# terms

id: PBO:0078251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 26/OR9-2 (pseudogene)","termid":"PBO:0078251"}


id: PBO:0062857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otopetrin 2","termid":"PBO:0062857"}


id: GO:0030688
data:
  {"annotated_genes":["SJAG_05187","SJAG_05186","SJAG_04339","SJAG_04611","SJAG_01338","SJAG_03654","SJAG_00897","SJAG_00838","SJAG_02250","SJAG_01618","SJAG_03458","SJAG_05018","SJAG_03539"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[67469,71068,71603,72092,73076,76361,80958,81073,108798,112910,114847],"is_not":false,"summary":null,"term":"GO:0030688"},{"annotations":[74558,80401],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030692"}]},"cv_name":"cellular_component","definition":"A preribosomal complex consisting of 20S pre-rRNA, ribosomal proteins including late-associating small subunit proteins, and associated proteins; a precursor of the eukaryotic cytoplasmic small ribosomal subunit.","definition_xrefs":["PMID:10567516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"preribosome","termid":"GO:0030684"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00838":null,"SJAG_00897":null,"SJAG_01338":null,"SJAG_01618":null,"SJAG_02250":null,"SJAG_03458":null,"SJAG_03539":null,"SJAG_03654":null,"SJAG_04339":null,"SJAG_04611":null,"SJAG_05018":null,"SJAG_05186":null,"SJAG_05187":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030684"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0030684","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"preribosome, small subunit precursor","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"43S preribosome","type":"narrow"}],"termid":"GO:0030688","terms_by_termid":{"GO:0030688":null,"GO:0030692":null}}


id: FYPO:0007744
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a short spindle assembles during the first meiotic nuclear division, and may begin elongation, but does not elongate normally or completely, and collapses during prophase I. Upon collapse the spindle may break or shrink.","definition_xrefs":["PMID:32723864","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle collapse during meiosis I","termid":"FYPO:0007103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"spindle collapse during meiotic prophase I","synonyms":[{"name":"broken meiotic spindle during prophase I","type":"related"},{"name":"meiotic spindle breakage during prophase I","type":"exact"},{"name":"spindle collapse during prophase I of meiotic cell cycle","type":"related"},{"name":"spindle collapse during prophase of meiosis I","type":"exact"}],"termid":"FYPO:0007744"}


id: GO:0052548
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endopeptidase activity, the endohydrolysis of peptide bonds within proteins.","definition_xrefs":["GOC:hjd","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of peptidase activity","termid":"GO:0052547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of endopeptidase activity","synonyms":[{"name":"protease regulator activity","type":"narrow"}],"termid":"GO:0052548"}


id: PBO:0091554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-alpha-hydroxytetrahydrobiopterin dehydratase","termid":"PBO:0091554"}


id: PBO:0071339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L28 pseudogene 3","termid":"PBO:0071339"}


id: PBO:0064270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology and RhoGEF domain containing G4","termid":"PBO:0064270"}


id: GO:0006495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jsg","GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete terminal O-glycosylation (obsolete GO:0006495)","synonyms":[{"name":"terminal O-glycosylation","type":"exact"}],"termid":"GO:0006495"}


id: GO:0060933
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a His-Purkinje cell over time, from its formation to the mature state. These cells form the fibers that regulate cardiac muscle contraction in the ventricles.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac cell development","termid":"GO:0055006"},{"relation_name":"part_of","term_name":"His-Purkinje system cell differentiation","termid":"GO:0060932"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"His-Purkinje system cell development","termid":"GO:0060933"}


id: PBO:0044659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defective in cullin neddylation 1 domain containing 2","termid":"PBO:0044659"}


id: PBO:0085886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; involved in invasive and pseudohyphal growth; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern","termid":"PBO:0085886"}


id: PBO:0057565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 760","termid":"PBO:0057565"}


id: MONDO:0007111
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"intracranial berry aneurysm","termid":"MONDO:0016483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aneurysm, intracranial berry type 1","secondary_identifiers":["DOID:0080964","UMLS:C1862932","MEDGEN:354864","OMIM:105800","GARD:18320","MESH:C566284"],"synonyms":[{"name":"ANIB1","type":"exact"},{"name":"aneurysm, intracranial berry, 1","type":"related"},{"name":"aneurysmal subarachnoid hemorrhage, familial","type":"related"}],"termid":"MONDO:0007111","xrefs":{"Monarch":{"xref_id":"0007111"}}}


id: PBO:0002684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylyl-sulfate kinase (predicted)","termid":"PBO:0002684"}


id: MONDO:0001646
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mild to moderate high blood pressure that is caused by an underlying medical condition.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary hypertension","termid":"MONDO:0001200"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign secondary hypertension","secondary_identifiers":["UMLS:C0155620","MEDGEN:57610","DOID:13143","ICD9:405.19","ICD9:405.1","SCTID:194785008"],"termid":"MONDO:0001646","xrefs":{"Monarch":{"xref_id":"0001646"}}}


id: GO:0102895
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 9(S)-HPODE = colneleate + H2O.","definition_xrefs":["EC:4.2.1.121","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"colneleate synthase activity","secondary_identifiers":["MetaCyc:RXN-8496","RHEA:28174"],"termid":"GO:0102895"}


id: MOD:01496
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an N'-hydrogen atom of a histidine residue with the Applied Biosystems iTRAQ4plex-115 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"iTRAQ4plex-115 reporter+balance reagent acylated residue","termid":"MOD:01492"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent N-acylated residue","termid":"MOD:01709"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ4plex-115 reporter+balance reagent N'-acylated histidine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"iTRAQ4plex115","type":"related"}],"termid":"MOD:01496"}


id: PBO:0041221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1GALT1 pseudogene 1","termid":"PBO:0041221"}


id: PBO:0073433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor 3b subunit 3","termid":"PBO:0073433"}


id: MOD:00421
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue hydrogen atom on a carbon with a carbohydrate-like group through a glycosidic bond.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylated residue","termid":"MOD:00693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"C-glycosylated residue","synonyms":[{"name":"CGlycoRes","type":"exact"}],"termid":"MOD:00421"}


id: GO:1902623
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of neutrophil migration.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:1826836"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte migration","termid":"GO:0002686"},{"relation_name":"is_a","term_name":"regulation of neutrophil migration","termid":"GO:1902622"},{"relation_name":"negatively_regulates","term_name":"neutrophil migration","termid":"GO:1990266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neutrophil migration","synonyms":[{"name":"down regulation of neutrophil migration","type":"exact"},{"name":"down-regulation of neutrophil migration","type":"exact"},{"name":"downregulation of neutrophil migration","type":"exact"},{"name":"inhibition of neutrophil migration","type":"narrow"}],"termid":"GO:1902623"}


id: GO:0005705
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A stretch of less tightly packed chromatin along the polytene chromosome, found between bands.","definition_xrefs":["PMID:11361342","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal region","termid":"GO:0098687"},{"relation_name":"part_of","term_name":"polytene chromosome","termid":"GO:0005700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005575","GO:0005694"],"is_obsolete":false,"name":"polytene chromosome interband","termid":"GO:0005705"}


id: FYPO:0001147
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A biological process phenotype in which the observed mating efficiency, as determined by counting zygotes, asci, and sometimes spores, is normal (i.e. the same as in wild-type cells).","definition_xrefs":["PomBase:mah","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000257"],"is_obsolete":false,"name":"normal mating efficiency","termid":"FYPO:0001147"}


id: SO:0000163
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Intronic 2 bp region bordering the exon, at the 5' edge of the intron. A splice_site that is downstream_adjacent_to exon and starts intron.","definition_xrefs":["SO:cjm","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cis_splice_site","termid":"SO:0001419"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_cis_splice_site","synonyms":[{"name":"5' splice site","type":"exact"},{"name":"donor","type":"related"},{"name":"donor splice site","type":"exact"},{"name":"five prime splice site","type":"exact"},{"name":"splice donor site","type":"exact"}],"termid":"SO:0000163"}


id: GO:1904730
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of intestinal lipid absorption.","definition_xrefs":["GOC:TermGenie","PMID:18768481","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intestinal absorption","termid":"GO:1904479"},{"relation_name":"is_a","term_name":"regulation of intestinal lipid absorption","termid":"GO:1904729"},{"relation_name":"negatively_regulates","term_name":"intestinal lipid absorption","termid":"GO:0098856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of intestinal lipid absorption","synonyms":[{"name":"down regulation of intestinal lipid absorption","type":"exact"},{"name":"down-regulation of intestinal lipid absorption","type":"exact"},{"name":"downregulation of intestinal lipid absorption","type":"exact"},{"name":"inhibition of intestinal lipid absorption","type":"narrow"}],"termid":"GO:1904730"}


id: GO:2000725
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiac muscle cell differentiation.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of striated muscle cell differentiation","termid":"GO:0051153"},{"relation_name":"is_a","term_name":"regulation of cardiocyte differentiation","termid":"GO:1905207"},{"relation_name":"regulates","term_name":"cardiac muscle cell differentiation","termid":"GO:0055007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac muscle cell differentiation","synonyms":[{"name":"regulation of cardiomyocyte differentiation","type":"exact"},{"name":"regulation of heart muscle cell differentiation","type":"related"}],"termid":"GO:2000725"}


id: FYPO:0000342
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of cellular respiration is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular respiration","termid":"FYPO:0000078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular respiration","synonyms":[{"name":"decreased cellular respiration during mitotic cell cycle","type":"related"},{"name":"decreased cellular respiration during vegetative growth","type":"exact"},{"name":"decreased respiration","type":"broad"},{"name":"decreased respiratory metabolism","type":"exact"},{"name":"reduced cellular respiration","type":"exact"},{"name":"respiratory metabolism: decreased","type":"related"}],"termid":"FYPO:0000342"}


id: MONDO:0056798
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease or disorder that involves the vermiform appendix.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"large intestine disorder","termid":"MONDO:0024634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"disorder of appendix","secondary_identifiers":["DOID:60000","EFO:0009542","ICD9:543.9","SCTID:18526009","UMLS:C0267613","MEDGEN:540821","ICD10CM:K35-K38"],"synonyms":[{"name":"appendiceal disease","type":"exact"},{"name":"appendix disease","type":"exact"},{"name":"disease of appendix","type":"exact"},{"name":"disease of vermiform appendix","type":"exact"},{"name":"disease or disorder of vermiform appendix","type":"exact"},{"name":"disorder of appendix","type":"exact"},{"name":"disorder of vermiform appendix","type":"exact"},{"name":"vermiform appendix disease","type":"exact"},{"name":"vermiform appendix disease or disorder","type":"exact"}],"termid":"MONDO:0056798","xrefs":{"Monarch":{"xref_id":"0056798"}}}


id: GO:1990713
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that negatively regulates apoptotic processes. In human, this anti-apoptotic complex is a homodimer of BIRC5 (survivin) and provides one survivin molecule to the chromosomal passenger complex (CPC).","definition_xrefs":["PMID:10949038","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"survivin complex","synonyms":[{"name":"Baculoviral IAP repeat-containing protein 5 complex","type":"exact"},{"name":"survivin homodimer complex","type":"narrow"}],"termid":"GO:1990713"}


id: PBO:0111895
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Atf-CREB subfamily","termid":"PBO:0111895"}


id: GO:0072463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of events in which information about whether spindle is correctly assembled and chromosomes are attached to the spindle is received and converted into a molecular signal, contributing to a meiotic spindle assembly checkpoint.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete detection of stimulus involved in meiotic spindle assembly checkpoint (obsolete GO:0072463)","synonyms":[{"name":"meiotic spindle assembly checkpoint sensor mechanism","type":"related"},{"name":"meiotic spindle assembly checkpoint sensor process","type":"related"},{"name":"sensing involved in meiotic spindle assembly checkpoint","type":"related"}],"termid":"GO:0072463"}


id: GO:0001308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process, which occurs as a dividing cell ages, leading to expression of genes that are typically not expressed due to silencing by regulatory proteins.","definition_xrefs":["PMID:12044934","GOC:jh"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of chromatin silencing involved in replicative cell aging (obsolete GO:0001308)","synonyms":[{"name":"loss of chromatin silencing during replicative cell ageing","type":"related"},{"name":"loss of chromatin silencing involved in replicative cell aging","type":"exact"}],"termid":"GO:0001308"}


id: PBO:0088952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF2406 family conserved fungal protein","termid":"PBO:0088952"}


id: PBO:0079893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome c reductase complex assembly factor 2","termid":"PBO:0079893"}


id: GO:0048820
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for a hair follicle to attain its fully functional state.","definition_xrefs":["GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hair cycle process","termid":"GO:0022405"},{"relation_name":"is_a","term_name":"anatomical structure maturation","termid":"GO:0071695"},{"relation_name":"part_of","term_name":"hair follicle development","termid":"GO:0001942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hair follicle maturation","termid":"GO:0048820"}


id: PBO:0090714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial tyrosine-tRNA ligase","termid":"PBO:0090714"}


id: MONDO:0015450
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare congenital abnormality of the heart characterized by the presence of three atria. The right or left atrium is divided into two parts by fibromuscular tissue or a membrane. It may be associated with other heart congenital abnormalities.","definition_xrefs":["NCIT:C84651"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital heart malformation","termid":"MONDO:0019512"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triatrial heart","secondary_identifiers":["NANDO:2200263","NORD:1007","ICD10CM:Q24.2","GARD:6194","NANDO:2100083","ICD9:746.82","Orphanet:1463","SCTID:55510008","UMLS:C0009995","MEDGEN:3238"],"synonyms":[{"name":"Cor Triatriatum","type":"exact"},{"name":"Cor triatriatum","type":"exact"}],"termid":"MONDO:0015450","xrefs":{"Monarch":{"xref_id":"0015450"}}}


id: GO:0140129
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A histone reader that recognizes a histone H3 acetylated at lysine 56.","definition_xrefs":["PMID:23798425"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3 reader activity","termid":"GO:0140006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0140566"}],"interesting_parent_ids":["GO:0030674","GO:0140566","GO:0003674","GO:0060090"],"is_obsolete":false,"name":"histone H3K56ac reader activity","termid":"GO:0140129"}


id: GO:0106094
data:
  {"annotated_genes":["SJAG_04558","SJAG_05196","SJAG_01538"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[114697],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034993"},{"annotations":[98529,104639],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990612"}]},"cv_name":"cellular_component","definition":"A nuclear membrane protein complex which connects the nuclear outer and inner membranes together, and links thereby links the nuclear lumen to cytoplasmic microtubules.","definition_xrefs":["GOC:vw","PMID:19225124"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear membrane protein complex","termid":"GO:0106083"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01538":null,"SJAG_04558":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"nuclear membrane microtubule tethering complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106094","terms_by_termid":{"GO:0034993":null,"GO:1990612":null}}


id: _global:has_output_o_product_of
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"This is the combination of the has_output relation with the gene_product_of relation.","definition_xrefs":["GOC:mtg_berkeley_2013"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_output_o_product_of","secondary_identifiers":["GOREL:0001029"],"termid":"_global:has_output_o_product_of"}


id: GO:0047786
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4,5alpha-dihydrocortisone + NADP+ = cortisone + H+ + NADPH.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cortisone alpha-reductase activity (obsolete GO:0047786)","synonyms":[{"name":"4,5alpha-dihydrocortisone:NADP+ delta4-oxidoreductase activity","type":"related"},{"name":"NADPH:Delta4-3-oxosteroid-5alpha-oxidoreductase activity","type":"related"},{"name":"cortisone a-reductase activity","type":"exact"},{"name":"cortisone delta4-5alpha-reductase activity","type":"related"},{"name":"delta4-3-ketosteroid reductase (5alpha)","type":"related"},{"name":"delta4-3-oxosteroid-5alpha-reductase","type":"related"},{"name":"delta4-5alpha-reductase activity","type":"related"},{"name":"microsomal steroid reductase (5alpha)","type":"related"}],"termid":"GO:0047786"}


id: MONDO:0010537
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A X-linked yndrome characterized by intellectual deficit, truncal obesity, characteristic facial features, hypogonadism, tapered fingers and short toes.","definition_xrefs":["Orphanet:127"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"excluded_subClassOf","term_name":"monogenic epilepsy","termid":"MONDO:0015653"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic genetic obesity (obsolete MONDO:0016565)","termid":"MONDO:0016565"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"excluded_subClassOf","term_name":"obsolete eyelids malposition disorder (obsolete MONDO:0020158)","termid":"MONDO:0020158"},{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Borjeson-Forssman-Lehmann syndrome","secondary_identifiers":["SCTID:21634003","NORD:866","MESH:C536575","OMIM:301900","UMLS:C0265339","DOID:0050681","GARD:936","MEDGEN:78557","ICD9:759.89"],"synonyms":[{"name":"BFLS","type":"exact"},{"name":"BORJ","type":"exact"},{"name":"Borjeson syndrome","type":"exact"},{"name":"Borjeson-FORSSMAN-Lehmann syndrome","type":"related"},{"name":"Borjeson-Forssman-Lehmann syndrome","type":"exact"},{"name":"Borjeson-Forssman-Lehmann syndrome, X-linked recessive","type":"exact"},{"name":"Börjeson-Forssman-Lehman Syndrome","type":"exact"},{"name":"MRXSBFL","type":"exact"},{"name":"intellectual deficiency-epilepsy-endocrine disorders syndrome","type":"exact"},{"name":"intellectual disability, X-linked, syndromic, Borjeson-Forssman-Lehmann type","type":"related"},{"name":"intellectual disability, epilepsy, and endocrine disorder","type":"exact"},{"name":"intellectual disability, epilepsy, and endocrine disorders","type":"related"},{"name":"intellectual disability-epilepsy-endocrine disorders syndrome","type":"exact"},{"name":"mental deficiency, epilepsy and endocrine disorders","type":"related"},{"name":"mental retardation, X-linked, syndromic, Borjeson-Forssman-Lehmann type","type":"related"},{"name":"mental retardation, epilepsy, and endocrine disorder","type":"exact"},{"name":"mental retardation, epilepsy, and endocrine disorders","type":"related"},{"name":"syndromic X-linked intellectual disability Borjeson-Forssman-Lehmann type","type":"exact"},{"name":"syndromic X-linked mental retardation Borjeson-Forssman-Lehmann type","type":"exact"}],"termid":"MONDO:0010537","xrefs":{"Monarch":{"xref_id":"0010537"}}}


id: PBO:0036288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-acylglycerol-3-phosphate O-acyltransferase Vps66 (predicted)","termid":"PBO:0036288"}


id: MONDO:0007745
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive inherited disorder characterized by unconjugated hyperbilirubinemia, resulting in harmless intermittent jaundice.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary hyperbilirubinemia","termid":"MONDO:0002408"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"Gilbert syndrome","secondary_identifiers":["OMIM:143500","MESH:D005878","Orphanet:357","DOID:2739","ICD10CM:E80.4","MEDGEN:4891","UMLS:C0017551","NCIT:C84729","SCTID:27503000","EFO:0005556","icd11.foundation:1947520963"],"synonyms":[{"name":"Gilbert disease","type":"exact"},{"name":"Gilbert syndrome","type":"exact"},{"name":"Gilbert's disease","type":"exact"},{"name":"Gilbert's syndrome","type":"exact"},{"name":"Gilbert-Meulengracht syndrome","type":"exact"},{"name":"constitutional hyperbilirubinemia","type":"exact"},{"name":"familial cholemia","type":"exact"},{"name":"hereditary nonhemolytic jaundice","type":"exact"},{"name":"hyperbilirubinemia 1","type":"related"},{"name":"hyperbilirubinemia type 1","type":"exact"},{"name":"hyperbilirubinemia, Arias type","type":"related"},{"name":"hyperbilirubinemia, Gilbert type","type":"related"}],"termid":"MONDO:0007745","xrefs":{"Monarch":{"xref_id":"0007745"}}}


id: MONDO:0010906
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any orofacial cleft in which the cause of the disease is a mutation in the BMP4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleft lip/palate","termid":"MONDO:0016044"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orofacial cleft 11","secondary_identifiers":["GARD:18303","DOID:0080404","OMIM:600625","MEDGEN:436944","UMLS:C2677434"],"synonyms":[{"name":"BMP4 orofacial cleft","type":"exact"},{"name":"OFC11","type":"related"},{"name":"cleft Lip, congenital Healed","type":"related"},{"name":"cleft lip with or without cleft palate, nonsyndromic, 11","type":"related"},{"name":"congenital Healed cleft lip","type":"related"},{"name":"orofacial cleft 11","type":"exact"},{"name":"orofacial cleft caused by mutation in BMP4","type":"exact"},{"name":"orofacial cleft type 11","type":"exact"}],"termid":"MONDO:0010906","xrefs":{"Monarch":{"xref_id":"0010906"}}}


id: MONDO:0030326
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial DNA depletion syndrome","termid":"MONDO:0018158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial dna depletion syndrome 16B (neuroophthalmic type)","secondary_identifiers":["UMLS:C5543632","OMIM:619425","MEDGEN:1780329","DOID:0070447"],"synonyms":[{"name":"MTDPS16B","type":"exact"},{"name":"mitochondrial dna depletion syndrome 16B (neuroophthalmic type)","type":"exact"}],"termid":"MONDO:0030326","xrefs":{"Monarch":{"xref_id":"0030326"}}}


id: PBO:0055323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2751","termid":"PBO:0055323"}


id: GO:0103111
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(pros)-phospho-L-histidyl-[protein] + N-acetyl-D-glucosamine(out) = L-histidyl-[protein] + N-acetyl-D-glucosamine 6-phosphate(in).","definition_xrefs":["RHEA:49240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"protein-N(pi)-phosphohistidine--N-acetyl-D-glucosamine phosphotransferase activity","secondary_identifiers":["EC:2.7.1.193"],"synonyms":[{"name":"D-glucosamine PTS permease activity","type":"exact"},{"name":"N-acetyl-D-glucosamine PTS permease activity","type":"exact"}],"termid":"GO:0103111"}


id: MONDO:0001698
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dermatophytosis that involves the deep dermal layers.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"tinea corporis","termid":"MONDO:0001461"},{"relation_name":"is_a","term_name":"dermatophytosis","termid":"MONDO:0004678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"tinea profunda","secondary_identifiers":["UMLS:C1279621","MEDGEN:702632","SCTID:214600002","DOID:13368"],"synonyms":[{"name":"Majocchi's granuloma","type":"related"},{"name":"deep seated dermatophytosis","type":"related"},{"name":"granuloma trichophyticum","type":"exact"}],"termid":"MONDO:0001698","xrefs":{"Monarch":{"xref_id":"0001698"}}}


id: PBO:0083648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Elongin C, conserved among eukaryotes; forms a complex with Cul3p that polyubiquitylates monoubiquitylated RNA polymerase II to trigger its proteolysis; plays a role in global genomic repair","termid":"PBO:0083648"}


id: PBO:0088304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"linear element protein Mug20","termid":"PBO:0088304"}


id: MONDO:0957556
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital pulmonary veins atresia or stenosis","termid":"MONDO:0017864"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital pulmonary vein atresia","secondary_identifiers":["Orphanet:99126","UMLS:C0344679","MEDGEN:576417"],"termid":"MONDO:0957556","xrefs":{"Monarch":{"xref_id":"0957556"}}}


id: MONDO:0007238
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Absence of one or both mammary glands.","definition_xrefs":["NCIT:C118459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isolated congenital breast hypoplasia/aplasia","termid":"MONDO:0015855"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amastia","secondary_identifiers":["MESH:C535565","SCTID:75474006"],"synonyms":[{"name":"BNAH1","type":"narrow"},{"name":"absent breasts and nipples","type":"related"},{"name":"amastia","type":"exact"},{"name":"amazia","type":"related"},{"name":"athelia","type":"related"},{"name":"breasts and/or nipples, aplasia or hypoplasia of, 1","type":"related"},{"name":"complete absence of breasts","type":"related"}],"termid":"MONDO:0007238","xrefs":{"Monarch":{"xref_id":"0007238"}}}


id: PBO:0040347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit f pseudogene 4","termid":"PBO:0040347"}


id: GO:0061736
data:
  {"annotated_genes":["SJAG_05289"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110402],"is_not":false,"summary":null,"term":"GO:0061736"}]},"cv_name":"biological_process","definition":"The membrane invagination process by which an autophagosomal membrane surrounds an object that will be degraded by macroautophagy.","definition_xrefs":["GOC:pad","GOC:PARL","GOC:autophagy","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane invagination","termid":"GO:0010324"},{"relation_name":"part_of","term_name":"autophagosome assembly","termid":"GO:0000045"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0061024","GO:0006914","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"engulfment of target by autophagosome","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061736","terms_by_termid":{"GO:0061736":null}}


id: GO:0070529
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of an amino group from L-tryptophan to an acceptor, usually a 2-oxo acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016769","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"L-tryptophan aminotransferase activity","termid":"GO:0070529"}


id: GO:0051238
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of binding or confining metal ions such that they are separated from other components of a biological system.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete sequestering of metal ion (obsolete GO:0051238)","synonyms":[{"name":"metal ion retention","type":"exact"},{"name":"metal ion sequestering","type":"exact"},{"name":"metal ion sequestration","type":"exact"},{"name":"metal ion storage","type":"exact"},{"name":"retention of metal ion","type":"exact"},{"name":"sequestration of metal ion","type":"exact"},{"name":"storage of metal ion","type":"exact"}],"termid":"GO:0051238"}


id: GO:1990720
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"One of two microtubules present in the axonemal central pair. It is distinguishable from the C1 axonemal microtubule (also called C1 tubule) by the presence of differing protein components of the projections.","definition_xrefs":["GOC:cilia","PMID:9295136","PMID:21586547"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axonemal microtubule","termid":"GO:0005879"},{"relation_name":"part_of","term_name":"axonemal central pair","termid":"GO:0097540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005575","GO:0015630","GO:0005737"],"is_obsolete":false,"name":"C2 axonemal microtubule","synonyms":[{"name":"C2 tubule","type":"broad"}],"termid":"GO:1990720"}


id: MONDO:0004478
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A recently recognized variant of chronic lymphocytic leukemia/small lymphocytic lymphoma (CLL/SLL) that lacks somatic hypermutations of the Immunoglobulin heavy chain (IGH) genes, implying pregerminal center B-cell origin. Microarray gene expression profiling studies have demonstrated the expression of ZAP-70 gene (Syk family tyrosine kinase) in this subset of CLL/CLL. Patients with this variant of CLL/SLL have an unfavorable prognosis compared to those with somatic hypermutations of the IGH genes, with a median survival of approximately 6-8 years.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic lymphocytic leukemia/small lymphocytic lymphoma","termid":"MONDO:0003864"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"pregerminal center chronic lymphocytic leukemia/small lymphocytic lymphoma","secondary_identifiers":["NCIT:C37204","MEDGEN:234146","DOID:8144","UMLS:C1333038"],"synonyms":[{"name":"CLL/SLL with unmutated IGVH","type":"exact"},{"name":"chronic lymphocytic leukemia/small lymphocytic lymphoma with unmutated Immunoglobulin heavy chain variable-region Gene","type":"exact"},{"name":"pregerminal center chronic lymphocytic leukemia/small lymphocytic lymphoma","type":"exact"}],"termid":"MONDO:0004478","xrefs":{"Monarch":{"xref_id":"0004478"}}}


id: GO:0021541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the ammon gyrus over time, from its formation to the mature structure. The ammon gyrus, often subdivided into the CA1 and CA3 regions, is one of the two interlocking gyri of the hippocampus that is rich in large pyramidal neurons.","definition_xrefs":["GOC:dgh","GOC:cls","ISBN:0838580343","GOC:jid","GO_REF:0000021","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"hippocampus development","termid":"GO:0021766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ammon gyrus development","synonyms":[{"name":"Ammon's horn development","type":"related"},{"name":"cornu ammonis development","type":"related"}],"termid":"GO:0021541"}


id: GO:0098857
data:
  {"annotated_genes":["SJAG_04714","SJAG_04620","SJAG_03536","SJAG_04001"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[105076,91148,120409,90259],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044853"}]},"cv_name":"cellular_component","definition":"A membrane region with a lipid composition that is distinct from that of the membrane regions that surround it.","definition_xrefs":["PMID:26253820","PMID:20044567"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane","termid":"GO:0016020"}],"gene_count":4,"genes_by_uniquename":{"SJAG_03536":null,"SJAG_04001":null,"SJAG_04620":null,"SJAG_04714":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"membrane microdomain","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0098857","terms_by_termid":{"GO:0044853":null}}


id: GO:0032436
data:
  {"annotated_genes":["SJAG_01210","SJAG_03048","SJAG_02723","SJAG_03699","SJAG_00071","SJAG_00642"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104205,108492,110738,113568,118938],"is_not":false,"summary":null,"term":"GO:0032436"},{"annotations":[90758],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905786"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of proteasomal ubiquitin-dependent protein catabolic process","termid":"GO:0032434"},{"relation_name":"is_a","term_name":"positive regulation of proteasomal protein catabolic process","termid":"GO:1901800"},{"relation_name":"is_a","term_name":"positive regulation of ubiquitin-dependent protein catabolic process","termid":"GO:2000060"},{"relation_name":"positively_regulates","term_name":"proteasome-mediated ubiquitin-dependent protein catabolic process","termid":"GO:0043161"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_00642":null,"SJAG_01210":null,"SJAG_02723":null,"SJAG_03048":null,"SJAG_03699":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0030163"},{"rel_name":"regulates","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"positive regulation of proteasomal ubiquitin-dependent protein catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of proteasomal ubiquitin-dependent protein catabolic process","type":"narrow"},{"name":"stimulation of proteasomal ubiquitin-dependent protein catabolic process","type":"narrow"},{"name":"up regulation of proteasomal ubiquitin-dependent protein catabolic process","type":"exact"},{"name":"up-regulation of proteasomal ubiquitin-dependent protein catabolic process","type":"exact"},{"name":"upregulation of proteasomal ubiquitin-dependent protein catabolic process","type":"exact"}],"termid":"GO:0032436","terms_by_termid":{"GO:0032436":null,"GO:1905786":null}}


