# terms

id: PBO:0110267
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NSF-Responsive amino acid Transporter","termid":"PBO:0110267"}


id: GO:0098947
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the postsynaptic endocytic zone membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of postsynaptic endocytic zone membrane (obsolete GO:0098947)","synonyms":[{"name":"intrinsic to postsynaptic active zone membrane","type":"narrow"}],"termid":"GO:0098947"}


id: PBO:0000768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Serine","termid":"PBO:0000768"}


id: GO:0061651
data:
  {"annotated_genes":["SJAG_01251"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94727],"is_not":false,"summary":null,"term":"GO:0061651"}]},"cv_name":"molecular_function","definition":"Isoenergetic transfer of Atg12 from one protein to another via the reaction X-Atg12 + Y = Y-Atg12 + X, where both the X-Atg12 and Y-Atg12 linkages are thioester bonds between the C-terminal amino acid of Atg12 and a sulfhydryl side group of a cysteine residue.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Atg12 transferase activity","termid":"GO:0019777"},{"relation_name":"is_a","term_name":"ubiquitin-like protein conjugating enzyme activity","termid":"GO:0061650"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01251":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0140096","GO:0019787","GO:0016746"],"is_obsolete":false,"name":"Atg12 conjugating enzyme activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"E2","type":"broad"}],"termid":"GO:0061651","terms_by_termid":{"GO:0061651":null}}


id: RO:HOM0000002
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Similarity that results from independent evolution.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_similarity_relationship_with","termid":"RO:HOM0000000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_homoplasy_relationship_with","synonyms":[{"name":"analogy","type":"related"},{"name":"homoplasous to","type":"exact"}],"termid":"RO:HOM0000002"}


id: MONDO:0018689
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive plasma cell neoplasm characterized by the presence of neoplastic plasma cells in the peripheral blood. It is characterized by the presence of a circulating clonal plasma cell count that exceeds 2x10^9/L or is 20% of the leukocyte differential count.","definition_xrefs":["NCIT:C3180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma cell neoplasm","termid":"MONDO:0004959"},{"relation_name":"is_a","term_name":"acute lymphoblastic leukemia","termid":"MONDO:0004967"},{"relation_name":"is_a","term_name":"B-cell non-Hodgkin lymphoma","termid":"MONDO:0015759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"plasma cell leukemia","secondary_identifiers":["ICD9:203.1","ICDO:9733/3","MEDGEN:9733","SCTID:95210003","icd11.foundation:2048216430","UMLS:C0023484","ICD9:203.10","GARD:9373","Orphanet:454714","ICD10CM:C90.1","MESH:D007952","EFO:0006475","DOID:9513"],"synonyms":[{"name":"PCL","type":"exact"},{"name":"leukaemia plasmacytic","type":"exact"},{"name":"leukemia plasmacytic","type":"exact"},{"name":"leukemia, plasma cell","type":"related"},{"name":"plasma cell leukemia","type":"exact"},{"name":"plasmacytic leukaemia","type":"exact"},{"name":"plasmacytic leukemia","type":"exact"}],"termid":"MONDO:0018689","xrefs":{"Monarch":{"xref_id":"0018689"}}}


id: PBO:0054585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1988","termid":"PBO:0054585"}


id: MONDO:0010765
data:
  {"annotated_genes":["SJAG_03077"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87605],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:8000015"}]},"cv_name":"mondo","definition":"46,XY complete gonadal dysgenesis (46,XY CGD) is a disorder of sex development (DSD) associated with anomalies in gonadal development that result in the presence of female external and internal genitalia despite the 46,XY karyotype.","definition_xrefs":["Orphanet:242"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic lymphedema (obsolete MONDO:0019520)","termid":"MONDO:0019520"},{"relation_name":"is_a","term_name":"gonadal dysgenesis","termid":"MONDO:0001967"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"},{"relation_name":"is_a","term_name":"familial hypertrophic cardiomyopathy","termid":"MONDO:0024573"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03077":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"46,XY complete gonadal dysgenesis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C2936694","SCTID:95218005","DOID:14448","MESH:D006061","MEDGEN:445380","NCIT:C120198","GARD:5068","NORD:1750","OMIMPS:400044"],"synonyms":[{"name":"46 XY gonadal dysgenesis","type":"exact"},{"name":"46, XY CGD","type":"exact"},{"name":"46, XY complete gonadal dysgenesis","type":"exact"},{"name":"46, XY pure gonadal dysgenesis","type":"exact"},{"name":"46,XY CGD","type":"exact"},{"name":"46,XY SEX reversal","type":"exact"},{"name":"46,XY gonadal dysgenesis","type":"exact"},{"name":"46,XY pure gonadal dysgenesis","type":"exact"},{"name":"Swyer syndrome","type":"exact"},{"name":"gonadal dysgenesis, XY female type","type":"related"},{"name":"pure gonadal dysgenesis 46,XY","type":"exact"},{"name":"sex-reversing locus on X","type":"related"},{"name":"sex-reversing locus on X, formerly","type":"related"},{"name":"testis-determining Factor, X-chromosomal","type":"related"}],"termid":"MONDO:0010765","terms_by_termid":{"MONDO:8000015":null},"xrefs":{"Monarch":{"xref_id":"0010765"}}}


id: GO:0071333
data:
  {"annotated_genes":["SJAG_00472","SJAG_04312","SJAG_01754","SJAG_01254","SJAG_03081","SJAG_04026","SJAG_01699","SJAG_02444","SJAG_00574"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103668,107734,118425,108330,108680,111367,96038,110856,117395],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010619"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glucose stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular glucose homeostasis","termid":"GO:0001678"},{"relation_name":"is_a","term_name":"response to glucose","termid":"GO:0009749"},{"relation_name":"is_a","term_name":"cellular response to hexose stimulus","termid":"GO:0071331"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00472":null,"SJAG_00574":null,"SJAG_01254":null,"SJAG_01699":null,"SJAG_01754":null,"SJAG_02444":null,"SJAG_03081":null,"SJAG_04026":null,"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to glucose stimulus","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071333","terms_by_termid":{"GO:0010619":null}}


id: GO:0090162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification and formation of anisotropic intracellular organization of an epithelial cell.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of cell polarity","termid":"GO:0030010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"establishment of epithelial cell polarity","termid":"GO:0090162"}


id: PBO:0077475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 198","termid":"PBO:0077475"}


id: PBO:0003067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme Ubc16 (predicted)","termid":"PBO:0003067"}


id: PBO:0075745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle 72","termid":"PBO:0075745"}


id: GO:0060404
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of tubulin heterodimers from one or both ends of an axonemal microtubule. An axonemal microtubule is a microtubule in the axoneme of a cilium or flagellum; an axoneme contains nine modified doublet microtubules surrounding a pair of single microtubules.","definition_xrefs":["GOC:krc","GOC:cilia","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic microtubule depolymerization","termid":"GO:0010938"},{"relation_name":"is_a","term_name":"cilium disassembly","termid":"GO:0061523"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0000226","GO:0008150"],"is_obsolete":false,"name":"axonemal microtubule depolymerization","termid":"GO:0060404"}


id: PBO:0047146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 180 member B","termid":"PBO:0047146"}


id: MONDO:0016794
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete maternally-inherited mitochondrial myopathy (obsolete MONDO:0016794)","secondary_identifiers":["Orphanet:254788"],"termid":"MONDO:0016794","xrefs":{"Monarch":{"xref_id":"0016794"}}}


id: MONDO:0800503
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A developmental and epileptic encephalopathy caused by variation in the TMEM63B gene. This disorder is characterised by early-onset drug-resistant epilepsy, with moderate-to-profound intellectual disability, severe motor impairment and brain structural anomalies. Most patients present early generalised hypotonia, nystagmus and central visual impairment, severe dysphagia and haematological abnormalities.","definition_xrefs":["PMID:37421948"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genetic developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"TMEM63B-related developmental and epileptic encephalopathy with anemia","synonyms":[{"name":"TMEM63B-related DEE with anaemia","type":"exact"},{"name":"TMEM63B-related DEE with anemia","type":"exact"},{"name":"TMEM63B-related developmental and epileptic encephalopathy with anaemia","type":"exact"}],"termid":"MONDO:0800503","xrefs":{"Monarch":{"xref_id":"0800503"}}}


id: GO:0019959
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to interleukin-8.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-X-C chemokine binding","termid":"GO:0019958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"interleukin-8 binding","synonyms":[{"name":"IL-8 binding","type":"exact"}],"termid":"GO:0019959"}


id: GO:0018110
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: histone L-arginine + ATP = histone N(omega)-phospho-L-arginine + ADP + 2 H+.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete histone arginine kinase activity (obsolete GO:0018110)","synonyms":[{"name":"histone-arginine kinase activity","type":"exact"}],"termid":"GO:0018110"}


id: PBO:0040911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMS1 pseudogene 15","termid":"PBO:0040911"}


id: PBO:0063311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycomb group ring finger 5","termid":"PBO:0063311"}


id: PBO:0077246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane and coiled-coil domains 6","termid":"PBO:0077246"}


id: MONDO:0014710
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive mendelian susceptibility to mycobacterial diseases due to a complete deficiency in which the cause of the disease is a mutation in the RORC gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited susceptibility to mycobacterial diseases","termid":"MONDO:0019146"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency","secondary_identifiers":["UMLS:C5567647","MEDGEN:1799070","OMIM:616622","DOID:0111940","Orphanet:477857"],"synonyms":[{"name":"IMD42","type":"exact"},{"name":"RORC autosomal recessive mendelian susceptibility to mycobacterial diseases due to a complete deficiency","type":"exact"},{"name":"autosomal recessive MSMD due to complete RORgamma receptor defiency","type":"exact"},{"name":"autosomal recessive mendelian susceptibility to mycobacterial diseases due to a complete deficiency caused by mutation in RORC","type":"exact"},{"name":"autosomal recessive primary immunodeficiency due to RORC mutation","type":"exact"},{"name":"immunodeficiency 42","type":"exact"},{"name":"immunodeficiency type 42","type":"exact"}],"termid":"MONDO:0014710","xrefs":{"Monarch":{"xref_id":"0014710"}}}


id: MONDO:0004899
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"strabismus","termid":"MONDO:0003432"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monofixation syndrome","secondary_identifiers":["SCTID:14785004","MEDGEN:573259","UMLS:C0339611","DOID:9843","ICD10CM:H50.42","icd11.foundation:1068979205","ICD9:378.34"],"synonyms":[{"name":"microstrabismus","type":"exact"},{"name":"microtropia","type":"exact"}],"termid":"MONDO:0004899","xrefs":{"Monarch":{"xref_id":"0004899"}}}


id: MONDO:0001139
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by recurrent sexual urges, fantasies, or behaviors involving the act (real, not simulated) of being humiliated, beaten, bound, or otherwise made to suffer.","definition_xrefs":["NCIT:C94356"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sexual disorder","termid":"MONDO:0000595"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sexual masochism disorder","secondary_identifiers":["ICD10CM:F65.51","MEDGEN:20727","UMLS:C0036908","SCTID:51239001","DOID:10849","ICD9:302.83","MESH:D008398"],"synonyms":[{"name":"sexual masochism","type":"exact"}],"termid":"MONDO:0001139","xrefs":{"Monarch":{"xref_id":"0001139"}}}


id: RO:HOM0000042
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Historical homology that is based on recent shared ancestry, characterizing a monophyletic group.","definition_xrefs":["ISBN:978-0252068140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in_historical_homology_relationship_with","termid":"RO:HOM0000007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_apomorphy_relationship_with","synonyms":[{"name":"apomorphous to","type":"exact"},{"name":"synapomorphy","type":"related"}],"termid":"RO:HOM0000042"}


id: MOD:01342
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:00530. Remap to MOD:00530.","definition_xrefs":["PubMed:12148805","Unimod:162"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01342 selenium substitution for sulfur - site M (obsolete MOD:01342)","synonyms":[{"name":"Delta:S(-1)Se(1)","type":"related"},{"name":"Selenium replaces sulphur","type":"related"}],"termid":"MOD:01342"}


id: GO:0034653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of retinoic acid, one of the three components that makes up vitamin A.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diterpenoid catabolic process","termid":"GO:0016103"},{"relation_name":"is_a","term_name":"fat-soluble vitamin catabolic process","termid":"GO:0042363"},{"relation_name":"is_a","term_name":"retinoic acid metabolic process","termid":"GO:0042573"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006766","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"retinoic acid catabolic process","synonyms":[{"name":"retinoic acid breakdown","type":"exact"},{"name":"retinoic acid catabolism","type":"exact"},{"name":"retinoic acid degradation","type":"exact"},{"name":"vitamin A1 acid catabolic process","type":"exact"}],"termid":"GO:0034653"}


id: FYPO:0006522
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a smaller than normal proportion of cells in the population remains viable after arrest at the mitotic G2/M phase transition of the mitotic cell cycle.","definition_xrefs":["PomBase:mah","PMID:11598020"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"},{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0002057"],"is_obsolete":false,"name":"loss of viability following cell cycle arrest at mitotic G2/M phase transition","synonyms":[{"name":"decreased viability following cell cycle arrest in mitotic G2 phase","type":"exact"},{"name":"loss of cell population viability following cell cycle arrest at mitotic G2/M phase transition","type":"exact"},{"name":"loss of viability following mitotic G2/M arrest","type":"exact"},{"name":"loss of viability of mitotic G2-arrested cells","type":"related"},{"name":"reduced viability following cell cycle arrest at mitotic G2/M phase transition","type":"related"}],"termid":"FYPO:0006522"}


id: GO:1904806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein oxidation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:22719267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein modification process","termid":"GO:0031399"},{"relation_name":"regulates","term_name":"protein oxidation","termid":"GO:0018158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein oxidation","synonyms":[{"name":"regulation of protein amino acid oxidation","type":"exact"}],"termid":"GO:1904806"}


id: PBO:0055989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeats and transmembrane domains 1","termid":"PBO:0055989"}


id: GO:0010578
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of adenylate cyclase (AC) activity that is an integral part of a G protein-coupled receptor signaling pathway.","definition_xrefs":["GOC:dph","GOC:tb","GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of adenylate cyclase activity involved in G protein-coupled receptor signaling pathway (obsolete GO:0010578)","synonyms":[{"name":"regulation of adenylate cyclase activity involved in G-protein coupled receptor signaling pathway","type":"exact"},{"name":"regulation of adenylate cyclase activity involved in G-protein signaling pathway","type":"exact"},{"name":"regulation of adenylate cyclase activity involved in G-protein signalling","type":"exact"}],"termid":"GO:0010578"}


id: GO:0004782
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-sulfino-L-alanine = hypotaurine + CO2.","definition_xrefs":["EC:4.1.1.29"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"sulfinoalanine decarboxylase activity","secondary_identifiers":["RHEA:16877","MetaCyc:SULFINOALANINE-DECARBOXYLASE-RXN","Reactome:R-HSA-1655443"],"synonyms":[{"name":"3-sulfino-L-alanine carboxy-lyase (hypotaurine-forming)","type":"related"},{"name":"3-sulfino-L-alanine carboxy-lyase activity","type":"related"},{"name":"CADCase/CSADCase activity","type":"related"},{"name":"CSAD","type":"related"},{"name":"CSADCase activity","type":"related"},{"name":"L-cysteinesulfinic acid decarboxylase activity","type":"related"},{"name":"cysteic decarboxylase activity","type":"related"},{"name":"cysteine-sulfinate decarboxylase activity","type":"related"},{"name":"cysteinesulfinate decarboxylase activity","type":"related"},{"name":"cysteinesulfinic acid decarboxylase activity","type":"related"},{"name":"sulfoalanine decarboxylase activity","type":"related"},{"name":"sulphinoalanine decarboxylase activity","type":"exact"}],"termid":"GO:0004782"}


id: PBO:0028391
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_glyoxalase_III_activity","termid":"PBO:0028391"}


id: GO:0007250
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stimulation of the activity of NF-kappaB-inducing kinase through phosphorylation at specific residues.","definition_xrefs":["GOC:jl","PMID:12773372"],"direct_ancestors":[{"relation_name":"is_a","term_name":"activation of protein kinase activity","termid":"GO:0032147"},{"relation_name":"part_of","term_name":"non-canonical NF-kappaB signal transduction","termid":"GO:0038061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"activation of NF-kappaB-inducing kinase activity","synonyms":[{"name":"activation of NIK activity","type":"exact"},{"name":"positive regulation of NF-kappaB-inducing kinase activity","type":"broad"}],"termid":"GO:0007250"}


id: PBO:0072361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 47","termid":"PBO:0072361"}


id: PBO:0049932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hematopoietically expressed homeobox","termid":"PBO:0049932"}


id: GO:0033889
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of the 3-sulfate groups of the N-sulfo-D-glucosamine 3-O-sulfate units of heparin.","definition_xrefs":["EC:3.1.6.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfuric ester hydrolase activity","termid":"GO:0008484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"N-sulfoglucosamine-3-sulfatase activity","secondary_identifiers":["MetaCyc:3.1.6.15-RXN"],"synonyms":[{"name":"N-sulfo-3-sulfoglucosamine 3-sulfohydrolase activity","type":"related"},{"name":"chondroitinsulfatase activity","type":"broad"}],"termid":"GO:0033889"}


id: GO:0005497
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an androgen, a male sex hormone.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone binding","termid":"GO:0042562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"androgen binding","termid":"GO:0005497"}


id: MONDO:0032927
data:
  {"annotated_genes":["SJAG_04320"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87276],"is_not":false,"summary":null,"term":"MONDO:0032927"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04320":null},"genotype_count":0,"is_obsolete":false,"name":"triokinase and FMN cyclase deficiency syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:618805","UMLS:C5394125","MEDGEN:1710207"],"synonyms":[{"name":"TKFCD","type":"related"},{"name":"TRIOKINASE AND FMN CYCLASE DEFICIENCY SYNDROME","type":"related"}],"termid":"MONDO:0032927","terms_by_termid":{"MONDO:0032927":null},"xrefs":{"Monarch":{"xref_id":"0032927"}}}


id: PBO:0004887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdc48-Ufd1-Npl4 complex component Ufd1 (predicted)","termid":"PBO:0004887"}


id: PBO:0054646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2051","termid":"PBO:0054646"}


id: GO:2000650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of sodium ion transmembrane transporter activity.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of sodium ion transmembrane transporter activity (obsolete GO:2000650)","synonyms":[{"name":"negative regulation of sodium transporter activity","type":"exact"}],"termid":"GO:2000650"}


id: MONDO:0021394
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A polyp that involves the vagina.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vaginal disorder","termid":"MONDO:0001433"},{"relation_name":"is_a","term_name":"polyp","termid":"MONDO:0005079"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyp of vagina","secondary_identifiers":["icd11.foundation:1664143745","SCTID:29609001","UMLS:C0156390","ICD10CM:N84.2","MEDGEN:56378","ICD9:623.7","NCIT:C3664"],"synonyms":[{"name":"polyp of the vagina","type":"exact"},{"name":"polyp, vaginal, benign","type":"exact"},{"name":"vagina polyp","type":"exact"},{"name":"vaginal polyp","type":"exact"}],"termid":"MONDO:0021394","xrefs":{"Monarch":{"xref_id":"0021394"}}}


id: PBO:0092008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small subunit (15S) rRNA, rns","termid":"PBO:0092008"}


id: GO:0043165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of an outer membrane of the type formed in Gram-negative bacteria. This membrane is enriched in polysaccharide and protein, and the outer leaflet of the membrane contains specific lipopolysaccharide structures.","definition_xrefs":["GOC:jl","ISBN:0135712254"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane assembly","termid":"GO:0071709"},{"relation_name":"part_of","term_name":"cell envelope organization","termid":"GO:0043163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0044085","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"Gram-negative-bacterium-type cell outer membrane assembly","synonyms":[{"name":"cell outer membrane biogenesis","type":"related"}],"termid":"GO:0043165"}


id: GO:0098742
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of one cell to another cell via adhesion molecules that are at least partially embedded in the plasma membrane.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion","termid":"GO:0098609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"cell-cell adhesion via plasma-membrane adhesion molecules","termid":"GO:0098742"}


id: GO:0072181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a mesonephric duct. A mesonephric duct is a tube that drains the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric tubule formation","termid":"GO:0072172"},{"relation_name":"is_a","term_name":"nephric duct formation","termid":"GO:0072179"},{"relation_name":"is_a","term_name":"mesonephric duct morphogenesis","termid":"GO:0072180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric duct formation","synonyms":[{"name":"Wolffian duct formation","type":"exact"}],"termid":"GO:0072181"}


id: GO:0048756
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a sieve cell. A sieve cell is a type of sieve element that has relatively undifferentiated sieve areas (with narrow pores). The sieve areas are rather uniform in structure on all walls; that is, there are no sieve plates. Typical of gymnosperms and lower vascular plants. The sieve element is the cell in the phloem tissue concerned with mainly longitudinal conduction of food materials.","definition_xrefs":["PO:0025415","POC:curators","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sieve element differentiation","termid":"GO:0090603"},{"relation_name":"part_of","term_name":"phloem development","termid":"GO:0010088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sieve cell differentiation","termid":"GO:0048756"}


id: PR:Q8NIP8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wtf12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q8NIP8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein wtf12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC622.21","synonyms":[{"name":"Spom972h-wtf12","type":"exact"}],"termid":"PR:Q8NIP8"}


id: GO:1901631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of presynaptic membrane organization.","definition_xrefs":["GOC:TermGenie","PMID:22426000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of presynaptic membrane organization","termid":"GO:1901629"},{"relation_name":"positively_regulates","term_name":"presynaptic membrane organization","termid":"GO:0097090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"positive regulation of presynaptic membrane organization","synonyms":[{"name":"activation of presynaptic membrane organisation","type":"narrow"},{"name":"activation of presynaptic membrane organization","type":"narrow"},{"name":"positive regulation of pre-synaptic membrane organization","type":"exact"},{"name":"positive regulation of presynaptic membrane organisation","type":"exact"},{"name":"up regulation of presynaptic membrane organisation","type":"exact"},{"name":"up regulation of presynaptic membrane organization","type":"exact"},{"name":"up-regulation of presynaptic membrane organisation","type":"exact"},{"name":"up-regulation of presynaptic membrane organization","type":"exact"},{"name":"upregulation of presynaptic membrane organisation","type":"exact"},{"name":"upregulation of presynaptic membrane organization","type":"exact"}],"termid":"GO:1901631"}


id: GO:0052452
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism modulates the frequency, rate or extent of the innate immune response of the symbiont organism; the innate immune response is the symbiont's first line of defense against infection. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of symbiont innate immunity (obsolete GO:0052452)","synonyms":[{"name":"modulation by organism of symbiont innate immunity","type":"exact"},{"name":"modulation of symbiont innate immune response","type":"exact"}],"termid":"GO:0052452"}


id: GO:1904537
data:
  {"annotated_genes":["SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104193],"is_not":false,"summary":null,"term":"GO:1904537"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mitotic telomere tethering at nuclear periphery.","definition_xrefs":["GOC:TermGenie","PMID:22959349","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of mitotic telomere tethering at nuclear periphery","termid":"GO:1904536"},{"relation_name":"negatively_regulates","term_name":"mitotic telomere tethering at nuclear periphery","termid":"GO:0044820"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mitotic telomere tethering at nuclear periphery","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of mitotic telomere tethering at nuclear periphery","type":"exact"},{"name":"down-regulation of mitotic telomere tethering at nuclear periphery","type":"exact"},{"name":"downregulation of mitotic telomere tethering at nuclear periphery","type":"exact"},{"name":"inhibition of mitotic telomere tethering at nuclear periphery","type":"narrow"}],"termid":"GO:1904537","terms_by_termid":{"GO:1904537":null}}


id: PBO:0015256
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by hamster Dpagt1","termid":"PBO:0015256"}


id: PBO:0083338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the uncharacterized ORFs YLR462W and YLR464W","termid":"PBO:0083338"}


id: PBO:0065098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase cAMP-dependent type I regulatory subunit alpha pseudogene 1","termid":"PBO:0065098"}


id: MONDO:0012879
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A schizophrenia that has material basis in a mutation on chromosome 2q32.1.","definition_xrefs":["DOID:0070090"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"schizophrenia","termid":"MONDO:0005090"},{"relation_name":"is_a","term_name":"schizophrenia, susceptibility to","termid":"MONDO:0100182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"schizophrenia 14","secondary_identifiers":["MEDGEN:436991","OMIM:612361","UMLS:C2677614"],"synonyms":[{"name":"SCZD14","type":"exact"},{"name":"Sczd14","type":"related"},{"name":"schizophrenia 14","type":"exact"},{"name":"schizophrenia susceptibility locus, chromosome 2Q32-related","type":"related"},{"name":"schizophrenia type 14","type":"exact"},{"name":"schizophrenia, susceptibility to, 14","type":"exact"}],"termid":"MONDO:0012879","xrefs":{"Monarch":{"xref_id":"0012879"}}}


id: PBO:0089811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Swr1 complex histone chaperone module subunit Swc3","termid":"PBO:0089811"}


id: PBO:0090343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase PP2B (calcineurin B) regulatory subunit","termid":"PBO:0090343"}


id: FYPO:0008200
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 occurs to a lower extent than normal at the centromere inner repeat.","direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K9 methylation during vegetative growth","termid":"FYPO:0000872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0002494","FYPO:0001320","FYPO:0002274"],"is_obsolete":false,"name":"decreased histone H3-K9 methylation at centromere inner repeat during vegetative growth","termid":"FYPO:0008200"}


id: MONDO:0018667
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The presence of pus in the thoracic cavity, between the visceral and parietal pleura.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pleural disorder","termid":"MONDO:0002037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleural empyema","secondary_identifiers":["SCTID:405950009","MESH:D016724","MEDGEN:4928","HP:0011919","Orphanet:449266","UMLS:C0014013","EFO:0009680","DOID:3798","GARD:21879"],"synonyms":[{"name":"abscess of pleural cavity","type":"exact"},{"name":"abscess of thorax","type":"related"},{"name":"empyema","type":"related"},{"name":"empyema of pleura","type":"exact"},{"name":"pleural empyema","type":"exact"},{"name":"pleural empyema (disease)","type":"exact"},{"name":"purulent pleurisy","type":"related"},{"name":"purulent pleuritis","type":"related"},{"name":"pyothorax","type":"related"},{"name":"thorax abscess","type":"related"}],"termid":"MONDO:0018667","xrefs":{"Monarch":{"xref_id":"0018667"}}}


