# terms

id: MONDO:0100387
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly Monosomy 7. (A chromosomal abnormality consisting of the absence of one of the copies of chromosome 7 in somatic cells.)","definition_xrefs":["NCIT:C36411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046","MONDO:0004992"],"is_obsolete":false,"name":"acute myeloid leukemia, Monosomy 7","synonyms":[{"name":"AML, Monosomy 7","type":"exact"}],"termid":"MONDO:0100387","xrefs":{"Monarch":{"xref_id":"0100387"}}}


id: PBO:0087682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the mRNA cleavage and polyadenlylation factor (CPF); required for pre-mRNA cleavage, polyadenylation and poly(A) site recognition, 43% similarity with the mammalian CPSF-100 protein.","termid":"PBO:0087682"}


id: PBO:0088270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L51-b","termid":"PBO:0088270"}


id: GO:0102467
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: scutellarein + UDP-alpha-D-glucuronate = scutellarin + UDP.","definition_xrefs":["RHEA:28318"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"scutellarein 7-O-glucuronosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-14058"],"termid":"GO:0102467"}


id: PBO:0075138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNRPA1 divergent transcript","termid":"PBO:0075138"}


id: MONDO:0024454
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease that involves the sacral nerve plexus.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lumbosacral plexus lesion","termid":"MONDO:0001829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"sacral nerve plexus disorder","secondary_identifiers":["MEDGEN:419804","MESH:C537224","UMLS:C2931445"],"synonyms":[{"name":"disease of sacral nerve plexus","type":"exact"},{"name":"disease or disorder of sacral nerve plexus","type":"exact"},{"name":"disorder of sacral nerve plexus","type":"exact"},{"name":"sacral nerve plexus disease or disorder","type":"exact"},{"name":"sacral nerve plexus disorder","type":"exact"},{"name":"sacral plexopathy","type":"exact"}],"termid":"MONDO:0024454","xrefs":{"Monarch":{"xref_id":"0024454"}}}


id: PBO:0059535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded tRNA-Phe (UUU/C)","termid":"PBO:0059535"}


id: PBO:0072322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 8","termid":"PBO:0072322"}


id: MONDO:0007712
data:
  {"annotated_genes":["SJAG_00539","SJAG_00322"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87509,87508],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958175"}]},"cv_name":"mondo","definition":"Oculoauriculovertebral spectrum (OAVS) with radial defects is a rare branchial arches and limb primordia development disorder characterized by variable degrees of uni- or bilateral craniofacial malformation and radial defects that result in extremely variable phenotypic manifestations. Characteristic features include low postnatal weight, short stature, vertebral defects, hearing loss, and facial dysmorphism (incl. facial asymmetry, external, middle, and inner ear malformations, orofacial clefts, and mandibular hypoplasia). These features are invariably associated with radial defects, such as preaxial polydactyly, thumb and/or radius hypoplasia/agenesis, or triphalangeal thumb. Cardiac, pulmonary, renal, and central nervous system involvement has also been reported.","definition_xrefs":["Orphanet:2549"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00322":null,"SJAG_00539":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"oculoauriculovertebral spectrum with radial defects","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:726722009","UMLS:C0220681","GARD:3653","MEDGEN:67392","OMIM:141400"],"synonyms":[{"name":"Goldenhar syndrome with ipsilateral radial defect","type":"related"},{"name":"Moeschler Clarren syndrome","type":"related"},{"name":"Moeschler-Clarren syndrome","type":"exact"},{"name":"Oavs with radial defect","type":"related"},{"name":"hemifacial microsomia with radial defects","type":"related"},{"name":"hemifacial microsomia-radial defects syndrome","type":"exact"},{"name":"microsomia hemifacial radial defects","type":"related"},{"name":"oculoauriculovertebral spectrum with radial defect","type":"related"}],"termid":"MONDO:0007712","terms_by_termid":{"MONDO:0958175":null},"xrefs":{"Monarch":{"xref_id":"0007712"}}}


id: GO:0060538
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of a skeletal muscle organ over time from its initial formation to its mature state. A skeletal muscle organ includes the skeletal muscle tissue and its associated connective tissue.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle organ development","termid":"GO:0007517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal muscle organ development","termid":"GO:0060538"}


id: PBO:0062661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 13 subfamily D member 2 pseudogene","termid":"PBO:0062661"}


id: GO:0005813
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle.","definition_xrefs":["GOC:mah","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule organizing center","termid":"GO:0005815"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0015630"],"is_obsolete":false,"name":"centrosome","secondary_identifiers":["Wikipedia:Centrosome"],"termid":"GO:0005813"}


id: PBO:0027592
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_tyrosine_phosphorylation_during_vegetative_growth","termid":"PBO:0027592"}


id: MONDO:0011208
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Malignant atrophic papulosis (MAP) is a rare, chronic, thrombo-obliterative vasculopathy characterized by papular skin lesions with central porcelain-white atrophy and a surrounding teleangiectatic rim. Systemic lesions may affect the gastrointestinal tract and the central nervous system (CNS) and are potentially lethal.","definition_xrefs":["Orphanet:679"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin vascular disease","termid":"MONDO:0019293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"malignant atrophic papulosis","secondary_identifiers":["ICD9:447.8","MEDGEN:113138","MESH:D054853","OMIM:602248","NCIT:C84835","UMLS:C0221011","SCTID:400171002","icd11.foundation:792094526","NORD:1036","MedDRA:10064281","GARD:6249"],"synonyms":[{"name":"Degos Disease","type":"exact"},{"name":"Degos disease","type":"exact"},{"name":"Degos syndrome","type":"related"},{"name":"Degos's malignant atrophic papulosis","type":"related"},{"name":"Kohlmeier-Degos disease","type":"exact"},{"name":"Kohlmeier-Degos-Delort-Tricort syndrome","type":"exact"},{"name":"Köhlmeier-Degos disease","type":"exact"},{"name":"Köhlmeier-Degos-Delort-Tricort syndrome","type":"exact"},{"name":"atrophic papulosis, malignant","type":"related"},{"name":"malignant atrophic papulosis","type":"exact"},{"name":"papulosis atrophican maligna","type":"exact"},{"name":"papulosis, malignant atrophic","type":"related"}],"termid":"MONDO:0011208","xrefs":{"Monarch":{"xref_id":"0011208"}}}


id: GO:0034385
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A plasma lipoprotein particle that has a hydrophobic core enriched in triglycerides surrounded by an amphipathic monolayer of phospholipids, cholesterol and apolipoproteins. Triglyceride-rich lipoprotein particles transport lipids, which are non-covalently associated with the particles, in the blood.","definition_xrefs":["GOC:BHF","GOC:rl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma lipoprotein particle","termid":"GO:0034358"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005576","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"triglyceride-rich plasma lipoprotein particle","synonyms":[{"name":"triacylglycerol-rich lipoprotein particle","type":"narrow"},{"name":"triglyceride-rich lipoprotein particle","type":"broad"}],"termid":"GO:0034385"}


id: GO:0004797
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + thymidine = ADP + thymidine 5'-phosphate.","definition_xrefs":["EC:2.7.1.21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxynucleoside kinase activity","termid":"GO:0019136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016301"],"is_obsolete":false,"name":"thymidine kinase activity","secondary_identifiers":["RHEA:19129","MetaCyc:THYKI-RXN"],"synonyms":[{"name":"2'-deoxythymidine kinase activity","type":"related"},{"name":"ATP:thymidine 5'-phosphotransferase activity","type":"related"},{"name":"deoxythymidine kinase (phosphorylating)","type":"related"},{"name":"thymidine kinase (phosphorylating)","type":"related"}],"termid":"GO:0004797"}


id: PBO:0090391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome export adaptor Nmd3","termid":"PBO:0090391"}


id: GO:0010274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Growth or movement in a sessile organism toward or away from water, as of the roots of a plant.","definition_xrefs":["ISBN:0395825172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tropism","termid":"GO:0009606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hydrotropism","secondary_identifiers":["Wikipedia:Hydrotropism"],"termid":"GO:0010274"}


id: GO:0042765
data:
  {"annotated_genes":["SJAG_03672","SJAG_03292","SJAG_02776","SJAG_00846","SJAG_05278"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72312,72552,76288,76290,77092],"is_not":false,"summary":null,"term":"GO:0042765"}]},"cv_name":"cellular_component","definition":"An enzyme complex which in humans and yeast consists of at least five proteins; for example, the complex contains GAA1, GPI8, PIG-S, PIG-U, and PIG-T in human, and Gaa1p, Gab1p, Gpi8p, Gpi16p, and Gpi17p in yeast. Catalyzes the posttranslational attachment of the carboxy-terminus of a precursor protein to a GPI-anchor.","definition_xrefs":["GOC:rb","GOC:jl","PMID:12802054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"caspase complex","termid":"GO:0008303"},{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00846":null,"SJAG_02776":null,"SJAG_03292":null,"SJAG_03672":null,"SJAG_05278":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005789"}],"interesting_parent_ids":["GO:0005783","GO:0032991","GO:0005737","GO:0005575","GO:0005789"],"is_obsolete":false,"name":"GPI-anchor transamidase complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"GPIT complex","type":"exact"}],"termid":"GO:0042765","terms_by_termid":{"GO:0042765":null}}


id: GO:0023038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a diffusible signal causes activation of a receptor.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signal initiation by diffusible mediator (obsolete GO:0023038)","synonyms":[{"name":"signal initiation by diffusible mediator","type":"exact"}],"termid":"GO:0023038"}


id: MONDO:0013842
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Decreased activity of the enzyme 11-beta-hydroxysteroid dehydrogenase type 1 due to inactivating mutation(s) in the HSD11B1 gene. The condition is characterized by hyperandrogenism as a result of increased adrenocorticotropic hormone stimulation of the adrenal gland due to failure of cortisol-mediated down-regulation, and is clinically indistinguishable from H6PD deficiency.","definition_xrefs":["NCIT:C131084"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cortisone reductase deficiency","termid":"MONDO:0000193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"cortisone reductase deficiency 2","secondary_identifiers":["DOID:0090140","UMLS:C3553382","MEDGEN:766296","OMIM:614662","GARD:15830"],"synonyms":[{"name":"11-beta-hydroxysteroid dehydrogenase type 1 deficiency","type":"exact"},{"name":"CORTRD2","type":"exact"},{"name":"HSD11B1 cortisone reductase deficiency","type":"exact"},{"name":"cortisone reductase deficiency 2","type":"exact"},{"name":"cortisone reductase deficiency caused by mutation in HSD11B1","type":"exact"},{"name":"cortisone reductase deficiency type 2","type":"exact"}],"termid":"MONDO:0013842","xrefs":{"Monarch":{"xref_id":"0013842"}}}


id: PBO:0027183
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_chromatin_silencing_at_centromere_outer_repeat","termid":"PBO:0027183"}


id: GO:0044192
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The inner, i.e. lumen-facing, lipid bilayer of the host cell mitochondrial envelope. It is highly folded to form cristae.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell mitochondrial membrane","termid":"GO:0044191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell mitochondrial inner membrane","termid":"GO:0044192"}


id: PBO:0077463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM184C pseudogene 1","termid":"PBO:0077463"}


id: FYECO:0000050
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which linoleic acid was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ fatty acid","termid":"FYECO:0000042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ linoleic acid","termid":"FYECO:0000050"}


id: PBO:0085919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; member of the seripauperin multigene family encoded mainly in subtelomeric regions; expression is induced after ethanol shock; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum and vacuole respectively","termid":"PBO:0085919"}


id: MONDO:0044260
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ec1 (obsolete MONDO:0044260)","secondary_identifiers":["HGNC:7832"],"synonyms":[{"name":"EC1","type":"related"},{"name":"natural Killer cell susceptibility 1","type":"related"},{"name":"susceptibility to lysis by ALLOREACTIVE natural KILLER cells","type":"related"}],"termid":"MONDO:0044260","xrefs":{"Monarch":{"xref_id":"0044260"}}}


id: GO:0050223
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3,4-dihydroxybenzoate + H+ = catechol + CO2.","definition_xrefs":["EC:4.1.1.63","RHEA:22416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"protocatechuate decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R00822","MetaCyc:PROTOCATECHUATE-DECARBOXYLASE-RXN"],"synonyms":[{"name":"3,4-dihydrobenzoate decarboxylase activity","type":"related"},{"name":"3,4-dihydroxybenzoate carboxy-lyase (catechol-forming)","type":"related"},{"name":"3,4-dihydroxybenzoate decarboxylase activity","type":"related"},{"name":"protocatechuate carboxy-lyase activity","type":"related"}],"termid":"GO:0050223"}


id: PBO:0058889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 10526","termid":"PBO:0058889"}


id: PBO:0038920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor G2","termid":"PBO:0038920"}


id: PBO:0062184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily N member 4","termid":"PBO:0062184"}


id: MONDO:0975957
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telangiectasia, impaired intellectual development, microcephaly, metaphyseal dysplasia, eye abnormalities, and short stature","secondary_identifiers":["OMIM:621056"],"termid":"MONDO:0975957","xrefs":{"Monarch":{"xref_id":"0975957"}}}


id: GO:0018785
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: haloacetate + H2O = glycolate + halide.","definition_xrefs":["EC:3.8.1.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid halide bonds, in C-halide compounds","termid":"GO:0019120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"haloacetate dehalogenase activity","secondary_identifiers":["UM-BBD_enzymeID:r1028","MetaCyc:HALOACETATE-DEHALOGENASE-RXN","RHEA:11044","UM-BBD_enzymeID:r0004"],"synonyms":[{"name":"haloacetate halidohydrolase activity","type":"related"},{"name":"monohaloacetate dehalogenase activity","type":"related"}],"termid":"GO:0018785"}


id: GO:0010688
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the synthesis of RNA from ribosomal protein genes mediated by RNA polymerase II.","definition_xrefs":["GOC:dph","GOC:txnOH","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transcription by RNA polymerase II","termid":"GO:0000122"},{"relation_name":"is_a","term_name":"regulation of ribosomal protein gene transcription by RNA polymerase II","termid":"GO:0060962"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006355","GO:0006351"],"is_obsolete":false,"name":"negative regulation of ribosomal protein gene transcription by RNA polymerase II","synonyms":[{"name":"negative regulation of ribosomal protein gene transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0010688"}


id: PBO:0074119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC30A4 antisense RNA 1","termid":"PBO:0074119"}


id: MONDO:0018714
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An intermediate, rarely metastasizing blood vessel neoplasm. It is characterized by the presence of lymphatic-like vascular channels and papillary endothelial proliferation.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemangioendothelioma","termid":"MONDO:0021121"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary intralymphatic angioendothelioma","secondary_identifiers":["NCIT:C7526","GARD:21909","MEDGEN:138037","ICDO:9135/1","Orphanet:458768","UMLS:C0346087"],"synonyms":[{"name":"Dabska tumor","type":"exact"},{"name":"Dabska tumour","type":"exact"},{"name":"PILA","type":"exact"},{"name":"malignant endothelial papillary angioendothelioma","type":"exact"},{"name":"papillary Endovascular angioendothelioma","type":"exact"},{"name":"papillary intralymphatic angioendothelioma","type":"exact"},{"name":"pila","type":"exact"}],"termid":"MONDO:0018714","xrefs":{"Monarch":{"xref_id":"0018714"}}}


id: GO:0030089
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any of the granules, approximately 32 nm x 48 nm and consisting of highly aggregated phycobiliproteins, that are attached in arrays to the external face of a thylakoid membrane in algae of the phyla Cyanophyta and Rhodophyta, where they function as light-harvesting devices in photosynthesis. Excitation energy in the phycobilisome flows in the sequence: phycoerythrin, phycocyanin, allophycocyanin before passing to the antenna chlorophyll of photosystem II.","definition_xrefs":["GOC:jl","PMID:11734882","Wikipedia:Phycobilisome"],"direct_ancestors":[{"relation_name":"is_a","term_name":"light-harvesting complex","termid":"GO:0030076"},{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"thylakoid membrane","termid":"GO:0042651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"phycobilisome","termid":"GO:0030089"}


id: PBO:0064822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 3D","termid":"PBO:0064822"}


id: PBO:0086429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative hydrolase acting on ester bonds","termid":"PBO:0086429"}


id: GO:0030175
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Thin, stiff, actin-based protrusion extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or an axonal or dendritic growth cone, or a dendritic shaft.","definition_xrefs":["GOC:pr","ISBN:0815316194","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin-based cell projection","termid":"GO:0098858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"filopodium","secondary_identifiers":["Wikipedia:Filopodia","GO:0030028","NIF_Subcellular:sao1046371754"],"termid":"GO:0030175"}


id: PBO:0061508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NRXN2 antisense RNA 1","termid":"PBO:0061508"}


id: PBO:0047777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXC1 upstream transcript","termid":"PBO:0047777"}


id: PBO:0060436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NACA pseudogene 5","termid":"PBO:0060436"}


id: PBO:0075393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sp6 transcription factor","termid":"PBO:0075393"}


id: FYPO:0002601
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H2A phosphorylation is normal. All histone H2A phosphorylation may be assayed, or phosphorylation of specific sites on histone H2A may be measured.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone phosphorylation during vegetative growth","termid":"FYPO:0002595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal histone H2A phosphorylation during vegetative growth","synonyms":[{"name":"normal histone H2A phosphorylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002601"}


id: PBO:0073573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SHISA5 pseudogene 1","termid":"PBO:0073573"}


id: PBO:0086467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative mitochondrial inner membrane protein of unknown function; although similar to paralogous Sdh3p, Shh3p is not a stoichiometric subunit of either succinate dehydrogenase or of the TIM22 translocase; SHH3 has a paralog, SDH3, that arose from the whole genome duplication","termid":"PBO:0086467"}


id: PR:000027522
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An anaphase spindle elongation protein 1 phosphorylated 1 in Schizosaccharomyces pombe. Example: UniProtKB:Q9HDY1-1, Ser-640/Ser-683/Ser-688/Ser-693, MOD:00046.","definition_xrefs":["PomBase:MAH","PMID:19686686","PMID:18257517"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anaphase spindle elongation protein 1","termid":"PR:000027517"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ase1/Phos(S640,S683,S688,S693)","pombase_gene_id":"SPAPB1A10.09","synonyms":[{"name":"PomBase_original_PRO_term_name: anaphase spindle elongation protein 1 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-ase1/Phos:1","type":"exact"},{"name":"ase1/Phos(S640,S683,S688,S693)","type":"exact"}],"termid":"PR:000027522"}


id: PBO:0047552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 10","termid":"PBO:0047552"}


id: PBO:0063640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pepsinogen A3","termid":"PBO:0063640"}


id: GO:0016586
data:
  {"annotated_genes":["SJAG_03787","SJAG_04755","SJAG_02447","SJAG_03944","SJAG_01622","SJAG_01111","SJAG_00440","SJAG_03576","SJAG_03758","SJAG_04213","SJAG_01016","SJAG_00739","SJAG_02869","SJAG_02589"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[59098,67724,72339,74715,75430,81391,81528,89471,89969,94108,95819,95962,97707,114985],"is_not":false,"summary":null,"term":"GO:0016586"}]},"cv_name":"cellular_component","definition":"A SWI/SNF-type complex that contains a bromodomain containing-protein, such as yeast Rsc1 or Rsc4 or mammalian PB1/BAF180. The RSC complex is generally recruited to RNA polymerase III promoters and is specifically recruited to RNA polymerase II promoters by transcriptional activators and repressors; it is also involved in non-homologous end joining.","definition_xrefs":["PMID:12672490","PMID:15870268","GOC:bhm","PMID:11937489","PMID:19355820","PMID:8980231"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SWI/SNF superfamily-type complex","termid":"GO:0070603"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00440":null,"SJAG_00739":null,"SJAG_01016":null,"SJAG_01111":null,"SJAG_01622":null,"SJAG_02447":null,"SJAG_02589":null,"SJAG_02869":null,"SJAG_03576":null,"SJAG_03758":null,"SJAG_03787":null,"SJAG_03944":null,"SJAG_04213":null,"SJAG_04755":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005694","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"RSC-type complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0070604"],"synonyms":[{"name":"PBAF complex","type":"exact"},{"name":"Polybromo- and BAF containing complex","type":"exact"},{"name":"SWI/SNF complex B","type":"exact"}],"termid":"GO:0016586","terms_by_termid":{"GO:0016586":null}}


id: PBO:0080031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 17","termid":"PBO:0080031"}


id: PBO:0069093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 340, pseudogene","termid":"PBO:0069093"}


id: GO:0072506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of trivalent inorganic anions within an organism or cell.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete trivalent inorganic anion homeostasis (obsolete GO:0072506)","termid":"GO:0072506"}


id: MONDO:0009938
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"congenital pulmonary valve stenosis","termid":"MONDO:0017865"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonic stenosis","secondary_identifiers":["HP:0001642","OMIM:265500","GARD:10071","MEDGEN:408291","UMLS:C1956257"],"synonyms":[{"name":"pulmonary stenosis","type":"exact"},{"name":"pulmonic stenosis","type":"exact"},{"name":"pulmonic stenosis (disease)","type":"exact"},{"name":"valvular pulmonic stenosis","type":"related"}],"termid":"MONDO:0009938","xrefs":{"Monarch":{"xref_id":"0009938"}}}


id: MONDO:0008556
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited thrombocytopenia","termid":"MONDO:0100241"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"thrombocytopenia, cyclic","secondary_identifiers":["NANDO:2100192","ICD9:287.39","MEDGEN:78799","OMIM:188020","NANDO:2200653","GARD:9862","SCTID:48788004","UMLS:C0272282","MESH:C536899"],"synonyms":[{"name":"cyclic thrombocytopenia","type":"related"},{"name":"thrombocytopenia cyclic","type":"related"},{"name":"thrombocytopenia, cyclic","type":"exact"}],"termid":"MONDO:0008556","xrefs":{"Monarch":{"xref_id":"0008556"}}}


id: GO:0080083
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of glucosidic link in beta-gentiobiose.","definition_xrefs":["PMID:15604686"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucosidase activity","termid":"GO:0008422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016798","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"beta-gentiobiose beta-glucosidase activity","termid":"GO:0080083"}


id: PBO:0058986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MLLT10 histone lysine methyltransferase DOT1L cofactor","termid":"PBO:0058986"}


id: MONDO:0009206
data:
  {"annotated_genes":["SJAG_02839"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88111],"is_not":false,"summary":null,"term":"MONDO:0009206"}]},"cv_name":"mondo","definition":"Any combined deficiency of factor V and factor VIII in which the cause of the disease is a mutation in the LMAN1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined deficiency of factor V and factor VIII","termid":"MONDO:0018175"},{"relation_name":"is_a","term_name":"inherited blood coagulation disorder","termid":"MONDO:0021181"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02839":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"factor V and factor VIII, combined deficiency of, type 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:84048006","OMIM:227300","GARD:18630","MEDGEN:1637212","UMLS:C4551981"],"synonyms":[{"name":"F5F8D1","type":"related"},{"name":"FMFD 1","type":"related"},{"name":"LMAN1 combined deficiency of factor V and factor VIII","type":"exact"},{"name":"combined deficiency of factor V and factor VIII caused by mutation in LMAN1","type":"exact"},{"name":"combined factor V and VIII deficiency","type":"exact"},{"name":"factor 5 and Factor VIII, combined deficiency of, 1","type":"exact"},{"name":"factor V and factor VIII, combined deficiency of, 1","type":"related"},{"name":"factor V and factor VIII, combined deficiency of, type 1","type":"exact"},{"name":"familial multiple coagulation Factor deficiency 1","type":"related"},{"name":"multiple coagulation Factor deficiency 1","type":"related"}],"termid":"MONDO:0009206","terms_by_termid":{"MONDO:0009206":null},"xrefs":{"Monarch":{"xref_id":"0009206"}}}


id: GO:0009414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a water deprivation stimulus, prolonged deprivation of water.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"},{"relation_name":"is_a","term_name":"response to water","termid":"GO:0009415"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to water deprivation","synonyms":[{"name":"drought tolerance","type":"related"},{"name":"response to dehydration","type":"exact"},{"name":"response to drought","type":"exact"},{"name":"response to thirst","type":"exact"}],"termid":"GO:0009414"}


id: MONDO:0003496
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete endometrial squamous cell carcinoma (obsolete MONDO:0003496)","termid":"MONDO:0003496","xrefs":{"Monarch":{"xref_id":"0003496"}}}


id: PBO:0070096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 10 pseudogene","termid":"PBO:0070096"}


id: MONDO:0002043
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The turning outward (eversion) of the edge of the eyelid, resulting in the exposure of the palpebral conjunctiva. (Dorland, 27th ed)","definition_xrefs":["MESH:D004483"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eyelid disorder","termid":"MONDO:0003382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"ectropion","secondary_identifiers":["ICD10CM:H02.1","HP:0000656","DOID:1570","SCTID:62909004","ICD9:374.10","MEDGEN:4448","UMLS:C0013592","ICD9:374.1"],"synonyms":[{"name":"ectropion","type":"exact"},{"name":"ectropion (disease)","type":"exact"},{"name":"ectropion of eyelid","type":"exact"},{"name":"everted margin","type":"exact"}],"termid":"MONDO:0002043","xrefs":{"Monarch":{"xref_id":"0002043"}}}


id: GO:0051450
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of myoblasts, resulting in the expansion of a myoblast cell population. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers.","definition_xrefs":["CL:0000056","GOC:mtg_muscle","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myoblast proliferation","termid":"GO:0051450"}


id: PBO:0004097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exonuclease I Exo1","termid":"PBO:0004097"}


id: FYPO:0004418
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell undergoes septation despite abnormal chromosome segregation, and in which the export of polyadenylated mRNA from the nucleus is decreased. The daughter cells produced by septation are both inviable. Export of all polyadenylated mRNAs or a specific mRNA may be affected.","definition_xrefs":["PMID:14511667","PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"has_part","term_name":"cut","termid":"FYPO:0000229"},{"relation_name":"has_part","term_name":"decreased poly(A)+ mRNA export from nucleus","termid":"FYPO:0002522"},{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000641"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000138"},{"rel_name":"has_part","termid":"FYPO:0006551"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0000641","FYPO:0001320","FYPO:0005447","FYPO:0000337","FYPO:0000631","FYPO:0000002","FYPO:0000138","FYPO:0000004","FYPO:0000032"],"is_obsolete":false,"name":"cut cell with decreased poly(A)+ mRNA export from nucleus","synonyms":[{"name":"cut cell with decreased poly(A)+ mRNA export from nucleus during mitotic cell cycle","type":"related"},{"name":"cut cell with decreased poly(A)+ mRNA export from nucleus during vegetative growth","type":"exact"},{"name":"cut cell with reduced poly(A)+ mRNA export from nucleus","type":"exact"},{"name":"cut with decreased poly(A)+ mRNA export from nucleus","type":"exact"},{"name":"decreased poly(A) mRNA export in cut","type":"exact"},{"name":"septation following abnormal mitotic chromosome segregation with decreased poly(A)+ mRNA export from nucleus","type":"exact"}],"termid":"FYPO:0004418"}


id: PBO:0090504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I upstream activation factor complex subunit Acr1","termid":"PBO:0090504"}


id: FYPO:0007349
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome pairing during meiosis (synapsis) is decreased (i.e. occurs to a lower extent) at a cis-acting homologous chromosome pairing region on chromosome 1.","definition_xrefs":["PMID:31811152","PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased homologous chromosome pairing at cis-acting homologous chromosome pairing region","termid":"FYPO:0003054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000641","FYPO:0001985","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"decreased homologous chromosome pairing at cis-acting homologous chromosome pairing region on chromosome 1","synonyms":[{"name":"decreased homologous chromosome pairing at meiosis at cis-acting homologous chromosome pairing region on chromosome 1","type":"exact"},{"name":"decreased homologous chromosome pairing at omt3 locus","type":"narrow"},{"name":"decreased synapsis at cis-acting homologous chromosome pairing region on chromosome 1","type":"exact"},{"name":"reduced homologous chromosome pairing at cis-acting homologous chromosome pairing region on chromosome 1","type":"exact"}],"termid":"FYPO:0007349"}


id: MONDO:0000849
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome that involves abnormality of collagen synthesis in lamellar bones, with manifestations limited to the skeleton. The initial symptom is frequently spontaneous fractures.","definition_xrefs":["DOID:0080040","PMID:7559718"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrogenesis imperfecta ossium","synonyms":[{"name":"baker's disease","type":"exact"}],"termid":"MONDO:0000849","xrefs":{"Monarch":{"xref_id":"0000849"}}}