id: GO:0014060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of epinephrine.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catecholamine secretion","termid":"GO:0050433"},{"relation_name":"regulates","term_name":"epinephrine secretion","termid":"GO:0048242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of epinephrine secretion","synonyms":[{"name":"regulation of adrenaline secretion","type":"exact"}],"termid":"GO:0014060"}


id: MONDO:0025453
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic respiratory disease caused by the visna-maedi virus. It was formerly believed to be identical with jaagsiekte (pulmonary adenomatosis, ovine) but is now recognized as a separate entity.","definition_xrefs":["MESH:D011021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sheep disease","termid":"MONDO:0024985"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pneumonia, progressive interstitial, of sheep","synonyms":[{"name":"Maedi","type":"related"},{"name":"progressive interstitial pneumonia of sheep","type":"related"}],"termid":"MONDO:0025453","xrefs":{"Monarch":{"xref_id":"0025453"}}}


id: GO:0006806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete insecticide resistance (obsolete GO:0006806)","synonyms":[{"name":"insecticide resistance","type":"exact"}],"termid":"GO:0006806"}


id: FYPO:0007403
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the anaphase-promoting complex (APC) is present for longer than normal. The APC normally forms in prometaphase and disassembles before anaphase; in mutants it may remain present during anaphase.","definition_xrefs":["PomBase:mah","PMID:24583014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein complex organization during vegetative growth","termid":"FYPO:0007402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"increased duration of anaphase-promoting complex presence","synonyms":[{"name":"APC present during mitotic anaphase","type":"narrow"},{"name":"increased duration of APC presence","type":"exact"},{"name":"increased duration of anaphase-promoting complex presence during mitotic cell cycle","type":"related"},{"name":"increased duration of anaphase-promoting complex presence during vegetative growth","type":"exact"},{"name":"increased persistence of anaphase-promoting complex","type":"related"}],"termid":"FYPO:0007403"}


id: GO:0006525
data:
  {"annotated_genes":["SJAG_00495","SJAG_00392","SJAG_01019","SJAG_00635","SJAG_03398","SJAG_00636","SJAG_00412","SJAG_01461","SJAG_00695","SJAG_01592","SJAG_04577","SJAG_00043"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104445,113762,99973,112316,80231,120267,72060,108353,112934],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042450"},{"annotations":[80147],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019544"},{"annotations":[80145,115062],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010121"},{"annotations":[77490],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033387"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving arginine, 2-amino-5-(carbamimidamido)pentanoic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-amino acid metabolic process","termid":"GO:1901605"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00043":null,"SJAG_00392":null,"SJAG_00412":null,"SJAG_00495":null,"SJAG_00635":null,"SJAG_00636":null,"SJAG_00695":null,"SJAG_01019":null,"SJAG_01461":null,"SJAG_01592":null,"SJAG_03398":null,"SJAG_04577":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"arginine metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Arginine"],"synonyms":[{"name":"arginine metabolism","type":"exact"}],"termid":"GO:0006525","terms_by_termid":{"GO:0010121":null,"GO:0019544":null,"GO:0033387":null,"GO:0042450":null}}


id: PBO:0081053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZCCHC10 pseudogene 1","termid":"PBO:0081053"}


id: PBO:0044988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAH-box helicase 40","termid":"PBO:0044988"}


id: GO:0042742
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response","termid":"GO:0006952"},{"relation_name":"is_a","term_name":"response to bacterium","termid":"GO:0009617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"defense response to bacterium","secondary_identifiers":["GO:0042830","GO:0009816"],"synonyms":[{"name":"antibacterial peptide activity","type":"related"},{"name":"defence response to bacteria","type":"exact"},{"name":"defence response to bacterium","type":"exact"},{"name":"defense response to bacteria","type":"exact"},{"name":"defense response to bacterium, incompatible interaction","type":"narrow"},{"name":"resistance response to pathogenic bacteria","type":"narrow"},{"name":"resistance response to pathogenic bacterium","type":"narrow"}],"termid":"GO:0042742"}


id: MONDO:0007195
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bifid nose","termid":"MONDO:0000110"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bifid nose, autosomal dominant","secondary_identifiers":["OMIM:109740","GARD:15044","UMLS:C2751431","MEDGEN:414016"],"synonyms":[{"name":"bifid nose, autosomal dominant","type":"exact"}],"termid":"MONDO:0007195","xrefs":{"Monarch":{"xref_id":"0007195"}}}


id: FYPO:0004616
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cytoplasmic microtubule depolymerization, i.e. the removal of tubulin dimers from a cytoplasmic microtubule, does not occur at the plus end of the microtubule at the cell tip. Normally, rapid depolymerization takes place when the growing plus end of the microtubule reaches the cell tip.","definition_xrefs":["PomBase:mah","GO:0070462","PMID:15772152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule depolymerization during vegetative growth","termid":"FYPO:0000902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000054","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abolished cytoplasmic microtubule depolymerization at plus end at cell tip","synonyms":[{"name":"abolished cytoplasmic microtubule depolymerisation at plus end at cell tip","type":"exact"},{"name":"abolished cytoplasmic microtubule depolymerization at plus end at cell end","type":"exact"},{"name":"abolished cytoplasmic microtubule depolymerization at plus end at cell tip during mitotic cell cycle","type":"related"},{"name":"abolished cytoplasmic microtubule depolymerization at plus end at cell tip during vegetative growth","type":"exact"},{"name":"abolished microtubule catastrophe at cell tip","type":"related"},{"name":"abolished microtubule plus end shrinkage at cell tip","type":"related"},{"name":"abolished plus-end specific microtubule depolymerization at cell tip","type":"exact"},{"name":"cytoplasmic microtubule depolymerization at plus end at cell tip abolished","type":"exact"}],"termid":"FYPO:0004616"}


id: GO:0030644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of chloride ions within a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular monoatomic anion homeostasis","termid":"GO:0030002"},{"relation_name":"is_a","term_name":"chloride ion homeostasis","termid":"GO:0055064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0098771","GO:0008150"],"is_obsolete":false,"name":"intracellular chloride ion homeostasis","synonyms":[{"name":"cellular chloride ion homeostasis","type":"exact"}],"termid":"GO:0030644"}


id: PBO:0000074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypothetical protein","termid":"PBO:0000074"}


id: MOD:00503
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to N-(cis-delta 5)-tetradecaenoylglycine.","definition_xrefs":["OMSSA:78","PubMed:11955008","PubMed:6436247","PubMed:7543369","PubMed:11955007","PubMed:1326520","RESID:AA0059#var","PubMed:1386601","Unimod:134#G"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"},{"relation_name":"is_a","term_name":"alpha-amino acylated residue","termid":"MOD:01696"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-(cis-delta 5)-tetradecaenoylglycine","synonyms":[{"name":"(cis-delta 5)-tetradecaenoyl","type":"related"},{"name":"Myristoleyl","type":"related"},{"name":"N-(C14:1 aliphatic acyl)glycine","type":"exact"},{"name":"myristoleylation (one double bond)","type":"exact"},{"name":"ntermpepmyristoyeylationg","type":"exact"}],"termid":"MOD:00503"}


id: GO:0010065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the primary meristem over time, from formation to the mature structure, as it occurs during plant embryogenesis. The primary meristem tissue is the protoderm, ground meristem and procambium.","definition_xrefs":["ISBN:0471245208","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic meristem development","termid":"GO:0048508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary meristem tissue development","synonyms":[{"name":"primary meristem histogenesis","type":"exact"}],"termid":"GO:0010065"}


id: GO:0004120
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: nucleoside cyclic phosphate + H2O = nucleoside phosphate. This reaction is the hydrolysis of bonds in a cyclic nucleotide.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete photoreceptor cyclic-nucleotide phosphodiesterase activity (obsolete GO:0004120)","termid":"GO:0004120"}


id: PBO:0004648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ChaC-like protein, predicted cation transport regulator","termid":"PBO:0004648"}


id: GO:0090159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sphingolipids that contributes to endoplasmic reticulum membrane organization.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphingolipid biosynthetic process","termid":"GO:0030148"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane organization","termid":"GO:0090158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0061024","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"sphingolipid biosynthesis involved in endoplasmic reticulum membrane organization","synonyms":[{"name":"sphingolipid biosynthesis involved in endoplasmic reticulum membrane organisation","type":"exact"}],"termid":"GO:0090159"}


id: PBO:0081033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZC3H12A divergent transcript","termid":"PBO:0081033"}


id: GO:0014707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the branchiomeric skeletal muscle over time, from its formation to the mature structure. The branchiomeric muscle is derived from cranial mesoderm and controls facial expression, pharyngeal and laryngeal function, operating the jaw. The muscle begins its development with the differentiation of the muscle cells and ends with the mature muscle. Branchiomeric muscles of mammals correspond to the gill musculature of fish.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle organ development","termid":"GO:0007517"},{"relation_name":"is_a","term_name":"skeletal muscle tissue development","termid":"GO:0007519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"branchiomeric skeletal muscle development","termid":"GO:0014707"}


id: FYPO:0007408
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin is abnormal at sites encoding polyadenylation signals.","definition_xrefs":["PomBase:mah","PMID:32499400"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin during vegetative growth","termid":"FYPO:0000452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein localization to chromatin at polyadenylation site","synonyms":[{"name":"abnormal protein localisation to chromatin at polyadenylation site","type":"exact"},{"name":"abnormal protein localization to chromatin at poly(A) site","type":"exact"},{"name":"abnormal protein localization to chromatin at polyadenylation site during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to chromatin at polyadenylation site during vegetative growth","type":"exact"}],"termid":"FYPO:0007408"}


id: SO:0001049
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An island that contains genes for integration/excision and the gene and site for the initiation of intercellular transfer by conjugation. It can be complemented for transfer by a conjugative transposon.","definition_xrefs":["Phigo:ariane"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genomic_island","termid":"SO:0000772"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defective_conjugative_transposon","synonyms":[{"name":"defective conjugative transposon","type":"exact"}],"termid":"SO:0001049"}


id: MONDO:0011076
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic skeletal muscle disease characterized by abnormal chimeric aggregates of desmin and other cytoskeletal proteins and granulofilamentous material at the ultrastructural level in muscle biopsies and variable clinical/ myopathological features, age of disease onset and rate of disease progression. Patients present with bilateral skeletal muscle weakness that starts in distal leg muscles and spreads proximally, sometimes involving trunk, neck flexors and facial muscles and often cardiomyopathy manifested by conduction blocks, arrhythmias, chronic heart failure, and sometimes tachyarrhythmia. Weakness eventually leads to wheelchair dependence. Respiratory insufficiency can be a major cause of disability and death, beginning with nocturnal hyperventilation with oxygen desaturation and progressing to daytime respiratory failure.","definition_xrefs":["Orphanet:98909"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"myopathy","termid":"MONDO:0005336"},{"relation_name":"excluded_subClassOf","term_name":"autosomal recessive limb-girdle muscular dystrophy","termid":"MONDO:0015152"},{"relation_name":"excluded_subClassOf","term_name":"autosomal dominant distal myopathy","termid":"MONDO:0016108"},{"relation_name":"excluded_subClassOf","term_name":"hereditary inclusion-body myopathy","termid":"MONDO:0016112"},{"relation_name":"excluded_subClassOf","term_name":"qualitative or quantitative defects of desmin","termid":"MONDO:0016187"},{"relation_name":"excluded_subClassOf","term_name":"familial restrictive cardiomyopathy","termid":"MONDO:0016340"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of desmin","termid":"MONDO:0016187"},{"relation_name":"is_a","term_name":"familial dilated cardiomyopathy","termid":"MONDO:0016333"},{"relation_name":"is_a","term_name":"myofibrillar myopathy","termid":"MONDO:0018943"},{"relation_name":"is_a","term_name":"hereditary neuromuscular disease","termid":"MONDO:0100546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320","MONDO:0005267"],"is_obsolete":false,"name":"myofibrillar myopathy 1","secondary_identifiers":["DOID:0110286","OMIM:615325","DOID:0080092","MEDGEN:330449","Orphanet:363543","OMIM:601419","UMLS:C1832370","GARD:16870"],"synonyms":[{"name":"CMD1F and LGMD1D","type":"related"},{"name":"CMD1F and LGMD1D, formerly","type":"related"},{"name":"DES autosomal recessive limb-girdle muscular dystrophy","type":"exact"},{"name":"DES myofibrillar myopathy (disease)","type":"exact"},{"name":"IBM1","type":"related"},{"name":"MFM1","type":"related"},{"name":"arrhythmogenic right ventricular cardiomyopathy 7","type":"related"},{"name":"arrhythmogenic right ventricular cardiomyopathy 7, formerly","type":"related"},{"name":"arrhythmogenic right ventricular dysplasia, familial, 7","type":"related"},{"name":"arrhythmogenic right ventricular dysplasia, familial, 7, formerly","type":"related"},{"name":"autosomal recessive limb-girdle muscular dystrophy caused by mutation in DES","type":"exact"},{"name":"autosomal recessive limb-girdle muscular dystrophy type 2R","type":"exact"},{"name":"cardiomyopathy, dilated, 1F and limb-girdle muscular dystrophy type 1D","type":"related"},{"name":"cardiomyopathy, dilated, 1F and limb-girdle muscular dystrophy type 1D, formerly","type":"related"},{"name":"cardiomyopathy, dilated, with conduction defect and muscular dystrophy","type":"related"},{"name":"desmin-related myofibrillar myopathy","type":"exact"},{"name":"desmin-related myopathy","type":"related"},{"name":"desmin-related myopathy with arrhythmogenic right ventricular cardiomyopathy","type":"related"},{"name":"desminopathy","type":"exact"},{"name":"desminopathy, primary","type":"related"},{"name":"inclusion body myopathy 1, autosomal dominant","type":"related"},{"name":"inclusion body myopathy 1, autosomal dominant, formerly","type":"related"},{"name":"myofibrillar myopathy (disease) caused by mutation in DES","type":"exact"},{"name":"myofibrillar myopathy 1","type":"exact"},{"name":"myofibrillar myopathy type 1","type":"exact"},{"name":"myofibrillar myopathy with arrhythmogenic right ventricular cardiomyopathy","type":"related"},{"name":"myopathy, myofibrillar, 1","type":"related"},{"name":"myopathy, myofibrillar, desmin-related","type":"related"},{"name":"myopathy, myofibrillar, type 1","type":"exact"}],"termid":"MONDO:0011076","xrefs":{"Monarch":{"xref_id":"0011076"}}}


id: PBO:0110362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJC9 pseudogene 1","termid":"PBO:0110362"}


id: PR:O94284
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A sulfide:quinone oxidoreductase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10632:SF0","PRO:DNx","OMA:SCHPO03338"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfide:quinone oxidoreductase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G5.06c","secondary_identifiers":["UniProtKB:O94284"],"synonyms":[{"name":"Spom972h-SQRDL","type":"exact"},{"name":"cadmium resistance protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"heavy metal tolerance protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94284"}


id: SO:0000696
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A short oligonucleotide sequence, of length on the order of 10's of bases; either single or double stranded.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent","termid":"SO:0000695"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligo","secondary_identifiers":["http://en.wikipedia.org/wiki/Oligonucleotide"],"synonyms":[{"name":"oligonucleotide","type":"exact"}],"termid":"SO:0000696"}


id: PBO:0052462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLF9 divergent transcript","termid":"PBO:0052462"}


id: PBO:0004328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-M (predicted)","termid":"PBO:0004328"}


id: FYPO:0005155
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of ergosta-5,7,22,24(28)-tetraen-3beta-ol measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular sterol level","termid":"FYPO:0002327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular ergosta-5,7,22,24(28)-tetraen-3beta-ol level","synonyms":[{"name":"increased cellular ergosta-5,7,22,24(28)-tetraen-3beta-ol level during mitotic cell cycle","type":"related"},{"name":"increased cellular ergosta-5,7,22,24(28)-tetraen-3beta-ol level during vegetative growth","type":"exact"},{"name":"increased ergosta-5,7,22,24(28)-tetraen-3beta-ol accumulation","type":"related"}],"termid":"FYPO:0005155"}


id: MOD:00902
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that modifies an L-arginine residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified L-arginine residue","synonyms":[{"name":"ModArg","type":"exact"}],"termid":"MOD:00902"}


id: MONDO:0009589
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mesomelic dwarfism-cleft palate-camptodactyly syndrome is characterized by mesomelic shortening and bowing of the limbs, camptodactyly, skin dimpling and cleft palate with retrognathia and mandibular hypoplasia. It has been described in a brother and sister born to consanguineous parents. Transmission is autosomal recessive.","definition_xrefs":["Orphanet:2631"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesomelic dwarfism-cleft palate-camptodactyly syndrome","secondary_identifiers":["MEDGEN:340833","OMIM:249710","UMLS:C1855273","GARD:3552","MESH:C565404","SCTID:715471007"],"synonyms":[{"name":"Reardon-Hall-Slaney syndrome","type":"exact"},{"name":"mesomelic dwarfism cleft palate camptodactyly","type":"related"},{"name":"mesomelic dysplasia, Kozlowski-Reardon type","type":"exact"},{"name":"mesomelic dysplasia, Reardon type","type":"exact"},{"name":"mesomelic limb shortening and bowing","type":"related"}],"termid":"MONDO:0009589","xrefs":{"Monarch":{"xref_id":"0009589"}}}


id: FYPO:0007288
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein galactosylation is normal (i.e. indistinguishable from wild type). Protein galactosylation is the addition of a galactose residue to a protein amino acid.","definition_xrefs":["PomBase:mah","GO:0042125"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein glycosylation during vegetative growth","termid":"FYPO:0001909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal protein galactosylation during vegetative growth","synonyms":[{"name":"normal protein galactosylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0007288"}


id: PBO:0067920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 222","termid":"PBO:0067920"}


id: PBO:0074226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC45A4 antisense RNA 1","termid":"PBO:0074226"}


id: GO:1903855
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of stress response to copper ion.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:kmv","PMID:23437011"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of stress response to copper ion","termid":"GO:1903853"},{"relation_name":"positively_regulates","term_name":"stress response to copper ion","termid":"GO:1990169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of stress response to copper ion","synonyms":[{"name":"activation of response to copper ion stress","type":"narrow"},{"name":"activation of response to copper toxicity","type":"related"},{"name":"activation of stress response to copper ion","type":"narrow"},{"name":"positive regulation of response to copper ion stress","type":"exact"},{"name":"positive regulation of response to copper toxicity","type":"related"},{"name":"up regulation of response to copper ion stress","type":"exact"},{"name":"up regulation of response to copper toxicity","type":"related"},{"name":"up regulation of stress response to copper ion","type":"exact"},{"name":"up-regulation of response to copper ion stress","type":"exact"},{"name":"up-regulation of response to copper toxicity","type":"related"},{"name":"up-regulation of stress response to copper ion","type":"exact"},{"name":"upregulation of response to copper ion stress","type":"exact"},{"name":"upregulation of response to copper toxicity","type":"related"},{"name":"upregulation of stress response to copper ion","type":"exact"}],"termid":"GO:1903855"}


id: GO:0050449
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-geranylgeranyl diphosphate = casbene + diphosphate.","definition_xrefs":["EC:4.2.3.8","RHEA:14901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene synthase activity","termid":"GO:0010333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"casbene synthase activity","secondary_identifiers":["MetaCyc:CASBENE-SYNTHASE-RXN","KEGG_REACTION:R02064"],"synonyms":[{"name":"casbene synthetase activity","type":"related"},{"name":"geranylgeranyl-diphosphate diphosphate-lyase (cyclizing)","type":"related"},{"name":"geranylgeranyl-diphosphate diphosphate-lyase (cyclizing, casbene-forming)","type":"related"}],"termid":"GO:0050449"}


id: GO:0052233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a higher concentration of environmental oxygen within a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive aerotaxis in other organism involved in symbiotic interaction (obsolete GO:0052233)","synonyms":[{"name":"positive aerotaxis in other organism during symbiotic interaction","type":"related"},{"name":"positive aerotaxis within other organism during symbiotic interaction","type":"exact"}],"termid":"GO:0052233"}


id: FYPO:0003301
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which ubiquitin-dependent protein degradation via the N-end rule pathway begins later than normal during one or both meiotic nuclear divisions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delayed onset of protein degradation during meiosis","termid":"FYPO:0006531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"delayed onset of protein degradation via N-end rule pathway during meiosis","synonyms":[{"name":"delayed onset of protein degradation via N-end rule pathway during meiotic nuclear division","type":"exact"},{"name":"delayed onset of ubiquitin-dependent protein breakdown via the N-end rule pathway during meiosis","type":"exact"},{"name":"delayed onset of ubiquitin-dependent protein catabolic process via the N-end rule pathway during meiosis","type":"exact"},{"name":"delayed onset of ubiquitin-dependent protein catabolism via the N-end rule pathway during meiosis","type":"exact"},{"name":"delayed onset of ubiquitin-dependent protein degradation via the N-end rule pathway during meiosis","type":"exact"},{"name":"delayed protein degradation via N-end rule pathway during meiosis","type":"exact"}],"termid":"FYPO:0003301"}


id: MOD:01489
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an N'-hydrogen atom of a histidine residue with the Applied Biosystems iTRAQ4plex-114 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"iTRAQ4plex-114 reporter+balance reagent acylated residue","termid":"MOD:01485"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent N-acylated residue","termid":"MOD:01709"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ4plex-114 reporter+balance reagent N'-acylated histidine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"iTRAQ4plex114","type":"related"}],"termid":"MOD:01489"}


id: PBO:0058669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6797","termid":"PBO:0058669"}


id: PBO:0045105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deleted in malignant brain tumors 1 like 1 (pseudogene)","termid":"PBO:0045105"}


id: PBO:0077333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 70","termid":"PBO:0077333"}


id: GO:1990935
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein involved in the process of removing sections of the primary RNA transcript to form the mature form of the RNA.","definition_xrefs":["PMID:11118435"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"splicing factor binding","termid":"GO:1990935"}


id: MONDO:0009068
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cytochrome-c oxidase deficiency disease (obsolete MONDO:0009068)","secondary_identifiers":["GARD:48","NORD:1030"],"synonyms":[{"name":"Cytochrome C Oxidase Deficiency","type":"exact"}],"termid":"MONDO:0009068","xrefs":{"Monarch":{"xref_id":"0009068"}}}


id: GO:0007636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The sudden, usually upward, movement off the ground or other surface through sudden muscular effort in the legs, following exposure to a chemical substance.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"jump response","termid":"GO:0007630"},{"relation_name":"is_a","term_name":"chemosensory behavior","termid":"GO:0007635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemosensory jump behavior","synonyms":[{"name":"chemosensory jump behaviour","type":"exact"},{"name":"jump response to chemical stimulus","type":"exact"}],"termid":"GO:0007636"}


id: PBO:0079169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocator protein 2","termid":"PBO:0079169"}


id: MONDO:0032643
data:
  {"annotated_genes":["SJAG_05277"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88044],"is_not":false,"summary":null,"term":"MONDO:0032643"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pontocerebellar hypoplasia","termid":"MONDO:0020135"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05277":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"pontocerebellar hypoplasia, type 12","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:618266","UMLS:C4748873","Orphanet:611256","GARD:18030","MEDGEN:1648343","DOID:0112327"],"synonyms":[{"name":"COASY-related pontocerebellar hypoplasia","type":"exact"},{"name":"PCH12","type":"exact"},{"name":"PONTOCEREBELLAR HYPOPLASIA, TYPE 12","type":"exact"}],"termid":"MONDO:0032643","terms_by_termid":{"MONDO:0032643":null},"xrefs":{"Monarch":{"xref_id":"0032643"}}}


id: PBO:0057798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3120","termid":"PBO:0057798"}


id: PBO:0028788
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_heterochromatin_assembly","termid":"PBO:0028788"}


id: GO:0070160
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell-cell junction that seals cells together in an epithelium in a way that prevents even small molecules from leaking from one side of the sheet to the other.","definition_xrefs":["ISBN:0815332181"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction","termid":"GO:0005911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"tight junction","secondary_identifiers":["Wikipedia:Tight_junction"],"synonyms":[{"name":"occluding cell junction","type":"exact"},{"name":"occluding junction","type":"exact"}],"termid":"GO:0070160"}


id: GO:0097381
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Stack of disc membranes located inside a photoreceptor outer segment, and containing densely packed molecules of photoreceptor proteins that traverse the lipid bilayer. Disc membranes arise as evaginations of the ciliary membrane during the development of the outer segment and may or may not remain contiguous with the ciliary membrane.","definition_xrefs":["PMID:7507907","PMID:19501669","PMID:6771304","PMID:2537204","GOC:pde","PMID:11826267","GOC:bj","GOC:krc","PMID:26574505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle membrane","termid":"GO:0031090"},{"relation_name":"part_of","term_name":"photoreceptor outer segment","termid":"GO:0001750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"photoreceptor disc membrane","termid":"GO:0097381"}


id: PBO:0001006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor (predicted)","termid":"PBO:0001006"}


id: PBO:0078763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase subunit 11-2 pseudogene 6","termid":"PBO:0078763"}


id: MONDO:0012430
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any dysequilibrium syndrome in which the cause of the disease is a mutation in the WDR81 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebellar ataxia, intellectual disability, and dysequilibrium","termid":"MONDO:0009133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0006025"],"is_obsolete":false,"name":"cerebellar ataxia, intellectual disability, and dysequilibrium syndrome 2","secondary_identifiers":["MEDGEN:412914","DOID:0070557","UMLS:C2750234","MESH:C567656","GARD:15473","OMIM:610185"],"synonyms":[{"name":"CAMRQ2","type":"related"},{"name":"WDR81 dysequilibrium syndrome","type":"exact"},{"name":"cerebellar ataxia and intellectual disability with or without quadrupedal locomotion 2","type":"related"},{"name":"cerebellar ataxia and mental retardation with or without quadrupedal locomotion 2","type":"related"},{"name":"cerebellar ataxia, intellectual disability, and dysequilibrium syndrome 2","type":"exact"},{"name":"cerebellar ataxia, intellectual disability, and dysequilibrium syndrome type 2","type":"exact"},{"name":"cerebellar ataxia, mental retardation, and dysequilibrium syndrome 2","type":"exact"},{"name":"cerebellar ataxia, mental retardation, and dysequilibrium syndrome type 2","type":"exact"},{"name":"dysequilibrium syndrome caused by mutation in WDR81","type":"exact"}],"termid":"MONDO:0012430","xrefs":{"Monarch":{"xref_id":"0012430"}}}


id: GO:1905204
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of connective tissue replacement.","definition_xrefs":["GOC:BHF","GO_REF:0000058","GOC:bc","GOC:BHF_miRNA","GOC:TermGenie","PMID:25590961"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of tissue remodeling","termid":"GO:0034104"},{"relation_name":"is_a","term_name":"regulation of connective tissue replacement","termid":"GO:1905203"},{"relation_name":"negatively_regulates","term_name":"connective tissue replacement","termid":"GO:0097709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of connective tissue replacement","synonyms":[{"name":"down regulation of connective tissue replacement","type":"exact"},{"name":"down-regulation of connective tissue replacement","type":"exact"},{"name":"downregulation of connective tissue replacement","type":"exact"},{"name":"inhibition of connective tissue replacement","type":"narrow"}],"termid":"GO:1905204"}


id: GO:0005534
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to aldohexose galactose (galacto-hexose), a common constituent of many oligo- and polysaccharides.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide binding","termid":"GO:0048029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"galactose binding","synonyms":[{"name":"galactose binding lectin","type":"related"}],"termid":"GO:0005534"}


id: PBO:0038590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA dehydrogenase family member 9","termid":"PBO:0038590"}


id: PBO:0072001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S7 pseudogene 3","termid":"PBO:0072001"}


id: MONDO:1012583
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any ametopodia that occurs in chickens with dominant inheritance.","definition_xrefs":["PMID:6055328"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"iatrogenic disease, non-human animal","termid":"MONDO:1011322"},{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ametapodia-1, chicken","secondary_identifiers":["OMIA:000035-9031"],"termid":"MONDO:1012583","xrefs":{"Monarch":{"xref_id":"1012583"}}}


id: MONDO:0850348
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A bladder carcinoma that is characterized as an undifferentiated neoplasm composed of primitive-appearing cells.","definition_xrefs":["DOID:0080902"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urinary bladder carcinoma","termid":"MONDO:0004986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"bladder small cell carcinoma","termid":"MONDO:0850348","xrefs":{"Monarch":{"xref_id":"0850348"}}}


id: GO:0034681
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An integrin complex that comprises one alpha11 subunit and one beta1 subunit.","definition_xrefs":["PMID:12297042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrin complex","termid":"GO:0008305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"integrin alpha11-beta1 complex","synonyms":[{"name":"ITGA11-ITGB1 complex","type":"narrow"},{"name":"alpha11-beta1 integrin complex","type":"exact"}],"termid":"GO:0034681"}


id: PBO:0085604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in clathrin-mediated endocytosis; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and the nucleus; YHR097C has a paralog, PAL1, that arose from the whole genome duplication","termid":"PBO:0085604"}


id: MONDO:0013023
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"orofacial cleft","termid":"MONDO:0000358"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orofacial cleft 12","secondary_identifiers":["MEDGEN:411596","UMLS:C2748505","MESH:C567548","OMIM:612858","DOID:0080405"],"synonyms":[{"name":"OFC12","type":"exact"},{"name":"cleft lip with or without cleft palate, nonsyndromic, 12","type":"related"},{"name":"orofacial cleft 12","type":"exact"}],"termid":"MONDO:0013023","xrefs":{"Monarch":{"xref_id":"0013023"}}}


id: PBO:0065191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA processing factor 3","termid":"PBO:0065191"}


id: PR:Q9P7S8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23G3.05c gene.","definition_xrefs":["UniProtKB:Q9P7S8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein rax1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23G3.05c","synonyms":[{"name":"Spom972h-SPAC23G3.05c","type":"exact"}],"termid":"PR:Q9P7S8"}


id: PBO:0067667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 846, pseudogene","termid":"PBO:0067667"}