id: PBO:0066777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 75","termid":"PBO:0066777"}


id: PR:Q09768
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glutamate--cysteine ligase catalytic subunit that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00267","PRO:DNx","PANTHER:PTHR11164:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate--cysteine ligase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F3.10c","secondary_identifiers":["UniProtKB:Q09768"],"synonyms":[{"name":"GCS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-GCLC","type":"exact"},{"name":"gamma-ECS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"gamma-glutamylcysteine synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09768"}


id: PBO:0085716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in SRP-independent targeting of substrates to the ER; component of an alternative ER targeting pathway that has partial functional redundancy with the GET pathway; preference for substrates with downstream transmembrane domains; interacts with Env10p/Snd2p and Pho88p/Snd3p; can compensate for loss of SRP; co-purifies with ribosomes; GFP-fusion protein localizes to the cytoplasm","termid":"PBO:0085716"}


id: FYPO:0003053
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome pairing during meiosis (synapsis) is increased (i.e. occurs to a greater extent) at a cis-acting homologous chromosome pairing region such as the sme2 locus.","definition_xrefs":["PMID:23117617","PMID:24173580","PMID:22582262","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal homologous chromosome pairing at cis-acting homologous chromosome pairing region","termid":"FYPO:0003052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000641","FYPO:0001985","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"increased homologous chromosome pairing at cis-acting homologous chromosome pairing region","synonyms":[{"name":"increased homologous chromosome pairing at meiosis at cis-acting homologous chromosome pairing region","type":"exact"},{"name":"increased homologous chromosome pairing at sme2 locus","type":"narrow"},{"name":"increased synapsis at cis-acting homologous chromosome pairing region","type":"exact"}],"termid":"FYPO:0003053"}


id: SO:0000580
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding a methylation guide small nucleolar RNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snoRNA_primary_transcript","termid":"SO:0000232"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylation_guide_snoRNA_primary_transcript","synonyms":[{"name":"methylation guide snoRNA primary transcript","type":"exact"}],"termid":"SO:0000580"}


id: GO:0048147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of multiplication or reproduction of fibroblast cells.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"is_a","term_name":"regulation of fibroblast proliferation","termid":"GO:0048145"},{"relation_name":"negatively_regulates","term_name":"fibroblast proliferation","termid":"GO:0048144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of fibroblast proliferation","synonyms":[{"name":"down regulation of fibroblast proliferation","type":"exact"},{"name":"down-regulation of fibroblast proliferation","type":"exact"},{"name":"downregulation of fibroblast proliferation","type":"exact"},{"name":"inhibition of fibroblast proliferation","type":"narrow"}],"termid":"GO:0048147"}


id: MONDO:0012437
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any early-onset non-syndromic cataract in which the cause of the disease is a mutation in the MAF gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset non-syndromic cataract","termid":"MONDO:0011060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 21 multiple types","secondary_identifiers":["UMLS:C1857768","OMIM:610202","MEDGEN:347538","MESH:C565703","DOID:0110256"],"synonyms":[{"name":"CCA4","type":"narrow"},{"name":"CTRCT21","type":"exact"},{"name":"MAF early-onset non-syndromic cataract","type":"exact"},{"name":"cataract 21 multiple types with or without microcornea","type":"exact"},{"name":"cataract 21, multiple types","type":"related"},{"name":"cataract 21, multiple types, with or without microcornea","type":"related"},{"name":"cataract, congenital, cerulean type, 4","type":"related"},{"name":"cataract, pulverulent, juvenile-onset","type":"related"},{"name":"congenital cataract cerulean type 4","type":"narrow"},{"name":"early-onset non-syndromic cataract caused by mutation in MAF","type":"exact"}],"termid":"MONDO:0012437","xrefs":{"Monarch":{"xref_id":"0012437"}}}


id: MONDO:0009223
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypogonadotropic hypogonadism in which the cause of the disease is a mutation in the LHB gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypogonadotropic hypogonadism","termid":"MONDO:0018555"},{"relation_name":"is_a","term_name":"Leydig cell hypoplasia","termid":"MONDO:0019155"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypogonadotropic hypogonadism 23 with or without anosmia","secondary_identifiers":["DOID:0090091","OMIM:228300","Orphanet:325448","UMLS:C0271582","GARD:10127","ICD9:253.4","SCTID:8829008","MEDGEN:82881","MESH:C537919"],"synonyms":[{"name":"46,XY DSD due to LHB deficiency","type":"exact"},{"name":"46,XY DSD due to luteinizing hormone subunit beta deficiency","type":"exact"},{"name":"46,XY disorder of sex development due to LHB deficiency","type":"exact"},{"name":"46,XY disorder of sex development due to luteinizing hormone subunit beta deficiency","type":"exact"},{"name":"HH23","type":"related"},{"name":"LHB hypogonadotropic hypogonadism","type":"exact"},{"name":"Leydig cell hypoplasia due to LHB deficiency","type":"exact"},{"name":"Leydig cell hypoplasia due to luteinizing hormone subunit beta deficiency","type":"exact"},{"name":"Pasqualini syndrome","type":"exact"},{"name":"eunuchoidism with spermatogenesis, normal FSH and low or normal interstitial cell-stimulating hormone (ICSH)","type":"related"},{"name":"fertile eunuch syndrome","type":"exact"},{"name":"hypogonadotropic hypogonadism 23 without anosmia","type":"related"},{"name":"hypogonadotropic hypogonadism caused by mutation in LHB","type":"exact"}],"termid":"MONDO:0009223","xrefs":{"Monarch":{"xref_id":"0009223"}}}


id: PBO:0047667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKTN antisense RNA 1","termid":"PBO:0047667"}


id: PBO:0034322
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_evidence_for","termid":"PBO:0034322"}


id: MONDO:0005517
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm that affects the pharynx.","definition_xrefs":["NCIT:C7545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system cancer","termid":"MONDO:0000376"},{"relation_name":"is_a","term_name":"digestive system cancer","termid":"MONDO:0002516"},{"relation_name":"is_a","term_name":"disorder of pharynx","termid":"MONDO:0020592"},{"relation_name":"is_a","term_name":"pharynx neoplasm","termid":"MONDO:0021246"},{"relation_name":"is_a","term_name":"malignant tumor of neck","termid":"MONDO:0021310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"pharynx cancer","secondary_identifiers":["EFO:0005577","UMLS:C0153405","MEDGEN:57554","DOID:0060119","MESH:D010610"],"synonyms":[{"name":"cancer of chordate pharynx","type":"exact"},{"name":"cancer of pharynx","type":"exact"},{"name":"chordate pharynx cancer","type":"exact"},{"name":"malignant chordate pharynx neoplasm","type":"exact"},{"name":"malignant neoplasm of chordate pharynx","type":"exact"},{"name":"malignant neoplasm of pharynx","type":"exact"},{"name":"malignant pharyngeal neoplasm","type":"exact"},{"name":"malignant pharyngeal tumor","type":"exact"},{"name":"malignant pharyngeal tumour","type":"exact"},{"name":"malignant pharynx neoplasm","type":"exact"},{"name":"malignant pharynx tumor","type":"exact"},{"name":"malignant pharynx tumour","type":"exact"},{"name":"malignant tumor of pharynx","type":"exact"},{"name":"malignant tumor of the pharynx","type":"exact"},{"name":"malignant tumour of pharynx","type":"exact"},{"name":"malignant tumour of the pharynx","type":"exact"},{"name":"pharyngeal cancer","type":"related"},{"name":"pharyngeal neoplasm","type":"exact"},{"name":"pharynx cancer","type":"exact"},{"name":"pharynx neoplasm","type":"broad"}],"termid":"MONDO:0005517","xrefs":{"Monarch":{"xref_id":"0005517"}}}


id: MONDO:0032657
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"genetic developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 69","secondary_identifiers":["DOID:0112205","MEDGEN:1648381","UMLS:C4748988","OMIM:618285"],"synonyms":[{"name":"DEE69","type":"exact"},{"name":"EIEE69","type":"exact"},{"name":"EPILEPTIC ENCEPHALOPATHY, EARLY INFANTILE, 69","type":"exact"},{"name":"developmental and epileptic encephalopathy 69","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 69","type":"exact"}],"termid":"MONDO:0032657","xrefs":{"Monarch":{"xref_id":"0032657"}}}


id: PBO:0088044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-conjugating enzyme involved in ERAD; located at the cytosolic side of the ER membrane; tail region contains a transmembrane segment at the C-terminus; substrate of the ubiquitin-proteasome pathway; ER-associated protein degradation is also known as ERAD","termid":"PBO:0088044"}


id: PBO:0080743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X active specific transcript","termid":"PBO:0080743"}


id: GO:0035444
data:
  {"annotated_genes":["SJAG_04830"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[81670],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098716"}]},"cv_name":"biological_process","definition":"The directed movement of nickel (Ni) cations across a membrane by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nickel cation transport","termid":"GO:0015675"},{"relation_name":"is_a","term_name":"monoatomic cation transmembrane transport","termid":"GO:0098655"},{"relation_name":"is_a","term_name":"inorganic cation transmembrane transport","termid":"GO:0098662"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04830":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"nickel cation transmembrane transport","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"nickel cation membrane transport","type":"exact"}],"termid":"GO:0035444","terms_by_termid":{"GO:0098716":null}}


id: FYPO:0009092
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing lysine and serine as nitrogen sources.","direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002058","FYPO:0001985","FYPO:0000139","FYPO:0002057","FYPO:0002060","FYPO:0005447"],"is_obsolete":false,"name":"decreased cell population growth on lysine and serine nitrogen source","synonyms":[{"name":"decreased vegetative cell growth on lysine and serine nitrogen source","type":"exact"}],"termid":"FYPO:0009092"}


id: PBO:0071800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulation of nuclear pre-mRNA domain containing 1A","termid":"PBO:0071800"}


id: PBO:0059866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotubularin related protein 3","termid":"PBO:0059866"}


id: PBO:0063854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"p53 inducible cancer associated RNA transcript 1","termid":"PBO:0063854"}


id: PBO:0030170
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_meiotic_strand_displacement","termid":"PBO:0030170"}


id: PBO:0049523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A.Q variant histone 1, pseudogene","termid":"PBO:0049523"}


id: GO:0030668
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a dense granule of the type found in apicomplexan parasites.","definition_xrefs":["GOC:mtg_sensu","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule membrane","termid":"GO:0030667"},{"relation_name":"part_of","term_name":"apicomplexan dense granule","termid":"GO:0020026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"apicomplexan dense granule membrane","termid":"GO:0030668"}


id: PBO:0058659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6787","termid":"PBO:0058659"}


id: FYPO:0006100
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cytoplasm is decreased, and some of the protein is present in the nucleus instead.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"protein mislocalized to nucleus during vegetative growth","termid":"FYPO:0000784"},{"relation_name":"is_a","term_name":"protein mislocalized to nucleus during vegetative growth","termid":"FYPO:0000784"},{"relation_name":"is_a","term_name":"decreased protein localization to cytoplasm","termid":"FYPO:0006099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to cytoplasm, with protein mislocalized to nucleus","synonyms":[{"name":"decreased protein localisation to cytoplasm, with protein mislocalised to nucleus","type":"exact"},{"name":"decreased protein localization in cytoplasm, with protein mislocalized to nucleus","type":"exact"},{"name":"decreased protein localization to cytoplasm, with protein mislocalized to nucleus, during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to cytoplasm, with protein mislocalized to nucleus, during vegetative growth","type":"exact"},{"name":"reduced protein localization to cytoplasm, with protein mislocalized to nucleus","type":"exact"}],"termid":"FYPO:0006100"}


id: FYECO:0000155
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which choline was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ choline","termid":"FYECO:0000155"}


id: PR:Q8TFG6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppk18 gene.","definition_xrefs":["UniProtKB:Q8TFG6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ppk18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB18E9.02c","synonyms":[{"name":"Spom972h-ppk18","type":"exact"}],"termid":"PR:Q8TFG6"}


id: GO:0046741
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The transport of a virus between tissues in a multicellular organism.","definition_xrefs":["GOC:bf","GOC:jl","ISBN:0781718325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport of virus in multicellular host","termid":"GO:0046739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"transport of virus in host, tissue to tissue","synonyms":[{"name":"spread of virus in host, tissue to tissue","type":"related"},{"name":"spread of virus within host, tissue to tissue","type":"exact"},{"name":"tissue to tissue spread of virus within host","type":"exact"},{"name":"viral spread within host, tissue to tissue","type":"exact"}],"termid":"GO:0046741"}


id: PBO:0041847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CASK interacting protein 1","termid":"PBO:0041847"}


id: PBO:0090228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar carboxypeptidase","termid":"PBO:0090228"}


id: GO:1900466
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of arginine biosynthetic process by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:19233144","PMID:8455631","GOC:TermGenie","GOC:dgf"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of arginine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:1900466)","synonyms":[{"name":"activation of arginine anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"activation of arginine biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"activation of arginine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"activation of arginine formation by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"activation of arginine synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"positive regulation of arginine anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of arginine biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of arginine formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of arginine synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of arginine anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of arginine biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of arginine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of arginine formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of arginine synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of arginine anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of arginine biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of arginine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of arginine formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of arginine synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of arginine anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of arginine biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of arginine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of arginine formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of arginine synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900466"}


id: GO:0060409
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of the chemical reactions and pathways involving acetylcholine, the acetic acid ester of the organic base choline. Acetylcholine is a major neurotransmitter and neuromodulator both in the central and peripheral nervous systems. It also acts as a paracrine signal in various non-neural tissues.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amine metabolic process","termid":"GO:0033240"},{"relation_name":"is_a","term_name":"regulation of acetylcholine metabolic process","termid":"GO:0060408"},{"relation_name":"positively_regulates","term_name":"acetylcholine metabolic process","termid":"GO:0008291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of acetylcholine metabolic process","termid":"GO:0060409"}


id: PBO:0050919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IFITM3 pseudogene 2","termid":"PBO:0050919"}


id: PBO:0078908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon CTG) 17-1","termid":"PBO:0078908"}


id: PBO:0045658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dishevelled segment polarity protein 2","termid":"PBO:0045658"}


id: GO:0035371
data:
  {"annotated_genes":["SJAG_01613","SJAG_00723","SJAG_03540","SJAG_00030","SJAG_02761","SJAG_02336","SJAG_03052","SJAG_00851","SJAG_02045","SJAG_01196","SJAG_00113","SJAG_02695","SJAG_02624","SJAG_00140","SJAG_02040","SJAG_01297"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[63078,72453,81189,81747,101027,106474,121062],"is_not":false,"summary":null,"term":"GO:0035371"},{"annotations":[105562,97018,99385],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903754"},{"annotations":[104139,105701,115897,120529,98783,91434,102185],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904511"}]},"cv_name":"cellular_component","definition":"The growing (plus) end of a microtubule. In vitro, microtubules polymerize more quickly at the plus end than at the minus end. In vivo, microtubule growth occurs only at the plus end, and the plus end switches between periods of growth and shortening, a behavior known as dynamic instability.","definition_xrefs":["GOC:lb","GOC:bf","PMID:12700769","PMID:16643273"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule end","termid":"GO:1990752"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_00113":null,"SJAG_00140":null,"SJAG_00723":null,"SJAG_00851":null,"SJAG_01196":null,"SJAG_01297":null,"SJAG_01613":null,"SJAG_02040":null,"SJAG_02045":null,"SJAG_02336":null,"SJAG_02624":null,"SJAG_02695":null,"SJAG_02761":null,"SJAG_03052":null,"SJAG_03540":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0015630","GO:0005575"],"is_obsolete":false,"name":"microtubule plus-end","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null,"PMID:30726171":null},"synonyms":[{"name":"growing microtubule plus end","type":"exact"},{"name":"microtubule plus end","type":"exact"}],"termid":"GO:0035371","terms_by_termid":{"GO:0035371":null,"GO:1903754":null,"GO:1904511":null}}


id: PBO:0063706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglucomutase 1","termid":"PBO:0063706"}


id: GO:0100050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that negatively regulates mating type switching.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of mating type switching by transcription from RNA polymerase II promoter (obsolete GO:0100050)","termid":"GO:0100050"}


id: GO:0010952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of peptidase activity, the hydrolysis of peptide bonds within proteins.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of proteolysis","termid":"GO:0045862"},{"relation_name":"is_a","term_name":"positive regulation of hydrolase activity","termid":"GO:0051345"},{"relation_name":"is_a","term_name":"regulation of peptidase activity","termid":"GO:0052547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of peptidase activity","termid":"GO:0010952"}


id: GO:0097192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals in which a signal is conveyed from the cell surface to trigger the apoptotic death of a cell. The pathway starts with withdrawal of a ligand from a cell surface receptor, and ends when the execution phase of apoptosis is triggered.","definition_xrefs":["PMID:20816705","GOC:mtg_apoptosis","PMID:15044679"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction in absence of ligand","termid":"GO:0038034"},{"relation_name":"is_a","term_name":"extrinsic apoptotic signaling pathway","termid":"GO:0097191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"extrinsic apoptotic signaling pathway in absence of ligand","secondary_identifiers":["Reactome:R-HSA-418889"],"synonyms":[{"name":"dependence receptor signaling pathway","type":"related"},{"name":"extrinsic apoptosis in absence of ligand","type":"narrow"},{"name":"extrinsic apoptotic signalling pathway in absence of ligand","type":"exact"}],"termid":"GO:0097192"}


id: PBO:0002071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha,alpha-trehalose-phosphate synthase [UDP-forming]","termid":"PBO:0002071"}


id: FYPO:0005945
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which chromosomal truncation that would result in the loss of one of two different alleles of a gene occurs at a normal (i.e. indistinguishable from wild type) frequency.","definition_xrefs":["PMID:19798055","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal frequency of break-induced loss of heterozygosity","termid":"FYPO:0005945"}


id: PBO:0050494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox B4","termid":"PBO:0050494"}


id: PBO:0067326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 417, pseudogene","termid":"PBO:0067326"}


id: MONDO:0006497
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of disorders affecting the development of movement and posture, often accompanied by disturbances of sensation, perception, cognition, and behavior. It results from damage to the fetal or infant brain.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"neurodegenerative disease","termid":"MONDO:0005559"},{"relation_name":"is_a","term_name":"palsy","termid":"MONDO:0006496"},{"relation_name":"is_a","term_name":"cerebral cortex disorder","termid":"MONDO:0044996"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebral palsy","secondary_identifiers":["MEDGEN:854","UMLS:C0007789","HP:0100021","MESH:D002547","DOID:1969","CSP:0723-4729","ICD9:343.8","ICD9:343.9","EFO:1000632","ICD10CM:G80","NCIT:C34460","SCTID:128188000","icd11.foundation:76906748"],"synonyms":[{"name":"infantile cerebral palsy","type":"exact"}],"termid":"MONDO:0006497","xrefs":{"Monarch":{"xref_id":"0006497"}}}


id: GO:0007376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of a partial necklace of inturning tissue on the lateral sides of the embryo, along the dorsal-ventral axis. This furrow demarcates head from thorax in the developing protostome.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"gastrulation involving germ band extension","termid":"GO:0010004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cephalic furrow formation","termid":"GO:0007376"}


id: PBO:0083907
data:
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id: GO:1901427
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id: PBO:0073527
data:
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id: FYPO:0002057
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type"}]}]},"pka1delta":{"display_name":"pka1delta","display_uniquename":"pka1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04312:allele-1","expression":"Null"}]}]},"rad26delta":{"display_name":"rad26delta","display_uniquename":"rad26delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00429:allele-1","expression":"Null"}]}]},"rad3delta":{"display_name":"rad3delta","display_uniquename":"rad3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00364:allele-1","expression":"Null"}]}]},"ras1delta":{"display_name":"ras1delta","display_uniquename":"ras1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03453:allele-1","expression":"Null"}]}]},"rdp1delta":{"display_name":"rdp1delta","display_uniquename":"rdp1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03356:allele-1","expression":"Null"}]}]},"rip1delta":{"display_name":"rip1delta","display_uniquename":"rip1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00601:allele-1","expression":"Null"}]}]},"scd1delta":{"display_name":"scd1delta","display_uniquename":"scd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00514:allele-1","expression":"Null"}]}]},"scd2delta":{"display_name":"scd2delta","display_uniquename":"scd2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01794:allele-1","expression":"Null"}]}]},"sdh3delta":{"display_name":"sdh3delta","display_uniquename":"sdh3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03920:allele-1","expression":"Null"}]}]},"shc1delta":{"display_name":"shc1delta","display_uniquename":"shc1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03360:allele-1","expression":"Null"}]}]},"stc1delta":{"display_name":"stc1delta","display_uniquename":"stc1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02409:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]},"tel1delta":{"display_name":"tel1delta","display_uniquename":"tel1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03720:allele-1","expression":"Null"}]}]},"vps32delta":{"display_name":"vps32delta","display_uniquename":"vps32delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01242:allele-1","expression":"Null"}]}]},"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_02668","SJAG_03198","SJAG_01946","SJAG_04574","SJAG_03118","SJAG_03689","SJAG_03575","SJAG_02621"],"name":"cell 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viability","references_by_uniquename":{"PMID:23090706":null,"PMID:23786411":null,"PMID:24184107":null,"PMID:25318672":null,"PMID:26774782":null,"PMID:27678009":null,"PMID:28954740":null,"PMID:29566183":null,"PMID:30664646":null,"PMID:30726171":null,"PMID:31150379":null,"PMID:32109380":null,"PMID:32243490":null,"PMID:35226668":null,"PMID:36058798":null,"PMID:37164017":null,"PMID:37233261":null,"PMID:40195311":null},"single_locus_annotated_genes":["SJAG_02592","SJAG_00266","SJAG_01946","SJAG_02621","SJAG_05207","SJAG_03453","SJAG_00426","SJAG_04703","SJAG_00409","SJAG_04464","SJAG_02527","SJAG_02409","SJAG_01794","SJAG_01956","SJAG_00429","SJAG_03575","SJAG_03720","SJAG_01242","SJAG_03892","SJAG_04061","SJAG_01355","SJAG_03920","SJAG_00370","SJAG_01753","SJAG_04574","SJAG_03351","SJAG_00364","SJAG_03198","SJAG_02594","SJAG_04312","SJAG_03449","SJAG_02763","SJAG_03916","SJAG_00601","SJAG_00514","SJAG_04843","SJAG_03356","SJAG_03360","SJAG_04697","SJAG_03689"],"single_locus_genotype_uniquenames":["oar2delta","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","vps4delta","pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","cmp7delta","atf1delta","bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","shc1delta","rip1delta","rdp1delta","erg1delta","mdh1delta","fum1delta","scd1delta","gpd1delta","sty1delta","dcr1delta","man1delta","oar2-dm12-R72A,L75A,R106A,L109A-amino_acid_mutation-expression-overexpression","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","chp1delta","lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","tel1delta","for3delta","ras1delta","oar2-51-Y189D_cold_sensitive-amino_acid_mutation-expression-overexpression","vps32delta","rad3delta","stc1delta","pka1delta","scd2delta","cem1delta","clr4delta","arb1delta","ned1delta","ago1delta","rad26delta","sdh3delta","gms1delta","cox6delta","arb2delta"],"termid":"FYPO:0002057","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000103":null,"FYECO:0000117":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000315":null,"FYPO:0000080":null,"FYPO:0000082":null,"FYPO:0000245":null,"FYPO:0000674":null,"FYPO:0001234":null,"FYPO:0001355":null,"FYPO:0001357":null,"FYPO:0001387":null,"FYPO:0001408":null,"FYPO:0001419":null,"FYPO:0001690":null,"FYPO:0002058":null,"FYPO:0002061":null,"FYPO:0004481":null,"FYPO:0004693":null,"FYPO:0005231":null,"FYPO:0005705":null,"FYPO:0005883":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: PBO:0068891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 132, pseudogene","termid":"PBO:0068891"}


id: PBO:0084054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein for yeast Rab family members; Ypt1p is the preferred in vitro substrate but also acts on Sec4p, Ypt31p and Ypt32p; involved in the regulation of ER to Golgi vesicle transport","termid":"PBO:0084054"}


id: MONDO:0008697
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acetophenetidin sensitivity (obsolete MONDO:0008697)","secondary_identifiers":["OMIM:200300"],"synonyms":[{"name":"Acetophenetidin sensitivity","type":"exact"}],"termid":"MONDO:0008697","xrefs":{"Monarch":{"xref_id":"0008697"}}}


id: GO:0007625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specific behavior of an organism relating to grooming, cleaning and brushing to remove dirt and parasites.","definition_xrefs":["GOC:pr","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"grooming behavior","synonyms":[{"name":"grooming behaviour","type":"exact"}],"termid":"GO:0007625"}


id: GO:1990470
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to piRNA clusters, double-stranded DNA regions that give rise to PIWI-interacting RNAs (piRNAs).","definition_xrefs":["PMID:24906153","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence-specific double-stranded DNA binding","termid":"GO:1990837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0005488","GO:0003677","GO:0003674"],"is_obsolete":false,"name":"piRNA cluster binding","termid":"GO:1990470"}


id: MONDO:0007446
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign skin condition commonly seen in dark-skinned individuals that is characterized by multiple small hyperpigmented papular lesions resembling seborrheic keratosis on the face and upper body.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatitis","termid":"MONDO:0002406"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"dermatosis papulosa nigra","secondary_identifiers":["EFO:1000686","UMLS:C0011645","icd11.foundation:168986957","MESH:C562379","DOID:4400","ICD9:709.8","NCIT:C2984","MEDGEN:4238","OMIM:125600","SCTID:254669003","ICD10CM:L82","Wikipedia:Dermatosis_papulosa_nigra"],"synonyms":[{"name":"dermatosis papulosa nigra","type":"exact"},{"name":"dermatosis papulosa nigra (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0007446","xrefs":{"Monarch":{"xref_id":"0007446"}}}