id: PBO:0083325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps ORF SPT15/YER148W","termid":"PBO:0083325"}


id: PBO:0079577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 A","termid":"PBO:0079577"}


id: MONDO:0015615
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare genetic gastroenterological disease (obsolete MONDO:0015615)","secondary_identifiers":["Orphanet:165652"],"synonyms":[{"name":"rare genetic gastrointestinal system disease","type":"exact"}],"termid":"MONDO:0015615","xrefs":{"Monarch":{"xref_id":"0015615"}}}


id: GO:0071908
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Determination of the asymmetric location of the intestine loops with respect to the left and right halves of the organism.","definition_xrefs":["GOC:cvs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"determination of digestive tract left/right asymmetry","termid":"GO:0071907"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"determination of intestine left/right asymmetry","termid":"GO:0071908"}


id: MONDO:0014591
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant Robinow syndrome in which the cause of the disease is a mutation in the DVL1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant Robinow syndrome","termid":"MONDO:0008389"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant Robinow syndrome 2","secondary_identifiers":["MEDGEN:897039","DOID:0060765","GARD:18548","OMIM:616331","UMLS:C4225363"],"synonyms":[{"name":"DRS2","type":"exact"},{"name":"DVL1 autosomal dominant Robinow syndrome","type":"exact"},{"name":"Robinow syndrome, autosomal dominant 2","type":"related"},{"name":"Robinow syndrome, autosomal dominant type 2","type":"exact"},{"name":"autosomal dominant Robinow syndrome caused by mutation in DVL1","type":"exact"},{"name":"autosomal dominant Robinow syndrome type 2","type":"exact"}],"termid":"MONDO:0014591","xrefs":{"Monarch":{"xref_id":"0014591"}}}


id: GO:0019414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An aerobic respiration process in which a sulfur-containing molecule (hydrogen sulfide, sulfur, sulfite, thiosulfate, and various polythionates) is oxidized.","definition_xrefs":["PMID:11425697"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aerobic respiration","termid":"GO:0009060"},{"relation_name":"is_a","term_name":"energy derivation by oxidation of reduced inorganic compounds","termid":"GO:0015975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"aerobic respiration, using sulfur or sulfate as electron donor","synonyms":[{"name":"aerobic respiration, using sulphur or sulphate as electron donor","type":"exact"}],"termid":"GO:0019414"}


id: GO:0102977
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: nitrilotriacetate + O2 + FMNH2 = ammoniodiacetate + 2-oxo monocarboxylic acid anion + H2O + FMN.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete nitrilotriacetate monooxygenase activity (FMN-dependent) (obsolete GO:0102977)","termid":"GO:0102977"}


id: MONDO:0001849
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disease of orbital part of eye adnexa","termid":"MONDO:0004751"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic orbital inflammation","secondary_identifiers":["ICD9:376.1","ICD9:376.10","MEDGEN:509880","UMLS:C0155261","SCTID:44729001","DOID:1397"],"synonyms":[{"name":"chronic inflammation of orbit","type":"exact"}],"termid":"MONDO:0001849","xrefs":{"Monarch":{"xref_id":"0001849"}}}


id: GO:0071426
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a ribonucleoprotein complex from the nucleus to the cytoplasm.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete ribonucleoprotein complex export from nucleus (obsolete GO:0071426)","synonyms":[{"name":"RNP export from nucleus","type":"exact"},{"name":"ribonucleoprotein complex export from cell nucleus","type":"exact"},{"name":"ribonucleoprotein complex nucleus export","type":"exact"},{"name":"ribonucleoprotein complex transport from nucleus to cytoplasm","type":"exact"}],"termid":"GO:0071426"}


id: PBO:0082056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-5' RNA exonuclease; involved in 3'-end processing of U4 and U5 snRNAs, 5S and 5.8S rRNAs, and RNase P and RNase MRP RNA; localized to mitochondria and null suppresses escape of mtDNA to nucleus in yme1 yme2 mutants; RNase D exonuclease","termid":"PBO:0082056"}


id: GO:1900695
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of N',N'',N'''-triacetylfusarinine C biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"N',N'',N'''-triacetylfusarinine C biosynthetic process","termid":"GO:1900551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"regulation of N',N'',N'''-triacetylfusarinine C biosynthetic process","synonyms":[{"name":"regulation of N',N'',N'''-triacetylfusarinine C anabolism","type":"exact"},{"name":"regulation of N',N'',N'''-triacetylfusarinine C biosynthesis","type":"exact"},{"name":"regulation of N',N'',N'''-triacetylfusarinine C formation","type":"exact"},{"name":"regulation of N',N'',N'''-triacetylfusarinine C synthesis","type":"exact"}],"termid":"GO:1900695"}


id: GO:0052199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of enzyme activity in a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:tb","GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of catalytic activity in other organism involved in symbiotic interaction (obsolete GO:0052199)","synonyms":[{"name":"down regulation of enzyme activity in other organism during symbiotic interaction","type":"related"},{"name":"down-regulation of enzyme activity in other organism during symbiotic interaction","type":"related"},{"name":"downregulation of enzyme activity in other organism during symbiotic interaction","type":"related"},{"name":"inhibition of enzyme activity in other organism","type":"exact"},{"name":"inhibition of enzyme activity in other organism during symbiotic interaction","type":"narrow"},{"name":"negative regulation of enzyme activity in other organism during symbiotic interaction","type":"exact"}],"termid":"GO:0052199"}


id: MONDO:0022109
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete catatrichy (obsolete MONDO:0022109)","secondary_identifiers":["OMIM:116850","MESH:C535346"],"synonyms":[{"name":"forelock","type":"related"}],"termid":"MONDO:0022109","xrefs":{"Monarch":{"xref_id":"0022109"}}}


id: MONDO:0016714
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ganglioneuroblastoma (obsolete MONDO:0016714)","termid":"MONDO:0016714","xrefs":{"Monarch":{"xref_id":"0016714"}}}


id: SO:0001148
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Site which has been experimentally altered.","definition_xrefs":["UniProt:curation_manual","EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_variation_site","termid":"SO:0001146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"mutated_variant_site","secondary_identifiers":["BS:00036"],"synonyms":[{"name":"mutagen","type":"exact"},{"name":"mutagenesis","type":"exact"},{"name":"mutated_site","type":"exact"}],"termid":"SO:0001148"}


id: PBO:0059567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 1J, pseudogene","termid":"PBO:0059567"}


id: PBO:0086436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative integral membrane protein of unknown function; interacts with Ulp1p at the nuclear periphery; member of DUP240 gene family","termid":"PBO:0086436"}


id: GO:0110166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any DNA biosynthetic process that is involved in mitochondrial DNA replication.","definition_xrefs":["PMID:29931097","PMID:28408491"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial DNA metabolic process","termid":"GO:0032042"},{"relation_name":"is_a","term_name":"DNA synthesis involved in DNA replication","termid":"GO:0090592"},{"relation_name":"part_of","term_name":"mitochondrial DNA replication","termid":"GO:0006264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"part_of","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0006260","GO:0008150","GO:0007005"],"is_obsolete":false,"name":"DNA synthesis involved in mitochondrial DNA replication","synonyms":[{"name":"DNA biosynthetic process involved in mitochondrial DNA replication","type":"exact"}],"termid":"GO:0110166"}


id: GO:0030731
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + guanidinoacetate = S-adenosyl-L-homocysteine + creatine + H+.","definition_xrefs":["EC:2.1.1.2","RHEA:10656"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"guanidinoacetate N-methyltransferase activity","secondary_identifiers":["MetaCyc:GUANIDINOACETATE-N-METHYLTRANSFERASE-RXN","KEGG_REACTION:R01883"],"synonyms":[{"name":"GA methylpherase activity","type":"related"},{"name":"S-adenosyl-L-methionine:N-guanidinoacetate methyltransferase activity","type":"related"},{"name":"guanidinoacetate methyltransferase activity","type":"related"},{"name":"guanidinoacetate transmethylase activity","type":"related"},{"name":"guanidoacetate methyltransferase activity","type":"related"},{"name":"methionine-guanidinoacetic transmethylase activity","type":"related"}],"termid":"GO:0030731"}


id: PBO:0060407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAA20 pseudogene 1","termid":"PBO:0060407"}


id: PBO:0045874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 beta 2 pseudogene 7","termid":"PBO:0045874"}


id: PBO:0041403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 6 open reading frame 89","termid":"PBO:0041403"}


id: MONDO:0975839
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pancreatic agenesis","termid":"MONDO:0009832"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pancreatic agenesis 3","secondary_identifiers":["OMIM:620991"],"termid":"MONDO:0975839","xrefs":{"Monarch":{"xref_id":"0975839"}}}


id: MONDO:0001886
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"prolapse of female genital organ","termid":"MONDO:0001592"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"midline cystocele","secondary_identifiers":["DOID:14131","MEDGEN:733480","ICD10CM:N81.11","ICD9:618.01","UMLS:C1456248","SCTID:423633003"],"termid":"MONDO:0001886","xrefs":{"Monarch":{"xref_id":"0001886"}}}


id: PBO:0068693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 74, pseudogene","termid":"PBO:0068693"}


id: GO:0106231
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction:H2O + N(6)-propanoyl-L-lysyl-[protein] + NAD+ = 3''-O-propanoyl-ADP-D-ribose + L-lysyl-[protein] + nicotinamide.","definition_xrefs":["RHEA:23500","GOC:sp","PMID:30026585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD-dependent protein lysine deacylase activity","termid":"GO:0141218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003824","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"NAD-dependent protein-lysine depropionylase activity","termid":"GO:0106231"}


id: MONDO:0001420
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Benign and malignant neoplasms which arise from or metastasize to the trigeminal or fifth cranial nerve which provides sensory innervation to the face, oral cavity and sinuses and the muscles of mastication. Clinical features may include facial pain or sensory loss or weakness of jaw closure.","definition_xrefs":["NCIT:C5122"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve neoplasm","termid":"MONDO:0002633"},{"relation_name":"is_a","term_name":"trigeminal nerve disorder","termid":"MONDO:0003543"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trigeminal nerve neoplasm","secondary_identifiers":["UMLS:C1263897","DOID:1201","MEDGEN:226812","SCTID:126971002","ICD9:239.7"],"synonyms":[{"name":"cranial nerve V neoplasms","type":"exact"},{"name":"cranial nerve V tumors","type":"exact"},{"name":"cranial nerve V tumours","type":"exact"},{"name":"fifth cranial nerve neoplasm","type":"exact"},{"name":"fifth cranial nerve tumor","type":"exact"},{"name":"fifth cranial nerve tumour","type":"exact"},{"name":"neoplasm of fifth cranial nerve","type":"exact"},{"name":"neoplasm of the fifth cranial nerve","type":"exact"},{"name":"neoplasm of the trigeminal nerve","type":"exact"},{"name":"neoplasm of trigeminal nerve","type":"exact"},{"name":"neoplasms, cranial nerve V","type":"exact"},{"name":"trigeminal nerve neoplasm","type":"exact"},{"name":"trigeminal nerve neoplasm (disease)","type":"exact"},{"name":"trigeminal nerve neoplasms","type":"exact"},{"name":"trigeminal nerve tumor","type":"exact"},{"name":"trigeminal nerve tumors","type":"exact"},{"name":"trigeminal nerve tumour","type":"exact"},{"name":"trigeminal nerve tumours","type":"exact"},{"name":"tumor of fifth cranial nerve","type":"exact"},{"name":"tumor of the fifth cranial nerve","type":"exact"},{"name":"tumor of the trigeminal nerve","type":"exact"},{"name":"tumor of trigeminal nerve","type":"exact"},{"name":"tumors, cranial nerve V","type":"exact"},{"name":"tumour of fifth cranial nerve","type":"exact"},{"name":"tumour of the fifth cranial nerve","type":"exact"},{"name":"tumour of the trigeminal nerve","type":"exact"},{"name":"tumour of trigeminal nerve","type":"exact"}],"termid":"MONDO:0001420","xrefs":{"Monarch":{"xref_id":"0001420"}}}


id: PBO:0067961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 263","termid":"PBO:0067961"}


id: MONDO:0016132
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare hereditary disease with peripheral neuropathy (obsolete MONDO:0016132)","secondary_identifiers":["Orphanet:207015"],"termid":"MONDO:0016132","xrefs":{"Monarch":{"xref_id":"0016132"}}}


id: GO:0047977
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (5Z,9E,14Z)-(8x,11R,12S)-11,12-epoxy-8-hydroxyicosa-5,9,14-trienoate + H2O = (5Z,9E,14Z)-(8x,11x,12S)-8,11,12-trihydroxyicosa-5,9,14-trienoate.","definition_xrefs":["EC:3.3.2.7","MetaCyc:HEPOXILIN-EPOXIDE-HYDROLASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epoxide hydrolase activity","termid":"GO:0004301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"hepoxilin-epoxide hydrolase activity","secondary_identifiers":["Reactome:R-HSA-2161949","RHEA:16665"],"synonyms":[{"name":"(5Z,9E,14Z)-(8xi,11R,12S)-11,12-epoxy-8-hydroxyicosa-5,9,14-trienoate hydrolase activity","type":"related"},{"name":"hepoxilin A(3) hydrolase activity","type":"related"},{"name":"hepoxilin A3 hydrolase activity","type":"related"},{"name":"hepoxilin epoxide hydrolase activity","type":"related"},{"name":"hepoxylin hydrolase activity","type":"related"}],"termid":"GO:0047977"}


id: PBO:0045728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F transcription factor 7","termid":"PBO:0045728"}


id: GO:0009886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring after animal embryonic development, by which anatomical structures are generated and organized.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"post-embryonic development","termid":"GO:0009791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-embryonic animal morphogenesis","synonyms":[{"name":"post-embryonic morphogenesis of an anatomical structure","type":"exact"}],"termid":"GO:0009886"}


id: GO:0140292
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (ADP-D-ribosyl)-L-seryl-[protein] + H2O = L-seryl-[protein] + ADP-ribose.","definition_xrefs":["PMID:28650317","RHEA:58256","PMID:29234005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing N-glycosyl compounds","termid":"GO:0016799"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0016787","GO:0016798","GO:0003674"],"is_obsolete":false,"name":"ADP-ribosylserine hydrolase activity","termid":"GO:0140292"}


id: PBO:0018041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-myristoyltransferase Myr1 (predicted)","termid":"PBO:0018041"}


id: PBO:0054041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1377","termid":"PBO:0054041"}


id: MONDO:0004785
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the eyelids near the eyelashes.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eyelid disorder","termid":"MONDO:0003382"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"blepharitis","secondary_identifiers":["ICD9:373.8","MEDGEN:598","EFO:0009536","ICD9:373.0","MESH:D001762","SCTID:41446000","ICD9:373.4","ICD9:373.00","ICD9:373.9","UMLS:C0005741","NCIT:C112183","ICD10CM:H01.0","DOID:9423"],"synonyms":[{"name":"eyelid inflammation","type":"exact"},{"name":"inflammation of eyelid","type":"exact"}],"termid":"MONDO:0004785","xrefs":{"Monarch":{"xref_id":"0004785"}}}


id: PR:Q9Y884
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pek1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y884"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP kinase kinase skh1/pek1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC543.07","synonyms":[{"name":"Spom972h-pek1","type":"exact"}],"termid":"PR:Q9Y884"}


id: MONDO:0013265
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autism, susceptiblity to","termid":"MONDO:0020836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autism, susceptibility to, 17","secondary_identifiers":["MEDGEN:462043","OMIM:613436","UMLS:C3150693"],"synonyms":[{"name":"AUTS17","type":"related"},{"name":"autism susceptibility 17","type":"exact"},{"name":"autism, susceptibility to, 17","type":"exact"},{"name":"autism, susceptibility to, type 17","type":"exact"},{"name":"susceptibility to autism 17","type":"related"}],"termid":"MONDO:0013265","xrefs":{"Monarch":{"xref_id":"0013265"}}}


id: MONDO:0020528
data:
  {"annotated_genes":["SJAG_03429"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88524],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009050"}]},"cv_name":"mondo","definition":"Adrenocorticotropic hormone dependent Cushing syndrome (ACTH-dependent CS) is a form of endogenous CS caused by abnormal production of ACTH due, in 80% of cases, to ACTH oversecretion by a pituitary adenoma (Cushing disease, CD) and in 20% of cases to ectopic ACTH secretion (CS due to EAS) by an extrapituitary tumor (in 50% of cases originating in the lungs or less commonly in the thymus, pancreas, adrenal gland or thyroid) or very rarely due to a tumor secreting both ACTH and corticotrophin-releasing hormone (CRH).","definition_xrefs":["Orphanet:99892"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare male infertility due to adrenal disorder (obsolete MONDO:0018387)","termid":"MONDO:0018387"},{"relation_name":"excluded_subClassOf","term_name":"obsolete rare female infertility due to an adrenal disorder (obsolete MONDO:0018400)","termid":"MONDO:0018400"},{"relation_name":"is_a","term_name":"hyperpituitarism","termid":"MONDO:0006793"},{"relation_name":"is_a","term_name":"Cushing syndrome","termid":"MONDO:0018912"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03429":null},"genotype_count":0,"is_obsolete":false,"name":"ACTH-dependent Cushing syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:190502001","ICD10CM:E24.0","MESH:D047748","MedDRA:10035109","SCTID:237734007","UMLS:C0342442","GARD:19699","EFO:1001110","icd11.foundation:212778081","DOID:3946","MEDGEN:575036","NCIT:C113210"],"synonyms":[{"name":"ACTH hypersecretion, pituitary","type":"related"},{"name":"ACTH-dependent CS","type":"exact"},{"name":"adrenocorticotropic hormone, inappropriate secretion","type":"related"},{"name":"adrenocorticotropic hormone-dependent Cushing syndrome","type":"exact"},{"name":"corticotropin-dependent Cushing syndrome","type":"exact"},{"name":"overproduction of ACTH","type":"exact"},{"name":"pituitary Cushing disease","type":"related"},{"name":"pituitary Cushing diseases","type":"related"},{"name":"pituitary Cushing syndrome","type":"related"},{"name":"pituitary-dependent Cushing disease","type":"exact"},{"name":"pituitary-dependent Cushing's disease","type":"exact"}],"termid":"MONDO:0020528","terms_by_termid":{"MONDO:0009050":null},"xrefs":{"Monarch":{"xref_id":"0020528"}}}


id: GO:0099637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of neurotransmitter receptors.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transport","termid":"GO:0015031"},{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"neurotransmitter receptor transport","termid":"GO:0099637"}


id: GO:0060850
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the commitment of a cell to a specific fate.","definition_xrefs":["GOC:dph","GOC:tb","GOC:sdb_2009"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription involved in cell fate commitment (obsolete GO:0060850)","termid":"GO:0060850"}


id: PBO:0002776
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae VHT1","termid":"PBO:0002776"}


id: GO:0044606
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: protein-serine-choline phosphate + H2O = protein-serine + choline phosphate.","definition_xrefs":["GOC:sp","PMID:22158903"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides","termid":"GO:0016818"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"phosphocholine hydrolase activity","termid":"GO:0044606"}


id: GO:0003016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process carried out by the organs or tissues of the respiratory system. The respiratory system is an organ system responsible for respiratory gaseous exchange.","definition_xrefs":["GOC:mtg_cardio","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system process","termid":"GO:0003008"},{"relation_name":"part_of","term_name":"respiratory gaseous exchange by respiratory system","termid":"GO:0007585"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"respiratory system process","secondary_identifiers":["GO:0010802"],"synonyms":[{"name":"respiratory gaseous exchange","type":"exact"}],"termid":"GO:0003016"}


id: PBO:0041241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 109","termid":"PBO:0041241"}


id: GO:0097558
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cilium (also called flagellum) found in Giardia species (trophozoite stage). It is nucleated by the left ventral basal body and exits the cell body proximally and dorsal to the ventral disc.","definition_xrefs":["PMID:5961344","PMID:16607022","GOC:giardia","ISBN:9780124260207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"9+2 motile cilium","termid":"GO:0097729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"left ventral flagellum","synonyms":[{"name":"left ventral cilium","type":"exact"}],"termid":"GO:0097558"}


id: PBO:0068557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 8, pseudogene","termid":"PBO:0068557"}


id: PR:P52822
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl501 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P52822"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L5-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H5.12c","synonyms":[{"name":"Spom972h-rpl501","type":"exact"}],"termid":"PR:P52822"}


id: PBO:0043425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclic nucleotide gated channel subunit alpha 3","termid":"PBO:0043425"}


id: GO:0070353
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the zinc finger transcription factor GATA1, the LIM domain protein Lmo2 (RBTN2), the basic helix-loop-helix protein TAL1 and its binding partner TCF3. The complex is involved transcriptional regulation in hematopoiesis.","definition_xrefs":["PMID:7568177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"GATA1-TAL1-TCF3-Lmo2 complex","termid":"GO:0070353"}


id: PBO:0080565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat and coiled coil containing","termid":"PBO:0080565"}


id: PBO:0058912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 12130","termid":"PBO:0058912"}


id: PBO:0001436
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human MAPRE1","termid":"PBO:0001436"}


id: FYPO:0006355
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which transcription begins later than normal when the cell is subject to glucose starvation. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transcription during glucose starvation","termid":"FYPO:0006354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000294","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"delayed onset of transcription during glucose starvation","synonyms":[{"name":"delayed onset of transcription during cellular response to glucose starvation","type":"exact"},{"name":"delayed onset of transcription during glucose depletion","type":"exact"},{"name":"delayed onset of transcription during glucose deprivation","type":"exact"},{"name":"delayed onset of transcription during glucose limitation","type":"related"},{"name":"delayed onset of transcription in response to glucose starvation","type":"exact"},{"name":"delayed transcription during glucose starvation","type":"exact"}],"termid":"FYPO:0006355"}


id: GO:0048262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Determination of asymmetry from the dorsal to the ventral side; as, the dorsoventral axis.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"determination of bilateral symmetry","termid":"GO:0009855"},{"relation_name":"part_of","term_name":"dorsal/ventral pattern formation","termid":"GO:0009953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"determination of dorsal/ventral asymmetry","synonyms":[{"name":"determination of adaxial/abaxial asymmetry","type":"related"},{"name":"determination of dorsal-ventral asymmetry","type":"exact"},{"name":"determination of dorsoventral asymmetry","type":"exact"}],"termid":"GO:0048262"}


id: GO:0072727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a CCCP stimulus.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular response to CCCP (obsolete GO:0072727)","synonyms":[{"name":"cellular response to carbonyl cyanide m-chlorophenyl hydrazone","type":"exact"}],"termid":"GO:0072727"}


id: GO:0032201
data:
  {"annotated_genes":["SJAG_03624"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98998],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0032215"}]},"cv_name":"biological_process","definition":"The process in which telomeric DNA is synthesized semi-conservatively by the conventional replication machinery and telomeric accessory factors as part of cell cycle DNA replication.","definition_xrefs":["GOC:BHF","GOC:BHF_telomere","GOC:vw","GOC:rl","PMID:16598261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomere maintenance","termid":"GO:0000723"},{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"part_of","term_name":"nuclear DNA replication","termid":"GO:0033260"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03624":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0032200"}],"interesting_parent_ids":["GO:0007049","GO:0006260","GO:0006259","GO:0008150","GO:0032200"],"is_obsolete":false,"name":"telomere maintenance via semi-conservative replication","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-174417"],"synonyms":[{"name":"equal telomere replication","type":"related"},{"name":"telomeric fork progression","type":"narrow"},{"name":"telomeric replication fork progression","type":"narrow"}],"termid":"GO:0032201","terms_by_termid":{"GO:0032215":null}}


id: PBO:0053182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte receptor cluster member 1","termid":"PBO:0053182"}


id: GO:0043300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of leukocyte degranulation.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune effector process","termid":"GO:0002697"},{"relation_name":"is_a","term_name":"regulation of regulated secretory pathway","termid":"GO:1903305"},{"relation_name":"regulates","term_name":"leukocyte degranulation","termid":"GO:0043299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of leukocyte degranulation","synonyms":[{"name":"regulation of immune cell degranulation","type":"exact"},{"name":"regulation of immune cell granule exocytosis","type":"exact"},{"name":"regulation of leucocyte degranulation","type":"exact"},{"name":"regulation of leukocyte granule exocytosis","type":"exact"}],"termid":"GO:0043300"}


id: PBO:0111333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal nucleolar protein, implicated in rDNA metabolism or ribosome biogenesis","termid":"PBO:0111333"}


id: GO:1990294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The phosphorylation of a peptidyl-threonine to form peptidyl-O-phospho-L-threonine on an identical protein. For example, phosphorylation by the other kinase within a homodimer.","definition_xrefs":["PMID:19357077"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-threonine trans-autophosphorylation (obsolete GO:1990294)","termid":"GO:1990294"}


id: SO:0001709
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 27th residue (a lysine), from the start of the H3 histone protein is tri-methylated.","direct_ancestors":[{"relation_name":"is_a","term_name":"H3K27_methylation_site","termid":"SO:0001732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K27_trimethylation_site","synonyms":[{"name":"H3K27 tri-methylation site","type":"exact"},{"name":"H3K27Me3","type":"related"}],"termid":"SO:0001709"}


id: PBO:0069825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1111, pseudogene","termid":"PBO:0069825"}


id: GO:1905410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of mitotic cohesin unloading.","definition_xrefs":["PMID:26687354","GO_REF:0000058","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of mitotic cohesin unloading (obsolete GO:1905410)","termid":"GO:1905410"}


id: PBO:0073687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIVA1 apoptosis inducing factor","termid":"PBO:0073687"}


id: MONDO:0008665
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ptosis-vocal cord paralysis syndrome is a rare, hereditary disorder with ptosis characterized by the combination of congenital bilateral recurrent laryngeal nerve paralysis and congenital bilateral ptosis. There have been no further descriptions in the literature since 1983.","definition_xrefs":["Orphanet:2997"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ptosis-vocal cord paralysis syndrome","secondary_identifiers":["GARD:427","MEDGEN:349807","MESH:C536923","OMIM:193240","UMLS:C1860403"],"synonyms":[{"name":"congenital bilateral recurrent nerve paralysis and ptosis","type":"related"},{"name":"ptosis vocal cord paralysis","type":"related"},{"name":"tucker syndrome","type":"exact"},{"name":"vocal cord paralysis and ptosis","type":"related"}],"termid":"MONDO:0008665","xrefs":{"Monarch":{"xref_id":"0008665"}}}


id: PBO:0050599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxy-delta-5-steroid dehydrogenase, 3 beta, pseudogene 4","termid":"PBO:0050599"}


id: MONDO:0020397
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Parachute tricuspid valve is a rare congenital heart malformation defined as an insertion of the chordal apparatus into a single papillary muscle or a muscle group, making a pathognomonic 'pear' shape sign in the four-chamber echocardiographic view with the atrium forming the larger base of the pear and the leaflets the apex. Isolated parachute tricuspid valve may be asymptomatic or present with symptoms of tricuspid stenosis (diastolic inspiratory murmur, pulsation of jugular veins, hepatomegaly, edema, epigastric discomfort, right atrial enlargement, right ventricular hypertrophy, electrocardiography abnormalities). It may also be associated with other heart malformations and present with symptoms of the complex of malformations.","definition_xrefs":["Orphanet:99056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital tricuspid malformation","termid":"MONDO:0020289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"parachute tricuspid valve","secondary_identifiers":["MEDGEN:576478","UMLS:C0344755","GARD:19624"],"termid":"MONDO:0020397","xrefs":{"Monarch":{"xref_id":"0020397"}}}


id: PR:O74172
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps2501 gene.","definition_xrefs":["UniProtKB:O74172","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S25-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3D6.15","synonyms":[{"name":"S31-B (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rps2501","type":"exact"}],"termid":"PR:O74172"}


id: GO:0070450
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is formed by the association of a heterodimeric interleukin-4 receptor complex with an interleukin-4 molecule.","definition_xrefs":["GOC:mah","PMID:10358772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"interleukin4-interleukin-4 receptor complex","synonyms":[{"name":"IL4-IL4 receptor complex","type":"exact"},{"name":"IL4-IL4R-IL2RG complex","type":"narrow"}],"termid":"GO:0070450"}


id: PBO:0055369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2798","termid":"PBO:0055369"}


id: PR:Q9Y7T4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atg1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7T4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase atg1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC63.08c","synonyms":[{"name":"Spom972h-atg1","type":"exact"},{"name":"autophagy-related protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"serine/threonine-protein kinase ppk36 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y7T4"}


id: PBO:0068858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 98, pseudogene","termid":"PBO:0068858"}


