heavy chain 5","termid":"PBO:0051934"}


id: GO:0048248
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CXCR3 chemokine receptor.","definition_xrefs":["PMID:10556837","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CXCR chemokine receptor binding","termid":"GO:0045236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"CXCR3 chemokine receptor binding","termid":"GO:0048248"}


id: GO:0021977
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body in the superior colliculus of the midbrain towards target cells in the ventral spinal cord.","definition_xrefs":["GOC:cls","GOC:jid","GOC:dph","GOC:dgh","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system projection neuron axonogenesis","termid":"GO:0021952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tectospinal tract morphogenesis","termid":"GO:0021977"}


id: GO:1990380
data:
  {"annotated_genes":["SJAG_01481","SJAG_00644"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76395,113557],"is_not":false,"summary":null,"term":"GO:1990380"}]},"cv_name":"molecular_function","definition":"Hydrolysis of a ubiquitin unit from a ubiquitinated protein linked via the Lys48 residue of ubiquitin.","definition_xrefs":["GOC:PARL","GOC:bf","PMID:22970133"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deubiquitinase activity","termid":"GO:0101005"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00644":null,"SJAG_01481":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0003674","GO:0008233","GO:0016787"],"is_obsolete":false,"name":"K48-linked deubiquitinase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5690870","Reactome:R-HSA-9711058"],"synonyms":[{"name":"K48-specific deubiquitinase activity","type":"exact"},{"name":"K48-specific deubiquitinating activity","type":"exact"},{"name":"Lys48-specific deubiquitinase activity","type":"exact"}],"termid":"GO:1990380","terms_by_termid":{"GO:1990380":null}}


id: GO:0000140
data:
  {"annotated_genes":["SJAG_01036"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73230],"is_not":false,"summary":null,"term":"GO:0000140"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-hexadecanoyl-sn-glycero-3-phosphate + NADP+ = 1-hexadecanoylglycerone 3-phosphate + H+ + NADPH.","definition_xrefs":["RHEA:17341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01036":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"acylglycerone-phosphate reductase (NADP+) activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:ACYLGLYCERONE-PHOSPHATE-REDUCTASE-RXN","Reactome:R-HSA-75883","EC:1.1.1.101"],"synonyms":[{"name":"1-acyldihydroxyacetone-phosphate reductase activity","type":"exact"},{"name":"1-palmitoylglycerol-3-phosphate:NADP+ oxidoreductase activity","type":"related"},{"name":"acyldihydroxyacetone phosphate reductase activity","type":"related"},{"name":"palmitoyl dihydroxyacetone phosphate reductase activity","type":"related"},{"name":"palmitoyl-dihydroxyacetone-phosphate reductase activity","type":"related"},{"name":"palmitoyldihydroxyacetone-phosphate reductase activity","type":"related"}],"termid":"GO:0000140","terms_by_termid":{"GO:0000140":null}}


id: MONDO:0001701
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An anthrax disease that results in infection located in mucosa of gastrointestinal tract, has material basis in Bacillus anthracis, which is transmitted by ingestion of anthrax-infected meat. The infection has symptom lesions, has symptom vomiting of blood, has symptom severe diarrhea, has symptom loss of appetite.","definition_xrefs":["DOID:13386"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anthrax infection","termid":"MONDO:0005119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gastrointestinal anthrax","secondary_identifiers":["SCTID:111798006","UMLS:C0152945","ICD10CM:A22.2","ICD9:022.2","MEDGEN:102256","MESH:C571911","icd11.foundation:1800193089"],"termid":"MONDO:0001701","xrefs":{"Monarch":{"xref_id":"0001701"}}}


id: GO:2001309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of the epipolythiodioxopiperazine gliotoxin, a poisonous substance produced by some species of fungi.","definition_xrefs":["PMID:16333108","PMID:17574915","GOC:di","PMID:18272357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mycotoxin catabolic process","termid":"GO:0043387"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"detoxification of nitrogen compound","termid":"GO:0051410"},{"relation_name":"is_a","term_name":"gliotoxin metabolic process","termid":"GO:2001308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0098754","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"gliotoxin catabolic process","synonyms":[{"name":"gliotoxin breakdown","type":"exact"},{"name":"gliotoxin catabolism","type":"exact"},{"name":"gliotoxin degradation","type":"exact"}],"termid":"GO:2001309"}


id: PBO:0027777
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_actomyosin_contractile_ring_contraction","termid":"PBO:0027777"}


id: MONDO:0008383
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic, systemic autoimmune disorder characterized by inflammation in the synovial membranes and articular surfaces. It manifests primarily as a symmetric, erosive polyarthritis that spares the axial skeleton and is typically associated with the presence in the serum of rheumatoid factor.","definition_xrefs":["NCIT:C2884"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disorder of musculoskeletal system","termid":"MONDO:0000589"},{"relation_name":"is_a","term_name":"rheumatic disorder","termid":"MONDO:0005554"},{"relation_name":"is_a","term_name":"arthritic joint disease","termid":"MONDO:0005578"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"rheumatoid arthritis","secondary_identifiers":["HP:0001370","ICD9:714.0","Orphanet:284130","icd11.foundation:576319925","OMIM:180300","SCTID:69896004","MESH:D001172","DOID:7148","EFO:0000685","UMLS:C0003873","MEDGEN:2078"],"synonyms":[{"name":"RA","type":"exact"},{"name":"arthritis or polyarthritis, rheumatic","type":"exact"},{"name":"arthritis, rheumatoid","type":"exact"},{"name":"atrophic arthritis","type":"broad"},{"name":"autoimmune arthritis","type":"exact"},{"name":"rheumatoid arthritis","type":"exact"},{"name":"rheumatoid arthritis, progression of","type":"exact"},{"name":"rheumatoid arthritis, susceptibility to","type":"related"}],"termid":"MONDO:0008383","xrefs":{"Monarch":{"xref_id":"0008383"}}}


id: MONDO:0000343
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease caused by infection with Barmah Forest virus.","definition_xrefs":["MONDO:patterns/infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Alphavirus infectious disease","termid":"MONDO:0005643"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Barmah forest virus disease","secondary_identifiers":["DOID:0050517"],"synonyms":[{"name":"Barmah Forest virus caused disease or disorder","type":"exact"},{"name":"Barmah Forest virus disease or disorder","type":"exact"},{"name":"Barmah Forest virus infectious disease","type":"exact"}],"termid":"MONDO:0000343","xrefs":{"Monarch":{"xref_id":"0000343"}}}


id: PBO:0005095
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally represses per1","termid":"PBO:0005095"}


id: MONDO:0032011
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A disorder defined by a set of physiological abnormalities without clearly associated clinical manifestations. [Orphanet:377790]","definition_xrefs":["Orphanet:377790"],"gene_count":0,"genotype_count":0,"name":"obsolete biological anomaly (obsolete MONDO:0032011)","termid":"MONDO:0032011","xrefs":{"Monarch":{"xref_id":"0032011"}}}


id: MONDO:0005895
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A parasitic infection caused by trematodes of the Paragonimus genus. Humans are infected from ingestion of raw or undercooked food. It results in chronic lung infection and eosinophilia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"helminthiasis","termid":"MONDO:0004664"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paragonimiasis","secondary_identifiers":["NCIT:C84995","SCTID:30369007","DOID:10699","MESH:D010237","icd11.foundation:1422824299","UMLS:C0030424","ICD10CM:B66.4","MEDGEN:14603","EFO:0007418","GARD:9815","Orphanet:658913","ICD9:121.2"],"synonyms":[{"name":"Paragonimus westermani caused disease or disorder","type":"exact"},{"name":"Paragonimus westermani disease or disorder","type":"exact"},{"name":"Paragonimus westermani infection","type":"related"},{"name":"Paragonimus westermani infectious disease","type":"exact"},{"name":"infection by Paragonimus","type":"exact"},{"name":"lung fluke disease","type":"exact"},{"name":"lung fluke infection","type":"exact"},{"name":"pulmonary paragonimiasis","type":"exact"}],"termid":"MONDO:0005895","xrefs":{"Monarch":{"xref_id":"0005895"}}}


id: GO:1901914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of capsule organization.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"regulation of capsule organization","termid":"GO:1901913"},{"relation_name":"negatively_regulates","term_name":"capsule organization","termid":"GO:0045230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of capsule organization","synonyms":[{"name":"down regulation of capsule organisation","type":"exact"},{"name":"down regulation of capsule organization","type":"exact"},{"name":"down regulation of capsule organization and biogenesis","type":"related"},{"name":"down-regulation of capsule organisation","type":"exact"},{"name":"down-regulation of capsule organization","type":"exact"},{"name":"down-regulation of capsule organization and biogenesis","type":"related"},{"name":"downregulation of capsule organisation","type":"exact"},{"name":"downregulation of capsule organization","type":"exact"},{"name":"downregulation of capsule organization and biogenesis","type":"related"},{"name":"inhibition of capsule organisation","type":"narrow"},{"name":"inhibition of capsule organization","type":"narrow"},{"name":"inhibition of capsule organization and biogenesis","type":"related"},{"name":"negative regulation of capsule organisation","type":"exact"},{"name":"negative regulation of capsule organization and biogenesis","type":"related"}],"termid":"GO:1901914"}


id: _global:causal_relation_between_processes
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"p is causally related to q if and only if p or any part of p and q or any part of q are linked by a chain of events where each event pair is one where the execution of p influences the execution of q. p may be upstream, downstream, part of, or a container of q.","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_related_to","termid":"_global:causally_related_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causal_relation_between_processes","secondary_identifiers":["RO:0002501"],"termid":"_global:causal_relation_between_processes"}