id: GO:0019457
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-methionine into other compounds, including succinyl-CoA.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"succinyl-CoA metabolic process","termid":"GO:0006104"},{"relation_name":"is_a","term_name":"L-methionine catabolic process","termid":"GO:0009087"},{"relation_name":"is_a","term_name":"amide catabolic process","termid":"GO:0043605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0055086","GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"L-methionine catabolic process to succinyl-CoA","secondary_identifiers":["MetaCyc:METHIONINE-DEG1-PWY"],"synonyms":[{"name":"methionine breakdown to succinyl-CoA","type":"exact"},{"name":"methionine degradation to succinyl-CoA","type":"exact"}],"termid":"GO:0019457"}


id: PBO:0086947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Receptor protein involved in selective autophagy during starvation; specifically involved in the transport of cargo protein alpha-mannosidase (Ams1p); Atg19p paralog","termid":"PBO:0086947"}


id: PBO:0030278
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vegetative_cell_population_growth_rate","termid":"PBO:0030278"}


id: GO:2000383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ectoderm development.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"ectoderm development","termid":"GO:0007398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of ectoderm development","termid":"GO:2000383"}


id: FYPO:0001184
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of maltose alpha-glucosidase (also known as maltase) activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal alpha-glucosidase activity","termid":"FYPO:0001183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000707","FYPO:0000661","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"abnormal maltase activity","synonyms":[{"name":"abnormal maltose alpha-glucosidase activity","type":"exact"}],"termid":"FYPO:0001184"}


id: PBO:0002000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartic protease Sxa1","termid":"PBO:0002000"}


id: MONDO:0850154
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tongue cancer","termid":"MONDO:0004631"},{"relation_name":"is_a","term_name":"oral cavity carcinoma","termid":"MONDO:0044925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"tongue carcinoma","secondary_identifiers":["UMLS:C0558353","MEDGEN:154320","DOID:0080641","NCIT:C4824"],"termid":"MONDO:0850154","xrefs":{"Monarch":{"xref_id":"0850154"}}}


id: RO:0002158
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"two individual entities d1 and d2 stand in a shares_ancestor_with relation if and only if there exists some a such that d1 derived_by_descent_from a and d2 derived_by_descent_from a.","direct_ancestors":[{"relation_name":"is_a","term_name":"evolutionarily_related_to","termid":"RO:0002320"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shares_ancestor_with","termid":"RO:0002158"}


id: GO:0043601
data:
  {"annotated_genes":["SJAG_05239","SJAG_00272","SJAG_04877","SJAG_00863","SJAG_03722","SJAG_04994","SJAG_00814","SJAG_01010","SJAG_02627","SJAG_04150","SJAG_02182","SJAG_00729","SJAG_02172","SJAG_03855","SJAG_02818","SJAG_03780","SJAG_05197","SJAG_01698"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[114365],"is_not":false,"summary":null,"term":"GO:0043601"},{"annotations":[72132,76600,76987,74688],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005658"},{"annotations":[72734,76823,78622,104647],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043625"},{"annotations":[82029,78946,118108],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005662"},{"annotations":[79533,78214,70497,74390,114684,78848],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043599"}]},"cv_name":"cellular_component","definition":"A multi-component enzymatic machine at the nuclear replication fork, which mediates DNA replication. Includes DNA primase, one or more DNA polymerases, DNA helicases, and other proteins.","definition_xrefs":["GOC:mtg_sensu","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"replisome","termid":"GO:0030894"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear replication fork","termid":"GO:0043596"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00272":null,"SJAG_00729":null,"SJAG_00814":null,"SJAG_00863":null,"SJAG_01010":null,"SJAG_01698":null,"SJAG_02172":null,"SJAG_02182":null,"SJAG_02627":null,"SJAG_02818":null,"SJAG_03722":null,"SJAG_03780":null,"SJAG_03855":null,"SJAG_04150":null,"SJAG_04877":null,"SJAG_04994":null,"SJAG_05197":null,"SJAG_05239":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991","GO:0005694"],"is_obsolete":false,"name":"nuclear replisome","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0043601","terms_by_termid":{"GO:0005658":null,"GO:0005662":null,"GO:0043599":null,"GO:0043601":null,"GO:0043625":null}}


id: GO:0015337
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: Me2+(out) + H+(out) = Me2+(in) + H+(in). Me can be Mn2+ or Cu2+.","definition_xrefs":["TC:2.A.55.1.2"],"gene_count":0,"genotype_count":0,"name":"obsolete low affinity metal ion uptake transporter activity (obsolete GO:0015337)","synonyms":[{"name":"low affinity metal ion uptake transporter activity","type":"exact"}],"termid":"GO:0015337"}


id: GO:0006813
data:
  {"annotated_genes":["SJAG_02445","SJAG_04698","SJAG_03401","SJAG_04028","SJAG_02883","SJAG_01353","SJAG_04167","SJAG_04616"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96031],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140141"},{"annotations":[114202],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097623"},{"annotations":[73961,72407],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990573"},{"annotations":[57539,61812,81797,68804],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071805"}]},"cv_name":"biological_process","definition":"The directed movement of potassium ions (K+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion transport","termid":"GO:0030001"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01353":null,"SJAG_02445":null,"SJAG_02883":null,"SJAG_03401":null,"SJAG_04028":null,"SJAG_04167":null,"SJAG_04616":null,"SJAG_04698":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"potassium ion transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:0015458","GO:0071804"],"synonyms":[{"name":"K+ conductance","type":"related"},{"name":"cellular potassium ion transport","type":"exact"},{"name":"low voltage-dependent potassium channel auxiliary protein activity","type":"related"},{"name":"low voltage-gated potassium channel auxiliary protein activity","type":"related"},{"name":"potassium conductance","type":"narrow"},{"name":"potassium ion conductance","type":"narrow"},{"name":"potassium transport","type":"related"},{"name":"sodium/potassium transport","type":"broad"}],"termid":"GO:0006813","terms_by_termid":{"GO:0071805":null,"GO:0097623":null,"GO:0140141":null,"GO:1990573":null}}


id: PomGeneEx:0000021
data:
  {"annotation_feature_type":"gene","cv_name":"PomGeneExProt","definition":"A gene expression qualifier that indicates that a protein is present under a given set of conditions or at an indicated time.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"present","termid":"PomGeneEx:0000005"},{"relation_name":"is_a","term_name":"protein expression level","termid":"PomGeneEx:0000010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein present","synonyms":[{"name":"protein expression present","type":"exact"}],"termid":"PomGeneEx:0000021"}


id: PBO:0116860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosome-releasing factor 2, mitochondrial Gfm2/Mef2","termid":"PBO:0116860"}


id: PBO:0089369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino acid transporter family","termid":"PBO:0089369"}


id: MONDO:0016879
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndrome caused by partial chromosomal deletion","termid":"MONDO:0000761"},{"relation_name":"is_a","term_name":"chromosome 17 disorder","termid":"MONDO:0020583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial deletion of chromosome 17","secondary_identifiers":["GARD:20802","MEDGEN:1825963","Orphanet:261831","UMLS:C5679661"],"synonyms":[{"name":"partial deletion of chromosome type 17","type":"exact"},{"name":"partial monosomy of chromosome 17","type":"exact"}],"termid":"MONDO:0016879","xrefs":{"Monarch":{"xref_id":"0016879"}}}


id: PBO:0012601
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frataxin","termid":"PBO:0012601"}


id: PBO:0086126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for function of the Sit4p protein phosphatase; member of a family of similar proteins that form complexes with Sit4p, including Sap155p, Sap185p, and Sap190p; SAP4 has a paralog, SAP155, that arose from the whole genome duplication","termid":"PBO:0086126"}


id: PBO:0002974
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"K(m)=63 microM","termid":"PBO:0002974"}


id: PBO:0078454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor gamma variable 6 (pseudogene)","termid":"PBO:0078454"}


id: GO:2000669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of dendritic cell apoptotic process.","definition_xrefs":["GOC:obol","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte apoptotic process","termid":"GO:2000107"},{"relation_name":"is_a","term_name":"regulation of dendritic cell apoptotic process","termid":"GO:2000668"},{"relation_name":"negatively_regulates","term_name":"dendritic cell apoptotic process","termid":"GO:0097048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of dendritic cell apoptotic process","synonyms":[{"name":"negative regulation of dendritic cell apoptosis","type":"narrow"}],"termid":"GO:2000669"}


id: PBO:0011470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor, zf-fungal binuclear cluster type Klf1","termid":"PBO:0011470"}


id: GO:0097129
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of cyclin D2 and cyclin-dependent kinase 4 (CDK4). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.","definition_xrefs":["GOC:so","PMID:15935619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"cyclin D2-CDK4 complex","termid":"GO:0097129"}


id: PBO:0060545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAV2 antisense RNA 5","termid":"PBO:0060545"}


id: GO:0019856
data:
  {"annotated_genes":["SJAG_04354","SJAG_00964","SJAG_00779","SJAG_00444","SJAG_00392","SJAG_00694","SJAG_00197","SJAG_03164","SJAG_05024"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73645,75800,71715,75063,71475,73343,57867,89600],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006207"},{"annotations":[93789],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006223"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pyrimidine nucleobases, 1,3-diazine, organic nitrogenous bases.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase metabolic process","termid":"GO:0006206"},{"relation_name":"is_a","term_name":"nucleobase biosynthetic process","termid":"GO:0046112"},{"relation_name":"is_a","term_name":"pyrimidine-containing compound biosynthetic process","termid":"GO:0072528"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00197":null,"SJAG_00392":null,"SJAG_00444":null,"SJAG_00694":null,"SJAG_00779":null,"SJAG_00964":null,"SJAG_03164":null,"SJAG_04354":null,"SJAG_05024":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"pyrimidine nucleobase biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"pyrimidine base anabolism","type":"exact"},{"name":"pyrimidine base biosynthesis","type":"exact"},{"name":"pyrimidine base biosynthetic process","type":"exact"},{"name":"pyrimidine base formation","type":"exact"},{"name":"pyrimidine base synthesis","type":"exact"}],"termid":"GO:0019856","terms_by_termid":{"GO:0006207":null,"GO:0006223":null}}


id: MONDO:0002177
data:
  {"annotated_genes":["SJAG_04334","SJAG_03266","SJAG_04495"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88281,88280],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011236"},{"annotations":[88617],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011717"}]},"cv_name":"mondo","definition":"Abnormally high levels of insulin in the blood.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine pancreas disorder","termid":"MONDO:0001933"},{"relation_name":"is_a","term_name":"glucose metabolism disease","termid":"MONDO:0002908"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03266":null,"SJAG_04334":null,"SJAG_04495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005066"],"is_obsolete":false,"name":"hyperinsulinism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:43779","DOID:2018","ICD9:251.1","SCTID:83469008","MESH:D006946","UMLS:C0020459","HP:0000842"],"synonyms":[{"name":"hyperinsulinemia","type":"exact"},{"name":"hyperinsulinism","type":"exact"},{"name":"hyperinsulinism (disease)","type":"exact"}],"termid":"MONDO:0002177","terms_by_termid":{"MONDO:0011236":null,"MONDO:0011717":null},"xrefs":{"Monarch":{"xref_id":"0002177"}}}


id: MONDO:0017106
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cystic malformation of the posterior fossa","termid":"MONDO:0020134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"retrocerebellar cyst","secondary_identifiers":["UMLS:C1845370","Orphanet:269200","HP:0006951","MEDGEN:335172"],"synonyms":[{"name":"Retrocerebellar arachnoid cyst","type":"exact"},{"name":"Retrocerebellar cyst","type":"exact"},{"name":"retrocerebellar cyst (disease)","type":"exact"}],"termid":"MONDO:0017106","xrefs":{"Monarch":{"xref_id":"0017106"}}}


id: MONDO:0016652
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"2q31.1 microdeletion syndrome is a well-defined and clinically recognizable syndrome characterized by moderate to severe developmental delay, short stature, facial dysmorphism and variable limb defects.","definition_xrefs":["Orphanet:251014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 2","termid":"MONDO:0016901"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2q31.1 microdeletion syndrome","secondary_identifiers":["SCTID:716387004","GARD:20690","MEDGEN:899856","UMLS:C4274647"],"synonyms":[{"name":"Del(2)(q31.1)","type":"exact"},{"name":"monosomy 2q31.1","type":"exact"}],"termid":"MONDO:0016652","xrefs":{"Monarch":{"xref_id":"0016652"}}}


id: MONDO:0015353
data:
  {"annotated_genes":["SJAG_01352"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87104],"is_not":false,"summary":null,"term":"MONDO:0015353"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neuronopathy, distal hereditary motor, type 5","termid":"MONDO:0100350"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01352":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0000426","MONDO:0005244"],"is_obsolete":false,"name":"neuronopathy, distal hereditary motor, type 5A","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111204","GARD:18266","OMIM:600794"],"synonyms":[{"name":"HMN 5A","type":"exact"},{"name":"HMN5A","type":"exact"},{"name":"dHMN 5A","type":"exact"},{"name":"dHMN5","type":"broad"},{"name":"distal HMN V","type":"broad"},{"name":"distal hereditary motor neuropathy type V","type":"broad"},{"name":"distal spinal muscular atrophy type 5","type":"broad"},{"name":"neuronopathy, distal hereditary motor, type 5","type":"broad"},{"name":"neuronopathy, distal hereditary motor, type 5A","type":"exact"},{"name":"neuronopathy, distal hereditary motor, type VA","type":"exact"},{"name":"neuropathy, distal hereditary motor, type 5A","type":"exact"},{"name":"spinal muscular atrophy, distal, type 5","type":"broad"},{"name":"spinal muscular atrophy, distal, type 5A","type":"exact"},{"name":"spinal muscular atrophy, distal, with upper limb predominance","type":"exact"}],"termid":"MONDO:0015353","terms_by_termid":{"MONDO:0015353":null},"xrefs":{"Monarch":{"xref_id":"0015353"}}}


id: MONDO:0034991
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic disease characterized by the presence of multiple café-au-lait macules and elevated rates of sister chromatid exchange demonstrated on cytogenetic testing. Pre- and postnatal growth deficiency with short stature, microcephaly, mild developmental delay, cardiomyopathy, and symptomatic gastro-esophageal reflux have also been described, while malar rash is typically absent.","definition_xrefs":["Orphanet:508512"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intrauterine growth restriction-congenital multiple café-au-lait macules-increased sister chromatid exchange syndrome","secondary_identifiers":["MEDGEN:1799324","GARD:17949","UMLS:C5567901"],"termid":"MONDO:0034991","xrefs":{"Monarch":{"xref_id":"0034991"}}}


id: PBO:0062682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily A member 3 pseudogene","termid":"PBO:0062682"}


id: GO:0009223
data:
  {"annotated_genes":["SJAG_04487"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[81238],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046081"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a pyrimidine deoxyribonucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a deoxyribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleotide catabolic process","termid":"GO:0006244"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide metabolic process","termid":"GO:0009219"},{"relation_name":"is_a","term_name":"deoxyribonucleotide catabolic process","termid":"GO:0009264"},{"relation_name":"is_a","term_name":"deoxyribose phosphate catabolic process","termid":"GO:0046386"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04487":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"pyrimidine deoxyribonucleotide catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"pyrimidine deoxyribonucleotide breakdown","type":"exact"},{"name":"pyrimidine deoxyribonucleotide catabolism","type":"exact"},{"name":"pyrimidine deoxyribonucleotide degradation","type":"exact"}],"termid":"GO:0009223","terms_by_termid":{"GO:0046081":null}}


id: FYPO:0005648
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which sister kinetochores separate during the first meiotic nuclear division. Normally sister kinetochores remain together until meiosis II.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic chromosome segregation","termid":"FYPO:0000151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"sister kinetochore dissociation in meiotic metaphase I","synonyms":[{"name":"decreased meiosis I sister kinetochore fusion","type":"narrow"},{"name":"decreased meiotic sister kinetochore association in meiotic metaphase I","type":"exact"},{"name":"precocious centromeric dissociation during meiosis I","type":"exact"},{"name":"premature sister kinetochore separation during meiosis I","type":"exact"},{"name":"sister kinetochore separation during first meiotic nuclear division","type":"exact"},{"name":"sister kinetochore separation during meiosis I","type":"exact"},{"name":"split kinetochores during meiosis I","type":"related"}],"termid":"FYPO:0005648"}


id: PBO:0085488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Proliferating cell nuclear antigen (PCNA); functions as the sliding replication clamp for DNA polymerase delta; may function as a docking site for other proteins required for mitotic and meiotic chromosomal DNA replication and for DNA repair; PCNA ubiquitination at K164 plays a crucial role during Okazaki fragment processing","termid":"PBO:0085488"}


id: MONDO:0019067
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Steroid-sensitive nephrotic syndrome (SSNS) is a kidney disease defined by selective proteinuria, hypoalbuminaemia and, on renal biopsy, minimal changes without immunoglobulin deposits.","definition_xrefs":["Orphanet:69061"],"direct_ancestors":[{"relation_name":"is_a","term_name":"idiopathic nephrotic syndrome","termid":"MONDO:0018170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"idiopathic steroid-sensitive nephrotic syndrome","secondary_identifiers":["GARD:16678"],"termid":"MONDO:0019067","xrefs":{"Monarch":{"xref_id":"0019067"}}}


id: MONDO:0030607
data:
  {"annotated_genes":["SJAG_03543","SJAG_00302","SJAG_00335"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88909,88910,88911],"is_not":false,"summary":null,"term":"MONDO:0030607"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Bryant-Li-Bhoj neurodevelopmental syndrome","termid":"MONDO:0031200"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00302":null,"SJAG_00335":null,"SJAG_03543":null},"genotype_count":0,"is_obsolete":false,"name":"Bryant-Li-Bhoj neurodevelopmental syndrome 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:619721","UMLS:C5676906","MEDGEN:1811435"],"synonyms":[{"name":"BRYLIB2","type":"exact"}],"termid":"MONDO:0030607","terms_by_termid":{"MONDO:0030607":null},"xrefs":{"Monarch":{"xref_id":"0030607"}}}


id: PBO:0047637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP1A-SDCBP2 readthrough (NMD candidate)","termid":"PBO:0047637"}


id: PBO:0069317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 575, pseudogene","termid":"PBO:0069317"}


id: GO:1901609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of vesicle transport along microtubule.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intracellular transport","termid":"GO:0032387"},{"relation_name":"is_a","term_name":"regulation of vesicle transport along microtubule","termid":"GO:1901608"},{"relation_name":"negatively_regulates","term_name":"vesicle transport along microtubule","termid":"GO:0047496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of vesicle transport along microtubule","synonyms":[{"name":"down regulation of microtubule-based vesicle localization","type":"exact"},{"name":"down regulation of vesicle transport along microtubule","type":"exact"},{"name":"down-regulation of microtubule-based vesicle localization","type":"exact"},{"name":"down-regulation of vesicle transport along microtubule","type":"exact"},{"name":"downregulation of microtubule-based vesicle localization","type":"exact"},{"name":"downregulation of vesicle transport along microtubule","type":"exact"},{"name":"inhibition of microtubule-based vesicle localization","type":"exact"},{"name":"inhibition of vesicle transport along microtubule","type":"narrow"},{"name":"negative regulation of microtubule-based vesicle localization","type":"exact"}],"termid":"GO:1901609"}


id: PBO:0059985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 5","termid":"PBO:0059985"}


id: PBO:0069913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1205, pseudogene","termid":"PBO:0069913"}


id: PBO:0038344
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-co-occurs","termid":"PBO:0038344"}


id: MONDO:0012619
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0006025","MONDO:0037792"],"is_obsolete":false,"name":"intellectual disability, autosomal recessive 11","secondary_identifiers":["DOID:0081186","GARD:22546","UMLS:C1970193","OMIM:611097","MEDGEN:369677","MESH:C567012"],"synonyms":[{"name":"MRT11","type":"exact"},{"name":"intellectual disability, autosomal recessive 11","type":"exact"},{"name":"mental retardation, autosomal recessive 11","type":"related"},{"name":"mental retardation, autosomal recessive, 11","type":"exact"}],"termid":"MONDO:0012619","xrefs":{"Monarch":{"xref_id":"0012619"}}}


id: GO:1990919
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The binding activity of a molecule that brings together a proteasome complex and a nuclear inner membrane, to maintain the nuclear membrane localization of the proteasome.","definition_xrefs":["PMID:16096059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-membrane adaptor activity","termid":"GO:0043495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0060090","GO:0030674"],"is_obsolete":false,"name":"proteasome-nuclear membrane anchor activity","synonyms":[{"name":"nuclear membrane proteasome adaptor","type":"related"},{"name":"nuclear membrane proteasome anchor","type":"exact"},{"name":"nuclear membrane proteasome tether","type":"exact"},{"name":"nuclear membrane proteasome tether activity","type":"exact"},{"name":"nuclear membrane-proteasome anchor activity","type":"exact"},{"name":"nuclear membrane-proteasome tether activity","type":"exact"},{"name":"tethering factor for nuclear proteasome","type":"related"}],"termid":"GO:1990919"}


id: PBO:0077572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 277, pseudogene","termid":"PBO:0077572"}


id: PBO:0069356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 616, pseudogene","termid":"PBO:0069356"}


id: PBO:0036485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine specific carbamoyl-phosphate synthase subunit Arg5","termid":"PBO:0036485"}


id: GO:0075720
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a virus establishes a latent state within its host as an episome, where the viral genome remains silent in the cytoplasm or nucleus as a distinct genetic entity.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of viral latency","termid":"GO:0019043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of episomal latency","synonyms":[{"name":"establishment as a plasmid prophage","type":"narrow"},{"name":"establishment of plasmid latency","type":"exact"}],"termid":"GO:0075720"}


id: PBO:0074482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET and MYND domain containing 1","termid":"PBO:0074482"}


id: GO:1905080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cerebellar neuron development.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:26609159"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"negative regulation of neuron differentiation","termid":"GO:0045665"},{"relation_name":"is_a","term_name":"regulation of cerebellar neuron development","termid":"GO:1905079"},{"relation_name":"negatively_regulates","term_name":"cerebellar neuron development","termid":"GO:0098749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cerebellar neuron development","synonyms":[{"name":"down regulation of cerebellar neuron development","type":"exact"},{"name":"down-regulation of cerebellar neuron development","type":"exact"},{"name":"downregulation of cerebellar neuron development","type":"exact"},{"name":"inhibition of cerebellar neuron development","type":"narrow"}],"termid":"GO:1905080"}


id: MONDO:0017928
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"9p13 microdeletion syndrome is a rare chromosomal anomaly syndrome, resulting from a partial interstitial deletion of the short arm of chromosome 9, characterized by mild to moderate developmental delay, hand tremors, myoclonic jerks, attention deficit-hyperactivity disorder and a social personality. Patients also present bruxism, short stature and minor facial dysmorphic features (e.g., bilateral epicantic folds, broad, flat nasal bridge, anteverted nares, low-set ears micro/retro-gnathia).","definition_xrefs":["Orphanet:324313"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"chromosome 9p deletion syndrome","termid":"MONDO:0008013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"9p13 microdeletion syndrome","secondary_identifiers":["MEDGEN:1635922","GARD:21437","UMLS:C4707097","SCTID:764725008"],"synonyms":[{"name":"Del(9)(p13)","type":"exact"},{"name":"monosomy 9p13","type":"exact"}],"termid":"MONDO:0017928","xrefs":{"Monarch":{"xref_id":"0017928"}}}


id: GO:0002052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate of neuroblast proliferation.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of neurogenesis","termid":"GO:0050769"},{"relation_name":"is_a","term_name":"regulation of neuroblast proliferation","termid":"GO:1902692"},{"relation_name":"is_a","term_name":"positive regulation of neural precursor cell proliferation","termid":"GO:2000179"},{"relation_name":"positively_regulates","term_name":"neuroblast proliferation","termid":"GO:0007405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neuroblast proliferation","synonyms":[{"name":"activation of neuroblast proliferation","type":"narrow"},{"name":"stimulation of neuroblast proliferation","type":"narrow"},{"name":"up regulation of neuroblast proliferation","type":"exact"},{"name":"up-regulation of neuroblast proliferation","type":"exact"},{"name":"upregulation of neuroblast proliferation","type":"exact"}],"termid":"GO:0002052"}


id: PBO:0001331
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"essential function does not appear to reside in its role in the folding or retention of misfolded proteins","termid":"PBO:0001331"}


id: PBO:0000362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoesterase motif","termid":"PBO:0000362"}


id: PBO:0059220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maestro heat like repeat family member 2B","termid":"PBO:0059220"}


id: MONDO:0020506
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ovarioleukodystrophy (obsolete MONDO:0020506)","secondary_identifiers":["Orphanet:99853"],"termid":"MONDO:0020506","xrefs":{"Monarch":{"xref_id":"0020506"}}}


id: PBO:0054548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1948","termid":"PBO:0054548"}


id: MONDO:0600009
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, severe form of hypophosphatasia characterized by infantile rickets without elevated serum alkaline phosphatase (ALP) activity and a wide range of clinical manifestations due to hypomineralization. Individuals often present with these features in infancy or in the perinatal period.","definition_xrefs":["PMID:32973344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ALPL-related autosomal recessive hypophosphatasia","termid":"MONDO:0100609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0006025"],"is_obsolete":false,"name":"severe hypophosphatasia","termid":"MONDO:0600009","xrefs":{"Monarch":{"xref_id":"0600009"}}}


id: MONDO:0003769
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Gastritis resulting from herpes virus.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral gastritis","termid":"MONDO:0002270"},{"relation_name":"is_a","term_name":"Herpesviridae infectious disease","termid":"MONDO:0005794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"herpetic gastritis","secondary_identifiers":["NCIT:C27341","DOID:6102","UMLS:C1333996","MEDGEN:272714"],"synonyms":[{"name":"Herpesviridae caused viral gastritis","type":"exact"},{"name":"Herpesviridae viral gastritis","type":"exact"}],"termid":"MONDO:0003769","xrefs":{"Monarch":{"xref_id":"0003769"}}}


id: GO:0031080
data:
  {"annotated_genes":["SJAG_04148","SJAG_02424","SJAG_03299","SJAG_01374","SJAG_04017","SJAG_00471","SJAG_01293","SJAG_03907","SJAG_03986"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72139,73510,74537,74748,75491,75738,82162,90819,111705],"is_not":false,"summary":null,"term":"GO:0031080"}]},"cv_name":"cellular_component","definition":"A subcomplex of the nuclear pore complex (NPC) that forms the outer rings of the core scaffold, a lattice-like structure that gives the NPC its shape and strength. In S. cerevisiae, the two outer rings each contain multiple copies of the following proteins: Nup133p, Nup120p, Nup145Cp, Nup85p, Nup84p, Seh1p, and Sec13p. In vertebrates, the two outer rings each contain multiple copies of the following proteins: Nup133, Nup160, Nup96, Nup75, Nup107, Seh1, Sec13, Nup43, Nup37, and ALADIN. Components are arranged in 8-fold symmetrical 'spokes' around the central transport channel. A single 'spoke', can be isolated and is sometimes referred to as the Nup84 complex (S. cerevisiae) or the Nup107-160 complex (vertebrates).","definition_xrefs":["PMID:20947011","PMID:22419078","PMID:18046406","PMID:19524430","GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear pore","termid":"GO:0005643"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00471":null,"SJAG_01293":null,"SJAG_01374":null,"SJAG_02424":null,"SJAG_03299":null,"SJAG_03907":null,"SJAG_03986":null,"SJAG_04017":null,"SJAG_04148":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005643"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005643","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"nuclear pore outer ring","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"Nup107-120 complex","type":"exact"},{"name":"Nup107-160 complex","type":"exact"},{"name":"Nup84 complex","type":"exact"}],"termid":"GO:0031080","terms_by_termid":{"GO:0031080":null}}


id: MONDO:0003695
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An uncommon benign neoplasm of glandular epithelium characterized by the presence of clear or hobnail cells within a dense fibrous stroma.","definition_xrefs":["NCIT:C40085"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian benign neoplasm","termid":"MONDO:0000646"},{"relation_name":"is_a","term_name":"clear cell adenofibroma","termid":"MONDO:0003460"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian clear cell adenofibroma","secondary_identifiers":["DOID:5897","UMLS:C1518694","MEDGEN:309502"],"synonyms":[{"name":"clear cell adenofibroma of ovary","type":"exact"},{"name":"ovarian clear cell adenofibroma","type":"exact"},{"name":"ovary clear cell adenofibroma","type":"exact"}],"termid":"MONDO:0003695","xrefs":{"Monarch":{"xref_id":"0003695"}}}


id: PBO:0060947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear factor I B","termid":"PBO:0060947"}


id: PBO:0030487
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_malonic_acid_import","termid":"PBO:0030487"}


id: GO:0047883
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ethanolamine + H2O + O2 = glycolaldehyde + NH3 + H2O2.","definition_xrefs":["RHEA:18581"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aliphatic amine oxidase activity","termid":"GO:0052595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"ethanolamine oxidase activity","secondary_identifiers":["EC:1.4.3.8","MetaCyc:ETHANOLAMINE-OXIDASE-RXN"],"synonyms":[{"name":"ethanolamine:oxygen oxidoreductase (deaminating)","type":"related"}],"termid":"GO:0047883"}


id: PBO:0031025
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_concentration_of_P-factor_in_growth_medium","termid":"PBO:0031025"}


id: PBO:0071996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 pseudogene 25","termid":"PBO:0071996"}


id: GO:0006386
data:
  {"annotated_genes":["SJAG_00637","SJAG_03761","SJAG_02242","SJAG_03689"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57206,61875,101707,117851],"is_not":false,"summary":null,"term":"GO:0006386"}]},"cv_name":"biological_process","definition":"A transcription termination process that completes the production of a primary RNA polymerase II transcript. RNA polymerase III has an intrinsic ability to terminate transcription upon incorporation of at least 4 contiguous U residues.","definition_xrefs":["PMID:12944462","PMID:27371117","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription termination","termid":"GO:0006353"},{"relation_name":"part_of","term_name":"transcription by RNA polymerase III","termid":"GO:0006383"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00637":null,"SJAG_02242":null,"SJAG_03689":null,"SJAG_03761":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0006351","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"termination of RNA polymerase III transcription","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0019225","Reactome:R-HSA-73980"],"synonyms":[{"name":"RNA polymerase III transcription termination","type":"exact"},{"name":"RNA polymerase III transcription termination factor activity","type":"related"},{"name":"transcription termination from Pol III promoter","type":"exact"},{"name":"transcription termination from RNA polymerase III promoter","type":"exact"}],"termid":"GO:0006386","terms_by_termid":{"GO:0006386":null}}