id: MONDO:0019601
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Autosomal recessive form of axonal hereditary motor and sensory neuropathy.","definition_xrefs":["MONDO:patterns/autosomal_recessive"],"gene_count":0,"genotype_count":0,"name":"obsolete autosomal recessive axonal hereditary motor and sensory neuropathy (obsolete MONDO:0019601)","secondary_identifiers":["Orphanet:91024"],"synonyms":[{"name":"AR-CMT2","type":"exact"},{"name":"autosomal recessive axonal Charcot-Marie-Tooth disease type 2","type":"exact"},{"name":"axonal hereditary motor and sensory neuropathy, autosomal recessive","type":"exact"}],"termid":"MONDO:0019601","xrefs":{"Monarch":{"xref_id":"0019601"}}}


id: PBO:0087413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit 5 of the stator stalk of mitochondrial F1F0 ATP synthase; F1F0 ATP synthase is a large, evolutionarily conserved enzyme complex required for ATP synthesis; homologous to bovine subunit OSCP (oligomycin sensitivity-conferring protein); phosphorylated","termid":"PBO:0087413"}


id: PBO:0083208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the verified ORF FRT1","termid":"PBO:0083208"}


id: GO:0048347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of paraxial mesoderm cell fate determination.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mesodermal cell fate determination","termid":"GO:0048335"},{"relation_name":"is_a","term_name":"regulation of paraxial mesodermal cell fate determination","termid":"GO:0048345"},{"relation_name":"negatively_regulates","term_name":"paraxial mesodermal cell fate determination","termid":"GO:0048344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of paraxial mesodermal cell fate determination","synonyms":[{"name":"down regulation of paraxial mesodermal cell fate determination","type":"exact"},{"name":"down-regulation of paraxial mesodermal cell fate determination","type":"exact"},{"name":"downregulation of paraxial mesodermal cell fate determination","type":"exact"},{"name":"inhibition of paraxial mesodermal cell fate determination","type":"narrow"}],"termid":"GO:0048347"}


id: PBO:0065400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit alpha 3 pseudogene 1","termid":"PBO:0065400"}


id: PBO:0075013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-24","termid":"PBO:0075013"}


id: MONDO:0018519
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete squamous cell carcinoma of the anal canal (obsolete MONDO:0018519)","termid":"MONDO:0018519","xrefs":{"Monarch":{"xref_id":"0018519"}}}


id: PBO:0068843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 81, pseudogene","termid":"PBO:0068843"}


id: PBO:0053688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 881","termid":"PBO:0053688"}


id: PR:Q9URY2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- alp7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9URY2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule protein alp7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC890.02c","synonyms":[{"name":"Spom972h-alp7","type":"exact"},{"name":"TACC protein mia1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"altered polarity protein 7 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"transforming acidic coiled-coil protein mia1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9URY2"}


id: GO:0061350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors signal via downstream effectors including C-Jun N-terminal kinase (JNK) to modulate cytoskeletal elements and control cell polarity that contributes to the shaping of the cardiac muscle tissue.","definition_xrefs":["GOC:dph","GOC:mtg_heart","PMID:19056682"],"gene_count":0,"genotype_count":0,"name":"obsolete planar cell polarity pathway involved in cardiac muscle tissue morphogenesis (obsolete GO:0061350)","termid":"GO:0061350"}


id: PBO:0083570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified ORF MRS1","termid":"PBO:0083570"}


id: PBO:0064486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase nu","termid":"PBO:0064486"}


id: GO:0031978
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by a plastid thylakoid membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thylakoid lumen","termid":"GO:0031977"},{"relation_name":"part_of","term_name":"plastid thylakoid","termid":"GO:0031976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"plastid thylakoid lumen","termid":"GO:0031978"}


id: MOD:01087
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a 2,4,5-trichlorophenyl group for a hydrogen atom.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2,4,5-trichlorophenyl modified residue","termid":"MOD:01087"}


id: MONDO:0000306
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fungal infections caused by trichosporon that may become systemic especially in an immunocompromised host. Clinical manifestations range from superficial cutaneous infections to systemic lesions in multiple organs.","definition_xrefs":["MESH:D060586"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opportunistic systemic mycosis","termid":"MONDO:0045033"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trichosporonosis","secondary_identifiers":["UMLS:C0343939","DOID:0050290","SCTID:240761008","MEDGEN:452453"],"synonyms":[{"name":"Trichosporon caused disease or disorder","type":"exact"},{"name":"Trichosporon disease or disorder","type":"exact"},{"name":"Trichosporon infectious disease","type":"exact"}],"termid":"MONDO:0000306","xrefs":{"Monarch":{"xref_id":"0000306"}}}


id: PBO:0002148
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"focus formation at heterochromatic regions, Swi5_dependent","termid":"PBO:0002148"}


id: GO:0047817
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-arginine + H2O = D-ornithine + urea.","definition_xrefs":["RHEA:12901","EC:3.5.3.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"D-arginase activity","secondary_identifiers":["MetaCyc:D-ARGINASE-RXN","KEGG_REACTION:R02458"],"synonyms":[{"name":"D-arginine amidinohydrolase activity","type":"related"}],"termid":"GO:0047817"}


id: GO:0017067
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phospho-5'-adenylyl sulfate + L-tyrosine methyl ester = L-tyrosine methyl ester 4-sulfate + adenosine 3',5'-diphosphate + H+.","definition_xrefs":["EC:2.8.2.9","RHEA:19977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016782"],"is_obsolete":false,"name":"tyrosine-ester sulfotransferase activity","secondary_identifiers":["MetaCyc:TYROSINE-ESTER-SULFOTRANSFERASE-RXN","GO:0008128","KEGG_REACTION:R04213"],"synonyms":[{"name":"3'-phosphoadenylyl-sulfate:L-tyrosine-methyl-ester sulfotransferase activity","type":"related"},{"name":"L-tyrosine methyl ester sulfotransferase activity","type":"related"},{"name":"aryl sulfotransferase IV","type":"related"},{"name":"tyrosine-ester sulphotransferase activity","type":"exact"}],"termid":"GO:0017067"}


id: PBO:0056972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 26b","termid":"PBO:0056972"}


id: FYPO:0004997
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to a region in a chromosome is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization","termid":"FYPO:0003627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to chromosome","synonyms":[{"name":"normal protein localisation to chromosome","type":"exact"}],"termid":"FYPO:0004997"}


id: MONDO:0003599
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare malignant adipose tissue neoplasm of the vulva.","definition_xrefs":["NCIT:C40321"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liposarcoma","termid":"MONDO:0005060"},{"relation_name":"is_a","term_name":"vulva sarcoma","termid":"MONDO:0005214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"vulvar liposarcoma","secondary_identifiers":["UMLS:C2184082","MEDGEN:412161","DOID:5711"],"synonyms":[{"name":"liposarcoma of mammalian vulva","type":"exact"},{"name":"mammalian vulva liposarcoma","type":"exact"},{"name":"vulvar liposarcoma","type":"exact"}],"termid":"MONDO:0003599","xrefs":{"Monarch":{"xref_id":"0003599"}}}


id: GO:0047988
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-3-hydroxybutanoate + 2-oxoglutarate = acetoacetate + (R)-2-hydroxyglutarate.","definition_xrefs":["MetaCyc:HYDROXYACID-OXOACID-TRANSHYDROGENASE-RXN","EC:1.1.99.24"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"hydroxyacid-oxoacid transhydrogenase activity","secondary_identifiers":["Reactome:R-HSA-880033","Reactome:R-HSA-880002"],"synonyms":[{"name":"(S)-3-hydroxybutanoate:2-oxoglutarate oxidoreductase activity","type":"related"},{"name":"transhydrogenase, hydroxy acid-oxo acid","type":"related"}],"termid":"GO:0047988"}


id: GO:0047077
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O2 + ATP + Photinus luciferin = light + diphosphate + AMP + CO2 + oxidized Photinus luciferin.","definition_xrefs":["EC:1.13.12.7","MetaCyc:1.13.12.7-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)","termid":"GO:0016703"},{"relation_name":"is_a","term_name":"luciferin monooxygenase activity","termid":"GO:0045289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"Photinus-luciferin 4-monooxygenase (ATP-hydrolyzing) activity","secondary_identifiers":["RHEA:10732"],"synonyms":[{"name":"Photinus luciferin 4-monooxygenase (adenosine triphosphate-hydrolyzing)","type":"related"},{"name":"Photinus pyralis luciferase activity","type":"related"},{"name":"Photinus-luciferin 4-monooxygenase (ATP-hydrolysing)","type":"related"},{"name":"Photinus-luciferin:oxygen 4-oxidoreductase (decarboxylating, ATP-hydrolysing)","type":"related"},{"name":"firefly luciferase activity","type":"related"},{"name":"firefly luciferin luciferase activity","type":"related"},{"name":"luciferase (firefly luciferin)","type":"related"},{"name":"luciferase activity","type":"broad"}],"termid":"GO:0047077"}


id: GO:0102637
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 5-ammoniolevulinate + coenzyme A + ATP = 5-aminolevulinyl-CoA + AMP + diphosphoric acid.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 5-aminolevulinate-CoA ligase activity (obsolete GO:0102637)","termid":"GO:0102637"}


id: GO:0005328
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: neurotransmitter(out) + Na+(out) = neurotransmitter(in) + Na+(in).","definition_xrefs":["TC:2.A.22.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter transmembrane transporter activity","termid":"GO:0005326"},{"relation_name":"is_a","term_name":"solute:sodium symporter activity","termid":"GO:0015370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"neurotransmitter:sodium symporter activity","synonyms":[{"name":"sodium/neurotransmitter symporter activity","type":"exact"}],"termid":"GO:0005328"}


id: FYPO:0007670
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, is normal length, and has one nucleus and one septum. The septum divides the cell into two compartments, one of which contains the nucleus.","definition_xrefs":["PMID:9862966","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable vegetative cell with normal cell morphology","termid":"FYPO:0002199"},{"relation_name":"is_a","term_name":"inviable mononucleate monoseptate vegetative cell with anucleate compartment","termid":"FYPO:0002303"},{"relation_name":"is_a","term_name":"normal vegetative cell length","termid":"FYPO:0003503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000337"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0000257","FYPO:0000002","FYPO:0005447","FYPO:0001312","FYPO:0000004","FYPO:0000337","FYPO:0000641","FYPO:0001320"],"is_obsolete":false,"name":"inviable mononucleate monoseptate vegetative cell with anucleate compartment and normal cell length","synonyms":[{"name":"inviable mononucleate monoseptate cell with anucleate compartment and normal cell length during vegetative growth","type":"exact"},{"name":"inviable mononucleate monoseptate vegetative cell with normal cell length","type":"exact"},{"name":"inviable mononucleate monoseptate vegetative cell with normal cell length during mitotic cell cycle","type":"related"},{"name":"inviable with septation in the absence of nuclear division; normal cell length","type":"related"},{"name":"inviable with septation independent of mitosis, normal cell length","type":"related"},{"name":"inviable with septation without nuclear division; normal cell length","type":"related"},{"name":"lethal; mononucleate monoseptate vegetative cell with normal cell length","type":"exact"}],"termid":"FYPO:0007670"}


id: PBO:0052637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 5","termid":"PBO:0052637"}


id: PBO:0117108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RHOBTB2 antisense RNA 1","termid":"PBO:0117108"}


id: PBO:0049771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 4 pseudogene 9","termid":"PBO:0049771"}


id: MONDO:0004401
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Malignant testicular germ cell tumor that is resistant to treatment.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant testicular germ cell tumor","termid":"MONDO:0003510"},{"relation_name":"is_a","term_name":"refractory malignant neoplasm","termid":"MONDO:0036501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"testis refractory cancer","secondary_identifiers":["MEDGEN:235122","UMLS:C1377904","DOID:7928","NCIT:C9077"],"synonyms":[{"name":"refractory cancer of testis","type":"exact"},{"name":"refractory cancer of the testis","type":"exact"},{"name":"refractory malignant testicular germ cell tumor","type":"exact"},{"name":"refractory malignant testicular germ cell tumour","type":"exact"},{"name":"refractory testicular cancer","type":"exact"},{"name":"refractory testicular carcinoma","type":"exact"}],"termid":"MONDO:0004401","xrefs":{"Monarch":{"xref_id":"0004401"}}}


id: MONDO:0012444
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"PLA2G6-associated neurodegeneration","termid":"MONDO:0017998"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005066","MONDO:0002039"],"is_obsolete":false,"name":"neurodegeneration with brain iron accumulation 2B","secondary_identifiers":["UMLS:C1857747","GARD:10688","MEDGEN:346658","DOID:0110736","NANDO:1200538","OMIM:610217"],"synonyms":[{"name":"Karak syndrome","type":"related"},{"name":"NBIA2B","type":"exact"},{"name":"NBIA2b","type":"exact"},{"name":"atypical neuroaxonal dystrophy","type":"related"},{"name":"early-onset progressive cerebellar ataxia dystonia spasticity and intellectual decline","type":"related"},{"name":"neuroaxonal dystrophy, atypical","type":"exact"},{"name":"neurodegeneration with brain iron accumulation 2B","type":"exact"},{"name":"neurodegeneration with brain iron accumulation type 2B","type":"exact"},{"name":"neurodegeneration with brain iron accumulation type 2b","type":"exact"},{"name":"neurodegeneration with brain iron accumulation, Pla2G6-related","type":"related"},{"name":"neurodegeneration with brain iron accumulation, Pla2g6-related","type":"exact"}],"termid":"MONDO:0012444","xrefs":{"Monarch":{"xref_id":"0012444"}}}


id: PR:O94292
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 50S ribosomal protein L14 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03758","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L38, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC887.07","secondary_identifiers":["UniProtKB:O94292"],"synonyms":[{"name":"Spom972h-rplN","type":"exact"}],"termid":"PR:O94292"}


id: PBO:0082695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the kinetochore-associated Ndc80 complex; conserved coiled-coil protein involved in chromosome segregation, spindle checkpoint activity, and kinetochore assembly and clustering; evolutionarily conserved; complex members include Ndc80p, Nuf2p, Scp24p, and Spc25p; modified by sumoylation","termid":"PBO:0082695"}


id: PBO:0001263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP kinase kinase kinase Wis4","termid":"PBO:0001263"}


id: GO:0008746
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: NADPH + H+ + NAD+ = NADP+ + NADH + H+.","definition_xrefs":["EC:1.6.1.2"],"gene_count":0,"genotype_count":0,"name":"obsolete NAD(P)+ transhydrogenase activity (obsolete GO:0008746)","termid":"GO:0008746"}


id: PBO:0045379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPP3 divergent transcript","termid":"PBO:0045379"}


id: GO:0042601
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Portion of the cell formed during the process of bacterial sporulation that will ultimately become the core of the endospore. An endospore is a type of dormant cell that is resistant to adverse conditions.","definition_xrefs":["ISBN:0697286029","GOC:jl","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular immature spore","termid":"GO:0042763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"endospore-forming forespore","termid":"GO:0042601"}


id: PBO:0028438
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_filipin","termid":"PBO:0028438"}


id: MONDO:0013339
data:
  {"annotated_genes":["SJAG_01671"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88850],"is_not":false,"summary":null,"term":"MONDO:0013339"}]},"cv_name":"mondo","definition":"Any familial isolated dilated cardiomyopathy in which the cause of the disease is a mutation in the SDHA gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated dilated cardiomyopathy","termid":"MONDO:0700335"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dilated cardiomyopathy 1GG","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:15684","MEDGEN:462248","OMIM:613642","UMLS:C3150898","DOID:0110435"],"synonyms":[{"name":"CMD1GG","type":"exact"},{"name":"SDHA familial isolated dilated cardiomyopathy","type":"exact"},{"name":"cardiomyopathy, dilated, 1GG","type":"related"},{"name":"cardiomyopathy, dilated, type 1Gg","type":"exact"},{"name":"dilated cardiomyopathy type 1GG","type":"exact"},{"name":"familial isolated dilated cardiomyopathy caused by mutation in SDHA","type":"exact"}],"termid":"MONDO:0013339","terms_by_termid":{"MONDO:0013339":null},"xrefs":{"Monarch":{"xref_id":"0013339"}}}


id: PBO:0000784
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.2.1.-","termid":"PBO:0000784"}


id: PBO:0064661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A like 4D","termid":"PBO:0064661"}


id: SO:0000848
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The long terminal repeat found at the ends of the sequence to be inserted into the host genome.","direct_ancestors":[{"relation_name":"is_a","term_name":"repeat_component","termid":"SO:0000840"},{"relation_name":"part_of","term_name":"long_terminal_repeat","termid":"SO:0000286"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LTR_component","synonyms":[{"name":"LTR component","type":"exact"},{"name":"long term repeat component","type":"exact"}],"termid":"SO:0000848"}


id: PBO:0068643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 24, pseudogene","termid":"PBO:0068643"}


id: GO:0034579
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: fumarate + n-hexane = (1-methylpentyl)succinate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete (1-methylpentyl)succinate synthase activity (obsolete GO:0034579)","termid":"GO:0034579"}


id: MONDO:0005205
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete systemic lupus erythematosus (obsolete MONDO:0005205)","termid":"MONDO:0005205","xrefs":{"Monarch":{"xref_id":"0005205"}}}


id: PBO:0047609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"four and a half LIM domains 5","termid":"PBO:0047609"}


id: PBO:0072046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 16","termid":"PBO:0072046"}


id: SO:0001140
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Gamma turns, defined for 3 residues i, i+1, i+2 if a hydrogen bond exists between residues i and i+2 and the phi and psi angles of residue i+1 fall within 40 degrees: phi(i+1)=-79.0 - psi(i+1)=69.0.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gamma_turn","termid":"SO:0001138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"gamma_turn_inverse","secondary_identifiers":["BS:00221"],"synonyms":[{"name":"gamma turn inverse","type":"exact"}],"termid":"SO:0001140"}


id: PBO:0044328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 8","termid":"PBO:0044328"}


id: GO:0036225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of vitamin B1 (also called thiamin and thiamine).","definition_xrefs":["GOC:al","Wikipedia:Thiamine"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to starvation","termid":"GO:0009267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to vitamin B1 starvation","synonyms":[{"name":"cellular response to thiamin starvation","type":"exact"},{"name":"cellular response to vitamin B1 deprivation","type":"exact"}],"termid":"GO:0036225"}


id: MONDO:1011998
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vision disorder, non-human animal","termid":"MONDO:1011367"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary open angle glaucoma, non-human animal","secondary_identifiers":["OMIA:002046"],"termid":"MONDO:1011998","xrefs":{"Monarch":{"xref_id":"1011998"}}}


id: MONDO:0014506
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any leukodystrophy in which the cause of the disease is a mutation in the RARS gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hypomyelinating leukodystrophy 9","secondary_identifiers":["OMIM:616140","Orphanet:438114","UMLS:C4015323","GARD:17734","DOID:0060791","MEDGEN:863760"],"synonyms":[{"name":"HLD9","type":"exact"},{"name":"RARS leukodystrophy","type":"exact"},{"name":"RARS-related autosomal recessive hypomyelinating leukodystrophy","type":"exact"},{"name":"hypomyelinating leukodystrophy type 9","type":"exact"},{"name":"leukodystrophy caused by mutation in RARS","type":"exact"},{"name":"leukodystrophy, hypomyelinating, 9","type":"related"},{"name":"leukodystrophy, hypomyelinating, type 9","type":"exact"}],"termid":"MONDO:0014506","xrefs":{"Monarch":{"xref_id":"0014506"}}}


id: GO:0016784
data:
  {"annotated_genes":["SJAG_04113"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77075],"is_not":false,"summary":null,"term":"GO:0016784"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxo-3-sulfanylpropanoate + [thioredoxin]-dithiol = [thioredoxin]-disulfide + hydrogen sulfide + pyruvate + H+. Note that 2-oxo-3-sulfanylpropanoate is also known as 3-mercaptopyruvate.","definition_xrefs":["RHEA:21740"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfurtransferase activity","termid":"GO:0016783"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04113":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016782"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016782"],"is_obsolete":false,"name":"3-mercaptopyruvate sulfurtransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:MERCAPYSTRANS-RXN","EC:2.8.1.2"],"synonyms":[{"name":"3-mercaptopyruvate sulphurtransferase activity","type":"exact"},{"name":"3-mercaptopyruvate:cyanide sulfurtransferase activity","type":"related"},{"name":"beta-mercaptopyruvate sulfurtransferase activity","type":"related"},{"name":"mercaptopyruvate sulfurtransferase activity","type":"exact"}],"termid":"GO:0016784","terms_by_termid":{"GO:0016784":null}}


id: MONDO:0015497
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hypoglossia/aglossia (obsolete MONDO:0015497)","secondary_identifiers":["icd11.foundation:2087939516","Orphanet:156212"],"termid":"MONDO:0015497","xrefs":{"Monarch":{"xref_id":"0015497"}}}


id: PBO:0047899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(7)(q22)","termid":"PBO:0047899"}


id: PBO:0069001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 245, pseudogene","termid":"PBO:0069001"}


id: FYPO:0005310
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 14 of histone H3 occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone acetylation during vegetative growth","termid":"FYPO:0000332"},{"relation_name":"is_a","term_name":"abnormal histone H3-K14 acetylation during vegetative growth","termid":"FYPO:0000788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002274","FYPO:0001985","FYPO:0002494","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased histone H3-K14 acetylation during vegetative growth","synonyms":[{"name":"increased histone H3-K14 acetylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005310"}


id: PBO:0030038
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_minichromosome_loss","termid":"PBO:0030038"}


id: PBO:0071132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 134","termid":"PBO:0071132"}


id: FYPO:0001715
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of succinate into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"abnormal succinate import","synonyms":[{"name":"abnormal succinate import across plasma membrane","type":"exact"},{"name":"abnormal succinate import during mitotic cell cycle","type":"related"},{"name":"abnormal succinate import during vegetative growth","type":"exact"},{"name":"abnormal succinate import into cell","type":"exact"},{"name":"abnormal succinate uptake","type":"exact"},{"name":"abnormal succinic acid import","type":"related"}],"termid":"FYPO:0001715"}


id: PBO:0049076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 107","termid":"PBO:0049076"}


id: MONDO:1011986
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"progressive retinal atrophy, non-human animal","termid":"MONDO:1011977"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progressive rod-cone degeneration, non-human animal","secondary_identifiers":["OMIA:001298"],"termid":"MONDO:1011986","xrefs":{"Monarch":{"xref_id":"1011986"}}}


id: PBO:0071751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L41 pseudogene 7","termid":"PBO:0071751"}


id: PBO:0077569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 275","termid":"PBO:0077569"}


id: GO:0060974
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a cell from one site to another that contribute to the formation of the heart. The initial heart structure is made up of mesoderm-derived heart progenitor cells and neural crest-derived cells.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration involved in heart development","termid":"GO:0060973"},{"relation_name":"part_of","term_name":"heart formation","termid":"GO:0060914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell migration involved in heart formation","termid":"GO:0060974"}


id: MONDO:0003255
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An exceptionally rare, generally benign, granular cell tumor that arises from the mediastinum. All the reported cases were located in the posterior mediastinum.","definition_xrefs":["NCIT:C6601"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"mediastinal neural neoplasm","termid":"MONDO:0003098"},{"relation_name":"is_a","term_name":"granular cell tumor","termid":"MONDO:0006235"},{"relation_name":"is_a","term_name":"neoplasm of mediastinum","termid":"MONDO:0021386"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediastinal granular cell myoblastoma","secondary_identifiers":["DOID:5046","UMLS:C1334656","MEDGEN:235309"],"synonyms":[{"name":"granular cell myoblastoma of mediastinum","type":"exact"},{"name":"granular cell myoblastoma of the mediastinum","type":"exact"},{"name":"granular cell neoplasm of mediastinum","type":"exact"},{"name":"granular cell neoplasm of the mediastinum","type":"exact"},{"name":"granular cell tumor of mediastinum","type":"exact"},{"name":"granular cell tumor of the mediastinum","type":"exact"},{"name":"granular cell tumour of mediastinum","type":"exact"},{"name":"granular cell tumour of the mediastinum","type":"exact"},{"name":"mediastinal granular cell myoblastoma","type":"exact"},{"name":"mediastinal granular cell neoplasm","type":"exact"},{"name":"mediastinal granular cell tumor","type":"exact"},{"name":"mediastinal granular cell tumour","type":"exact"},{"name":"mediastinum granular cell tumor","type":"exact"},{"name":"mediastinum granular cell tumour","type":"exact"}],"termid":"MONDO:0003255","xrefs":{"Monarch":{"xref_id":"0003255"}}}


id: MONDO:0024618
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An disease or disorder caused by infection with Enterovirus C.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enterovirus infectious disease","termid":"MONDO:0005747"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poliovirus infection","secondary_identifiers":["MEDGEN:928804","SCTID:721764008","UMLS:C4303135"],"synonyms":[{"name":"Enterovirus C caused disease or disorder","type":"exact"},{"name":"Enterovirus C disease or disorder","type":"exact"},{"name":"Enterovirus C infectious disease","type":"exact"},{"name":"human poliovirus infection","type":"exact"},{"name":"infection caused by human poliovirus","type":"exact"}],"termid":"MONDO:0024618","xrefs":{"Monarch":{"xref_id":"0024618"}}}


id: GO:1904654
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of lung alveolus development.","definition_xrefs":["GOC:TermGenie","PMID:23962064","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of lung alveolus development","termid":"GO:1904653"},{"relation_name":"negatively_regulates","term_name":"lung alveolus development","termid":"GO:0048286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lung alveolus development","synonyms":[{"name":"down regulation of alveolarization","type":"exact"},{"name":"down regulation of alveologenesis","type":"exact"},{"name":"down regulation of lung alveolus development","type":"exact"},{"name":"down-regulation of alveolarization","type":"exact"},{"name":"down-regulation of alveologenesis","type":"exact"},{"name":"down-regulation of lung alveolus development","type":"exact"},{"name":"downregulation of alveolarization","type":"exact"},{"name":"downregulation of alveologenesis","type":"exact"},{"name":"downregulation of lung alveolus development","type":"exact"},{"name":"inhibition of alveolarization","type":"narrow"},{"name":"inhibition of alveologenesis","type":"narrow"},{"name":"inhibition of lung alveolus development","type":"narrow"},{"name":"negative regulation of alveolarization","type":"exact"},{"name":"negative regulation of alveologenesis","type":"exact"}],"termid":"GO:1904654"}


id: PBO:0054284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1675","termid":"PBO:0054284"}


id: GO:0075003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of an appressorium of the symbiont to its host via adhesion molecules. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adhesion of symbiont infection structure to host","termid":"GO:0075001"},{"relation_name":"part_of","term_name":"appressorium formation","termid":"GO:0075016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adhesion of symbiont appressorium to host","synonyms":[{"name":"adhesion of symbiont appressorium to host during symbiotic interaction","type":"exact"}],"termid":"GO:0075003"}


id: PBO:0086099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein related to mammalian high mobility group (HMG) proteins; nuclear protein; essential for function of H/ACA-type snoRNPs, which are involved in 18S rRNA processing","termid":"PBO:0086099"}


id: PBO:0059021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 10","termid":"PBO:0059021"}


id: GO:0030297
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of a transmembrane receptor protein tyrosine kinase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein tyrosine kinase activator activity","termid":"GO:0030296"},{"relation_name":"is_a","term_name":"signaling receptor activator activity","termid":"GO:0030546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0140677","GO:0030234","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"transmembrane receptor protein tyrosine kinase activator activity","termid":"GO:0030297"}


id: PBO:0046445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erythropoietin","termid":"PBO:0046445"}


id: PBO:0040392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V1 subunit E1","termid":"PBO:0040392"}


id: MONDO:1012884
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Parkinson disease that occurs in rhesus monkeys due to a mutation in the SNCA gene created by genetic engineering or gene editing.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Parkinson disease, non-human animal","termid":"MONDO:1012984"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Parkinson disease, SNCA-related, rhesus monkey","secondary_identifiers":["OMIA:002378-9544"],"termid":"MONDO:1012884","xrefs":{"Monarch":{"xref_id":"1012884"}}}