id: MONDO:0016916
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete partial deletion of the long arm of chromosome 18 (obsolete MONDO:0016916)","termid":"MONDO:0016916","xrefs":{"Monarch":{"xref_id":"0016916"}}}


id: MONDO:0002895
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete dentinogenesis imperfecta (obsolete MONDO:0002895)","termid":"MONDO:0002895","xrefs":{"Monarch":{"xref_id":"0002895"}}}


id: PBO:0082391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta regulatory subunit of casein kinase 2 (CK2); a Ser/Thr protein kinase with roles in cell growth and proliferation; CK2, comprised of CKA1, CKA2, CKB1 and CKB2, has many substrates including transcription factors and all RNA polymerases","termid":"PBO:0082391"}


id: PATO:0000355
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000355 enzyme composition value (obsolete PATO:0000355)","termid":"PATO:0000355"}


id: GO:0036288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ximelagatran stimulus.","definition_xrefs":["GOC:hp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to ximelagatran","termid":"GO:0036288"}


id: PR:Q10411
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spo15 gene.","definition_xrefs":["UniProtKB:Q10411","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sporulation-specific protein 15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F3.06c","synonyms":[{"name":"Spom972h-spo15","type":"exact"}],"termid":"PR:Q10411"}


id: MONDO:1011928
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A respiratory disorder characterized by an inability to abduct the arytenoid cartilages during inspiration resulting in a partial to complete airway obstruction and consequent respiratory distress.","definition_xrefs":["PMID:31647804"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder, non-human animal","termid":"MONDO:0700104"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laryngeal paralysis, non-human animal","secondary_identifiers":["OMIA:001206"],"termid":"MONDO:1011928","xrefs":{"Monarch":{"xref_id":"1011928"}}}


id: GO:0046677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an antibiotic stimulus. An antibiotic is a chemical substance produced by a microorganism which has the capacity to inhibit the growth of or to kill other microorganisms.","definition_xrefs":["GOC:ai","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to antibiotic","secondary_identifiers":["Reactome:R-HSA-9639775"],"synonyms":[{"name":"antibiotic susceptibility/resistance","type":"related"}],"termid":"GO:0046677"}


id: PBO:0041266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C1q binding protein pseudogene 3","termid":"PBO:0041266"}


id: PBO:0049189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyoxylate and hydroxypyruvate reductase","termid":"PBO:0049189"}


id: GO:0047986
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + S(2-) = CoA + thioacetate.","definition_xrefs":["RHEA:16625","EC:2.3.1.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-acetyltransferase activity","termid":"GO:0016418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"hydrogen-sulfide S-acetyltransferase activity","secondary_identifiers":["MetaCyc:HYDROGEN-SULFIDE-S-ACETYLTRANSFERASE-RXN","KEGG_REACTION:R01850"],"synonyms":[{"name":"acetyl-CoA:hydrogen-sulfide S-acetyltransferase activity","type":"related"},{"name":"hydrogen-sulfide acetyltransferase activity","type":"related"},{"name":"hydrogen-sulphide S-acetyltransferase activity","type":"exact"}],"termid":"GO:0047986"}


id: PBO:0112791
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphate Quality Regulator","termid":"PBO:0112791"}


id: PBO:0049407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylyl cyclase domain containing 1","termid":"PBO:0049407"}


id: PBO:0075169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein D3 polypeptide","termid":"PBO:0075169"}


id: RO:0002616
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"related_via_evidence_or_inference_to","termid":"RO:0002616"}


id: MONDO:0042975
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pseudoachondroplastic dysplasia 2 (obsolete MONDO:0042975)","secondary_identifiers":["OMIM:264150","GARD:4542","MESH:C535820"],"synonyms":[{"name":"pseudoachondroplastic dysplasia 2","type":"exact"},{"name":"recessive pseudoachondroplasia","type":"related"},{"name":"spondyloepiphyseal dysplasia pseudoachondroplastic 2","type":"related"}],"termid":"MONDO:0042975","xrefs":{"Monarch":{"xref_id":"0042975"}}}


id: GO:0032700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of production of any member of the interleukin-17 family of cytokines.","definition_xrefs":["PMID:16482511","GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-17 production","termid":"GO:0032660"},{"relation_name":"negatively_regulates","term_name":"interleukin-17 production","termid":"GO:0032620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of interleukin-17 production","secondary_identifiers":["GO:1905077","GO:0045379"],"synonyms":[{"name":"down regulation of interleukin-17 production","type":"exact"},{"name":"downregulation of interleukin-17 production","type":"exact"},{"name":"inhibition of interleukin-17 production","type":"narrow"},{"name":"negative regulation of CTLA-8 production","type":"narrow"},{"name":"negative regulation of Cytotoxic T-lymphocyte-associated antigen 8 secretion","type":"exact"},{"name":"negative regulation of IL-17 production","type":"exact"},{"name":"negative regulation of interleukin-17 biosynthetic process","type":"narrow"},{"name":"negative regulation of interleukin-17 secretion","type":"narrow"}],"termid":"GO:0032700"}


id: PBO:0052657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 25","termid":"PBO:0052657"}


id: MONDO:0007090
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amastia, bilateral, with ureteral triplication and dysmorphism","secondary_identifiers":["OMIM:104350","MEDGEN:354882","MESH:C566295","UMLS:C1863015"],"synonyms":[{"name":"amastia, bilateral, with ureteral triplication and dysmorphism","type":"exact"}],"termid":"MONDO:0007090","xrefs":{"Monarch":{"xref_id":"0007090"}}}


id: MONDO:0024419
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation at the site of insertion of ligaments, tendons, and other fibrous structures into bone.","definition_xrefs":["NCIT:C114470"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enthesopathy","termid":"MONDO:0002183"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enthesitis","secondary_identifiers":["SCTID:359643005","MEDGEN:451081","UMLS:C1282952"],"synonyms":[{"name":"enthesis inflammation","type":"exact"},{"name":"enthesitis","type":"exact"},{"name":"inflammation of enthesis","type":"exact"},{"name":"inflammatory enthesopathy","type":"exact"}],"termid":"MONDO:0024419","xrefs":{"Monarch":{"xref_id":"0024419"}}}


id: GO:0043805
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (indol-3-yl)pyruvate + CoA + oxidized ferredoxin = S-2-(indol-3-yl)acetyl-CoA + CO2 + reduced ferredoxin.","definition_xrefs":["EC:1.2.7.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor","termid":"GO:0016625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"indolepyruvate ferredoxin oxidoreductase activity","secondary_identifiers":["MetaCyc:1.2.7.8-RXN","RHEA:12645"],"synonyms":[{"name":"3-(indol-3-yl)pyruvate synthase (ferredoxin) activity","type":"related"},{"name":"3-(indol-3-yl)pyruvate:ferredoxin oxidoreductase (decarboxylating, CoA-indole-acetylating)","type":"related"},{"name":"IOR","type":"related"},{"name":"indolepyruvate oxidoreductase activity","type":"related"}],"termid":"GO:0043805"}


id: MONDO:0014165
data:
  {"annotated_genes":["SJAG_00846"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87743],"is_not":false,"summary":null,"term":"MONDO:0014165"}]},"cv_name":"mondo","definition":"A rare congenital disorder of glycosylation characterized by neonatal hypotonia, global development delay, developmental regress and severe to profound intellectual disability, infantile onset seizures that are initially associated with febrile episodes with subsequent transition to unprovoked seizures, impaired vision with esotropia and nystagmus, progressive cerebral and cerebellar atrophy, skeletal abnormalities (including brachycephaly, scoliosis, slender long bones, delayed bone age, pectus excavatum and osteopenia), inverted nipples and dysmorphic features including high and narrow forehead, frontal bossing, short nose, depressed nasal bridge, anteverted nares, high palate and wide open mouth consistent with facial hypotonia. Other features may include cardiac abnormalities (such as patent ductus arteriosus, atrial septal defects), urogenital abnormalities (such as nephrocalcinosis, urolithiasis), and low plasma concentration of alkaline phosphatase.","definition_xrefs":["Orphanet:369837"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"obsolete slender bone dysplasia (obsolete MONDO:0019699)","termid":"MONDO:0019699"},{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"},{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"inborn disorder of glycosphingolipid and glycosylphosphatidylinositol anchor glycosylation","termid":"MONDO:0017748"},{"relation_name":"is_a","term_name":"multiple congenital anomalies-hypotonia-seizures syndrome","termid":"MONDO:0100247"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00846":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"multiple congenital anomalies-hypotonia-seizures syndrome 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:615398","MESH:C566367","MEDGEN:815686","OMIM:603530","UMLS:C3809356","DOID:0080140","GARD:17584"],"synonyms":[{"name":"LFSS","type":"exact"},{"name":"M syndrome","type":"related"},{"name":"MCAHS type 3","type":"exact"},{"name":"MCAHS3","type":"related"},{"name":"PIGT multiple congenital anomalies/dysmorphic syndrome-intellectual disability","type":"exact"},{"name":"PIGT-CDG","type":"exact"},{"name":"congenital disorder of glycosylation due to PIGT deficiency","type":"exact"},{"name":"glycosylphosphatidylinositol biosynthesis defect 7","type":"related"},{"name":"intellectual disability-seizures-hypotonia-ophthalmologic-skeletal anomalies syndrome","type":"related"},{"name":"light fixation seizure syndrome","type":"exact"},{"name":"multiple congenital anomalies-hypotonia-seizures syndrome 3","type":"exact"},{"name":"multiple congenital anomalies-hypotonia-seizures syndrome type 3","type":"exact"},{"name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability caused by mutation in PIGT","type":"exact"}],"termid":"MONDO:0014165","terms_by_termid":{"MONDO:0014165":null},"xrefs":{"Monarch":{"xref_id":"0014165"}}}