id: GO:0000943
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex of the retrotransposon RNA genome, reverse transcriptase, integrase, and associated molecules required for reproduction and integration of the retrotransposon into the host genome; the main structural molecule of the nucleocapsid is often a gag protein homolog.","definition_xrefs":["PMID:10861903","GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"nucleus","termid":"GO:0005634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634"],"is_obsolete":false,"name":"retrotransposon nucleocapsid","secondary_identifiers":["Wikipedia:Virus-like_particle"],"synonyms":[{"name":"VLP","type":"exact"},{"name":"Virus-like particle","type":"exact"}],"termid":"GO:0000943"}


id: GO:0042655
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The initiation of the activity of the inactive enzyme JUN kinase kinase kinase (JNKKK) activity.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of JNKKK activity (obsolete GO:0042655)","synonyms":[{"name":"activation of JUN kinase kinase kinase activity","type":"exact"},{"name":"positive regulation of JUNKKK activity","type":"broad"}],"termid":"GO:0042655"}


id: PBO:0047069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM131B antisense RNA 2","termid":"PBO:0047069"}


id: GO:0120127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a starvation stimulus, deprivation of zinc ion.","definition_xrefs":["PMID:24024381","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to metal ion starvation","termid":"GO:0180055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to zinc ion starvation","termid":"GO:0120127"}


id: PBO:0054071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1419","termid":"PBO:0054071"}


id: MONDO:0001656
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An abnormal dilation of the esophagus not due to obstruction.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"esophageal disorder","termid":"MONDO:0003749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"megaesophagus","secondary_identifiers":["SCTID:70667005","NCIT:C34811","UMLS:C0025164","DOID:13186","MEDGEN:6286"],"termid":"MONDO:0001656","xrefs":{"Monarch":{"xref_id":"0001656"}}}


id: MONDO:0859363
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"spastic paraplegia 79A, autosomal dominant, with ataxia","secondary_identifiers":["DOID:0070455","UMLS:C5774300","MEDGEN:1824073","OMIM:620221"],"termid":"MONDO:0859363","xrefs":{"Monarch":{"xref_id":"0859363"}}}


id: GO:0055094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lipoprotein particle stimulus.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to endogenous stimulus","termid":"GO:0009719"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to lipoprotein particle","synonyms":[{"name":"response to lipoprotein particle stimulus","type":"exact"}],"termid":"GO:0055094"}


id: GO:0008285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of cell proliferation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"negatively_regulates","term_name":"cell population proliferation","termid":"GO:0008283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell population proliferation","synonyms":[{"name":"down regulation of cell proliferation","type":"exact"},{"name":"down-regulation of cell proliferation","type":"exact"},{"name":"downregulation of cell proliferation","type":"exact"},{"name":"inhibition of cell proliferation","type":"narrow"},{"name":"negative regulation of cell proliferation","type":"related"}],"termid":"GO:0008285"}


id: GO:0097131
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of cyclin D1 and cyclin-dependent kinase 6 (CDK6). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.","definition_xrefs":["PMID:15935619","GOC:so"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"cyclin D1-CDK6 complex","termid":"GO:0097131"}


id: MONDO:0007510
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Clouston syndrome (or hidrotic ectodermal dysplasia) is characterized by the clinical triad of nail dystrophy, alopecia, and palmoplantar hyperkeratosis.","definition_xrefs":["Orphanet:189"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diffuse palmoplantar keratoderma","termid":"MONDO:0017666"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Clouston syndrome","secondary_identifiers":["UMLS:C0162361","MEDGEN:56416","GARD:2056","OMIM:129500","SCTID:54209007","DOID:14693"],"synonyms":[{"name":"Clouston hidrotic ectodermal dysplasia","type":"related"},{"name":"Clouston syndrome","type":"exact"},{"name":"Clouston's hidrotic ectodermal dysplasia","type":"exact"},{"name":"Clouston's syndrome","type":"exact"},{"name":"ED2","type":"related"},{"name":"Patel Bixler syndrome","type":"related"},{"name":"alopecia, dysplastic nails, palmar and plantar hyperkeratosis","type":"related"},{"name":"autosomal dominant hidrotic ectodermal dysplasia","type":"related"},{"name":"ectodermal dysplasia 2, Clouston type","type":"related"},{"name":"ectodermal dysplasia, hidrotic","type":"related"},{"name":"ectodermal dysplasia, hidrotic, 2","type":"related"},{"name":"ectodermal dysplasia, hidrotic, 2, formerly","type":"related"},{"name":"ectodermal dysplasia, hidrotic, autosomal dominant","type":"related"},{"name":"hidrotic ectodermal dysplasia","type":"exact"},{"name":"hidrotic ectodermal dysplasia syndrome","type":"exact"},{"name":"hidrotic ectodermal dysplasia, autosomal dominant","type":"related"},{"name":"palmoplantar hyperkeratosis and alopecia","type":"related"}],"termid":"MONDO:0007510","xrefs":{"Monarch":{"xref_id":"0007510"}}}


id: PBO:0066940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 242","termid":"PBO:0066940"}


id: PBO:0069529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 798, pseudogene","termid":"PBO:0069529"}


id: PBO:0054781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2194","termid":"PBO:0054781"}


id: PBO:0059975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND3 pseudogene 20","termid":"PBO:0059975"}


id: PBO:0031836
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_RNA_localization_during_vegetative_growth","termid":"PBO:0031836"}


id: GO:0015043
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 Fe(III)-[leghemoglobin] + NAD(P)H = 2 Fe(II)-[leghemoglobin] + NAD(P)+ + H+.","definition_xrefs":["EC:1.6.2.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor","termid":"GO:0016653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"leghemoglobin reductase [NAD(P)H] activity","secondary_identifiers":["MetaCyc:LEGHEMOGLOBIN-REDUCTASE-RXN"],"synonyms":[{"name":"NAD(P)H:ferrileghemoglobin oxidoreductase activity","type":"related"},{"name":"ferric leghemoglobin reductase activity","type":"related"},{"name":"leghemoglobin reductase activity","type":"exact"}],"termid":"GO:0015043"}


id: GO:1905189
data:
  {"annotated_genes":["SJAG_00145"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96978],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905191"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of metaphase/anaphase transition of meiosis II.","definition_xrefs":["PMID:21389117","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metaphase/anaphase transition of meiotic cell cycle","termid":"GO:1902102"},{"relation_name":"regulates","term_name":"metaphase/anaphase transition of meiosis II","termid":"GO:1990950"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00145":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of metaphase/anaphase transition of meiosis II","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of meiosis II metaphase/anaphase transition","type":"exact"}],"termid":"GO:1905189","terms_by_termid":{"GO:1905191":null}}


id: PBO:0041555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 19 open reading frame 38","termid":"PBO:0041555"}


id: PBO:0043351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLPTM1 like","termid":"PBO:0043351"}


id: PBO:0110161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA wybutosine biosynthesis protein Tyw3","termid":"PBO:0110161"}


id: PBO:0035912
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_antisense_RNA_level_during_vegetative_growth","termid":"PBO:0035912"}


id: PBO:0076064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm tail PG-rich repeat containing 2","termid":"PBO:0076064"}


id: FYPO:0002104
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell has a normal shape and is viable.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell shape","termid":"FYPO:0001125"},{"relation_name":"is_a","term_name":"viable vegetative cell","termid":"FYPO:0001491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000004","FYPO:0000257"],"is_obsolete":false,"name":"viable vegetative cell with normal cell shape","synonyms":[{"name":"viable cell with normal cell shape during vegetative growth","type":"exact"},{"name":"viable vegetative cell with normal cell shape during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002104"}


id: MONDO:0013468
data:
  {"annotated_genes":["SJAG_02163"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88552],"is_not":false,"summary":null,"term":"MONDO:0013468"}]},"cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the DHDDS gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"},{"relation_name":"is_a","term_name":"DHDDS-related syndrome","termid":"MONDO:1010097"},{"relation_name":"is_a","term_name":"DHDDS-CDG","termid":"MONDO:1040054"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02163":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0004736","MONDO:0002320","MONDO:0005328","MONDO:0005066"],"is_obsolete":false,"name":"retinitis pigmentosa 59","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD10CM:H35.5","MEDGEN:462577","DOID:0110352","GARD:15724","OMIM:613861","UMLS:C3151227"],"synonyms":[{"name":"DHDDS retinitis pigmentosa","type":"exact"},{"name":"RP59","type":"exact"},{"name":"congenital disorder of glycosylation, type 1bb","type":"exact"},{"name":"congenital disorder of glycosylation, type Ibb","type":"related"},{"name":"retinitis pigmentosa 59","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in DHDDS","type":"exact"},{"name":"retinitis pigmentosa type 59","type":"exact"}],"termid":"MONDO:0013468","terms_by_termid":{"MONDO:0013468":null},"xrefs":{"Monarch":{"xref_id":"0013468"}}}


id: MONDO:0800297
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete neuronal ceroid lipofuscinosis, late infantile (obsolete MONDO:0800297)","termid":"MONDO:0800297","xrefs":{"Monarch":{"xref_id":"0800297"}}}


id: MONDO:0020728
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypouricemia, renal","termid":"MONDO:0968951"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"hypouricemia, renal 1","secondary_identifiers":["OMIM:220150","MEDGEN:141632","UMLS:C0473219"],"synonyms":[{"name":"Dalmatian hypouricemia","type":"related"},{"name":"RHUC1","type":"related"},{"name":"hypouricemia, renal, 1","type":"related"},{"name":"hypouricemia, renal, type 1","type":"related"},{"name":"renal hypouricemia","type":"related"}],"termid":"MONDO:0020728","xrefs":{"Monarch":{"xref_id":"0020728"}}}


id: PBO:0028002
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-lagging_mitotic_chromosomes,_with_complete_sister_chromatid_separation","termid":"PBO:0028002"}


id: PBO:0026719
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H2B_localization_to_chromatin_at_protein_coding_gene","termid":"PBO:0026719"}


id: GO:0040017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of locomotion of a cell or organism.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of locomotion","termid":"GO:0040012"},{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"positively_regulates","term_name":"locomotion","termid":"GO:0040011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of locomotion","synonyms":[{"name":"activation of locomotion","type":"narrow"},{"name":"stimulation of locomotion","type":"narrow"},{"name":"up regulation of locomotion","type":"exact"},{"name":"up-regulation of locomotion","type":"exact"},{"name":"upregulation of locomotion","type":"exact"}],"termid":"GO:0040017"}


id: GO:0060762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of branching involved in mammary gland duct morphogenesis.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of morphogenesis of a branching structure","termid":"GO:0060688"},{"relation_name":"is_a","term_name":"regulation of morphogenesis of an epithelium","termid":"GO:1905330"},{"relation_name":"is_a","term_name":"regulation of animal organ morphogenesis","termid":"GO:2000027"},{"relation_name":"regulates","term_name":"branching involved in mammary gland duct morphogenesis","termid":"GO:0060444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of branching involved in mammary gland duct morphogenesis","termid":"GO:0060762"}


id: PBO:0089317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-body associated protein Pby1","termid":"PBO:0089317"}


id: PBO:0074868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 52","termid":"PBO:0074868"}


id: PBO:0057415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548p","termid":"PBO:0057415"}


id: MOD:00002
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O3-glycosylserine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-glycosylated residue","termid":"MOD:00396"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"O-glycosyl-L-serine","synonyms":[{"name":"OGlycoSer","type":"exact"}],"termid":"MOD:00002"}


id: GO:0140731
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of production of amphiregulin.","definition_xrefs":["PMID:24463227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"amphiregulin production","termid":"GO:0140730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of amphiregulin production","synonyms":[{"name":"regulation of AREG production","type":"broad"}],"termid":"GO:0140731"}


id: PBO:0074323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small ArfGAP 1","termid":"PBO:0074323"}


id: GO:0180017
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Hydrolysis of a ubiquitin unit from a ubiquitinated protein linked via the Lys11 residue of ubiquitin.","definition_xrefs":["PMID:26412298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deubiquitinase activity","termid":"GO:0101005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0140096","GO:0008233","GO:0003674"],"is_obsolete":false,"name":"K11-linked deubiquitinase activity","termid":"GO:0180017"}


id: PBO:0068700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 81, pseudogene","termid":"PBO:0068700"}


id: MONDO:0017195
data:
  {"annotated_genes":["SJAG_01005"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88053],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009806"}]},"cv_name":"mondo","definition":"Bruck syndrome is characterized by the association of osteogenesis imperfecta and congenital joint contractures.","definition_xrefs":["Orphanet:2771"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with decreased bone density (obsolete MONDO:0019704)","termid":"MONDO:0019704"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01005":null},"genotype_count":0,"is_obsolete":false,"name":"Bruck syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:1029","ICD9:733.99","MEDGEN:609420","icd11.foundation:1783996418","MedDRA:10063718","DOID:0060231","SCTID:254113006","OMIMPS:259450","UMLS:C0432253"],"synonyms":[{"name":"osteogenesis imperfecta with congenital joint contractures","type":"exact"},{"name":"osteogenesis imperfecta-congenital joint contractures syndrome","type":"exact"}],"termid":"MONDO:0017195","terms_by_termid":{"MONDO:0009806":null},"xrefs":{"Monarch":{"xref_id":"0017195"}}}


id: PBO:0075662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spectrin beta, non-erythrocytic 2","termid":"PBO:0075662"}


id: MONDO:0022716
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Chiari malformation","termid":"MONDO:0000115"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chiari malformation type 4","secondary_identifiers":["MEDGEN:148203","SCTID:253187005","UMLS:C0750932"],"synonyms":[{"name":"Arnold Chiari malformation type IV","type":"related"},{"name":"Chiari malformation type IV","type":"related"},{"name":"Chiari type IV malformation","type":"related"}],"termid":"MONDO:0022716","xrefs":{"Monarch":{"xref_id":"0022716"}}}


id: GO:0048299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of isotype switching to IgD isotypes.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of isotype switching","termid":"GO:0045191"},{"relation_name":"regulates","term_name":"isotype switching to IgD isotypes","termid":"GO:0048292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0010467","GO:0006310"],"is_obsolete":false,"name":"regulation of isotype switching to IgD isotypes","synonyms":[{"name":"regulation of class switch recombination to IgD isotypes","type":"exact"},{"name":"regulation of class switching to IgD isotypes","type":"exact"},{"name":"regulation of isotype switch recombination to IgD isotypes","type":"exact"}],"termid":"GO:0048299"}


id: FYPO:0007117
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to leucine starvation is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"decreased RNA level during cellular response to leucine starvation","synonyms":[{"name":"decreased RNA accumulation during cellular response to leucine starvation","type":"related"},{"name":"decreased RNA level during cellular response to leucine depletion","type":"exact"},{"name":"decreased RNA level during cellular response to leucine deprivation","type":"exact"},{"name":"decreased RNA level during cellular response to leucine starvation during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to leucine starvation during vegetative growth","type":"exact"},{"name":"decreased RNA level during leucine starvation","type":"exact"},{"name":"decreased mRNA level during cellular response to leucine starvation","type":"narrow"},{"name":"decreased transcript level during cellular response to leucine starvation","type":"exact"},{"name":"reduced RNA level during cellular response to leucine starvation","type":"exact"}],"termid":"FYPO:0007117"}


id: MONDO:0002122
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neuropathy arising from inflammation of one or more nerves.","direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral neuropathy","termid":"MONDO:0005244"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"neuritis","secondary_identifiers":["MEDGEN:14344","UMLS:C0027813","ICD9:729.2","MESH:D009443","NCIT:C116381","DOID:1803","SCTID:128192007","SCTID:84299009"],"synonyms":[{"name":"nerve inflammation","type":"exact"},{"name":"peripheral neuritis","type":"exact"}],"termid":"MONDO:0002122","xrefs":{"Monarch":{"xref_id":"0002122"}}}


id: PBO:0029520
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_microcolony,_swollen_septated_spheroid_cells_(obsolete_FYPO:0002194)","termid":"PBO:0029520"}


id: GO:0018867
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving alpha-pinene, a monoterpene that may be a significant factor affecting bacterial activities in nature. It is a major component in tea-tree oils, and gives off a piney smelling odor.","definition_xrefs":["UM-BBD_pathwayID:apn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pinene metabolic process","termid":"GO:0033073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"alpha-pinene metabolic process","synonyms":[{"name":"alpha-pinene metabolism","type":"exact"}],"termid":"GO:0018867"}


id: PBO:0045402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPPA3 pseudogene 4","termid":"PBO:0045402"}


id: GO:0002329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a precursor cell type acquires the specialized features of a pre-B cell. Pre-B cells follow the pro-B cell stage of immature B cell differentiation and undergo rearrangement of heavy chain V, D, and J gene segments.","definition_xrefs":["GOC:jal","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immature B cell differentiation","termid":"GO:0002327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pre-B cell differentiation","synonyms":[{"name":"pre-B cell development","type":"related"},{"name":"pre-B lymphocyte differentiation","type":"exact"}],"termid":"GO:0002329"}


id: PBO:0089032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine salvage haloacid dehalogenase-like hydrolase Utr4","termid":"PBO:0089032"}


id: GO:1905898
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to endoplasmic reticulum stress.","definition_xrefs":["PMID:21803450","GOC:aruk","GOC:bc","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of response to endoplasmic reticulum stress","termid":"GO:1905897"},{"relation_name":"positively_regulates","term_name":"response to endoplasmic reticulum stress","termid":"GO:0034976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to endoplasmic reticulum stress","synonyms":[{"name":"activation of ER stress response","type":"narrow"},{"name":"activation of cellular response to endoplasmic reticulum stress","type":"narrow"},{"name":"activation of response to ER stress","type":"narrow"},{"name":"activation of response to endoplasmic reticulum stress","type":"narrow"},{"name":"positive regulation of ER stress response","type":"exact"},{"name":"positive regulation of cellular response to endoplasmic reticulum stress","type":"exact"},{"name":"positive regulation of response to ER stress","type":"exact"},{"name":"up regulation of ER stress response","type":"exact"},{"name":"up regulation of cellular response to endoplasmic reticulum stress","type":"exact"},{"name":"up regulation of response to ER stress","type":"exact"},{"name":"up regulation of response to endoplasmic reticulum stress","type":"exact"},{"name":"up-regulation of ER stress response","type":"exact"},{"name":"up-regulation of cellular response to endoplasmic reticulum stress","type":"exact"},{"name":"up-regulation of response to ER stress","type":"exact"},{"name":"up-regulation of response to endoplasmic reticulum stress","type":"exact"},{"name":"upregulation of ER stress response","type":"exact"},{"name":"upregulation of cellular response to endoplasmic reticulum stress","type":"exact"},{"name":"upregulation of response to ER stress","type":"exact"},{"name":"upregulation of response to endoplasmic reticulum stress","type":"exact"}],"termid":"GO:1905898"}


id: PBO:0064010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 44","termid":"PBO:0064010"}


id: PBO:0072581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RRN3 pseudogene 4","termid":"PBO:0072581"}


id: GO:0061480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an asparaginase stimulus.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to asparaginase","termid":"GO:0061480"}


id: PBO:0089321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase PP2A regulatory subunit, Zds1","termid":"PBO:0089321"}


id: MONDO:0019771
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Oromandibular dystonia (OMD) is a form of focal dystonia, affecting the lower part of the face and jaws. It is characterized by sustained or repetitive involuntary jaw and tongue movements and facial grimacing caused by involuntary spasms of the masticatory, facial, pharyngeal, lingual, and lip muscles.","definition_xrefs":["Orphanet:93958"],"direct_ancestors":[{"relation_name":"is_a","term_name":"focal dystonia","termid":"MONDO:0000477"},{"relation_name":"is_a","term_name":"focal, segmental or multifocal dystonia","termid":"MONDO:0015990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"oromandibular dystonia","secondary_identifiers":["icd11.foundation:749381409","MEDGEN:473560","GARD:19243","DOID:0050843","UMLS:C2242577"],"termid":"MONDO:0019771","xrefs":{"Monarch":{"xref_id":"0019771"}}}


id: GO:0031018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the endocrine pancreas over time, from its formation to the mature structure. The endocrine pancreas is made up of islet cells that produce insulin, glucagon and somatostatin.","definition_xrefs":["GOC:cvs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"pancreas development","termid":"GO:0031016"},{"relation_name":"part_of","term_name":"endocrine system development","termid":"GO:0035270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endocrine pancreas development","secondary_identifiers":["Reactome:R-HSA-186712"],"termid":"GO:0031018"}


id: PBO:0070393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAR related orphan receptor A","termid":"PBO:0070393"}


id: GO:0008065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment of the barrier between the perineurium of peripheral nerves and the vascular endothelium of endoneurial capillaries. The perineurium acts as a diffusion barrier, but ion permeability at the blood-nerve barrier is still higher than at the blood-brain barrier.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelial cell development","termid":"GO:0001885"},{"relation_name":"part_of","term_name":"peripheral nervous system development","termid":"GO:0007422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of blood-nerve barrier","synonyms":[{"name":"establishment of blood/nerve barrier","type":"exact"}],"termid":"GO:0008065"}


id: PBO:0047183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 201 member A","termid":"PBO:0047183"}


id: MONDO:0035426
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare disorder potentially indicated for transplant or complication after transplantation (obsolete MONDO:0035426)","secondary_identifiers":["Orphanet:565779"],"termid":"MONDO:0035426","xrefs":{"Monarch":{"xref_id":"0035426"}}}


id: PBO:0002367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved gene with no initiator methionine","termid":"PBO:0002367"}


id: MOD:01321
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other","definition_xrefs":["PubMed:12422359","PubMed:11510821","Unimod:176#C","PubMed:9448752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Michael addition of BHT quinone methide to cysteine and lysine","termid":"MOD:00534"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"Michael addition of BHT quinone methide to cysteine","synonyms":[{"name":"BHT","type":"related"},{"name":"Michael addition of BHT quinone methide to Cysteine and Lysine","type":"related"}],"termid":"MOD:01321"}


id: GO:0010583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cyclopentenone stimulus. Cyclopentenones are oxylipins derived from polyunsaturated fatty acids. They are structurally similar to jasmonic acid, but contain a reactive unsaturated carbonyl structure in the cyclo-ring. Cyclopentenones include phytoprostanes and 12-oxo-phytodienoic acid.","definition_xrefs":["PMID:18334669"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cyclopentenone","termid":"GO:0010583"}


id: PBO:0030109
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_methionine_import","termid":"PBO:0030109"}


id: PBO:0017464
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_gene_product","termid":"PBO:0017464"}


id: GO:0052097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a community of single-celled organisms of different species monitors population density by detecting the concentration of small diffusible signal molecules.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete interspecies quorum sensing (obsolete GO:0052097)","termid":"GO:0052097"}


id: GO:0030030
data:
  {"annotated_genes":["SJAG_01894","SJAG_02989","SJAG_02864","SJAG_02700","SJAG_01943","SJAG_04509","SJAG_00514","SJAG_01993","SJAG_03453","SJAG_02379","SJAG_01794"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90073,100102,100714,100795,116184,94327],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904600"},{"annotations":[91685,89709,92659,113220,95289],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1902917"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon.","definition_xrefs":["GOC:mah","PMID:16318917","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01794":null,"SJAG_01894":null,"SJAG_01943":null,"SJAG_01993":null,"SJAG_02379":null,"SJAG_02700":null,"SJAG_02864":null,"SJAG_02989":null,"SJAG_03453":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell projection organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cell projection organisation","type":"exact"},{"name":"cell projection organization and biogenesis","type":"related"},{"name":"cell surface structure organization and biogenesis","type":"related"}],"termid":"GO:0030030","terms_by_termid":{"GO:1902917":null,"GO:1904600":null}}


id: PBO:0061323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore complex interacting protein family member B1, pseudogene","termid":"PBO:0061323"}


id: PBO:0051825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon regulatory factor 2 binding protein 1","termid":"PBO:0051825"}


id: PBO:0005402
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.1.1.37","termid":"PBO:0005402"}


id: GO:0071487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a low light intensity stimulus. Low light intensity is defined as a level of electromagnetic radiation at or below 0.1 micromols/m2.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to low light intensity stimulus","termid":"GO:0009645"},{"relation_name":"is_a","term_name":"cellular response to light intensity","termid":"GO:0071484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to low light intensity stimulus","termid":"GO:0071487"}


id: PBO:0059267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRPL32 pseudogene 1","termid":"PBO:0059267"}


id: PBO:0064784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase, Mg2+/Mn2+ dependent 1E","termid":"PBO:0064784"}


id: PBO:0046081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4A1 pseudogene 6","termid":"PBO:0046081"}


id: GO:1904398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neuromuscular junction development.","definition_xrefs":["PMID:7722643","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of neuromuscular junction development","termid":"GO:1904396"},{"relation_name":"positively_regulates","term_name":"neuromuscular junction development","termid":"GO:0007528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neuromuscular junction development","synonyms":[{"name":"activation of NMJ stability","type":"related"},{"name":"activation of neuromuscular junction development","type":"narrow"},{"name":"activation of neuromuscular junction organization","type":"narrow"},{"name":"activation of neuromuscular junction stability","type":"related"},{"name":"positive regulation of NMJ stability","type":"related"},{"name":"positive regulation of neuromuscular junction organization","type":"exact"},{"name":"positive regulation of neuromuscular junction stability","type":"related"},{"name":"up regulation of NMJ stability","type":"related"},{"name":"up regulation of neuromuscular junction development","type":"exact"},{"name":"up regulation of neuromuscular junction organization","type":"exact"},{"name":"up regulation of neuromuscular junction stability","type":"related"},{"name":"up-regulation of NMJ stability","type":"related"},{"name":"up-regulation of neuromuscular junction development","type":"exact"},{"name":"up-regulation of neuromuscular junction organization","type":"exact"},{"name":"up-regulation of neuromuscular junction stability","type":"related"},{"name":"upregulation of NMJ stability","type":"related"},{"name":"upregulation of neuromuscular junction development","type":"exact"},{"name":"upregulation of neuromuscular junction organization","type":"exact"},{"name":"upregulation of neuromuscular junction stability","type":"related"}],"termid":"GO:1904398"}


id: GO:1900564
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving chanoclavine-I.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary alcohol metabolic process","termid":"GO:0034308"},{"relation_name":"is_a","term_name":"ergot alkaloid metabolic process","termid":"GO:0035836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"chanoclavine-I metabolic process","synonyms":[{"name":"chanoclavine-I metabolism","type":"exact"}],"termid":"GO:1900564"}


id: MONDO:0013858
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pontine tegmental cap dysplasia (PTCD) is a non-progressive neurological disorder characterized by significant developmental delay, cranial nerve dysfunction, and malformation of the hindbrain.Individuals with PTCD may have a collection of medical and developmental problems including: hearing impairment, ataxia,language and speech disorders, feeding and swallowingdifficulties, heartmalformations and facial paralysis.The severity of themedical problems varies among patients. Some patients have a good long-term prognosiswith normal intelligence and partial speech. The cause of PTCD has not been identified. Treatment is focused on managing the underlying symptoms and may include interventions such as cochlear implantation.","direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"pontine tegmental cap dysplasia","secondary_identifiers":["UMLS:C3541340","Orphanet:269229","MEDGEN:762040","GARD:10919","OMIM:614688"],"synonyms":[{"name":"PONTINE tegmental CAP dysplasia","type":"related"},{"name":"PTCD","type":"exact"},{"name":"pontine tegmental cap dysplasia","type":"exact"}],"termid":"MONDO:0013858","xrefs":{"Monarch":{"xref_id":"0013858"}}}


id: PBO:0086401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative endonuclease; has a domain similar to a magnesium-dependent endonuclease motif in mRNA deadenylase Ccr4p; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0086401"}


id: PBO:0028920
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_transcription_during_glucose_starvation_and_oxidative_stress","termid":"PBO:0028920"}


id: GO:1905639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitochondrial mRNA catabolic process.","definition_xrefs":["GOC:TermGenie","PMID:27122350","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mitochondrial RNA catabolic process","termid":"GO:0000962"},{"relation_name":"is_a","term_name":"positive regulation of mRNA catabolic process","termid":"GO:0061014"},{"relation_name":"is_a","term_name":"regulation of mitochondrial mRNA catabolic process","termid":"GO:1905637"},{"relation_name":"positively_regulates","term_name":"mitochondrial mRNA catabolic process","termid":"GO:0000958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0016071","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mitochondrial mRNA catabolic process","synonyms":[{"name":"activation of mitochondrial mRNA catabolic process","type":"narrow"},{"name":"up regulation of mitochondrial mRNA catabolic process","type":"exact"},{"name":"up-regulation of mitochondrial mRNA catabolic process","type":"exact"},{"name":"upregulation of mitochondrial mRNA catabolic process","type":"exact"}],"termid":"GO:1905639"}


id: PBO:0028984
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_alpha,alpha-trehalase_activity_during_cellular_response_to_nutrient","termid":"PBO:0028984"}


id: PBO:0048501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth differentiation factor 1","termid":"PBO:0048501"}


id: PBO:0085057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential protein of unknown function; required for transcriptional induction of the early meiotic-specific transcription factor IME1, also required for sporulation; contains twin cysteine-x9-cysteine motifs; deletion affects mitochondrial morphology","termid":"PBO:0085057"}


id: PBO:0079200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSPY like 4","termid":"PBO:0079200"}


id: GO:0009600
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus from a nematode is received and converted into a molecular signal.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of other organism","termid":"GO:0098543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of nematode","synonyms":[{"name":"perception of nematode","type":"related"}],"termid":"GO:0009600"}