id: GO:0032933
data:
  {"annotated_genes":["SJAG_04018","SJAG_03345","SJAG_01585","SJAG_04151","SJAG_03501","SJAG_00642","SJAG_02682","SJAG_00718","SJAG_05304","SJAG_04573","SJAG_02104","SJAG_01632","SJAG_02703","SJAG_05286","SJAG_04384","SJAG_01253","SJAG_00293","SJAG_01307","SJAG_01657","SJAG_03302","SJAG_03568","SJAG_01150"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[64740,66040,70475,90799,91080,91468,94456,95700,103929,105794,114423,114676,118253,120103,120322],"is_not":false,"summary":null,"term":"GO:0032933"},{"annotations":[107726,113567,93053],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:2000639"},{"annotations":[115297,80170,62292,115296],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:2000640"}]},"cv_name":"biological_process","definition":"The series of molecular signals from the endoplasmic reticulum to the nucleus generated as a consequence of decreased levels of one or more sterols (and in some yeast, changes in oxygen levels) and which proceeds through activation of a sterol response element binding transcription factor (SREBP) to result in up-regulation of target gene transcription.","definition_xrefs":["PMID:22017871","GOC:vw","GOC:bf","PMID:12923525","GOC:mah","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ER-nucleus signaling pathway","termid":"GO:0006984"},{"relation_name":"is_a","term_name":"cellular response to sterol depletion","termid":"GO:0071501"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00293":null,"SJAG_00642":null,"SJAG_00718":null,"SJAG_01150":null,"SJAG_01253":null,"SJAG_01307":null,"SJAG_01585":null,"SJAG_01632":null,"SJAG_01657":null,"SJAG_02104":null,"SJAG_02682":null,"SJAG_02703":null,"SJAG_03302":null,"SJAG_03345":null,"SJAG_03501":null,"SJAG_03568":null,"SJAG_04018":null,"SJAG_04151":null,"SJAG_04384":null,"SJAG_04573":null,"SJAG_05286":null,"SJAG_05304":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"SREBP signaling pathway","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0006994","GO:0030967","GO:0035104"],"synonyms":[{"name":"ER to nucleus sterol response pathway","type":"exact"},{"name":"ER-nuclear sterol response pathway","type":"exact"},{"name":"SREBP signalling","type":"exact"},{"name":"SREBP target gene transcriptional activation","type":"exact"},{"name":"SREBP-mediated signaling pathway","type":"related"},{"name":"SREBP-mediated signalling pathway","type":"exact"},{"name":"activation of sterol regulatory element binding protein target gene transcription","type":"narrow"},{"name":"endoplasmic reticulum to nucleus sterol response pathway","type":"exact"},{"name":"endoplasmic reticulum-nuclear sterol response pathway","type":"exact"},{"name":"positive regulation of sterol regulatory element binding protein target gene transcription","type":"exact"},{"name":"positive regulation of sterol regulatory element binding protein target gene transcription involved in sterol depletion response","type":"exact"},{"name":"positive regulation of transcription via sterol regulatory element binding","type":"narrow"},{"name":"positive regulation of transcription via sterol regulatory element binding involved in ER-nuclear sterol response pathway","type":"narrow"},{"name":"sterol depletion response, SREBP target gene transcriptional activation","type":"exact"},{"name":"sterol regulatory element binding protein target gene transcriptional activation","type":"broad"},{"name":"sterol response element binding protein signaling pathway","type":"exact"},{"name":"stimulation of sterol regulatory element binding protein target gene transcription","type":"narrow"},{"name":"up regulation of sterol regulatory element binding protein target gene transcription","type":"exact"},{"name":"up-regulation of sterol regulatory element binding protein target gene transcription","type":"exact"},{"name":"upregulation of sterol regulatory element binding protein target gene transcription","type":"exact"}],"termid":"GO:0032933","terms_by_termid":{"GO:0032933":null,"GO:2000639":null,"GO:2000640":null}}


id: PBO:0054468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1867","termid":"PBO:0054468"}


id: GO:1901247
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of lung ciliated cell differentiation.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell differentiation","termid":"GO:0030857"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of lung ciliated cell differentiation","termid":"GO:1901246"},{"relation_name":"negatively_regulates","term_name":"lung ciliated cell differentiation","termid":"GO:0061141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lung ciliated cell differentiation","synonyms":[{"name":"down regulation of lung ciliated cell differentiation","type":"exact"},{"name":"down-regulation of lung ciliated cell differentiation","type":"exact"},{"name":"downregulation of lung ciliated cell differentiation","type":"exact"},{"name":"inhibition of lung ciliated cell differentiation","type":"narrow"}],"termid":"GO:1901247"}


id: _global:recombined_from
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recombined_from","termid":"_global:recombined_from"}


id: GO:0043947
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of symbiont enzyme activity. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by host of symbiont catalytic activity (obsolete GO:0043947)","synonyms":[{"name":"activation by host of symbiont enzyme activity","type":"narrow"},{"name":"activation of symbiont enzyme activity","type":"narrow"},{"name":"positive regulation by host of symbiont enzyme activity","type":"exact"},{"name":"up regulation by host of symbiont enzyme activity","type":"exact"},{"name":"up-regulation by host of symbiont enzyme activity","type":"exact"},{"name":"upregulation by host of symbiont enzyme activity","type":"exact"}],"termid":"GO:0043947"}


id: GO:1901501
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a xylene stimulus.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to xylene","termid":"GO:1901501"}


id: GO:0102615
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ent-cassa-12,15-diene + NADPH + O2 + H+ = 2alpha-hydroxy-ent-cassadiene + NADP + H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete ent-cassadiene-C2-hydroxylase activity (obsolete GO:0102615)","termid":"GO:0102615"}


id: MONDO:0014226
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare primary immunodeficiency disorder characterized by persistent CD4 T-cell lymphopenia (less than 300 cells/B5L on multiple occasions) not associated with any other underlying primary or secondary immune deficiency. Patients typically present opportunistic infections (with cryptococcal, mycobacterial, candidal, varicella zoster virus infections and progressive multifocal leukoencephalopathy being the most prevalent), malignancies (mainly lymphoproliferative disorders), or autoimmune disorders. Some individuals are asymptomatic and incidentally diagnosed.","definition_xrefs":["Orphanet:228000"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"non-SCID combined immunodeficiency","termid":"MONDO:0018814"},{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"idiopathic CD4 lymphocytopenia","secondary_identifiers":["MEDGEN:816098","icd11.foundation:1639000446","OMIM:615518","GARD:12375","SCTID:763713000","UMLS:C3809768","DOID:0111987"],"synonyms":[{"name":"ICL","type":"related"},{"name":"IMD13","type":"related"},{"name":"idiopathic CD4 positive T-lymphocytopenia","type":"related"},{"name":"idiopathic Cd4 lymphopenia","type":"related"},{"name":"immunodeficiency 13","type":"related"},{"name":"immunodeficiency type 13","type":"exact"}],"termid":"MONDO:0014226","xrefs":{"Monarch":{"xref_id":"0014226"}}}


id: GO:0002736
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of plasmacytoid dendritic cell cytokine production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of dendritic cell cytokine production","termid":"GO:0002730"},{"relation_name":"regulates","term_name":"plasmacytoid dendritic cell cytokine production","termid":"GO:0002373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of plasmacytoid dendritic cell cytokine production","termid":"GO:0002736"}


id: PR:Q9USM8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atg20 gene.","definition_xrefs":["UniProtKB:Q9USM8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy-related protein 20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16A11.08","synonyms":[{"name":"Spom972h-atg20","type":"exact"}],"termid":"PR:Q9USM8"}


id: PBO:0030482
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-ferrichrome_absent_from_cell","termid":"PBO:0030482"}


id: GO:1900635
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving heptadecane.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkane metabolic process","termid":"GO:0043446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heptadecane metabolic process","synonyms":[{"name":"heptadecane metabolism","type":"exact"}],"termid":"GO:1900635"}


id: MONDO:0005382
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease of bone that initially results in the excessive resorption of bone (by osteoclasts) followed by the replacement of normal bone marrow with vascular and fibrous tissue.","definition_xrefs":["NCIT:C3292"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperostosis","termid":"MONDO:0002185"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"metabolic bone disorder","termid":"MONDO:0800486"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone Paget disease","secondary_identifiers":["SCTID:2089002","MEDGEN:10493","DOID:5408","OMIMPS:167250","Orphanet:280110","UMLS:C0029401","ICD10CM:M88","EFO:0004261"],"synonyms":[{"name":"Paget disease of bone","type":"exact"},{"name":"Paget's bone disease","type":"exact"},{"name":"Paget's disease","type":"related"},{"name":"Paget's disease of bone","type":"exact"},{"name":"Paget's disease of the bone","type":"exact"},{"name":"Pagets disease (bone)","type":"exact"},{"name":"bone Paget disease","type":"exact"},{"name":"bone Paget's disease","type":"exact"},{"name":"familial Paget's disease of bone","type":"related"},{"name":"osseous Paget's disease","type":"exact"},{"name":"osteitis deformans","type":"exact"}],"termid":"MONDO:0005382","xrefs":{"Monarch":{"xref_id":"0005382"}}}


id: PBO:0110035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IDH1 pseudogene 1","termid":"PBO:0110035"}


id: PR:000028951
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peroxiredoxin tpx1 complex in Schizosaccharomyces pombe.","definition_xrefs":["PRO:CNA","PMID:22245228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxiredoxin tpx1","termid":"PR:000028932"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tpx1/HyperOx(C48) dimer","synonyms":[{"name":"PomBase_original_PRO_term_name: peroxiredoxin tpx1 complex (Schizosaccharomyces pombe)","type":"exact"},{"name":"tpx1/HyperOx(C48) dimer","type":"exact"}],"termid":"PR:000028951"}


id: PR:Q09903
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ddx27 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09903"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase drs1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC30D11.03","synonyms":[{"name":"Spom972h-ddx27","type":"exact"}],"termid":"PR:Q09903"}


id: MONDO:0000438
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ataxia with oculomotor apraxia type 2 (obsolete MONDO:0000438)","termid":"MONDO:0000438","xrefs":{"Monarch":{"xref_id":"0000438"}}}


id: GO:1904270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a pyroptosome complex.","definition_xrefs":["PMID:17964261","GOC:TermGenie","GO_REF:0000079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"pyroptosome complex assembly","synonyms":[{"name":"ASC pyroptosome assembly","type":"exact"},{"name":"ASC pyroptosome formation","type":"exact"},{"name":"pyroptosome complex formation","type":"exact"}],"termid":"GO:1904270"}


id: GO:1990797
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The controlled release of cholecystokinin from a cell. Cholecystokinin is a peptide hormone that participates in pancreatic enzyme release in the gut and is also found in the brain.","definition_xrefs":["PMID:2755938"],"gene_count":0,"genotype_count":0,"name":"obsolete cholecystokinin secretion (obsolete GO:1990797)","synonyms":[{"name":"CCK secretion","type":"exact"}],"termid":"GO:1990797"}


id: MONDO:0000160
data:
  {"annotated_genes":["SJAG_03657","SJAG_03042"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89018],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013322"},{"annotations":[88184],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054846"}]},"cv_name":"mondo","definition":"An epilepsy syndrome characterized by adult-onset cortical myoclonus typically first seen as tremulous finger movements and myoclonus of the extremities.","definition_xrefs":["DOID:0111689"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"},{"relation_name":"is_a","term_name":"myoclonic epilepsy","termid":"MONDO:0100577"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03042":null,"SJAG_03657":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"epilepsy, familial adult myoclonic","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:601068"],"termid":"MONDO:0000160","terms_by_termid":{"MONDO:0013322":null,"MONDO:0054846":null},"xrefs":{"Monarch":{"xref_id":"0000160"}}}


id: PBO:0040538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,3-galactosyltransferase 5","termid":"PBO:0040538"}


id: PBO:0003027
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.1.4","termid":"PBO:0003027"}


id: PBO:0116974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADORA1 antisense RNA 2","termid":"PBO:0116974"}


id: PBO:0030226
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_tacrolimus_during_osmotic_stress","termid":"PBO:0030226"}


id: MONDO:0004709
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm involving a occipital lobe.","definition_xrefs":["MONDO:patterns/neoplasm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm of cerebral hemisphere","termid":"MONDO:0021374"},{"relation_name":"is_a","term_name":"cerebral cortex disorder","termid":"MONDO:0044996"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"occipital lobe neoplasm","secondary_identifiers":["NCIT:C5574","DOID:910","MEDGEN:220389","SCTID:126957005","UMLS:C1263889","ICD9:191.4","ICD10CM:C71.4"],"synonyms":[{"name":"malignant neoplasm of occipital lobe","type":"exact"},{"name":"neoplasm of occipital lobe","type":"exact"},{"name":"neoplasm of the occipital lobe","type":"exact"},{"name":"occipital lobe neoplasm","type":"exact"},{"name":"occipital lobe neoplasm (disease)","type":"exact"},{"name":"occipital lobe tumor","type":"exact"},{"name":"occipital lobe tumour","type":"exact"},{"name":"tumor of occipital lobe","type":"exact"},{"name":"tumor of the occipital lobe","type":"exact"},{"name":"tumour of occipital lobe","type":"exact"},{"name":"tumour of the occipital lobe","type":"exact"}],"termid":"MONDO:0004709","xrefs":{"Monarch":{"xref_id":"0004709"}}}


id: MONDO:8000003
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Discitis caused by infection with Streptococcus pneumoniae.","definition_xrefs":["PMID:27070599"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial arthritis","termid":"MONDO:0004471"},{"relation_name":"is_a","term_name":"pneumococcal infection","termid":"MONDO:0005114"},{"relation_name":"is_a","term_name":"infectious discitis","termid":"MONDO:8000000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"streptococcus pneumoniae discitis","termid":"MONDO:8000003","xrefs":{"Monarch":{"xref_id":"8000003"}}}


id: PBO:0062122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily C member 50 pseudogene","termid":"PBO:0062122"}


id: PR:P40375
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An NAD-dependent malic enzyme that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04249","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD-dependent malic enzyme (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC794.12c","secondary_identifiers":["UniProtKB:P40375"],"synonyms":[{"name":"NAD-ME (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-maeA","type":"exact"}],"termid":"PR:P40375"}


id: SO:0001679
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A regulatory region that is involved in the control of the process of transcription.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0001679 transcription_regulatory_region (obsolete SO:0001679)","synonyms":[{"name":"transcription regulatory region","type":"exact"}],"termid":"SO:0001679"}


id: MONDO:0002114
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lymphoma that arises from the pancreas with the bulk of the tumor localized to this organ. The vast majority of cases are non-Hodgkin lymphomas of B-cell phenotype and include mucosa-associated lymphoid tissue lymphomas, follicular lymphomas, and diffuse large B-cell lymphomas.","definition_xrefs":["NCIT:C5714"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastrointestinal lymphoma","termid":"MONDO:0004699"},{"relation_name":"is_a","term_name":"malignant pancreatic neoplasm","termid":"MONDO:0009831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"pancreas lymphoma","secondary_identifiers":["DOID:1792","MEDGEN:233304","UMLS:C1335307"],"synonyms":[{"name":"lymphoma of pancreas","type":"exact"},{"name":"lymphoma of the pancreas","type":"exact"},{"name":"pancreas lymphoma","type":"exact"},{"name":"pancreatic lymphoma","type":"exact"}],"termid":"MONDO:0002114","xrefs":{"Monarch":{"xref_id":"0002114"}}}


id: GO:0004127
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + (d)CMP = ADP + (d)CDP.","definition_xrefs":["GOC:rynl"],"gene_count":0,"genotype_count":0,"name":"obsolete (d)CMP kinase activity (obsolete GO:0004127)","termid":"GO:0004127"}


id: MONDO:0011333
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete light fixation seizure syndrome (obsolete MONDO:0011333)","termid":"MONDO:0011333","xrefs":{"Monarch":{"xref_id":"0011333"}}}


id: MONDO:0017411
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neonatal inflammatory skin and bowel disease is a rare, life-threatening, autoinflammatory syndrome with immune deficiency disorder characterized by early-onset, life-long inflammation, affecting the skin and bowel, associated with recurrent infections. Patients present perioral and perianal psoriasiform erythema and papular eruption with pustules, failure to thrive associated with chronic malabsorptive diarrhea, intercurrent gastrointestinal infections and feeding troubles, as well as absent, short or broken hair and trichomegaly. Recurrent cutaneous and pulmonary infections lead to recurrent blepharitis, otitis externa and bronchiolitis.","definition_xrefs":["Orphanet:294023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"},{"relation_name":"is_a","term_name":"epidermal disease","termid":"MONDO:0019268"},{"relation_name":"is_a","term_name":"autoinflammatory syndrome","termid":"MONDO:0019751"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046","MONDO:0005093"],"is_obsolete":false,"name":"neonatal inflammatory skin and bowel disease","secondary_identifiers":["MEDGEN:1648296","OMIMPS:614328","GARD:17355","UMLS:C4751120"],"synonyms":[{"name":"inflammatory skin and bowel disease, neonatal","type":"exact"}],"termid":"MONDO:0017411","xrefs":{"Monarch":{"xref_id":"0017411"}}}


id: GO:0140806
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-aspartyl-[protein] + NAD+ = 4-O-(ADP-D-ribosyl)-L-aspartyl-[protein] + nicotinamide.","definition_xrefs":["RHEA:54424","PMID:19764761","PMID:25043379"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD+-protein mono-ADP-ribosyltransferase activity","termid":"GO:1990404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016740","GO:0140096","GO:0016757","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"NAD+-protein-aspartate ADP-ribosyltransferase activity","termid":"GO:0140806"}


id: PBO:0084152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High affinity nicotinic acid plasma membrane permease; responsible for uptake of low levels of nicotinic acid; expression of the gene increases in the absence of extracellular nicotinic acid or para-aminobenzoate (PABA)","termid":"PBO:0084152"}


id: PBO:0057168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 320d-2","termid":"PBO:0057168"}


id: GO:0018695
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-cresol + acceptor + H2O = 4-hydroxybenzaldehyde + reduced acceptor.","definition_xrefs":["EC:1.17.9.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups","termid":"GO:0016725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"4-cresol dehydrogenase (hydroxylating) activity","secondary_identifiers":["UM-BBD_reactionID:r0272","MetaCyc:1.17.99.1-RXN","RHEA:15141"],"synonyms":[{"name":"4-cresol dehydrogenase activity","type":"exact"},{"name":"4-cresol:acceptor oxidoreductase (methyl-hydroxylating)","type":"related"},{"name":"p-cresol methylhydroxylase activity","type":"related"},{"name":"p-cresol-(acceptor) oxidoreductase (hydroxylating) activity","type":"related"}],"termid":"GO:0018695"}


id: PBO:0077412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM147 antisense RNA 1","termid":"PBO:0077412"}


id: GO:0055112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The splitting or migration of one epithelial sheet into two involved in the process of deuterostomic gastrulation.","definition_xrefs":["ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delamination","termid":"GO:0060232"},{"relation_name":"part_of","term_name":"gastrulation with mouth forming second","termid":"GO:0001702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"delamination involved in gastrulation with mouth forming second","termid":"GO:0055112"}


id: PBO:0061188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear-encoded mitochondrial tRNA-Ser (TGA) 3-1","termid":"PBO:0061188"}


id: PBO:0005140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase activating protein Gyp3 (predicted)","termid":"PBO:0005140"}


id: MONDO:0008269
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polydactyly of a biphalangeal thumb or PPD1 is the most common form of preaxial polydactyly of fingers, a limb malformation syndrome, that is characterized by the duplication of one or more skeletal components of a biphalangeal thumb. Hands are preferentially affected (in bilateral), and the right hand is more commonly involved than the left.","definition_xrefs":["Orphanet:93339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"preaxial polydactyly of fingers","termid":"MONDO:0017425"},{"relation_name":"is_a","term_name":"polydactyly-syndactyly-triphalangism","termid":"MONDO:0800066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polydactyly of a biphalangeal thumb","secondary_identifiers":["SCTID:445216006","OMIM:174400","UMLS:C1395852","MESH:C536332","MEDGEN:237235","GARD:4417"],"synonyms":[{"name":"Fromont anomaly","type":"related"},{"name":"PPD1","type":"exact"},{"name":"polydactyly preaxial 1","type":"related"},{"name":"polydactyly, preaxial 1","type":"related"},{"name":"polydactyly, preaxial I","type":"related"},{"name":"polydactyly, preaxial type 1","type":"exact"},{"name":"preaxial polydactyly 1","type":"related"},{"name":"preaxial polydactyly type 1","type":"exact"},{"name":"thenar hypoplasia","type":"related"},{"name":"thumb polydactyly","type":"related"}],"termid":"MONDO:0008269","xrefs":{"Monarch":{"xref_id":"0008269"}}}


id: FYPO:0001967
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of 1,3-beta-D-glucan synthase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal glucosyltransferase activity","termid":"FYPO:0001087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000707","FYPO:0000661","FYPO:0000654"],"is_obsolete":false,"name":"abnormal 1,3-beta-D-glucan synthase activity","termid":"FYPO:0001967"}


id: PBO:0043612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COMM domain containing 4","termid":"PBO:0043612"}


id: PBO:0087746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the telomeric Ku complex (Yku70p-Yku80p); involved in telomere length maintenance, structure and telomere position effect; required for localization of telomerase ribonucleoprotein to nucleus via interaction with the TLC1 guide RNA; relocates to sites of double-strand cleavage to promote nonhomologous end joining during DSB repair","termid":"PBO:0087746"}


id: PBO:0085027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nitrogen catabolite repression transcriptional regulator; inhibits GLN3 transcription in good nitrogen source; role in sequestering Gln3p and Gat1p to the cytoplasm; has glutathione peroxidase activity and can mutate to acquire GST activity; self-assembly under limited nitrogen conditions creates [URE3] prion and releases catabolite repression","termid":"PBO:0085027"}


id: PBO:0090768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial complex III assembly protein Cbp6","termid":"PBO:0090768"}


id: PR:Q9P7M4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAP27G11.14c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7M4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein SPAP27G11.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP27G11.14c","synonyms":[{"name":"Spom972h-SPAP27G11.14c","type":"exact"}],"termid":"PR:Q9P7M4"}


id: PBO:0027545
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitochondrial_motility","termid":"PBO:0027545"}


id: PBO:0071494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 35","termid":"PBO:0071494"}


id: GO:0039662
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A lipid bilayer that forms the outermost layer of the cell envelope, occurring in a host cell.","definition_xrefs":["GOC:bf","GOC:ch"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host outer membrane","termid":"GO:0044384"},{"relation_name":"part_of","term_name":"host cell envelope","termid":"GO:0044230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell outer membrane","synonyms":[{"name":"host cell envelope outer membrane","type":"exact"},{"name":"outer membrane of host cell","type":"exact"}],"termid":"GO:0039662"}


id: PBO:0089753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine methyltransferase Set8, unknown specificity","termid":"PBO:0089753"}


id: GO:0102811
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geraniol + O2 + NADPH + H+ = (6E)-8-hydroxygeraniol + NADP + H2O.","definition_xrefs":["EC:1.14.14.83","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"geraniol 10-hydroxylase activity","secondary_identifiers":["RHEA:32495","MetaCyc:RXN-8197"],"termid":"GO:0102811"}


id: SO:0000757
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA synthesized from RNA by reverse transcriptase, single stranded.","direct_ancestors":[{"relation_name":"is_a","term_name":"cDNA","termid":"SO:0000756"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"single_stranded_cDNA","synonyms":[{"name":"single strand cDNA","type":"exact"},{"name":"single stranded cDNA","type":"exact"},{"name":"single-strand cDNA","type":"related"}],"termid":"SO:0000757"}


id: GO:0044816
data:
  {"annotated_genes":["SJAG_01370"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[92802],"is_not":false,"summary":null,"term":"GO:0044816"}]},"cv_name":"cellular_component","definition":"A dimer of Nsk1 (nucleolus spindle kinetochore 1) and the dynein light chain, Dlc1. The dimers form an oligomeric chain structure. Functions in the regulation of kinetochore-microtubule interactions and chromosome segregation.","definition_xrefs":["GOC:vw","PMID:22065639"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01370":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Nsk1-Dlc1 complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0044816","terms_by_termid":{"GO:0044816":null}}


id: PATO:0001515
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color quality inhering in a bearer by virtue of the bearer's being uneven in color.","definition_xrefs":["PATOC:NC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color pattern","termid":"PATO:0000019"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variable color","synonyms":[{"name":"murky","type":"related"}],"termid":"PATO:0001515"}


id: FYPO:0002553
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which double-strand break processing is abnormal. Double-strand break processing is the 5' to 3' exonucleolytic resection of the DNA at the site of the break to form a 3' single-strand DNA overhang.","definition_xrefs":["GO:0000729","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal double-strand break repair during vegetative growth","termid":"FYPO:0000777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000298","FYPO:0001985","FYPO:0000293","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abnormal double-strand break processing","synonyms":[{"name":"abnormal DSB processing","type":"exact"},{"name":"abnormal double-strand break processing during mitotic cell cycle","type":"related"},{"name":"abnormal double-strand break processing during vegetative growth","type":"exact"}],"termid":"FYPO:0002553"}


id: PBO:0081830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 764","termid":"PBO:0081830"}


id: PBO:0016570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stomatin, mitochondrial membrane organization protein (predicted)","termid":"PBO:0016570"}


id: PBO:0053874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1150","termid":"PBO:0053874"}


id: PBO:0087799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Synthase subunit of trehalose-6-P synthase/phosphatase complex; synthesizes the storage carbohydrate trehalose, which is critically important for survival of long-term desiccation; also found in a monomeric form; expression is induced by the stress response and repressed by the Ras-cAMP pathway; protein abundance increases in response to DNA replication stress and in response to prolonged exposure to boric acid","termid":"PBO:0087799"}


id: MONDO:0013072
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant Emery-Dreifuss muscular dystrophy in which the cause of the disease is a mutation in the SYNE2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant Emery-Dreifuss muscular dystrophy","termid":"MONDO:0020336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005267","MONDO:0005336"],"is_obsolete":false,"name":"Emery-Dreifuss muscular dystrophy 5, autosomal dominant","secondary_identifiers":["UMLS:C2751805","MEDGEN:414111","OMIM:612999","DOID:0070250","GARD:18207"],"synonyms":[{"name":"EDMD5","type":"related"},{"name":"EMERY-Dreifuss muscular dystrophy 5, autosomal dominant","type":"related"},{"name":"Emery-Dreifuss muscular dystrophy 5, autosomal dominant","type":"exact"},{"name":"SYNE2 autosomal dominant Emery-Dreifuss muscular dystrophy","type":"exact"},{"name":"autosomal dominant Emery-Dreifuss muscular dystrophy caused by mutation in SYNE2","type":"exact"}],"termid":"MONDO:0013072","xrefs":{"Monarch":{"xref_id":"0013072"}}}