id: GO:1901485
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of transcription factor catabolic process.","definition_xrefs":["PMID:22833559","GOC:al","GOC:TermGenie","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription factor catabolic process (obsolete GO:1901485)","synonyms":[{"name":"activation of proteasome-mediated transcription factor catabolism","type":"exact"},{"name":"activation of sequence-specific DNA binding transcription factor catabolic process","type":"exact"},{"name":"activation of transcription factor breakdown","type":"exact"},{"name":"activation of transcription factor catabolic process","type":"narrow"},{"name":"activation of transcription factor catabolism","type":"exact"},{"name":"activation of transcription factor degradation","type":"exact"},{"name":"positive regulation of proteasome-mediated transcription factor catabolism","type":"exact"},{"name":"positive regulation of sequence-specific DNA binding transcription factor catabolic process","type":"exact"},{"name":"positive regulation of transcription factor breakdown","type":"exact"},{"name":"positive regulation of transcription factor catabolism","type":"exact"},{"name":"positive regulation of transcription factor degradation","type":"exact"},{"name":"up regulation of proteasome-mediated transcription factor catabolism","type":"exact"},{"name":"up regulation of sequence-specific DNA binding transcription factor catabolic process","type":"exact"},{"name":"up regulation of transcription factor breakdown","type":"exact"},{"name":"up regulation of transcription factor catabolic process","type":"exact"},{"name":"up regulation of transcription factor catabolism","type":"exact"},{"name":"up regulation of transcription factor degradation","type":"exact"},{"name":"up-regulation of proteasome-mediated transcription factor catabolism","type":"exact"},{"name":"up-regulation of sequence-specific DNA binding transcription factor catabolic process","type":"exact"},{"name":"up-regulation of transcription factor breakdown","type":"exact"},{"name":"up-regulation of transcription factor catabolic process","type":"exact"},{"name":"up-regulation of transcription factor catabolism","type":"exact"},{"name":"up-regulation of transcription factor degradation","type":"exact"},{"name":"upregulation of proteasome-mediated transcription factor catabolism","type":"exact"},{"name":"upregulation of sequence-specific DNA binding transcription factor catabolic process","type":"exact"},{"name":"upregulation of transcription factor breakdown","type":"exact"},{"name":"upregulation of transcription factor catabolic process","type":"exact"},{"name":"upregulation of transcription factor catabolism","type":"exact"},{"name":"upregulation of transcription factor degradation","type":"exact"}],"termid":"GO:1901485"}


id: PBO:0054767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2179","termid":"PBO:0054767"}


id: PBO:0053176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LEM domain containing 1","termid":"PBO:0053176"}


id: PR:O74865
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dph7 gene.","definition_xrefs":["UniProtKB:O74865","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthine methyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18.15","synonyms":[{"name":"Spom972h-dph7","type":"exact"},{"name":"WD repeat-containing protein rrt2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"diphthamide biosynthesis protein 7 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74865"}


id: GO:0060660
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the epidermis of the nipple sheath is uplifted to form an umbrella-like projection.","definition_xrefs":["PMID:12558599","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermis morphogenesis","termid":"GO:0048730"},{"relation_name":"part_of","term_name":"nipple morphogenesis","termid":"GO:0060658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epidermis morphogenesis involved in nipple formation","termid":"GO:0060660"}


id: PR:O13788
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ssr1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13788"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF and RSC complexes subunit ssr1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G6.10","synonyms":[{"name":"Spom972h-ssr1","type":"exact"}],"termid":"PR:O13788"}


id: GO:0052462
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism modulates the frequency, rate or extent of phagocytosis, the engulfing by phagocytes of external particulate material, in the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by host of symbiont phagocytosis (obsolete GO:0052462)","termid":"GO:0052462"}


id: PR:Q9Y7J3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1778.07 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7J3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carnosine N-methyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1778.07","synonyms":[{"name":"Spom972h-SPBC1778.07","type":"exact"}],"termid":"PR:Q9Y7J3"}


id: GO:0004533
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the exonucleolytic cleavage of RNA to 5'-phosphomonoester oligonucleotides in both 5' to 3' and 3' to 5' directions.","definition_xrefs":["EC:3.1.13.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA exonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0140098","GO:0016787","GO:0004527","GO:0003824","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"exoribonuclease H activity","secondary_identifiers":["MetaCyc:3.1.13.2-RXN"],"synonyms":[{"name":"retroviral reverse transcriptase RNaseH","type":"related"}],"termid":"GO:0004533"}


id: PBO:0034609
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination_with_elongated_germ_tube_and_fragmented_nucleus","termid":"PBO:0034609"}


id: GO:0043085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the activity of an enzyme.","definition_xrefs":["GOC:vw","GOC:jl","GOC:ebc","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of molecular function","termid":"GO:0044093"},{"relation_name":"is_a","term_name":"regulation of catalytic activity","termid":"GO:0050790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of catalytic activity","secondary_identifiers":["GO:0048554"],"synonyms":[{"name":"activation of enzyme activity","type":"narrow"},{"name":"activation of metalloenzyme activity","type":"narrow"},{"name":"positive regulation of enzyme activity","type":"exact"},{"name":"positive regulation of metalloenzyme activity","type":"narrow"},{"name":"stimulation of enzyme activity","type":"narrow"},{"name":"stimulation of metalloenzyme activity","type":"narrow"},{"name":"up regulation of enzyme activity","type":"exact"},{"name":"up regulation of metalloenzyme activity","type":"narrow"},{"name":"up-regulation of enzyme activity","type":"exact"},{"name":"up-regulation of metalloenzyme activity","type":"narrow"},{"name":"upregulation of enzyme activity","type":"exact"},{"name":"upregulation of metalloenzyme activity","type":"narrow"}],"termid":"GO:0043085"}


id: PBO:0055632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3071","termid":"PBO:0055632"}


id: PBO:0030785
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_small_vegetative_cell","termid":"PBO:0030785"}


id: PBO:0076608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1D26 antisense RNA 1","termid":"PBO:0076608"}


id: PBO:0079185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific protein Y-linked 14, pseudogene","termid":"PBO:0079185"}


id: PBO:0117087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP2R1A antisense RNA 1","termid":"PBO:0117087"}


id: PBO:0085989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; required for proliferation or remodeling of the ER that is caused by overexpression of Hmg2p; may interact with ribosomes, based on co-purification experiments; HER1 has a paralog, GIP3, that arose from the whole genome duplication","termid":"PBO:0085989"}


id: MONDO:1010516
data:
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id: PBO:0041824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CARS1 antisense RNA 1","termid":"PBO:0041824"}


id: PBO:0039618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANXA2R antisense RNA 1","termid":"PBO:0039618"}


id: FYPO:0003006
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during a cellular response to caffeine.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during vegetative growth","termid":"FYPO:0001838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0002274"],"is_obsolete":false,"name":"decreased protein phosphorylation during cellular response to caffeine","synonyms":[{"name":"decreased protein phosphorylation during cellular response to caffeine during mitotic cell cycle","type":"related"},{"name":"decreased protein phosphorylation during cellular response to caffeine during vegetative growth","type":"exact"},{"name":"reduced protein phosphorylation during cellular response to caffeine","type":"exact"}],"termid":"FYPO:0003006"}


id: PBO:0064253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain containing A2","termid":"PBO:0064253"}


id: PR:Q92355
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sen1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q92355"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"helicase sen1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G9.10c","synonyms":[{"name":"Spom972h-sen1","type":"exact"}],"termid":"PR:Q92355"}


id: PBO:0002889
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-aminobutyrate aminotransferase (GABA transaminase)","termid":"PBO:0002889"}


id: GO:0005201
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of the extracellular matrix.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005198"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"extracellular matrix structural constituent","synonyms":[{"name":"core extracellular matrix","type":"broad"},{"name":"core matrisome","type":"broad"},{"name":"extracellular matrix glycoprotein","type":"narrow"}],"termid":"GO:0005201"}


id: MONDO:0009614
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive form of methylmalonic aciduria, caused by mutation(s) in the MMAB gene, encoding cob(I)yrinic acid a,c-diamide adenosyltransferase, mitochondrial.","definition_xrefs":["NCIT:C142172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin B12-responsive methylmalonic acidemia","termid":"MONDO:0017214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"methylmalonic aciduria, cblB type","secondary_identifiers":["Orphanet:79311","DOID:0060743","MEDGEN:344420","NANDO:2201106","GARD:9479","UMLS:C1855102","NANDO:1200796","OMIM:251110"],"synonyms":[{"name":"methylmalonic acidemia cblB type","type":"exact"},{"name":"methylmalonic acidemia, cblB type","type":"exact"},{"name":"methylmalonic aciduria cblB type","type":"exact"},{"name":"methylmalonic aciduria, cblB type","type":"exact"},{"name":"methylmalonic aciduria, vitamin B12-responsive, cblB type","type":"exact"},{"name":"methylmalonic aciduria, vitamin B12-responsive, due to defect in synthesis of adenosylcobalamin, cblB complementation type","type":"exact"},{"name":"methylmalonic aciduria, vitamin B12-responsive, due to defect in synthesis of adenosylcobalamin, cblB type","type":"related"},{"name":"vitamin B12-responsive methylmalonic acidemia type cblB","type":"exact"},{"name":"vitamin B12-responsive methylmalonic aciduria, type cblB","type":"exact"}],"termid":"MONDO:0009614","xrefs":{"Monarch":{"xref_id":"0009614"}}}


id: FYPO:0007503
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a histone demethylase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin organization","termid":"FYPO:0000642"},{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0005447","FYPO:0001985","FYPO:0000654","FYPO:0000002","FYPO:0000661","FYPO:0000641"],"is_obsolete":false,"name":"abnormal histone demethylase activity","termid":"FYPO:0007503"}


id: PBO:0054560
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1962","termid":"PBO:0054560"}


id: PBO:0043006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine rich hydrophobic domain 1","termid":"PBO:0043006"}


id: MONDO:0016641
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"limb transversal defect-cardiac anomaly syndrome","secondary_identifiers":["Orphanet:2492","MEDGEN:419705","MESH:C535856","UMLS:C2931047"],"synonyms":[{"name":"Hecht-Scott syndrome","type":"exact"}],"termid":"MONDO:0016641","xrefs":{"Monarch":{"xref_id":"0016641"}}}


id: PBO:0078603
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 60 pseudogene 16","termid":"PBO:0078603"}


id: PBO:0090284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Prp19 complex subunit Prp45","termid":"PBO:0090284"}


id: MONDO:0000881
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete myeloid and lymphoid neoplasms with eosinophilia and abnormalities of PDGFRA, PDGFRB, and FGFR1 (obsolete MONDO:0000881)","termid":"MONDO:0000881","xrefs":{"Monarch":{"xref_id":"0000881"}}}


id: PR:Q9Y7J0
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1778.03c gene.","definition_xrefs":["UniProtKB:Q9Y7J0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH pyrophosphatase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1778.03c","synonyms":[{"name":"Spom972h-SPBC1778.03c","type":"exact"}],"termid":"PR:Q9Y7J0"}


id: MONDO:0850107
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"infectious disorder of the nervous system","termid":"MONDO:0020010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"postinfectious cerebellitis","secondary_identifiers":["Orphanet:624244","UMLS:C5575321","MEDGEN:1843009","GARD:22502"],"termid":"MONDO:0850107","xrefs":{"Monarch":{"xref_id":"0850107"}}}


id: PBO:0028691
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_spindle_pole_body_organization","termid":"PBO:0028691"}


id: MONDO:0020783
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"angioosteohypertrophic syndrome","termid":"MONDO:0007864"},{"relation_name":"is_a","term_name":"capillary malformation-arteriovenous malformation syndrome","termid":"MONDO:0012016"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capillary malformation-arteriovenous malformation 1","secondary_identifiers":["Orphanet:90307","UMLS:C4747394","MEDGEN:1648501","GARD:9787","OMIM:608355","SCTID:234143003","ICD9:759.6","OMIM:608354"],"synonyms":[{"name":"CAPILLARY MALFORMATION-ARTERIOVENOUS MALFORMATION 1","type":"exact"},{"name":"CMAVM1","type":"exact"},{"name":"Capillary Malformation-Arteriovenous Malformation","type":"broad"},{"name":"PKWS","type":"exact"},{"name":"Parkes Weber syndrome","type":"exact"},{"name":"capillary malformation-arteriovenous malformation 1","type":"exact"}],"termid":"MONDO:0020783","xrefs":{"Monarch":{"xref_id":"0020783"}}}


id: GO:0052880
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a diphenol, or related compound, acts as a hydrogen or electron donor and reduces a copper protein.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on diphenols and related substances as donors","termid":"GO:0016679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on diphenols and related substances as donors, with copper protein as acceptor","secondary_identifiers":["EC:1.10.9.-"],"termid":"GO:0052880"}


id: MONDO:1011105
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any polycystic kidney disease that occurs in cats due to a mutation in the PKD2 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polycystic kidney disease, domestic cat","termid":"MONDO:1011054"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystic kidney disease, PKD2-related, domestic cat","secondary_identifiers":["OMIA:002525-9685"],"synonyms":[{"name":"polycystic kidney disease-2, domestic cat","type":"related"}],"termid":"MONDO:1011105","xrefs":{"Monarch":{"xref_id":"1011105"}}}


id: PBO:0030408
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-polysaccharide_absent_from_cell","termid":"PBO:0030408"}


id: PBO:0059687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 53","termid":"PBO:0059687"}


id: PBO:0091986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf meiotic drive antidote Wtf23","termid":"PBO:0091986"}


id: MONDO:1010672
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary macrothrombocytes and mild-to-moderate thrombocytopenia with a bleeding tendency in dogs due to a variation in the GP9 gene.","definition_xrefs":["PMID:31484196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"thrombopathia, dog","termid":"MONDO:1012273"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bernard-Soulier syndrome, GP9-related, dog","secondary_identifiers":["OMIA:002207-9615"],"synonyms":[{"name":"Bernard-Soulier syndrome type C, dog","type":"related"},{"name":"hemorrhagiparous thrombocytic dystrophy, dog","type":"exact"}],"termid":"MONDO:1010672","xrefs":{"Monarch":{"xref_id":"1010672"}}}


id: PBO:0044812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 108A","termid":"PBO:0044812"}


id: PBO:0081901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 853","termid":"PBO:0081901"}


id: PBO:0077938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPX2 microtubule nucleation factor","termid":"PBO:0077938"}


id: PBO:0061757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-acyl-ADP-ribose deacylase 1","termid":"PBO:0061757"}


id: GO:0097702
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any response to fluid shear stress where the fluid is moving across a solid surface with an oscillatory flow. Disturbed flow patterns at the arterial bifurcations and curvatures may cause endothelial dysfunction, which initiates atherosclerosis.","definition_xrefs":["GOC:bc","GOC:BHF","PMID:21768538","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to fluid shear stress","termid":"GO:0034405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to oscillatory fluid shear stress","termid":"GO:0097702"}


id: GO:0006324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent alteration of one or more amino acid residues within a histone protein that takes place during, and results in a modification pattern characteristic of, S phase of the cell cycle.","definition_xrefs":["GOC:mah","PMID:9990026"],"gene_count":0,"genotype_count":0,"name":"obsolete S phase-specific histone modification (obsolete GO:0006324)","synonyms":[{"name":"S phase-specific histone modification","type":"exact"},{"name":"S-phase-specific histone modification","type":"exact"}],"termid":"GO:0006324"}


id: PBO:0002736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTD phosphatase Fcp1","termid":"PBO:0002736"}


id: GO:0016206
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a catechol + S-adenosyl-L-methionine = a guaiacol + H+ + S-adenosyl-L-homocysteine. Acts on catechols and on catecholamines such as adrenaline or noradrenaline.","definition_xrefs":["EC:2.1.1.6","RHEA:17877"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016741","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"catechol O-methyltransferase activity","secondary_identifiers":["Reactome:R-HSA-175983","MetaCyc:CATECHOL-O-METHYLTRANSFERASE-RXN","Reactome:R-HSA-8955010"],"synonyms":[{"name":"COMT I","type":"related"},{"name":"COMT II","type":"related"},{"name":"MB-COMT (membrane-bound form of catechol-O-methyltransferase)","type":"related"},{"name":"S-COMT (soluble form of catechol-O-methyltransferase)","type":"related"},{"name":"S-adenosyl-L-methionine:catechol O-methyltransferase activity","type":"related"},{"name":"catechol methyltransferase activity","type":"related"},{"name":"catecholamine O-methyltransferase activity","type":"related"}],"termid":"GO:0016206"}


id: PBO:0000054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dh repeats","termid":"PBO:0000054"}


id: PR:Q09888
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug160 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 160 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC584.14","synonyms":[{"name":"Spom972h-mug160","type":"exact"}],"termid":"PR:Q09888"}


id: MONDO:0021680
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any of the several infectious disorders caused by members of streptococcus, a genus of gram positive bacteria belonging to the family Streptococcaceae. Streptococcal infections are classified into Groups A, B, C, D and G.","definition_xrefs":["NCIT:C87062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gram-positive bacterial infections","termid":"MONDO:0021679"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"streptococcal infection","secondary_identifiers":["MESH:D013290","SCTID:85769006","UMLS:C0038395","ICD9:041.00","ICD9:041.09","MEDGEN:20963","EFO:1001476"],"synonyms":[{"name":"Streptococcus caused disease or disorder","type":"exact"},{"name":"Streptococcus disease or disorder","type":"exact"},{"name":"Streptococcus infectious disease","type":"exact"},{"name":"infection, streptococcal","type":"related"},{"name":"infections, streptococcal","type":"related"},{"name":"streptococcal infection","type":"exact"}],"termid":"MONDO:0021680","xrefs":{"Monarch":{"xref_id":"0021680"}}}


id: PBO:0053025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine aminopeptidase 3 pseudogene 1","termid":"PBO:0053025"}


id: PBO:0083100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-dependent ATPase that stimulates strand exchange; modifies the topology of double-stranded DNA; involved in the recombinational repair of double-strand breaks in DNA during vegetative growth and meiosis; member of the SWI/SNF family of DNA translocases; forms nuclear foci upon DNA replication stress","termid":"PBO:0083100"}


id: PBO:0043289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain containing 7A","termid":"PBO:0043289"}


id: MONDO:1011878
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sensory ataxic neuropathy, non-human animal","secondary_identifiers":["OMIA:001467"],"termid":"MONDO:1011878","xrefs":{"Monarch":{"xref_id":"1011878"}}}


id: MONDO:0004661
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from the tracheal mucosa and is confined to the epithelial layer without evidence of further tissue invasion.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trachea squamous cell carcinoma","termid":"MONDO:0001419"},{"relation_name":"is_a","term_name":"squamous carcinoma in situ","termid":"MONDO:0004693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"trachea carcinoma in situ","secondary_identifiers":["ICD10CM:D02.1","ICD9:231.1","MEDGEN:57816","DOID:8802","NCIT:C3639","UMLS:C0154070","SCTID:92772005"],"synonyms":[{"name":"carcinoma in situ of the trachea","type":"exact"},{"name":"carcinoma in situ of trachea","type":"exact"},{"name":"severe epithelial dysplasia of trachea","type":"exact"},{"name":"stage 0 trachea carcinoma","type":"exact"},{"name":"trachea carcinoma in situ","type":"exact"},{"name":"trachea in situ carcinoma","type":"exact"},{"name":"tracheal carcinoma in situ","type":"exact"}],"termid":"MONDO:0004661","xrefs":{"Monarch":{"xref_id":"0004661"}}}


id: MONDO:0002460
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cancer that involves the lacrimal apparatus.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"ocular cancer","termid":"MONDO:0002236"},{"relation_name":"is_a","term_name":"lacrimal apparatus disorder","termid":"MONDO:0001854"},{"relation_name":"is_a","term_name":"ocular cancer","termid":"MONDO:0002236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005328"],"is_obsolete":false,"name":"lacrimal system cancer","secondary_identifiers":["SCTID:416510003","UMLS:C1334361","NCIT:C5102","MEDGEN:272790","DOID:292"],"synonyms":[{"name":"cancer of lacrimal apparatus","type":"exact"},{"name":"lacrimal apparatus cancer","type":"exact"},{"name":"lacrimal system neoplasm","type":"exact"},{"name":"lacrimal system neoplasms","type":"exact"},{"name":"lacrimal system tumor","type":"exact"},{"name":"lacrimal system tumour","type":"exact"},{"name":"malignant lacrimal apparatus neoplasm","type":"exact"},{"name":"malignant neoplasm of lacrimal apparatus","type":"exact"},{"name":"neoplasm of lacrimal system","type":"exact"},{"name":"neoplasm of the lacrimal system","type":"exact"},{"name":"tumor of lacrimal system","type":"exact"},{"name":"tumor of the lacrimal system","type":"exact"},{"name":"tumour of lacrimal system","type":"exact"},{"name":"tumour of the lacrimal system","type":"exact"}],"termid":"MONDO:0002460","xrefs":{"Monarch":{"xref_id":"0002460"}}}


id: GO:0007510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell fate determination process in which a cell becomes capable of differentiating autonomously into a cardioblast cell regardless of its environment; upon determination, the cell fate cannot be reversed. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac cell fate determination","termid":"GO:0060913"},{"relation_name":"part_of","term_name":"cardioblast cell fate commitment","termid":"GO:0042684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardioblast cell fate determination","termid":"GO:0007510"}


id: PBO:0046275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"essential meiotic structure-specific endonuclease subunit 2","termid":"PBO:0046275"}


id: PBO:0044002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CUB and Sushi multiple domains 2","termid":"PBO:0044002"}


id: PBO:0018241
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"provides a telomeric cap that prevents Ku from recognising telomeres as double strand breaks (Ku-dependent end-to-end fusions)","termid":"PBO:0018241"}


id: PBO:0079353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha 1a","termid":"PBO:0079353"}


id: GO:0048243
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of norepinephrine by a cell. Norepinephrine is a catecholamine and it acts as a hormone and as a neurotransmitter of most of the sympathetic nervous system.","definition_xrefs":["GOC:ef","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"norepinephrine transport","termid":"GO:0015874"},{"relation_name":"is_a","term_name":"signal release","termid":"GO:0023061"},{"relation_name":"is_a","term_name":"catecholamine secretion","termid":"GO:0050432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"norepinephrine secretion","synonyms":[{"name":"noradrenaline secretion","type":"exact"}],"termid":"GO:0048243"}


id: PBO:0044872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENND3 antisense RNA 1","termid":"PBO:0044872"}


id: FYPO:0005480
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal during a cellular response to arsenite ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during cellular hyperosmotic response","termid":"FYPO:0001265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002494","FYPO:0000002","FYPO:0002274","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased protein phosphorylation during cellular response to arsenite ion","synonyms":[{"name":"increased protein phosphorylation during cellular response to arsenite","type":"exact"},{"name":"increased protein phosphorylation during cellular response to arsenite ion during mitotic cell cycle","type":"related"},{"name":"increased protein phosphorylation during cellular response to arsenite ion during vegetative growth","type":"exact"}],"termid":"FYPO:0005480"}


id: GO:0071700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the olfactory placode to attain its fully functional state. The olfactory placode is a thickening of the neural ectoderm in the head region of the vertebrate embryo which develops into the olfactory region of the nasal cavity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure maturation","termid":"GO:0071695"},{"relation_name":"part_of","term_name":"olfactory placode development","termid":"GO:0071698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olfactory placode maturation","termid":"GO:0071700"}


id: MONDO:0009297
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial Renal Glucosuria (FRG) is characterized by the presence of persistent isolated glucosuria in the absence of both generalized proximal tubular dysfunction and hyperglycemia. FRG is usually considered a benign entity as most patients are not affected by severe clinical consequences. Polyuria and enuresis and later a mild growth and pubertal maturation delay are the only manifestations that have been reported during a follow-up period of 30 years. Episodic dehydration and ketosis during pregnancy and starvation and an increased incidence of urinary tract infections have occasionally been reported in severe cases. FRG is caused by loss-of-function mutations in the gene SLC5A2 (16p11.2).","definition_xrefs":["Orphanet:69076"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete nephropathy secondary to a storage or other metabolic disease (obsolete MONDO:0019743)","termid":"MONDO:0019743"},{"relation_name":"is_a","term_name":"renal tubular transport disease","termid":"MONDO:0006510"},{"relation_name":"is_a","term_name":"glucose transport disorder","termid":"MONDO:0019226"},{"relation_name":"is_a","term_name":"inherited kidney disorder","termid":"MONDO:0100191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"familial renal glucosuria","secondary_identifiers":["ICD9:271.4","NORD:1658","OMIM:233100","SCTID:267430007","MEDGEN:757652","UMLS:C3245525","GARD:7548","icd11.foundation:381783069","MESH:D006030","MedDRA:10038457","DOID:9432"],"synonyms":[{"name":"GLYS","type":"related"},{"name":"Glys1","type":"related"},{"name":"Renal Glycosuria","type":"exact"},{"name":"SGLT2 deficiency","type":"exact"},{"name":"familial renal glucosuria","type":"exact"},{"name":"glycosuria, renal","type":"related"},{"name":"renal diabetes","type":"exact"},{"name":"renal glucosuria","type":"related"},{"name":"renal glycosuria","type":"related"}],"termid":"MONDO:0009297","xrefs":{"Monarch":{"xref_id":"0009297"}}}


id: PBO:0057525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 642b","termid":"PBO:0057525"}


id: GO:0048809
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of analia are generated and organized. The analia is the posterior-most vertral appendage that develops from the genital disc. An example of this process is analia morphogenesis in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"genital disc morphogenesis","termid":"GO:0007483"},{"relation_name":"part_of","term_name":"analia development","termid":"GO:0007487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"analia morphogenesis","termid":"GO:0048809"}


id: PBO:0012007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Rrp12 (predicted)","termid":"PBO:0012007"}


id: PBO:0116707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily G member 3 (gene/pseudogene)","termid":"PBO:0116707"}


id: PBO:0073658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIN3 transcription regulator family member A","termid":"PBO:0073658"}


id: PBO:0051326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2-14 (pseudogene)","termid":"PBO:0051326"}


id: PBO:0046244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELOVL fatty acid elongase 1","termid":"PBO:0046244"}


id: PBO:0043555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type IV alpha 4 chain","termid":"PBO:0043555"}


id: PBO:0087459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of a heterodimeric guanine nucleotide exchange factor (GEF); subunit of the Mon1-Ccz1 GEF complex which stimulates nucleotide exchange and activation of Ypt7p, a Rab family GTPase involved in membrane tethering and fusion events at the late endosome and vacuole; GEF activity is stimulated by membrane association and anionic phospholipids; role in localizing Ypt7p to the vacuolar membrane; required for autophagy, the CVT pathway and mitophagy; potential Cdc28 substrate","termid":"PBO:0087459"}


id: PBO:0056869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MICAL like 2","termid":"PBO:0056869"}


id: MONDO:0021155
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked form of cone-rod dystrophy.","definition_xrefs":["MONDO:patterns/x_linked"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked disease","termid":"MONDO:0000425"},{"relation_name":"is_a","term_name":"cone-rod dystrophy","termid":"MONDO:0015993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"X-linked cone-rod dystrophy","synonyms":[{"name":"cone-rod dystrophy, X-linked","type":"exact"}],"termid":"MONDO:0021155","xrefs":{"Monarch":{"xref_id":"0021155"}}}


id: MOD:02038
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces one hydrogen atom of an L-histidine residue with one methyl group.","definition_xrefs":["OMSSA:77","Unimod:34#H","DeltaMass:215"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monomethylated residue","termid":"MOD:00599"},{"relation_name":"is_a","term_name":"methylated histidine","termid":"MOD:00661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"monomethylated L-histidine","synonyms":[{"name":"MOD_RES Methylhistidine","type":"exact"},{"name":"Me1His","type":"exact"},{"name":"Methyl","type":"related"},{"name":"methylh","type":"exact"}],"termid":"MOD:02038"}


id: PBO:0043870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cAMP responsive element binding protein 1","termid":"PBO:0043870"}


id: PBO:0067757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 56","termid":"PBO:0067757"}


id: MONDO:0006570
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A long-term skin condition that mainly affects the skin of the genitals. It usually causes itching and white patches to appear on the affected skin.","definition_xrefs":["EFO:1000724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"lichen disease","secondary_identifiers":["MEDGEN:507920","ICD9:697","ICD9:697.9","SCTID:88996004","ICD9:697.8","UMLS:C0023643","DOID:8574"],"synonyms":[{"name":"lichen","type":"exact"},{"name":"lichen condition","type":"related"}],"termid":"MONDO:0006570","xrefs":{"Monarch":{"xref_id":"0006570"}}}