id: MONDO:0024236
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A disorder characterized by the progressive loss of function and/or structure of the affected tissues.","definition_xrefs":["NCIT:C27090"],"gene_count":0,"genotype_count":0,"name":"obsolete degenerative disorder (obsolete MONDO:0024236)","secondary_identifiers":["ICD9:796.4","SCTID:362975008"],"synonyms":[{"name":"degenerative disease","type":"exact"},{"name":"degenerative disorder","type":"exact"}],"termid":"MONDO:0024236","xrefs":{"Monarch":{"xref_id":"0024236"}}}


id: PR:O42858
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A retinoblastoma-binding protein 5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01043","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"set1 complex component swd1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H3.05c","secondary_identifiers":["UniProtKB:O42858"],"synonyms":[{"name":"COMPASS component swd1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Set1C component swd1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-RBBP5","type":"exact"},{"name":"complex proteins associated with set1 protein swd1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42858"}


id: GO:0019700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of phosphonates, any organic compound containing one or more C-PO(OH)2 or C-PO(OR)2 (with R=alkyl, aryl) groups. Catabolism of phosphonic acid itself, an inorganic compound without the biochemically relevant C-P bond, is not included.","definition_xrefs":["GOC:js"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"organic phosphonate metabolic process","termid":"GO:0019634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"organic phosphonate catabolic process","synonyms":[{"name":"organophosphonate catabolic process","type":"related"},{"name":"phosphonate breakdown","type":"exact"},{"name":"phosphonate catabolism","type":"exact"},{"name":"phosphonate degradation","type":"exact"}],"termid":"GO:0019700"}


id: PBO:0069008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 252, pseudogene","termid":"PBO:0069008"}


id: MONDO:0044331
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An instance of transient congenital hypothyroidism that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"gene_count":0,"genotype_count":0,"name":"obsolete genetic transient congenital hypothyroidism (obsolete MONDO:0044331)","secondary_identifiers":["Orphanet:226316"],"synonyms":[{"name":"hereditary transient congenital hypothyroidism","type":"exact"}],"termid":"MONDO:0044331","xrefs":{"Monarch":{"xref_id":"0044331"}}}


id: GO:0072216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of metanephros development. Metanephros development is the process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is an organ that filters the blood and excretes the end products of body metabolism in the form of urine.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metanephros development","termid":"GO:0072215"},{"relation_name":"is_a","term_name":"positive regulation of kidney development","termid":"GO:0090184"},{"relation_name":"positively_regulates","term_name":"metanephros development","termid":"GO:0001656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of metanephros development","termid":"GO:0072216"}


id: PBO:0055813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipin 1","termid":"PBO:0055813"}


id: PBO:0039683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amyloid beta precursor protein binding family B member 1","termid":"PBO:0039683"}


id: PBO:0063778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHF5A pseudogene 5","termid":"PBO:0063778"}


id: GO:0071063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to receive sensory mechanical stimulus resulting from air flow, convert it to a molecular signal, and recognize and characterize the signal.","definition_xrefs":["PMID:19279637","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception of mechanical stimulus","termid":"GO:0050954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of wind","synonyms":[{"name":"perception of wind","type":"exact"},{"name":"sensory perception of air flow","type":"exact"}],"termid":"GO:0071063"}


id: GO:0031176
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of (1->4)-beta-D-xylosidic linkages in xylans.","definition_xrefs":["EC:3.2.1.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylanase activity","termid":"GO:0097599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"endo-1,4-beta-xylanase activity","secondary_identifiers":["MetaCyc:3.2.1.8-RXN"],"synonyms":[{"name":"1,4-beta-D-xylan xylanohydrolase activity","type":"related"},{"name":"1,4-beta-xylan xylanohydrolase activity","type":"related"},{"name":"beta-1,4-xylan xylanohydrolase activity","type":"related"},{"name":"beta-1,4-xylanase activity","type":"related"},{"name":"beta-D-xylanase activity","type":"related"},{"name":"beta-xylanase activity","type":"related"},{"name":"endo-(1,4)-beta-xylanase(1,4)-beta-xylan 4-xylanohydrolase activity","type":"related"},{"name":"endo-(1->4)-beta-xylanase(1->4)-beta-xylan 4-xylanohydrolase activity","type":"related"},{"name":"endo-1,4-beta-D-xylanase activity","type":"related"},{"name":"endo-1,4-xylanase activity","type":"related"},{"name":"endo-beta-1,4-xylanase activity","type":"related"},{"name":"xylanase","type":"broad"}],"termid":"GO:0031176"}


id: MONDO:0011705
data:
  {"annotated_genes":["SJAG_00289","SJAG_00991","SJAG_05346"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88734,88735,88736],"is_not":false,"summary":null,"term":"MONDO:0011705"}]},"cv_name":"mondo","definition":"A multifocal neoplasm with perivascular epithelioid cell differentiation affecting almost exclusively females of child-bearing age. It is characterized by the presence of smooth muscle and epithelioid cells and by the proliferation of lymphatic vessels. Sites of involvement include the lungs, mediastinum, and the retroperitoneum. It usually presents with chylous pleural effusion or ascites.","definition_xrefs":["NCIT:C3725"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm with perivascular epithelioid cell differentiation","termid":"MONDO:0006359"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00289":null,"SJAG_00991":null,"SJAG_05346":null},"genotype_count":0,"is_obsolete":false,"name":"lymphangioleiomyomatosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0751674","MESH:D018192","MEDGEN:148366","ICDO:9174/1","OMIM:606690","ICD10CM:J84.81","NANDO:1200430","icd11.foundation:902628446"],"synonyms":[{"name":"LAM","type":"related"},{"name":"lung lymphangioleiomyomatosis","type":"narrow"},{"name":"lymphangio-myomatosis","type":"related"},{"name":"lymphangioleiomyomatosis","type":"exact"},{"name":"lymphangioleiomyomatosis, somatic","type":"exact"},{"name":"lymphangiomyomatosis","type":"exact"},{"name":"pulmonary lymphangioleiomyomatosis","type":"narrow"}],"termid":"MONDO:0011705","terms_by_termid":{"MONDO:0011705":null},"xrefs":{"Monarch":{"xref_id":"0011705"}}}


id: PBO:0065001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PR/SET domain 7","termid":"PBO:0065001"}


id: PBO:0057764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 2053","termid":"PBO:0057764"}


id: PBO:0057326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 520a","termid":"PBO:0057326"}


id: PBO:0079588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2D3 antisense RNA 1","termid":"PBO:0079588"}


id: PBO:0081698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 620","termid":"PBO:0081698"}


id: PBO:0042755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein X","termid":"PBO:0042755"}


id: SO:0001589
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant which causes a disruption of the translational reading frame, because the number of nucleotides inserted or deleted is not a multiple of three.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein_altering_variant","termid":"SO:0001818"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frameshift_variant","secondary_identifiers":["http://snp.gs.washington.edu/SeattleSeqAnnotation137/HelpHowToUse.jsp","http://vat.gersteinlab.org/formats.php","http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences","loinc:LA6694-9","http://snpeff.sourceforge.net/SnpEff_manual.html"],"synonyms":[{"name":"ANNOVAR:frameshift block substitution","type":"related"},{"name":"ANNOVAR:frameshift substitution","type":"related"},{"name":"Jannovar:frameshift_variant","type":"exact"},{"name":"Seattleseq:frameshift","type":"exact"},{"name":"Seattleseq:frameshift-near-splice","type":"related"},{"name":"VAAST:frameshift_variant","type":"exact"},{"name":"VAT:deletionFS","type":"narrow"},{"name":"VAT:insertionFS","type":"narrow"},{"name":"VEP:frameshift_variant","type":"exact"},{"name":"frameshift variant","type":"exact"},{"name":"frameshift_","type":"exact"},{"name":"frameshift_coding","type":"exact"},{"name":"snpEff:FRAME_SHIFT","type":"exact"}],"termid":"SO:0001589"}


id: GO:1905524
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein autoubiquitination.","definition_xrefs":["GOC:PARL","GOC:bc","PMID:17237821","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein ubiquitination","termid":"GO:0031397"},{"relation_name":"is_a","term_name":"regulation of protein autoubiquitination","termid":"GO:1902498"},{"relation_name":"negatively_regulates","term_name":"protein autoubiquitination","termid":"GO:0051865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein autoubiquitination","synonyms":[{"name":"down regulation of protein auto-ubiquitination","type":"exact"},{"name":"down regulation of protein auto-ubiquitinylation","type":"exact"},{"name":"down regulation of protein autoubiquitination","type":"exact"},{"name":"down regulation of protein autoubiquitinylation","type":"exact"},{"name":"down regulation of protein self-ubiquitination","type":"exact"},{"name":"down regulation of protein self-ubiquitinylation","type":"exact"},{"name":"down-regulation of protein auto-ubiquitination","type":"exact"},{"name":"down-regulation of protein auto-ubiquitinylation","type":"exact"},{"name":"down-regulation of protein autoubiquitination","type":"exact"},{"name":"down-regulation of protein autoubiquitinylation","type":"exact"},{"name":"down-regulation of protein self-ubiquitination","type":"exact"},{"name":"down-regulation of protein self-ubiquitinylation","type":"exact"},{"name":"downregulation of protein auto-ubiquitination","type":"exact"},{"name":"downregulation of protein auto-ubiquitinylation","type":"exact"},{"name":"downregulation of protein autoubiquitination","type":"exact"},{"name":"downregulation of protein autoubiquitinylation","type":"exact"},{"name":"downregulation of protein self-ubiquitination","type":"exact"},{"name":"downregulation of protein self-ubiquitinylation","type":"exact"},{"name":"inhibition of protein auto-ubiquitination","type":"narrow"},{"name":"inhibition of protein auto-ubiquitinylation","type":"narrow"},{"name":"inhibition of protein autoubiquitination","type":"narrow"},{"name":"inhibition of protein autoubiquitinylation","type":"narrow"},{"name":"inhibition of protein self-ubiquitination","type":"narrow"},{"name":"inhibition of protein self-ubiquitinylation","type":"narrow"},{"name":"negative regulation of protein auto-ubiquitination","type":"exact"},{"name":"negative regulation of protein auto-ubiquitinylation","type":"exact"},{"name":"negative regulation of protein autoubiquitinylation","type":"exact"},{"name":"negative regulation of protein self-ubiquitination","type":"exact"},{"name":"negative regulation of protein self-ubiquitinylation","type":"exact"}],"termid":"GO:1905524"}


id: PBO:0062859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otoraplin","termid":"PBO:0062859"}


id: PBO:0067126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 172, pseudogene","termid":"PBO:0067126"}


id: SO:0000114
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A methylated deoxy-cytosine.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated_DNA_base_feature","termid":"SO:0000306"},{"relation_name":"is_a","term_name":"modified_cytosine","termid":"SO:0001963"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylated_cytosine","synonyms":[{"name":"methylated C","type":"exact"},{"name":"methylated cytosine","type":"exact"},{"name":"methylated cytosine base","type":"exact"},{"name":"methylated cytosine residue","type":"exact"},{"name":"methylated_C","type":"exact"}],"termid":"SO:0000114"}


id: PR:O74481
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pdi5 gene.","definition_xrefs":["UniProtKB:O74481","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1840.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1840.08c","synonyms":[{"name":"Spom972h-pdi5","type":"exact"}],"termid":"PR:O74481"}


id: PBO:0071041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 43","termid":"PBO:0071041"}


id: PBO:0059427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRTFA antisense RNA 1","termid":"PBO:0059427"}


id: GO:0110042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of nematode pharynx morphogenesis.","definition_xrefs":["PMID:20805556","GOC:rz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nematode pharynx morphogenesis","termid":"GO:0110041"},{"relation_name":"is_a","term_name":"negative regulation of animal organ morphogenesis","termid":"GO:0110111"},{"relation_name":"negatively_regulates","term_name":"nematode pharynx morphogenesis","termid":"GO:0110040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of nematode pharynx morphogenesis","termid":"GO:0110042"}


id: GO:0102601
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-amyrin + O2 + reduced [NADPH--hemoprotein reductase] = H+ + H2O + maniladiol + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["EC:1.14.14.63"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"beta-amyrin 16beta-monooxygenase activity","secondary_identifiers":["MetaCyc:RXN-15385"],"synonyms":[{"name":"cytochrome P450 dependent beta-amyrin 16beta-hydroxylase activity","type":"exact"}],"termid":"GO:0102601"}


id: MONDO:0021451
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the brain.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system organ benign neoplasm","termid":"MONDO:0000628"},{"relation_name":"is_a","term_name":"brain neoplasm","termid":"MONDO:0021211"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of brain","secondary_identifiers":["EFO:1000107","ICD9:225.0","SCTID:92030004","UMLS:C0496899","MEDGEN:99225","NCIT:C4781"],"synonyms":[{"name":"benign brain neoplasm","type":"exact"},{"name":"benign brain tumor","type":"exact"},{"name":"benign brain tumour","type":"exact"},{"name":"benign neoplasm of the brain","type":"exact"},{"name":"benign tumor of brain","type":"exact"},{"name":"benign tumor of the brain","type":"exact"},{"name":"benign tumour of brain","type":"exact"},{"name":"benign tumour of the brain","type":"exact"},{"name":"brain benign neoplasm","type":"exact"},{"name":"brain neoplasms, benign","type":"exact"}],"termid":"MONDO:0021451","xrefs":{"Monarch":{"xref_id":"0021451"}}}


id: GO:0002607
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of myeloid dendritic cell antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of dendritic cell antigen processing and presentation","termid":"GO:0002604"},{"relation_name":"regulates","term_name":"myeloid dendritic cell antigen processing and presentation","termid":"GO:0002469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of myeloid dendritic cell antigen processing and presentation","termid":"GO:0002607"}


id: PBO:0071022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 24","termid":"PBO:0071022"}


id: MONDO:0013516
data:
  {"annotated_genes":["SJAG_00643"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87249],"is_not":false,"summary":null,"term":"MONDO:0013516"}]},"cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the PRPF6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00643":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736","MONDO:0005328"],"is_obsolete":false,"name":"retinitis pigmentosa 60","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:15738","MEDGEN:462784","UMLS:C3151434","ICD10CM:H35.5","OMIM:613983","DOID:0110411"],"synonyms":[{"name":"PRPF6 retinitis pigmentosa","type":"exact"},{"name":"RP60","type":"exact"},{"name":"retinitis pigmentosa 60","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in PRPF6","type":"exact"},{"name":"retinitis pigmentosa type 60","type":"exact"}],"termid":"MONDO:0013516","terms_by_termid":{"MONDO:0013516":null},"xrefs":{"Monarch":{"xref_id":"0013516"}}}


id: GO:0040003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Synthesis and deposition of a chitin-based noncellular, hardened, or membranous secretion from an epithelial sheet. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cuticle development","termid":"GO:0042335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chitin-based cuticle development","synonyms":[{"name":"chitin-based cuticle anabolism","type":"exact"},{"name":"chitin-based cuticle biosynthetic process","type":"exact"},{"name":"chitin-based cuticle formation","type":"exact"},{"name":"chitin-based cuticle synthesis","type":"exact"}],"termid":"GO:0040003"}


id: GO:0062073
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-containing complex composed of a stem-loop binding protein (in most species SLBP) and its interacting partner (SLIP1 or MIF4GD in most species) that binds to the histone mRNA (hmRNA) 3-prime-stem-loop structure. Facilitates hmRNA translation initiation and may also be involved in its processing and nuclear export.","definition_xrefs":["GOC:bhm","PMID:18025107","PMID:23286197"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"histone mRNA stem-loop binding complex","synonyms":[{"name":"SLBP-MIF4GD complex","type":"narrow"},{"name":"SLBP-SLIP1 complex","type":"narrow"}],"termid":"GO:0062073"}


id: PBO:0028569
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_nucleotide-excision_repair_during_cellular_response_to_UV","termid":"PBO:0028569"}


id: PATO:0000559
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000559 absolute size value (obsolete PATO:0000559)","termid":"PATO:0000559"}


id: PBO:0040611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAIAP2 divergent transcript","termid":"PBO:0040611"}


id: GO:0007209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A phospholipase C-activating receptor G protein-coupled receptor signaling pathway initiated by tachykinin binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","GOC:mah","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase C-activating G protein-coupled receptor signaling pathway","termid":"GO:0007200"},{"relation_name":"is_a","term_name":"tachykinin receptor signaling pathway","termid":"GO:0007217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"phospholipase C-activating tachykinin receptor signaling pathway","synonyms":[{"name":"activation of phospholipase C activity by tachykinin receptor signaling pathway","type":"related"},{"name":"activation of phospholipase C activity by tachykinin receptor signalling pathway","type":"related"},{"name":"tachykinin receptor, phospholipase C activating pathway","type":"related"}],"termid":"GO:0007209"}


id: GO:0016707
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a gibberellin + 2-oxoglutarate + O2 = a 3-beta-hydroxy-gibberellin + succinate + CO2.","definition_xrefs":["PMID:32652020","EC:1.14.11.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"gibberellin 3-beta-dioxygenase activity","secondary_identifiers":["RHEA:10104","MetaCyc:RXN1F-170"],"synonyms":[{"name":"(gibberellin-20),2-oxoglutarate:oxygen oxidoreductase (3beta-hydroxylating)","type":"narrow"},{"name":"(gibberrellin-20),2-oxoglutarate: oxygen oxidoreductase (3beta-hydroxylating)","type":"narrow"},{"name":"gibberellin 3-beta-hydroxylase activity","type":"related"},{"name":"gibberellin 3beta-dioxygenase activity","type":"related"},{"name":"gibberellin 3beta-hydroxylase activity","type":"related"}],"termid":"GO:0016707"}


id: MONDO:0018278
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation","termid":"MONDO:0015286"},{"relation_name":"is_a","term_name":"muscular dystrophy-dystroglycanopathy","termid":"MONDO:0018276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336","MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"congenital muscular dystrophy with intellectual disability","secondary_identifiers":["Orphanet:370968","GARD:17606","UMLS:C5190846","MEDGEN:1683413"],"synonyms":[{"name":"CMD with intellectual disability","type":"exact"},{"name":"CMD-MR","type":"exact"}],"termid":"MONDO:0018278","xrefs":{"Monarch":{"xref_id":"0018278"}}}


id: PBO:0076030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 26","termid":"PBO:0076030"}


id: PATO:0000297
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a process which ends earlier than the natural end time or reference process.","definition_xrefs":["PATOC:LC"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"decreased occurrence","termid":"PATO:0002052"},{"relation_name":"is_a","term_name":"offset quality","termid":"PATO:0002324"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrested","secondary_identifiers":["PATO:0001508"],"synonyms":[{"name":"abolished","type":"exact"},{"name":"incomplete","type":"related"}],"termid":"PATO:0000297"}


id: MONDO:0800109
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A interstial lung disease characterized by the presence of persistent or intermittent tachypnea (usually noticed in neonatal period or after an acute infection for the first time in first months of life), crackles in 86 %, retractions in 82%, failure to thrive in 66%, chest wall abnormalities in 22% and hypoxemia or desaturation in 88%.","definition_xrefs":["PMID:32761949","PMID:16957891","PMID:20623780","PMID:26474448"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interstitial lung disease specific to infancy","termid":"MONDO:0017019"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"persistent tachypnoe of infancy","synonyms":[{"name":"PTI","type":"exact"}],"termid":"MONDO:0800109","xrefs":{"Monarch":{"xref_id":"0800109"}}}


id: PBO:0031412
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-tapered_cell","termid":"PBO:0031412"}


id: MONDO:0971056
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"squamous cell neoplasm","termid":"MONDO:0002532"},{"relation_name":"is_a","term_name":"eye neoplasm","termid":"MONDO:0021220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"ocular surface squamous neoplasia","secondary_identifiers":["Orphanet:659744","UMLS:C4761284","MEDGEN:1787978"],"termid":"MONDO:0971056","xrefs":{"Monarch":{"xref_id":"0971056"}}}


id: MONDO:0000853
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Kniest dysplasia (obsolete MONDO:0000853)","termid":"MONDO:0000853","xrefs":{"Monarch":{"xref_id":"0000853"}}}


id: MONDO:0010899
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant nocturnal frontal lobe epilepsy in which the cause of the disease is a mutation in the CHRNA4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial sleep-related hypermotor epilepsy","termid":"MONDO:0000030"},{"relation_name":"is_a","term_name":"autosomal dominant nocturnal frontal lobe epilepsy","termid":"MONDO:0020300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"autosomal dominant nocturnal frontal lobe epilepsy 1","secondary_identifiers":["GARD:15319","OMIM:600513","UMLS:C1838049","DOID:0060682","MEDGEN:324932","MESH:C563930"],"synonyms":[{"name":"CHRNA4 autosomal dominant nocturnal frontal lobe epilepsy","type":"exact"},{"name":"ENFL1","type":"exact"},{"name":"autosomal dominant nocturnal frontal lobe epilepsy caused by mutation in CHRNA4","type":"exact"},{"name":"autosomal dominant nocturnal frontal lobe epilepsy type 1","type":"exact"},{"name":"epilepsy, nocturnal frontal lobe, 1","type":"related"},{"name":"epilepsy, nocturnal frontal lobe, type 1","type":"exact"},{"name":"nocturnal frontal lobe epilepsy 1","type":"exact"}],"termid":"MONDO:0010899","xrefs":{"Monarch":{"xref_id":"0010899"}}}


id: PBO:0113031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of the oligosaccharyltransferase (OST) complex; the OST complex catalyzes asparagine-linked glycosylation of newly synthesized proteins in the ER lumen; involved in recognition of N-acetylglucosamine; forms a subcomplex with Ost3p and Ost4p","termid":"PBO:0113031"}


id: PBO:0002021
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.1.289","termid":"PBO:0002021"}


id: PBO:0027984
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions,_elongated_multinucleate_cell_with_abnormal_septum_morphology","termid":"PBO:0027984"}


id: GO:0051185
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a coenzyme from one side of a membrane to the other. A coenzyme is any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete coenzyme transmembrane transporter activity (obsolete GO:0051185)","synonyms":[{"name":"coenzyme transporter activity","type":"related"}],"termid":"GO:0051185"}


id: PBO:0052107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNAB1 antisense RNA 1","termid":"PBO:0052107"}


id: MONDO:0016914
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of chromosome 16","termid":"MONDO:0016878"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial deletion of the long arm of chromosome 16","secondary_identifiers":["MEDGEN:1790033","Orphanet:262128","GARD:20835","icd11.foundation:324314539","UMLS:C4736186"],"synonyms":[{"name":"partial deletion of chromosome 16q","type":"exact"},{"name":"partial deletion of the long arm of chromosome type 16","type":"exact"},{"name":"partial monosomy of chromosome 16q","type":"exact"},{"name":"partial monosomy of the long arm of chromosome 16","type":"exact"}],"termid":"MONDO:0016914","xrefs":{"Monarch":{"xref_id":"0016914"}}}


id: PBO:0055734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LMO7DN intronic transcript 1","termid":"PBO:0055734"}


id: GO:0019781
data:
  {"annotated_genes":["SJAG_00878","SJAG_03950"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73102,81429],"is_not":false,"summary":null,"term":"GO:0019781"}]},"cv_name":"molecular_function","definition":"Catalysis of the initiation of the NEDD8 (RUB1) conjugation cascade.","definition_xrefs":["PMID:12646924"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like modifier activating enzyme activity","termid":"GO:0008641"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00878":null,"SJAG_03950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874","GO:0140096"],"is_obsolete":false,"name":"NEDD8 activating enzyme activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:6.2.1.64","GO:0019944"],"synonyms":[{"name":"RUB1 activating enzyme activity","type":"exact"}],"termid":"GO:0019781","terms_by_termid":{"GO:0019781":null}}


id: PBO:0003485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleavage factor two Cft2/polyadenylation factor CPSF-73 (predicted)","termid":"PBO:0003485"}


id: GO:0120045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The organization process that preserves a stereocilium in a stable functional or structural state.","definition_xrefs":["GOC:krc","PMID:27693694"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component maintenance","termid":"GO:0043954"},{"relation_name":"is_a","term_name":"inner ear receptor cell stereocilium organization","termid":"GO:0060122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stereocilium maintenance","termid":"GO:0120045"}


id: PBO:0073670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal regulatory protein alpha","termid":"PBO:0073670"}


id: MONDO:0850065
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autoinflammatory syndrome","termid":"MONDO:0019751"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neonatal-onset severe multisystemic autoinflammatory disease with increased IL18","secondary_identifiers":["GARD:22462","MEDGEN:1863412","Orphanet:619363","UMLS:C5925147"],"termid":"MONDO:0850065","xrefs":{"Monarch":{"xref_id":"0850065"}}}


id: PBO:0043519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrobin, centriole duplication and spindle assembly protein","termid":"PBO:0043519"}


id: GO:0102332
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: malonyl-CoA + H+ + a long-chain acyl-[acp] + a reduced electron acceptor = 2 carbon dioxide + coenzyme A + a terminal olefin + a holo-[acyl-carrier protein] + an oxidized electron acceptor.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete fatty-acyl-[acp] elongase/decarboxylase activity (obsolete GO:0102332)","termid":"GO:0102332"}


id: GO:0018281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a C-terminal peptidyl-serine ethanolamide-linked glycosylsphingolipidinositol (GSI) anchor following hydrolysis of a seryl-peptide bond in the carboxy-terminal region of a membrane-associated protein.","definition_xrefs":["RESID:AA0166"],"gene_count":0,"genotype_count":0,"name":"obsolete GSI anchor biosynthetic process via N-seryl-glycosylsphingolipidinositolethanolamine (obsolete GO:0018281)","synonyms":[{"name":"GSI anchor anabolism via N-seryl-glycosylsphingolipidinositolethanolamine","type":"exact"},{"name":"GSI anchor formation via N-seryl-glycosylsphingolipidinositolethanolamine","type":"exact"},{"name":"GSI anchor synthesis via N-seryl-glycosylsphingolipidinositolethanolamine","type":"exact"}],"termid":"GO:0018281"}


id: GO:0044743
data:
  {"annotated_genes":["SJAG_02693","SJAG_02797","SJAG_00326","SJAG_00702","SJAG_03324","SJAG_02997","SJAG_01165","SJAG_02034","SJAG_03440","SJAG_04428","SJAG_00891","SJAG_04857","SJAG_05950","SJAG_02619","SJAG_05315"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71882,81410,98290,113246,104082,75060,73790,72395],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016558"},{"annotations":[72420,75452,63446],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016560"},{"annotations":[117161,100386,119174,65297],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016562"}]},"cv_name":"biological_process","definition":"The directed movement of proteins into an intracellular organelle, across a membrane.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to organelle","termid":"GO:0033365"},{"relation_name":"is_a","term_name":"intracellular protein transmembrane transport","termid":"GO:0065002"},{"relation_name":"is_a","term_name":"establishment of protein localization to organelle","termid":"GO:0072594"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00326":null,"SJAG_00702":null,"SJAG_00891":null,"SJAG_01165":null,"SJAG_02034":null,"SJAG_02619":null,"SJAG_02693":null,"SJAG_02797":null,"SJAG_02997":null,"SJAG_03324":null,"SJAG_03440":null,"SJAG_04428":null,"SJAG_04857":null,"SJAG_05315":null,"SJAG_05950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"protein transmembrane import into intracellular organelle","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0044743","terms_by_termid":{"GO:0016558":null,"GO:0016560":null,"GO:0016562":null}}


id: PATO:0002070
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A molecular quality that arises from the molecular attraction exerted between two atoms or compounds.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular quality","termid":"PATO:0002182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"affinity","termid":"PATO:0002070"}


id: PBO:0027845
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_tyrosine_phosphorylation_during_cellular_response_to_hydroxyurea","termid":"PBO:0027845"}


id: PBO:0090482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase, Sirtuin family, NAD-dependent Hst4","termid":"PBO:0090482"}


id: GO:0002539
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis or release of any prostaglandin following a stimulus as part of an inflammatory response, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arachidonate metabolite production involved in inflammatory response","termid":"GO:0002538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prostaglandin production involved in inflammatory response","synonyms":[{"name":"prostaglandin production involved in acute inflammatory response","type":"broad"}],"termid":"GO:0002539"}


id: PBO:0048351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 62","termid":"PBO:0048351"}


id: MONDO:0005485
data:
  {"annotated_genes":["SJAG_03712","SJAG_01466"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89159,89158],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0005090"}]},"cv_name":"mondo","definition":"An abnormal condition of the mind that involves a loss of contact with reality. People experiencing psychosis may exhibit personality changes and thought disorder. Depending on its severity, this may be accompanied by unusual or bizarre behavior, as well as difficulty with social interaction and impairment in carrying out daily life activities.","definition_xrefs":["Wikipedia:Psychosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cognitive disorder","termid":"MONDO:0002039"},{"relation_name":"is_a","term_name":"mental disorder","termid":"MONDO:0005084"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01466":null,"SJAG_03712":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"psychotic disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:298.8","MEDGEN:19568","NCIT:C78576","HP:0000709","ICD9:298.9","EFO:0005407","UMLS:C0033975","SCTID:69322001","DOID:2468"],"synonyms":[{"name":"mental or behavioral disorder","type":"broad"},{"name":"mental or behavioural disorder","type":"broad"},{"name":"psychosis","type":"exact"}],"termid":"MONDO:0005485","terms_by_termid":{"MONDO:0005090":null},"xrefs":{"Monarch":{"xref_id":"0005485"}}}


id: GO:0001844
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a protein is incorporated into a mitochondrial membrane as the initial phase of the mitochondrial membrane permeabilization that takes place in the apoptotic signaling pathway.","definition_xrefs":["GOC:mtg_apoptosis","GOC:add","PMID:12952892"],"gene_count":0,"genotype_count":0,"name":"obsolete protein insertion into mitochondrial membrane involved in apoptotic signaling pathway (obsolete GO:0001844)","synonyms":[{"name":"insertion of proteins into mitochondrial membranes during the induction of apoptosis","type":"narrow"},{"name":"protein insertion into mitochondrial membrane during induction of apoptosis","type":"narrow"},{"name":"protein insertion into mitochondrial membrane involved in induction of apoptosis","type":"narrow"},{"name":"protein insertion into mitochondrion membrane during induction of apoptosis","type":"narrow"}],"termid":"GO:0001844"}