id: GO:0072756
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a paraquat stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"response to paraquat","termid":"GO:1901562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to paraquat","termid":"GO:0072756"}


id: MONDO:0005218
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete muscular disorder (obsolete MONDO:0005218)","termid":"MONDO:0005218","xrefs":{"Monarch":{"xref_id":"0005218"}}}


id: GO:0140409
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mRNA alternative polyadenylation.","definition_xrefs":["PMID:29507755"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mRNA 3'-end processing","termid":"GO:0031442"},{"relation_name":"is_a","term_name":"regulation of mRNA alternative polyadenylation","termid":"GO:0140408"},{"relation_name":"positively_regulates","term_name":"mRNA alternative polyadenylation","termid":"GO:0110104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"positively_regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0016071"],"is_obsolete":false,"name":"positive regulation of mRNA alternative polyadenylation","termid":"GO:0140409"}


id: PBO:0039074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-acylglycerol-3-phosphate O-acyltransferase 2","termid":"PBO:0039074"}


id: MONDO:0016035
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome that develops following bilateral adrenalectomy for Cushing syndrome. The signs and symptoms result from the presence of an adenocorticotropin-secreting pituitary gland adenoma, and include enlargement of the sella turcica and pressure on the adjacent structures, and skin hyperpigmentation.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"functioning pituitary gland adenoma","termid":"MONDO:0003429"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nelson syndrome","secondary_identifiers":["DOID:4968","NORD:1492","NCIT:C84917","MEDGEN:342174","UMLS:C1852159","MESH:D009347","SCTID:43019009","ICD10CM:E24.1","MedDRA:10028913","GARD:7170","MESH:C531754","icd11.foundation:1945677910","Orphanet:199244"],"synonyms":[{"name":"Nelson's syndrome","type":"exact"},{"name":"Ridges-off-the-end syndrome","type":"related"},{"name":"dermal Ridges","type":"related"}],"termid":"MONDO:0016035","xrefs":{"Monarch":{"xref_id":"0016035"}}}


id: GO:0015955
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways by which a pyrimidine deoxyribonucleotide is synthesized from another pyrimidine deoxyribonucleotide.","definition_xrefs":["ISBN:0306444747","ISBN:0471394831","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide metabolic process","termid":"GO:0009219"},{"relation_name":"is_a","term_name":"pyrimidine nucleotide interconversion","termid":"GO:0015953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"pyrimidine deoxyribonucleotide interconversion","termid":"GO:0015955"}


id: GO:1904170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of bleb assembly.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:als","PMID:25651887"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120032"},{"relation_name":"regulates","term_name":"bleb assembly","termid":"GO:0032060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of bleb assembly","synonyms":[{"name":"regulation of cell blebbing","type":"exact"}],"termid":"GO:1904170"}


id: PBO:0049787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 22 (gene/pseudogene)","termid":"PBO:0049787"}


id: PBO:0053245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM homeobox 1","termid":"PBO:0053245"}


id: MONDO:0060761
data:
  {"annotated_genes":["SJAG_03812"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88204],"is_not":false,"summary":null,"term":"MONDO:0060761"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03812":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with epilepsy and hypoplasia of the corpus callosum","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1648487","OMIM:618090","UMLS:C4748137"],"synonyms":[{"name":"NEDEHCC","type":"related"},{"name":"neurodevelopmental disorder with epilepsy and hypoplasia of the corpus callosum","type":"exact"}],"termid":"MONDO:0060761","terms_by_termid":{"MONDO:0060761":null},"xrefs":{"Monarch":{"xref_id":"0060761"}}}


id: PBO:0001134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S16 (predicted)","termid":"PBO:0001134"}


id: GO:0160138
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: uridine(2604) in 23S rRNA = pseudouridine(2604) in 23S rRNA.","definition_xrefs":["RHEA:38875","EC:5.4.99.21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA pseudouridine synthase activity","termid":"GO:0120159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0140098","GO:0016853"],"is_obsolete":false,"name":"23S rRNA pseudouridine(2604) synthase activity","termid":"GO:0160138"}


id: PBO:0074060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 38","termid":"PBO:0074060"}


id: GO:1901072
data:
  {"annotated_genes":["SJAG_00620"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[68447],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006032"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glucosamine-containing compounds (glucosamines).","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino sugar catabolic process","termid":"GO:0046348"},{"relation_name":"is_a","term_name":"glucosamine-containing compound metabolic process","termid":"GO:1901071"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00620":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glucosamine-containing compound catabolic process","references_by_uniquename":{"GO_REF:0000043":null},"synonyms":[{"name":"glucosamine-containing compound breakdown","type":"exact"},{"name":"glucosamine-containing compound catabolism","type":"exact"},{"name":"glucosamine-containing compound degradation","type":"exact"},{"name":"glucosamines breakdown","type":"exact"},{"name":"glucosamines catabolic process","type":"exact"},{"name":"glucosamines catabolism","type":"exact"},{"name":"glucosamines degradation","type":"exact"}],"termid":"GO:1901072","terms_by_termid":{"GO:0006032":null}}


id: MONDO:0013382
data:
  {"annotated_genes":["SJAG_00835"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88835],"is_not":false,"summary":null,"term":"MONDO:0013382"}]},"cv_name":"mondo","definition":"Progressive polyneuropathy with bilateral striatal necrosis is a rare, genetic disorder of thiamine metabolism and transport characterized by the childhood-onset of recurrent episodes of flaccid paralysis and encephalopathy, associated with bilateral striatal necrosis and chronic progressive axonal polyneuropathy with proximal and distal muscle weakness, areflexia, contractures and foot deformities.","definition_xrefs":["Orphanet:217396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiamine-responsive dysfunction syndrome","termid":"MONDO:0000152"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00835":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005244"],"is_obsolete":false,"name":"progressive demyelinating neuropathy with bilateral striatal necrosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:462323","UMLS:C3150973","GARD:17123","OMIM:613710"],"synonyms":[{"name":"THMD4","type":"related"},{"name":"bilateral striatal Degeneration and progressive polyneuropathy","type":"related"},{"name":"progressive polyneuropathy with bilateral striatal necrosis","type":"related"},{"name":"striatal Necrosis, bilateral, and progressive polyneuropathy","type":"related"},{"name":"thiamine metabolism dysfunction syndrome 4 (bilateral striatal degeneration and progressive polyneuropathy type)","type":"related"},{"name":"thiamine metabolism dysfunction syndrome 4 (progressive polyneuropathy type)","type":"exact"}],"termid":"MONDO:0013382","terms_by_termid":{"MONDO:0013382":null},"xrefs":{"Monarch":{"xref_id":"0013382"}}}


id: FYPO:0008395
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to ferrous iron ions. Cells stop growing (and may die) at a concentration of iron ions that allows wild type cells to grow.","definition_xrefs":["PMID:35657410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to iron","termid":"FYPO:0005825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002683","FYPO:0000003","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to ferrous iron","termid":"FYPO:0008395"}


id: PBO:0117121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 67 member 1","termid":"PBO:0117121"}


id: MONDO:0030281
data:
  {"annotated_genes":["SJAG_03379"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88317],"is_not":false,"summary":null,"term":"MONDO:0030281"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"arthrogryposis multiplex congenita","termid":"MONDO:0015168"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03379":null},"genotype_count":0,"is_obsolete":false,"name":"arthrogryposis multiplex congenita 6","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:619334","MEDGEN:1786758","UMLS:C5543431","DOID:0070336"],"synonyms":[{"name":"AMC6","type":"exact"},{"name":"arthrogryposis multiplex congenita 6","type":"exact"}],"termid":"MONDO:0030281","terms_by_termid":{"MONDO:0030281":null},"xrefs":{"Monarch":{"xref_id":"0030281"}}}


id: PBO:0031575
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_during_vegetative_growth","termid":"PBO:0031575"}


id: GO:0075095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism stops, prevents, or reduces the frequency, rate or extent of the symbiont signal transduction mediated by G-protein beta subunit. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by host of symbiont signal transduction mediated by G-protein beta subunit (obsolete GO:0075095)","termid":"GO:0075095"}


id: GO:0106093
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A plant complex involved in basal disease resistance and resistance (R) gene-mediated effector triggered immunity (ETI). Regulates accumulation of the hormone salicylic acid (SA) which is a necessary component of systemic immunity. Involved in responds to bacteria, viruses and oomycetes.","definition_xrefs":["GOC:bhm","PMID:11574472","PMID:16040633"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"EDS1 disease-resistance complex","synonyms":[{"name":"EDS1-PAD4 complex","type":"narrow"},{"name":"EDS1-PAD4-SAG101 complex","type":"narrow"},{"name":"EDS1-SAG101 complex","type":"narrow"}],"termid":"GO:0106093"}


id: MONDO:0015695
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of combined immunodeficiency characterized by recurrent infections, autoimmunity, congenital myopathy and ectodermal dysplasia. It comprises two sub-types that are due to mutations in the ORAI1 and STIM1 genes: CID due to ORAI1 deficiency and CID due to STIM1 deficiency.","definition_xrefs":["Orphanet:169090"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined immunodeficiency","termid":"MONDO:0015131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"combined immunodeficiency due to CRAC channel dysfunction","secondary_identifiers":["GARD:17048","icd11.foundation:1641826886","UMLS:C4303571","MEDGEN:929240","SCTID:717811007"],"synonyms":[{"name":"immune dysfunction due to T-cell inactivation due to calcium entry defect","type":"exact"}],"termid":"MONDO:0015695","xrefs":{"Monarch":{"xref_id":"0015695"}}}


id: MOD:01879
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts two L-cysteine residues, an L-arginine residue, an L-threonine residue and a copper atom to the methanobactin SB2 copper complex.","definition_xrefs":["PubMed:20961038","RESID:AA0555"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copper containing modified residue","termid":"MOD:00742"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"methanobactin SB2 copper complex","synonyms":[{"name":"METAL copper [Cu-methanobactin SB2 complex]","type":"exact"},{"name":"[5-(hydroxy[sulfanyl-kappaS]methylene)-3,5-dihydro-4H-imidazol-4-onato-kappaN1][4-(hydroxy[sulfanyl-kappaS]methylene)-1,3-oxazol-5(4H)-onato-kappaN]copper","type":"exact"},{"name":"methanobactin SB2 copper complex","type":"exact"}],"termid":"MOD:01879"}


id: MONDO:0008446
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm protamine P4","secondary_identifiers":["UMLS:C1866801","OMIM:182882","MEDGEN:355802"],"synonyms":[{"name":"PRM4","type":"related"},{"name":"sperm protamine P4","type":"exact"}],"termid":"MONDO:0008446","xrefs":{"Monarch":{"xref_id":"0008446"}}}


id: PBO:0075898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST7 overlapping transcript 4","termid":"PBO:0075898"}


id: PBO:0117164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CELF2 antisense RNA 3","termid":"PBO:0117164"}


id: PBO:0073608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid acetylesterase","termid":"PBO:0073608"}


id: PBO:0043092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbohydrate sulfotransferase 4","termid":"PBO:0043092"}


id: GO:0042575
data:
  {"annotated_genes":["SJAG_04879","SJAG_02627","SJAG_05197","SJAG_02658","SJAG_02172","SJAG_00153","SJAG_04994","SJAG_04877","SJAG_00611","SJAG_02818","SJAG_02667","SJAG_01823","SJAG_02908","SJAG_00814","SJAG_05239"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72132,76987,74688,76600],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005658"},{"annotations":[76823,72734,78622,104647],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043625"},{"annotations":[117263,109178,111785,115422],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008622"},{"annotations":[63801],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005760"},{"annotations":[79419,104700],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016035"}]},"cv_name":"cellular_component","definition":"A protein complex that possesses DNA polymerase activity and is involved in template directed synthesis of DNA.","definition_xrefs":["PMID:12045093","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex, transferring phosphorus-containing groups","termid":"GO:0061695"},{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00153":null,"SJAG_00611":null,"SJAG_00814":null,"SJAG_01823":null,"SJAG_02172":null,"SJAG_02627":null,"SJAG_02658":null,"SJAG_02667":null,"SJAG_02818":null,"SJAG_02908":null,"SJAG_04877":null,"SJAG_04879":null,"SJAG_04994":null,"SJAG_05197":null,"SJAG_05239":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"DNA polymerase complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0042575","terms_by_termid":{"GO:0005658":null,"GO:0005760":null,"GO:0008622":null,"GO:0016035":null,"GO:0043625":null}}


id: PBO:0028884
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H3-K4_methylation","termid":"PBO:0028884"}


id: GO:0033340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the pelvic fin over time, from its formation to the mature structure.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fin development","termid":"GO:0033333"},{"relation_name":"is_a","term_name":"limb development","termid":"GO:0060173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pelvic fin development","termid":"GO:0033340"}


id: PBO:0054104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1467","termid":"PBO:0054104"}


id: MONDO:0010069
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spondylocostal dysostosis-anal and genitourinary malformations syndrome is characterized by the association of spondylocostal dysostosis with anal and genitourinary malformations (anal atresia and agenesis of external and internal genitalia). To date, only four cases have been described in the literature. Autosomal recessive inheritance has been suggested.","definition_xrefs":["Orphanet:94095"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"reproductive system disorder","termid":"MONDO:0005039"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondylocostal dysostosis-anal and genitourinary malformations syndrome","secondary_identifiers":["UMLS:C1849069","MESH:C564799","OMIM:271520","MEDGEN:341373"],"synonyms":[{"name":"CMn syndrome","type":"related"},{"name":"Casamassima-Morton-Nance syndrome","type":"exact"},{"name":"spondylocostal dysostosis with anal atresia and urogenital anomalies","type":"related"},{"name":"spondylocostal dysostosis-anal atresia-genitourinary malformation syndrome","type":"related"}],"termid":"MONDO:0010069","xrefs":{"Monarch":{"xref_id":"0010069"}}}


id: MONDO:0032936
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"myopathy, congenital, with respiratory insufficiency and bone fractures","secondary_identifiers":["DOID:0081343","UMLS:C5394189","MEDGEN:1718097","OMIM:618822"],"synonyms":[{"name":"MYOPATHY, CONGENITAL, WITH RESPIRATORY INSUFFICIENCY AND BONE FRACTURES","type":"related"},{"name":"MYORIBF","type":"related"}],"termid":"MONDO:0032936","xrefs":{"Monarch":{"xref_id":"0032936"}}}


id: _global:may_be_merged_into
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"may_be_merged_into","termid":"_global:may_be_merged_into","xrefs":{"Monarch":{"xref_id":"may_be_merged_into"}}}


id: FYPO:0001325
data:
  {"alleles_by_uniquename":{"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121003,121004,121002],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001327"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell differs from normal when the cell is in the vegetative growth phase of the life cycle. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered protein level","termid":"FYPO:0000834"},{"relation_name":"is_a","term_name":"altered level of substance in cell during vegetative growth","termid":"FYPO:0001323"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01956":null,"SJAG_03198":null,"SJAG_03351":null,"SJAG_03575":null},"genotype_count":3,"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"altered protein level during vegetative growth","references_by_uniquename":{"PMID:23786411":null},"single_locus_annotated_genes":["SJAG_03351","SJAG_01956","SJAG_03575"],"single_locus_genotype_uniquenames":["nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal protein level during vegetative growth","type":"exact"},{"name":"altered cellular protein level during vegetative growth","type":"exact"},{"name":"altered protein level during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001325","terms_by_termid":{"FYECO:0000006":null,"FYECO:0000137":null,"FYPO:0001327":null}}


id: PBO:0056063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine zipper protein 4","termid":"PBO:0056063"}


id: GO:0004621
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycoprotein phosphatidylinositol + H2O = phosphatidate + glycoprotein inositol.","definition_xrefs":["EC:3.1.4.50"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase D activity","termid":"GO:0004630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"glycosylphosphatidylinositol phospholipase D activity","secondary_identifiers":["RHEA:10832","Reactome:R-HSA-8940388","MetaCyc:GLYCOPROTEIN-PHOSPHOLIPASE-D-RXN"],"synonyms":[{"name":"GPI-PLD activity","type":"related"},{"name":"glycoprotein phospholipase D activity","type":"exact"},{"name":"glycoprotein-phosphatidylinositol phosphatidohydrolase activity","type":"related"},{"name":"phosphatidylinositol phospholipase D activity","type":"related"},{"name":"phosphatidylinositol-glycan-specific phospholipase D activity","type":"related"},{"name":"phosphatidylinositol-specific phospholipase D activity","type":"related"}],"termid":"GO:0004621"}


id: PBO:0076452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAGAP antisense RNA 1","termid":"PBO:0076452"}


id: MONDO:0014935
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any frontometaphyseal dysplasia in which the cause of the disease is a mutation in the MAP3K7 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"frontometaphyseal dysplasia","termid":"MONDO:0015942"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frontometaphyseal dysplasia 2","secondary_identifiers":["DOID:0111787","UMLS:C4310697","MEDGEN:934664","OMIM:617137","GARD:16199"],"synonyms":[{"name":"FMD2","type":"exact"},{"name":"Frontometaphyseal dysplasia 2","type":"exact"},{"name":"Frontometaphyseal dysplasia type 2","type":"exact"},{"name":"MAP3K7 frontometaphyseal dysplasia","type":"exact"},{"name":"frontometaphyseal dysplasia 2; FMD2","type":"exact"},{"name":"frontometaphyseal dysplasia caused by mutation in MAP3K7","type":"exact"}],"termid":"MONDO:0014935","xrefs":{"Monarch":{"xref_id":"0014935"}}}


id: GO:2000818
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of myoblast proliferation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"is_a","term_name":"regulation of myoblast proliferation","termid":"GO:2000291"},{"relation_name":"negatively_regulates","term_name":"myoblast proliferation","termid":"GO:0051450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of myoblast proliferation","termid":"GO:2000818"}


id: PBO:0058824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8054","termid":"PBO:0058824"}


id: PBO:0056661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 28","termid":"PBO:0056661"}


id: PBO:0065296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 3","termid":"PBO:0065296"}


id: PBO:0003782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy specific phophatidylinositol 3-kinase complex subunit Atg14 (predicted)","termid":"PBO:0003782"}


id: MONDO:0021655
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cutaneous mucinosis","termid":"MONDO:0002523"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"secondary catabolic mucinosis of skin","secondary_identifiers":["UMLS:C1274173","SCTID:402723003","MEDGEN:697525","ICD9:701.8"],"termid":"MONDO:0021655","xrefs":{"Monarch":{"xref_id":"0021655"}}}


id: GO:0035883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized structural and/or functional features of an enteroendocrine cell. Enteroendocrine cells are hormonally active epithelial cells in the gut that constitute the diffuse neuroendocrine system.","definition_xrefs":["GOC:bf","CL:0000164"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation","termid":"GO:0030855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"enteroendocrine cell differentiation","termid":"GO:0035883"}


id: GO:1900615
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving emericellamide A.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"emericellamide metabolic process","termid":"GO:1900555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"emericellamide A metabolic process","synonyms":[{"name":"emericellamide A metabolism","type":"exact"}],"termid":"GO:1900615"}


id: PBO:0083089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA binding protein with possible chromatin-reorganizing activity; involved in transcriptional activation, gene silencing, and DNA replication and repair","termid":"PBO:0083089"}


id: PBO:0116642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF related protein 1","termid":"PBO:0116642"}


id: GO:0004588
data:
  {"annotated_genes":["SJAG_00694"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75062],"is_not":false,"summary":null,"term":"GO:0004588"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: orotidine 5'-phosphate + diphosphate = orotate + 5-phospho-alpha-D-ribose 1-diphosphate.","definition_xrefs":["EC:2.4.2.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00694":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"orotate phosphoribosyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:OROPRIBTRANS-RXN","Reactome:R-HSA-73567","RHEA:10380"],"synonyms":[{"name":"OPRT activity","type":"related"},{"name":"OPRTase activity","type":"related"},{"name":"orotate phosphoribosyl pyrophosphate transferase activity","type":"related"},{"name":"orotic acid phosphoribosyltransferase activity","type":"related"},{"name":"orotidine 5'-monophosphate pyrophosphorylase activity","type":"related"},{"name":"orotidine monophosphate pyrophosphorylase activity","type":"related"},{"name":"orotidine phosphoribosyltransferase activity","type":"related"},{"name":"orotidine-5'-phosphate diphosphorylase activity","type":"related"},{"name":"orotidine-5'-phosphate pyrophosphorylase activity","type":"related"},{"name":"orotidine-5'-phosphate:diphosphate phospho-alpha-D-ribosyl-transferase activity","type":"related"},{"name":"orotidylate phosphoribosyltransferase activity","type":"related"},{"name":"orotidylate pyrophosphorylase activity","type":"related"},{"name":"orotidylic acid phosphorylase activity","type":"related"},{"name":"orotidylic acid pyrophosphorylase activity","type":"related"},{"name":"orotidylic phosphorylase activity","type":"related"},{"name":"orotidylic pyrophosphorylase activity","type":"related"}],"termid":"GO:0004588","terms_by_termid":{"GO:0004588":null}}


id: GO:0036514
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemotaxis process that directs the migration of an axon growth cone of a dopaminergic neuron to a specific target site in response to a combination of attractive and repulsive cues.","definition_xrefs":["GOC:PARL","GOC:bf","PMID:21106844","PMID:23517308"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon guidance","termid":"GO:0007411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dopaminergic neuron axon guidance","synonyms":[{"name":"DA axon guidance","type":"exact"},{"name":"dopaminergic axon guidance","type":"exact"},{"name":"mdDA axon guidance","type":"exact"}],"termid":"GO:0036514"}


id: MONDO:1012838
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any progressive retinal atrophy that occurs in dogs due to a mutation in the PDE6B gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"progressive retinal atrophy, dog","termid":"MONDO:1012226"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progressive retinal atrophy, PDE6B-related, dog","secondary_identifiers":["OMIA:002282-9615"],"termid":"MONDO:1012838","xrefs":{"Monarch":{"xref_id":"1012838"}}}


id: PBO:0043847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase X, M14 family member 2","termid":"PBO:0043847"}


id: PBO:0040034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo like helical domain containing 1","termid":"PBO:0040034"}


id: PBO:0054004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1332","termid":"PBO:0054004"}


id: GO:0102627
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O2 + parthenolide + reduced [NADPH--hemoprotein reductase] = 3beta-hydroxyparthenolide + H+ + H2O + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:61328"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"parthenolide 3beta-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-15532"],"termid":"GO:0102627"}


id: PBO:0057572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 767","termid":"PBO:0057572"}


id: GO:0050832
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Reactions triggered in response to the presence of a fungus that act to protect the cell or organism.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response","termid":"GO:0006952"},{"relation_name":"is_a","term_name":"response to fungus","termid":"GO:0009620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"defense response to fungus","secondary_identifiers":["GO:0009623","GO:0009817","GO:0042831"],"synonyms":[{"name":"defence response to fungi","type":"exact"},{"name":"defence response to fungus","type":"exact"},{"name":"defense response to fungi","type":"exact"},{"name":"defense response to fungus, incompatible interaction","type":"narrow"},{"name":"resistance response to pathogenic fungi","type":"narrow"},{"name":"resistance response to pathogenic fungus","type":"narrow"},{"name":"response to parasitic fungi","type":"narrow"},{"name":"response to parasitic fungus","type":"narrow"}],"termid":"GO:0050832"}


id: MONDO:0013577
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disorder of adipose tissue characterized by symmetric and bilateral enlargement of the lower extremities due to abnormal deposition of subcutaneous fat often in obese women. It is associated with hematoma, pain and may progress to secondary lymphedema which is known as lipolymphedema.","definition_xrefs":["MESH:D065134"],"direct_ancestors":[{"relation_name":"is_a","term_name":"subcutaneous tissue disorder","termid":"MONDO:0019296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lipedema","secondary_identifiers":["MEDGEN:451048","Orphanet:77243","UMLS:C0398370","OMIM:614103","MedDRA:10063955","SCTID:234102003","HP:0100695"],"synonyms":[{"name":"Lipedema (disease)","type":"exact"},{"name":"lipedema","type":"exact"}],"termid":"MONDO:0013577","xrefs":{"Monarch":{"xref_id":"0013577"}}}


id: PBO:0116848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane beta-glucan biosynthesis protein Max1","termid":"PBO:0116848"}


id: PBO:0004680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF953 family protein","termid":"PBO:0004680"}


id: PBO:0054321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1713","termid":"PBO:0054321"}


id: PBO:0004584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,3-glucan synthase Mok13","termid":"PBO:0004584"}


id: GO:0102379
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: steviolbioside + UDP-alpha-D-glucose = stevioside + UDP.","definition_xrefs":["RHEA:61744"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"steviolbioside glucosyltransferase activity (stevioside forming)","secondary_identifiers":["MetaCyc:RXN-13514"],"termid":"GO:0102379"}


id: PBO:0062688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily A member 9 pseudogene","termid":"PBO:0062688"}


id: MONDO:0100074
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections caused by viruses of the genus in the family caliciviridae, which is associated with epidemic gastroenteritis in humans.","definition_xrefs":["MESH:D029322"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Caliciviridae infectious disease","termid":"MONDO:0005687"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"norovirus infectious disease","termid":"MONDO:0100074","xrefs":{"Monarch":{"xref_id":"0100074"}}}


id: PBO:0079785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 1 member A6","termid":"PBO:0079785"}


id: PBO:0068963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 207, pseudogene","termid":"PBO:0068963"}


id: SO:0001830
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A PCR product obtained by applying the AFLP technique, based on a restriction enzyme digestion of genomic DNA and an amplification of the resulting fragments.","definition_xrefs":["GMOD:ea"],"direct_ancestors":[{"relation_name":"is_a","term_name":"PCR_product","termid":"SO:0000006"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AFLP_fragment","secondary_identifiers":["http://en.wikipedia.org/wiki/Amplified_fragment_length_polymorphism"],"synonyms":[{"name":"AFLP","type":"exact"},{"name":"AFLP fragment","type":"exact"},{"name":"AFLP-PCR","type":"exact"},{"name":"amplified fragment length polymorphism","type":"exact"},{"name":"amplified fragment length polymorphism PCR","type":"exact"}],"termid":"SO:0001830"}