id: FYPO:0005742
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of invertase activity (beta-fructofuranosidase activity) is decreased under conditions of glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal invertase activity","termid":"FYPO:0005741"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000652","FYPO:0001985","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"decreased invertase activity during glucose starvation","synonyms":[{"name":"decreased beta-fructofuranosidase activity during glucose starvation","type":"exact"},{"name":"decreased invertase activity during cellular response to glucose starvation","type":"exact"},{"name":"decreased invertase activity during glucose depletion","type":"exact"},{"name":"decreased invertase activity during glucose deprivation","type":"exact"},{"name":"decreased invertase activity during glucose limitation","type":"related"},{"name":"reduced invertase activity during glucose starvation","type":"exact"}],"termid":"FYPO:0005742"}


id: GO:1904515
data:
  {"annotated_genes":["SJAG_00143","SJAG_05030","SJAG_06588"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93008,99561,108829],"is_not":false,"summary":null,"term":"GO:1904515"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of TORC2 signaling.","definition_xrefs":["PMID:25590601","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of TOR signaling","termid":"GO:0032008"},{"relation_name":"is_a","term_name":"regulation of TORC2 signaling","termid":"GO:1903939"},{"relation_name":"positively_regulates","term_name":"TORC2 signaling","termid":"GO:0038203"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00143":null,"SJAG_05030":null,"SJAG_06588":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of TORC2 signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of TORC2 signal transduction","type":"narrow"},{"name":"activation of TORC2 signaling","type":"narrow"},{"name":"positive regulation of TORC2 signal transduction","type":"exact"},{"name":"up regulation of TORC2 signal transduction","type":"exact"},{"name":"up regulation of TORC2 signaling","type":"exact"},{"name":"up-regulation of TORC2 signal transduction","type":"exact"},{"name":"up-regulation of TORC2 signaling","type":"exact"},{"name":"upregulation of TORC2 signal transduction","type":"exact"},{"name":"upregulation of TORC2 signaling","type":"exact"}],"termid":"GO:1904515","terms_by_termid":{"GO:1904515":null}}


id: PBO:0030977
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K9_dimethylation_at_centromere_inner_repeat","termid":"PBO:0030977"}


id: MONDO:0001587
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete mucopolysaccharidosis type 4 (obsolete MONDO:0001587)","termid":"MONDO:0001587","xrefs":{"Monarch":{"xref_id":"0001587"}}}


id: PBO:0028803
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_replication_fork_arrest_at_mating-type_locus","termid":"PBO:0028803"}


id: GO:1904772
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a tetrachloromethane stimulus.","definition_xrefs":["PMID:7852267","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to tetrachloromethane","synonyms":[{"name":"response to CCL4","type":"exact"},{"name":"response to carbon tetrachloride","type":"exact"}],"termid":"GO:1904772"}


id: GO:0036169
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-methoxy-4-hydroxy-5-decaprenylbenzoic acid -> 2-methoxy-6-decaprenylphenol + CO2.","definition_xrefs":["GOC:mw","PMID:620805","PMID:7028108"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-methoxy-4-hydroxy-5-decaprenylbenzoic acid decarboxylase activity (obsolete GO:0036169)","termid":"GO:0036169"}


id: MONDO:0005047
data:
  {"annotated_genes":["SJAG_01941","SJAG_00666","SJAG_02954","SJAG_04950","SJAG_03051","SJAG_03867","SJAG_02339","SJAG_04114","SJAG_04758","SJAG_03286","SJAG_03635","SJAG_02690","SJAG_04663","SJAG_04738","SJAG_03418","SJAG_01837","SJAG_02006","SJAG_00786","SJAG_04324","SJAG_05196","SJAG_04176","SJAG_04280","SJAG_04682","SJAG_04003","SJAG_02463","SJAG_02223","SJAG_02500","SJAG_03698","SJAG_02643","SJAG_00663","SJAG_02294","SJAG_03720","SJAG_00377","SJAG_04703","SJAG_07002","SJAG_02439","SJAG_02035","SJAG_00103","SJAG_01680","SJAG_04148","SJAG_01465","SJAG_03854"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87188],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008840"},{"annotations":[87746],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009258"},{"annotations":[87377],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030925"},{"annotations":[87372],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859330"},{"annotations":[88368],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859521"},{"annotations":[87717],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0021573"},{"annotations":[87812,87811],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020837"},{"annotations":[87833],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957961"},{"annotations":[88756],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030736"},{"annotations":[87420],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013689"},{"annotations":[88185],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054850"},{"annotations":[89015],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013972"},{"annotations":[87790],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014126"},{"annotations":[86827],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0976232"},{"annotations":[87406],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014843"},{"annotations":[88202,88203],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054862"},{"annotations":[87491],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030870"},{"annotations":[87899],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958035"},{"annotations":[88818],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010350"},{"annotations":[88390,88391],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014321"},{"annotations":[89026],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013901"},{"annotations":[89001],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014961"},{"annotations":[87169],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054725"},{"annotations":[86997],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054726"},{"annotations":[88195,88194],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054732"},{"annotations":[88605,88604],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011720"},{"annotations":[86948],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009461"},{"annotations":[87496],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030869"},{"annotations":[87864,87865],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030507"},{"annotations":[87882],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030515"},{"annotations":[88900],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030733"},{"annotations":[88752],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030787"},{"annotations":[87751],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024773"},{"annotations":[87803,87801,87802],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0976123"},{"annotations":[87772,87767,87770,87771,87768,87766,87769],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010767"}]},"cv_name":"mondo","definition":"Inability to conceive for at least one year after trying and having unprotected sex. Causes of female infertility include endometriosis, fallopian tubes obstruction, and polycystic ovary syndrome. Causes of male infertility include abnormal sperm production or function, blockage of the epididymis, blockage of the ejaculatory ducts, hypospadias, exposure to pesticides, and health related issues.","definition_xrefs":["NCIT:C3836"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive system disorder","termid":"MONDO:0005039"}],"gene_count":42,"genes_by_uniquename":{"SJAG_00103":null,"SJAG_00377":null,"SJAG_00663":null,"SJAG_00666":null,"SJAG_00786":null,"SJAG_01465":null,"SJAG_01680":null,"SJAG_01837":null,"SJAG_01941":null,"SJAG_02006":null,"SJAG_02035":null,"SJAG_02223":null,"SJAG_02294":null,"SJAG_02339":null,"SJAG_02439":null,"SJAG_02463":null,"SJAG_02500":null,"SJAG_02643":null,"SJAG_02690":null,"SJAG_02954":null,"SJAG_03051":null,"SJAG_03286":null,"SJAG_03418":null,"SJAG_03635":null,"SJAG_03698":null,"SJAG_03720":null,"SJAG_03854":null,"SJAG_03867":null,"SJAG_04003":null,"SJAG_04114":null,"SJAG_04148":null,"SJAG_04176":null,"SJAG_04280":null,"SJAG_04324":null,"SJAG_04663":null,"SJAG_04682":null,"SJAG_04703":null,"SJAG_04738":null,"SJAG_04758":null,"SJAG_04950":null,"SJAG_05196":null,"SJAG_07002":null},"genotype_count":0,"in_subsets":["pombe_mondo_slim"],"is_obsolete":false,"name":"infertility disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["EFO:0000545","DOID:5223","MESH:D007246","MEDGEN:43876","UMLS:C0021359"],"synonyms":[{"name":"Sterile","type":"exact"},{"name":"fertility disorders","type":"exact"},{"name":"infertile","type":"exact"},{"name":"infertility","type":"related"},{"name":"sterile","type":"exact"},{"name":"sterility","type":"exact"}],"termid":"MONDO:0005047","terms_by_termid":{"MONDO:0008840":null,"MONDO:0009258":null,"MONDO:0009461":null,"MONDO:0010350":null,"MONDO:0010767":null,"MONDO:0011720":null,"MONDO:0013689":null,"MONDO:0013901":null,"MONDO:0013972":null,"MONDO:0014126":null,"MONDO:0014321":null,"MONDO:0014843":null,"MONDO:0014961":null,"MONDO:0020837":null,"MONDO:0021573":null,"MONDO:0024773":null,"MONDO:0030507":null,"MONDO:0030515":null,"MONDO:0030733":null,"MONDO:0030736":null,"MONDO:0030787":null,"MONDO:0030869":null,"MONDO:0030870":null,"MONDO:0030925":null,"MONDO:0054725":null,"MONDO:0054726":null,"MONDO:0054732":null,"MONDO:0054850":null,"MONDO:0054862":null,"MONDO:0859330":null,"MONDO:0859521":null,"MONDO:0957961":null,"MONDO:0958035":null,"MONDO:0976123":null,"MONDO:0976232":null},"xrefs":{"Monarch":{"xref_id":"0005047"}}}


id: GO:1904902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an ESCRT III complex.","definition_xrefs":["PMID:20588296","GOC:PARL","GOC:pad","GOC:TermGenie","GO_REF:0000079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ESCRT complex assembly","termid":"GO:1904895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"ESCRT III complex assembly","synonyms":[{"name":"ESCRT III complex formation","type":"exact"}],"termid":"GO:1904902"}