id: MONDO:0010656
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An X-linked dominant condition caused by mutation(s) in the IQSEC2 gene, encoding IQ motif and SEC7 domain-containing protein 2. It is characterized by substantially impaired intellectual functioning and behavioral abnormalities.","definition_xrefs":["NCIT:C133729"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"non-syndromic X-linked intellectual disability","termid":"MONDO:0019181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked 1","secondary_identifiers":["OMIM:309530","MEDGEN:444070","MESH:C564489","MESH:C567906","Orphanet:397933","DOID:0112038","GARD:22699","UMLS:C2931498"],"synonyms":[{"name":"IQSEC2","type":"related"},{"name":"IQSEC2-related disorder","type":"exact"},{"name":"IQSEC2-related epilepsy","type":"related"},{"name":"IQSEC2-related intellectual disability","type":"related"},{"name":"IQSEC2-related syndromic intellectual disability","type":"exact"},{"name":"MRX","type":"exact"},{"name":"MRX1","type":"exact"},{"name":"MRX78","type":"exact"},{"name":"X-linked intellectual disability 1","type":"related"},{"name":"X-linked intellectual disability 1/78","type":"related"},{"name":"X-linked intellectual disability 78","type":"related"},{"name":"intellectual developmental disorder, X-linked 1, X-linked dominant","type":"exact"},{"name":"intellectual disability, X-linked 1","type":"exact"},{"name":"mental retardation, X-linked 1","type":"exact"},{"name":"mental retardation, X-linked 18","type":"exact"},{"name":"mental retardation, X-linked 78","type":"exact"},{"name":"mental retardation, X-linked type 1","type":"exact"},{"name":"severe intellectual disability-progressive postnatal microcephaly-midline stereotypic hand movements syndrome","type":"related"}],"termid":"MONDO:0010656","xrefs":{"Monarch":{"xref_id":"0010656"}}}


id: PBO:0081657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 582","termid":"PBO:0081657"}


id: SO:0001532
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region recognized by a recombinase.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specific_recombination_site","termid":"SO:0000299"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recombination_signal_sequence","secondary_identifiers":["http://en.wikipedia.org/wiki/Recombination_Signal_Sequences"],"synonyms":[{"name":"recombination signal sequence","type":"related"}],"termid":"SO:0001532"}


id: PBO:0059488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine sulfoxide reductase B3","termid":"PBO:0059488"}


id: PBO:0076728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcobalamin 1","termid":"PBO:0076728"}


id: PBO:0062097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 47","termid":"PBO:0062097"}


id: PBO:0045936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ephrin A1","termid":"PBO:0045936"}


id: PBO:0084028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi-localized protein with homology to gamma-adaptin; interacts with and regulates Arf1p and Arf2p in a GTP-dependent manner in order to facilitate traffic through the late Golgi; GGA1 has a paralog, GGA2, that arose from the whole genome duplication","termid":"PBO:0084028"}


id: FYPO:0003204
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the cell does not contain a detectable secondary cell septum.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aseptate","termid":"FYPO:0000949"},{"relation_name":"is_a","term_name":"abnormal septum during vegetative growth","termid":"FYPO:0002455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0001985","FYPO:0000032","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"secondary cell septum absent from cell during vegetative growth","synonyms":[{"name":"absent secondary cell septum during vegetative growth","type":"exact"},{"name":"secondary cell septum absent from cell during mitotic cell cycle","type":"related"},{"name":"secondary septum absent from cell during vegetative growth","type":"exact"}],"termid":"FYPO:0003204"}


id: MONDO:0000246
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete la Crosse encephalitis (obsolete MONDO:0000246)","termid":"MONDO:0000246","xrefs":{"Monarch":{"xref_id":"0000246"}}}


id: GO:0097154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a neuroblast acquires the specialized structural and functional features of a GABAergic neuron.","definition_xrefs":["GOC:kmv","PMID:11517269"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron differentiation","termid":"GO:0030182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"GABAergic neuron differentiation","termid":"GO:0097154"}


id: PBO:0067201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 266, pseudogene","termid":"PBO:0067201"}


id: GO:0051719
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + DNA containing CpN = S-adenosyl-L-homocysteine + DNA containing 5-MeCpN.","definition_xrefs":["PMID:15689527"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA (cytosine-5-)-methyltransferase activity","termid":"GO:0003886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0140097","GO:0003674","GO:0016741","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"DNA (cytosine-5-)-methyltransferase activity, acting on CpN substrates","secondary_identifiers":["Reactome:R-HSA-5334097","Reactome:R-HSA-9845308","Reactome:R-HSA-5334152"],"termid":"GO:0051719"}


id: PBO:0082388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta-adaptin; large subunit of the clathrin associated protein complex (AP-2); involved in vesicle mediated transport; similar to mammalian beta-chain of the clathrin associated protein complex","termid":"PBO:0082388"}


id: MONDO:0017526
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"polydactyly of a triphalangeal thumb","termid":"MONDO:0008270"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polydactyly of a triphalangeal thumb, bilateral","secondary_identifiers":["icd11.foundation:866920497","Orphanet:295150"],"synonyms":[{"name":"bilateral PPD2","type":"exact"},{"name":"preaxial polydactyly type 2, bilateral","type":"exact"}],"termid":"MONDO:0017526","xrefs":{"Monarch":{"xref_id":"0017526"}}}


id: PBO:0071230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 71","termid":"PBO:0071230"}


id: GO:1905338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of cohesin unloading.","definition_xrefs":["GOC:TermGenie","PMID:26687354","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cohesin unloading (obsolete GO:1905338)","synonyms":[{"name":"down regulation of cohesin unloading","type":"exact"},{"name":"down-regulation of cohesin unloading","type":"exact"},{"name":"downregulation of cohesin unloading","type":"exact"},{"name":"inhibition of cohesin unloading","type":"narrow"}],"termid":"GO:1905338"}


id: GO:0120530
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of UDP-alpha-D-glucose, a substance composed of alpha-D-glucose in glycosidic linkage with uridine diphosphate.","definition_xrefs":["MetaCyc:PWY-7343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-alpha-D-glucose metabolic process","termid":"GO:0006011"},{"relation_name":"is_a","term_name":"nucleotide-sugar biosynthetic process","termid":"GO:0009226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"UDP-alpha-D-glucose biosynthetic process","synonyms":[{"name":"UDP-D-glucose biosynthesis","type":"exact"},{"name":"UDP-D-glucose biosynthetic process","type":"exact"},{"name":"UDP-glucose biosynthesis","type":"exact"},{"name":"uridine diphosphate glucose biosynthesis","type":"exact"},{"name":"uridine diphosphate glucose biosynthetic process","type":"exact"}],"termid":"GO:0120530"}


id: PBO:0076880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 29","termid":"PBO:0076880"}


id: PBO:0068162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 469","termid":"PBO:0068162"}


id: MONDO:0022714
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chester porphyria is a unique type of porphyria with the signs and symptoms of acute intermittent porphyria (AIP) and the biochemical defects of both AIP and variegate porphyria (VP). Chester porphyria does not conform to any of the recognized types of acute porphyria. The symptoms associated with Chester porphyria are similar to those observed in other acute porphyrias. Treatment is symptomatic.","definition_xrefs":["GARD:0010185"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited porphyria","termid":"MONDO:0019142"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019142"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0019142","MONDO:0005093"],"is_obsolete":false,"name":"chester porphyria","secondary_identifiers":["MEDGEN:82789","OMIM:176010","UMLS:C0268322"],"synonyms":[{"name":"PORC","type":"related"},{"name":"porphyria, Chester type","type":"related"}],"termid":"MONDO:0022714","xrefs":{"Monarch":{"xref_id":"0022714"}}}


id: PBO:0058718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6846","termid":"PBO:0058718"}


id: FYPO:0002215
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is viable, is elongated, and is curved along the long axis. In a curved cell, the long axis follows a smooth bend rather than a straight line.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable elongated vegetative cell","termid":"FYPO:0001492"},{"relation_name":"is_a","term_name":"viable curved vegetative cell","termid":"FYPO:0002112"},{"relation_name":"is_a","term_name":"curved elongated vegetative cell","termid":"FYPO:0005103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000004"],"is_obsolete":false,"name":"viable curved elongated vegetative cell","synonyms":[{"name":"curved elongated viable cell","type":"exact"},{"name":"viable curved elongated cell","type":"exact"},{"name":"viable curved elongated cell during vegetative growth","type":"exact"},{"name":"viable curved elongated vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002215"}


id: MONDO:1010968
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dysautonomia that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysautonomia, non-human animal","termid":"MONDO:1010229"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dysautonomia, dog","secondary_identifiers":["OMIA:000312-9615"],"termid":"MONDO:1010968","xrefs":{"Monarch":{"xref_id":"1010968"}}}


id: PBO:0038559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abl interactor 1 pseudogene 1","termid":"PBO:0038559"}


id: GO:0008066
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with glutamate and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:ai","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"glutamate receptor activity","termid":"GO:0008066"}


id: PATO:0001876
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concave 3-D shape quality inhering in a bearer by virtue of the bearer's having two parts, roughly spherical and of equal size, connected by a bar.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concave 3-D shape","termid":"PATO:0002008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dumbbell-shaped","termid":"PATO:0001876"}


id: PBO:0061569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-terminal asparagine amidase pseudogene 3","termid":"PBO:0061569"}


id: MONDO:0032577
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005328","MONDO:0004736"],"is_obsolete":false,"name":"retinitis pigmentosa 83","secondary_identifiers":["GARD:16298","DOID:0112140","MEDGEN:1648404","UMLS:C4748536","OMIM:618173"],"synonyms":[{"name":"RETINITIS PIGMENTOSA 83","type":"related"},{"name":"RP83","type":"related"}],"termid":"MONDO:0032577","xrefs":{"Monarch":{"xref_id":"0032577"}}}


id: GO:0051098
data:
  {"annotated_genes":["SJAG_03088","SJAG_04887"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106982,97109],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904530"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of binding, the selective interaction of a molecule with one or more specific sites on another molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of molecular function","termid":"GO:0065009"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03088":null,"SJAG_04887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0051098","terms_by_termid":{"GO:1904530":null}}


id: FYPO:0003326
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which nucleation of microtubules is normal (i.e. indistinguishable from wild type) during interphase of the mitotic cell cycle. Normally, microtubules are nucleated from interphase microtubule organizing centers (iMTOCs) and from the cytoplasmic face of the spindle pole body (SPB).","definition_xrefs":["PMID:19001497","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0000899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal interphase microtubule nucleation","synonyms":[{"name":"normal interphase cytoplasmic microtubule nucleation","type":"exact"},{"name":"normal microtubule nucleation during interphase during vegetative growth","type":"exact"},{"name":"normal microtubule nucleation during interphase of mitotic cell cycle","type":"related"},{"name":"normal microtubule nucleation during mitotic interphase","type":"exact"}],"termid":"FYPO:0003326"}


id: PBO:0091093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF2434 family conserved fungal multispanning membrane protein","termid":"PBO:0091093"}


id: GO:1900288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of coenzyme F420-dependent bicyclic nitroimidazole catabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"regulates","term_name":"coenzyme F420-dependent bicyclic nitroimidazole catabolic process","termid":"GO:0052799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of coenzyme F420-dependent bicyclic nitroimidazole catabolic process","synonyms":[{"name":"regulation of coenzyme F420-dependent nitroimidazole breakdown","type":"exact"},{"name":"regulation of coenzyme F420-dependent nitroimidazole catabolism","type":"exact"},{"name":"regulation of coenzyme F420-dependent nitroimidazole reduction","type":"exact"},{"name":"regulation of coenzyme F420-dependent nitroreductase activity","type":"related"}],"termid":"GO:1900288"}


id: PBO:0042380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD244 molecule","termid":"PBO:0042380"}


id: PBO:0083912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Forkhead family transcription factor; rate-limiting activator of replication origins; evolutionarily conserved regulator of lifespan; binds multiple chromosomal elements with distinct specificities, cell cycle dynamics; positively regulates transcriptional elongation; facilitates clustering, activation of early-firing replication origins; negative role in chromatin silencing at HML and HMR; major role in expression of G2/M phase genes; relocalizes to cytosol under hypoxia","termid":"PBO:0083912"}


id: MONDO:0010428
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of methylmalonic acidemia with homocystinuria (see this term), an inborn error of vitamin B12 (cobalamin) metabolism characterized by megaloblastic anemia, lethargy, failure to thrive, developmental delay, intellectual deficit and seizures.","definition_xrefs":["Orphanet:217377"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"epilepsy","termid":"MONDO:0005027"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"partial duplication of the short arm of chromosome X","termid":"MONDO:0017009"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome Xp11.23-p11.22 duplication syndrome","secondary_identifiers":["DECIPHER:89","OMIM:300801","UMLS:C2749022","DOID:0060461","GARD:12766","MEDGEN:440690","SCTID:721881008","MESH:C567585"],"synonyms":[{"name":"Xp11.22-p11.23 Microduplication","type":"exact"},{"name":"chromosome Xp11.23-p11.22 duplication syndrome","type":"exact"},{"name":"chromosome xp11.23-p11.22 duplication syndrome, X-linked dominant","type":"exact"},{"name":"microduplication Xp11.22-p11.23 syndrome","type":"exact"},{"name":"trisomy Xp11.22-p11.23","type":"exact"}],"termid":"MONDO:0010428","xrefs":{"Monarch":{"xref_id":"0010428"}}}


id: MOD:00099
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-isoleucine residue to L-isoleucine amide.","definition_xrefs":["RESID:AA0090"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C1-amidated residue","termid":"MOD:00883"},{"relation_name":"is_a","term_name":"modified L-isoleucine residue","termid":"MOD:00910"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-isoleucine amide","synonyms":[{"name":"(2S,3S)-2-amino-3-methylpentanamide","type":"exact"},{"name":"IleN","type":"exact"},{"name":"L-isoleucine amide","type":"exact"},{"name":"MOD_RES Isoleucine amide","type":"exact"},{"name":"amidated L-isoleucine","type":"exact"},{"name":"isoleucinamide","type":"exact"}],"termid":"MOD:00099"}


id: MONDO:0013092
data:
  {"annotated_genes":["SJAG_03131"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89109],"is_not":false,"summary":null,"term":"MONDO:0013092"}]},"cv_name":"mondo","definition":"Any malignant glioma in which the cause of the disease is a mutation in the PTEN gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glioma susceptibility","termid":"MONDO:0100242"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03131":null},"genotype_count":0,"is_obsolete":false,"name":"glioma susceptibility 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:414431","OMIM:613028","UMLS:C2751642"],"synonyms":[{"name":"GLM2","type":"related"},{"name":"PTEN malignant glioma","type":"exact"},{"name":"glioma susceptibility 2","type":"exact"},{"name":"glioma susceptibility type 2","type":"exact"},{"name":"malignant glioma caused by mutation in PTEN","type":"exact"}],"termid":"MONDO:0013092","terms_by_termid":{"MONDO:0013092":null},"xrefs":{"Monarch":{"xref_id":"0013092"}}}


id: PBO:0051015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin like growth factor 2 mRNA binding protein 2","termid":"PBO:0051015"}


id: PBO:0030301
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-monopolar_actin_cortical_patch_localization_to_old_end","termid":"PBO:0030301"}


id: GO:0071455
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating increased oxygen tension.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to increased oxygen levels","termid":"GO:0036295"},{"relation_name":"is_a","term_name":"response to hyperoxia","termid":"GO:0055093"},{"relation_name":"is_a","term_name":"cellular response to chemical stress","termid":"GO:0062197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to hyperoxia","synonyms":[{"name":"cellular response to hyperoxic stress","type":"exact"},{"name":"cellular response to increased oxygen tension","type":"exact"}],"termid":"GO:0071455"}


id: PBO:0087727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Sec61p translocation complex (Sec61p-Sss1p-Sbh1p); this complex forms a channel for passage of secretory proteins through the endoplasmic reticulum membrane, and of the Ssh1p complex (Ssh1p-Sbh2p-Sss1p); interacts with Ost4p and Wbp1p","termid":"PBO:0087727"}


id: PATO:0002122
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A composition quality inhering in a bearer by virtue of the bearer's being composed of more than one identifiable entities.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"composition","termid":"PATO:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mixed","termid":"PATO:0002122"}


id: GO:0021614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the glossopharyngeal nerve to attain its fully functional state. Various sensory and motor branches of the glossopharyngeal nerve supply nerve connections to the pharynx and back of the tongue. The branchial motor component contains motor fibers that innervate muscles that elevate the pharynx and larynx, and the tympanic branch supplies parasympathetic fibers to the otic ganglion.","definition_xrefs":["GOC:dph","GO_REF:0000021","GOC:cls","ISBN:0838580343","GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve maturation","termid":"GO:0021605"},{"relation_name":"part_of","term_name":"glossopharyngeal nerve development","termid":"GO:0021563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glossopharyngeal nerve maturation","synonyms":[{"name":"CN IX maturation","type":"related"}],"termid":"GO:0021614"}


id: GO:1905143
data:
  {"annotated_genes":["SJAG_00353"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102922],"is_not":false,"summary":null,"term":"GO:1905143"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an eukaryotic translation initiation factor 2 complex.","definition_xrefs":["PMID:23775072","GO_REF:0000079","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00353":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"eukaryotic translation initiation factor 2 complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"eIF-2 assembly","type":"exact"},{"name":"eIF-2 formation","type":"exact"},{"name":"eIF2 assembly","type":"exact"},{"name":"eIF2 formation","type":"exact"},{"name":"eukaryotic translation initiation factor 2 complex formation","type":"exact"}],"termid":"GO:1905143","terms_by_termid":{"GO:1905143":null}}


id: PR:O13286
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transducin-like enhancer protein 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat-containing protein srw1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC144.13c","secondary_identifiers":["UniProtKB:O13286"],"synonyms":[{"name":"Spom972h-TLE3","type":"exact"},{"name":"suppressor of rad/wee1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13286"}


id: PBO:0001105
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by phosphate","termid":"PBO:0001105"}


id: PBO:0048124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fucosyltransferase 5","termid":"PBO:0048124"}


id: SO:0001268
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes a small nuclear RNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"sncRNA_gene","termid":"SO:0002342"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snRNA_gene","synonyms":[{"name":"small nuclear RNA gene","type":"exact"},{"name":"snRNA gene","type":"exact"}],"termid":"SO:0001268"}


id: PBO:0045128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DMXL1 divergent transcript","termid":"PBO:0045128"}


id: GO:1990321
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen homotrimer of alpha1(XXII) chains; type XXII collagen triple helices acts as a cell adhesion ligand for skin epithelial cells and fibroblasts.","definition_xrefs":["PMID:17876790","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FACIT collagen trimer","termid":"GO:0005593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"collagen type XXII trimer","termid":"GO:1990321"}


id: GO:0002241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a parasitic plant.","definition_xrefs":["GOC:add","PMID:16547862"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to symbiont","termid":"GO:0009608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to parasitic plant","termid":"GO:0002241"}


id: PBO:0002070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase involved in sporulation","termid":"PBO:0002070"}


id: MONDO:1011109
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cryptorchidism that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cryptorchidism, non-human animal","termid":"MONDO:1010275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptorchidism, domestic cat","secondary_identifiers":["OMIA:000243-9685"],"termid":"MONDO:1011109","xrefs":{"Monarch":{"xref_id":"1011109"}}}


id: PBO:0079311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 5","termid":"PBO:0079311"}


id: GO:0036485
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of trunk neural crest cells from the neural tube, travelling dorso-laterally into the ectoderm and continuing toward the ventral midline of the belly. These migrating trunk neural crest cells become melanocytes, the melanin-forming pigment cells.","definition_xrefs":["GOC:bf","GOC:PARL","GOC:mat","PMID:2387238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trunk neural crest cell migration","termid":"GO:0036484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsolateral trunk neural crest cell migration","synonyms":[{"name":"dorsolateral trunk NCC migration","type":"exact"}],"termid":"GO:0036485"}


id: _global:genome_of
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genome_of","termid":"_global:genome_of"}


id: PR:Q09831
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppk14 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09831"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ppk14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G8.05","synonyms":[{"name":"Spom972h-ppk14","type":"exact"}],"termid":"PR:Q09831"}


id: PBO:0043826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CPS1 intronic transcript 1","termid":"PBO:0043826"}


id: PBO:0116645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF like GTPase 2 binding protein","termid":"PBO:0116645"}


id: FYPO:0007884
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which Lms2-8 complex binding by a gene product (usually a protein) in a mutant does not occur. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PMID:33378677","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein complex binding","termid":"FYPO:0003591"},{"relation_name":"is_a","term_name":"abolished molecular function","termid":"FYPO:0005446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000702","FYPO:0000707","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"abolished Lsm2-8 complex binding","synonyms":[{"name":"Lsm2-8 complex binding abolished","type":"exact"}],"termid":"FYPO:0007884"}


id: GO:0045885
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of survival gene product expression; survival gene products are those that antagonize the apoptotic program. Regulation can be at the transcriptional, translational, or posttranslational level.","definition_xrefs":["GOC:tb","GOC:dph","GOC:go_curators","GOC:mtg_apoptosis"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of survival gene product expression (obsolete GO:0045885)","synonyms":[{"name":"activation of survival gene product activity","type":"broad"},{"name":"positive regulation of survival gene product activity","type":"broad"},{"name":"positive regulation of survival gene product expression","type":"exact"},{"name":"positive regulation of survival gene products","type":"broad"},{"name":"stimulation of survival gene product activity","type":"narrow"},{"name":"up regulation of survival gene product activity","type":"broad"},{"name":"up-regulation of survival gene product activity","type":"broad"},{"name":"upregulation of survival gene product activity","type":"broad"}],"termid":"GO:0045885"}


id: MONDO:0004342
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete osteoclast-like giant cell neoplasm of the pancreas (obsolete MONDO:0004342)","termid":"MONDO:0004342","xrefs":{"Monarch":{"xref_id":"0004342"}}}


id: PBO:0055188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2612","termid":"PBO:0055188"}


id: GO:0003271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened contributing to the modulation of the frequency, rate or extent of cardioblast proliferation in the secondary heart field. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smoothened signaling pathway","termid":"GO:0007224"},{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway involved in heart development","termid":"GO:0061311"},{"relation_name":"part_of","term_name":"regulation of secondary heart field cardioblast proliferation","termid":"GO:0003266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"smoothened signaling pathway involved in regulation of secondary heart field cardioblast proliferation","synonyms":[{"name":"hedgehog signaling pathway involved in regulation of second heart field cardioblast proliferation","type":"exact"},{"name":"hh signaling pathway involved in regulation of second heart field cardioblast proliferation","type":"exact"},{"name":"smoothened receptor signaling pathway involved in regulation of second heart field cardioblast proliferation","type":"exact"},{"name":"smoothened receptor signaling pathway involved in regulation of secondary heart field cardioblast proliferation","type":"exact"},{"name":"smoothened receptor signalling pathway involved in regulation of secondary heart field cardioblast proliferation","type":"exact"}],"termid":"GO:0003271"}


id: MONDO:0000052
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete leukodystrophy, hypomyelinating (obsolete MONDO:0000052)","termid":"MONDO:0000052","xrefs":{"Monarch":{"xref_id":"0000052"}}}


id: PBO:0078142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 21","termid":"PBO:0078142"}


id: PBO:0004342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S27 (predicted)","termid":"PBO:0004342"}


id: GO:0035046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of the male and female pronuclei towards each other prior to their fusion.","definition_xrefs":["PMID:9199363","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear migration","termid":"GO:0007097"},{"relation_name":"part_of","term_name":"single fertilization","termid":"GO:0007338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"pronuclear migration","termid":"GO:0035046"}


id: PBO:0005176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial conserved eukaryotic protein (predicted)","termid":"PBO:0005176"}


id: PBO:0028385
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_spatial_extent_of_CENP-A_containing_nucleosome_assembly","termid":"PBO:0028385"}


id: MONDO:0010464
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic syndrome with a cerebellar malformation as major feature characterized by cerebellar vermis hypo- or aplasia, ventriculomegaly, agenesis of corpus callosum and abnormalities of the brainstem and cerebral cortex in association with ocular coloboma. Clinically, patients show hydrocephalus at birth, neonatal hypotonia with abnormal breathing pattern, ocular abnormalities with impaired vision, severe psychomotor delay, and seizures.","definition_xrefs":["Orphanet:163961"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"X-linked cerebral-cerebellar-coloboma syndrome syndrome","secondary_identifiers":["GARD:17006","MEDGEN:477118","UMLS:C3275487","OMIM:300864"],"synonyms":[{"name":"X-linked cerebral-cerebellar-coloboma syndrome","type":"related"},{"name":"X-linked intellectual disability, Kroes type","type":"exact"},{"name":"cerebral-cerebellar-coloboma syndrome, X-linked","type":"related"},{"name":"cerebral-cerebellar-coloboma syndrome, X-linked, X-linked recessive","type":"exact"}],"termid":"MONDO:0010464","xrefs":{"Monarch":{"xref_id":"0010464"}}}


id: GO:0021563
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Various sensory and motor branches of the glossopharyngeal nerve supply nerve connections to the pharynx and back of the tongue. The branchial motor component contains motor fibers that innervate muscles that elevate the pharynx and larynx, and the tympanic branch supplies parasympathetic fibers to the otic ganglion.","definition_xrefs":["GOC:cls","GOC:dgh","ISBN:0838580343","GOC:dph","GO_REF:0000021","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve development","termid":"GO:0021545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glossopharyngeal nerve development","synonyms":[{"name":"CN IX development","type":"related"},{"name":"cranial nerve 9 development","type":"exact"},{"name":"cranial nerve IX development","type":"exact"}],"termid":"GO:0021563"}


id: MONDO:0003779
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete gliomatosis cerebri (obsolete MONDO:0003779)","termid":"MONDO:0003779","xrefs":{"Monarch":{"xref_id":"0003779"}}}


id: PBO:0066605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras homolog family member T2","termid":"PBO:0066605"}


id: MONDO:0019881
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal trisomy 6q is a rare chromosomal anomaly syndrome resulting from the partial duplication of the long arm of chromosome 6, with highly variable phenotype, typically characterized by growth and developmental delay, intellectual disability, craniofacial dysmorphism (microcephaly, flat facial profile, frontal bossing, hypertelorism, downward-slanting palpebral fissures, flat nasal bridge, anteverted nares, bow shaped mouth, micrognathia), short webbed neck and joint contractures. Cardiac, urogenital, ophthalmologic and hand and foot anomalies, as well as umbilical hernia, spasticity, and seizures, are other features that have been reported.","definition_xrefs":["Orphanet:96098"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of the long arm of chromosome 6","termid":"MONDO:0016957"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal trisomy 6q","secondary_identifiers":["GARD:19314","MESH:C537810","NORD:959","SCTID:763275001","UMLS:C0795817","MEDGEN:162773"],"synonyms":[{"name":"Chromosome 6, Partial Trisomy 6q","type":"exact"},{"name":"distal duplication 6q","type":"exact"},{"name":"distal trisomy type 6q","type":"exact"},{"name":"telomeric duplication 6q","type":"exact"},{"name":"trisomy 6qter","type":"exact"}],"termid":"MONDO:0019881","xrefs":{"Monarch":{"xref_id":"0019881"}}}


id: MONDO:0045063
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive carcinoma that arises from the major salivary glands. It is characterized by the presence of malignant epithelial and myoepithelial cells forming cribriform, tubular, and solid patterns. It usually presents as a slow growing mass. Patients develop pain because of the tendency of these carcinomas to invade perineural tissues.","definition_xrefs":["NCIT:C5905"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salivary gland adenoid cystic carcinoma","termid":"MONDO:0003175"},{"relation_name":"is_a","term_name":"major salivary gland carcinoma","termid":"MONDO:0006284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"major salivary gland adenoid cystic carcinoma","secondary_identifiers":["MEDGEN:235286","UMLS:C1334548"],"synonyms":[{"name":"adenoid cystic carcinoma of major salivary gland","type":"exact"},{"name":"adenoid cystic carcinoma of the major salivary gland","type":"exact"},{"name":"major salivary gland adenoid cystic cancer","type":"exact"},{"name":"major salivary gland adenoid cystic carcinoma","type":"exact"}],"termid":"MONDO:0045063","xrefs":{"Monarch":{"xref_id":"0045063"}}}


id: PBO:0044537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DALR anticodon binding domain containing 3","termid":"PBO:0044537"}


id: GO:0019295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of coenzyme M (2-thioethansulfonate), a coenzyme involved in the utilization of methane by methanogenic prokaryotes.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic acid biosynthetic process","termid":"GO:0016053"},{"relation_name":"is_a","term_name":"coenzyme M metabolic process","termid":"GO:0019296"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"coenzyme M biosynthetic process","secondary_identifiers":["MetaCyc:P261-PWY"],"synonyms":[{"name":"coenzyme M anabolism","type":"exact"},{"name":"coenzyme M biosynthesis","type":"exact"},{"name":"coenzyme M formation","type":"exact"},{"name":"coenzyme M synthesis","type":"exact"}],"termid":"GO:0019295"}


id: PBO:0068681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 62, pseudogene","termid":"PBO:0068681"}


id: MONDO:1011300
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute disease, non-human animal","termid":"MONDO:1011300","xrefs":{"Monarch":{"xref_id":"1011300"}}}


id: PBO:0069789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1075, pseudogene","termid":"PBO:0069789"}


id: MONDO:0030907
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic X-linked intellectual disability","termid":"MONDO:0019181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked 106","secondary_identifiers":["UMLS:C4478379","DOID:0080240","MEDGEN:1389156","OMIM:300997"],"synonyms":[{"name":"MRX106","type":"related"},{"name":"X-linked intellectual disability 106","type":"related"},{"name":"X-linked mental retardation 106","type":"related"},{"name":"intellectual developmental disorder, X-linked 106, X-linked recessive","type":"exact"},{"name":"intellectual disability, X-linked 106","type":"exact"},{"name":"mental retardation, X-linked 106","type":"related"}],"termid":"MONDO:0030907","xrefs":{"Monarch":{"xref_id":"0030907"}}}