id: MONDO:0021229
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the ciliary body.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ciliary body disorder","termid":"MONDO:0002970"},{"relation_name":"is_a","term_name":"iris neoplasm","termid":"MONDO:0021224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"ciliary body neoplasm","secondary_identifiers":["UMLS:C0339349","MEDGEN:137916","NCIT:C4364"],"synonyms":[{"name":"ciliary body neoplasm (disease)","type":"exact"},{"name":"ciliary body tumor","type":"exact"},{"name":"ciliary body tumour","type":"exact"},{"name":"neoplasm of ciliary body","type":"exact"},{"name":"neoplasm of the ciliary body","type":"exact"},{"name":"tumor of ciliary body","type":"exact"},{"name":"tumor of the ciliary body","type":"exact"},{"name":"tumour of ciliary body","type":"exact"},{"name":"tumour of the ciliary body","type":"exact"}],"termid":"MONDO:0021229","xrefs":{"Monarch":{"xref_id":"0021229"}}}


id: GO:0019788
data:
  {"annotated_genes":["SJAG_01018"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[120275],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061654"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of NEDD8 from one protein to another via the reaction X-NEDD8 + Y = Y-NEDD8 + X, where both X-NEDD8 and Y-NEDD8 are covalent linkages.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein transferase activity","termid":"GO:0019787"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0019787","GO:0016746","GO:0003824","GO:0003674","GO:0140096","GO:0016740"],"is_obsolete":false,"name":"NEDD8 transferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-8952044","Reactome:R-HSA-8952618","GO:0016976","Reactome:R-HSA-8952638","Reactome:R-HSA-8952631","Reactome:R-HSA-8956025","Reactome:R-HSA-8952626","GO:0042295","Reactome:R-HSA-8951648","Reactome:R-HSA-8951661","Reactome:R-HSA-8951764","GO:0019945"],"synonyms":[{"name":"Hub1 conjugating enzyme activity","type":"related"},{"name":"NEDD8 conjugating enzyme activity","type":"related"},{"name":"RUB1 conjugating enzyme activity","type":"related"}],"termid":"GO:0019788","terms_by_termid":{"GO:0061654":null}}


id: FYPO:0001403
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell adhesion phenotype observed in the vegetative growth phase of the life cycle in which cells adhere to a substrate more strongly or to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell adhesion during vegetative growth","termid":"FYPO:0000009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased cell-substrate adhesion","synonyms":[{"name":"increased cell-substrate adhesion during mitotic cell cycle","type":"related"},{"name":"increased cell-substrate adhesion during vegetative growth","type":"exact"}],"termid":"FYPO:0001403"}


id: PBO:0083265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; not conserved in closely related Saccharomyces species; 69% of ORF overlaps the uncharacterized ORF YKL075C","termid":"PBO:0083265"}


id: MONDO:0007959
data:
  {"annotated_genes":["SJAG_00579"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89155],"is_not":false,"summary":null,"term":"MONDO:0007959"}]},"cv_name":"mondo","definition":"A malignant, invasive embryonal neoplasm arising from the cerebellum. It occurs predominantly in children and has the tendency to metastasize via the cerebrospinal fluid pathways. Signs and symptoms include truncal ataxia, disturbed gait, lethargy, headache, and vomiting. There are four histologic variants: classic medulloblastoma, large cell/anaplastic medulloblastoma, desmoplastic/nodular medulloblastoma, and medulloblastoma with extensive nodularity.","definition_xrefs":["NCIT:C3222"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebellar neoplasm","termid":"MONDO:0002913"},{"relation_name":"is_a","term_name":"embryonal neoplasm","termid":"MONDO:0005564"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00579":null},"genotype_count":0,"is_obsolete":false,"name":"medulloblastoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0050902","icd11.foundation:290815825","MEDGEN:7517","ONCOTREE:MBL","SCTID:443333004","OMIM:155255","NANDO:2200090","Orphanet:616","MedDRA:10027107","UMLS:C0025149","NORD:1422","GARD:7005","DOID:0060104","ICDO:9470/3","MESH:D008527","EFO:0002939"],"synonyms":[{"name":"CNS PNET","type":"related"},{"name":"CPNET","type":"related"},{"name":"MDB","type":"related"},{"name":"brain medulloblastoma","type":"exact"},{"name":"cerebellar medulloblastoma","type":"exact"},{"name":"cerebellum embryonal neoplasm","type":"exact"},{"name":"infratentorial primitive neuroectodermal tumor","type":"related"},{"name":"infratentorial primitive neuroectodermal tumour","type":"related"},{"name":"localised primitive neuroectodermal tumour","type":"related"},{"name":"localized primitive neuroectodermal tumor","type":"related"},{"name":"medulloblastoma","type":"exact"},{"name":"medulloblastoma with extensive nodularity","type":"related"},{"name":"medulloblastoma, autosomal recessive, autosomal dominant, somatic mutation","type":"exact"},{"name":"medulloblastoma, desmoplastic","type":"related"},{"name":"medulloblastoma, desmoplastic, autosomal recessive, autosomal dominant, somatic mutation","type":"exact"},{"name":"medulloblastoma, malignant","type":"exact"},{"name":"medulloblastoma, somatic","type":"exact"},{"name":"medulloblastomas","type":"exact"}],"termid":"MONDO:0007959","terms_by_termid":{"MONDO:0007959":null},"xrefs":{"Monarch":{"xref_id":"0007959"}}}


id: PBO:0059108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MORN repeat containing 4","termid":"PBO:0059108"}


id: PBO:0071241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 82","termid":"PBO:0071241"}


id: PBO:0058078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4296","termid":"PBO:0058078"}


id: PBO:0046979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 86 member C2, pseudogene","termid":"PBO:0046979"}


id: GO:0031605
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The subunits forming the outer ring of the core complex of a proteasome located in the endoplasmic reticulum of a cell.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete ER proteasome core complex, alpha-subunit complex (obsolete GO:0031605)","termid":"GO:0031605"}


id: PBO:0110194
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canto_needs_approval_timestamp","termid":"PBO:0110194"}


id: GO:0031553
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of brain-derived neurotrophic factor-activated receptor activity.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of brain-derived neurotrophic factor-activated receptor activity (obsolete GO:0031553)","synonyms":[{"name":"activation of brain-derived neurotrophic factor receptor activity","type":"narrow"},{"name":"positive regulation of BDNF receptor activity","type":"exact"},{"name":"positive regulation of brain-derived neurotrophic factor receptor activity","type":"exact"},{"name":"stimulation of brain-derived neurotrophic factor receptor activity","type":"narrow"},{"name":"up regulation of brain-derived neurotrophic factor receptor activity","type":"exact"},{"name":"up-regulation of brain-derived neurotrophic factor receptor activity","type":"exact"},{"name":"upregulation of brain-derived neurotrophic factor receptor activity","type":"exact"}],"termid":"GO:0031553"}


id: PR:Q10134
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fep1 gene.","definition_xrefs":["UniProtKB:Q10134","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sensing transcription factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23E2.01","synonyms":[{"name":"Gaf-2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-fep1","type":"exact"},{"name":"transcription factor gaf2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10134"}


id: PBO:0054303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1695","termid":"PBO:0054303"}


id: GO:0120079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of microfilament motor activity.","definition_xrefs":["PMID:8621557","GOC:mah","PMID:20705471"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of microfilament motor activity (obsolete GO:0120079)","synonyms":[{"name":"regulation of actin filament motor activity","type":"exact"},{"name":"regulation of actin-activated ATPase activity","type":"related"},{"name":"regulation of actin-dependent ATPase activity","type":"related"},{"name":"regulation of actin-filament motor activity","type":"exact"},{"name":"regulation of muscle motor activity","type":"narrow"},{"name":"regulation of myosin ATPase activity","type":"related"}],"termid":"GO:0120079"}


id: GO:0090258
data:
  {"annotated_genes":["SJAG_04203"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118164],"is_not":false,"summary":null,"term":"GO:0090258"}]},"cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of mitochondrial fission. Mitochondrial fission is the division of a mitochondrion within a cell to form two or more separate mitochondrial compartments.","definition_xrefs":["GOC:tb","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organelle organization","termid":"GO:0010639"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of mitochondrial fission","termid":"GO:0090140"},{"relation_name":"negatively_regulates","term_name":"mitochondrial fission","termid":"GO:0000266"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04203":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0007005","GO:0008150"],"is_obsolete":false,"name":"negative regulation of mitochondrial fission","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"negative regulation of mitochondrial division","type":"exact"}],"termid":"GO:0090258","terms_by_termid":{"GO:0090258":null}}


id: PBO:0087761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of TORC1; TORC1 is a rapamycin-sensitive complex involved in growth control that contains Tor1p or Tor2p, Lst8p and Tco89p; contains four HEAT repeats and seven WD-40 repeats; may act as a scaffold protein to couple TOR and its effectors","termid":"PBO:0087761"}


id: GO:0010161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated upon sensing of red light by a photoreceptor molecule. Red light is electromagnetic radiation of wavelength of 580-700nm. An example of this response is seen at the beginning of many plant species developmental stages. These include germination, and the point when cotyledon expansion is triggered. In certain species these processes take place in response to absorption of red light by the pigment molecule phytochrome, but the signal can be reversed by exposure to far red light. During the initial phase the phytochrome molecule is only present in the red light absorbing form, but on absorption of red light it changes to a far red light absorbing form, triggering progress through development. An immediate short period of exposure to far red light entirely returns the pigment to its initial state and prevents triggering of the developmental process. A thirty minute break between red and subsequent far red light exposure renders the red light effect irreversible, and development then occurs regardless of whether far red light exposure subsequently occurs.","definition_xrefs":["GOC:mtg_far_red","GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"red or far-red light signaling pathway","termid":"GO:0010017"},{"relation_name":"is_a","term_name":"cellular response to red light","termid":"GO:0071491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"red light signaling pathway","synonyms":[{"name":"red light phototransduction","type":"exact"},{"name":"red light signal transduction","type":"exact"},{"name":"red light signalling pathway","type":"exact"}],"termid":"GO:0010161"}


id: GO:0042667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into an auditory hair cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron fate specification","termid":"GO:0048665"},{"relation_name":"part_of","term_name":"auditory receptor cell fate commitment","termid":"GO:0009912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"auditory receptor cell fate specification","synonyms":[{"name":"auditory hair cell fate specification","type":"exact"}],"termid":"GO:0042667"}


id: PBO:0017006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antibiotic biosynthesis monooxygenase-like domain (predicted)","termid":"PBO:0017006"}


id: GO:1990622
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex that is composed of CHOP (C/EBP homology protein, GADD153) and ATF3 (activating transcription factor 3) subunits.","definition_xrefs":["GOC:bf","PMID:8622660","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription regulator complex","termid":"GO:0005667"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"CHOP-ATF3 complex","synonyms":[{"name":"ATF3-CHOP complex","type":"exact"},{"name":"CHOP-ATF3 heterodimer","type":"exact"},{"name":"CHOP-ATF3 heterodimeric complex","type":"exact"},{"name":"GADD153-ATF3 complex","type":"exact"}],"termid":"GO:1990622"}


id: PBO:0036454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABC1 kinase family ubiquinone biosynthesis ATPase Abc1/Coq8","termid":"PBO:0036454"}


id: MONDO:0013943
data:
  {"annotated_genes":["SJAG_03440"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89044],"is_not":false,"summary":null,"term":"MONDO:0013943"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"peroxisome biogenesis disorder","termid":"MONDO:0019234"},{"relation_name":"is_a","term_name":"peroxisome biogenesis disorder due to PEX16 defect","termid":"MONDO:0100269"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03440":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0019053","MONDO:0006025","MONDO:0005066","MONDO:0005559"],"is_obsolete":false,"name":"peroxisome biogenesis disorder 8B","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:614877","MEDGEN:766874","DOID:0081437","GARD:15870","NCIT:C155763","UMLS:C3553960"],"synonyms":[{"name":"PBD8B","type":"related"},{"name":"peroxisome biogenesis disorder 8B","type":"exact"},{"name":"peroxisome biogenesis disorder type 8B","type":"exact"}],"termid":"MONDO:0013943","terms_by_termid":{"MONDO:0013943":null},"xrefs":{"Monarch":{"xref_id":"0013943"}}}


id: PBO:0029423
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_palmitoylation_during_vegetative_growth","termid":"PBO:0029423"}


id: PBO:0089356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane fluoride export channel","termid":"PBO:0089356"}


id: PBO:0063458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet derived growth factor subunit A","termid":"PBO:0063458"}


id: MONDO:0008482
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"thoracic malformation","termid":"MONDO:0015929"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sprengel deformity","secondary_identifiers":["MESH:C535802","icd11.foundation:2144522441","HP:0000912","GARD:7693","MEDGEN:56291","OMIM:184400","Orphanet:3181","MedDRA:10010455","SCTID:79120002","NORD:1736","UMLS:C0152438"],"synonyms":[{"name":"Sprengel deformity","type":"exact"},{"name":"Sprengel deformity (disease)","type":"exact"},{"name":"Sprengel's deformity","type":"related"},{"name":"Sprengel's shoulder","type":"related"},{"name":"congenital elevation of the scapula","type":"related"},{"name":"congenital upward displacement of the scapula","type":"related"},{"name":"high scapula","type":"exact"}],"termid":"MONDO:0008482","xrefs":{"Monarch":{"xref_id":"0008482"}}}


id: GO:0007366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Allocation of cells to parasegments in the embryo, through the action of overlapping series of pair rule gene activities.","definition_xrefs":["ISBN:0879694238","ISBN:0632030488"],"direct_ancestors":[{"relation_name":"is_a","term_name":"periodic partitioning","termid":"GO:0007365"},{"relation_name":"is_a","term_name":"anterior/posterior pattern specification","termid":"GO:0009952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"periodic partitioning by pair rule gene","termid":"GO:0007366"}


id: GO:0016656
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 monodehydro-L-ascorbate radical + NADH + H+ = 2 L-ascorbate + NAD+.","definition_xrefs":["RHEA:14581"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor","termid":"GO:0016655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"monodehydroascorbate reductase (NADH) activity","secondary_identifiers":["MetaCyc:1.6.5.4-RXN","EC:1.6.5.4"],"synonyms":[{"name":"AFR","type":"related"},{"name":"AFR-reductase activity","type":"related"},{"name":"MDAsA reductase (NADPH)","type":"related"},{"name":"MDHA","type":"related"},{"name":"NADH-semidehydroascorbate oxidoreductase activity","type":"related"},{"name":"NADH:AFR oxidoreductase activity","type":"related"},{"name":"NADH:ascorbate radical oxidoreductase activity","type":"related"},{"name":"NADH:monodehydroascorbate oxidoreductase activity","type":"related"},{"name":"NADH:semidehydroascorbic acid oxidoreductase activity","type":"related"},{"name":"SDA reductase activity","type":"related"},{"name":"ascorbate free radical reductase activity","type":"related"},{"name":"ascorbate free-radical reductase activity","type":"related"},{"name":"ascorbic free radical reductase activity","type":"related"},{"name":"monodehydroascorbate reductase activity","type":"exact"},{"name":"semidehydroascorbate reductase activity","type":"related"}],"termid":"GO:0016656"}


id: PBO:0055561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2997","termid":"PBO:0055561"}


id: PBO:0069573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 845, pseudogene","termid":"PBO:0069573"}


id: GO:1904844
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a L-glutamine stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:23185570"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to amino acid","termid":"GO:0043200"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to L-glutamine","termid":"GO:1904844"}


id: GO:0016014
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex comprising alpha- and beta-dystrobrevin; forms part of the dystrophin glycoprotein complex.","definition_xrefs":["PMID:16710609","PMID:15117830"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"dystrophin-associated glycoprotein complex","termid":"GO:0016010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"dystrobrevin complex","termid":"GO:0016014"}


id: GO:0044289
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Sites of close apposition of the inner and outer mitochondrial membrane.","definition_xrefs":["PMID:22009199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle membrane contact site","termid":"GO:0044232"},{"relation_name":"part_of","term_name":"mitochondrial membrane","termid":"GO:0031966"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005739","GO:0005737"],"is_obsolete":false,"name":"mitochondrial inner-outer membrane contact site","secondary_identifiers":["GO:0044285"],"synonyms":[{"name":"bridge contact site","type":"related"},{"name":"contact site","type":"broad"}],"termid":"GO:0044289"}


id: GO:0033200
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 4-diphospho-1D-myo-inositol (1,2,3,5,6)pentakisphosphate = ADP + 4,5-bisdiphosphoinositol-1D-myo-inositol (1,2,3,6)tetrakisphosphate, and ATP + 6-diphospho-1D-myo-inositol (1,2,3,4,5)pentakisphosphate = ADP + 5,6-bisdiphosphoinositol-1D-myo-inositol (1,2,3,4)tetrakisphosphate.","definition_xrefs":["PMID:17412958"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diphosphoinositol pentakisphosphate kinase activity","termid":"GO:0000829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016301","GO:0003824"],"is_obsolete":false,"name":"diphosphoinositol pentakisphosphate 5-kinase activity","synonyms":[{"name":"IP7 5-kinase activity","type":"exact"},{"name":"diphosphoinositol-pentakisphosphate 5-kinase activity","type":"exact"},{"name":"inositol heptakisphosphate 5-kinase activity","type":"exact"}],"termid":"GO:0033200"}


id: MONDO:0018960
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An idiopathic condition in which the bladder and bladder outlet are normal but the ureter is dilated to some extent. It may be obstructed, refluxing or unobstructed and not refluxing.","definition_xrefs":["Orphanet:617"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"congenital primary megaureter","secondary_identifiers":["GARD:18700","icd11.foundation:566805920","MEDGEN:903364","NANDO:2200184","SCTID:717459000","UMLS:C4273898"],"synonyms":[{"name":"CGM","type":"related"},{"name":"congenital giant megaureter","type":"related"},{"name":"congenital megalo-ureter","type":"related"},{"name":"congenital primary megalo-ureter","type":"exact"}],"termid":"MONDO:0018960","xrefs":{"Monarch":{"xref_id":"0018960"}}}


id: MONDO:0975847
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"autoimmune disease with susceptibility to mycobacterium tuberculosis","secondary_identifiers":["OMIM:621004"],"termid":"MONDO:0975847","xrefs":{"Monarch":{"xref_id":"0975847"}}}


id: GO:0086012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which cardiac muscle cell membrane potential changes in the depolarizing direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane depolarization during action potential","termid":"GO:0086010"},{"relation_name":"part_of","term_name":"cardiac muscle cell action potential","termid":"GO:0086001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"membrane depolarization during cardiac muscle cell action potential","termid":"GO:0086012"}


id: MONDO:0859186
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chopra-Amiel-Gordon syndrome","secondary_identifiers":["UMLS:C5561975","MEDGEN:1794185","OMIM:619504"],"termid":"MONDO:0859186","xrefs":{"Monarch":{"xref_id":"0859186"}}}


id: PBO:0064158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group IIC","termid":"PBO:0064158"}


id: PBO:0079837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UNC5B antisense RNA 1","termid":"PBO:0079837"}


id: PBO:0109075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 16 like (pseudogene)","termid":"PBO:0109075"}


id: FYPO:0004800
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which premeiotic DNA replication does not occur during a cycle of azygotic meiosis and sporulation. Azygotic meiosis and sporulation occur when meiosis takes place within a diploid cell rather than in a zygote produced by sporulation. Zygotes can resume vegetative growth and form colonies of diploid cells if returned to rich media before commitment to meiosis; under nitrogen starvation, diploid cells heterozygous for mating type will undergo azygotic meiosis. Azygotic asci have a characteristic linear morphology resembling that of a single vegetatively growing cell.","definition_xrefs":["PomBase:mah","PMID:25891897","PMID:22558440"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished premeiotic DNA replication","termid":"FYPO:0002044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0000293","FYPO:0000002"],"is_obsolete":false,"name":"abolished premeiotic DNA replication during azygotic meiotic cell cycle","synonyms":[{"name":"abolished DNA replication before azygotic meiotic cell cycle","type":"exact"},{"name":"abolished premeiotic DNA replication during azygotic meiosis","type":"related"},{"name":"abolished premeiotic DNA replication during azygotic meiosis and sporulation","type":"exact"},{"name":"absent premeiotic DNA replication during azygotic meiotic cell cycle","type":"exact"},{"name":"premeiotic DNA replication abolished during azygotic meiotic cell cycle","type":"exact"}],"termid":"FYPO:0004800"}


id: GO:0043116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that reduces the extent to which blood vessels can be pervaded by fluid.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vascular permeability","termid":"GO:0043114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of vascular permeability","synonyms":[{"name":"down regulation of vascular permeability","type":"exact"},{"name":"down-regulation of vascular permeability","type":"exact"},{"name":"downregulation of vascular permeability","type":"exact"},{"name":"inhibition of vascular permeability","type":"narrow"}],"termid":"GO:0043116"}


id: FYPO:0006396
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which interphase microtubule organizing center (iMTOC) assembly is abnormal. iMTOC assembly is the aggregation, arrangement and bonding together of a set of components to form an interphase microtubule organizing center.","definition_xrefs":["PomBase:mah","GO:0031024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0001350"},{"relation_name":"is_a","term_name":"abnormal cellular component assembly during vegetative growth","termid":"FYPO:0001354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000054","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal iMTOC assembly","synonyms":[{"name":"abnormal iMTOC assembly during mitotic cell cycle","type":"related"},{"name":"abnormal iMTOC assembly during vegetative growth","type":"exact"},{"name":"abnormal iMTOC formation","type":"exact"},{"name":"abnormal interphase microtubule organizing center assembly","type":"exact"},{"name":"abnormal interphase microtubule organizing center formation","type":"exact"}],"termid":"FYPO:0006396"}


id: FYPO:0000360
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which RNA localization is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localization phenotype during vegetative growth","termid":"FYPO:0001337"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"is_a","term_name":"abnormal RNA localization","termid":"FYPO:0003057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"abnormal RNA localization during vegetative growth","synonyms":[{"name":"RNA localization: abnormal","type":"related"},{"name":"abnormal RNA localisation during vegetative growth","type":"exact"},{"name":"abnormal RNA localization during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000360"}


id: PBO:0064807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory inhibitor subunit 1C","termid":"PBO:0064807"}


id: PR:Q9P6P9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pkp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P6P9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"[Pyruvate dehydrogenase (acetyl-transferring)] kinase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC644.11c","synonyms":[{"name":"Spom972h-pkp1","type":"exact"},{"name":"pyruvate dehydrogenase kinase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6P9"}


id: GO:0070254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of mucus by the mucosa. Mucus is a viscous slimy secretion consisting of mucins and various inorganic salts dissolved in water, with suspended epithelial cells and leukocytes. The mucosa, or mucous membrane, is the membrane covered with epithelium that lines the tubular organs of the body. Mucins are carbohydrate-rich glycoproteins that have a lubricating and protective function.","definition_xrefs":["ISBN:068340007X","ISBN:0721662544","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"body fluid secretion","termid":"GO:0007589"},{"relation_name":"is_a","term_name":"secretion by tissue","termid":"GO:0032941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"mucus secretion","synonyms":[{"name":"mucus production","type":"exact"}],"termid":"GO:0070254"}


id: PBO:0066592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras homolog family member G","termid":"PBO:0066592"}


id: GO:0044210
data:
  {"annotated_genes":["SJAG_05024"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[64193],"is_not":false,"summary":null,"term":"GO:0044210"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cytidine 5'-triphosphate (CTP) from simpler components.","definition_xrefs":["GOC:jl","PMID:11912132","PMID:18439916","GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CTP biosynthetic process","termid":"GO:0006241"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05024":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"'de novo' CTP biosynthetic process","references_by_uniquename":{"GO_REF:0000041":null},"synonyms":[{"name":"'de novo' cytidine 5'-triphosphate biosynthetic process","type":"exact"}],"termid":"GO:0044210","terms_by_termid":{"GO:0044210":null}}


id: MONDO:0003539
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute T-lymphoblastic leukemia occurring in adults.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adult acute lymphoblastic leukemia","termid":"MONDO:0003541"},{"relation_name":"is_a","term_name":"T-cell leukemia","termid":"MONDO:0005525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"T-cell adult acute lymphocytic leukemia","secondary_identifiers":["DOID:5602","UMLS:C0279592","EFO:1001936","MEDGEN:79009","NCIT:C9142"],"synonyms":[{"name":"T Acute Lymphoblastic Leukaemia","type":"exact"},{"name":"T Acute Lymphoblastic Leukemia","type":"exact"},{"name":"T cell adult ALL","type":"exact"},{"name":"T cell adult acute lymphoblastic leukaemia","type":"exact"},{"name":"T cell adult acute lymphoblastic leukemia","type":"exact"},{"name":"T cell adult acute lymphocytic leukaemia","type":"exact"},{"name":"T cell adult acute lymphocytic leukemia","type":"exact"},{"name":"T-cell adult ALL","type":"exact"},{"name":"acute Adult T-cell Leukemia-lymphoma","type":"exact"},{"name":"adult T acute lymphoblastic leukaemia","type":"exact"},{"name":"adult T acute lymphoblastic leukemia","type":"exact"},{"name":"adult T-cell acute lymphoblastic leukaemia","type":"exact"},{"name":"adult T-cell acute lymphoblastic leukemia","type":"exact"},{"name":"adult acute lymphoblastic leukaemia of T cell","type":"exact"},{"name":"adult acute lymphoblastic leukemia of T cell","type":"exact"},{"name":"adult precursor T lymphoblastic leukaemia","type":"exact"},{"name":"adult precursor T lymphoblastic leukemia","type":"exact"},{"name":"adult precursor T-lymphoblastic leukaemia","type":"exact"},{"name":"adult precursor T-lymphoblastic leukemia","type":"exact"}],"termid":"MONDO:0003539","xrefs":{"Monarch":{"xref_id":"0003539"}}}


id: PBO:0088456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic cysteine-tRNA ligase Crs1","termid":"PBO:0088456"}


id: GO:0052357
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of pectin in the symbiont cell wall. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by host of symbiont cell wall pectin (obsolete GO:0052357)","termid":"GO:0052357"}


id: PBO:0052304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA0040","termid":"PBO:0052304"}