id: GO:0010833
data:
  {"annotated_genes":["SJAG_05979","SJAG_01677","SJAG_00939","SJAG_01864","SJAG_04266","SJAG_03855","SJAG_01378","SJAG_04586","SJAG_03092","SJAG_02194","SJAG_03685","SJAG_02212"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75863,81599,93657],"is_not":false,"summary":null,"term":"GO:0010833"},{"annotations":[78795],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032210"},{"annotations":[115685,92451,109958,117808,82033,72412,71378,81970],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007004"}]},"cv_name":"biological_process","definition":"Any process that contributes to the maintenance of proper telomeric length and structure by affecting and monitoring the activity of telomeric proteins and lengthening the telomeric DNA.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomere maintenance","termid":"GO:0000723"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00939":null,"SJAG_01378":null,"SJAG_01677":null,"SJAG_01864":null,"SJAG_02194":null,"SJAG_02212":null,"SJAG_03092":null,"SJAG_03685":null,"SJAG_03855":null,"SJAG_04266":null,"SJAG_04586":null,"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0032200"],"is_obsolete":false,"name":"telomere maintenance via telomere lengthening","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0010833","terms_by_termid":{"GO:0007004":null,"GO:0010833":null,"GO:0032210":null}}


id: SO:0000150
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence obtained from a single sequencing experiment. Typically a read is produced when a base calling program interprets information from a chromatogram trace file produced from a sequencing machine.","definition_xrefs":["SO:rd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"assembly_component","termid":"SO:0000143"},{"relation_name":"part_of","term_name":"contig","termid":"SO:0000149"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"read","termid":"SO:0000150"}


id: PBO:0077870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPM4 pseudogene 1","termid":"PBO:0077870"}


id: PBO:0082893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cyclin-dependent kinase inhibitor; activated by environmental stress; interacts with and inhibits the Cdc28p/Cln2p, G1/S phase cyclin-dependent kinase complex but not S-phase, or M-phase complexes; overexpression blocks cells in G1 phase and stabilizes the Cdc28p inhibitor Sic1p, while disruption accelerates the G1/S phase transition; phosphorylated during S phase in a Cdc28p-dependent manner; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and to the nucleus","termid":"PBO:0082893"}


id: FYPO:0000978
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing mevastatin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0002057","FYPO:0000257","FYPO:0002060","FYPO:0002058"],"is_obsolete":false,"name":"normal growth on mevastatin","synonyms":[{"name":"normal cell population growth on compactin","type":"exact"},{"name":"normal cell population growth on mevastatin","type":"exact"},{"name":"normal vegetative cell population growth on mevastatin","type":"exact"}],"termid":"FYPO:0000978"}


id: GO:0036354
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-deacetyl-3-(1-hydroxyethyl)bacteriochlorophyllide a + NAD+ = bacteriochlorophyllide a + NADH + H+.","definition_xrefs":["PMID:8437569","RHEA:19733"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"bacteriochlorophyllide-a dehydrogenase activity","secondary_identifiers":["MetaCyc:RXN-8787","EC:1.1.1.396"],"synonyms":[{"name":"2-desacetyl-2-hydroxyethyl bacteriochlorophyllide a dehydrogenase activity","type":"exact"}],"termid":"GO:0036354"}


id: PBO:0035768
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_transcriptional_repression_at_centromere_central_core","termid":"PBO:0035768"}


id: GO:0071897
data:
  {"annotated_genes":["SJAG_01677","SJAG_05979","SJAG_04266","SJAG_00153","SJAG_00573","SJAG_03855","SJAG_04190","SJAG_04586","SJAG_00939","SJAG_01378","SJAG_04877","SJAG_05239","SJAG_04791","SJAG_02667","SJAG_03685","SJAG_00406","SJAG_05197","SJAG_02527","SJAG_02199","SJAG_00814","SJAG_03906","SJAG_00611","SJAG_16460","SJAG_02658","SJAG_00198","SJAG_02194","SJAG_04089","SJAG_02818"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[60208,63804,63839,71241],"is_not":false,"summary":null,"term":"GO:0071897"},{"annotations":[80321],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000731"},{"annotations":[78623,97054,104650,110951],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904161"},{"annotations":[72185,101120,61619,58950,68155,104701],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070987"},{"annotations":[104702,97693,76694,72183,79418,79717,106047,74988],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042276"},{"annotations":[113614],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1904332"},{"annotations":[78795],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032210"},{"annotations":[81970,115685,92451,82033,72412,117808,109958,71378],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007004"},{"annotations":[100121],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019985"}]},"cv_name":"biological_process","definition":"The biosynthetic process resulting in the formation of DNA.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"},{"relation_name":"is_a","term_name":"nucleic acid biosynthetic process","termid":"GO:0141187"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00153":null,"SJAG_00198":null,"SJAG_00406":null,"SJAG_00573":null,"SJAG_00611":null,"SJAG_00814":null,"SJAG_00939":null,"SJAG_01378":null,"SJAG_01677":null,"SJAG_02194":null,"SJAG_02199":null,"SJAG_02527":null,"SJAG_02658":null,"SJAG_02667":null,"SJAG_02818":null,"SJAG_03685":null,"SJAG_03855":null,"SJAG_03906":null,"SJAG_04089":null,"SJAG_04190":null,"SJAG_04266":null,"SJAG_04586":null,"SJAG_04791":null,"SJAG_04877":null,"SJAG_05197":null,"SJAG_05239":null,"SJAG_05979":null,"SJAG_16460":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"DNA biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null},"synonyms":[{"name":"DNA anabolism","type":"exact"},{"name":"DNA biosynthesis","type":"exact"},{"name":"DNA formation","type":"exact"},{"name":"DNA synthesis","type":"exact"}],"termid":"GO:0071897","terms_by_termid":{"GO:0000731":null,"GO:0007004":null,"GO:0019985":null,"GO:0032210":null,"GO:0042276":null,"GO:0070987":null,"GO:0071897":null,"GO:1904161":null,"GO:1904332":null}}


id: PBO:0055495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2929","termid":"PBO:0055495"}


id: GO:0071907
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Determination of the asymmetric location of various parts of the digestive tract with respect to the left and right halves of the organism. The digestive tract is the anatomical structure through which food passes and is processed.","definition_xrefs":["GOC:cvs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"determination of left/right symmetry","termid":"GO:0007368"},{"relation_name":"part_of","term_name":"digestive tract development","termid":"GO:0048565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"determination of digestive tract left/right asymmetry","synonyms":[{"name":"determination of gut left/right asymmetry","type":"exact"},{"name":"determination of left/right asymmetry of the digestive tract","type":"exact"}],"termid":"GO:0071907"}


id: PBO:0066339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of chromosome condensation 2 pseudogene 1","termid":"PBO:0066339"}


id: PBO:0086867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative serine/threonine protein kinase; regulates spermine uptake; involved in polyamine transport; possible mitochondrial protein; PTK1 has a paralog, PTK2, that arose from the whole genome duplication","termid":"PBO:0086867"}


id: MOD:01393
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks two serine residues and a cysteine residue by formation of a pyridine-2,5-dicarboxylic acid.","definition_xrefs":["PubMed:10625477","PubMed:1880060","RESID:AA0470","PubMed:7844053"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridinyl ring crosslinked residues","termid":"MOD:01425"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"},{"relation_name":"is_a","term_name":"crosslinked L-serine residue","termid":"MOD:02055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-cysteine pyridine-2,5-dicarboxylic acid","synonyms":[{"name":"6-[(1R)-1-amino-2-sulfanylethyl]pyridine-2,5-dicarboxylic acid","type":"exact"},{"name":"L-cysteine pyridine-2,5-dicarboxylic acid","type":"exact"}],"termid":"MOD:01393"}


id: MONDO:1012495
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"symmetrical onychomadesis, non-human animal","termid":"MONDO:1011760"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"symmetrical onychomadesis, dog","secondary_identifiers":["OMIA:001989-9615"],"termid":"MONDO:1012495","xrefs":{"Monarch":{"xref_id":"1012495"}}}


id: PR:Q9P7S4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- taf4 gene.","definition_xrefs":["UniProtKB:Q9P7S4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription initiation factor TFIID subunit 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23G3.09","synonyms":[{"name":"Spom972h-taf4","type":"exact"},{"name":"TBP-associated factor 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7S4"}


id: GO:0006239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that generates dCMP, deoxycytidine monophosphate from derivatives of it, without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide salvage","termid":"GO:0010139"},{"relation_name":"is_a","term_name":"dCMP biosynthetic process","termid":"GO:0046064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"dCMP salvage","synonyms":[{"name":"deoxycytidine monophosphate salvage","type":"exact"}],"termid":"GO:0006239"}


id: PBO:0047092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 138 member D","termid":"PBO:0047092"}


id: PBO:0004589
data:
  {"annotation_feature_type":"gene","cv_name":"sequence_feature","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PIP box","termid":"PBO:0004589"}


id: GO:0048343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes committed to become a paraxial mesoderm cell.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesodermal cell fate commitment","termid":"GO:0001710"},{"relation_name":"part_of","term_name":"paraxial mesodermal cell differentiation","termid":"GO:0048342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"paraxial mesodermal cell fate commitment","termid":"GO:0048343"}


id: FYPO:0001722
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the export of sodium ions out of a cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal sodium export","termid":"FYPO:0001721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased sodium export","synonyms":[{"name":"decreased cellular sodium export","type":"exact"},{"name":"decreased sodium export during mitotic cell cycle","type":"related"},{"name":"decreased sodium export during vegetative growth","type":"exact"},{"name":"decreased sodium export from cell","type":"exact"},{"name":"decreased sodium ion export","type":"exact"},{"name":"reduced sodium export","type":"exact"}],"termid":"FYPO:0001722"}


id: MONDO:0005075
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A differentiated adenocarcinoma arising from the follicular cells of the thyroid gland. Radiation exposure is a risk factor and it is the most common malignant thyroid lesion, comprising 75% to 80% of all thyroid cancers in iodine sufficient countries. Diagnostic procedures include thyroid ultrasound and fine needle biopsy. Microscopically, the diagnosis is based on the distinct characteristics of the malignant cells, which include enlargement, oval shape, elongation, and overlapping of the nuclei. The nuclei also display clearing or have a ground glass appearance.","definition_xrefs":["NCIT:C4035"],"direct_ancestors":[{"relation_name":"is_a","term_name":"papillary adenocarcinoma","termid":"MONDO:0002512"},{"relation_name":"is_a","term_name":"differentiated thyroid carcinoma","termid":"MONDO:0015447"},{"relation_name":"is_a","term_name":"thyroid gland adenocarcinoma","termid":"MONDO:0024622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"thyroid gland papillary carcinoma","secondary_identifiers":["UMLS:C0238463","DOID:3969","EFO:0000641","MEDGEN:66773","SCTID:255029007","HP:0002895","ONCOTREE:THPA"],"synonyms":[{"name":"papillary cancer of the thyroid","type":"exact"},{"name":"papillary cancer of the thyroid gland","type":"exact"},{"name":"papillary cancer of thyroid","type":"exact"},{"name":"papillary cancer of thyroid gland","type":"exact"},{"name":"papillary carcinoma of the thyroid","type":"exact"},{"name":"papillary carcinoma of the thyroid gland","type":"exact"},{"name":"papillary carcinoma of thyroid","type":"exact"},{"name":"papillary carcinoma of thyroid gland","type":"exact"},{"name":"papillary thyroid cancer","type":"exact"},{"name":"papillary thyroid carcinoma","type":"exact"},{"name":"papillary thyroid gland carcinoma","type":"exact"},{"name":"thyroid gland papillary cancer","type":"exact"},{"name":"thyroid gland papillary carcinoma","type":"exact"},{"name":"thyroid papillary carcinoma","type":"exact"}],"termid":"MONDO:0005075","xrefs":{"Monarch":{"xref_id":"0005075"}}}


id: GO:0008001
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete fibrinogen (obsolete GO:0008001)","synonyms":[{"name":"fibrinogen","type":"exact"}],"termid":"GO:0008001"}


id: PBO:0047243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 236 member C","termid":"PBO:0047243"}


id: MONDO:0012758
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial prostate cancer in which the cause of the disease is a mutation in the MSMB gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostate cancer, hereditary","termid":"MONDO:0700275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"prostate cancer, hereditary, 13","secondary_identifiers":["MESH:C567456","UMLS:C2677821","OMIM:611928","GARD:15534","MEDGEN:383198"],"synonyms":[{"name":"HPC13","type":"related"},{"name":"MSMB familial prostate cancer","type":"exact"},{"name":"familial prostate cancer caused by mutation in MSMB","type":"exact"},{"name":"prostate cancer, hereditary, 13","type":"exact"},{"name":"prostate cancer, hereditary, type 13","type":"exact"}],"termid":"MONDO:0012758","xrefs":{"Monarch":{"xref_id":"0012758"}}}


id: GO:1900471
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of inositol biosynthetic process by stopping, preventing, or reducing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:TermGenie","PMID:8056324","GOC:dgf","PMID:8614637"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of inositol biosynthetic process by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:1900471)","synonyms":[{"name":"negative regulation of inositol anabolism by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of inositol biosynthesis by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of inositol formation by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of inositol synthesis by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of myo-inositol biosynthesis by negative regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"negative regulation of myo-inositol biosynthetic process by negative regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"negative regulation of vitamin Bh biosynthesis by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of vitamin Bh biosynthetic process by negative regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900471"}


id: PBO:0028068
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_crossover_junction_endodeoxyribonuclease_activity","termid":"PBO:0028068"}


id: GO:0102665
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: indole-3-acetate + L-glutamate + ATP = H+ + indole-3-acetyl-glutamate + AMP + diphosphoric acid.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete indole-3-acetyl-glutamate synthetase activity (obsolete GO:0102665)","termid":"GO:0102665"}


id: GO:1905372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ceramide phosphoethanolamine.","definition_xrefs":["GOC:hjd","GO_REF:0000068","PMID:25667419","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid catabolic process","termid":"GO:0009395"},{"relation_name":"is_a","term_name":"sphingolipid catabolic process","termid":"GO:0030149"},{"relation_name":"is_a","term_name":"ceramide phosphoethanolamine metabolic process","termid":"GO:1905371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"ceramide phosphoethanolamine catabolic process","synonyms":[{"name":"ceramide phosphoethanolamine breakdown","type":"exact"},{"name":"ceramide phosphoethanolamine catabolism","type":"exact"},{"name":"ceramide phosphoethanolamine degradation","type":"exact"}],"termid":"GO:1905372"}


id: PBO:0041577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 21 open reading frame 91","termid":"PBO:0041577"}


id: PBO:0002348
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.5.1.31","termid":"PBO:0002348"}


id: PR:Q09828
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A leucine--tRNA ligase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00303"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine--tRNA ligase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G8.09","secondary_identifiers":["UniProtKB:Q09828"],"synonyms":[{"name":"LeuRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-LARS2","type":"exact"},{"name":"leucyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09828"}


id: GO:0033001
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of an Fc-gamma RIII alpha chain and an Fc-epsilon RI gamma chain dimer with or without an Fc-epsilon RI beta chain and additional signaling components. The complex functions primarily as an activating receptor for IgG.","definition_xrefs":["PMID:11244038","PMID:12413532","GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fc receptor complex","termid":"GO:0032997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"Fc-gamma receptor III complex","synonyms":[{"name":"FcgRIII complex","type":"exact"},{"name":"IgG receptor complex","type":"broad"},{"name":"immunoglobulin G receptor complex","type":"broad"}],"termid":"GO:0033001"}


id: FYPO:0004922
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is inviable, contains one nucleus, has no septum, is elongated, and progression through the mitotic cell cycle is arrested at the mitotic G2/M phase transition.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated mononucleate aseptate cell","termid":"FYPO:0000839"},{"relation_name":"is_a","term_name":"inviable mononucleate aseptate cell with cell cycle arrest at mitotic G2/M phase transition","termid":"FYPO:0005367"},{"relation_name":"is_a","term_name":"inviable elongated mononucleate cell with cell cycle arrest at mitotic G2/M phase transition","termid":"FYPO:0007701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000005","FYPO:0000004","FYPO:0000631","FYPO:0000032","FYPO:0001320"],"is_obsolete":false,"name":"inviable elongated mononucleate aseptate cell with cell cycle arrest at mitotic G2/M phase transition","synonyms":[{"name":"elongated inviable mononucleate aseptate cell with mitotic cell cycle arrest at mitotic G2/M phase transition during vegetative growth","type":"exact"},{"name":"elongated inviable mononucleate aseptate vegetative cell with cell cycle arrest at mitotic G2/M phase transition","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell arrested at G2/M","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell with cell cycle arrest at mitotic G2/M phase transition","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell with cell cycle arrest at mitotic G2/M phase transition during mitotic cell cycle","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell with cell cycle arrest in mitotic G2 phase","type":"related"},{"name":"inviable elongated mononucleate aseptate vegetative cell with mitotic G2/M phase transition arrest","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell with mitotic cell cycle arrest at mitotic G2/M phase transition","type":"exact"},{"name":"lethal; elongated mononucleate aseptate vegetative cell with cell cycle arrest at mitotic G2/M phase transition","type":"exact"},{"name":"mitotic G2-phase arrested elongated inviable mononucleate aseptate vegetative cell","type":"related"},{"name":"mitotic cell cycle arrest in G2-phase with elongated inviable mononucleate aseptate cell","type":"related"}],"termid":"FYPO:0004922"}


id: GO:1904536
data:
  {"annotated_genes":["SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104193],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904537"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitotic telomere tethering at nuclear periphery.","definition_xrefs":["PMID:22959349","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of localization","termid":"GO:0032879"},{"relation_name":"regulates","term_name":"mitotic telomere tethering at nuclear periphery","termid":"GO:0044820"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mitotic telomere tethering at nuclear periphery","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1904536","terms_by_termid":{"GO:1904537":null}}


id: GO:0008766
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminoheptanedioate + D-alanyl-D-alanine = ADP + phosphate + UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysyl-D-alanyl-D-alanine.","definition_xrefs":["RHEA:28374"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity","secondary_identifiers":["MetaCyc:UDP-NACMURALGLDAPAALIG-RXN"],"termid":"GO:0008766"}


id: PBO:0086716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; non-essential gene","termid":"PBO:0086716"}


id: GO:0019304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of rhamnose, the hexose 6-deoxy-L-mannose, that occurs in the absence of oxygen.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhamnose catabolic process","termid":"GO:0019301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"anaerobic rhamnose catabolic process","synonyms":[{"name":"anaerobic rhamnose breakdown","type":"exact"},{"name":"anaerobic rhamnose catabolism","type":"exact"},{"name":"anaerobic rhamnose degradation","type":"exact"}],"termid":"GO:0019304"}


id: PBO:0035862
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_methylation_at_protein_coding_gene_during_vegetative_growth","termid":"PBO:0035862"}


id: GO:0071050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The enzymatic addition of a sequence of adenylyl residues at the 3' end of snoRNA class molecule (referred to as an sRNA in Archaea). In eukaryotes, this occurs in conjunction with termination of transcription of precursor snoRNA molecules and may occur post-transcriptionally on incorrectly processed molecules targeted for degradation.","definition_xrefs":["GOC:dgf","GOC:krc","PMID:18951092"],"gene_count":0,"genotype_count":0,"name":"obsolete sno(s)RNA polyadenylation (obsolete GO:0071050)","synonyms":[{"name":"sRNA polyadenylation","type":"narrow"},{"name":"snoRNA polyadenylation","type":"narrow"}],"termid":"GO:0071050"}


id: GO:1901763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of oxytetracycline.","definition_xrefs":["GOC:yaf","GOC:TermGenie","UniPathway:UPA00926","PMID:8163168"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide biosynthetic process","termid":"GO:0030639"},{"relation_name":"is_a","term_name":"oxytetracycline metabolic process","termid":"GO:1901761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"oxytetracycline biosynthetic process","synonyms":[{"name":"oxytetracycline anabolism","type":"exact"},{"name":"oxytetracycline biosynthesis","type":"exact"},{"name":"oxytetracycline formation","type":"exact"},{"name":"oxytetracycline synthesis","type":"exact"}],"termid":"GO:1901763"}


id: MOD:01346
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to an N4-hexosyl-L-asparagine.","definition_xrefs":["PubMed:15279557","PubMed:11567090","Unimod:41#N","PubMed:11112526","PubMed:6540775"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"hexosylated residue","termid":"MOD:00434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"N4-hexosylated asparagine","synonyms":[{"name":"Hex","type":"related"},{"name":"Hexose","type":"related"}],"termid":"MOD:01346"}


id: FYPO:0002290
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal during a cellular response to osmotic stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal protein phosphorylation during cellular response to osmotic stress","synonyms":[{"name":"normal protein phosphorylation during cellular response to osmotic stress during mitotic cell cycle","type":"related"},{"name":"normal protein phosphorylation during cellular response to osmotic stress during vegetative growth","type":"exact"}],"termid":"FYPO:0002290"}


id: MONDO:0000351
data:
  {"annotated_genes":["SJAG_03556","SJAG_01070"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87416],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100255"},{"annotations":[88715],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013404"}]},"cv_name":"mondo","definition":"An inherited metabolic disease that is has its basis in the disruption of methionine catabolic process.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of methionine cycle and sulfur amino acid metabolism","termid":"MONDO:0019222"},{"relation_name":"is_a","term_name":"inborn disorder of aspartate family metabolism","termid":"MONDO:0037938"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01070":null,"SJAG_03556":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"disorder of methionine catabolism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:43123004","HP:0003235","MEDGEN:887708","NANDO:2200475","UMLS:C4048705","DOID:0050544"],"synonyms":[{"name":"hypermethioninemia","type":"exact"},{"name":"inborn error of methionine catabolic process","type":"exact"},{"name":"inborn methionine catabolic process disorder","type":"exact"},{"name":"rare inborn error of methionine catabolic process","type":"exact"}],"termid":"MONDO:0000351","terms_by_termid":{"MONDO:0013404":null,"MONDO:0100255":null},"xrefs":{"Monarch":{"xref_id":"0000351"}}}


id: PBO:0027816
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cell_population_growth_on_uracil_nitrogen_source","termid":"PBO:0027816"}


id: PBO:0046909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 27 member D1","termid":"PBO:0046909"}


id: GO:0055026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cardiac muscle tissue development.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of striated muscle tissue development","termid":"GO:0045843"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle tissue development","termid":"GO:0055024"},{"relation_name":"negatively_regulates","term_name":"cardiac muscle tissue development","termid":"GO:0048738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiac muscle tissue development","synonyms":[{"name":"down regulation of cardiac muscle development","type":"exact"},{"name":"down-regulation of cardiac muscle development","type":"exact"},{"name":"downregulation of cardiac muscle development","type":"exact"},{"name":"inhibition of cardiac muscle development","type":"narrow"},{"name":"negative regulation of heart muscle development","type":"exact"}],"termid":"GO:0055026"}


id: PBO:0066446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"REV3L intronic transcript 1","termid":"PBO:0066446"}


id: GO:0086084
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein or protein complex that results in the connection of a Purkinje myocyte with an ventricular cardiac muscle cell and contributes to the communication between the two cells.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding involved in heterotypic cell-cell adhesion","termid":"GO:0086080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098631"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098631","GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"cell adhesive protein binding involved in Purkinje myocyte-ventricular cardiac muscle cell communication","termid":"GO:0086084"}


id: PBO:0052542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kallikrein related peptidase 15","termid":"PBO:0052542"}


id: GO:0032444
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transcriptionally active complex that binds to an activin response element (ARE) in the promoter of target genes, and is composed of two SMAD2 proteins, one SMAD4 protein and a Forkhead activin signal transducer (FAST) transcription factor.","definition_xrefs":["PMID:9288972","PMID:12374795"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"activin responsive factor complex","synonyms":[{"name":"ARF complex","type":"exact"}],"termid":"GO:0032444"}


id: PBO:0001269
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"name derived from human ortholog MZT1","termid":"PBO:0001269"}


id: PBO:0039758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amyloid beta precursor protein binding protein 2","termid":"PBO:0039758"}


id: PBO:0007319
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific Copper Activator","termid":"PBO:0007319"}


id: PBO:0062641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily K member 2 pseudogene","termid":"PBO:0062641"}


id: GO:0033969
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-(L-gamma-glutamylamino)butanoate + H2O = 4-aminobutanoate + L-glutamate.","definition_xrefs":["EC:3.5.1.94","RHEA:19737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"gamma-glutamyl-gamma-aminobutyrate hydrolase activity","secondary_identifiers":["MetaCyc:RXN0-3942","KEGG_REACTION:R07419"],"synonyms":[{"name":"4-(glutamylamino)butanoate amidohydrolase activity","type":"related"},{"name":"PuuD","type":"related"},{"name":"YcjL","type":"related"},{"name":"gamma-glutamyl-GABA hydrolase activity","type":"related"}],"termid":"GO:0033969"}


id: PBO:0088157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vesicle membrane receptor protein (v-SNARE); involved in the fusion between Golgi-derived secretory vesicles with the plasma membrane; Snc2p levels regulated by Vps45p; member of the synaptobrevin/VAMP family of R-type v-SNARE proteins; SNC2 has a paralog, SNC1, that arose from the whole genome duplication","termid":"PBO:0088157"}


id: GO:0034553
data:
  {"annotated_genes":["SJAG_01895","SJAG_03574","SJAG_07005","SJAG_00703"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[68592,72480,101064,109328],"is_not":false,"summary":null,"term":"GO:0034553"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form respiratory chain complex II, in the mitochondrial inner membrane.","definition_xrefs":["GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial respiratory chain complex assembly","termid":"GO:0033108"},{"relation_name":"is_a","term_name":"respiratory chain complex II assembly","termid":"GO:0034552"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00703":null,"SJAG_01895":null,"SJAG_03574":null,"SJAG_07005":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0007005","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"mitochondrial respiratory chain complex II assembly","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0034553","terms_by_termid":{"GO:0034553":null}}


id: PomGeneEx:0000018
data:
  {"annotation_feature_type":"gene","cv_name":"PomGeneExProt","definition":"A gene expression qualifier that indicates that a protein is present at a higher level under one set of conditions or at one indicated time than otherwise.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased","termid":"PomGeneEx:0000002"},{"relation_name":"is_a","term_name":"protein expression level","termid":"PomGeneEx:0000010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein level increased","synonyms":[{"name":"increased protein level","type":"exact"},{"name":"protein expression increased","type":"exact"}],"termid":"PomGeneEx:0000018"}


id: GO:0007004
data:
  {"annotated_genes":["SJAG_04266","SJAG_05979","SJAG_03855","SJAG_02194","SJAG_00939","SJAG_03685","SJAG_01378","SJAG_01677","SJAG_04586"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71378,72412,81970,82033,92451,109958,115685,117808],"is_not":false,"summary":null,"term":"GO:0007004"},{"annotations":[78795],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032210"}]},"cv_name":"biological_process","definition":"The maintenance of proper telomeric length by the addition of telomeric repeats by telomerase.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA-templated DNA biosynthetic process","termid":"GO:0006278"},{"relation_name":"is_a","term_name":"telomere maintenance via telomere lengthening","termid":"GO:0010833"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00939":null,"SJAG_01378":null,"SJAG_01677":null,"SJAG_02194":null,"SJAG_03685":null,"SJAG_03855":null,"SJAG_04266":null,"SJAG_04586":null,"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0032200"}],"interesting_parent_ids":["GO:0032200","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"telomere maintenance via telomerase","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-171319"],"synonyms":[{"name":"telomerase-dependent telomere maintenance","type":"exact"}],"termid":"GO:0007004","terms_by_termid":{"GO:0007004":null,"GO:0032210":null}}


id: PBO:0087492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of DNA polymerase delta (polymerase III); essential for cell viability; involved in DNA replication and DNA repair; forms a complex with Rev3p, Rev7p and Pol32p; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0087492"}


id: PBO:0003646
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDG-Ii","termid":"PBO:0003646"}


id: MONDO:0016522
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by the association of conotruncal heart defects, myelomeningocele and craniofacial dysmorphism similar to that seen in monosomy 22q11.","definition_xrefs":["Orphanet:2351"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kousseff syndrome","secondary_identifiers":["GARD:4752","MESH:C537223","UMLS:C2931444","MEDGEN:444057","SCTID:726083008"],"synonyms":[{"name":"sacral meningocele conotruncal heart defects","type":"related"},{"name":"sacral meningocele, conotruncal heart defects, and minor anomalies of head and neck","type":"related"},{"name":"sacral meningocele-conotruncal heart defects syndrome","type":"exact"}],"termid":"MONDO:0016522","xrefs":{"Monarch":{"xref_id":"0016522"}}}


id: GO:0001051
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a single subunit plastid RNA polymerase enzyme, which is composed of a single catalytic subunit similar to the RNA polymerase enzymes from phages T3, T7, and SP6.","definition_xrefs":["GOC:txnOH","PMID:20701995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single-subunit type RNA polymerase binding","termid":"GO:0001050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"plastid single-subunit type RNA polymerase binding","termid":"GO:0001051"}