id: FYPO:0003229
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the chemical breakdown of hydrogen peroxide is abnormal.","definition_xrefs":["GO:0042744","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal hydrogen peroxide catabolism","synonyms":[{"name":"abnormal H2O2 catabolic process","type":"exact"},{"name":"abnormal H2O2 catabolism","type":"exact"},{"name":"abnormal hydrogen peroxide catabolic process","type":"exact"}],"termid":"FYPO:0003229"}


id: PR:000027617
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription factor zip1 unmodified form in Schizosaccharomyces pombe.","definition_xrefs":["PomBase:MAH","PMID:15660136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription factor zip1","termid":"PR:000027614"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor zip1 unmodified form (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC25G10.03","synonyms":[{"name":"Spom-zip1/UnMod","type":"exact"}],"termid":"PR:000027617"}


id: GO:0004587
data:
  {"annotated_genes":["SJAG_00495"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80146],"is_not":false,"summary":null,"term":"GO:0004587"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 2-oxocarboxylate + L-ornithine = an L-alpha-amino acid + L-glutamate 5-semialdehyde.","definition_xrefs":["EC:2.6.1.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016769","GO:0003824"],"is_obsolete":false,"name":"ornithine aminotransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:ORNITHINE--OXO-ACID-AMINOTRANSFERASE-RXN","Reactome:R-HSA-70666","RHEA:13877","Reactome:R-HSA-70654"],"synonyms":[{"name":"GabT","type":"related"},{"name":"L-ornithine 5-aminotransferase activity","type":"related"},{"name":"L-ornithine aminotransferase activity","type":"related"},{"name":"L-ornithine:2-oxo-acid aminotransferase activity","type":"related"},{"name":"L-ornithine:alpha-ketoglutarate delta-aminotransferase activity","type":"related"},{"name":"OAT","type":"related"},{"name":"ornithine 5-aminotransferase activity","type":"related"},{"name":"ornithine delta-transaminase activity","type":"related"},{"name":"ornithine ketoacid aminotransferase activity","type":"related"},{"name":"ornithine transaminase activity","type":"related"},{"name":"ornithine(lysine) transaminase activity","type":"related"},{"name":"ornithine--2-oxoacid aminotransferase activity","type":"related"},{"name":"ornithine--alpha-ketoglutarate aminotransferase activity","type":"related"},{"name":"ornithine--keto acid aminotransferase activity","type":"related"},{"name":"ornithine--keto acid transaminase activity","type":"related"},{"name":"ornithine--ketoglutarate aminotransferase activity","type":"related"},{"name":"ornithine--oxo acid aminotransferase activity","type":"related"},{"name":"ornithine--oxo-acid transaminase activity","type":"related"},{"name":"ornithine-oxo-acid aminotransferase activity","type":"exact"},{"name":"ornithine-oxo-acid transaminase activity","type":"related"},{"name":"ornithine:alpha-oxoglutarate transaminase activity","type":"related"}],"termid":"GO:0004587","terms_by_termid":{"GO:0004587":null}}


id: PBO:0071206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 47","termid":"PBO:0071206"}


id: GO:1990581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The rupture of the lysosomal membrane and loss of contents as a result of osmotic change, G-protein-driven disintegration, or unspecified cause.","definition_xrefs":["PMID:24472","PMID:9538255"],"gene_count":0,"genotype_count":0,"name":"obsolete lysosome lysis (obsolete GO:1990581)","synonyms":[{"name":"lysosomal lysis","type":"exact"},{"name":"lysosome lysis","type":"exact"}],"termid":"GO:1990581"}


id: PBO:0078194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 5-4","termid":"PBO:0078194"}


id: PBO:0034034
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pubmed_publication_date","termid":"PBO:0034034"}


id: GO:0042577
data:
  {"annotated_genes":["SJAG_02763","SJAG_02356","SJAG_04986","SJAG_00920"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73114,78745,77845],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008195"},{"annotations":[81823],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042392"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a phospholipid + H2O = a lipid + phosphate.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00920":null,"SJAG_02356":null,"SJAG_02763":null,"SJAG_04986":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"lipid phosphatase activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0042577","terms_by_termid":{"GO:0008195":null,"GO:0042392":null}}


id: PBO:0035907
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-C-shaped_vegetative_cell","termid":"PBO:0035907"}


id: GO:0052856
data:
  {"annotated_genes":["SJAG_02462"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75270],"is_not":false,"summary":null,"term":"GO:0052856"}]},"cv_name":"molecular_function","definition":"Catalysis of the reactions: (6R)-NADHX = (6S)-NADHX and (6R)-NADPHX = (6S)-NADPHX.","definition_xrefs":["PMID:21994945","EC:5.1.99.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity","termid":"GO:0016854"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02462":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"NAD(P)HX epimerase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-6806966"],"synonyms":[{"name":"NADHX epimerase activity","type":"narrow"},{"name":"NADPHX epimerase activity","type":"narrow"}],"termid":"GO:0052856","terms_by_termid":{"GO:0052856":null}}


id: PBO:0030714
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_glucosyltransferase_activity","termid":"PBO:0030714"}


id: PBO:0065061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1","termid":"PBO:0065061"}


id: PBO:0048862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOLGA2 pseudogene 7","termid":"PBO:0048862"}


id: MONDO:0019921
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Paternal uniparental disomy of chromosome 6 is an uniparental disomy of paternal origin characterized by intrauterine growth retardation, transient neonatal diabetes mellitus, and macroglossia.","definition_xrefs":["Orphanet:96191"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 6 disorder","termid":"MONDO:0700013"},{"relation_name":"is_a","term_name":"uniparental disomy","termid":"MONDO:0700086"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paternal uniparental disomy of chromosome 6","secondary_identifiers":["UMLS:C4749378","GARD:19340","icd11.foundation:1267556610","MEDGEN:1662050"],"synonyms":[{"name":"UPD(6)pat","type":"exact"},{"name":"paternal uniparental disomy of chromosome type 6","type":"exact"}],"termid":"MONDO:0019921","xrefs":{"Monarch":{"xref_id":"0019921"}}}


id: PBO:0108920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIPIN pseudogene 2","termid":"PBO:0108920"}


id: PBO:0073034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretin receptor","termid":"PBO:0073034"}


id: GO:0099559
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which alignment between postsynaptic density and presynaptic active zone is maintained.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of synapse structure","termid":"GO:0099558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of alignment of postsynaptic density and presynaptic active zone","termid":"GO:0099559"}


id: MONDO:0100225
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A qualitative or quantitative defect of collagen 6 disorder that covers a wide spectrum of musculoskeletal phenotypes caused by dominant and recessive mutations in the three major collagen VI genes: COL6A1, COL6A2, and COL6A3. These variants lead to a variety of overlapping phenotypes, ranging from severe congenital muscle weakness, hypotonia, torticollis and contractures with loss or non-development of ambulation on one end and childhood to adult onset mild muscle weakness, stiffness, and joint hyperlaxity on the other.","definition_xrefs":["PMID:21691338"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myopathy","termid":"MONDO:0005336"},{"relation_name":"is_a","term_name":"qualitative or quantitative protein defects in neuromuscular diseases","termid":"MONDO:0016139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"collagen 6-related myopathy","synonyms":[{"name":"collagen 6-related myopathy","type":"exact"},{"name":"collagen VI-related dystrophy","type":"exact"},{"name":"collagen VI-related muscle disorder","type":"exact"},{"name":"collagen VI-related muscular dystrophy","type":"exact"},{"name":"collagen VI-related myopathy","type":"exact"}],"termid":"MONDO:0100225","xrefs":{"Monarch":{"xref_id":"0100225"}}}


id: GO:0050460
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NH3 + NAD+ + H2O = hydroxylamine + NADH + H+.","definition_xrefs":["MetaCyc:HYDROXYLAMINE-REDUCTASE-NADH-RXN","EC:1.7.1.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor","termid":"GO:0046857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"hydroxylamine reductase (NADH) activity","secondary_identifiers":["RHEA:20581"],"synonyms":[{"name":"N-hydroxy amine reductase activity","type":"related"},{"name":"NADH-hydroxylamine reductase activity","type":"related"},{"name":"NADH2:hydroxylamine oxidoreductase activity","type":"related"},{"name":"NADH:hydroxylamine oxidoreductase activity","type":"related"},{"name":"ammonium dehydrogenase activity","type":"related"},{"name":"ammonium:NAD+ oxidoreductase activity","type":"related"},{"name":"hydroxylamine reductase (NADH2)","type":"related"}],"termid":"GO:0050460"}


id: GO:0016004
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of a phospholipase, an enzyme that catalyzes of the hydrolysis of a glycerophospholipid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipase activator activity","termid":"GO:0060229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0030234","GO:0140677","GO:0098772"],"is_obsolete":false,"name":"phospholipase activator activity","secondary_identifiers":["Reactome:R-HSA-400023"],"termid":"GO:0016004"}


id: PBO:0003942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RRM-containing cyclophilin regulating transcription Rct1","termid":"PBO:0003942"}


id: PBO:0016115
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is not functionally complemented by S. cerevisiae SRP54","termid":"PBO:0016115"}


id: MONDO:0032784
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with seizures and nonepileptic hyperkinetic movements","secondary_identifiers":["MEDGEN:1678038","OMIM:618497","UMLS:C5193128"],"synonyms":[{"name":"NEDNEH","type":"related"},{"name":"NEURODEVELOPMENTAL DISORDER WITH SEIZURES AND NONEPILEPTIC HYPERKINETIC MOVEMENTS","type":"related"}],"termid":"MONDO:0032784","xrefs":{"Monarch":{"xref_id":"0032784"}}}


id: GO:0006271
data:
  {"annotated_genes":["SJAG_00863","SJAG_02667","SJAG_04183","SJAG_02182","SJAG_00884","SJAG_00729","SJAG_04879","SJAG_01823","SJAG_04210","SJAG_04190","SJAG_04877","SJAG_05239","SJAG_03495","SJAG_05197","SJAG_02908","SJAG_02294","SJAG_02818","SJAG_00814","SJAG_02690","SJAG_03780","SJAG_01010","SJAG_00874","SJAG_02199","SJAG_00272","SJAG_05232","SJAG_00198","SJAG_01762","SJAG_00618"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72706,75187,79132],"is_not":false,"summary":null,"term":"GO:0006271"},{"annotations":[115427,117267,66935,72100,111791,114373,69018],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902983"},{"annotations":[76602],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006273"},{"annotations":[72117,76601],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006272"},{"annotations":[110952,120056,106049,97055,104651,106767],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903459"},{"annotations":[97088,109187,97056,91391,108818,95777,106050,106768],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903460"},{"annotations":[102466,105975,94467,102432,73899,96873,103326],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903461"}]},"cv_name":"biological_process","definition":"The process in which an existing DNA strand is extended by activities including the addition of nucleotides to the 3' end of the strand, complementary to an existing template, as part of DNA replication.","definition_xrefs":["ISBN:0815316194","ISBN:071673706X","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA strand elongation","termid":"GO:0022616"},{"relation_name":"part_of","term_name":"DNA-templated DNA replication","termid":"GO:0006261"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00198":null,"SJAG_00272":null,"SJAG_00618":null,"SJAG_00729":null,"SJAG_00814":null,"SJAG_00863":null,"SJAG_00874":null,"SJAG_00884":null,"SJAG_01010":null,"SJAG_01762":null,"SJAG_01823":null,"SJAG_02182":null,"SJAG_02199":null,"SJAG_02294":null,"SJAG_02667":null,"SJAG_02690":null,"SJAG_02818":null,"SJAG_02908":null,"SJAG_03495":null,"SJAG_03780":null,"SJAG_04183":null,"SJAG_04190":null,"SJAG_04210":null,"SJAG_04877":null,"SJAG_04879":null,"SJAG_05197":null,"SJAG_05232":null,"SJAG_05239":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0006260","GO:0008150"],"is_obsolete":false,"name":"DNA strand elongation involved in DNA replication","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-69190"],"synonyms":[{"name":"DNA replication elongation","type":"exact"},{"name":"DNA strand elongation during DNA replication","type":"related"}],"termid":"GO:0006271","terms_by_termid":{"GO:0006271":null,"GO:0006272":null,"GO:0006273":null,"GO:1902983":null,"GO:1903459":null,"GO:1903460":null,"GO:1903461":null}}


id: GO:0022627
data:
  {"annotated_genes":["SJAG_02280","SJAG_00069","SJAG_02046","SJAG_04256","SJAG_03262","SJAG_04663","SJAG_01226","SJAG_04168","SJAG_04188","SJAG_01548","SJAG_02749","SJAG_00733","SJAG_00544","SJAG_02522","SJAG_03254","SJAG_02682","SJAG_04029","SJAG_02335","SJAG_01287","SJAG_01296","SJAG_04695","SJAG_02253","SJAG_04998","SJAG_03034","SJAG_04475","SJAG_01132","SJAG_04814","SJAG_02585","SJAG_00465","SJAG_04174","SJAG_02020","SJAG_02224","SJAG_02477","SJAG_00503","SJAG_02184","SJAG_03859","SJAG_02803","SJAG_02904","SJAG_04324","SJAG_02340","SJAG_01632","SJAG_02870","SJAG_03422","SJAG_03424","SJAG_00468","SJAG_01366","SJAG_04672","SJAG_00523","SJAG_03568","SJAG_02861","SJAG_01512","SJAG_03762","SJAG_04204","SJAG_02479","SJAG_01609","SJAG_01387","SJAG_04476","SJAG_04746","SJAG_02894","SJAG_04342"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[59223,70386,71577,71721,72173,72695,72871,72925,72939,73667,74507,74983,75129,75195,75375,75473,75494,75612,75905,76204,76225,76262,76266,76302,76375,76456,76484,76928,76972,76977,77673,77721,78394,78406,78902,78984,79381,80110,80218,80390,80496,80860,81630,81845,81848,93418,96574,101607,101608,101865,103374,103375,107229,107255,107256,108542,115284,115285,116056,116057],"is_not":false,"summary":null,"term":"GO:0022627"}]},"cv_name":"cellular_component","definition":"The small subunit of a ribosome located in the cytosol.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small ribosomal subunit","termid":"GO:0015935"},{"relation_name":"part_of","term_name":"cytosolic ribosome","termid":"GO:0022626"}],"gene_count":60,"genes_by_uniquename":{"SJAG_00069":null,"SJAG_00465":null,"SJAG_00468":null,"SJAG_00503":null,"SJAG_00523":null,"SJAG_00544":null,"SJAG_00733":null,"SJAG_01132":null,"SJAG_01226":null,"SJAG_01287":null,"SJAG_01296":null,"SJAG_01366":null,"SJAG_01387":null,"SJAG_01512":null,"SJAG_01548":null,"SJAG_01609":null,"SJAG_01632":null,"SJAG_02020":null,"SJAG_02046":null,"SJAG_02184":null,"SJAG_02224":null,"SJAG_02253":null,"SJAG_02280":null,"SJAG_02335":null,"SJAG_02340":null,"SJAG_02477":null,"SJAG_02479":null,"SJAG_02522":null,"SJAG_02585":null,"SJAG_02682":null,"SJAG_02749":null,"SJAG_02803":null,"SJAG_02861":null,"SJAG_02870":null,"SJAG_02894":null,"SJAG_02904":null,"SJAG_03034":null,"SJAG_03254":null,"SJAG_03262":null,"SJAG_03422":null,"SJAG_03424":null,"SJAG_03568":null,"SJAG_03762":null,"SJAG_03859":null,"SJAG_04029":null,"SJAG_04168":null,"SJAG_04174":null,"SJAG_04188":null,"SJAG_04204":null,"SJAG_04256":null,"SJAG_04324":null,"SJAG_04342":null,"SJAG_04475":null,"SJAG_04476":null,"SJAG_04663":null,"SJAG_04672":null,"SJAG_04695":null,"SJAG_04746":null,"SJAG_04814":null,"SJAG_04998":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0022626"}],"interesting_parent_ids":["GO:0005829","GO:0005737","GO:0005575","GO:0032991","GO:0022626"],"is_obsolete":false,"name":"cytosolic small ribosomal subunit","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0030499","GO:0005843","GO:0030873","GO:0009283"],"synonyms":[{"name":"30S ribosomal subunit","type":"narrow"},{"name":"40S ribosomal subunit","type":"narrow"},{"name":"eukaryotic ribosomal SSU","type":"narrow"},{"name":"prokaryotic small ribosomal subunit","type":"narrow"}],"termid":"GO:0022627","terms_by_termid":{"GO:0022627":null}}


id: GO:0031890
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a vasoactive intestinal polypeptide receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor binding","termid":"GO:0071855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"vasoactive intestinal polypeptide receptor binding","synonyms":[{"name":"VIP receptor binding","type":"exact"},{"name":"vasoactive intestinal polypeptide receptor ligand","type":"narrow"}],"termid":"GO:0031890"}


id: PBO:0080916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YWHAQ pseudogene 5","termid":"PBO:0080916"}


id: MONDO:0009599
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Metaphyseal dysostosis-intellectual disability-conductive deafness syndrome is characterized by metaphyseal dysplasia, short-limb dwarfism, mild intellectual deficit and conductive hearing loss, associated with repeated episodes of otitis media in childhood. It has been described in three brothers born to consanguineous Sicilian parents. Variable manifestations included hyperopia and strabismus. The mode of inheritance is autosomal recessive.","definition_xrefs":["Orphanet:2502"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metaphyseal dysostosis-intellectual disability-conductive deafness syndrome","secondary_identifiers":["GARD:3566","MESH:C565396","OMIM:250420","MEDGEN:344437","UMLS:C1855175"],"synonyms":[{"name":"metaphyseal dysostosis intellectual disability conductive deafness","type":"related"},{"name":"metaphyseal dysostosis mental retardation conductive deafness","type":"related"},{"name":"metaphyseal dysostosis, conductive hearing loss and intellectual disability","type":"related"},{"name":"metaphyseal dysostosis, conductive hearing loss and mental retardation","type":"related"},{"name":"metaphyseal dysostosis, intellectual disability, and conductive deafness","type":"related"},{"name":"metaphyseal dysostosis, mental retardation, and conductive deafness","type":"related"}],"termid":"MONDO:0009599","xrefs":{"Monarch":{"xref_id":"0009599"}}}


id: PBO:0041981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 25","termid":"PBO:0041981"}


id: GO:0071393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a progesterone stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to progesterone","termid":"GO:0032570"},{"relation_name":"is_a","term_name":"cellular response to steroid hormone stimulus","termid":"GO:0071383"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to progesterone stimulus","termid":"GO:0071393"}


id: MONDO:0010097
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"coagulation protein disease","termid":"MONDO:0002242"},{"relation_name":"is_a","term_name":"inherited blood coagulation disorder","termid":"MONDO:0021181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"Tatsumi factor deficiency","secondary_identifiers":["UMLS:C1848931","MEDGEN:336460","OMIM:272650","MESH:C564787"],"synonyms":[{"name":"Tatsumi factor deficiency","type":"exact"}],"termid":"MONDO:0010097","xrefs":{"Monarch":{"xref_id":"0010097"}}}


id: GO:0018157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a peptidyl serine-peptidyl glycine, or peptidyl cysteine-peptidyl glycine cross-link by the condensation of the serine hydroxyl or cysteine thiol with the carbonyl of the preceding residue and alpha-beta dehydrogenation.","definition_xrefs":["GOC:jsg"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via an oxazole or thiazole (obsolete GO:0018157)","synonyms":[{"name":"peptide heterocycle biosynthesis","type":"related"},{"name":"peptide heterocycle biosynthetic process","type":"related"},{"name":"peptide heterocycle formation","type":"related"},{"name":"peptide heterocycle synthesis","type":"related"}],"termid":"GO:0018157"}


id: PBO:0082318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase component of the RSC chromatin remodeling complex; required for expression of early meiotic genes; promotes base excision repair in chromatin; essential helicase-related protein homologous to Snf2p","termid":"PBO:0082318"}


id: PBO:0086290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a role in DNA repair; mutants show reduced efficiency of non-homologous end-joining repair","termid":"PBO:0086290"}


id: GO:0005375
data:
  {"annotated_genes":["SJAG_04246","SJAG_01119","SJAG_02399","SJAG_01493","SJAG_03079"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58306,62997,63033,103308],"is_not":false,"summary":null,"term":"GO:0005375"},{"annotations":[79574],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043682"},{"annotations":[109695],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140581"}]},"cv_name":"molecular_function","definition":"Enables the transfer of copper (Cu) ions from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion transmembrane transporter activity","termid":"GO:0046915"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01119":null,"SJAG_01493":null,"SJAG_02399":null,"SJAG_03079":null,"SJAG_04246":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"copper ion transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0005380","Reactome:R-HSA-437300","GO:0015088","GO:0005379","GO:0005378"],"synonyms":[{"name":"copper uptake transmembrane transporter activity","type":"related"},{"name":"intracellular copper ion transporter","type":"narrow"},{"name":"plasma membrane copper transporter","type":"narrow"}],"termid":"GO:0005375","terms_by_termid":{"GO:0005375":null,"GO:0043682":null,"GO:0140581":null}}


id: MONDO:0021198
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare genetic disease (obsolete MONDO:0021198)","secondary_identifiers":["Orphanet:98053"],"termid":"MONDO:0021198","xrefs":{"Monarch":{"xref_id":"0021198"}}}


id: PBO:0029031
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H3-K9_methylation_at_telomere","termid":"PBO:0029031"}


id: PBO:0060200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucin 20, cell surface associated pseudogene 1","termid":"PBO:0060200"}


id: GO:1901144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of insulin.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete insulin biosynthetic process (obsolete GO:1901144)","synonyms":[{"name":"insulin anabolism","type":"exact"},{"name":"insulin biosynthesis","type":"exact"},{"name":"insulin biosynthetic process","type":"exact"},{"name":"insulin formation","type":"exact"},{"name":"insulin synthesis","type":"exact"}],"termid":"GO:1901144"}


id: GO:0005769
data:
  {"annotated_genes":["SJAG_01309","SJAG_01112","SJAG_01448","SJAG_04616","SJAG_03250","SJAG_00314","SJAG_01382","SJAG_01135","SJAG_01379","SJAG_02240"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[74831,74855,76408,81792,81839,101729,104481],"is_not":false,"summary":null,"term":"GO:0005769"},{"annotations":[82053,97712,101528],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031901"}]},"cv_name":"cellular_component","definition":"A membrane-bounded organelle that receives incoming material from primary endocytic vesicles that have been generated by clathrin-dependent and clathrin-independent endocytosis; vesicles fuse with the early endosome to deliver cargo for sorting into recycling or degradation pathways.","definition_xrefs":["PMID:19696797","GOC:mah","NIF_Subcellular:nlx_subcell_20090701"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosome","termid":"GO:0005768"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00314":null,"SJAG_01112":null,"SJAG_01135":null,"SJAG_01309":null,"SJAG_01379":null,"SJAG_01382":null,"SJAG_01448":null,"SJAG_02240":null,"SJAG_03250":null,"SJAG_04616":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005768"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410","GO:0005768"],"is_obsolete":false,"name":"early endosome","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0005769","terms_by_termid":{"GO:0005769":null,"GO:0031901":null}}


id: PBO:0056857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIA2 antisense RNA 1","termid":"PBO:0056857"}


id: GO:0150043
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of the extracellular matrix of the perisynaptic space (the extracellular space adjacent to the synapse) and the synaptic cleft.","definition_xrefs":["GOC:bc","PMID:17189701","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix structural constituent","termid":"GO:0005201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005198"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"structural constituent of synapse-associated extracellular matrix","synonyms":[{"name":"extra-synaptic extracellular matrix structural constituent","type":"exact"},{"name":"structural constituent of extra-synaptic extracellular matrix","type":"exact"},{"name":"synapse-associated extracellular matrix structural constituent","type":"exact"}],"termid":"GO:0150043"}


id: GO:0140094
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of cytoplasmic lattice of the the mammalian ooplasm.","definition_xrefs":["PMID:37922900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005198"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"structural constituent of cytoplasmic lattice","termid":"GO:0140094"}


id: FYPO:0000731
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[121333],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}],"single_locus_phenotype":[{"annotations":[121351,121352],"is_not":false,"summary":null,"term":"FYPO:0000731"},{"annotations":[121322,121323,121334,121330],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the medial cortex is abnormal in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell cortex during vegetative growth","termid":"FYPO:0000928"},{"relation_name":"is_a","term_name":"abnormal protein localization to medial cortex","termid":"FYPO:0001373"},{"relation_name":"is_a","term_name":"abnormal protein localization to cell division site","termid":"FYPO:0001401"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_01665":null,"SJAG_02392":null,"SJAG_03596":null,"SJAG_03703":null,"SJAG_04498":null},"genotype_count":3,"genotypes_by_uniquename":{"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01143","SJAG_02392"],"name":"abnormal protein localization to medial cortex during vegetative growth","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_01143","SJAG_02392"],"single_locus_genotype_uniquenames":["pom1delta","mid1delta"],"synonyms":[{"name":"abnormal protein localisation to medial cortex during vegetative growth","type":"exact"},{"name":"abnormal protein localization to medial cortex during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to medial ring during vegetative growth","type":"exact"}],"termid":"FYPO:0000731","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000731":null,"FYPO:0007177":null,"FYPO_EXT:0000001":null}}


id: FYPO:0006196
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form cytoplasmic microtubules that are shorter than normal and have abnormal orientation. The normal orientation is parallel to the long axis of the cell.","definition_xrefs":["PomBase:mah","PMID:11432827"],"direct_ancestors":[{"relation_name":"has_part","term_name":"misoriented interphase microtubules","termid":"FYPO:0003328"},{"relation_name":"has_part","term_name":"short interphase microtubules","termid":"FYPO:0006103"},{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton morphology during vegetative growth","termid":"FYPO:0001418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0002399"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000054","FYPO:0002399","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"short misoriented interphase microtubules","synonyms":[{"name":"short misoriented cytoplasmic microtubules during mitotic interphase","type":"exact"},{"name":"short misoriented interphase cytoplasmic microtubules","type":"exact"},{"name":"short misoriented interphase microtubules during mitotic cell cycle","type":"related"},{"name":"short misoriented interphase microtubules during vegetative growth","type":"exact"}],"termid":"FYPO:0006196"}


id: PBO:0050678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 8 pseudogene 5","termid":"PBO:0050678"}


id: FYPO:0005211
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle pole body is decreased during anaphase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to mitotic spindle pole body during mitosis","termid":"FYPO:0002822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to mitotic spindle pole body during anaphase","synonyms":[{"name":"decreased protein localisation to mitotic spindle pole body during anaphase","type":"exact"},{"name":"decreased protein localization to mitotic SPB during anaphase","type":"exact"},{"name":"decreased protein localization to mitotic spindle pole body during mitotic anaphase","type":"exact"},{"name":"decreased protein localization to spindle pole body during anaphase during vegetative growth","type":"exact"},{"name":"reduced protein localization to mitotic spindle pole body during anaphase","type":"exact"}],"termid":"FYPO:0005211"}


id: GO:1905906
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of amyloid fibril formation.","definition_xrefs":["GOC:TermGenie","GOC:aruk","GO_REF:0000058","GOC:bc","PMID:23106396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein metabolic process","termid":"GO:0051246"},{"relation_name":"is_a","term_name":"regulation of supramolecular fiber organization","termid":"GO:1902903"},{"relation_name":"regulates","term_name":"amyloid fibril formation","termid":"GO:1990000"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of amyloid fibril formation","synonyms":[{"name":"regulation of amyloid fibril assembly","type":"related"},{"name":"regulation of amyloid structure assembly","type":"related"},{"name":"regulation of amyloid structure formation","type":"related"}],"termid":"GO:1905906"}


id: PBO:0086786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; analysis of HA-tagged protein suggests a membrane localization","termid":"PBO:0086786"}


id: PBO:0068259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 45S pre-ribosomal N1","termid":"PBO:0068259"}


id: SO:0001631
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant located 5' of a gene.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intergenic_variant","termid":"SO:0001628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"upstream_gene_variant","secondary_identifiers":["http://snpeff.sourceforge.net/SnpEff_manual.html","http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences"],"synonyms":[{"name":"ANNOVAR:upstream","type":"related"},{"name":"Jannovar:upstream_gene_variant","type":"exact"},{"name":"VEP:upstream_gene_variant","type":"exact"},{"name":"snpEff:UPSTREAM","type":"exact"},{"name":"upstream gene variant","type":"exact"}],"termid":"SO:0001631"}


id: PBO:0117397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCC complex scaffolding subunit CCDC22","termid":"PBO:0117397"}


id: MONDO:0022965
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A WHO grade I large cystic tumor that occurs almost exclusively in infants, with a prominent desmoplastic stroma having a neuroepithelial population of neoplastic astrocytes together with a variable neuronal component. It involves the superficial cerebral cortex and leptomeninges, and often attaches to the dura. Although clinically it presents as a large tumor, it generally has a good prognosis following surgical resection. (Adapted from WHO)","definition_xrefs":["NCIT:C4738"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mixed neuronal-glial tumor","termid":"MONDO:0016729"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desmoplastic infantile ganglioglioma","secondary_identifiers":["DOID:0081259","GARD:8648","UMLS:C1321878","ONCOTREE:DIG","MEDGEN:231168"],"synonyms":[{"name":"DIG","type":"exact"},{"name":"Desmoplastic infantile ganglioglioma","type":"exact"}],"termid":"MONDO:0022965","xrefs":{"Monarch":{"xref_id":"0022965"}}}


id: MONDO:0000185
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete polyposis syndrome, hereditary mixed (obsolete MONDO:0000185)","termid":"MONDO:0000185","xrefs":{"Monarch":{"xref_id":"0000185"}}}


id: MONDO:0019953
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cystic malformation of the posterior fossa","termid":"MONDO:0020134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"mega-cisterna magna","secondary_identifiers":["UMLS:C1853377","MEDGEN:344031","Orphanet:97252","GARD:19355"],"termid":"MONDO:0019953","xrefs":{"Monarch":{"xref_id":"0019953"}}}