id: GO:0001872
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a (1->3)-beta-D-glucan.","definition_xrefs":["PMID:14707091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide binding","termid":"GO:0030247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"(1->3)-beta-D-glucan binding","secondary_identifiers":["GO:0080087"],"synonyms":[{"name":"1,3-beta-D-glucan binding","type":"exact"},{"name":"callose binding","type":"narrow"},{"name":"zymosan binding","type":"narrow"}],"termid":"GO:0001872"}


id: FYPO:0005051
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to regions of chromatin containing genes that can be transcribed by RNA polymerase II is decreased when the cell is subject to nitrogen starvation.","definition_xrefs":["PMID:20605454","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin","termid":"FYPO:0001679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to chromatin at RNA polymerase II-regulated genes during nitrogen starvation","synonyms":[{"name":"decreased protein localisation to chromatin at RNA polymerase II-regulated genes during nitrogen starvation","type":"exact"},{"name":"decreased protein localization to chromatin at RNA polymerase II-regulated genes during nitrogen depletion","type":"exact"},{"name":"decreased protein localization to chromatin at RNA polymerase II-regulated genes during nitrogen deprivation","type":"exact"},{"name":"decreased protein localization to chromatin at polymerase II regulated genes during nitrogen starvation","type":"exact"},{"name":"reduced protein localization to chromatin at RNA polymerase II-regulated genes during nitrogen starvation","type":"exact"}],"termid":"FYPO:0005051"}


id: GO:0004102
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + choline = acetylcholine + CoA.","definition_xrefs":["EC:2.3.1.6","RHEA:18821"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"choline O-acetyltransferase activity","secondary_identifiers":["MetaCyc:CHOLINE-O-ACETYLTRANSFERASE-RXN","Reactome:R-HSA-264622","KEGG_REACTION:R01023"],"synonyms":[{"name":"CHOACTase activity","type":"related"},{"name":"acetyl-CoA:choline O-acetyltransferase activity","type":"related"},{"name":"choline acetylase activity","type":"related"},{"name":"choline acetyltransferase activity","type":"related"}],"termid":"GO:0004102"}


id: PBO:0018251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-aminolevulinate synthase Hem1","termid":"PBO:0018251"}


id: MONDO:1011442
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Enteropathy-associated T cell lymphoma that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-hodgkin lymphoma, non-human animal","termid":"MONDO:1010214"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enteropathy-associated T cell lymphoma, non-human animal","secondary_identifiers":["OMIA:002526"],"termid":"MONDO:1011442","xrefs":{"Monarch":{"xref_id":"1011442"}}}


id: MONDO:0011271
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited muscular dystrophy caused by mutations in the SEPN1 gene. It is characterized by severe limitation in flexion of the dorsolumbar and cervical spine, due to contracture of the spinal extensors. It leads to loss of movement of the spine and the thoracic cage.","definition_xrefs":["NCIT:C126691"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiminicore myopathy","termid":"MONDO:0018948"},{"relation_name":"is_a","term_name":"rigid spine syndrome","termid":"MONDO:0019951"},{"relation_name":"is_a","term_name":"SELENON-related myopathy","termid":"MONDO:0100100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"rigid spine muscular dystrophy 1","secondary_identifiers":["MEDGEN:98047","UMLS:C0410180","DOID:0110633","OMIM:602771","SCTID:240063002"],"synonyms":[{"name":"Eichsfeld type congenital muscular dystrophy","type":"exact"},{"name":"MDRS1","type":"exact"},{"name":"RSMD1","type":"exact"},{"name":"RSS","type":"exact"},{"name":"SELENON rigid spine syndrome","type":"exact"},{"name":"SEPN1-related myopathy","type":"related"},{"name":"classic MmD","type":"broad"},{"name":"classic multiminicore disease","type":"broad"},{"name":"classic multiminicore myopathy","type":"broad"},{"name":"congenital merosin-positive muscular dystrophy with early spine rigidity","type":"exact"},{"name":"desmin-related myopathy with Mallory bodies","type":"exact"},{"name":"minicore myopathy, severe classic form","type":"exact"},{"name":"multicore myopathy, severe classic form","type":"exact"},{"name":"multiminicore disease, severe classic form","type":"exact"},{"name":"muscular dystrophy, congenital, Eichsfeld type","type":"exact"},{"name":"muscular dystrophy, congenital, merosin-positive, with early spine rigidity","type":"exact"},{"name":"muscular dystrophy, rigid spine, 1","type":"exact"},{"name":"myopathy, SEPN1-related","type":"exact"},{"name":"rigid spine muscular dystrophy 1","type":"exact"},{"name":"rigid spine muscular dystrophy type 1","type":"exact"},{"name":"rigid spine syndrome","type":"broad"},{"name":"rigid spine syndrome caused by mutation in SELENON","type":"exact"},{"name":"severe classic form minicore myopathy","type":"exact"},{"name":"severe classic form multicore myopathy","type":"exact"},{"name":"severe classic form multiminicore disease","type":"exact"}],"termid":"MONDO:0011271","xrefs":{"Monarch":{"xref_id":"0011271"}}}


id: PBO:0085979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; protein abundance increases in response to DNA replication stress","termid":"PBO:0085979"}


id: PBO:0050885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"indoleamine 2,3-dioxygenase 2","termid":"PBO:0050885"}


id: GO:0061057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of peptidoglycan to a receptor and ending with regulation of a downstream cellular process. The main outcome of the Imd signaling is the production of antimicrobial peptides.","definition_xrefs":["PMID:24706930","GOC:dph","PMID:18688280"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern recognition receptor signaling pathway","termid":"GO:0002221"},{"relation_name":"part_of","term_name":"defense response to bacterium","termid":"GO:0042742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"peptidoglycan recognition protein signaling pathway","synonyms":[{"name":"Imd signaling pathway","type":"exact"},{"name":"Imd signalling pathway","type":"exact"},{"name":"PGRP signaling pathway","type":"related"},{"name":"immune deficiency pathway","type":"related"},{"name":"immune deficiency signaling pathway","type":"related"}],"termid":"GO:0061057"}


id: GO:0048581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of post-embryonic development. Post-embryonic development is defined as the process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of post-embryonic development","termid":"GO:0048580"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"post-embryonic development","termid":"GO:0009791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of post-embryonic development","synonyms":[{"name":"down regulation of post-embryonic development","type":"exact"},{"name":"down-regulation of post-embryonic development","type":"exact"},{"name":"downregulation of post-embryonic development","type":"exact"},{"name":"inhibition of post-embryonic development","type":"narrow"}],"termid":"GO:0048581"}


id: SO:1001249
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A CDS that is supported by domain similarity.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"supported_by_domain_match","termid":"SO:0000908"},{"relation_name":"is_a","term_name":"CDS_supported_by_sequence_similarity_data","termid":"SO:1001251"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDS_supported_by_domain_match_data","synonyms":[{"name":"CDS supported by domain match data","type":"exact"}],"termid":"SO:1001249"}


id: GO:0052451
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism modulates the frequency, rate or extent of the inflammatory response of a symbiont organism; the inflammatory response is the immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of symbiont inflammatory response (obsolete GO:0052451)","synonyms":[{"name":"modulation by organism of symbiont inflammatory response","type":"exact"}],"termid":"GO:0052451"}


id: MONDO:0016614
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive metabolic cerebellar ataxia","termid":"MONDO:0020044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive ataxia due to PEX10 deficiency","secondary_identifiers":["MEDGEN:1843173","GARD:20666","Orphanet:247815","UMLS:C5679614"],"synonyms":[{"name":"mild peroxismal disorder due to PEX10 deficiency","type":"exact"}],"termid":"MONDO:0016614","xrefs":{"Monarch":{"xref_id":"0016614"}}}


id: MONDO:0002771
data:
  {"annotated_genes":["SJAG_02194","SJAG_03855","SJAG_00566","SJAG_03125","SJAG_05979","SJAG_01836"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86833],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0800029"},{"annotations":[88354],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957261"},{"annotations":[88353],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957263"},{"annotations":[88119],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957294"},{"annotations":[87950],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013878"},{"annotations":[87074],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014612"},{"annotations":[88939],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030690"}]},"cv_name":"mondo","definition":"Chronic progressive interstitial lung disorder characterized by the replacement of the lung tissue by connective tissue, leading to progressive dyspnea, respiratory failure, or right heart failure. Causes include chronic inflammatory processes, exposure to environmental irritants, radiation therapy, autoimmune disorders, certain drugs, or it may be idiopathic (no identifiable cause).","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interstitial lung disease","termid":"MONDO:0015925"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00566":null,"SJAG_01836":null,"SJAG_02194":null,"SJAG_03125":null,"SJAG_03855":null,"SJAG_05979":null},"genotype_count":0,"is_obsolete":false,"name":"pulmonary fibrosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:3770","NCIT:C26869","MEDGEN:11028","SCTID:51615001","EFO:0009448","UMLS:C0034069","MESH:D011658"],"synonyms":[{"name":"fibrosis of lung","type":"exact"},{"name":"pulmonary interstitial fibrosis","type":"exact"}],"termid":"MONDO:0002771","terms_by_termid":{"MONDO:0013878":null,"MONDO:0014612":null,"MONDO:0030690":null,"MONDO:0800029":null,"MONDO:0957261":null,"MONDO:0957263":null,"MONDO:0957294":null},"xrefs":{"Monarch":{"xref_id":"0002771"}}}


id: GO:0098970
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which diffusing neurotransmitter receptor becomes trapped at the postsynaptic specialization membrane. This is typically due to interaction with components of the post-synaptic specialization.","definition_xrefs":["PMID:18832033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor localization to synapse","termid":"GO:0097120"},{"relation_name":"is_a","term_name":"regulation of postsynaptic membrane neurotransmitter receptor levels","termid":"GO:0099072"},{"relation_name":"is_a","term_name":"neurotransmitter receptor diffusion trapping","termid":"GO:0099628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"postsynaptic neurotransmitter receptor diffusion trapping","termid":"GO:0098970"}


id: RO:0002524
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x has subsequence y iff all of the sequence parts of x are sequence parts of y","direct_ancestors":[{"relation_name":"is_a","term_name":"has_part","termid":"BFO:0000051"},{"relation_name":"is_a","term_name":"bounds_sequence_of","termid":"RO:0002522"},{"relation_name":"is_a","term_name":"overlaps_sequence_of","termid":"RO:0002526"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_subsequence","termid":"RO:0002524"}


id: PBO:0014268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human TMEM165 homolog, congenital disorders of glycosylation","termid":"PBO:0014268"}


id: MONDO:0014964
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete encephalopathy, progressive, early-onset, with brain atrophy and thin corpus callosum (obsolete MONDO:0014964)","termid":"MONDO:0014964","xrefs":{"Monarch":{"xref_id":"0014964"}}}


id: GO:2000700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cardiac muscle cell myoblast differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of myoblast differentiation","termid":"GO:0045663"},{"relation_name":"is_a","term_name":"positive regulation of cardioblast differentiation","termid":"GO:0051891"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle cell myoblast differentiation","termid":"GO:2000690"},{"relation_name":"positively_regulates","term_name":"cardiac muscle cell myoblast differentiation","termid":"GO:0060379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac muscle cell myoblast differentiation","synonyms":[{"name":"positive regulation of cardiac myoblast differentiation","type":"related"},{"name":"positive regulation of myocardial precursor cell differentiation","type":"exact"}],"termid":"GO:2000700"}


id: GO:0035286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Division of a leg into a series of semi-repetitive parts or segments. Most arthropod appendages are visibly segmented; the Drosophila leg for example has nine segments, each separated from the next by a flexible joint.","definition_xrefs":["PMID:10357895"],"gene_count":0,"genotype_count":0,"name":"obsolete leg segmentation (obsolete GO:0035286)","synonyms":[{"name":"leg segmentation","type":"exact"}],"termid":"GO:0035286"}


id: GO:0075027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of symbiont appressorium initiation.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of appressorium initiation (obsolete GO:0075027)","synonyms":[{"name":"positive regulation of appressorium initiation on or near host","type":"related"},{"name":"positive regulation of initiation of appressorium on or near host","type":"exact"}],"termid":"GO:0075027"}


id: PBO:0028640
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_spore_population","termid":"PBO:0028640"}


id: PBO:0046137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 5A2 pseudogene 1","termid":"PBO:0046137"}


id: PBO:0082728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Rix1 complex and pre-replicative complexes (pre-RCs); required for processing of ITS2 sequences from 35S pre-rRNA; component of the pre-60S ribosomal particle with the dynein-related AAA-type ATPase Mdn1p; required for pre-RC formation and maintenance during DNA replication licensing; highly conserved protein which contains several WD40 motifs; IPI3 is an essential gene; other members include Rix1p, Ipi1p, and Ipi3p","termid":"PBO:0082728"}


id: PBO:0110189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prospore membrane formation Mug56","termid":"PBO:0110189"}


id: PBO:0049963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIG1 hypoxia inducible domain family member 1A pseudogene 9","termid":"PBO:0049963"}


id: FYPO:0003104
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of small RNA (such as siRNA) derived from mRNA transcripts measured in a cell is greater than normal.","definition_xrefs":["PMID:24095277","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0006551","FYPO:0001320"],"is_obsolete":false,"name":"increased mRNA-derived small RNA level","synonyms":[{"name":"increased accumulation of mRNA-derived small RNAs","type":"related"},{"name":"increased mRNA-derived small RNA accumulation","type":"related"},{"name":"increased mRNA-derived small RNA level during mitotic cell cycle","type":"related"},{"name":"increased mRNA-derived small RNA level during vegetative growth","type":"exact"},{"name":"increased mRNA-derived small transcript level","type":"exact"},{"name":"increased protein-coding gene-derived small RNA level","type":"related"}],"termid":"FYPO:0003104"}


id: MONDO:0004298
data:
  {"annotated_genes":["SJAG_02261","SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88859,88860],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0001056"}]},"cv_name":"mondo","definition":"A disease involving the stomach.","direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder","termid":"MONDO:0004335"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02261":null,"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"stomach disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:21329","ICD9:537.9","DOID:76","NCIT:C26886","UMLS:C0038354","ICD9:537.89","EFO:0009608","MESH:D013272","SCTID:29384001"],"synonyms":[{"name":"disease of stomach","type":"exact"},{"name":"disease or disorder of stomach","type":"exact"},{"name":"disorder of stomach","type":"exact"},{"name":"gastric disease","type":"related"},{"name":"gastropathy","type":"exact"},{"name":"stomach disease","type":"exact"},{"name":"stomach disease or disorder","type":"exact"},{"name":"stomach disorder","type":"exact"}],"termid":"MONDO:0004298","terms_by_termid":{"MONDO:0001056":null},"xrefs":{"Monarch":{"xref_id":"0004298"}}}


id: PBO:0083108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA ligase I found in nucleus and mitochondria; essential enzyme that joins Okazaki fragments during DNA replication; also acts in ribonucleotide excision repair, base excision repair, and recombination; DNA ligase I mutants trigger ubiquitination of PCNA at K107, facilitating Rad59p-mediated bypass of unligated Okazaki fragments; human homolog LIG1 can complement yeast cdc9 temperature-sensitive mutant at restrictive temperature","termid":"PBO:0083108"}


id: MONDO:0600030
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A B-cell acute leukemia characterized by the presence of lymphoblasts that carry a translocation between the E2A gene on chromosome 19 and the PBX1 gene on chromosome 1. It occurs in children and less often in adults.","definition_xrefs":["NCIT:C80347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B-cell acute lymphoblastic leukemia","termid":"MONDO:0004947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"B-cell acute lymphoblastic leukemia with t(1;19)(q23;p13.3); E2A-PBX1 (TCF3-PBX1)","secondary_identifiers":["Orphanet:585956","MEDGEN:396324","SCTID:450956008","DOID:0080649","GARD:22348","UMLS:C2698315"],"synonyms":[{"name":"B acute lymphoblastic leukaemia with t(1;19)(q23;p13.3); E2A-PBX1 (TCF3-PBX1)","type":"exact"},{"name":"B acute lymphoblastic leukemia with t(1;19)(q23;p13.3); E2A-PBX1 (TCF3-PBX1)","type":"exact"},{"name":"B lymphoblastic leukaemia lymphoma with t(1;19)(q23;p13.3); E2A-PBX1 (TCF3-PBX1) (morphologic abnormality)","type":"exact"},{"name":"B lymphoblastic leukemia lymphoma with t(1;19)(q23;p13.3); E2A-PBX1 (TCF3-PBX1) (morphologic abnormality)","type":"exact"},{"name":"B-acute lymphoblastic leukaemia with t(1;19)(q23;p13.3); E2A-PBX1 (TCF3-PBX1)","type":"exact"},{"name":"B-acute lymphoblastic leukemia with t(1;19)(q23;p13.3); E2A-PBX1 (TCF3-PBX1)","type":"exact"},{"name":"B-lymphoblastic leukemia/lymphoma with TCF3-PBX1","type":"exact"},{"name":"B-lymphoblastic leukemia/lymphoma with t(1;19)(q23;p13.3)","type":"exact"}],"termid":"MONDO:0600030","xrefs":{"Monarch":{"xref_id":"0600030"}}}


id: MONDO:0001639
data:
  {"annotated_genes":["SJAG_04459","SJAG_01199","SJAG_03447","SJAG_04042","SJAG_03164","SJAG_00694","SJAG_04425","SJAG_01007"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87124],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009238"},{"annotations":[87031,87032],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009354"},{"annotations":[87642],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009609"},{"annotations":[88473],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010184"},{"annotations":[86875],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008787"},{"annotations":[87022,87023],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009797"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"anemia","termid":"MONDO:0002280"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00694":null,"SJAG_01007":null,"SJAG_01199":null,"SJAG_03164":null,"SJAG_03447":null,"SJAG_04042":null,"SJAG_04425":null,"SJAG_04459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"deficiency anemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0041782","DOID:13121","ICD9:281.8","ICD9:281.9","SCTID:267513007","MEDGEN:508256"],"synonyms":[{"name":"deficiency anemias","type":"exact"},{"name":"unspecified deficiency anaemia","type":"exact"},{"name":"unspecified deficiency anemia","type":"exact"}],"termid":"MONDO:0001639","terms_by_termid":{"MONDO:0008787":null,"MONDO:0009238":null,"MONDO:0009354":null,"MONDO:0009609":null,"MONDO:0009797":null,"MONDO:0010184":null},"xrefs":{"Monarch":{"xref_id":"0001639"}}}


id: PR:Q9UT84
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC343.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UT84"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid scramblase family protein C343.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC343.06c","synonyms":[{"name":"Spom972h-SPAC343.06c","type":"exact"}],"termid":"PR:Q9UT84"}


id: PBO:0091061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Pol5","termid":"PBO:0091061"}


id: PBO:0090374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M phase inhibitor protein kinase Mik1","termid":"PBO:0090374"}


id: PBO:0068129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 436","termid":"PBO:0068129"}


id: GO:0033031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of neutrophil apoptotic process.","definition_xrefs":["GOC:add","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune system process","termid":"GO:0002684"},{"relation_name":"is_a","term_name":"regulation of neutrophil apoptotic process","termid":"GO:0033029"},{"relation_name":"is_a","term_name":"positive regulation of myeloid cell apoptotic process","termid":"GO:0033034"},{"relation_name":"is_a","term_name":"positive regulation of leukocyte apoptotic process","termid":"GO:2000108"},{"relation_name":"positively_regulates","term_name":"neutrophil apoptotic process","termid":"GO:0001781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neutrophil apoptotic process","synonyms":[{"name":"activation of neutrophil apoptosis","type":"narrow"},{"name":"positive regulation of neutrophil apoptosis","type":"narrow"},{"name":"stimulation of neutrophil apoptosis","type":"narrow"},{"name":"up regulation of neutrophil apoptosis","type":"exact"},{"name":"up-regulation of neutrophil apoptosis","type":"exact"},{"name":"upregulation of neutrophil apoptosis","type":"exact"}],"termid":"GO:0033031"}


id: MONDO:0010653
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An X-linked syndrome characterized by intellectual deficiency, microcephaly, leanness and mild short stature.","definition_xrefs":["Orphanet:3242"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic anorectal malformation (obsolete MONDO:0015246)","termid":"MONDO:0015246"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Renpenning syndrome","secondary_identifiers":["DOID:0060179","ICD9:759.89","MEDGEN:208670","MESH:C537761","SCTID:699669001","icd11.foundation:1415315699","GARD:9509","UMLS:C0796135","OMIM:309500","NCIT:C165533"],"synonyms":[{"name":"Golabi-Ito-Hall syndrome","type":"exact"},{"name":"MRXS3","type":"related"},{"name":"MRXS8","type":"related"},{"name":"RENS1","type":"related"},{"name":"Renpenning syndrome","type":"exact"},{"name":"Renpenning syndrome 1","type":"related"},{"name":"Renpenning syndrome type 1","type":"exact"},{"name":"Sutherland-Haan X-linked intellectual disability syndrome","type":"exact"},{"name":"Sutherland-Haan X-linked mental retardation syndrome","type":"exact"},{"name":"Sutherland-Haan syndrome","type":"related"},{"name":"X-linked intellectual disability Renpenning type","type":"exact"},{"name":"X-linked intellectual disability due to PQBP1 mutations","type":"exact"},{"name":"X-linked intellectual disability syndromic 3","type":"related"},{"name":"X-linked intellectual disability with spastic diplegia","type":"exact"},{"name":"X-linked intellectual disability, Renpenning type","type":"exact"},{"name":"X-linked mental retardation Renpenning type","type":"exact"},{"name":"X-linked mental retardation syndromic 3","type":"related"},{"name":"X-linked mental retardation with spastic diplegia","type":"exact"},{"name":"intellectual disability, X-linked 55","type":"related"},{"name":"intellectual disability, X-linked Renpenning type","type":"related"},{"name":"intellectual disability, X-linked, Renpenning type","type":"related"},{"name":"intellectual disability, X-linked, syndromic 3","type":"related"},{"name":"intellectual disability, X-linked, syndromic 8","type":"related"},{"name":"intellectual disability, X-linked, with spastic diplegia","type":"related"},{"name":"mental retardation, X-linked 55","type":"related"},{"name":"mental retardation, X-linked Renpenning type","type":"related"},{"name":"mental retardation, X-linked, Renpenning type","type":"related"},{"name":"mental retardation, X-linked, syndromic 3","type":"related"},{"name":"mental retardation, X-linked, syndromic 8","type":"related"},{"name":"mental retardation, X-linked, with spastic diplegia","type":"related"},{"name":"renpenning syndrome, X-linked recessive","type":"exact"},{"name":"syndromic X-linked intellectual disability 8","type":"exact"},{"name":"syndromic X-linked mental retardation 8","type":"exact"}],"termid":"MONDO:0010653","xrefs":{"Monarch":{"xref_id":"0010653"}}}


id: GO:1903399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of m7G(5')pppN diphosphatase activity.","definition_xrefs":["PMID:22323607","GO_REF:0000059","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of m7G(5')pppN diphosphatase activity (obsolete GO:1903399)","synonyms":[{"name":"activation of 7-methylguanosine-5'-triphospho-5'-polynucleotide 7-methylguanosine-5'-phosphohydrolase activity","type":"narrow"},{"name":"activation of M(7)G(5')pppN pyrophosphatase activity","type":"narrow"},{"name":"activation of decapase activity","type":"related"},{"name":"activation of m7G(5')pppN diphosphatase activity","type":"narrow"},{"name":"activation of m7G(5')pppN pyrophosphatase activity","type":"narrow"},{"name":"positive regulation of 7-methylguanosine-5'-triphospho-5'-polynucleotide 7-methylguanosine-5'-phosphohydrolase activity","type":"exact"},{"name":"positive regulation of M(7)G(5')pppN pyrophosphatase activity","type":"exact"},{"name":"positive regulation of decapase activity","type":"related"},{"name":"positive regulation of m7G(5')pppN pyrophosphatase activity","type":"exact"},{"name":"up regulation of 7-methylguanosine-5'-triphospho-5'-polynucleotide 7-methylguanosine-5'-phosphohydrolase activity","type":"exact"},{"name":"up regulation of M(7)G(5')pppN pyrophosphatase activity","type":"exact"},{"name":"up regulation of decapase activity","type":"related"},{"name":"up regulation of m7G(5')pppN diphosphatase activity","type":"exact"},{"name":"up regulation of m7G(5')pppN pyrophosphatase activity","type":"exact"},{"name":"up-regulation of 7-methylguanosine-5'-triphospho-5'-polynucleotide 7-methylguanosine-5'-phosphohydrolase activity","type":"exact"},{"name":"up-regulation of M(7)G(5')pppN pyrophosphatase activity","type":"exact"},{"name":"up-regulation of decapase activity","type":"related"},{"name":"up-regulation of m7G(5')pppN diphosphatase activity","type":"exact"},{"name":"up-regulation of m7G(5')pppN pyrophosphatase activity","type":"exact"},{"name":"upregulation of 7-methylguanosine-5'-triphospho-5'-polynucleotide 7-methylguanosine-5'-phosphohydrolase activity","type":"exact"},{"name":"upregulation of M(7)G(5')pppN pyrophosphatase activity","type":"exact"},{"name":"upregulation of decapase activity","type":"related"},{"name":"upregulation of m7G(5')pppN diphosphatase activity","type":"exact"},{"name":"upregulation of m7G(5')pppN pyrophosphatase activity","type":"exact"}],"termid":"GO:1903399"}


id: PBO:0120053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial RNA degradosome protein Pet127","termid":"PBO:0120053"}


id: GO:0031564
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A positive regulation of gene expression mechanism that allows RNA polymerase to continue transcription beyond a termination site, thus allowing expression of downstream genes under specific conditions.","definition_xrefs":["ISBN:0198577788","PMID:21478900","PMID:12456320","PMID:30191803"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gene expression","termid":"GO:0010628"},{"relation_name":"is_a","term_name":"negative regulation of termination of DNA-templated transcription","termid":"GO:0060567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0008150","GO:0006351","GO:0010467","GO:0006355"],"is_obsolete":false,"name":"transcription antitermination","synonyms":[{"name":"transcriptional readthrough","type":"exact"}],"termid":"GO:0031564"}