id: PBO:0002913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type ATPase V1 subunit E (predicted)","termid":"PBO:0002913"}


id: GO:0045654
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of megakaryocyte differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of myeloid cell differentiation","termid":"GO:0045639"},{"relation_name":"is_a","term_name":"regulation of megakaryocyte differentiation","termid":"GO:0045652"},{"relation_name":"positively_regulates","term_name":"megakaryocyte differentiation","termid":"GO:0030219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of megakaryocyte differentiation","synonyms":[{"name":"activation of megakaryocyte differentiation","type":"narrow"},{"name":"stimulation of megakaryocyte differentiation","type":"narrow"},{"name":"up regulation of megakaryocyte differentiation","type":"exact"},{"name":"up-regulation of megakaryocyte differentiation","type":"exact"},{"name":"upregulation of megakaryocyte differentiation","type":"exact"}],"termid":"GO:0045654"}


id: GO:0019429
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of fluorene, a tricyclic polycyclic aromatic hydrocarbon containing a five-membered ring. It is a major component of fossil fuels and their derivatives and is also a by-product of coal-conversion and energy-related industries. It is commonly found in vehicle exhaust emissions, crude oils, motor oils, coal and oil combustion products, waste incineration, and industrial effluents.","definition_xrefs":["PMID:15317800"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"},{"relation_name":"is_a","term_name":"hydrocarbon catabolic process","termid":"GO:0120253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fluorene catabolic process","secondary_identifiers":["MetaCyc:FLUORENE-DEG-9-ONE-PWY","UM-BBD_pathwayID:flu","GO:0018917"],"synonyms":[{"name":"fluorene breakdown","type":"exact"},{"name":"fluorene catabolism","type":"exact"},{"name":"fluorene degradation","type":"exact"},{"name":"fluorene metabolic process","type":"narrow"},{"name":"fluorene metabolism","type":"exact"}],"termid":"GO:0019429"}


id: PBO:0088466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hsp40 family DNAJ domain protein Mas5","termid":"PBO:0088466"}


id: PBO:0109512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1342, pseudogene","termid":"PBO:0109512"}


id: PBO:0060490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nanos C2HC-type zinc finger 1","termid":"PBO:0060490"}


id: GO:0016635
data:
  {"annotated_genes":["SJAG_00260","SJAG_01671","SJAG_00197"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57332],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106430"},{"annotations":[67769,77748],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008177"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a quinone or related compound.","definition_xrefs":["EC:1.3.5.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00197":null,"SJAG_00260":null,"SJAG_01671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null},"termid":"GO:0016635","terms_by_termid":{"GO:0008177":null,"GO:0106430":null}}


id: PR:O74333
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fhn1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-classical export protein 2 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1685.13","synonyms":[{"name":"Spom972h-fhn1","type":"exact"}],"termid":"PR:O74333"}


id: PBO:0087440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit g of the mitochondrial F1F0 ATP synthase; reversibly phosphorylated on two residues; unphosphorylated form is required for dimerization of the ATP synthase complex, which in turn determines oligomerization of the complex and the shape of inner membrane cristae","termid":"PBO:0087440"}


id: GO:1902859
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of propionyl-CoA.","definition_xrefs":["PMID:15514053","GO_REF:0000068","GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty-acyl-CoA catabolic process","termid":"GO:0036115"},{"relation_name":"is_a","term_name":"propionyl-CoA metabolic process","termid":"GO:1902858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629","GO:0055086","GO:0006790"],"is_obsolete":false,"name":"propionyl-CoA catabolic process","synonyms":[{"name":"propionyl-CoA breakdown","type":"exact"},{"name":"propionyl-CoA catabolism","type":"exact"},{"name":"propionyl-CoA degradation","type":"exact"}],"termid":"GO:1902859"}


id: GO:0030825
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving cGMP.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cGMP metabolic process (obsolete GO:0030825)","synonyms":[{"name":"activation of cGMP metabolic process","type":"narrow"},{"name":"positive regulation of cGMP metabolism","type":"exact"},{"name":"stimulation of cGMP metabolic process","type":"narrow"},{"name":"up regulation of cGMP metabolic process","type":"exact"},{"name":"up-regulation of cGMP metabolic process","type":"exact"},{"name":"upregulation of cGMP metabolic process","type":"exact"}],"termid":"GO:0030825"}


id: GO:0043760
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetyl-L-2,6-diaminoheptanedioate + 2-oxoglutarate = N-acetyl-2-L-amino-6-oxoheptanedioate + L-glutamate.","definition_xrefs":["PMID:1906065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016769","GO:0003824"],"is_obsolete":false,"name":"acetyldiaminopimelate aminotransferase activity","synonyms":[{"name":"N-acetyl-L,L-diaminopimelate aminotransferase activity","type":"exact"},{"name":"N-acetyl-diaminopimelate aminotransferase activity","type":"exact"}],"termid":"GO:0043760"}


id: GO:2000407
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of T cell extravasation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular extravasation","termid":"GO:0002691"},{"relation_name":"is_a","term_name":"regulation of T cell migration","termid":"GO:2000404"},{"relation_name":"regulates","term_name":"T cell extravasation","termid":"GO:0072683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T cell extravasation","synonyms":[{"name":"regulation of T lymphocyte extravasation","type":"exact"},{"name":"regulation of T-cell extravasation","type":"exact"},{"name":"regulation of T-lymphocyte extravasation","type":"exact"}],"termid":"GO:2000407"}


id: PBO:0076380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tachykinin precursor 1","termid":"PBO:0076380"}


id: GO:0061603
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction GTP + molybdenum cofactor = diphosphate + guanylyl molybdenum cofactor.","definition_xrefs":["GOC:dph","EC:2.7.7.77"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanylyltransferase activity","termid":"GO:0070568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016779","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"molybdenum cofactor guanylyltransferase activity","secondary_identifiers":["RHEA:34243"],"termid":"GO:0061603"}


id: PBO:0042623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caudal type homeobox 4","termid":"PBO:0042623"}


id: SO:0001068
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polypeptide_repeat is a single copy of an internal sequence repetition.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_conserved_region","termid":"SO:0100021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_repeat","secondary_identifiers":["BS:00070"],"synonyms":[{"name":"polypeptide repeat","type":"exact"},{"name":"repeat","type":"related"}],"termid":"SO:0001068"}


id: GO:0047669
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sucrose + 1,4-alpha-D-glucosyl(n) = D-fructose + 1,4-alpha-D-glucosyl(n+1).","definition_xrefs":["EC:2.4.1.4","MetaCyc:AMYLOSUCRASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"amylosucrase activity","secondary_identifiers":["RHEA:24572"],"synonyms":[{"name":"sucrose-1,4-alpha-glucan glucosyltransferase activity","type":"related"},{"name":"sucrose-glucan glucosyltransferase activity","type":"related"},{"name":"sucrose:1,4-alpha-D-glucan 4-alpha-D-glucosyltransferase activity","type":"related"}],"termid":"GO:0047669"}


id: PBO:0049457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogenin 1 pseudogene 2","termid":"PBO:0049457"}


id: GO:0022831
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transport of a solute across a membrane via a narrow pore channel that opens in response to a particular stimulus.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"narrow pore channel activity","termid":"GO:0022842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"narrow pore, gated channel activity","secondary_identifiers":["Wikipedia:Ion_channels"],"synonyms":[{"name":"ion channels","type":"related"}],"termid":"GO:0022831"}


id: PBO:0068254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 45S pre-ribosomal 1","termid":"PBO:0068254"}


id: MONDO:0024636
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory disease involving a pathogenic inflammatory response in the heart layer.","definition_xrefs":["MONDO:patterns/inflammatory_disease_by_site"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart disorder","termid":"MONDO:0005267"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"inflammation of heart layer","secondary_identifiers":["UMLS:C0869523","MEDGEN:163689","ICD9:429.89","SCTID:399617002"],"synonyms":[{"name":"carditis","type":"exact"},{"name":"heart layer inflammation","type":"exact"}],"termid":"MONDO:0024636","xrefs":{"Monarch":{"xref_id":"0024636"}}}


id: PBO:0070652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 23","termid":"PBO:0070652"}


id: MONDO:0006731
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An uncomfortable feeling of inner restlessness and inability to stay still. It can be a side effect of psychotropic medications.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"drug-induced akathisia","secondary_identifiers":["MESH:D017109","ICD10CM:G25.71","ICD9:333.99","MedDRA:10001540","MEDGEN:57937","SCTID:230333002","UMLS:C0162550"],"termid":"MONDO:0006731","xrefs":{"Monarch":{"xref_id":"0006731"}}}


id: PBO:0011523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-lysine N-methyltransferase Rrg1 (predicted)","termid":"PBO:0011523"}


id: PBO:0067770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 70","termid":"PBO:0067770"}


id: GO:0075296
data:
  {"annotated_genes":["SJAG_02169","SJAG_04853"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104110],"is_not":false,"summary":null,"term":"GO:0075296"},{"annotations":[92540],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903024"}]},"cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of ascospore formation, a process in which a sexual spore, named ascospore, from Ascomycete fungi was produced inside an ascus.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell development","termid":"GO:0010720"},{"relation_name":"is_a","term_name":"regulation of ascospore formation","termid":"GO:0034307"},{"relation_name":"is_a","term_name":"positive regulation of sexual sporulation resulting in formation of a cellular spore","termid":"GO:0043941"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"positively_regulates","term_name":"ascospore formation","termid":"GO:0030437"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02169":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0030437"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0030437"}],"interesting_parent_ids":["GO:0007049","GO:0030437","GO:0008150"],"is_obsolete":false,"name":"positive regulation of ascospore formation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0075296","terms_by_termid":{"GO:0075296":null,"GO:1903024":null}}


id: PBO:0060165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-RNR2 like 13 (pseudogene)","termid":"PBO:0060165"}


id: PBO:0001224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-arabinono-1,4-lactone oxidase (predicted)","termid":"PBO:0001224"}


id: MONDO:0005352
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder diagnosed in childhood or adolescence age group characterized by aggressive behavior, deceitfulness, destruction of property or violation of rules that is persistent and repetitive, and within a one year period.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specific developmental disorder","termid":"MONDO:0000592"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conduct disorder","secondary_identifiers":["ICD9:312.89","MEDGEN:56196","MESH:D019955","UMLS:C0149654","NCIT:C89329","DOID:12995","ICD9:312.9","SCTID:430909002","EFO:0004216"],"termid":"MONDO:0005352","xrefs":{"Monarch":{"xref_id":"0005352"}}}


id: SO:0002378
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that codes for U3_snoRNA. U3 snoRNA is a member of the box C/D class of small nucleolar RNAs. The U3 snoRNA secondary structure is characterised by a small 5' domain (with boxes A and A'), and a larger 3' domain (with boxes B, C, C', and D), the two domains being linked by a single-stranded hinge. Boxes B and C form the B/C motif, which appears to be exclusive to U3 snoRNAs, and boxes C' and D form the C'/D motif. The latter is functionally similar to the C/D motifs found in other snoRNAs. The 5' domain and the hinge region act as a pre-rRNA-binding domain. The 3' domain has conserved protein-binding sites. Both the box B/C and box C'/D motifs are sufficient for nuclear retention of U3 snoRNA. The box C'/D motif is also necessary for nucleolar localization, stability and hypermethylation of U3 snoRNA. Both box B/C and C'/D motifs are involved in specific protein interactions and are necessary for the rRNA processing functions of U3 snoRNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"C_D_box_snoRNA_gene","termid":"SO:0002375"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3_snoRNA_gene","synonyms":[{"name":"small nucleolar RNA U3 gene, snoRNA U3 gene, U3 small nucleolar RNA gene, U3 snoRNA gene","type":"exact"}],"termid":"SO:0002378"}


id: PBO:0003741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-like protein Klp5","termid":"PBO:0003741"}


id: PBO:0089159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L13","termid":"PBO:0089159"}


id: GO:1903292
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a Golgi membrane.","definition_xrefs":["GOC:TermGenie","PMID:11378902","GO_REF:0000087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to Golgi apparatus","termid":"GO:0034067"},{"relation_name":"is_a","term_name":"protein localization to membrane","termid":"GO:0072657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to Golgi membrane","synonyms":[{"name":"protein localisation in Golgi membrane","type":"exact"},{"name":"protein localisation to Golgi membrane","type":"exact"},{"name":"protein localization in Golgi membrane","type":"exact"}],"termid":"GO:1903292"}


id: PBO:0109194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitofissin Atg44","termid":"PBO:0109194"}


id: GO:0000959
data:
  {"annotated_genes":["SJAG_02977","SJAG_00255","SJAG_04885","SJAG_01948","SJAG_01704","SJAG_03289","SJAG_03014","SJAG_00186","SJAG_00634","SJAG_00865","SJAG_00358","SJAG_02302","SJAG_02526","SJAG_00997","SJAG_00797","SJAG_00077","SJAG_02991","SJAG_03104","SJAG_02288","SJAG_06586","SJAG_02383","SJAG_03332","SJAG_04377","SJAG_04700","SJAG_04367"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116292,100770],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0090616"},{"annotations":[115743],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000958"},{"annotations":[98072,91774,105754],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0090615"},{"annotations":[111743],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140040"},{"annotations":[92194,92595],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000957"},{"annotations":[103174,105429],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000963"},{"annotations":[89550,71807,119787,82146],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:1990180"},{"annotations":[79841],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0070901"},{"annotations":[120499,77216],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0072670"},{"annotations":[108716,96076],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:1990799"},{"annotations":[94610,77965],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0070899"},{"annotations":[89225,96956,99991],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0006391"},{"annotations":[96480],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070127"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving RNA transcribed from the mitochondrial genome and occurring in the mitochondrion.","definition_xrefs":["GOC:mah","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA metabolic process","termid":"GO:0016070"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00077":null,"SJAG_00186":null,"SJAG_00255":null,"SJAG_00358":null,"SJAG_00634":null,"SJAG_00797":null,"SJAG_00865":null,"SJAG_00997":null,"SJAG_01704":null,"SJAG_01948":null,"SJAG_02288":null,"SJAG_02302":null,"SJAG_02383":null,"SJAG_02526":null,"SJAG_02977":null,"SJAG_02991":null,"SJAG_03014":null,"SJAG_03104":null,"SJAG_03289":null,"SJAG_03332":null,"SJAG_04367":null,"SJAG_04377":null,"SJAG_04700":null,"SJAG_04885":null,"SJAG_06586":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mitochondrial RNA metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0000959","terms_by_termid":{"GO:0000957":null,"GO:0000958":null,"GO:0000963":null,"GO:0006391":null,"GO:0070127":null,"GO:0070899":null,"GO:0070901":null,"GO:0072670":null,"GO:0090615":null,"GO:0090616":null,"GO:0140040":null,"GO:1990180":null,"GO:1990799":null}}


id: GO:1901773
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lincomycin.","definition_xrefs":["GOC:TermGenie","GOC:yaf","PMID:8577249"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-glycoside catabolic process","termid":"GO:0016145"},{"relation_name":"is_a","term_name":"modified amino acid catabolic process","termid":"GO:0042219"},{"relation_name":"is_a","term_name":"lincomycin metabolic process","termid":"GO:1901772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"lincomycin catabolic process","synonyms":[{"name":"lincomycin breakdown","type":"exact"},{"name":"lincomycin catabolism","type":"exact"},{"name":"lincomycin degradation","type":"exact"}],"termid":"GO:1901773"}


id: SO:0001648
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transposon that is disrupted by the insertion of another element.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transposable_element","termid":"SO:0000101"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nested_transposon","synonyms":[{"name":"nested transposon","type":"exact"}],"termid":"SO:0001648"}


id: PBO:0060752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B3 pseudogene 2","termid":"PBO:0060752"}


id: GO:0019182
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the energy-independent facilitated diffusion of a chloride ion through a transmembrane channel that opens when bound to histamine.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chloride channel activity","termid":"GO:0005254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"histamine-gated chloride channel activity","termid":"GO:0019182"}


id: PBO:0058724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6852","termid":"PBO:0058724"}


id: PBO:0063036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"p21 (RAC1) activated kinase 3","termid":"PBO:0063036"}


id: GO:0009060
data:
  {"annotated_genes":["SJAG_02564","SJAG_00866","SJAG_00461","SJAG_00976","SJAG_07003","SJAG_02158","SJAG_06622","SJAG_02504","SJAG_03163","SJAG_04048","SJAG_01922","SJAG_06382","SJAG_04843","SJAG_05204","SJAG_03920","SJAG_01763","SJAG_00260","SJAG_03290","SJAG_02744","SJAG_MIT15","SJAG_01077","SJAG_02592","SJAG_01062","SJAG_01895","SJAG_03925","SJAG_00755","SJAG_MIT37","SJAG_00080","SJAG_00915","SJAG_01753","SJAG_06621","SJAG_01630","SJAG_01402","SJAG_03828","SJAG_02598","SJAG_00542","SJAG_04152","SJAG_01490","SJAG_01671","SJAG_01310","SJAG_00438","SJAG_03588","SJAG_00133","SJAG_00836","SJAG_03114","SJAG_04495","SJAG_00601","SJAG_02945","SJAG_MIT04","SJAG_03373","SJAG_02433","SJAG_04122","SJAG_MIT03","SJAG_04192","SJAG_00605","SJAG_02796","SJAG_05629","SJAG_07006","SJAG_MIT20","SJAG_00698","SJAG_01524","SJAG_02398","SJAG_00027","SJAG_00839","SJAG_03903","SJAG_02464","SJAG_03813","SJAG_02009","SJAG_02105","SJAG_03064","SJAG_02107","SJAG_02006","SJAG_02135","SJAG_MIT13","SJAG_MIT09","SJAG_00985","SJAG_01355","SJAG_01190","SJAG_03490","SJAG_02646","SJAG_02369","SJAG_07007","SJAG_04334","SJAG_03660"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61728,63493,89233,96821,100843,110432],"is_not":false,"summary":null,"term":"GO:0009060"},{"annotations":[107282,100079,111237,111239,74174,107284,111242,99808,111238,79584,105204,111240,105461,107653,107283,107652,118210,96339,111243,111241],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061621"},{"annotations":[90422],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061613"},{"annotations":[75992,116089,80627,120964,73580,110126,62548,78190,117321,120934,120912],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0006123"},{"annotations":[114715],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0006120"},{"annotations":[115054,91000,118618,90629],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0006121"},{"annotations":[78189,62514,115260,119550,77425,77507,105898,120939,73917,75503],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0006122"},{"annotations":[95682,109647,103638,106843,120945,120957,95093,90944,94667,120951,110631,96662,105473,109739,117707,105499,104859],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0042776"},{"annotations":[113734,99440,96188,111538],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903715"},{"annotations":[81033,75845,76152,77572,74894,108571,71970,73499,77074,67771,78555,63517,62198,72482,65477],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006099"}]},"cv_name":"biological_process","definition":"The 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id: PBO:0113972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fungal protein, conserved in ascomycetes","termid":"PBO:0113972"}


id: PBO:0050173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 29","termid":"PBO:0050173"}


id: PBO:0075953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STAM divergent transcript","termid":"PBO:0075953"}


id: PBO:0042497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin 17","termid":"PBO:0042497"}


id: PBO:0078235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 17 (non-functional)","termid":"PBO:0078235"}


id: GO:0050639
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 10-desacetyltaxuyunnanin C + acetyl-CoA = CoA + taxuyunnanin C.","definition_xrefs":["RHEA:18837","EC:2.3.1.163"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"10-hydroxytaxane O-acetyltransferase activity","secondary_identifiers":["KEGG_REACTION:R07252","MetaCyc:2.3.1.163-RXN"],"synonyms":[{"name":"acetyl coenzyme A: 10-hydroxytaxane O-acetyltransferase activity","type":"related"},{"name":"acetyl coenzyme A:10-hydroxytaxane O-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:taxan-10beta-ol O-acetyltransferase","type":"broad"}],"termid":"GO:0050639"}


id: PBO:0087660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Iml1p/SEACIT complex; SEACIT (Iml1p-Npr2p-Npr3p) is a subcomplex of SEAC, a coatomer-related complex that associates dynamically with the vacuole; Npr3p may have a structural or regulatory role, supporting Iml1p function as a GAP for the Rag family GTPase Gtr1p, and leading to inhibition of TORC1 signaling in response to amino acid deprivation; SEACIT is required for non-nitrogen-starvation-induced autophagy; null mutant has meiotic defects; human NPRL3 homolog","termid":"PBO:0087660"}


id: FYPO:0007048
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of alkaline phosphatase activity is normal (i.e. indistinguishable from wild type) during a cellular stress response to zinc ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal alkaline phosphatase activity","termid":"FYPO:0007047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal alkaline phosphatase activity during stress response to zinc ion","synonyms":[{"name":"normal alkaline phosphatase activity during cellular response to excess zinc","type":"exact"},{"name":"normal alkaline phosphatase activity during cellular response to high zinc level","type":"exact"},{"name":"normal alkaline phosphatase activity during cellular response to replete zinc","type":"related"},{"name":"normal alkaline phosphatase activity during cellular stress response to zinc ion","type":"exact"},{"name":"normal alkaline phosphatase activity during response to zinc ion stress","type":"exact"},{"name":"normal alkaline phosphatase activity during response to zinc toxicity","type":"related"},{"name":"normal alkaline phosphatase activity during stress response to zinc","type":"broad"}],"termid":"FYPO:0007048"}


id: PBO:0056457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARVEL domain containing 3","termid":"PBO:0056457"}


id: PBO:0062591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily J member 1","termid":"PBO:0062591"}


id: RO:0002574
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"biotically_interacts_with","termid":"RO:0002437"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"participates_in_a_biotic-biotic_interaction_with","termid":"RO:0002574"}


id: GO:0052466
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism activates, maintains or increases the frequency, rate or extent of the resistance gene-dependent defense response of the symbiont. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of symbiont resistance gene-dependent defense response (obsolete GO:0052466)","synonyms":[{"name":"modulation by organism of defense response in symbiont by specific elicitors","type":"exact"},{"name":"modulation by organism of pathogen-race/symbiont plant cultivar-specific resistance in symbiont","type":"exact"},{"name":"modulation by organism of symbiont gene-for-gene resistance","type":"exact"},{"name":"modulation by organism of symbiont resistance gene-dependent defense response","type":"exact"}],"termid":"GO:0052466"}


id: PBO:0004314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystathionine gamma-synthase (predicted)","termid":"PBO:0004314"}


id: GO:0035792
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A postsynaptic membrane that is part of a host cell. A postsynaptic membrane is a specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters transmit the signal across the synaptic cleft to the postsynaptic membrane.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell part","termid":"GO:0033643"},{"relation_name":"part_of","term_name":"host cell membrane","termid":"GO:0033644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell postsynaptic membrane","synonyms":[{"name":"other organism post-synaptic membrane","type":"exact"},{"name":"other organism postsynaptic membrane","type":"related"}],"termid":"GO:0035792"}


id: PBO:0110394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEFH pseudogene 2","termid":"PBO:0110394"}


id: PBO:0029437
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_single_cell_division,_with_elongated,_curved_germ_tube","termid":"PBO:0029437"}


id: GO:0004857
data:
  {"annotated_genes":["SJAG_04999","SJAG_01072","SJAG_03931","SJAG_04699","SJAG_00460","SJAG_03974","SJAG_03629","SJAG_04546","SJAG_04627","SJAG_04505","SJAG_04633","SJAG_04203","SJAG_02380","SJAG_03309","SJAG_01245","SJAG_01821","SJAG_02594","SJAG_01150","SJAG_01118","SJAG_01210","SJAG_03272","SJAG_02874","SJAG_00452","SJAG_02786","SJAG_01348","SJAG_02194","SJAG_01515","SJAG_02485"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111087,118856],"is_not":false,"summary":null,"term":"GO:0004857"},{"annotations":[72716],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004862"},{"annotations":[110740],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004861"},{"annotations":[67738,63820,105103],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004866"},{"annotations":[90648],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060698"},{"annotations":[118167],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005095"},{"annotations":[94014,99041],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990624"},{"annotations":[67069],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008073"},{"annotations":[101791],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030414"},{"annotations":[108849,77656],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004860"},{"annotations":[72037,91195],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004864"},{"annotations":[119909,110250],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030291"},{"annotations":[77793,89669,76348],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004865"},{"annotations":[97308,98895],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990846"},{"annotations":[78792],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010521"},{"annotations":[117424,100508],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990948"},{"annotations":[116490],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0055105"}]},"cv_name":"molecular_function","definition":"A molecular function regulator that reduces a catalytic activity.","definition_xrefs":["GOC:ebc","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme regulator activity","termid":"GO:0030234"},{"relation_name":"is_a","term_name":"molecular function inhibitor activity","termid":"GO:0140678"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00452":null,"SJAG_00460":null,"SJAG_01072":null,"SJAG_01118":null,"SJAG_01150":null,"SJAG_01210":null,"SJAG_01245":null,"SJAG_01348":null,"SJAG_01515":null,"SJAG_01821":null,"SJAG_02194":null,"SJAG_02380":null,"SJAG_02485":null,"SJAG_02594":null,"SJAG_02786":null,"SJAG_02874":null,"SJAG_03272":null,"SJAG_03309":null,"SJAG_03629":null,"SJAG_03931":null,"SJAG_03974":null,"SJAG_04203":null,"SJAG_04505":null,"SJAG_04546":null,"SJAG_04627":null,"SJAG_04633":null,"SJAG_04699":null,"SJAG_04999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0003674","GO:0140678","GO:0030234","GO:0098772"],"is_obsolete":false,"name":"enzyme inhibitor activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0048551"],"synonyms":[{"name":"metalloenzyme inhibitor activity","type":"narrow"}],"termid":"GO:0004857","terms_by_termid":{"GO:0004857":null,"GO:0004860":null,"GO:0004861":null,"GO:0004862":null,"GO:0004864":null,"GO:0004865":null,"GO:0004866":null,"GO:0005095":null,"GO:0008073":null,"GO:0010521":null,"GO:0030291":null,"GO:0030414":null,"GO:0055105":null,"GO:0060698":null,"GO:1990624":null,"GO:1990846":null,"GO:1990948":null}}


id: GO:0070365
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a hepatocyte. A hepatocyte is specialized epithelial cell that is organized into interconnected plates called lobules, and is the main structural component of the liver.","definition_xrefs":["PMID:7588884","CL:0000182"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation","termid":"GO:0030855"},{"relation_name":"part_of","term_name":"liver development","termid":"GO:0001889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hepatocyte differentiation","synonyms":[{"name":"liver cell differentiation","type":"exact"}],"termid":"GO:0070365"}


id: GO:0044550
data:
  {"annotated_genes":["SJAG_00792","SJAG_04031","SJAG_00469","SJAG_04032"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95923,107225,59631],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031169"},{"annotations":[95869],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905569"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of secondary metabolites, the compounds that are not necessarily required for growth and maintenance of cells, and are often unique to a taxon.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00469":null,"SJAG_00792":null,"SJAG_04031":null,"SJAG_04032":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"secondary metabolite biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"secondary metabolite biosynthesis","type":"exact"}],"termid":"GO:0044550","terms_by_termid":{"GO:0031169":null,"GO:1905569":null}}


id: GO:0044510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant positive regulation of signal transduction in the bitten organism.","definition_xrefs":["GOC:jl","GOC:fj"],"gene_count":0,"genotype_count":0,"name":"obsolete venom-mediated activation of signal transduction in another organism (obsolete GO:0044510)","synonyms":[{"name":"envenomation resulting in positive regulation of signal transduction in another organism","type":"exact"},{"name":"envenomation resulting in positive regulation of signal transduction in other organism","type":"exact"}],"termid":"GO:0044510"}


id: SO:0001817
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a sequence that contains a mutation involving the deletion or insertion of one or more bases, where this number is divisible by 3.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA_attribute","termid":"SO:0000863"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inframe","termid":"SO:0001817"}


id: PBO:0046014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2 alpha kinase 1","termid":"PBO:0046014"}


id: PR:000044575
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the rad9 gene Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein rad9 (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC664.07c","synonyms":[{"name":"SPAC664.07c","type":"related"},{"name":"Spom-rad9","type":"exact"}],"termid":"PR:000044575"}


id: PBO:0004567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-oxoacyl-[acyl-carrier-protein]-synthase condensing enzyme (predicted)","termid":"PBO:0004567"}