id: PBO:0031448
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_phosphorylation_during_vegetative_growth","termid":"PBO:0031448"}


id: FYPO:0004604
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at subtelomeric regions is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing at subtelomere","termid":"FYPO:0000169"},{"relation_name":"is_a","term_name":"decreased chromatin silencing","termid":"FYPO:0002353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0006551","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased chromatin silencing at subtelomere","secondary_identifiers":["FYPO:0003880"],"synonyms":[{"name":"decreased chromatin silencing at subtelomere during mitotic cell cycle","type":"related"},{"name":"decreased chromatin silencing at subtelomere during vegetative growth","type":"exact"},{"name":"decreased chromatin silencing at telomere","type":"related"},{"name":"reduced chromatin silencing at subtelomere","type":"exact"}],"termid":"FYPO:0004604"}


id: MONDO:0015050
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, congenital, non-syndromic esophageal malformation, most frequently located in the distal esophagus and usually diagnosed in childhood, characterized by tubular or spherical cystic masses that have a double layer of surrounding smooth muscle lined with squamous or enteric epithelium, are continuous or contiguous to the esophagus and may, or may not, communicate with the esophageal lumen. Patients are frequently asymptomatic, or could present with a wide range of symptoms including respiratory distress, failure to thrive, dysphagia, epigastric discomfort, vomiting, stridor, non-productive cough, and chest pain. Other more rare symptoms, such as cardiac arrhythmia, thoracic back pain, cystic hemorrgage and ulceration, and mediastinitis, have also been reported.","definition_xrefs":["Orphanet:100047"],"direct_ancestors":[{"relation_name":"is_a","term_name":"esophageal disorder","termid":"MONDO:0003749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"esophageal duplication cyst","secondary_identifiers":["GARD:19744","SCTID:721161005","UMLS:C4303524","MEDGEN:929193"],"termid":"MONDO:0015050","xrefs":{"Monarch":{"xref_id":"0015050"}}}


id: MONDO:0005755
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Viral disease of horses caused by the equine infectious anemia virus (eiav; infectious anemia virus, equine). It is characterized by intermittent fever, weakness, and anemia. Chronic infection consists of acute episodes with remissions.","definition_xrefs":["MESH:D004859"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease, non-human animal","termid":"MONDO:0700053"},{"relation_name":"is_a","term_name":"equine neoplasm","termid":"MONDO:0700170"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"equine infectious anemia","secondary_identifiers":["NCIT:C84694","EFO:0007263"],"termid":"MONDO:0005755","xrefs":{"Monarch":{"xref_id":"0005755"}}}


id: GO:0045864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving pteridine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of metabolic process","termid":"GO:0009893"},{"relation_name":"is_a","term_name":"regulation of pteridine metabolic process","termid":"GO:0042068"},{"relation_name":"positively_regulates","term_name":"pteridine metabolic process","termid":"GO:0019889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of pteridine metabolic process","synonyms":[{"name":"activation of pteridine metabolic process","type":"narrow"},{"name":"positive regulation of pteridine metabolism","type":"exact"},{"name":"stimulation of pteridine metabolic process","type":"narrow"},{"name":"up regulation of pteridine metabolic process","type":"exact"},{"name":"up-regulation of pteridine metabolic process","type":"exact"},{"name":"upregulation of pteridine metabolic process","type":"exact"}],"termid":"GO:0045864"}


id: MONDO:0021895
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A common disorder noted with jaw movement. It may be caused by malocclusion, repetitive use injury, trauma or arthritis. It is more prevalent among females between their second and fourth decades. Clinical signs include preauricular pain, temporomandibular joint clicking (as the mandibular condyle slips from the articulation made with the capsular disk and temporal bone) and restriction of jaw motion. Clinical course is typically benign but may progress to associated headaches, ear and neck pain, tinnitus and dislocation of temporomandibular joint. Prognosis is favorable as a majority of cases will respond to conservative management.","definition_xrefs":["NCIT:C35066"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"temporomandibular joint disorder","termid":"MONDO:0005473"},{"relation_name":"is_a","term_name":"myofascial pain syndrome","termid":"MONDO:0006862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"temporomandibular joint dysfunction syndrome","secondary_identifiers":["MESH:D013706","MEDGEN:21093","UMLS:C0039496"],"synonyms":[{"name":"Costen Syndrome","type":"related"},{"name":"Costen's Syndrome","type":"related"},{"name":"Costen's complex","type":"related"},{"name":"Costen's syndrome","type":"related"},{"name":"Costens Syndrome","type":"related"},{"name":"Joint Syndrome, Temporomandibular","type":"related"},{"name":"Mandibular dysfunction","type":"related"},{"name":"Myofascial Pain Dysfunction Syndrome, Temporomandibular Joint","type":"related"},{"name":"Myofascial pain - dysfunction syndrome of TMJ","type":"related"},{"name":"Snapping jaw","type":"related"},{"name":"Syndrome, Costen's","type":"related"},{"name":"Syndrome, TMJ","type":"related"},{"name":"Syndrome, Temporomandibular Joint","type":"related"},{"name":"TMJ Syndrome","type":"related"},{"name":"TMJ syndrome","type":"related"},{"name":"TMJPDS - Temporomandibular joint pain dysfunction syndrome","type":"related"},{"name":"Temporomandibular Joint Dysfunction Syndrome","type":"related"},{"name":"Temporomandibular Joint Syndrome","type":"related"},{"name":"Temporomandibular joint pain dysfunction syndrome","type":"related"},{"name":"Temporomandibular joint syndrome","type":"related"},{"name":"Temporomandibular joint-pain-dysfunction syndrome","type":"related"},{"name":"temporomandibular joint dysfunction syndrome","type":"exact"}],"termid":"MONDO:0021895","xrefs":{"Monarch":{"xref_id":"0021895"}}}


id: PBO:0078856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRPC6 pseudogene 4","termid":"PBO:0078856"}


id: PBO:0060599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-SMC condensin I complex subunit G","termid":"PBO:0060599"}


id: GO:1901655
data:
  {"annotated_genes":["SJAG_01596","SJAG_04726","SJAG_04404","SJAG_02960","SJAG_04674","SJAG_02106","SJAG_02988"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61740,74579,76209,104618],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0019243"},{"annotations":[61490,59690,106881],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061727"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ketone stimulus.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01596":null,"SJAG_02106":null,"SJAG_02960":null,"SJAG_02988":null,"SJAG_04404":null,"SJAG_04674":null,"SJAG_04726":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to ketone","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:1901655","terms_by_termid":{"GO:0019243":null,"GO:0061727":null}}


id: MONDO:0024634
data:
  {"annotated_genes":["SJAG_02226","SJAG_01082","SJAG_00980","SJAG_02187","SJAG_02748","SJAG_04394","SJAG_01620","SJAG_02231","SJAG_01837","SJAG_04206","SJAG_04699","SJAG_03453","SJAG_02426"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88269,88267,88272,88266,88268,88273,89147,88270,88271],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0005575"},{"annotations":[88158],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007356"},{"annotations":[86973],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012249"},{"annotations":[87423],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013699"},{"annotations":[87425],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013710"},{"annotations":[87435,87436],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008018"}]},"cv_name":"mondo","definition":"A disease that involves the large intestine.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00980":null,"SJAG_01082":null,"SJAG_01620":null,"SJAG_01837":null,"SJAG_02187":null,"SJAG_02226":null,"SJAG_02231":null,"SJAG_02426":null,"SJAG_02748":null,"SJAG_03453":null,"SJAG_04206":null,"SJAG_04394":null,"SJAG_04699":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"large intestine disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0341321","MEDGEN:574315","SCTID:119523007"],"synonyms":[{"name":"disease of large intestine","type":"exact"},{"name":"disease or disorder of large intestine","type":"exact"},{"name":"disorder of large intestine","type":"exact"},{"name":"large intestine disease or disorder","type":"exact"}],"termid":"MONDO:0024634","terms_by_termid":{"MONDO:0005575":null,"MONDO:0007356":null,"MONDO:0008018":null,"MONDO:0012249":null,"MONDO:0013699":null,"MONDO:0013710":null},"xrefs":{"Monarch":{"xref_id":"0024634"}}}


id: PBO:0082882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cyanamide hydratase that detoxifies cyanamide; member of the HD domain metalloprotein superfamily; expression is induced over 100-fold by cyanamide and by SN2-type DNA alkylating agents such as MMS and DMA; induction decreased in rad6 and rad18 mutants; gene and protein are identical to DDI3 and Ddi3p","termid":"PBO:0082882"}


id: FYPO:0005476
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of filamentous actin measured the cell is lower than normal when the cell is in the vegetative growth phase of the life cycle. The total actin level (globular and filamentous actin) may be normal or abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased filamentous actin level","synonyms":[{"name":"decreased accumulation of filamentous actin in cell","type":"related"},{"name":"decreased cellular F-actin level","type":"exact"},{"name":"decreased cellular filamentous actin level","type":"exact"},{"name":"decreased filamentous actin level during mitotic cell cycle","type":"related"},{"name":"decreased filamentous actin level during vegetative growth","type":"exact"},{"name":"reduced filamentous actin level","type":"exact"}],"termid":"FYPO:0005476"}


id: GO:0070178
data:
  {"annotated_genes":["SJAG_04827"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80695],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036088"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving D-serine, the D-enantiomer of serine, i.e. (2R)-2-amino-3-hydroxypropanoic acid.","definition_xrefs":["CHEBI:16523","GOC:mah","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-amino acid metabolic process","termid":"GO:0046416"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04827":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"D-serine metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"D-serine metabolism","type":"exact"}],"termid":"GO:0070178","terms_by_termid":{"GO:0036088":null}}