id: GO:0031152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the aggregate over time, from its formation to the point when a slug is formed. Aggregate development begins in response to starvation and continues by the chemoattractant-mediated movement of cells toward each other. The aggregate is a multicellular structure that gives rise to the slug.","definition_xrefs":["GOC:mtg_sensu","GOC:mah","ISBN:0521583640"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to starvation","termid":"GO:0009267"},{"relation_name":"is_a","term_name":"socially cooperative development","termid":"GO:0099120"},{"relation_name":"part_of","term_name":"sorocarp development","termid":"GO:0030587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aggregation involved in sorocarp development","synonyms":[{"name":"aggregate development involved in sorocarp development","type":"exact"},{"name":"aggregation during fruiting body development","type":"exact"}],"termid":"GO:0031152"}


id: PBO:0063645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase 1 pseudogene 2","termid":"PBO:0063645"}


id: PBO:0031319
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_rapamycin","termid":"PBO:0031319"}


id: GO:1901672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of systemic acquired resistance.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to biotic stimulus","termid":"GO:0002833"},{"relation_name":"is_a","term_name":"regulation of systemic acquired resistance","termid":"GO:0010112"},{"relation_name":"is_a","term_name":"positive regulation of defense response","termid":"GO:0031349"},{"relation_name":"is_a","term_name":"positive regulation of response to external stimulus","termid":"GO:0032103"},{"relation_name":"positively_regulates","term_name":"systemic acquired resistance","termid":"GO:0009627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of systemic acquired resistance","synonyms":[{"name":"activation of salicylic acid-dependent systemic resistance","type":"exact"},{"name":"activation of systemic acquired resistance","type":"narrow"},{"name":"positive regulation of salicylic acid-dependent systemic resistance","type":"exact"},{"name":"up regulation of salicylic acid-dependent systemic resistance","type":"exact"},{"name":"up regulation of systemic acquired resistance","type":"exact"},{"name":"up-regulation of salicylic acid-dependent systemic resistance","type":"exact"},{"name":"up-regulation of systemic acquired resistance","type":"exact"},{"name":"upregulation of salicylic acid-dependent systemic resistance","type":"exact"},{"name":"upregulation of systemic acquired resistance","type":"exact"}],"termid":"GO:1901672"}


id: PBO:0083088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA binding protein that recognizes oligo(dA).oligo(dT) tracts; Arg side chain in its N-terminal pentad Gly-Arg-Lys-Pro-Gly repeat is required for DNA-binding; relocalizes to the cytosol in response to hypoxia; not essential for viability","termid":"PBO:0083088"}


id: GO:0034763
data:
  {"annotated_genes":["SJAG_03631","SJAG_03970","SJAG_00296"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115220,93031],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905949"},{"annotations":[89904],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905533"},{"annotations":[89905],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905530"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of a solute from one side of a membrane to the other.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmembrane transport","termid":"GO:0034762"},{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"negatively_regulates","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_03631":null,"SJAG_03970":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"negative regulation of transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of transmembrane transport","type":"exact"},{"name":"down-regulation of transmembrane transport","type":"exact"},{"name":"downregulation of transmembrane transport","type":"exact"},{"name":"inhibition of transmembrane transport","type":"narrow"},{"name":"negative regulation of membrane transport","type":"exact"}],"termid":"GO:0034763","terms_by_termid":{"GO:1905530":null,"GO:1905533":null,"GO:1905949":null}}


id: PATO:0001355
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality that obtains by virtue of the bearer having inward facing edges; having a surface or boundary that curves or bulges outward, as the exterior of a sphere.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concavity","termid":"PATO:0002005"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"convex","termid":"PATO:0001355"}


id: PBO:0081012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 46","termid":"PBO:0081012"}


id: MONDO:0009901
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, inherited, popliteal pterygium syndrome characterized by severe popliteal webbing, microcephaly, a typical face with short palpebral fissures, ankyloblepharon, hypoplastic nose, filiform bands between the jaws and facial clefts, oligosyndactyly, genital abnormalities, and additional ectodermal anomalies (i.e. absent hair, eyebrows, lashes, nails). It is often fatal in the neonatal period, but patients living until childhood have been reported.","definition_xrefs":["Orphanet:1234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"popliteal pterygium syndrome","termid":"MONDO:0017435"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"},{"relation_name":"is_a","term_name":"hereditary lethal multiple congenital anomalies/dysmorphic syndrome","termid":"MONDO:0043009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Bartsocas-Papas syndrome 1","secondary_identifiers":["NCIT:C168990","SCTID:722376008","MESH:C564874","MEDGEN:337894","OMIM:263650","UMLS:C1849718","GARD:4436"],"synonyms":[{"name":"BPS","type":"related"},{"name":"Bartsocas Papas syndrome","type":"exact"},{"name":"Bartsocas-Papas syndrome","type":"exact"},{"name":"autosomal recessive popliteal pterygium syndrome","type":"exact"},{"name":"lethal popliteal pterygium syndrome","type":"exact"},{"name":"multiple pterygium syndrome, Aslan type","type":"related"},{"name":"popliteal pterygium syndrome lethal type","type":"related"},{"name":"popliteal pterygium syndrome, Bartsocas-Papas type","type":"related"},{"name":"popliteal pterygium syndrome, Bartsocas-Papas type 1","type":"exact"},{"name":"popliteal pterygium syndrome, lethal type","type":"exact"},{"name":"pterygium popliteal lethal type","type":"related"},{"name":"pterygium, popliteal, lethal type","type":"related"}],"termid":"MONDO:0009901","xrefs":{"Monarch":{"xref_id":"0009901"}}}


id: PBO:0075038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-1","termid":"PBO:0075038"}


id: PBO:0090940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eRF1 methyltransferase complex and tRNA (m2G10) methyltransferase complex regulatory subunit Trm112","termid":"PBO:0090940"}


id: PBO:0087873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional modulator; involved in regulation of meiosis, silencing, and expression of RNR genes; acts as a nuclear anchor to retain the ribonucleotide reductase small subunit heterodimer, Rnr2p-Rnr4p, in the nucleus when cells are not in S phase; contains WD repeats","termid":"PBO:0087873"}


id: PBO:0039824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor interacting protein 1","termid":"PBO:0039824"}


id: MONDO:0016145
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"qualitative or quantitative protein defects in neuromuscular diseases","termid":"MONDO:0016139"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"qualitative or quantitative defects of dysferlin","secondary_identifiers":["UMLS:C2931687","MEDGEN:419874","GARD:2003","Orphanet:207073","MESH:C537995"],"synonyms":[{"name":"dysferlinopathy","type":"exact"}],"termid":"MONDO:0016145","xrefs":{"Monarch":{"xref_id":"0016145"}}}


id: PBO:0051891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit alpha 2","termid":"PBO:0051891"}


id: GO:0045342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of major histocompatibility protein class II.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"MHC class II biosynthetic process","synonyms":[{"name":"MHC class II anabolism","type":"exact"},{"name":"MHC class II biosynthesis","type":"exact"},{"name":"MHC class II formation","type":"exact"},{"name":"MHC class II synthesis","type":"exact"},{"name":"major histocompatibility complex class II biosynthesis","type":"exact"},{"name":"major histocompatibility complex class II biosynthetic process","type":"exact"}],"termid":"GO:0045342"}


id: PBO:0085999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; similar to Listeria monocytogenes major sigma factor (rpoD gene product); the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0085999"}


id: PBO:0060016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 4","termid":"PBO:0060016"}


id: GO:0120522
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a short-chain 2,3-saturated fatty acyl-CoA + O2 = a short-chain (2E)-enoyl-CoA + H2O2.","definition_xrefs":["RHEA:78859"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA oxidase activity","termid":"GO:0003997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"short-chain fatty acyl-CoA oxidase activity","termid":"GO:0120522"}


id: GO:0051111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The adenylylation of peptidyl-histidine to form peptidyl-1'-(phospho-5'-adenosine)-L-histidine (otherwise known as tau-AMP-histidine, tele-AMP-histidine) or peptidyl-3'-(phospho-5'-adenosine)-L-histidine (otherwise known as pi-AMP-histidine, pros-AMP-histidine).","definition_xrefs":["RESID:AA0371"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein adenylylation","termid":"GO:0018117"},{"relation_name":"is_a","term_name":"peptidyl-histidine modification","termid":"GO:0018202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-histidine adenylylation","termid":"GO:0051111"}


id: PBO:0003593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H4 h4.2","termid":"PBO:0003593"}


id: MONDO:0100477
data:
  {"annotated_genes":["SJAG_04608"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87795],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018767"}]},"cv_name":"mondo","definition":"An inherited metabolic disease that has its basis in the disruption of methylamine metabolic process.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of peptide and amine metabolism","termid":"MONDO:0100473"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04608":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"disorder of methylamine metabolism","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0100477","terms_by_termid":{"MONDO:0018767":null},"xrefs":{"Monarch":{"xref_id":"0100477"}}}


id: GO:1990850
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane glycoprotein complex with aspartyl proteinase and metalloproteinase activity which is expressed in the gut. An example of this is found in the nematode Haemonchus contortus.","definition_xrefs":["PMID:11166393"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"peptidase complex","termid":"GO:1905368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"H-gal-GP complex","synonyms":[{"name":"Haemonchus galactose-containing glycoprotein complex","type":"exact"},{"name":"galactose-containing glycoprotein complex","type":"narrow"}],"termid":"GO:1990850"}


id: FYPO:0006581
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to fenpropimorph. Cells stop growing (and may die) at a concentration of fenpropimorph that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0005447","FYPO:0000003","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to fenpropimorph","synonyms":[{"name":"hypersensitive to fenpropimorph","type":"exact"},{"name":"sensitive to fenpropimorph during mitotic cell cycle","type":"related"},{"name":"sensitive to fenpropimorph during vegetative growth","type":"exact"}],"termid":"FYPO:0006581"}


id: PR:O74833
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA ligase 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04379","PANTHER:PTHR10459:SF7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA ligase 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1183.05c","secondary_identifiers":["UniProtKB:O74833"],"synonyms":[{"name":"DNA ligase IV (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-LIG4","type":"exact"},{"name":"polydeoxyribonucleotide synthase [ATP] 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74833"}


id: PBO:0044878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENND5B antisense RNA 1","termid":"PBO:0044878"}


id: MOD:00306
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Natural or modified residues with a mass of 113.084064 Da.","definition_xrefs":["PubMed:10523135","RESID:AA0301"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at a resolution below 0.000001 Da","termid":"MOD:00569"},{"relation_name":"is_a","term_name":"residues isobaric at 113.0-113.1 Da","termid":"MOD:00624"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"residues isobaric at 113.084064 Da","synonyms":[{"name":"L-isoleucine or L-leucine","type":"exact"},{"name":"Xle","type":"exact"}],"termid":"MOD:00306"}


id: PBO:0038902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADGRB3 divergent transcript","termid":"PBO:0038902"}


id: MONDO:1012189
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital neuromuscular disease, non-human animal","termid":"MONDO:1011851"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital neuromuscular disease, sheep","secondary_identifiers":["OMIA:000718-9940"],"termid":"MONDO:1012189","xrefs":{"Monarch":{"xref_id":"1012189"}}}


id: GO:0051316
data:
  {"annotated_genes":["SJAG_05319","SJAG_03437","SJAG_01805","SJAG_03989","SJAG_02731","SJAG_01775","SJAG_05220","SJAG_03683","SJAG_03220","SJAG_03926","SJAG_00918","SJAG_04508","SJAG_01837","SJAG_04076","SJAG_02346","SJAG_01211","SJAG_01371","SJAG_00794","SJAG_00678","SJAG_03217","SJAG_00418","SJAG_03327","SJAG_01278","SJAG_02814","SJAG_01224","SJAG_05266"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95643,89683],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051456"},{"annotations":[118544],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1904967"},{"annotations":[90958,111741,92795,95624,97131,91565,117788,109344,109662,115088,118781,110731,112165,99720,115958,104259,112209,107305,97377,102344,103161,110988,100442],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051455"}]},"cv_name":"biological_process","definition":"The cellular process in which spindle microtubules become physically associated with the proteins making up the kinetochore complex in meiosis.","definition_xrefs":["GOC:tb","GOC:ai","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"attachment of spindle microtubules to kinetochore","termid":"GO:0008608"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"meiotic metaphase chromosome alignment","termid":"GO:0051311"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00418":null,"SJAG_00678":null,"SJAG_00794":null,"SJAG_00918":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01278":null,"SJAG_01371":null,"SJAG_01775":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_02346":null,"SJAG_02731":null,"SJAG_02814":null,"SJAG_03217":null,"SJAG_03220":null,"SJAG_03327":null,"SJAG_03437":null,"SJAG_03683":null,"SJAG_03926":null,"SJAG_03989":null,"SJAG_04076":null,"SJAG_04508":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0140013","GO:0008150"],"is_obsolete":false,"name":"attachment of meiotic spindle microtubules to kinetochore","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0051317"],"synonyms":[{"name":"attachment of spindle microtubules to kinetochore during meiosis","type":"related"},{"name":"attachment of spindle microtubules to kinetochore during meiotic chromosome segregation","type":"related"},{"name":"attachment of spindle microtubules to meiotic chromosome","type":"exact"}],"termid":"GO:0051316","terms_by_termid":{"GO:0051455":null,"GO:0051456":null,"GO:1904967":null}}


id: FYPO:0007034
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of phenylglyoxal than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002682","FYPO:0005447","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"resistance to phenylglyoxal","synonyms":[{"name":"resistance to 2-oxo-2-phenylacetaldehyde","type":"exact"},{"name":"resistance to phenylglyoxal during mitotic cell cycle","type":"related"},{"name":"resistance to phenylglyoxal during vegetative growth","type":"exact"},{"name":"resistant to phenylglyoxal","type":"exact"}],"termid":"FYPO:0007034"}


id: PBO:0045451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydropyrimidinase like 4","termid":"PBO:0045451"}


id: GO:0042359
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving vitamin D, any of a group of related, fat-soluble compounds that are derived from delta-5,7 steroids and play a central role in calcium metabolism. Specific forms of vitamin D include calciferol (ergocalciferol; vitamin D2) and cholecalciferol (calciol; vitamin D3).","definition_xrefs":["ISBN:0471331309","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fat-soluble vitamin metabolic process","termid":"GO:0006775"},{"relation_name":"is_a","term_name":"steroid metabolic process","termid":"GO:0008202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006766","GO:0006629"],"is_obsolete":false,"name":"vitamin D metabolic process","secondary_identifiers":["Reactome:R-HSA-196791"],"synonyms":[{"name":"calciferol metabolic process","type":"narrow"},{"name":"calciferol metabolism","type":"narrow"},{"name":"cholecalciferol metabolic process","type":"narrow"},{"name":"cholecalciferol metabolism","type":"narrow"},{"name":"ergocalciferol metabolic process","type":"narrow"},{"name":"ergocalciferol metabolism","type":"narrow"},{"name":"vitamin D metabolism","type":"exact"}],"termid":"GO:0042359"}


id: PBO:0049034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 21","termid":"PBO:0049034"}


id: PBO:0058726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6854","termid":"PBO:0058726"}


id: GO:0061203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of proteins to form the paramyosin-based thick filaments of myofibrils in striated muscle.","definition_xrefs":["GOC:dph","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paramyosin filament assembly or disassembly","termid":"GO:0061204"},{"relation_name":"part_of","term_name":"myofibril assembly","termid":"GO:0030239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0030036","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"striated muscle paramyosin thick filament assembly","termid":"GO:0061203"}


id: GO:1902026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cartilage condensation.","definition_xrefs":["PMID:17202865","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"cartilage condensation","termid":"GO:0001502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cartilage condensation","termid":"GO:1902026"}


id: GO:0010115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of abscisic acid.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of isoprenoid metabolic process","termid":"GO:0019747"},{"relation_name":"is_a","term_name":"regulation of lipid biosynthetic process","termid":"GO:0046890"},{"relation_name":"is_a","term_name":"regulation of alcohol biosynthetic process","termid":"GO:1902930"},{"relation_name":"regulates","term_name":"abscisic acid biosynthetic process","termid":"GO:0009688"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of abscisic acid biosynthetic process","synonyms":[{"name":"regulation of abscisic acid anabolism","type":"exact"},{"name":"regulation of abscisic acid biosynthesis","type":"exact"},{"name":"regulation of abscisic acid formation","type":"exact"},{"name":"regulation of abscisic acid synthesis","type":"exact"}],"termid":"GO:0010115"}


id: PBO:0109451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chibby 1, beta catenin antagonist","termid":"PBO:0109451"}


id: PR:P79065
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tip1 gene.","definition_xrefs":["UniProtKB:P79065","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tip elongation protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3C7.12","synonyms":[{"name":"Spom972h-tip1","type":"exact"},{"name":"protein noc1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P79065"}


id: MONDO:0011046
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by short stature presenting in the neonatal period associated with osteochondrodysplastic lesions and facial dysmorphism.","definition_xrefs":["Orphanet:2867"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with disorganized development of skeletal components (obsolete MONDO:0019708)","termid":"MONDO:0019708"},{"relation_name":"is_a","term_name":"musculoskeletal system disorder","termid":"MONDO:0002081"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short stature, Brussels type","secondary_identifiers":["SCTID:719213009","UMLS:C1832439","MESH:C537121","icd11.foundation:251068104","MEDGEN:318625","OMIM:601350","GARD:4838"],"synonyms":[{"name":"Mievis Verellen-Dumoulin syndrome","type":"related"},{"name":"Mievis-Verellen-Dumoulin syndrome","type":"exact"},{"name":"familial short stature with facial dysmorphism and osteochondrodysplastic lesions","type":"related"},{"name":"short stature syndrome, Brussels type","type":"related"}],"termid":"MONDO:0011046","xrefs":{"Monarch":{"xref_id":"0011046"}}}


id: PBO:0068781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 18, pseudogene","termid":"PBO:0068781"}


id: GO:1903078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to plasma membrane.","definition_xrefs":["GO_REF:0000058","GOC:BHF","GOC:TermGenie","GOC:rl","PMID:11602640"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to plasma membrane","termid":"GO:1903076"},{"relation_name":"is_a","term_name":"positive regulation of protein localization to cell periphery","termid":"GO:1904377"},{"relation_name":"is_a","term_name":"positive regulation of protein localization to membrane","termid":"GO:1905477"},{"relation_name":"positively_regulates","term_name":"protein localization to plasma membrane","termid":"GO:0072659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to plasma membrane","secondary_identifiers":["GO:1905965","GO:0090004"],"synonyms":[{"name":"activation of protein localisation in plasma membrane","type":"narrow"},{"name":"activation of protein localization in plasma membrane","type":"narrow"},{"name":"activation of protein localization to plasma membrane","type":"narrow"},{"name":"activation of protein targeting to plasma membrane","type":"narrow"},{"name":"activation of protein-plasma membrane targeting","type":"narrow"},{"name":"positive regulation of establishment of protein localisation in plasma membrane","type":"related"},{"name":"positive regulation of establishment of protein localization to plasma membrane","type":"related"},{"name":"positive regulation of protein localisation in plasma membrane","type":"exact"},{"name":"positive regulation of protein localization in plasma membrane","type":"exact"},{"name":"positive regulation of protein targeting to plasma membrane","type":"related"},{"name":"positive regulation of protein-plasma membrane targeting","type":"related"},{"name":"up regulation of protein localisation in plasma membrane","type":"exact"},{"name":"up regulation of protein localization in plasma membrane","type":"exact"},{"name":"up regulation of protein localization to plasma membrane","type":"exact"},{"name":"up regulation of protein targeting to plasma membrane","type":"related"},{"name":"up regulation of protein-plasma membrane targeting","type":"related"},{"name":"up-regulation of protein localisation in plasma membrane","type":"exact"},{"name":"up-regulation of protein localization in plasma membrane","type":"exact"},{"name":"up-regulation of protein localization to plasma membrane","type":"exact"},{"name":"up-regulation of protein targeting to plasma membrane","type":"related"},{"name":"up-regulation of protein-plasma membrane targeting","type":"related"},{"name":"upregulation of protein localisation in plasma membrane","type":"exact"},{"name":"upregulation of protein localization in plasma membrane","type":"exact"},{"name":"upregulation of protein localization to plasma membrane","type":"exact"},{"name":"upregulation of protein targeting to plasma membrane","type":"related"},{"name":"upregulation of protein-plasma membrane targeting","type":"related"}],"termid":"GO:1903078"}


id: PBO:0080091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 53","termid":"PBO:0080091"}


id: GO:0102641
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-propane-1,2-diol + NADP = (R)-lactaldehyde + NADPH + H+.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"(R)-lactaldehyde dehydrogenase activity","secondary_identifiers":["MetaCyc:RXN-15743"],"termid":"GO:0102641"}


id: MONDO:0006052
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A bacterial infection that affects the lungs and is caused by Mycobacterium tuberculosis. Most patients with tuberculosis do not have symptoms (latent tuberculosis) and are not contagious. When signs and symptoms occur (active tuberculosis), patients become contagious. The signs and symptoms include chronic cough with blood-tinged sputum, night sweats, fever, fatigue, and weight loss.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"},{"relation_name":"is_a","term_name":"tuberculosis","termid":"MONDO:0018076"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary tuberculosis","secondary_identifiers":["ICD9:011.86","DOID:2957","ICD9:011.85","ICD9:011.16","ICD9:011.9","MESH:D014397","ICD9:011.80","NCIT:C26899","ICD9:011.92","ICD9:011","ICD9:011.90","EFO:1000049","ICD9:011.81","ICD9:011.84","ICD9:011.96","MEDGEN:11947","UMLS:C0041327","SCTID:154283005"],"synonyms":[{"name":"lung TB","type":"exact"},{"name":"lung tuberculosis","type":"exact"},{"name":"pulmonary TB","type":"exact"}],"termid":"MONDO:0006052","xrefs":{"Monarch":{"xref_id":"0006052"}}}


id: GO:0046949
data:
  {"annotated_genes":["SJAG_04007"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109312],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035338"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a fatty-acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty-acyl group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty-acyl-CoA metabolic process","termid":"GO:0035337"},{"relation_name":"is_a","term_name":"acyl-CoA biosynthetic process","termid":"GO:0071616"},{"relation_name":"is_a","term_name":"fatty acid derivative biosynthetic process","termid":"GO:1901570"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0006790","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"fatty-acyl-CoA biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-75105"],"synonyms":[{"name":"fatty acyl CoA biosynthetic process","type":"exact"},{"name":"fatty-acyl-CoA anabolism","type":"exact"},{"name":"fatty-acyl-CoA biosynthesis","type":"exact"},{"name":"fatty-acyl-CoA formation","type":"exact"},{"name":"fatty-acyl-CoA synthesis","type":"exact"}],"termid":"GO:0046949","terms_by_termid":{"GO:0035338":null}}


id: PBO:0035703
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H4-K16_acetylation_at_telomere_during_vegetative_growth","termid":"PBO:0035703"}


id: MONDO:0003818
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mature teratoma that arises from the ovary and occurs in children.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"childhood teratoma of the ovary","termid":"MONDO:0003819"},{"relation_name":"is_a","term_name":"mature ovarian teratoma","termid":"MONDO:0003820"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"childhood mature teratoma of the ovary","secondary_identifiers":["NCIT:C6548","MEDGEN:232354","UMLS:C1332991","DOID:6229"],"synonyms":[{"name":"childhood mature ovarian teratoma","type":"exact"},{"name":"childhood mature teratoma of ovary","type":"exact"},{"name":"childhood ovarian mature teratoma","type":"exact"},{"name":"mature ovarian teratoma of childhood","type":"exact"},{"name":"paediatric mature ovarian teratoma","type":"exact"},{"name":"paediatric mature teratoma of ovary","type":"exact"},{"name":"paediatric mature teratoma of the ovary","type":"exact"},{"name":"paediatric ovarian mature teratoma","type":"exact"},{"name":"pediatric mature ovarian teratoma","type":"exact"},{"name":"pediatric mature teratoma of ovary","type":"exact"},{"name":"pediatric mature teratoma of the ovary","type":"exact"},{"name":"pediatric ovarian mature teratoma","type":"exact"}],"termid":"MONDO:0003818","xrefs":{"Monarch":{"xref_id":"0003818"}}}


id: PBO:0066580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of hemoglobinization and erythroid cell expansion","termid":"PBO:0066580"}


id: GO:1990371
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A response that results in a state of tolerance to phenol.","definition_xrefs":["GOC:mengo_curators","PMID:23356676"],"gene_count":0,"genotype_count":0,"name":"obsolete process resulting in tolerance to phenol (obsolete GO:1990371)","termid":"GO:1990371"}


id: GO:0050123
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acyl-D-mannosamine + NAD+ = N-acyl-D-mannosaminolactone + H+ + NADH.","definition_xrefs":["EC:1.1.1.233","RHEA:11540"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"N-acylmannosamine 1-dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R02651","MetaCyc:N-ACYLMANNOSAMINE-1-DEHYDROGENASE-RXN"],"synonyms":[{"name":"N-acetyl-D-mannosamine dehydrogenase activity","type":"related"},{"name":"N-acyl-D-mannosamine dehydrogenase activity","type":"related"},{"name":"N-acyl-D-mannosamine:NAD+ 1-oxidoreductase activity","type":"related"},{"name":"N-acylmannosamine dehydrogenase activity","type":"related"}],"termid":"GO:0050123"}


id: GO:0010197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The merging of the polar nuclei, the two nuclei contained within the same cell that are created from the mitotic division of the megaspore during angiosperm reproduction. Polar nuclear fusion takes place in the ovule, forming in the fusion nucleus and giving rise to the endosperm when fertilized.","definition_xrefs":["GOC:sm","GOC:mtg_plant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"karyogamy","termid":"GO:0000741"},{"relation_name":"part_of","term_name":"embryo sac central cell differentiation","termid":"GO:0009559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"polar nucleus fusion","termid":"GO:0010197"}


id: PBO:0088111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar aminopeptidase Y; processed to mature form by Prb1p","termid":"PBO:0088111"}


id: PATO:0000213
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000213 neurobehavioral function (obsolete PATO:0000213)","termid":"PATO:0000213"}


id: MONDO:0000513
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A ameloblastoma that involves the bone tissue.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone benign neoplasm","termid":"MONDO:0000631"},{"relation_name":"is_a","term_name":"ameloblastoma","termid":"MONDO:0017795"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone ameloblastoma","secondary_identifiers":["DOID:0050895"],"synonyms":[{"name":"ameloblastoma of bone tissue","type":"exact"},{"name":"bone tissue ameloblastoma","type":"exact"}],"termid":"MONDO:0000513","xrefs":{"Monarch":{"xref_id":"0000513"}}}