id: MONDO:0015083
data:
  {"annotated_genes":["SJAG_04765","SJAG_01114","SJAG_04522","SJAG_02278"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87154,87155,87156,87157],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011444"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"oculomotor nerve paralysis","termid":"MONDO:0001309"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01114":null,"SJAG_02278":null,"SJAG_04522":null,"SJAG_04765":null},"genotype_count":0,"is_obsolete":false,"name":"nuclear oculomotor paralysis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:100932"],"termid":"MONDO:0015083","terms_by_termid":{"MONDO:0011444":null},"xrefs":{"Monarch":{"xref_id":"0015083"}}}


id: PBO:0029967
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle_regulation_during_cellular_response_to_gamma_radiation","termid":"PBO:0029967"}


id: MONDO:0011210
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial intermembrane space protein Tim12, yeast, homolog of","secondary_identifiers":["MEDGEN:400824","OMIM:602252","UMLS:C1865698"],"synonyms":[{"name":"mitochondrial intermembrane space protein Tim12, yeast, homolog of","type":"exact"}],"termid":"MONDO:0011210","xrefs":{"Monarch":{"xref_id":"0011210"}}}


id: MONDO:0010217
data:
  {"annotated_genes":["SJAG_04114"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88277],"is_not":false,"summary":null,"term":"MONDO:0010217"}]},"cv_name":"mondo","definition":"A rare autosomal recessive inherited syndrome. It is characterized by xeroderma pigmentosum, mental retardation, dwarfism, hypogonadism, and neurologic abnormalities.","definition_xrefs":["NCIT:C84666"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04114":null},"genotype_count":0,"is_obsolete":false,"name":"de Sanctis-Cacchione syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:75550","DOID:0112158","icd11.foundation:594988031","MESH:C535992","NORD:1035","SCTID:414673004","ICD9:759.89","Orphanet:1569","GARD:8276","UMLS:C0265201","OMIM:278800"],"synonyms":[{"name":"De Sanctis Cacchione Syndrome","type":"exact"},{"name":"de Sanctis-Cacchione syndrome","type":"exact"},{"name":"xerodermic idiocy","type":"related"}],"termid":"MONDO:0010217","terms_by_termid":{"MONDO:0010217":null},"xrefs":{"Monarch":{"xref_id":"0010217"}}}


id: GO:0051867
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The set of behavioral processes that occur as part of the general adaptation syndrome, the response of the body to a strong, stressful stimulus.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"},{"relation_name":"part_of","term_name":"general adaptation syndrome","termid":"GO:0051866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"general adaptation syndrome, behavioral process","synonyms":[{"name":"behavioral process during general adaptation syndrome","type":"exact"},{"name":"behavioral response during general adaptation syndrome","type":"exact"},{"name":"behavioural process during general adaptation syndrome","type":"exact"},{"name":"behavioural response during general adaptation syndrome","type":"exact"},{"name":"general adaptation syndrome, behavioral response","type":"exact"},{"name":"general adaptation syndrome, behavioural process","type":"exact"},{"name":"general adaptation syndrome, behavioural response","type":"exact"}],"termid":"GO:0051867"}


id: GO:0043216
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O + daunorubicin(in) = ADP + phosphate + daunorubicin(out).","definition_xrefs":["GOC:mlg"],"gene_count":0,"genotype_count":0,"name":"obsolete ATPase-coupled daunorubicin transmembrane transporter activity (obsolete GO:0043216)","synonyms":[{"name":"ATP-dependent daunorubicin transmembrane transporter activity","type":"exact"},{"name":"daunorubicin ABC transporter","type":"narrow"},{"name":"daunorubicin-transporting ATPase activity","type":"exact"}],"termid":"GO:0043216"}


id: PBO:0040401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V1 subunit G1 pseudogene 2","termid":"PBO:0040401"}


id: FYPO:0000403
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which the duration of progression through the G2/M transition of the mitotic cell cycle is increased.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete increased duration of mitotic G2/M phase transition (obsolete FYPO:0000403)","synonyms":[{"name":"cell cycle progression through the G2/M phase transition: increased duration","type":"related"},{"name":"increased duration of cell cycle progression through mitotic G2/M phase transition","type":"exact"},{"name":"increased duration of mitotic G2/M phase transition during vegetative growth","type":"exact"}],"termid":"FYPO:0000403"}


id: PATO:0000897
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000897 germ line dependent fertility value (obsolete PATO:0000897)","termid":"PATO:0000897"}


id: GO:0070761
data:
  {"annotated_genes":["SJAG_00752","SJAG_05223"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[81494,99758],"is_not":false,"summary":null,"term":"GO:0070761"}]},"cv_name":"cellular_component","definition":"A ribonucleoprotein complex that contains a precursor small nucleolar RNA (pre-snoRNA) and associated proteins, and forms during small nucleolar ribonucleoprotein complex (snoRNP) assembly. Pre-snoRNP complexes may contain proteins not found in the corresponding mature snoRNP complexes.","definition_xrefs":["PMID:17709390","GOC:BHF","GOC:mah","GOC:rl","PMID:17636026"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoprotein complex","termid":"GO:1990904"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00752":null,"SJAG_05223":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"pre-snoRNP complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"pre-small nucleolar ribonucleoprotein complex","type":"exact"}],"termid":"GO:0070761","terms_by_termid":{"GO:0070761":null}}


id: GO:0060515
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that results in the delineation of a specific region of the urogenital sinus epithelium into the area in which the prostate gland will develop.","definition_xrefs":["GOC:dph","PMID:18977204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"specification of animal organ identity","termid":"GO:0010092"},{"relation_name":"part_of","term_name":"prostatic bud formation","termid":"GO:0060513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prostate field specification","termid":"GO:0060515"}


id: PBO:0034315
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_neural_circuit_with","termid":"PBO:0034315"}


id: PBO:0114834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lectin and fungal killer toxin kp4-like domain, cysteine-rich, possibly secreted Mug117","termid":"PBO:0114834"}


id: PBO:0079597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 E2","termid":"PBO:0079597"}


id: MONDO:0850128
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A male reproductive system disease that is located in the epididymis.","definition_xrefs":["DOID:0080373"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male reproductive system disorder","termid":"MONDO:0003150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epididymis disease","termid":"MONDO:0850128","xrefs":{"Monarch":{"xref_id":"0850128"}}}


id: MONDO:0026771
data:
  {"annotated_genes":["SJAG_01831"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87678],"is_not":false,"summary":null,"term":"MONDO:0026771"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"genetic developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01831":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 85, with or without midline brain defects","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:301044","MEDGEN:1708832","UMLS:C5393312","DOID:0070380"],"synonyms":[{"name":"DEE85, with or without midline brain defects","type":"exact"},{"name":"EIEE85","type":"exact"},{"name":"developmental and epileptic encephalopathy 85, with or without midline brain defects, X-linked dominant","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 85, with or without midline brain defects","type":"exact"}],"termid":"MONDO:0026771","terms_by_termid":{"MONDO:0026771":null},"xrefs":{"Monarch":{"xref_id":"0026771"}}}


id: PBO:0057404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548i-1","termid":"PBO:0057404"}


id: PBO:0087618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the conserved chromosomal passenger complex (CPC); complex regulates mitotic chromosome segregation; not required for the kinase activity of the complex; mediates the interaction of Sli15p and Bir1p; other complex members are Ipl1p, Sli15p, and Bir1p","termid":"PBO:0087618"}


id: GO:0018208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-proline.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-amino acid modification","termid":"GO:0018193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-proline modification","termid":"GO:0018208"}


id: PBO:0064243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase D2","termid":"PBO:0064243"}


id: GO:0022000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The close range interaction of the anterior neural ridge to the caudal region of the neural plate that specifies the forebrain fate.","definition_xrefs":["GOC:dph","GOC:cls","GOC:dgh","GO_REF:0000021","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental induction","termid":"GO:0031128"},{"relation_name":"part_of","term_name":"neural plate anterior/posterior regionalization","termid":"GO:0021999"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"forebrain induction by the anterior neural ridge","termid":"GO:0022000"}


id: GO:0106117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an acidocalcisome. An acidocalcisome is an electron-dense acidic membrane-bounded organelle which contains a matrix of pyrophosphate and polyphosphates with bound calcium and other cations.","definition_xrefs":["PMID:25964650","PMID:26523947","GO:0020022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle organization","termid":"GO:0006996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acidocalcisome organization","synonyms":[{"name":"acidocalcisome biogenesis","type":"exact"},{"name":"acidocalcisome organisation","type":"exact"},{"name":"acidocalcisome organization and biogenesis","type":"exact"},{"name":"metachromatic granule organization","type":"exact"},{"name":"polyphosphate vacuole organization","type":"related"},{"name":"volutin granule organization","type":"exact"}],"termid":"GO:0106117"}


id: PBO:0048759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GM2A pseudogene 2","termid":"PBO:0048759"}


id: FYPO:0008058
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed  ability of a polyA robonuclease to catalyze consecutive reactions without releasing the substrate (i.e. template) is abnormal.","definition_xrefs":["PMID:19307292"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal enzyme processivity","termid":"FYPO:0008057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000661","FYPO:0001985","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"increased polyA ribonuclease processivity","termid":"FYPO:0008058"}


id: MONDO:0017370
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autoinflammatory syndrome with skin involvement (obsolete MONDO:0017370)","secondary_identifiers":["Orphanet:290842"],"termid":"MONDO:0017370","xrefs":{"Monarch":{"xref_id":"0017370"}}}


id: GO:0005304
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-valine from one side of a membrane to the other. L-valine is 2-amino-3-methylbutanoic acid.","definition_xrefs":["GOC:ai","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"neutral L-amino acid transmembrane transporter activity","termid":"GO:0015175"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"},{"relation_name":"is_a","term_name":"branched-chain amino acid transmembrane transporter activity","termid":"GO:0015658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"L-valine transmembrane transporter activity","synonyms":[{"name":"L-valine transporter activity","type":"broad"},{"name":"isoleucine/valine:sodium symporter activity","type":"narrow"},{"name":"leucine/isoleucine/valine porter activity","type":"narrow"},{"name":"leucine/valine/isoleucine permease activity","type":"narrow"},{"name":"valine/tyrosine/tryptophan permease activity","type":"narrow"}],"termid":"GO:0005304"}


id: PBO:0080996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 32","termid":"PBO:0080996"}


id: GO:0001066
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template that contains a single subunit type plastid RNA polymerase specific promoter to direct initiation and catalyses DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo'.","definition_xrefs":["PMID:20701995","GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete plastid single subunit type RNA polymerase activity (obsolete GO:0001066)","termid":"GO:0001066"}


id: PBO:0014602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bin3 family, 7SK RNA methyltransferase (predicted)","termid":"PBO:0014602"}


id: PBO:0063112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A)-specific ribonuclease","termid":"PBO:0063112"}


id: GO:0090649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of the deprivation of oxygen and glucose.","definition_xrefs":["GOC:sl","PMID:21525936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nutrient levels","termid":"GO:0031667"},{"relation_name":"is_a","term_name":"response to decreased oxygen levels","termid":"GO:0036293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to oxygen-glucose deprivation","synonyms":[{"name":"response to OGD","type":"exact"}],"termid":"GO:0090649"}


id: GO:0019561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-phenylalanine under anaerobic conditions; occurs via the intermediates phenylpyruvate and phenylacetaldehyde.","definition_xrefs":["MetaCyc:ANAPHENOXI-PWY","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-phenylalanine catabolic process","termid":"GO:0006559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"anaerobic L-phenylalanine oxidation","termid":"GO:0019561"}


id: PBO:0073976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 23 member 1","termid":"PBO:0073976"}


id: PATO:0002286
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Branchiness quality inhering in a bearer by virtue of decreasing the degree to which there are subdivisions or offshoots in a bearer entity.","definition_xrefs":["PATOC:CVS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched","termid":"PATO:0000402"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased branchiness","termid":"PATO:0002286"}


id: GO:2000637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that activates or increases the frequency, rate or extent of gene silencing by a microRNA (miRNA).","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of miRNA-mediated gene silencing","termid":"GO:0060964"},{"relation_name":"is_a","term_name":"positive regulation of post-transcriptional gene silencing by RNA","termid":"GO:1900370"},{"relation_name":"positively_regulates","term_name":"miRNA-mediated post-transcriptional gene silencing","termid":"GO:0035195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of miRNA-mediated gene silencing","synonyms":[{"name":"positive regulation of gene silencing by miRNA","type":"exact"},{"name":"positive regulation of gene silencing by microRNA","type":"related"},{"name":"positive regulation of microRNA-mediated gene silencing","type":"exact"}],"termid":"GO:2000637"}


id: MONDO:0011844
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A myoclonic dystonia characterized by autosomal dominant inheritance that has material basis in variation in the chromosome region 18p11.","definition_xrefs":["DOID:0090035"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myoclonus-dystonia syndrome","termid":"MONDO:0000903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"myoclonic dystonia 15","secondary_identifiers":["UMLS:C1843786","MESH:C538002","NANDO:1200528","MEDGEN:334492","OMIM:607488","GARD:9629","Orphanet:210566"],"synonyms":[{"name":"DYT15","type":"related"},{"name":"dystonia 15, myoclonic","type":"related"},{"name":"dystonia-15, myoclonic","type":"exact"},{"name":"myoclonic dystonia type 15","type":"exact"}],"termid":"MONDO:0011844","xrefs":{"Monarch":{"xref_id":"0011844"}}}


id: GO:0090150
data:
  {"annotated_genes":["SJAG_00858","SJAG_00360","SJAG_02797","SJAG_00175","SJAG_04763","SJAG_01782","SJAG_02354","SJAG_01127","SJAG_02912","SJAG_01949","SJAG_02330","SJAG_04996","SJAG_01282","SJAG_00895","SJAG_01120","SJAG_04129","SJAG_01840","SJAG_03781","SJAG_01367","SJAG_01759","SJAG_01951","SJAG_01999","SJAG_02320","SJAG_01940","SJAG_01299","SJAG_03955","SJAG_05300","SJAG_01733","SJAG_00959","SJAG_02914","SJAG_05302","SJAG_01917","SJAG_03633","SJAG_04451","SJAG_02208","SJAG_03838","SJAG_00916","SJAG_02588","SJAG_03930","SJAG_01640","SJAG_02034","SJAG_04609","SJAG_02065","SJAG_01349","SJAG_01558","SJAG_00603","SJAG_00687","SJAG_01516","SJAG_00569","SJAG_03411","SJAG_03315","SJAG_03756","SJAG_00064","SJAG_04565","SJAG_00144","SJAG_00404","SJAG_02524","SJAG_03440","SJAG_01405","SJAG_01114","SJAG_02456","SJAG_03865","SJAG_02355","SJAG_00379","SJAG_04684","SJAG_05414","SJAG_01780","SJAG_03915","SJAG_01496","SJAG_00330","SJAG_02361","SJAG_02437","SJAG_01112","SJAG_03396","SJAG_03684","SJAG_00277","SJAG_03029","SJAG_01435","SJAG_02282","SJAG_01223","SJAG_01809","SJAG_04203","SJAG_03970","SJAG_03416","SJAG_04294","SJAG_04208","SJAG_03515","SJAG_03502","SJAG_01178","SJAG_01641","SJAG_01240"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99726,109137],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006613"},{"annotations":[93105,67803,114862,102949,96714,61966,120767,114645],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099638"},{"annotations":[97532],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061951"},{"annotations":[102836],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140569"},{"annotations":[76427],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140570"},{"annotations":[114864,111428,110639,79334,96967,71926,108877,108248],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043001"},{"annotations":[89903],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0042997"},{"annotations":[81253,111185,97551,111474],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006620"},{"annotations":[74905,99147,99863,81991,110152],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031204"},{"annotations":[92239,97245,113247],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045046"},{"annotations":[116253,110153,93486,100175,96650,112251,103012,111186,69308,105332,106614,115699,100407,106306,110240,99864,114110,108000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045048"},{"annotations":[104747,90470,58495,75175,75719,118128,77448,79524,109426],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045039"},{"annotations":[76218,58620,80031,80289,80350],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032979"},{"annotations":[71687,100396,112248,113647,111895,59123,78347,109403,100045],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045040"},{"annotations":[60746,97716,74676,72791,76611,76776],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006612"},{"annotations":[92816],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044395"},{"annotations":[67598,111475,70543,96090,74709],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006614"},{"annotations":[116992,93448,116231],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006617"},{"annotations":[74957,99865,75366,77296,104406,110154],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006616"},{"annotations":[76806,89738,74549,115989,116956],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071816"}]},"cv_name":"biological_process","definition":"The directed movement of a protein to a specific location in a membrane.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of protein localization","termid":"GO:0045184"},{"relation_name":"is_a","term_name":"localization within 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of protein localization to membrane","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"establishment of protein localisation in membrane","type":"exact"},{"name":"establishment of protein localization in membrane","type":"exact"}],"termid":"GO:0090150","terms_by_termid":{"GO:0006612":null,"GO:0006613":null,"GO:0006614":null,"GO:0006616":null,"GO:0006617":null,"GO:0006620":null,"GO:0031204":null,"GO:0032979":null,"GO:0042997":null,"GO:0043001":null,"GO:0044395":null,"GO:0045039":null,"GO:0045040":null,"GO:0045046":null,"GO:0045048":null,"GO:0061951":null,"GO:0071816":null,"GO:0099638":null,"GO:0140569":null,"GO:0140570":null}}


id: GO:0004061
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-formyl-L-kynurenine + H2O = formate + L-kynurenine.","definition_xrefs":["EC:3.5.1.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016810","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"arylformamidase activity","secondary_identifiers":["Reactome:R-HSA-71189","RHEA:13009","MetaCyc:ARYLFORMAMIDASE-RXN"],"synonyms":[{"name":"aryl-formylamine amidohydrolase activity","type":"related"},{"name":"formamidase I","type":"related"},{"name":"formamidase II","type":"related"},{"name":"formylase activity","type":"related"},{"name":"formylkynureninase activity","type":"related"},{"name":"formylkynurenine formamidase activity","type":"related"},{"name":"kynurenine formamidase activity","type":"related"}],"termid":"GO:0004061"}


id: FYPO:0006359
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the movement of a protein in cis and trans between heterochromatin domains occurs to a lower extent than normal in regions of pericentric heterochromatin.","definition_xrefs":["PMID:26438724","PomBase:mah","GO:0005721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"},{"relation_name":"is_a","term_name":"abnormal chromatin organization during vegetative growth","termid":"FYPO:0001352"},{"relation_name":"is_a","term_name":"abnormal dynamic protein localization pattern","termid":"FYPO:0006606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000641","FYPO:0000138","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein exchange at pericentric heterochromatin","synonyms":[{"name":"decreased protein exchange at centromeric heterochromatin","type":"exact"},{"name":"decreased protein exchange at pericentric heterochromatin during mitotic cell cycle","type":"related"},{"name":"decreased protein exchange at pericentric heterochromatin during vegetative growth","type":"exact"},{"name":"decreased protein motility on centromeric heterochromatin","type":"exact"},{"name":"reduced protein exchange at pericentric heterochromatin","type":"exact"}],"termid":"FYPO:0006359"}


id: GO:1905378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a D-galactose stimulus.","definition_xrefs":["PMID:26261574","GOC:TermGenie","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to hexose stimulus","termid":"GO:0071331"},{"relation_name":"is_a","term_name":"response to D-galactose","termid":"GO:1905377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to D-galactose","synonyms":[{"name":"cellular response to D-Gal","type":"exact"},{"name":"cellular response to D-galacto-hexose","type":"exact"}],"termid":"GO:1905378"}


id: GO:1904413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cardiac ventricle development.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:19590510"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of cardiac ventricle development","termid":"GO:1904412"},{"relation_name":"negatively_regulates","term_name":"cardiac ventricle development","termid":"GO:0003231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiac ventricle development","synonyms":[{"name":"down regulation of cardiac ventricle development","type":"exact"},{"name":"down-regulation of cardiac ventricle development","type":"exact"},{"name":"downregulation of cardiac ventricle development","type":"exact"},{"name":"inhibition of cardiac ventricle development","type":"narrow"}],"termid":"GO:1904413"}


id: PBO:0070992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L19 pseudogene 16","termid":"PBO:0070992"}


id: GO:1903586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of histone deubiquitination.","definition_xrefs":["GO_REF:0000058","PMID:24526689","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone deubiquitination (obsolete GO:1903586)","synonyms":[{"name":"activation of histone deubiquitination","type":"narrow"},{"name":"activation of histone deubiquitinylation","type":"narrow"},{"name":"activation of histone deubiquitylation","type":"narrow"},{"name":"positive regulation of histone deubiquitinylation","type":"exact"},{"name":"positive regulation of histone deubiquitylation","type":"exact"},{"name":"up regulation of histone deubiquitination","type":"exact"},{"name":"up regulation of histone deubiquitinylation","type":"exact"},{"name":"up regulation of histone deubiquitylation","type":"exact"},{"name":"up-regulation of histone deubiquitination","type":"exact"},{"name":"up-regulation of histone deubiquitinylation","type":"exact"},{"name":"up-regulation of histone deubiquitylation","type":"exact"},{"name":"upregulation of histone deubiquitination","type":"exact"},{"name":"upregulation of histone deubiquitinylation","type":"exact"},{"name":"upregulation of histone deubiquitylation","type":"exact"}],"termid":"GO:1903586"}


id: PBO:0059661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 27","termid":"PBO:0059661"}


id: PBO:0036187
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-ectopic_CENP-A_containing_nucleosome_assembly","termid":"PBO:0036187"}


id: PBO:0054436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1832","termid":"PBO:0054436"}


id: PBO:0113042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chitinase; contains both exochitinase and endochitinase activities in vitro with higher chitobiosidase activity; glycoside hydrolase GH18 family member with putative N-terminal transmembrane domain; functionally complements A. gossypii cts2 mutant sporulation defect","termid":"PBO:0113042"}


id: PBO:0074903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 75","termid":"PBO:0074903"}


id: FYPO:0007710
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Ssb1 accumulates is lower than normal.","definition_xrefs":["PMID:33723569","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased number of Ssb1 foci","synonyms":[{"name":"decreased number of RPA foci","type":"exact"},{"name":"decreased number of Rad11 foci","type":"exact"},{"name":"decreased number of Rpa1 foci","type":"exact"},{"name":"decreased number of Ssb1 foci during mitotic cell cycle","type":"related"},{"name":"decreased number of Ssb1 foci during vegetative growth","type":"exact"},{"name":"reduced number of Ssb1 foci","type":"exact"}],"termid":"FYPO:0007710"}


id: PBO:0057562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 744","termid":"PBO:0057562"}


id: PBO:0056650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 17","termid":"PBO:0056650"}


id: PBO:0045264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein heavy chain domain 1","termid":"PBO:0045264"}


id: PBO:0049826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HDGF like 1","termid":"PBO:0049826"}


id: MONDO:0015546
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Non-distal monosomy 10q is a rare chromosomal anomaly syndrome, resulting from a partial deletion of the long arm of chromosome 10, with a highly variable phenotype principally characterized by developmental delays (usually of language and speech), variable cognitive impairment and neurobehavioral abnormalities such as autism spectrum disorders and attention deficit disorder. Macrocephaly and mild dysmorphic features may by associated. Overlap with other syndromes, such as Cowden syndrome, Bannayan-Riley-Ruvalcaba syndrome and juvenile polyposis syndrome has been reported.","definition_xrefs":["Orphanet:1581"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial monosomy of the long arm of chromosome 10","termid":"MONDO:0016909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-distal monosomy 10q","secondary_identifiers":["MEDGEN:1657787","UMLS:C4749375","GARD:18729"],"synonyms":[{"name":"non-distal deletion 10q","type":"exact"},{"name":"non-distal monosomy type 10q","type":"exact"},{"name":"non-telomeric monosomy 10q","type":"exact"}],"termid":"MONDO:0015546","xrefs":{"Monarch":{"xref_id":"0015546"}}}


id: PBO:0049565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B histone pseudogene 1","termid":"PBO:0049565"}


id: PBO:0064947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"p53 regulation associated lncRNA","termid":"PBO:0064947"}


id: GO:0090185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of kidney development. Kidney development is the process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine.","definition_xrefs":["GOC:dph","GOC:yaf","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of kidney development","termid":"GO:0090183"},{"relation_name":"negatively_regulates","term_name":"kidney development","termid":"GO:0001822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of kidney development","synonyms":[{"name":"negative regulation of nephrogenesis","type":"related"}],"termid":"GO:0090185"}


id: PBO:0055279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2706","termid":"PBO:0055279"}


id: GO:0106166
data:
  {"annotated_genes":["SJAG_05196","SJAG_04558","SJAG_03200"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[82087,104645,114703],"is_not":false,"summary":null,"term":"GO:0106166"}]},"cv_name":"molecular_function","definition":"The binding activity of a molecule that brings together a mitotic spindle pole body and the nuclear membrane, in order to maintain specific membrane location of the spindle pole body.","definition_xrefs":["GOC:vw","PMID:9763447"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-membrane adaptor activity","termid":"GO:0043495"},{"relation_name":"is_a","term_name":"spindle pole body anchor activity","termid":"GO:0140475"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03200":null,"SJAG_04558":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0008093"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0008093","GO:0030674","GO:0003674","GO:0060090"],"is_obsolete":false,"name":"spindle pole body-nuclear membrane anchor activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"nuclear membrane-spindle pole body anchor activity","type":"exact"},{"name":"spindle pole body nuclear membrane anchor activity","type":"exact"}],"termid":"GO:0106166","terms_by_termid":{"GO:0106166":null}}


id: PBO:0001408
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Helicase-Related protein from S. Pombe","termid":"PBO:0001408"}


id: GO:0010992
data:
  {"annotated_genes":["SJAG_00312"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73939],"is_not":false,"summary":null,"term":"GO:0010992"}]},"cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of ubiquitin monomers and free ubiquitin chains at the level of the cell by recycling ubiquitin from proteasome-bound ubiquitinated intermediates.","definition_xrefs":["PMID:19410548","GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular homeostasis","termid":"GO:0019725"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ubiquitin recycling","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0010993"],"synonyms":[{"name":"regulation of ubiquitin homeostasis","type":"narrow"},{"name":"ubiquitin homeostasis","type":"related"}],"termid":"GO:0010992","terms_by_termid":{"GO:0010992":null}}


id: PBO:0017866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug168","termid":"PBO:0017866"}


id: PBO:0072682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RUN and FYVE domain containing 3","termid":"PBO:0072682"}


id: GO:2000568
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of memory T cell activation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell activation","termid":"GO:0050870"},{"relation_name":"is_a","term_name":"regulation of memory T cell activation","termid":"GO:2000567"},{"relation_name":"positively_regulates","term_name":"memory T cell activation","termid":"GO:0035709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of memory T cell activation","termid":"GO:2000568"}


id: GO:0034214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a protein hexamer, a macromolecular structure consisting of six noncovalently associated identical or nonidentical subunits.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein complex oligomerization","termid":"GO:0051259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"protein hexamerization","synonyms":[{"name":"protein hexamer assembly","type":"exact"},{"name":"protein hexamer biosynthesis","type":"exact"},{"name":"protein hexamer biosynthetic process","type":"exact"},{"name":"protein hexamer formation","type":"exact"}],"termid":"GO:0034214"}


id: PBO:0073070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SDCBP2 antisense RNA 1","termid":"PBO:0073070"}


id: GO:0044073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a symbiont organism effects a change in translation, the chemical reactions and pathways resulting in the formation of a protein, in its host organism.","definition_xrefs":["MITRE:tk"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host translation (obsolete GO:0044073)","synonyms":[{"name":"modification by symbiont of host translation","type":"exact"},{"name":"modulation of host translation by symbiont","type":"exact"},{"name":"regulation by symbiont of host translation","type":"exact"}],"termid":"GO:0044073"}


id: PBO:0001285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle subunit Srp21 (predicted)","termid":"PBO:0001285"}


id: PBO:0061059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitrilase family member 2","termid":"PBO:0061059"}


id: GO:0032144
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A homodimeric protein complex that possesses 4-aminobutyrate transaminase activity.","definition_xrefs":["GOC:mah","PMID:15528998"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"4-aminobutyrate transaminase complex","synonyms":[{"name":"ABAT complex","type":"exact"},{"name":"GABA transaminase complex","type":"exact"},{"name":"GABA-T complex","type":"exact"}],"termid":"GO:0032144"}


id: PBO:0051513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IKAROS family zinc finger 3","termid":"PBO:0051513"}


id: FYPO:0006315
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome segregation does not occur. Homologous chromosome segregation is the process in which replicated homologous chromosomes are organized and then physically separated and apportioned to two sets during the first division of the meiotic cell cycle.","definition_xrefs":["GO:0045143","PomBase:mah","PMID:29259000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal homologous chromosome segregation","termid":"FYPO:0004159"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abolished homologous chromosome segregation","synonyms":[{"name":"abolished chromosome segregation during meiosis I","type":"exact"},{"name":"homologous chromosome segregation abolished","type":"exact"}],"termid":"FYPO:0006315"}


id: PBO:0073339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family B member 1","termid":"PBO:0073339"}


id: SO:0001740
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene with a translational start codon of CUG.","definition_xrefs":["SO:mc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_with_non_canonical_start_codon","termid":"SO:0001739"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_with_start_codon_CUG","synonyms":[{"name":"gene with start codon CUG","type":"exact"}],"termid":"SO:0001740"}


id: PBO:0054138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1504","termid":"PBO:0054138"}


id: MONDO:0024284
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A demodicidosis that involves the sebaceous gland.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sebaceous gland disorder","termid":"MONDO:0006607"},{"relation_name":"is_a","term_name":"demodicidosis","termid":"MONDO:0017280"},{"relation_name":"is_a","term_name":"parasitic skin disorder","termid":"MONDO:0024610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"demodicidosis of sebaceous gland","synonyms":[{"name":"sebaceous gland demodicidosis","type":"exact"}],"termid":"MONDO:0024284","xrefs":{"Monarch":{"xref_id":"0024284"}}}