id: PBO:0063142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate and testis expressed 2","termid":"PBO:0063142"}


id: MONDO:0002072
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare neoplasm usually occurring in infants. It is characterized by the presence of a mixture of melanin-containing epithelial cells and smaller neuroblast-like cells. It may involve the skull and facial bones, or the epididymis. It usually has a benign clinical course.","definition_xrefs":["NCIT:C3717"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"bone benign neoplasm","termid":"MONDO:0000631"},{"relation_name":"is_a","term_name":"primitive neuroectodermal tumor","termid":"MONDO:0005462"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanotic neuroectodermal tumor","secondary_identifiers":["DOID:166","ICDO:9363/0","MESH:D017600","SCTID:404042005","MEDGEN:60073","UMLS:C0206094"],"synonyms":[{"name":"MNTI","type":"exact"},{"name":"infantile melanotic neuroectodermal neoplasm","type":"exact"},{"name":"melanotic Progonoma","type":"exact"},{"name":"melanotic neuroectodermal tumor (morphologic abnormality)","type":"exact"},{"name":"melanotic neuroectodermal tumor of infancy","type":"exact"},{"name":"melanotic neuroectodermal tumor of infancy (morphologic abnormality)","type":"exact"},{"name":"melanotic neuroectodermal tumour (morphologic abnormality)","type":"exact"},{"name":"melanotic neuroectodermal tumour of infancy","type":"exact"},{"name":"melanotic neuroectodermal tumour of infancy (morphologic abnormality)","type":"exact"},{"name":"pigmented neuroectodermal tumor","type":"exact"},{"name":"pigmented neuroectodermal tumor of infancy","type":"exact"},{"name":"pigmented neuroectodermal tumour","type":"exact"},{"name":"pigmented neuroectodermal tumour of infancy","type":"exact"},{"name":"retinal anlage neoplasm","type":"exact"}],"termid":"MONDO:0002072","xrefs":{"Monarch":{"xref_id":"0002072"}}}


id: PBO:0042203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin G2 pseudogene 1","termid":"PBO:0042203"}


id: PBO:0001649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Taz1 interacting factor 1, autophagy protein","termid":"PBO:0001649"}


id: MONDO:0800200
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"distal arthrogryposis","termid":"MONDO:0019942"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arthrogryposis, distal, type 2B4","secondary_identifiers":["UMLS:C5193002","MEDGEN:1682592"],"synonyms":[{"name":"DA2B4","type":"exact"}],"termid":"MONDO:0800200","xrefs":{"Monarch":{"xref_id":"0800200"}}}


id: MOD:01771
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The farnesyl cation protein modification reporter fragment produced by fragmentation of some farnesyl modified residues.","definition_xrefs":["PubMed:18688235","PubMed:15609361"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"farnesylated residue","termid":"MOD:00437"},{"relation_name":"is_a","term_name":"modification reporter fragment","termid":"MOD:01520"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"farnesyl reporter fragment","synonyms":[{"name":"(2E,6E)-3,7,11-trimethyldodeca-2,6,10-trien-1-ylium","type":"exact"},{"name":"Farn+","type":"exact"},{"name":"farnesyl cation","type":"exact"}],"termid":"MOD:01771"}


id: PBO:0113552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase complex alpha subunit, Ost1","termid":"PBO:0113552"}


id: PBO:0001369
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates pcl1","termid":"PBO:0001369"}


id: PBO:0005829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIID complex subunit Taf13 (predicted)","termid":"PBO:0005829"}


id: GO:2000197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ribonucleoprotein complex localization.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular localization","termid":"GO:0060341"},{"relation_name":"regulates","term_name":"ribonucleoprotein complex localization","termid":"GO:0071166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of ribonucleoprotein complex localization","synonyms":[{"name":"regulation of RNP localization","type":"exact"},{"name":"regulation of cellular ribonucleoprotein complex localization","type":"exact"},{"name":"regulation of establishment and maintenance of ribonucleoprotein complex localization","type":"exact"},{"name":"regulation of ribonucleoprotein complex localisation","type":"exact"}],"termid":"GO:2000197"}


id: PATO:0001605
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial pattern inhering in a bearer by virtue of the bearer's being in disarray; extremely disorderly.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"irregular spatial pattern","termid":"PATO:0000330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disheveled","termid":"PATO:0001605"}


id: GO:0062071
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transcription factor complex composed of a homeodomain protein and the M-specific peptide Mi that acts at the regulatory region of genes required for the activation of meiosis.","definition_xrefs":["PMID:30089908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Pi Mi complex","termid":"GO:0062071"}


id: MONDO:0021962
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"baetz-greenwalt syndrome","secondary_identifiers":["UMLS:C2931615","MESH:C537795","MEDGEN:444099"],"synonyms":[{"name":"hypoplastic right-sided heart complex","type":"related"}],"termid":"MONDO:0021962","xrefs":{"Monarch":{"xref_id":"0021962"}}}


id: PBO:0079497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin interacting protein","termid":"PBO:0079497"}


id: MONDO:0017449
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Split hand is a rare, non-syndromic limb reduction defect, clinically and genetically heterogeneous, characterized by bilateral or unilateral underdevelopment or absence of the central rays of the autopod, with absence of all or just some of the central phalanges and at least part of the associated metacarpal bones, yielding a cleft appearance of the hand. It is frequently associated with syndactyly and aplasia/hypoplasia of remaining digits and metacarpal bones. No other dysmorphic features are observed and development is appropriate for age.","definition_xrefs":["Orphanet:294992"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"split hand","secondary_identifiers":["UMLS:C2699510","HP:0001171","MEDGEN:397570","icd11.foundation:924222970"],"synonyms":[{"name":"ectrodactyly of hand","type":"exact"},{"name":"split hand","type":"exact"},{"name":"split hand (disease)","type":"exact"}],"termid":"MONDO:0017449","xrefs":{"Monarch":{"xref_id":"0017449"}}}


id: GO:1901201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of extracellular matrix assembly.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component biogenesis","termid":"GO:0044087"},{"relation_name":"is_a","term_name":"regulation of extracellular matrix organization","termid":"GO:1903053"},{"relation_name":"regulates","term_name":"extracellular matrix assembly","termid":"GO:0085029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of extracellular matrix assembly","termid":"GO:1901201"}


id: MONDO:0859748
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lymphomatoid granulomatosis that is characterized by the presence of occasional large lymphoid cells or immunoblasts in a polymorphous background. Necrosis is more commonly seen as compared to grade I lymphomatoid granulomatosis. By in situ hybridization, EBV-positive cells are readily seen.","definition_xrefs":["DOID:0081309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphomatoid granulomatosis","termid":"MONDO:0019466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"grade II lymphomatoid granulomatosis","secondary_identifiers":["MEDGEN:167833","UMLS:C0862090","NCIT:C7932"],"termid":"MONDO:0859748","xrefs":{"Monarch":{"xref_id":"0859748"}}}


id: MONDO:0012205
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant striatal degeneration is a neurologic disorder characterized by variable movement abnormalities due to dysfunction in the striatal part of the basal ganglia.","definition_xrefs":["OMIM:609161"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striatal degeneration, autosomal dominant","termid":"MONDO:0000211"},{"relation_name":"is_a","term_name":"parkinsonian disorder","termid":"MONDO:0021095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0021179"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0021179","MONDO:0005559"],"is_obsolete":false,"name":"autosomal dominant striatal neurodegeneration type 1","secondary_identifiers":["MEDGEN:934775","SCTID:725392005","UMLS:C4310808"],"synonyms":[{"name":"ADSD","type":"related"},{"name":"ADSD1","type":"exact"},{"name":"PDE8B striatal degeneration, autosomal dominant","type":"exact"},{"name":"autosomal dominant striatal neurodegeneration","type":"related"},{"name":"striatal Degeneration, autosomal dominant 1","type":"exact"},{"name":"striatal degeneration, autosomal dominant","type":"related"},{"name":"striatal degeneration, autosomal dominant 1","type":"exact"},{"name":"striatal degeneration, autosomal dominant caused by mutation in PDE8B","type":"exact"}],"termid":"MONDO:0012205","xrefs":{"Monarch":{"xref_id":"0012205"}}}


id: GO:0071180
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of the intracellular domain of Notch2 (ICN2), the DNA-binding transcription factor RBP-Jkappa, and the transcriptional coactivator Mastermind-like-3 (MAML3); the complex is involved in transcriptional activation in response to Notch-mediated signaling.","definition_xrefs":["PMID:12370315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"MAML3-RBP-Jkappa-ICN2 complex","synonyms":[{"name":"MAML3-RBP-Jkappa-Notch2 complex","type":"exact"}],"termid":"GO:0071180"}


id: GO:0140817
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of ADP-ribose groups to the serine-10 or an equivalent residue of the N-terminal tail of histone H3.","definition_xrefs":["PMID:34874266"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD+-protein-serine ADP-ribosyltransferase activity","termid":"GO:0140805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0003824","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"NAD+-histone H3S10 serine ADP-ribosyltransferase activity","synonyms":[{"name":"NAD+-histone H3-S10 serine ADP-ribosyltransferase activity","type":"exact"},{"name":"NAD+-histone-serine ADP-ribosyltransferase activity (H3-S10 specific)","type":"exact"}],"termid":"GO:0140817"}


id: PBO:0088835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear cap-binding complex small subunit","termid":"PBO:0088835"}