id: PBO:0052614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KRBOX5 pseudogene 1","termid":"PBO:0052614"}


id: MONDO:1011455
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Arthrogryposis multiplex congenita that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental defect during embryogenesis, non-human animal","termid":"MONDO:1011310"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arthrogryposis multiplex congenita, non-human animal","secondary_identifiers":["OMIA:001465"],"termid":"MONDO:1011455","xrefs":{"Monarch":{"xref_id":"1011455"}}}


id: PR:P78966
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mam1 gene.","definition_xrefs":["UniProtKB:P78966","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating factor M secretion protein mam1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25B2.02c","synonyms":[{"name":"P-glycoprotein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-mam1","type":"exact"},{"name":"multiple drug resistance protein homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78966"}


id: GO:0004086
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of a reaction that results in the formation of carbamoyl phosphate.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete carbamoyl-phosphate synthase activity (obsolete GO:0004086)","synonyms":[{"name":"carbamoyl phosphate synthase activity","type":"exact"},{"name":"carbamoyl-phosphate synthase activity","type":"exact"}],"termid":"GO:0004086"}


id: GO:0008369
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. These are terms that have been removed from the active function ontology.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete molecular function (obsolete GO:0008369)","termid":"GO:0008369"}


id: GO:1904121
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Removes phosphatidylethanolamine from a membrane or a monolayer lipid particle, transports it through the aqueous phase while protected in a hydrophobic pocket, and brings it to an acceptor membrane or lipid particle.","definition_xrefs":["GOC:TermGenie","PMID:8606365","GO_REF:0000066"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transfer activity","termid":"GO:0120014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0120013"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0120013","GO:0005215"],"is_obsolete":false,"name":"phosphatidylethanolamine transfer activity","synonyms":[{"name":"intermembrane phosphatidylethanolamine transfer activity","type":"narrow"},{"name":"phosphatidylethanolamine carrier activity","type":"exact"},{"name":"phosphatidylethanolamine transporter activity","type":"broad"}],"termid":"GO:1904121"}


id: GO:0018734
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: butyrolactone + H2O = 4-hydroxybutanoate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete butyrolactone hydrolase activity (obsolete GO:0018734)","termid":"GO:0018734"}


id: MONDO:0023046
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"ectodermal dysplasia blindness","termid":"MONDO:0023046","xrefs":{"Monarch":{"xref_id":"0023046"}}}


id: FYPO:0004841
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein that is not normally found in the nucleus is observed there when the cell is subject to glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to nucleus","termid":"FYPO:0003453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"protein mislocalized to nucleus during glucose starvation","synonyms":[{"name":"ectopic protein localization to nucleus during glucose starvation","type":"exact"},{"name":"protein mislocalised to nucleus during glucose starvation","type":"exact"},{"name":"protein mislocalized to nucleus during cellular response to glucose starvation","type":"exact"},{"name":"protein mislocalized to nucleus during glucose depletion","type":"exact"},{"name":"protein mislocalized to nucleus during glucose deprivation","type":"exact"},{"name":"protein mislocalized to nucleus during glucose limitation","type":"related"}],"termid":"FYPO:0004841"}


id: PBO:0081132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFP3 divergent transcript","termid":"PBO:0081132"}


id: GO:0060907
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of macrophage cytokine production. Macrophage cytokine production is the appearance of a chemokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macrophage cytokine production","termid":"GO:0010935"},{"relation_name":"is_a","term_name":"positive regulation of myeloid leukocyte cytokine production involved in immune response","termid":"GO:0061081"},{"relation_name":"positively_regulates","term_name":"macrophage cytokine production","termid":"GO:0010934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of macrophage cytokine production","termid":"GO:0060907"}


id: MONDO:0003249
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Abnormal malignant growth of the cells that comprise the pineal parenchyma.","definition_xrefs":["NCIT:C3573"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thalamic cancer","termid":"MONDO:0003766"},{"relation_name":"is_a","term_name":"malignant endocrine neoplasm","termid":"MONDO:0021069"},{"relation_name":"is_a","term_name":"pineal body neoplasm","termid":"MONDO:0021232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pineal gland cancer","secondary_identifiers":["ICD10CM:C75.3","UMLS:C0153655","DOID:5032","NCIT:C6965","ICD9:194.4","MEDGEN:102284","SCTID:363483004"],"synonyms":[{"name":"cancer of pineal body","type":"exact"},{"name":"malignant neoplasm of pineal body","type":"exact"},{"name":"malignant neoplasm of pineal gland","type":"exact"},{"name":"malignant neoplasm of the pineal gland","type":"exact"},{"name":"malignant pineal area neoplasm","type":"exact"},{"name":"malignant pineal area tumor","type":"exact"},{"name":"malignant pineal area tumour","type":"exact"},{"name":"malignant pineal body neoplasm","type":"exact"},{"name":"malignant pineal gland neoplasm","type":"exact"},{"name":"malignant pineal gland tumor","type":"exact"},{"name":"malignant pineal gland tumour","type":"exact"},{"name":"malignant pineal region neoplasm","type":"exact"},{"name":"malignant pineal region tumor","type":"exact"},{"name":"malignant pineal region tumour","type":"exact"},{"name":"malignant tumor of pineal gland","type":"exact"},{"name":"malignant tumor of the pineal gland","type":"exact"},{"name":"malignant tumour of pineal gland","type":"exact"},{"name":"malignant tumour of the pineal gland","type":"exact"},{"name":"neoplasm of the pineal region","type":"broad"},{"name":"pineal body cancer","type":"exact"},{"name":"pinealoma","type":"related"},{"name":"pineocytic tumor","type":"broad"},{"name":"pineocytic tumour","type":"broad"},{"name":"tumor of the pineal region","type":"broad"},{"name":"tumour of the pineal region","type":"broad"}],"termid":"MONDO:0003249","xrefs":{"Monarch":{"xref_id":"0003249"}}}


id: GO:0043264
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Organized structure of distinctive morphology and function, not bounded by a lipid bilayer membrane and occurring outside the cell.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membraneless organelle","termid":"GO:0043228"},{"relation_name":"is_a","term_name":"extracellular organelle","termid":"GO:0043230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005575","GO:0005576"],"is_obsolete":false,"name":"extracellular membraneless organelle","synonyms":[{"name":"extracellular non-membrane-bounded organelle","type":"exact"},{"name":"extracellular non-membrane-enclosed organelle","type":"exact"}],"termid":"GO:0043264"}


id: GO:0036349
data:
  {"annotated_genes":["SJAG_00926"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105374],"is_not":false,"summary":null,"term":"GO:0036349"}]},"cv_name":"biological_process","definition":"The non-sexual aggregation of single-celled organisms mediated by the binding of cell wall proteins on one cell to galactose residues on the other.","definition_xrefs":["PMID:22098069","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flocculation","termid":"GO:0000128"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00926":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"galactose-specific flocculation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0098611"],"synonyms":[{"name":"cell-cell adhesion involved in galactose-specific flocculation","type":"exact"}],"termid":"GO:0036349","terms_by_termid":{"GO:0036349":null}}


id: GO:0050253
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: retinyl palmitate + H2O = retinol + palmitate + H+.","definition_xrefs":["RHEA:21508"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"retinyl-palmitate esterase activity","secondary_identifiers":["MetaCyc:RETINYL-PALMITATE-ESTERASE-RXN","Reactome:R-HSA-8848355","Reactome:R-HSA-2404133","Reactome:R-HSA-975593","Reactome:R-HSA-975594"],"synonyms":[{"name":"retinyl ester hydrolase activity","type":"related"},{"name":"retinyl palmitate hydrolase activity","type":"related"},{"name":"retinyl palmitate hydrolyase activity","type":"related"},{"name":"retinyl-palmitate palmitohydrolase activity","type":"related"}],"termid":"GO:0050253"}


id: MONDO:1010612
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pheochromocytoma that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feline neoplasm","termid":"MONDO:0700175"},{"relation_name":"is_a","term_name":"pheochromocytoma, non-human animal","termid":"MONDO:1010060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pheochromocytoma, domestic cat","secondary_identifiers":["OMIA:001268-9685"],"termid":"MONDO:1010612","xrefs":{"Monarch":{"xref_id":"1010612"}}}


id: GO:1902198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 3-methylbut-2-enoyl-CoA(4-).","definition_xrefs":["GOC:TermGenie","PMID:11231285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty-acyl-CoA metabolic process","termid":"GO:0035337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0055086","GO:0006629","GO:0008150","GO:0006790","GO:0044281"],"is_obsolete":false,"name":"3-methylbut-2-enoyl-CoA(4-) metabolic process","synonyms":[{"name":"3-methylbut-2-enoyl-CoA(4-) metabolism","type":"exact"}],"termid":"GO:1902198"}


id: PBO:0051729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrator complex subunit 2","termid":"PBO:0051729"}


id: MONDO:0011582
data:
  {"annotated_genes":["SJAG_03222"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86927],"is_not":false,"summary":null,"term":"MONDO:0011582"}]},"cv_name":"mondo","definition":"Any fatal multiple mitochondrial dysfunctions syndrome in which the cause of the disease is a mutation in the NFU1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatal multiple mitochondrial dysfunctions syndrome","termid":"MONDO:0017338"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03222":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"multiple mitochondrial dysfunctions syndrome 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:605711","MEDGEN:478062","Orphanet:401869","DOID:0080133","GARD:17661","UMLS:C3276432"],"synonyms":[{"name":"MMDS1","type":"related"},{"name":"Mmds","type":"broad"},{"name":"NFU1 deficiency","type":"exact"},{"name":"NFU1 fatal multiple mitochondrial dysfunctions syndrome","type":"exact"},{"name":"fatal multiple mitochondrial dysfunctions syndrome caused by mutation in NFU1","type":"exact"},{"name":"multiple mitochondrial dysfunctions syndrome 1","type":"exact"},{"name":"multiple mitochondrial dysfunctions syndrome type 1","type":"exact"}],"termid":"MONDO:0011582","terms_by_termid":{"MONDO:0011582":null},"xrefs":{"Monarch":{"xref_id":"0011582"}}}


id: GO:0000923
data:
  {"annotated_genes":["SJAG_03835","SJAG_02761","SJAG_02609","SJAG_03264","SJAG_03073","SJAG_07018","SJAG_02737","SJAG_01756","SJAG_01215","SJAG_03052","SJAG_00856","SJAG_02886"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[101902,102186,102801,103246,104140,108276,110683,111443,112425,114620,118799,119052],"is_not":false,"summary":null,"term":"GO:0000923"}]},"cv_name":"cellular_component","definition":"A microtubule organizing center formed by a band of gamma-tubulin that is recruited to a circumferential band of F-actin at the midpoint of a cell and which nucleates microtubules from the cell division site at the end of mitosis.","definition_xrefs":["PMID:11792817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule organizing center","termid":"GO:0005815"},{"relation_name":"part_of","term_name":"cell division site","termid":"GO:0032153"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00856":null,"SJAG_01215":null,"SJAG_01756":null,"SJAG_02609":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_02886":null,"SJAG_03052":null,"SJAG_03073":null,"SJAG_03264":null,"SJAG_03835":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005575","GO:0015630"],"is_obsolete":false,"name":"equatorial microtubule organizing center","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"EMTOC","type":"exact"},{"name":"equatorial microtubule organising centre","type":"exact"}],"termid":"GO:0000923","terms_by_termid":{"GO:0000923":null}}


id: PBO:0056110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LYPLA2 pseudogene 1","termid":"PBO:0056110"}


id: PBO:0031621
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_sporulation","termid":"PBO:0031621"}


id: GO:0019191
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of cellobiose from one side of a membrane to the other. Cellobiose, or 4-O-beta-D-glucopyranosyl-D-glucose, is a disaccharide that represents the basic repeating unit of cellulose.","definition_xrefs":["ISBN:0198506732","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide transmembrane transporter activity","termid":"GO:0015154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"cellobiose transmembrane transporter activity","secondary_identifiers":["GO:0019190"],"synonyms":[{"name":"cellobiose permease activity","type":"exact"}],"termid":"GO:0019191"}


id: GO:1990662
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of a S100A9 dimer and capable of binding to toll-like receptor 4 (TLR4) and the receptor for advanced glycation end products (RAGE) initiating signal transduction through NF-kappa-B pathways. Transports arachidonic acid between the cytosol and the NADPH oxidase complex at the plasma membrane in neutrophils as part of an inflammatory signal cascade leading to an oxidative burst. Complexes with microtubules to increase cell motility.","definition_xrefs":["PMID:15642721","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter complex","termid":"GO:1902495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"S100A9 complex","synonyms":[{"name":"S100A9 homodimer","type":"exact"}],"termid":"GO:1990662"}


id: MONDO:0003635
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A very rare breast adenocarcinoma with sebaceous differentiation.","definition_xrefs":["NCIT:C40369"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast adenocarcinoma","termid":"MONDO:0004988"},{"relation_name":"is_a","term_name":"invasive breast carcinoma","termid":"MONDO:0006256"},{"relation_name":"is_a","term_name":"sebaceous adenocarcinoma","termid":"MONDO:0006962"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"sebaceous breast carcinoma","secondary_identifiers":["MEDGEN:276789","UMLS:C1519207","DOID:5760"],"synonyms":[{"name":"breast sebaceous adenocarcinoma","type":"exact"},{"name":"sebaceous adenocarcinoma of breast","type":"exact"},{"name":"sebaceous breast carcinoma","type":"exact"}],"termid":"MONDO:0003635","xrefs":{"Monarch":{"xref_id":"0003635"}}}


id: MONDO:0009608
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine malabsorption syndrome","secondary_identifiers":["MESH:C562682","MEDGEN:78693","icd11.foundation:1061270147","SCTID:45812003","OMIM:250900","UMLS:C0268622"],"synonyms":[{"name":"Smith-strang disease","type":"related"},{"name":"methionine malabsorption syndrome","type":"exact"},{"name":"oasthouse urine disease","type":"related"}],"termid":"MONDO:0009608","xrefs":{"Monarch":{"xref_id":"0009608"}}}


id: PR:P78804
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An NADP-specific glutamate dehydrogenase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04676"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADP-specific glutamate dehydrogenase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC622.12c","secondary_identifiers":["UniProtKB:P78804"],"synonyms":[{"name":"NADP-GDH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"NADP-dependent glutamate dehydrogenase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-gdhA","type":"exact"}],"termid":"PR:P78804"}


id: GO:0031697
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a beta-1 adrenergic receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adrenergic receptor binding","termid":"GO:0031690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"beta-1 adrenergic receptor binding","synonyms":[{"name":"beta-1 adrenergic receptor ligand","type":"narrow"}],"termid":"GO:0031697"}


id: PBO:0046372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleoside triphosphate diphosphohydrolase 7","termid":"PBO:0046372"}


id: MONDO:0008052
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myopathy with storage of glycoproteins and Glycosaminoglycans","secondary_identifiers":["MESH:C563542","UMLS:C1834532","OMIM:160570","MEDGEN:371846"],"synonyms":[{"name":"myopathy with storage of glycoproteins and Glycosaminoglycans","type":"exact"}],"termid":"MONDO:0008052","xrefs":{"Monarch":{"xref_id":"0008052"}}}


id: MONDO:0005983
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A severe, chronic fungal skin infection, usually of the scalp, characterized by the development of thick, yellow cup-shaped crusts and scarring over hair follicles.","definition_xrefs":["NCIT:C35072"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tinea infection","termid":"MONDO:0005982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"tinea favosa","secondary_identifiers":["MEDGEN:52758","ICD10CM:B35","SCTID:85375000","UMLS:C0040254","MESH:D014007","DOID:4336"],"synonyms":[{"name":"favus","type":"exact"}],"termid":"MONDO:0005983","xrefs":{"Monarch":{"xref_id":"0005983"}}}


id: FYPO:0005270
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is decreased during a cellular response to osmotic stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein kinase activity","termid":"FYPO:0001382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000661","FYPO:0000707","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"decreased protein kinase activity during cellular response to osmotic stress","termid":"FYPO:0005270"}


id: MONDO:1010663
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autoimmune thrombocytopenic purpura that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune thrombocytopenic purpura, non-human animal","termid":"MONDO:1010081"},{"relation_name":"is_a","term_name":"autoimmune thrombocytopenia, dog","termid":"MONDO:1010625"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autoimmune thrombocytopenic purpura, dog","secondary_identifiers":["OMIA:001104-9615"],"termid":"MONDO:1010663","xrefs":{"Monarch":{"xref_id":"1010663"}}}


id: GO:0043416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of skeletal muscle.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to external stimulus","termid":"GO:0032101"},{"relation_name":"is_a","term_name":"regulation of developmental growth","termid":"GO:0048638"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal development","termid":"GO:2000026"},{"relation_name":"regulates","term_name":"skeletal muscle tissue regeneration","termid":"GO:0043403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of skeletal muscle tissue regeneration","termid":"GO:0043416"}


id: PBO:0083714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein that plays a central role in ERAD; forms HRD complex with Hrd1p and ER-associated protein degradation (ERAD) determinants that engages in lumen to cytosol communication and coordination of ERAD events","termid":"PBO:0083714"}


id: MONDO:0100058
data:
  {"annotated_genes":["SJAG_04149"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87303],"is_not":false,"summary":null,"term":"MONDO:0100058"}]},"cv_name":"mondo","definition":"Elevated levels of plasma valine and leucine/isoleucine levels, associated with symptoms of headache and mild memory loss and attributed to biallelic variants in the BCAT2 gene. BCAT2 encodes branched-chain aminotransferase 2 which catalyzes the transamination of the branched chain amino acids to their respective α-keto acids.","definition_xrefs":["PMID:25653144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of branched-chain amino acid metabolism","termid":"MONDO:0019242"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04149":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"hypervalinemia and hyperleucine-isoleucinemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0060950","OMIM:618850","MEDGEN:1719306","UMLS:C5394277"],"synonyms":[{"name":"HVLI","type":"exact"},{"name":"branched-chain aminotransferase deficiency","type":"exact"},{"name":"hypervalinemia and hyperleucine-isoleucinemia","type":"exact"},{"name":"hypervalinemia or hyperleucine-isoleucinemia","type":"exact"}],"termid":"MONDO:0100058","terms_by_termid":{"MONDO:0100058":null},"xrefs":{"Monarch":{"xref_id":"0100058"}}}


id: PBO:0082177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosylation factor (ARF) GTPase activating protein (GAP) effector; involved in Trans-Golgi-Network (TGN) transport; contains C2C2H2 cysteine/histidine motif","termid":"PBO:0082177"}


id: GO:0051310
data:
  {"annotated_genes":["SJAG_03220","SJAG_02624","SJAG_00646","SJAG_04745","SJAG_00794","SJAG_04412","SJAG_03543","SJAG_03126","SJAG_00930","SJAG_02346","SJAG_01278","SJAG_00918","SJAG_01370","SJAG_03540","SJAG_03437","SJAG_01211","SJAG_03048","SJAG_04076","SJAG_02761","SJAG_02814","SJAG_04280","SJAG_05019","SJAG_00678","SJAG_02451","SJAG_01775","SJAG_00302","SJAG_03683","SJAG_01805","SJAG_04040","SJAG_04623","SJAG_05319","SJAG_05295","SJAG_04140","SJAG_03926","SJAG_00768","SJAG_01601","SJAG_02336","SJAG_00082","SJAG_01082","SJAG_02286","SJAG_03989","SJAG_02731","SJAG_00418","SJAG_01613","SJAG_03217","SJAG_00207","SJAG_05266","SJAG_02045","SJAG_01224","SJAG_04508","SJAG_07002","SJAG_03327","SJAG_04884","SJAG_01837","SJAG_05220","SJAG_01297","SJAG_04259","SJAG_00335","SJAG_03698","SJAG_05290","SJAG_01371"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95643,89683],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051456"},{"annotations":[112162,93197,66733,97376,73754,118387,70180,74680,92805,113538,77460,89569,89817,102198,112208,107302,99719,91854],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051315"},{"annotations":[100434,89626,95607,109658,118927,92099,103157,115644,117401],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031619"},{"annotations":[110095],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0099607"},{"annotations":[96590,111753],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0099606"},{"annotations":[96008,105717,110099,100436,101043],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990942"},{"annotations":[91176,105365,96009,110100,64638,115087,114479,90956,111739,102342,105718,91563,114478,95645,100438,79728,92793,116360,120573,118779,104258,110729,100938,109342,115956],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990758"},{"annotations":[104184],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902424"},{"annotations":[113816,107011,117870],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902425"},{"annotations":[95619,104204,91816,118541,113056],"is_not":false,"rel_names":["part_of","regulates"],"summary":null,"term":"GO:0140429"},{"annotations":[118544],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904967"},{"annotations":[110987],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031134"},{"annotations":[100442,97131,95624,107305,109662,99720,117788,118781,109344,92795,91565,110988,111741,112165,112209,115088,97377,115958,102344,103161,104259,110731,90958],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051455"}]},"cv_name":"biological_process","definition":"A chromosome localization process whereby chromosomes are positioned in a specific order and orientation at the metaphase plate (spindle equator), during chromosome segregation. This alignment ensures that each daughter cell will receive the correct number of chromosomes during cell division.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome localization","termid":"GO:0050000"},{"relation_name":"part_of","term_name":"nuclear chromosome segregation","termid":"GO:0098813"}],"gene_count":61,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00207":null,"SJAG_00302":null,"SJAG_00335":null,"SJAG_00418":null,"SJAG_00646":null,"SJAG_00678":null,"SJAG_00768":null,"SJAG_00794":null,"SJAG_00918":null,"SJAG_00930":null,"SJAG_01082":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01278":null,"SJAG_01297":null,"SJAG_01370":null,"SJAG_01371":null,"SJAG_01601":null,"SJAG_01613":null,"SJAG_01775":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_02045":null,"SJAG_02286":null,"SJAG_02336":null,"SJAG_02346":null,"SJAG_02451":null,"SJAG_02624":null,"SJAG_02731":null,"SJAG_02761":null,"SJAG_02814":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_03217":null,"SJAG_03220":null,"SJAG_03327":null,"SJAG_03437":null,"SJAG_03540":null,"SJAG_03543":null,"SJAG_03683":null,"SJAG_03698":null,"SJAG_03926":null,"SJAG_03989":null,"SJAG_04040":null,"SJAG_04076":null,"SJAG_04140":null,"SJAG_04259":null,"SJAG_04280":null,"SJAG_04412":null,"SJAG_04508":null,"SJAG_04623":null,"SJAG_04745":null,"SJAG_04884":null,"SJAG_05019":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05290":null,"SJAG_05295":null,"SJAG_05319":null,"SJAG_07002":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0007049"],"is_obsolete":false,"name":"metaphase chromosome alignment","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"chromosome congression","type":"narrow"}],"termid":"GO:0051310","terms_by_termid":{"GO:0031134":null,"GO:0031619":null,"GO:0051315":null,"GO:0051455":null,"GO:0051456":null,"GO:0099606":null,"GO:0099607":null,"GO:0140429":null,"GO:1902424":null,"GO:1902425":null,"GO:1904967":null,"GO:1990758":null,"GO:1990942":null}}


id: MONDO:1010923
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Muscular dystrophy, Duchenne type that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy, Duchenne type, non-human animal","termid":"MONDO:1010199"},{"relation_name":"is_a","term_name":"muscular dystrophy, dog","termid":"MONDO:1010911"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscular dystrophy, Duchenne type, dog","secondary_identifiers":["OMIA:001081-9615"],"termid":"MONDO:1010923","xrefs":{"Monarch":{"xref_id":"1010923"}}}


id: PBO:0051378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 5-2","termid":"PBO:0051378"}


id: GO:0022016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The division of a glioblast in the pallium. A glioblast is a dividing precursor cell that gives rise to glial cells.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:jid","GOC:dph","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glioblast division","termid":"GO:0048860"},{"relation_name":"part_of","term_name":"pallium cell proliferation in forebrain","termid":"GO:0022013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pallium glioblast division","synonyms":[{"name":"glioblast cell division in pallium","type":"exact"}],"termid":"GO:0022016"}


id: PBO:0058277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4654","termid":"PBO:0058277"}


id: MONDO:0016420
data:
  {"annotated_genes":["SJAG_01356","SJAG_02885"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87889,87890],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010819"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary macular dystrophy","termid":"MONDO:0020242"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01356":null,"SJAG_02885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"familial flecked retinopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD10CM:H35.5","Orphanet:227786","icd11.foundation:979898273"],"synonyms":[{"name":"hereditary flecked retinopathy","type":"exact"}],"termid":"MONDO:0016420","terms_by_termid":{"MONDO:0010819":null},"xrefs":{"Monarch":{"xref_id":"0016420"}}}


id: PBO:0040483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ataxin 3 like","termid":"PBO:0040483"}


id: MONDO:0008747
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Type 3 oculocutaneous albinism (OCA3) is a form of oculocutaneous albinism (OCA) characterized by rufous or brown albinism and occurring mainly in the African population.","definition_xrefs":["Orphanet:79433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oculocutaneous albinism","termid":"MONDO:0018910"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"oculocutaneous albinism type 3","secondary_identifiers":["ICD9:270.2","OMIM:203290","GARD:4039","SCTID:63450009","UMLS:C0342683","DOID:0070097","icd11.foundation:1565320806","MEDGEN:87450","OMIM:278400","MESH:C537731"],"synonyms":[{"name":"OCA3","type":"exact"},{"name":"ROCA","type":"related"},{"name":"Red oculocutaneous albinism","type":"exact"},{"name":"TYRP1 oculocutaneous albinism","type":"exact"},{"name":"Xanthism","type":"related"},{"name":"albinism 3","type":"related"},{"name":"albinism, oculocutaneous, type 3","type":"related"},{"name":"albinism, oculocutaneous, type III","type":"related"},{"name":"oculocutaneous albinism caused by mutation in TYRP1","type":"exact"},{"name":"oculocutaneous albinism type 3","type":"exact"},{"name":"oculocutaneous albinism type III","type":"related"},{"name":"oculocutaneous albinism, type 3","type":"related"},{"name":"rufous OCA","type":"related"},{"name":"rufous oculocutaneous albinism","type":"exact"},{"name":"xanthous oculocutaneous albinism","type":"exact"}],"termid":"MONDO:0008747","xrefs":{"Monarch":{"xref_id":"0008747"}}}


id: GO:0031679
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: NADH + H+ + plastoquinone = NAD+ + plastoquinol.","definition_xrefs":["GOC:mah","EC:1.6.99.6"],"gene_count":0,"genotype_count":0,"name":"obsolete NADH dehydrogenase (plastoquinone) activity (obsolete GO:0031679)","synonyms":[{"name":"NADH:plastoquinone reductase activity","type":"exact"}],"termid":"GO:0031679"}


id: MONDO:0018537
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Squamous cell carcinoma of the gallbladder and extrahepatic biliary tract is a rare hepatic and biliary tract tumor, arising either in the gallbladder itself or in the epithelium lining the extrahepatic biliary tree, the cystic duct and peribiliary glands. It is characterized by a substantial keratinization with abundant keratohyalin pearls and central deposition of dense keratin material within infiltrative nests and locally aggressive nature. In the early stages of the disease symptoms are vague and nonspecific (abdominal pain, jaundice and vomiting). In the advanced stages it may present with a bulky tumor and symptoms of adjacent organ involvement.","definition_xrefs":["Orphanet:424996"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrahepatic bile duct squamous cell carcinoma","termid":"MONDO:0006203"},{"relation_name":"is_a","term_name":"carcinoma of gallbladder and extrahepatic biliary tract","termid":"MONDO:0018918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"squamous cell carcinoma of gallbladder and extrahepatic biliary tract","secondary_identifiers":["GARD:21792","SCTID:766978002","UMLS:C4707898","MEDGEN:1635098"],"synonyms":[{"name":"squamous cell carcinoma of gallblader and EBT","type":"exact"}],"termid":"MONDO:0018537","xrefs":{"Monarch":{"xref_id":"0018537"}}}


id: PBO:0048414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GATA binding protein 3","termid":"PBO:0048414"}


id: GO:2000338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of chemokine (C-X-C motif) ligand 1 production.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chemokine production","termid":"GO:0032642"},{"relation_name":"regulates","term_name":"chemokine (C-X-C motif) ligand 1 production","termid":"GO:0072566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of chemokine (C-X-C motif) ligand 1 production","synonyms":[{"name":"regulation of CXCL1 production","type":"exact"},{"name":"regulation of KC production","type":"exact"},{"name":"regulation of SCYB1 production","type":"exact"},{"name":"regulation of keratinocyte derived chemokine production","type":"exact"}],"termid":"GO:2000338"}