id: PBO:0031062
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_with_elongated,_septated_germ_tube","termid":"PBO:0031062"}


id: PBO:0012846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome subunit Rrp46","termid":"PBO:0012846"}


id: MONDO:0018274
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"GM3 synthase deficiency is characterized by recurrent seizures (epilepsy) and problems with brain development. Within the first few weeks after birth, affected infants become irritable and develop feeding difficulties and vomiting that prevent them from growing and gaining weight at the usual rate. Seizures begin within the first year of life and worsen over time. Multiple types of seizures are possible, including generalized tonic-clonic seizures (also known as grand mal seizures), which cause muscle rigidity, convulsions, and loss of consciousness. Some affected children also experience prolonged episodes of seizure activity called nonconvulsive status epilepticus. The seizures associated with GM3 synthase deficiency tend to be resistant (refractory) to treatment with antiseizure medications.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"excluded_subClassOf","term_name":"skin pigmentation disorder","termid":"MONDO:0019288"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"inborn disorder of glycosphingolipid and glycosylphosphatidylinositol anchor glycosylation","termid":"MONDO:0017748"},{"relation_name":"is_a","term_name":"disorder of phospholipids, sphingolipids and fatty acids biosynthesis","termid":"MONDO:0018117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005066","MONDO:0002525","MONDO:0024322"],"is_obsolete":false,"name":"GM3 synthase deficiency","secondary_identifiers":["DOID:0060470","GARD:12059","MEDGEN:323005","Orphanet:370933","Orphanet:370938","UMLS:C1836824","SCTID:722762005","OMIM:609056","Orphanet:171714"],"synonyms":[{"name":"Amish infantile epilepsy syndrome","type":"exact"},{"name":"GM3 synthase deficiency","type":"exact"},{"name":"SPDRS","type":"exact"},{"name":"ST3GAL5-CDG","type":"exact"},{"name":"disorder of lactosylceramide alpha-2,3-sialyltransferase activity","type":"exact"},{"name":"epilepsy syndrome, infantile-onset symptomatic","type":"exact"},{"name":"infantile-onset symptomatic epilepsy syndrome - developmental stagnation - blindness","type":"exact"},{"name":"infantile-onset symptomatic epilepsy syndrome-developmental stagnation-blindness syndrome","type":"exact"},{"name":"lactosylceramide alpha-2,3-sialyltransferase activity disease","type":"exact"},{"name":"salt & pepper syndrome","type":"exact"},{"name":"salt and pepper developmental regression syndrome","type":"exact"},{"name":"salt and pepper mental retardation syndrome","type":"related"},{"name":"salt-and-pepper syndrome","type":"exact"}],"termid":"MONDO:0018274","xrefs":{"Monarch":{"xref_id":"0018274"}}}


id: MONDO:0010430
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any non-syndromic X-linked intellectual disability in which the cause of the disease is a mutation in the ZNF711 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic X-linked intellectual disability","termid":"MONDO:0019181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked 97","secondary_identifiers":["GARD:22686","MESH:C567583","UMLS:C2749020","OMIM:300803","DOID:0112046","MEDGEN:440689"],"synonyms":[{"name":"MRX97","type":"related"},{"name":"Mrxz","type":"related"},{"name":"ZNF711 non-syndromic X-linked intellectual disability","type":"exact"},{"name":"intellectual developmental disorder, X-linked 97","type":"exact"},{"name":"intellectual disability, X-linked 65","type":"related"},{"name":"intellectual disability, X-linked 97","type":"exact"},{"name":"intellectual disability, X-linked type 97","type":"exact"},{"name":"mental retardation, X-linked 65","type":"related"},{"name":"mental retardation, X-linked 97","type":"related"},{"name":"mental retardation, X-linked type 97","type":"exact"},{"name":"non-syndromic X-linked intellectual disability caused by mutation in ZNF711","type":"exact"}],"termid":"MONDO:0010430","xrefs":{"Monarch":{"xref_id":"0010430"}}}


id: FYPO:0000904
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which microtubule polymerization or depolymerization, by the addition or removal of tubulin dimers respectively, occurs to a lesser extent than normal. Microtubules are thus less dynamic than normal.","definition_xrefs":["PomBase:mah","GO:0031109"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0001350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000054","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased microtubule polymerization or depolymerization","synonyms":[{"name":"decreased microtubule dynamicity","type":"related"},{"name":"decreased microtubule growth or shrinkage","type":"related"},{"name":"decreased microtubule polymerisation or depolymerisation","type":"exact"},{"name":"decreased microtubule polymerization or depolymerization during mitotic cell cycle","type":"related"},{"name":"decreased microtubule polymerization or depolymerization during vegetative growth","type":"exact"},{"name":"reduced microtubule polymerization or depolymerization","type":"exact"}],"termid":"FYPO:0000904"}


id: GO:0052223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a lower concentration of a specific chemical on, within or near a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative chemotaxis in environment of other organism involved in symbiotic interaction (obsolete GO:0052223)","synonyms":[{"name":"negative chemotaxis in environment of other organism during symbiotic interaction","type":"related"},{"name":"negative chemotaxis in response to environment of other organism","type":"exact"}],"termid":"GO:0052223"}


id: PBO:0004236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Mts4","termid":"PBO:0004236"}


id: MONDO:0002009
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An episode of depression lasting two or more weeks without an intervening episode of mania.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"depressive disorder","termid":"MONDO:0002050"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major depressive disorder","secondary_identifiers":["MESH:D003865","SCTID:300706003","MFOMD:0000143","UMLS:C1269683","NCIT:C35094","EFO:0003761","ICD9:296.3","OMIM:608516","SCTID:370143000","DOID:1470","ICD9:296.2","ICD9:296.30","MEDGEN:266123","ICD9:296.20"],"synonyms":[{"name":"major depression","type":"exact"},{"name":"major depressive disorder","type":"exact"},{"name":"major depressive disorder 1","type":"broad"},{"name":"major depressive disorder 2","type":"broad"},{"name":"major depressive disorder and accelerated response to antidepressant drug treatment","type":"exact"},{"name":"major depressive disorder, response to citalopram therapy in","type":"exact"},{"name":"recurrent major depression","type":"exact"},{"name":"single major depressive episode","type":"exact"},{"name":"unipolar depression","type":"exact"},{"name":"unipolar depression, susceptibility to","type":"exact"}],"termid":"MONDO:0002009","xrefs":{"Monarch":{"xref_id":"0002009"}}}


id: MONDO:1010750
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Epidermolysis bullosa that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa, non-human animal","termid":"MONDO:1010129"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epidermolysis bullosa, dog","secondary_identifiers":["OMIA:000340-9615"],"termid":"MONDO:1010750","xrefs":{"Monarch":{"xref_id":"1010750"}}}


id: GO:0022005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process occurring before the brain has been specified along the neural axis that is required for the midbrain-hindbrain boundary to attain its fully functional state. The midbrain-hindbrain domain of the embryonic brain is comprised of the mesencephalic vesicle and the first rhombencephalic vesicle at early somitogenesis stages. An organizing center at the boundary patterns the midbrain and hindbrain primordia of the neural plate.","definition_xrefs":["GOC:cls","GOC:dgh","GOC:jid","PMID:15541513","GOC:dph","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"part_of","term_name":"midbrain-hindbrain boundary maturation","termid":"GO:0021732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"midbrain-hindbrain boundary maturation during neural plate development","synonyms":[{"name":"midbrain-hindbrain boundary maturation involved in neural plate development","type":"related"}],"termid":"GO:0022005"}


id: PBO:0072719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoid X receptor beta","termid":"PBO:0072719"}


id: PBO:0026638
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_duration_of_mitotic_interphase","termid":"PBO:0026638"}


id: GO:1900003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of serine-type endopeptidase activity.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endopeptidase activity","termid":"GO:0052548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of serine-type endopeptidase activity","synonyms":[{"name":"regulation of blood coagulation factor activity","type":"related"}],"termid":"GO:1900003"}


id: PBO:0027962
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_glutathione_level_during_nitrogen_starvation","termid":"PBO:0027962"}


id: PBO:0055170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2594","termid":"PBO:0055170"}


id: GO:0080179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 1-methylguanosine.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanosine-containing compound metabolic process","termid":"GO:1901068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"1-methylguanosine metabolic process","termid":"GO:0080179"}


id: PBO:0068624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 4, pseudogene","termid":"PBO:0068624"}


id: PBO:0091906
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human AGO2","termid":"PBO:0091906"}


id: MONDO:0017503
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acheiria","termid":"MONDO:0017445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"acheiria, bilateral","secondary_identifiers":["Orphanet:295103","SCTID:371189003","UMLS:C0685394","icd11.foundation:1430605018","MEDGEN:672347"],"synonyms":[{"name":"congenital absence of hand, bilateral","type":"exact"}],"termid":"MONDO:0017503","xrefs":{"Monarch":{"xref_id":"0017503"}}}


id: PBO:0073511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH2 domain containing 4B","termid":"PBO:0073511"}


id: SO:0000729
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute of protein-coding genes where the initial protein product contains an intein.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein_coding","termid":"SO:0000010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intein_containing","synonyms":[{"name":"intein containing","type":"exact"}],"termid":"SO:0000729"}


id: GO:0102420
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: hexadecanedioyl-CoA + sn-glycerol 3-phosphate = coenzyme A + 1-C16:0-alpha,omega-dicarboxyl-2-lysophosphatidate.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete sn-1-glycerol-3-phosphate C16:0-DCA-CoA acyl transferase activity (obsolete GO:0102420)","termid":"GO:0102420"}


id: PBO:0043498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contactin 5","termid":"PBO:0043498"}


id: PBO:0080002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 11","termid":"PBO:0080002"}


id: PBO:0090170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, CBF1/Su(H)/LAG-1 family Cbf12","termid":"PBO:0090170"}


id: FYPO:0004322
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin containing the histone H3 variant CenH3 (also called CENP-A; Cnp1 in S. pombe) are assembled over a smaller portion of the centromeric region of the chromosome than normal. CENP-A-containing nucleosomes are normally assembled into chromatin at the centromeres, encompassing the central core and centromeric inner repeat regions.","definition_xrefs":["PomBase:vw","GO:0034080","PomBase:mah","PMID:18493607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal CENP-A containing chromatin assembly","termid":"FYPO:0003409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000641"],"is_obsolete":false,"name":"decreased spatial extent of CENP-A containing chromatin assembly","synonyms":[{"name":"decreased extent of CENP-A containing nucleosome","type":"related"},{"name":"decreased spatial extent of CENP-A containing nucleosome assembly","type":"related"},{"name":"decreased spatial extent of CENP-A containing nucleosome assembly at centromere","type":"exact"},{"name":"decreased spatial extent of CENP-A containing nucleosome assembly during mitotic cell cycle","type":"related"},{"name":"decreased spatial extent of CENP-A containing nucleosome assembly during vegetative growth","type":"exact"},{"name":"decreased spatial extent of CENP-A deposition","type":"related"},{"name":"decreased spatial extent of CENP-A loading","type":"related"},{"name":"decreased spatial extent of CenH3-containing nucleosome assembly at centromere","type":"related"},{"name":"decreased spatial extent of DNA replication-independent nucleosome assembly at centromere","type":"exact"},{"name":"decreased spatial extent of centromere-specific histone exchange","type":"exact"},{"name":"decreased spatial extent of centromere-specific nucleosome assembly","type":"exact"},{"name":"decreased spatial extent of centromeric DNA replication-independent nucleosome assembly","type":"exact"},{"name":"reduced spatial extent of CENP-A containing nucleosome assembly","type":"exact"}],"termid":"FYPO:0004322"}


id: GO:0098951
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the postsynaptic recycling endosome membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of postsynaptic recycling endosome membrane (obsolete GO:0098951)","synonyms":[{"name":"intrinsic to postsynaptic recycling endosome membrane","type":"exact"}],"termid":"GO:0098951"}


id: MONDO:0006081
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A melanoma arising from the anus. Clinical presentation includes rectal bleeding, tenesmus, pain, and change in bowel habit. The prognosis is usually poor.","definition_xrefs":["NCIT:C4639"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"intestinal neoplasm","termid":"MONDO:0021118"},{"relation_name":"is_a","term_name":"anus cancer","termid":"MONDO:0001879"},{"relation_name":"is_a","term_name":"rectum malignant melanoma","termid":"MONDO:0002167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"anal melanoma","secondary_identifiers":["ONCOTREE:ARMM","MEDGEN:91151","SCTID:276821000","DOID:14145","EFO:1000080","UMLS:C0349538"],"synonyms":[{"name":"anal malignant melanoma","type":"exact"},{"name":"anal melanoma","type":"exact"},{"name":"anus melanoma","type":"exact"},{"name":"anus melanoma (disease)","type":"exact"},{"name":"malignant anus melanoma","type":"exact"},{"name":"malignant melanoma of anus","type":"exact"},{"name":"malignant melanoma of the anus","type":"exact"},{"name":"melanoma (disease) of anus","type":"exact"},{"name":"melanoma of anus","type":"exact"},{"name":"melanoma of the anus","type":"exact"}],"termid":"MONDO:0006081","xrefs":{"Monarch":{"xref_id":"0006081"}}}


id: GO:0031531
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a receptor for thyrotropin-releasing hormone, a tripeptide hormone that is produced by the hypothalamus and stimulates the release of thyroid-stimulating hormone (TSH) and prolactin by the anterior pituitary.","definition_xrefs":["PMID:8592728"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"},{"relation_name":"is_a","term_name":"peptide hormone receptor binding","termid":"GO:0051428"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"thyrotropin-releasing hormone receptor binding","secondary_identifiers":["GO:0031888"],"synonyms":[{"name":"thyrotropin releasing hormone receptor binding","type":"exact"},{"name":"thyrotropin-releasing hormone receptor ligand","type":"narrow"}],"termid":"GO:0031531"}


id: PBO:0061668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 50 pseudogene 1","termid":"PBO:0061668"}


id: PBO:0042213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin L1","termid":"PBO:0042213"}


id: GO:0097466
data:
  {"annotated_genes":["SJAG_01858","SJAG_03032"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95356,97523],"is_not":false,"summary":null,"term":"GO:0097466"}]},"cv_name":"biological_process","definition":"An ERAD pathway whereby endoplasmic reticulum (ER)-resident glycoproteins are targeted for degradation. Includes differential processing of the glycoprotein sugar chains, retrotranslocation to the cytosol and degradation by the ubiquitin-proteasome pathway. A glycoprotein is a compound in which a carbohydrate component is covalently bound to a protein component.","definition_xrefs":["GOC:bf","GOC:al","PMID:16079177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoprotein catabolic process","termid":"GO:0006516"},{"relation_name":"is_a","term_name":"ERAD pathway","termid":"GO:0036503"},{"relation_name":"is_a","term_name":"response to glycoprotein","termid":"GO:1904587"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01858":null,"SJAG_03032":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"ubiquitin-dependent glycoprotein ERAD pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ER-associated glycoprotein degradation","type":"exact"},{"name":"glycoprotein ERAD","type":"exact"},{"name":"gpERAD","type":"exact"},{"name":"misfolded or incompletely synthesized glycoprotein catabolic process","type":"broad"}],"termid":"GO:0097466","terms_by_termid":{"GO:0097466":null}}


id: GO:0015768
data:
  {"annotated_genes":["SJAG_03960"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97582],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106081"}]},"cv_name":"biological_process","definition":"The directed movement of maltose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Maltose is the disaccharide 4-O-alpha-D-glucopyranosyl-D-glucopyranose, an intermediate in the catabolism of glycogen and starch.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide transport","termid":"GO:0015766"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"maltose transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015768","terms_by_termid":{"GO:0106081":null}}


id: PBO:0091104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-B","termid":"PBO:0091104"}


id: MONDO:0005784
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder caused by hantaviruses of the family Bunyaviridae. It is transmitted by rodents and is manifested with fever, hemorrhage, and renal failure. Other symptoms include headaches, abdominal and back pain, and blurred vision.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"},{"relation_name":"is_a","term_name":"hantavirus infectious disease","termid":"MONDO:0005780"},{"relation_name":"is_a","term_name":"urinary tract infection","termid":"MONDO:0100338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"hantavirus hemorrhagic fever with renal syndrome","secondary_identifiers":["ICD10CM:A98.5","SCTID:102455002","NCIT:C84753","DOID:11266","ICD9:078.6"],"synonyms":[{"name":"HFRS","type":"exact"},{"name":"Puumala virus nephropathy","type":"narrow"},{"name":"hemorrhagic fever with renal syndrome","type":"related"},{"name":"hemorrhagic fever, Russian","type":"narrow"},{"name":"hemorrhagic nephrosonephritis","type":"exact"}],"termid":"MONDO:0005784","xrefs":{"Monarch":{"xref_id":"0005784"}}}


id: GO:0031613
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The subunits that form the peripheral lid of the regulatory particle of a proteasome located in the nucleus of a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome regulatory particle, lid subcomplex","termid":"GO:0008541"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear proteasome regulatory particle","termid":"GO:0031598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"nuclear proteasome regulatory particle, lid subcomplex","termid":"GO:0031613"}


id: FYPO:0004711
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more translation RNAs measured in a cell is lower than normal (i.e. lower than observed in wild-type cells). Translation RNAs are transcribed from genes whose products are involved in translation.","definition_xrefs":["PMID:18203864","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"},{"relation_name":"is_a","term_name":"altered level of translation gene mRNA during vegetative growth","termid":"FYPO:0005858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"decreased level of translation gene mRNA during vegetative growth","synonyms":[{"name":"decreased level of translation gene RNA during vegetative growth","type":"exact"},{"name":"decreased level of translation gene mRNA during mitotic cell cycle","type":"related"},{"name":"decreased level of translation gene transcripts during vegetative growth","type":"exact"},{"name":"decreased translation gene mRNA accumulation during vegetative growth","type":"related"},{"name":"reduced level of translation gene mRNA during vegetative growth","type":"exact"}],"termid":"FYPO:0004711"}


id: GO:0060988
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of macromolecules to form a macromolecular complex that contains a tube of lipid surrounded by a protein coat involved in membrane shaping of vesicle membranes as they fuse or undergo fission.","definition_xrefs":["GOC:ascb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-lipid complex assembly","termid":"GO:0065005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"lipid tube assembly","synonyms":[{"name":"lipid tubulation","type":"exact"}],"termid":"GO:0060988"}


id: PBO:0001837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human FAM32A homolog","termid":"PBO:0001837"}


id: GO:0061808
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of genetic recombination at the centromere.","definition_xrefs":["GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA recombination","termid":"GO:0045910"},{"relation_name":"is_a","term_name":"regulation of DNA recombination at centromere","termid":"GO:0061806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"negatively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006310","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"negative regulation of DNA recombination at centromere","synonyms":[{"name":"negative regulation of centromeric recombination","type":"exact"}],"termid":"GO:0061808"}