id: PBO:0065416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit beta 3 pseudogene 2","termid":"PBO:0065416"}


id: GO:0009171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of purine deoxyribonucleoside monophosphate, a compound consisting of a purine base linked to a deoxyribose sugar esterified with phosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside monophosphate biosynthetic process","termid":"GO:0009127"},{"relation_name":"is_a","term_name":"deoxyribonucleoside monophosphate biosynthetic process","termid":"GO:0009157"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside monophosphate metabolic process","termid":"GO:0009170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"purine deoxyribonucleoside monophosphate biosynthetic process","synonyms":[{"name":"purine deoxyribonucleoside monophosphate anabolism","type":"exact"},{"name":"purine deoxyribonucleoside monophosphate biosynthesis","type":"exact"},{"name":"purine deoxyribonucleoside monophosphate formation","type":"exact"},{"name":"purine deoxyribonucleoside monophosphate synthesis","type":"exact"}],"termid":"GO:0009171"}


id: PBO:0067141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 189, pseudogene","termid":"PBO:0067141"}


id: PR:Q09771
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atf31 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor atf31 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F3.02","synonyms":[{"name":"Spom972h-atf31","type":"exact"}],"termid":"PR:Q09771"}


id: PR:Q9UUN5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A prenylated Rab acceptor protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04300","PRO:DNx","PANTHER:PTHR19317:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRA1-like protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC306.02c","secondary_identifiers":["UniProtKB:Q9UUN5"],"synonyms":[{"name":"Spom972h-RABAC1","type":"exact"}],"termid":"PR:Q9UUN5"}


id: PBO:0045334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dedicator of cytokinesis 9","termid":"PBO:0045334"}


id: MONDO:0012850
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nephrolithiasis/osteoporosis, hypophosphatemic","termid":"MONDO:0000079"},{"relation_name":"is_a","term_name":"impaired renal function disease","termid":"MONDO:0001343"},{"relation_name":"is_a","term_name":"inherited kidney disorder","termid":"MONDO:0100191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0005497"],"is_obsolete":false,"name":"hypophosphatemic nephrolithiasis/osteoporosis 1","secondary_identifiers":["UMLS:C2676786","OMIM:612286","MEDGEN:436776","GARD:18346","DOID:0080077","MESH:C567363"],"synonyms":[{"name":"NPHLOP1","type":"related"},{"name":"hypophosphatemic nephrolithiasis/osteoporosis type 1","type":"exact"},{"name":"nephrolithiasis/osteoporosis, hypophosphatemic, 1","type":"related"},{"name":"nephrolithiasis/osteoporosis, hypophosphatemic, type 1","type":"exact"}],"termid":"MONDO:0012850","xrefs":{"Monarch":{"xref_id":"0012850"}}}


id: GO:0010609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of gene expression after the production of a mRNA transcript by its transport into, or maintenance in, a specific location within the cell.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular mRNA localization","termid":"GO:0008298"},{"relation_name":"is_a","term_name":"post-transcriptional regulation of gene expression","termid":"GO:0010608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"mRNA localization resulting in post-transcriptional regulation of gene expression","synonyms":[{"name":"mRNA localisation resulting in posttranscriptional regulation of gene expression","type":"exact"},{"name":"mRNA localization resulting in posttranscriptional regulation of gene expression","type":"exact"},{"name":"posttranscriptional regulation of gene expression by mRNA localisation","type":"exact"},{"name":"posttranscriptional regulation of gene expression by mRNA localization","type":"exact"}],"termid":"GO:0010609"}


id: PBO:0041604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CA15 pseudogene 1","termid":"PBO:0041604"}


id: PBO:0028950
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_mislocalized_to_eisosome","termid":"PBO:0028950"}


id: GO:0099189
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the spectrin-associated cytoskeleton contained within the postsynapse.","definition_xrefs":["GOC:dos","PMID:28576936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spectrin-associated cytoskeleton","termid":"GO:0014731"},{"relation_name":"is_a","term_name":"postsynaptic cytoskeleton","termid":"GO:0099571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"postsynaptic spectrin-associated cytoskeleton","termid":"GO:0099189"}


id: MONDO:0007465
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distichiasis with congenital anomalies of the heart and peripheral vasculature","secondary_identifiers":["MEDGEN:338862","Orphanet:1683","MESH:C565092","UMLS:C1852062","OMIM:126320"],"synonyms":[{"name":"distichiasis with congenital anomalies of the heart and peripheral vasculature","type":"exact"},{"name":"distichiasis-congenital heart defects-peripheral vascular anomalies syndrome","type":"exact"}],"termid":"MONDO:0007465","xrefs":{"Monarch":{"xref_id":"0007465"}}}


id: PBO:0090949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-splicing endonuclease subunit Sen15","termid":"PBO:0090949"}


id: FYPO:0003810
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which  mitochondria are smaller and more numerous than normal. Total mitochondrial volume is usually similar to normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"small fragmented mitochondria","termid":"FYPO:0007193"},{"relation_name":"has_part","term_name":"mitochondria present in increased numbers","termid":"FYPO:0007194"},{"relation_name":"has_part","term_name":"normal mitochondrial volume","termid":"FYPO:0007210"},{"relation_name":"is_a","term_name":"small fragmented mitochondria","termid":"FYPO:0007193"},{"relation_name":"is_a","term_name":"normal mitochondrial volume","termid":"FYPO:0007210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000257","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"small fragmented mitochondria present in increased numbers","synonyms":[{"name":"fragmented mitochondria","type":"related"},{"name":"small mitochondria present in increased numbers during mitotic cell cycle","type":"related"},{"name":"small mitochondria present in increased numbers during vegetative growth","type":"exact"}],"termid":"FYPO:0003810"}


id: PBO:0080546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WBP1L pseudogene 5","termid":"PBO:0080546"}


id: GO:0009251
data:
  {"annotated_genes":["SJAG_00115","SJAG_03646","SJAG_01888","SJAG_03851","SJAG_06309","SJAG_04963","SJAG_01783","SJAG_04327","SJAG_01171","SJAG_02076","SJAG_05001","SJAG_01561"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72227,72330,75005,76843,78805],"is_not":false,"summary":null,"term":"GO:0009251"},{"annotations":[105126],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005980"},{"annotations":[75137,74845,73564,73824,80596,81608],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061723"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glucans, polysaccharides consisting only of glucose residues.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide catabolic process","termid":"GO:0000272"},{"relation_name":"is_a","term_name":"glucan metabolic process","termid":"GO:0044042"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00115":null,"SJAG_01171":null,"SJAG_01561":null,"SJAG_01783":null,"SJAG_01888":null,"SJAG_02076":null,"SJAG_03646":null,"SJAG_03851":null,"SJAG_04327":null,"SJAG_04963":null,"SJAG_05001":null,"SJAG_06309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"glucan catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"glucan breakdown","type":"exact"},{"name":"glucan catabolism","type":"exact"},{"name":"glucan degradation","type":"exact"}],"termid":"GO:0009251","terms_by_termid":{"GO:0005980":null,"GO:0009251":null,"GO:0061723":null}}


id: GO:0035848
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which anatomical structures of the oviduct are generated and organized. An oviduct is a tube through which an ova passes from the ovary to the uterus, or from the ovary to the outside of the organism.","definition_xrefs":["GOC:yaf","PMID:22918811"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"is_a","term_name":"tube morphogenesis","termid":"GO:0035239"},{"relation_name":"part_of","term_name":"oviduct development","termid":"GO:0060066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oviduct morphogenesis","synonyms":[{"name":"fallopian tube morphogenesis","type":"narrow"}],"termid":"GO:0035848"}


id: GO:0097178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a ruffle, a projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork. The formation of ruffles (also called membrane ruffling) is thought to be controlled by a group of enzymes known as Rho GTPases, specifically RhoA, Rac1 and cdc42.","definition_xrefs":["PMID:12556481","Wikipedia:Membrane_ruffling","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ruffle organization","termid":"GO:0031529"},{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection assembly","termid":"GO:0120031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"ruffle assembly","synonyms":[{"name":"membrane ruffle formation","type":"exact"},{"name":"membrane ruffling","type":"exact"}],"termid":"GO:0097178"}


id: MONDO:0016937
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndrome caused by partial chromosomal duplication","termid":"MONDO:0000762"},{"relation_name":"is_a","term_name":"chromosome 19 disorder","termid":"MONDO:0700024"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of chromosome 19","secondary_identifiers":["GARD:20857","UMLS:C4518507","Orphanet:262687","SCTID:726358004","MEDGEN:1379548"],"synonyms":[{"name":"partial duplication of chromosome type 19","type":"exact"},{"name":"partial trisomy of chromosome 19","type":"exact"}],"termid":"MONDO:0016937","xrefs":{"Monarch":{"xref_id":"0016937"}}}


id: GO:0098038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Process by which a transposable element is excised from the donor site and integrated at the target site without replication of the element. Also referred to as cut-and-paste transposition.","definition_xrefs":["PMID:2553270","GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA transposition","termid":"GO:0006313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006310","GO:0006259"],"is_obsolete":false,"name":"non-replicative DNA transposition","synonyms":[{"name":"cut-and-paste transposition","type":"exact"},{"name":"non-replicative transposition, DNA-mediated","type":"exact"}],"termid":"GO:0098038"}


id: PBO:0053474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 443","termid":"PBO:0053474"}


id: PBO:0063678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piggyBac transposable element derived 4 pseudogene 2","termid":"PBO:0063678"}


id: GO:0048642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of skeletal muscle tissue development.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of striated muscle tissue development","termid":"GO:0045843"},{"relation_name":"is_a","term_name":"regulation of skeletal muscle tissue development","termid":"GO:0048641"},{"relation_name":"negatively_regulates","term_name":"skeletal muscle tissue development","termid":"GO:0007519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of skeletal muscle tissue development","synonyms":[{"name":"down regulation of skeletal muscle development","type":"exact"},{"name":"down-regulation of skeletal muscle development","type":"exact"},{"name":"downregulation of skeletal muscle development","type":"exact"},{"name":"inhibition of skeletal muscle development","type":"narrow"}],"termid":"GO:0048642"}


id: GO:0046371
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dTDP-mannose, a substance composed of mannose in glycosidic linkage with deoxyribosylthymine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar metabolic process","termid":"GO:0009225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"dTDP-mannose metabolic process","synonyms":[{"name":"dTDP-mannose metabolism","type":"exact"}],"termid":"GO:0046371"}


id: PR:O94703
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase I subunit RPA12 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11239:SF3","OMA:SCHPO04551"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I subunit RPA12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1259.03","secondary_identifiers":["UniProtKB:O94703"],"synonyms":[{"name":"DNA-directed RNA polymerase I 13.1 kDa polypeptide (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ZNRD1","type":"exact"}],"termid":"PR:O94703"}


id: GO:1902060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sporocarp development involved in sexual reproduction.","definition_xrefs":["GOC:TermGenie","GOC:di","PMID:23480775"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of spore-bearing organ development","termid":"GO:0075261"},{"relation_name":"is_a","term_name":"regulation of sporocarp development involved in sexual reproduction","termid":"GO:1902058"},{"relation_name":"positively_regulates","term_name":"sporocarp development involved in sexual reproduction","termid":"GO:0000909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of sporocarp development involved in sexual reproduction","synonyms":[{"name":"activation of ascus development","type":"narrow"},{"name":"activation of fruiting body development involved in sexual reproduction","type":"broad"},{"name":"activation of fruiting body formation involved in sexual reproduction","type":"broad"},{"name":"activation of perfect stage fruiting body development","type":"narrow"},{"name":"activation of sporocarp development involved in sexual reproduction","type":"narrow"},{"name":"positive regulation of ascus development","type":"narrow"},{"name":"positive regulation of fruiting body development involved in sexual reproduction","type":"broad"},{"name":"positive regulation of fruiting body formation involved in sexual reproduction","type":"broad"},{"name":"positive regulation of perfect stage fruiting body development","type":"narrow"},{"name":"up regulation of ascus development","type":"narrow"},{"name":"up regulation of fruiting body development involved in sexual reproduction","type":"broad"},{"name":"up regulation of fruiting body formation involved in sexual reproduction","type":"broad"},{"name":"up regulation of perfect stage fruiting body development","type":"narrow"},{"name":"up regulation of sporocarp development involved in sexual reproduction","type":"exact"},{"name":"up-regulation of ascus development","type":"narrow"},{"name":"up-regulation of fruiting body development involved in sexual reproduction","type":"broad"},{"name":"up-regulation of fruiting body formation involved in sexual reproduction","type":"broad"},{"name":"up-regulation of perfect stage fruiting body development","type":"narrow"},{"name":"up-regulation of sporocarp development involved in sexual reproduction","type":"exact"},{"name":"upregulation of ascus development","type":"narrow"},{"name":"upregulation of fruiting body development involved in sexual reproduction","type":"broad"},{"name":"upregulation of fruiting body formation involved in sexual reproduction","type":"broad"},{"name":"upregulation of perfect stage fruiting body development","type":"narrow"},{"name":"upregulation of sporocarp development involved in sexual reproduction","type":"exact"}],"termid":"GO:1902060"}


id: SO:0001658
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An NTR is a nested repeat of two distinct tandem motifs interspersed with each other.","definition_xrefs":["SO:AF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nested_repeat","termid":"SO:0001649"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nested_tandem_repeat","synonyms":[{"name":"NTR","type":"exact"},{"name":"nested tandem repeat","type":"exact"}],"termid":"SO:0001658"}


id: PBO:0077621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymosin beta 10 pseudogene 2","termid":"PBO:0077621"}


id: GO:0033484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of nitric oxide within a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular chemical homeostasis","termid":"GO:0055082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular nitric oxide homeostasis","synonyms":[{"name":"NO homeostasis","type":"broad"},{"name":"cellular nitric oxide homeostasis","type":"exact"},{"name":"nitric oxide homeostasis","type":"broad"}],"termid":"GO:0033484"}


id: GO:1902381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 11-oxo-beta-amyrin.","definition_xrefs":["PMID:22128119","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentacyclic triterpenoid metabolic process","termid":"GO:0019742"},{"relation_name":"is_a","term_name":"ketone metabolic process","termid":"GO:0042180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"11-oxo-beta-amyrin metabolic process","synonyms":[{"name":"11-oxo-beta-amyrin metabolism","type":"exact"}],"termid":"GO:1902381"}


id: GO:0048033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving heme O, a derivative of heme containing a 17-carbon hydroxyethylfarnesyl side chain at position 8 of the tetrapyrrole macrocycle.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heme metabolic process","termid":"GO:0042168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"heme O metabolic process","synonyms":[{"name":"haem O metabolic process","type":"exact"},{"name":"haem O metabolism","type":"exact"},{"name":"heme O metabolism","type":"exact"}],"termid":"GO:0048033"}


id: PBO:0052432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"klotho beta","termid":"PBO:0052432"}


id: PBO:0080131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VANGL planar cell polarity protein 1","termid":"PBO:0080131"}


id: PBO:0047035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 98 member C","termid":"PBO:0047035"}


id: GO:0097277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any biological process involved in the maintenance of an internal steady state of urea at the level of the cell.","definition_xrefs":["PMID:12695560","GOC:yaf"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular urea homeostasis (obsolete GO:0097277)","termid":"GO:0097277"}


id: MONDO:0000419
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete 3-Methylcrotonyl-CoA carboxylase deficiency (obsolete MONDO:0000419)","termid":"MONDO:0000419","xrefs":{"Monarch":{"xref_id":"0000419"}}}


id: PBO:0091757
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"II:g.2053516_2053517insC","termid":"PBO:0091757"}


id: GO:1900353
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of methanofuran biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"positive regulation of pteridine metabolic process","termid":"GO:0045864"},{"relation_name":"is_a","term_name":"regulation of methanofuran biosynthetic process","termid":"GO:1900351"},{"relation_name":"is_a","term_name":"positive regulation of methanofuran metabolic process","termid":"GO:1900356"},{"relation_name":"positively_regulates","term_name":"methanofuran biosynthetic process","termid":"GO:2001120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of methanofuran biosynthetic process","synonyms":[{"name":"activation of methanofuran biosynthesis","type":"exact"},{"name":"activation of methanofuran biosynthetic process","type":"narrow"},{"name":"positive regulation of methanofuran biosynthesis","type":"exact"},{"name":"up regulation of methanofuran biosynthesis","type":"exact"},{"name":"up regulation of methanofuran biosynthetic process","type":"exact"},{"name":"up-regulation of methanofuran biosynthesis","type":"exact"},{"name":"up-regulation of methanofuran biosynthetic process","type":"exact"},{"name":"upregulation of methanofuran biosynthesis","type":"exact"},{"name":"upregulation of methanofuran biosynthetic process","type":"exact"}],"termid":"GO:1900353"}


id: GO:0045239
data:
  {"annotated_genes":["SJAG_06382","SJAG_01524","SJAG_03163","SJAG_02464","SJAG_03813","SJAG_03290"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[65188,73494,108570,71969],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045252"},{"annotations":[116833,77072],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009361"}]},"cv_name":"cellular_component","definition":"Any of the heteromeric enzymes that act in the TCA cycle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01524":null,"SJAG_02464":null,"SJAG_03163":null,"SJAG_03290":null,"SJAG_03813":null,"SJAG_06382":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"tricarboxylic acid cycle heteromeric enzyme complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"TCA cycle enzyme complex","type":"exact"}],"termid":"GO:0045239","terms_by_termid":{"GO:0009361":null,"GO:0045252":null}}


id: MONDO:0016940
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosome 3p duplication is a chromosome abnormality that occurs when there is an extra copy of genetic material on the short arm (p) of chromosome 3. The severity of the condition and the signs and symptoms depend on the size and location of the duplication and which genes are involved. Features that often occur in people with chromosome 3p duplication include developmental delay, intellectual disability, behavioral problems and distinctive facial features. Chromosome 3p duplication can be de novo or inherited from a parent with a balanced translocation. Treatment is based on the signs and symptoms present in each person.","definition_xrefs":["GARD:0005343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of chromosome 3","termid":"MONDO:0016923"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of the short arm of chromosome 3","secondary_identifiers":["GARD:5343","UMLS:C5679720","icd11.foundation:514472294","MEDGEN:1826042","Orphanet:262707","MESH:C536811"],"synonyms":[{"name":"3p duplication","type":"related"},{"name":"3p trisomy","type":"related"},{"name":"Duplication 3p","type":"related"},{"name":"chromosome 3p duplication","type":"related"},{"name":"partial duplication of chromosome 3p","type":"exact"},{"name":"partial duplication of the short arm of chromosome type 3","type":"exact"},{"name":"partial trisomy 3p","type":"related"},{"name":"partial trisomy of chromosome 3p","type":"exact"},{"name":"partial trisomy of the short arm of chromosome 3","type":"exact"},{"name":"trisomy 3p","type":"related"}],"termid":"MONDO:0016940","xrefs":{"Monarch":{"xref_id":"0016940"}}}


id: PR:000085720
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.1, initiator methionine removed K36-methylated form (Schizosaccharomyces pombe) whose methylation type is trimethylation. Example: UniProtKB:P09988, 2-136, Lys-37, MOD:00083.","definition_xrefs":["PRO:DAN","PomBase:VW","PMID:37459529"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hht1/Me3(K36)","pombase_gene_id":"SPAC1834.04","synonyms":[{"name":"PRO_0000221366, Lys-37, MOD:00083","type":"related"},{"name":"PomBase_original_PRO_term_name: histone H3.1, initiator methionine removed K36-trimethylated form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hht1/InitMet-/K36Me3","type":"exact"},{"name":"UniProtKB:P09988, 2-136, Lys-37, MOD:00083","type":"related"},{"name":"hht1/Me3(K36)","type":"exact"}],"termid":"PR:000085720"}


id: MONDO:0002506
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete early myoclonic encephalopathy (obsolete MONDO:0002506)","termid":"MONDO:0002506","xrefs":{"Monarch":{"xref_id":"0002506"}}}


id: PBO:0080578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WDR4 pseudogene 2","termid":"PBO:0080578"}


id: MONDO:0020130
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete malformation of the cerebellar vermis (obsolete MONDO:0020130)","secondary_identifiers":["Orphanet:98514"],"termid":"MONDO:0020130","xrefs":{"Monarch":{"xref_id":"0020130"}}}


id: PBO:0085312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidic acid transfer protein; plays a role in phospholipid metabolism by transporting phosphatidic acid from the outer to the inner mitochondrial membrane; localizes to the mitochondrial intermembrane space; null mutant has altered cardiolipin and phosphatidic acid levels; ortholog of human PRELI","termid":"PBO:0085312"}


id: FYPO:0005115
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is elongated and has an abnormal shape featuring a constriction at the center of the cell, corresponding to the cell division site. In some such cells, the diameter at the ends is much greater than in wild-type cells.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated vegetative cell","termid":"FYPO:0001122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000005"],"is_obsolete":false,"name":"elongated vegetative cell with central constriction","synonyms":[{"name":"cell morphology, elongated dumbbell","type":"related"},{"name":"cell morphology, long dumbbell","type":"related"},{"name":"elongated cell with central constriction during mitotic cell cycle","type":"related"},{"name":"elongated cell with central constriction during vegetative growth","type":"exact"},{"name":"elongated dumbbell morphology","type":"related"},{"name":"elongated dumbbell-shaped vegetative cell","type":"related"},{"name":"elongated swollen vegetative cell with constricted region at cell division site","type":"exact"}],"termid":"FYPO:0005115"}


id: MONDO:0009972
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"respiratory underresponsiveness to hypoxia and hypercapnia","secondary_identifiers":["OMIM:267480","MEDGEN:341453","UMLS:C1849430","MESH:C564848"],"synonyms":[{"name":"respiratory underresponsiveness to hypoxia and hypercapnia","type":"exact"}],"termid":"MONDO:0009972","xrefs":{"Monarch":{"xref_id":"0009972"}}}


id: PBO:0031445
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_double-strand_break_repair","termid":"PBO:0031445"}


id: PBO:0117147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSHR antisense RNA 1","termid":"PBO:0117147"}


id: MONDO:0016038
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare slow-growing benign neoplasm arising from the soft tissues in children. It is a poorly circumscribed tumor characterized by the presence of chondrocyte-like cells, nodular calcification, nuclear palisading, and in some cases osteoclastic giant cells.","definition_xrefs":["NCIT:C4818"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroma","termid":"MONDO:0005167"},{"relation_name":"is_a","term_name":"superficial Fibromatosis","termid":"MONDO:0016037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcified aponeurotic fibroma","secondary_identifiers":["SCTID:703614006","Orphanet:199260","MEDGEN:107818","UMLS:C0553647","GARD:20329"],"synonyms":[{"name":"Juvenile aponeurotic fibroma","type":"exact"},{"name":"Juvenile aponeurotic fibrosis","type":"exact"},{"name":"Keasby tumor","type":"exact"},{"name":"Keasby tumour","type":"exact"},{"name":"calcifying aponeurotic fibroma","type":"related"},{"name":"juvenile aponeurotic fibromatosis","type":"exact"}],"termid":"MONDO:0016038","xrefs":{"Monarch":{"xref_id":"0016038"}}}


id: FYPO:0001592
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of arginine into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased amino acid import during vegetative growth","termid":"FYPO:0001360"},{"relation_name":"is_a","term_name":"abnormal arginine import","termid":"FYPO:0001654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased arginine import","synonyms":[{"name":"decreased L-arginine import","type":"exact"},{"name":"decreased L-arginine import across plasma membrane","type":"exact"},{"name":"decreased arginine import during mitotic cell cycle","type":"related"},{"name":"decreased arginine import during vegetative growth","type":"exact"},{"name":"decreased arginine import into cell","type":"exact"},{"name":"decreased arginine uptake","type":"exact"},{"name":"reduced arginine import","type":"exact"}],"termid":"FYPO:0001592"}


id: PBO:0056074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphocyte antigen 6 family member G6D","termid":"PBO:0056074"}


id: PBO:0011525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, involved in diphthamide biosynthesis","termid":"PBO:0011525"}


id: PBO:0057060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 144","termid":"PBO:0057060"}


id: MONDO:0003948
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hemangioma arising from the cerebral hemisphere.","definition_xrefs":["NCIT:C5433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain hemangioma","termid":"MONDO:0003428"},{"relation_name":"is_a","term_name":"benign neoplasm of cerebrum","termid":"MONDO:0021497"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebral hemangioma","secondary_identifiers":["MEDGEN:164084","DOID:6621","UMLS:C0877388"],"synonyms":[{"name":"angioma of cerebral hemispheres","type":"exact"},{"name":"angioma of cerebrum","type":"exact"},{"name":"angioma of the cerebral hemispheres","type":"exact"},{"name":"angioma of the cerebrum","type":"exact"},{"name":"cerebral angioma","type":"exact"},{"name":"cerebral hemangioma","type":"exact"},{"name":"cerebral hemispheric angioma","type":"exact"},{"name":"cerebral hemispheric hemangioma","type":"exact"},{"name":"hemangioma of cerebral hemispheres","type":"exact"},{"name":"hemangioma of cerebrum","type":"exact"},{"name":"hemangioma of telencephalon","type":"exact"},{"name":"hemangioma of the cerebral hemispheres","type":"exact"},{"name":"hemangioma of the cerebrum","type":"exact"},{"name":"telencephalon hemangioma","type":"exact"}],"termid":"MONDO:0003948","xrefs":{"Monarch":{"xref_id":"0003948"}}}


id: GO:0000178
data:
  {"annotated_genes":["SJAG_04824","SJAG_03745","SJAG_01191","SJAG_00854","SJAG_01818","SJAG_01431","SJAG_04321","SJAG_04153","SJAG_04818","SJAG_04006","SJAG_03179","SJAG_01521","SJAG_04084"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[73060,74180,77985,79425,76063,76814,74946,73355,76328,117738],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000177"},{"annotations":[74179,76813,76327,75181,73059,74945,73354,77984,79424,102854,72356,117302,76062],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000176"}]},"cv_name":"cellular_component","definition":"A ribonuclease complex that has 3-prime to 5-prime exoribonuclease activity and possibly endoribonuclease activity, producing 5-prime-phosphomonoesters. Participates in a multitude of cellular RNA processing and degradation events preventing nuclear export and/or translation of aberrant RNAs. Restricted to processing linear and circular single-stranded RNAs (ssRNA) only. RNAs with complex secondary structures may have to be unwound or pre-processed by co-factors prior to entering the complex, esp if the 3-prime end is structured.","definition_xrefs":["PMID:26726035","PMID:17174896","PMID:20531386"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exoribonuclease complex","termid":"GO:1905354"},{"relation_name":"part_of","term_name":"intracellular anatomical structure","termid":"GO:0005622"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00854":null,"SJAG_01191":null,"SJAG_01431":null,"SJAG_01521":null,"SJAG_01818":null,"SJAG_03179":null,"SJAG_03745":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04321":null,"SJAG_04818":null,"SJAG_04824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"exosome (RNase complex)","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"exosome (ribonucleasease complex)","type":"exact"},{"name":"exosome multienzyme ribonuclease complex","type":"exact"}],"termid":"GO:0000178","terms_by_termid":{"GO:0000176":null,"GO:0000177":null}}


id: PBO:0028441
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_galactose_level_in_glycoprotein_glycan","termid":"PBO:0028441"}


id: GO:0050164
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-oxoglutarate + CoA + NADP+ = CO2 + NADPH + succinyl-CoA.","definition_xrefs":["GOC:rynl"],"gene_count":0,"genotype_count":0,"name":"obsolete oxoglutarate dehydrogenase (NADP+) activity (obsolete GO:0050164)","termid":"GO:0050164"}


id: MONDO:0004078
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An intrahepatic cholangiocarcinoma that produces abundant mucin.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrahepatic bile duct mucinous adenocarcinoma","termid":"MONDO:0002739"},{"relation_name":"is_a","term_name":"intrahepatic cholangiocarcinoma","termid":"MONDO:0003210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515","MONDO:0004992"],"is_obsolete":false,"name":"mucinous intrahepatic cholangiocarcinoma","secondary_identifiers":["UMLS:C1513718","MEDGEN:270842","NCIT:C41618","DOID:7024"],"synonyms":[{"name":"mucin-producing intrahepatic cholangiocarcinoma","type":"exact"},{"name":"mucinous intrahepatic cholangiocarcinoma","type":"exact"}],"termid":"MONDO:0004078","xrefs":{"Monarch":{"xref_id":"0004078"}}}


id: PBO:0049753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxycarboxylic acid receptor 3","termid":"PBO:0049753"}


id: GO:0140223
data:
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