id: MONDO:0018099
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Whipple disease (obsolete MONDO:0018099)","termid":"MONDO:0018099","xrefs":{"Monarch":{"xref_id":"0018099"}}}


id: GO:1990258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of a histone by addition of a methyl group to an glutamine residue.","definition_xrefs":["PMID:24352239"],"gene_count":0,"genotype_count":0,"name":"obsolete histone glutamine methylation (obsolete GO:1990258)","termid":"GO:1990258"}


id: GO:0072156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a distal tubule are generated and organized. The distal tubule is a nephron tubule that begins at the macula densa and extends to the connecting tubule.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule morphogenesis","termid":"GO:0072078"},{"relation_name":"part_of","term_name":"distal tubule development","termid":"GO:0072017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"distal tubule morphogenesis","termid":"GO:0072156"}


id: PBO:0084179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone acetyltransferase (HAT) catalytic subunit of the SAS complex; acetylates free histones and nucleosomes and regulates transcriptional silencing; member of the MYSTacetyltransferase family; other members are Sas4p and Sas5p","termid":"PBO:0084179"}


id: FYPO:0003678
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of doxorubicin measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular doxorubicin level","synonyms":[{"name":"increased cellular doxorubicin level during mitotic cell cycle","type":"related"},{"name":"increased cellular doxorubicin level during vegetative growth","type":"exact"},{"name":"increased doxorubicin accumulation","type":"related"}],"termid":"FYPO:0003678"}


id: MONDO:0021202
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A otitis media (disease) with a basis in a pathological type I hypersensitivity reaction.","definition_xrefs":["MONDO:patterns/allergic_form_of_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"allergic disease","termid":"MONDO:0005271"},{"relation_name":"is_a","term_name":"otitis media","termid":"MONDO:0005441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"allergic otitis media","secondary_identifiers":["UMLS:C0271447","SCTID:26169004","MEDGEN:543352"],"synonyms":[{"name":"allergic form of otitis media (disease)","type":"exact"},{"name":"allergic otitis media (disease)","type":"exact"}],"termid":"MONDO:0021202","xrefs":{"Monarch":{"xref_id":"0021202"}}}


id: GO:0002501
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The binding of a peptide to the antigen binding groove of an MHC protein complex.","definition_xrefs":["GOC:add","PMID:15771591","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"MHC protein complex assembly","termid":"GO:0002396"},{"relation_name":"part_of","term_name":"antigen processing and presentation of peptide antigen","termid":"GO:0048002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"peptide antigen assembly with MHC protein complex","termid":"GO:0002501"}


id: GO:0015804
data:
  {"annotated_genes":["SJAG_03400","SJAG_04295","SJAG_03256","SJAG_02029","SJAG_04725","SJAG_05346","SJAG_00626","SJAG_04588","SJAG_03970","SJAG_04984","SJAG_00991","SJAG_03591"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[64660],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903712"},{"annotations":[64363],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006868"},{"annotations":[100038,71811],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904983"},{"annotations":[111874,104624],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903714"},{"annotations":[105655],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090516"},{"annotations":[66790],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015825"},{"annotations":[89904],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905533"},{"annotations":[95143,93561,100695],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905534"},{"annotations":[92429],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140300"}]},"cv_name":"biological_process","definition":"The directed movement of neutral amino acids, amino acids with no net charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transport","termid":"GO:0006865"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00626":null,"SJAG_00991":null,"SJAG_02029":null,"SJAG_03256":null,"SJAG_03400":null,"SJAG_03591":null,"SJAG_03970":null,"SJAG_04295":null,"SJAG_04588":null,"SJAG_04725":null,"SJAG_04984":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"neutral amino acid transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0015804","terms_by_termid":{"GO:0006868":null,"GO:0015825":null,"GO:0090516":null,"GO:0140300":null,"GO:1903712":null,"GO:1903714":null,"GO:1904983":null,"GO:1905533":null,"GO:1905534":null}}


id: PBO:0076367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trace amine associated receptor 4, pseudogene","termid":"PBO:0076367"}


id: GO:0006719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of juvenile hormones, the three sesquiterpenoid derivatives that function to maintain the larval state of insects at molting and that may be required for other processes, e.g. oogenesis.","definition_xrefs":["GOC:go_curators","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"juvenile hormone metabolic process","termid":"GO:0006716"},{"relation_name":"is_a","term_name":"sesquiterpenoid catabolic process","termid":"GO:0016107"},{"relation_name":"is_a","term_name":"hormone catabolic process","termid":"GO:0042447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"juvenile hormone catabolic process","synonyms":[{"name":"juvenile hormone breakdown","type":"exact"},{"name":"juvenile hormone catabolism","type":"exact"},{"name":"juvenile hormone degradation","type":"exact"}],"termid":"GO:0006719"}


id: GO:0033040
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with soluble sour compounds to initiate a change in cell activity. These receptors are responsible for the sense of sour taste.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"taste receptor activity","termid":"GO:0008527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"sour taste receptor activity","termid":"GO:0033040"}


id: MONDO:0010316
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"FG syndrome","termid":"MONDO:0002010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FG syndrome 3","secondary_identifiers":["UMLS:C1845567","MEDGEN:375687","OMIM:300406"],"synonyms":[{"name":"FG syndrome 3","type":"exact"},{"name":"FGS3","type":"related"}],"termid":"MONDO:0010316","xrefs":{"Monarch":{"xref_id":"0010316"}}}


id: PBO:0042676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEA cell adhesion molecule pseudogene 10","termid":"PBO:0042676"}


id: FYPO:0003054
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome pairing during meiosis (synapsis) is decreased (i.e. occurs to a lower extent) at a cis-acting homologous chromosome pairing region such as the omt3 locus on chromosome 1 or the sme2 locus on chromosome 2.","definition_xrefs":["PMID:24173580","PMID:22582262","PomBase:mah","PMID:23117617"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased homologous chromosome pairing","termid":"FYPO:0003025"},{"relation_name":"is_a","term_name":"abnormal homologous chromosome pairing at cis-acting homologous chromosome pairing region","termid":"FYPO:0003052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000631","FYPO:0000641"],"is_obsolete":false,"name":"decreased homologous chromosome pairing at cis-acting homologous chromosome pairing region","synonyms":[{"name":"decreased homologous chromosome pairing at meiosis at cis-acting homologous chromosome pairing region","type":"exact"},{"name":"decreased synapsis at cis-acting homologous chromosome pairing region","type":"exact"},{"name":"reduced homologous chromosome pairing at cis-acting homologous chromosome pairing region","type":"exact"}],"termid":"FYPO:0003054"}


id: PBO:0066594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras homolog family member H","termid":"PBO:0066594"}


id: PBO:0043363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clathrin light chain A","termid":"PBO:0043363"}


id: FYPO:0002962
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the Mei2 nuclear dot is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to Mei2 nuclear dot","termid":"FYPO:0002958"},{"relation_name":"is_a","term_name":"abolished protein localization to nucleus","termid":"FYPO:0003450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to Mei2 nuclear dot","synonyms":[{"name":"abolished protein localization to meiRNA nuclear dot","type":"related"},{"name":"protein localisation to Mei2 nuclear dot abolished","type":"exact"},{"name":"protein localization to Mei2 nuclear dot abolished","type":"exact"}],"termid":"FYPO:0002962"}


id: GO:0016407
data:
  {"annotated_genes":["SJAG_02990","SJAG_04305","SJAG_02654","SJAG_03537","SJAG_04107","SJAG_04535","SJAG_03305","SJAG_00413","SJAG_02165","SJAG_02309","SJAG_01877","SJAG_01619","SJAG_02726","SJAG_04131","SJAG_04791","SJAG_05413","SJAG_01826","SJAG_01204","SJAG_00519","SJAG_01592","SJAG_04631","SJAG_04756","SJAG_00676","SJAG_03112","SJAG_02773","SJAG_03288","SJAG_00695","SJAG_02158","SJAG_00246","SJAG_00395","SJAG_02296","SJAG_03900","SJAG_01899"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58655],"is_not":false,"summary":null,"term":"GO:0016407"},{"annotations":[74125],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990883"},{"annotations":[60356],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004313"},{"annotations":[74896],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003985"},{"annotations":[76120],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004059"},{"annotations":[94578],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046941"},{"annotations":[102445,89217],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004145"},{"annotations":[63490],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004742"},{"annotations":[72651],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004343"},{"annotations":[72289,71825],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016287"},{"annotations":[66561],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004402"},{"annotations":[75770],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043998"},{"annotations":[92570,93227],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036408"},{"annotations":[93228],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043993"},{"annotations":[100782],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044016"},{"annotations":[74321],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032931"},{"annotations":[93229],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043992"},{"annotations":[100783,75772],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010485"},{"annotations":[90244],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043997"},{"annotations":[90245],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043995"},{"annotations":[90246],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043996"},{"annotations":[78084],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004414"},{"annotations":[90049],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047198"},{"annotations":[66640,74114],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004042"},{"annotations":[66639],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004358"},{"annotations":[104849,72181,119122,64501],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008080"},{"annotations":[105403,117208],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120518"},{"annotations":[75773,79102],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990189"},{"annotations":[105814],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061733"},{"annotations":[119857],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004596"},{"annotations":[91212],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008999"},{"annotations":[79103],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990190"},{"annotations":[77891],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009001"},{"annotations":[74126],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051392"},{"annotations":[97285],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106261"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of an acetyl group to an acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl 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