id: GO:1905305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cardiac myofibril assembly.","definition_xrefs":["GO_REF:0000058","GOC:BHF","PMID:16151019","GOC:TermGenie","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytoskeleton organization","termid":"GO:0051494"},{"relation_name":"is_a","term_name":"negative regulation of organelle assembly","termid":"GO:1902116"},{"relation_name":"is_a","term_name":"negative regulation of supramolecular fiber organization","termid":"GO:1902904"},{"relation_name":"is_a","term_name":"regulation of cardiac myofibril assembly","termid":"GO:1905304"},{"relation_name":"is_a","term_name":"negative regulation of cardiac muscle cell differentiation","termid":"GO:2000726"},{"relation_name":"negatively_regulates","term_name":"cardiac myofibril assembly","termid":"GO:0055003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"negatively_regulates","termid":"GO:0030036"},{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0030036","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiac myofibril assembly","synonyms":[{"name":"down regulation of cardiac myofibril assembly","type":"exact"},{"name":"down regulation of cardiac myofibril development","type":"exact"},{"name":"down regulation of cardiac myofibril morphogenesis","type":"exact"},{"name":"down regulation of heart myofibril assembly","type":"related"},{"name":"down-regulation of cardiac myofibril assembly","type":"exact"},{"name":"down-regulation of cardiac myofibril development","type":"exact"},{"name":"down-regulation of cardiac myofibril morphogenesis","type":"exact"},{"name":"down-regulation of heart myofibril assembly","type":"related"},{"name":"downregulation of cardiac myofibril assembly","type":"exact"},{"name":"downregulation of cardiac myofibril development","type":"exact"},{"name":"downregulation of cardiac myofibril morphogenesis","type":"exact"},{"name":"downregulation of heart myofibril assembly","type":"related"},{"name":"inhibition of cardiac myofibril assembly","type":"narrow"},{"name":"inhibition of cardiac myofibril development","type":"narrow"},{"name":"inhibition of cardiac myofibril morphogenesis","type":"narrow"},{"name":"inhibition of heart myofibril assembly","type":"related"},{"name":"negative regulation of cardiac myofibril development","type":"exact"},{"name":"negative regulation of cardiac myofibril morphogenesis","type":"exact"},{"name":"negative regulation of heart myofibril assembly","type":"related"}],"termid":"GO:1905305"}


id: MONDO:0011920
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant nonsyndromic deafness in which the cause of the disease is a mutation in the MYO1A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0019497"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 48","secondary_identifiers":["DOID:0110571","GARD:18120","OMIM:607841","MESH:C564322","MEDGEN:375052","UMLS:C1842939"],"synonyms":[{"name":"DFNA48","type":"narrow"},{"name":"MYO1A autosomal dominant nonsyndromic deafness","type":"narrow"},{"name":"autosomal dominant deafness 48","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 48","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness caused by mutation in MYO1A","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 48","type":"narrow"},{"name":"deafness, autosomal dominant 48","type":"narrow"},{"name":"deafness, autosomal dominant type 48","type":"narrow"}],"termid":"MONDO:0011920","xrefs":{"Monarch":{"xref_id":"0011920"}}}


id: MONDO:0018234
data:
  {"annotated_genes":["SJAG_03249","SJAG_00539","SJAG_02165","SJAG_02431","SJAG_04270","SJAG_00414","SJAG_00197","SJAG_00504","SJAG_00322","SJAG_03484","SJAG_04825","SJAG_03703","SJAG_02200","SJAG_04092","SJAG_04995","SJAG_03144","SJAG_01852"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86904],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014651"},{"annotations":[87929,87930],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013895"},{"annotations":[87393],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008726"},{"annotations":[86867],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020667"},{"annotations":[86783],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014700"},{"annotations":[87216],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014558"},{"annotations":[87323,87322],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009039"},{"annotations":[88104,88105],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012137"},{"annotations":[87509,87508],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958175"},{"annotations":[88196],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011640"},{"annotations":[88404],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013740"},{"annotations":[87758],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012516"},{"annotations":[86961],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007943"},{"annotations":[87186],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009903"},{"annotations":[87345,87346],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009955"},{"annotations":[88897],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010121"}]},"cv_name":"mondo","definition":"A group of disorders in which the skeletal involvement is predominantly manifested as abnormalities of individual bones or in a group of bones.","direct_ancestors":[{"relation_name":"is_a","term_name":"bone development disease","termid":"MONDO:0005497"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00197":null,"SJAG_00322":null,"SJAG_00414":null,"SJAG_00504":null,"SJAG_00539":null,"SJAG_01852":null,"SJAG_02165":null,"SJAG_02200":null,"SJAG_02431":null,"SJAG_03144":null,"SJAG_03249":null,"SJAG_03484":null,"SJAG_03703":null,"SJAG_04092":null,"SJAG_04270":null,"SJAG_04825":null,"SJAG_04995":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"dysostosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:21571","Orphanet:364559","MESH:D004413","DOID:1934","UMLS:C0013393","ICD9:756.9","SCTID:109420003","NCIT:C34560","MEDGEN:4430"],"synonyms":[{"name":"dysostosis","type":"exact"}],"termid":"MONDO:0018234","terms_by_termid":{"MONDO:0007943":null,"MONDO:0008726":null,"MONDO:0009039":null,"MONDO:0009903":null,"MONDO:0009955":null,"MONDO:0010121":null,"MONDO:0011640":null,"MONDO:0012137":null,"MONDO:0012516":null,"MONDO:0013740":null,"MONDO:0013895":null,"MONDO:0014558":null,"MONDO:0014651":null,"MONDO:0014700":null,"MONDO:0020667":null,"MONDO:0958175":null},"xrefs":{"Monarch":{"xref_id":"0018234"}}}


id: PBO:0076684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor A like 3","termid":"PBO:0076684"}


id: MONDO:0017604
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A usually indolent mature B-cell lymphoma, arising from the marginal zone of lymphoid tissues. It is characterized by the presence of small to medium sized atypical lymphocytes. It comprises three entities, according to the anatomic sites involved: extranodal marginal zone B-cell lymphoma of mucosa-associated lymphoid tissue, which affects extranodal sites (most often stomach, lung, skin, and ocular adnexa); nodal marginal zone B-cell lymphoma, which affects lymph nodes without evidence of extranodal disease; and splenic marginal zone B-cell lymphoma, which affects the spleen and splenic hilar lymph nodes, bone marrow, and often the peripheral blood.","definition_xrefs":["NCIT:C4341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indolent B-cell non-Hodgkin lymphoma","termid":"MONDO:0017594"},{"relation_name":"is_a","term_name":"spleen neoplasm","termid":"MONDO:0036696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"marginal zone lymphoma","secondary_identifiers":["SCTID:447100004","DOID:0050748","GARD:13237","EFO:1000630","ICDO:9699/3","ONCOTREE:MZL","Orphanet:300912","UMLS:C1367654","MEDGEN:277950"],"synonyms":[{"name":"MZBCL","type":"exact"},{"name":"MZL","type":"exact"},{"name":"lymphoma of marginal zone B cell","type":"exact"},{"name":"marginal zone B cell lymphoma","type":"exact"},{"name":"marginal zone B-cell lymphoma","type":"exact"},{"name":"marginal zone lymphoma","type":"exact"}],"termid":"MONDO:0017604","xrefs":{"Monarch":{"xref_id":"0017604"}}}


id: PBO:0005144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Holliday junction resolvase subunit Mus81","termid":"PBO:0005144"}


id: GO:0098995
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disruption by a symbiont of host cell wall lipopolysaccharides to allow entry into the host cell. For example a phage entering a Gram-negative bacterium may actively break down outer membrane lipopolysaccharides.","definition_xrefs":["GOC:dos","VZ:3940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated disruption of host cell wall","termid":"GO:0052009"},{"relation_name":"part_of","term_name":"symbiont entry into host cell","termid":"GO:0046718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont entry into host cell via disruption of host cell envelope lipopolysaccharide","secondary_identifiers":["VZ:3939"],"synonyms":[{"name":"degradation of host cell envelope lipopolysaccharide during viral entry","type":"exact"},{"name":"degradation of host lipopolysaccharide during virus entry","type":"exact"},{"name":"disassembly by virus of outer membrane lipopolysaccharide during viral entry","type":"narrow"},{"name":"disruption by virus of host envelope lipopolysaccharide during virus entry","type":"exact"}],"termid":"GO:0098995"}


id: _global:is_kinase_activity
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_interaction_relation_helper_property","termid":"_global:molecular_interaction_relation_helper_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_kinase_activity","secondary_identifiers":["RO:0002481"],"termid":"_global:is_kinase_activity"}


id: GO:1902843
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of netrin-activated signaling pathway.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:24004945","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of netrin-activated signaling pathway","termid":"GO:1902841"},{"relation_name":"positively_regulates","term_name":"netrin-activated signaling pathway","termid":"GO:0038007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of netrin-activated signaling pathway","synonyms":[{"name":"activation of netrin signaling pathway","type":"narrow"},{"name":"activation of netrin-activated signal transduction pathway","type":"narrow"},{"name":"activation of netrin-activated signaling pathway","type":"narrow"},{"name":"activation of netrin-activated signalling pathway","type":"narrow"},{"name":"activation of netrin-mediated signaling pathway","type":"narrow"},{"name":"positive regulation of netrin signaling pathway","type":"exact"},{"name":"positive regulation of netrin-activated signal transduction pathway","type":"exact"},{"name":"positive regulation of netrin-activated signalling pathway","type":"exact"},{"name":"positive regulation of netrin-mediated signaling pathway","type":"exact"},{"name":"up regulation of netrin signaling pathway","type":"exact"},{"name":"up regulation of netrin-activated signal transduction pathway","type":"exact"},{"name":"up regulation of netrin-activated signaling pathway","type":"exact"},{"name":"up regulation of netrin-activated signalling pathway","type":"exact"},{"name":"up regulation of netrin-mediated signaling pathway","type":"exact"},{"name":"up-regulation of netrin signaling pathway","type":"exact"},{"name":"up-regulation of netrin-activated signal transduction pathway","type":"exact"},{"name":"up-regulation of netrin-activated signaling pathway","type":"exact"},{"name":"up-regulation of netrin-activated signalling pathway","type":"exact"},{"name":"up-regulation of netrin-mediated signaling pathway","type":"exact"},{"name":"upregulation of netrin signaling pathway","type":"exact"},{"name":"upregulation of netrin-activated signal transduction pathway","type":"exact"},{"name":"upregulation of netrin-activated signaling pathway","type":"exact"},{"name":"upregulation of netrin-activated signalling pathway","type":"exact"},{"name":"upregulation of netrin-mediated signaling pathway","type":"exact"}],"termid":"GO:1902843"}


id: GO:0015757
data:
  {"annotated_genes":["SJAG_00057"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112497],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140425"}]},"cv_name":"biological_process","definition":"The process in which galactose is transported across a lipid bilayer, from one side of a membrane to the other. D-galactose is widely distributed in combined form in plants, animals and microorganisms as a constituent of oligo- and polysaccharides; it also occurs in galactolipids and as its glucoside in lactose and melibiose.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose transmembrane transport","termid":"GO:0008645"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00057":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"galactose transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"galactose transport","type":"related"}],"termid":"GO:0015757","terms_by_termid":{"GO:0140425":null}}


id: PBO:0063616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1","termid":"PBO:0063616"}


id: MONDO:0012534
data:
  {"annotated_genes":["SJAG_03461"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87644],"is_not":false,"summary":null,"term":"MONDO:0012534"}]},"cv_name":"mondo","definition":"Combined oxidative phosphorylation defect type 4 is a rare mitochondrial disorder due to a defect in mitochondrial protein synthesis characterized by a neonatal onset of severe metabolic acidosis and respiratory distress, persistent lactic acidosis with episodes of metabolic crises, developmental regression, microcephaly, abnormal gaze fixation and pursuit, axial hypotonia with limb spasticity and reduced spontaneous movements. Neuroimaging studies reveal polymicrogyria, white matter abnormalities and multiple cystic brain lesions, including basal ganglia, and cerebral atrophy. Decreased activity of complex I and IV have been determined in muscle biopsy.","definition_xrefs":["Orphanet:254925"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03461":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"combined oxidative phosphorylation defect type 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:387884","OMIM:610678","DOID:0111494","SCTID:766876004","GARD:17233","UMLS:C1857682","MESH:C565690"],"synonyms":[{"name":"COXPD4","type":"exact"},{"name":"TUFM combined oxidative phosphorylation deficiency","type":"exact"},{"name":"combined oxidative phosphorylation defect type 4","type":"exact"},{"name":"combined oxidative phosphorylation deficiency 4","type":"related"},{"name":"combined oxidative phosphorylation deficiency caused by mutation in TUFM","type":"exact"},{"name":"combined oxidative phosphorylation deficiency type 4","type":"exact"}],"termid":"MONDO:0012534","terms_by_termid":{"MONDO:0012534":null},"xrefs":{"Monarch":{"xref_id":"0012534"}}}


id: GO:0032453
data:
  {"annotated_genes":["SJAG_03635","SJAG_03286"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71862,76691],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034647"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of a methyl group from a modified lysine residue at position 4 of the histone H3 protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3 demethylase activity","termid":"GO:0141052"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03286":null,"SJAG_03635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0032452"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0032452","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"histone H3K4 demethylase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-9822467","Reactome:R-HSA-9822461"],"synonyms":[{"name":"histone H3-K4 demethylase activity","type":"exact"},{"name":"histone H3-methyl-lysine-4 demethylase activity","type":"exact"},{"name":"histone demethylase activity (H3-K4 specific)","type":"exact"},{"name":"histone demethylase activity (H3K4-specific)","type":"exact"}],"termid":"GO:0032453","terms_by_termid":{"GO:0034647":null}}


id: PBO:0073574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SHISA5 pseudogene 2","termid":"PBO:0073574"}


id: PBO:0041820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carnosine N-methyltransferase 1","termid":"PBO:0041820"}


id: PBO:0043186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"citron rho-interacting serine/threonine kinase","termid":"PBO:0043186"}


id: PBO:0029119
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mononucleate_cell_with_increased_DNA_content_during_stationary_phase","termid":"PBO:0029119"}


id: MONDO:0019644
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Unilateral renal dysplasia is a form of renal dysplasia (RD), a renal tract malformation in which the development of one kidney is abnormal and incomplete. Unilateral RD can be segmental, and of variable severity, with renal aplasia corresponding to extreme RD.","definition_xrefs":["Orphanet:93172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal dysplasia","termid":"MONDO:0019638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"renal dysplasia, unilateral","secondary_identifiers":["HP:0008718","UMLS:C0431697","GARD:19177","MEDGEN:140916"],"synonyms":[{"name":"unilateral renal dysplasia","type":"exact"}],"termid":"MONDO:0019644","xrefs":{"Monarch":{"xref_id":"0019644"}}}


id: GO:1901383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of chorionic trophoblast cell proliferation.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"is_a","term_name":"regulation of chorionic trophoblast cell proliferation","termid":"GO:1901382"},{"relation_name":"negatively_regulates","term_name":"chorionic trophoblast cell proliferation","termid":"GO:0097360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of chorionic trophoblast cell proliferation","synonyms":[{"name":"down regulation of chorionic trophoblast cell proliferation","type":"exact"},{"name":"down-regulation of chorionic trophoblast cell proliferation","type":"exact"},{"name":"downregulation of chorionic trophoblast cell proliferation","type":"exact"},{"name":"inhibition of chorionic trophoblast cell proliferation","type":"narrow"}],"termid":"GO:1901383"}


id: GO:0043266
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of potassium ions (K+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metal ion transport","termid":"GO:0010959"},{"relation_name":"regulates","term_name":"potassium ion transport","termid":"GO:0006813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of potassium ion transport","synonyms":[{"name":"regulation of K+ conductance","type":"narrow"},{"name":"regulation of K+ transport","type":"exact"},{"name":"regulation of potassium conductance","type":"narrow"},{"name":"regulation of potassium ion conductance","type":"narrow"},{"name":"regulation of potassium transport","type":"exact"}],"termid":"GO:0043266"}


id: GO:0001711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell differentiation process that results in commitment of a cell to become part of the endoderm.","definition_xrefs":["GOC:go_curators","ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment involved in formation of primary germ layer","termid":"GO:0060795"},{"relation_name":"part_of","term_name":"endodermal cell differentiation","termid":"GO:0035987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endodermal cell fate commitment","synonyms":[{"name":"endoderm cell fate commitment","type":"exact"}],"termid":"GO:0001711"}


id: GO:0003794
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete acute-phase response protein activity (obsolete GO:0003794)","synonyms":[{"name":"acute-phase response protein activity","type":"exact"}],"termid":"GO:0003794"}


id: MONDO:1010019
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Arrhythmogenic right ventricular cardiomyopathy that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiomyopathy, non-human animal","termid":"MONDO:1010010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrhythmogenic right ventricular cardiomyopathy, non-human animal","secondary_identifiers":["OMIA:000878"],"termid":"MONDO:1010019","xrefs":{"Monarch":{"xref_id":"1010019"}}}


id: MONDO:0045038
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cutaneous mycosis","termid":"MONDO:0000254"},{"relation_name":"is_a","term_name":"basidiobolomycosis","termid":"MONDO:0000302"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cutaneous basidiobolomycosis","secondary_identifiers":["MEDGEN:575967","SCTID:240786004","UMLS:C0343966"],"termid":"MONDO:0045038","xrefs":{"Monarch":{"xref_id":"0045038"}}}


id: MONDO:0025505
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A highly contagious parvovirus infection in mink, caused by mink enteritis virus or the closely related feline panleukopenia virus or canine parvovirus. Transmission usually occurs by the fecal/oral route.","definition_xrefs":["MESH:D053489"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Parvoviridae infectious disease, non-human animal","termid":"MONDO:0700206"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mink viral enteritis","synonyms":[{"name":"enteritides, mink viral","type":"exact"},{"name":"enteritis, infectious, of mink","type":"exact"},{"name":"enteritis, mink viral","type":"exact"},{"name":"mink viral enteritides","type":"exact"},{"name":"viral enteritides, mink","type":"exact"},{"name":"viral enteritis, mink","type":"exact"}],"termid":"MONDO:0025505","xrefs":{"Monarch":{"xref_id":"0025505"}}}


id: GO:1900537
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of glucose homeostasis.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of glucose homeostasis (obsolete GO:1900537)","synonyms":[{"name":"down regulation of glucose homeostasis","type":"exact"},{"name":"down-regulation of glucose homeostasis","type":"exact"},{"name":"downregulation of glucose homeostasis","type":"exact"},{"name":"inhibition of glucose homeostasis","type":"narrow"},{"name":"negative regulation of glucose homeostasis","type":"exact"}],"termid":"GO:1900537"}


id: PBO:0065811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB3 GTPase activating protein catalytic subunit 1","termid":"PBO:0065811"}


id: GO:0050133
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(6)-hydroxy-L-lysine + acetyl-CoA = N(6)-acetyl-N(6)-hydroxy-L-lysine + CoA.","definition_xrefs":["EC:2.3.1.102","RHEA:22388"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"N6-hydroxylysine O-acetyltransferase activity","secondary_identifiers":["MetaCyc:N6-HYDROXYLYSINE-O-ACETYLTRANSFERASE-RXN","KEGG_REACTION:R03168"],"synonyms":[{"name":"N(6)-hydroxylysine acetylase activity","type":"related"},{"name":"N6-hydroxylysine acetylase activity","type":"related"},{"name":"N6-hydroxylysine:acetyl CoA N6-transacetylase activity","type":"related"},{"name":"acetyl-CoA:6-N-hydroxy-L-lysine 6-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:N6-hydroxy-L-lysine 6-acetyltransferase activity","type":"related"}],"termid":"GO:0050133"}


id: PR:Q10345
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1F12.03c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10345"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1F12.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F12.03c","synonyms":[{"name":"Spom972h-SPAC1F12.03c","type":"exact"}],"termid":"PR:Q10345"}


id: MOD:02031
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation, dHex Hex(4) HexNAc(5)","definition_xrefs":["PubMed:33135055","Unimod:1519"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"dHex1Hex4HexNAc5 N4-glycosylated asparagine","synonyms":[{"name":"dHex Hex(4) HexNAc(5)","type":"related"}],"termid":"MOD:02031"}


id: PBO:0029831
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_curved_stubby_septated_vegetative_cell","termid":"PBO:0029831"}


id: GO:0032394
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an MHC class Ib protein complex and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity. Class Ib here refers to non-classical class I molecules, such as those of the CD1 or HLA-E gene families.","definition_xrefs":["ISBN:0781735149","GOC:add","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"},{"relation_name":"is_a","term_name":"immune receptor activity","termid":"GO:0140375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"MHC class Ib receptor activity","synonyms":[{"name":"T cell receptor activity","type":"related"},{"name":"alpha-beta T cell receptor activity","type":"related"},{"name":"gamma-delta T cell receptor activity","type":"related"}],"termid":"GO:0032394"}


id: PBO:0052781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 19 pseudogene 4","termid":"PBO:0052781"}


id: GO:0090205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of cholesterol metabolism, the chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of steroid metabolic process","termid":"GO:0045940"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of cholesterol metabolic process","termid":"GO:0090181"},{"relation_name":"positively_regulates","term_name":"cholesterol metabolic process","termid":"GO:0008203"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cholesterol metabolic process","termid":"GO:0090205"}


id: GO:1900294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of heptasaccharide transport.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"heptasaccharide transport","termid":"GO:2001104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of heptasaccharide transport","termid":"GO:1900294"}


id: GO:0071593
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The adhesion of one lymphocyte to one or more other lymphocytes via adhesion molecules.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte aggregation","termid":"GO:0070486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"lymphocyte aggregation","termid":"GO:0071593"}


id: GO:0015373
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: monoatomic anion(out) + Na+(out) = monoatomic anion(in) + Na+(in).","definition_xrefs":["TC:2.A.21.5.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic anion:monoatomic cation symporter activity","termid":"GO:0015296"},{"relation_name":"is_a","term_name":"solute:sodium symporter activity","termid":"GO:0015370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"monoatomic anion:sodium symporter activity","synonyms":[{"name":"anion:sodium symporter activity","type":"broad"},{"name":"monovalent anion:sodium symporter activity","type":"related"}],"termid":"GO:0015373"}


id: PBO:0074779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 3 pseudogene 1","termid":"PBO:0074779"}


id: PBO:0001162
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human DRB1","termid":"PBO:0001162"}


id: PBO:0000575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor complex subunit, Fip1 homolog (predicted)","termid":"PBO:0000575"}


id: PBO:0050851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intercellular adhesion molecule 4 (Landsteiner-Wiener blood group)","termid":"PBO:0050851"}


id: PR:P87320
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- msp1 gene.","definition_xrefs":["UniProtKB:P87320","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein msp1, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1718.06","synonyms":[{"name":"Spom972h-msp1","type":"exact"}],"termid":"PR:P87320"}


id: MOD:00999
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:00404. Remap to MOD:00404.","definition_xrefs":["DeltaMass:90"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00999 homoseryl lactone (obsolete MOD:00999)","termid":"MOD:00999"}


id: MONDO:0045043
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease or disorder that involves the broad ligament of uterus.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligament disorder","termid":"MONDO:0045044"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disorder of uterine broad ligament","secondary_identifiers":["UMLS:C0404479","MEDGEN:589074","SCTID:237062006"],"synonyms":[{"name":"broad ligament of uterus disease","type":"exact"},{"name":"broad ligament of uterus disease or disorder","type":"exact"},{"name":"disease of broad ligament of uterus","type":"exact"},{"name":"disease or disorder of broad ligament of uterus","type":"exact"},{"name":"disorder of broad ligament","type":"exact"},{"name":"disorder of broad ligament of uterus","type":"exact"}],"termid":"MONDO:0045043","xrefs":{"Monarch":{"xref_id":"0045043"}}}


id: GO:1902758
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of bis(molybdopterin guanine dinucleotide)molybdenum.","definition_xrefs":["GOC:TermGenie","PMID:23201473","GOC:dph","GO_REF:0000068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Mo-molybdopterin cofactor biosynthetic process","termid":"GO:0006777"},{"relation_name":"is_a","term_name":"nucleotide biosynthetic process","termid":"GO:0009165"},{"relation_name":"is_a","term_name":"bis(molybdopterin guanine dinucleotide)molybdenum metabolic process","termid":"GO:1902757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"bis(molybdopterin guanine dinucleotide)molybdenum biosynthetic process","secondary_identifiers":["MetaCyc:PWY-5964","GO:0061600"],"synonyms":[{"name":"bis(molybdopterin guanine dinucleotide)molybdenum anabolism","type":"exact"},{"name":"bis(molybdopterin guanine dinucleotide)molybdenum biosynthesis","type":"exact"},{"name":"bis(molybdopterin guanine dinucleotide)molybdenum formation","type":"exact"},{"name":"bis(molybdopterin guanine dinucleotide)molybdenum synthesis","type":"exact"},{"name":"bis-Mo-molybdopterin-guanine dinucleotide cofactor biosynthetic process","type":"exact"}],"termid":"GO:1902758"}


id: MONDO:0007763
data:
  {"annotated_genes":["SJAG_03787","SJAG_00440","SJAG_02231"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88573,88574,88575],"is_not":false,"summary":null,"term":"MONDO:0007763"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"renal cell carcinoma","termid":"MONDO:0005086"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00440":null,"SJAG_02231":null,"SJAG_03787":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005240"],"is_obsolete":false,"name":"nonpapillary renal cell carcinoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:144700","DOID:0050387"],"synonyms":[{"name":"CCRCC","type":"narrow"},{"name":"RCC","type":"related"},{"name":"adenocarcinoma of kidney","type":"related"},{"name":"clear cell renal cell adenocarcinoma","type":"narrow"},{"name":"clear cell renal cell carcinoma","type":"narrow"},{"name":"hypernephroma","type":"related"},{"name":"nonpapillary renal carcinoma 1 locus","type":"related"},{"name":"renal carcinoma, chromophobe, somatic","type":"exact"},{"name":"renal cell carcinoma","type":"broad"},{"name":"renal cell carcinoma, clear cell","type":"exact"},{"name":"renal cell carcinoma, clear cell, somatic","type":"exact"},{"name":"renal cell carcinoma, nonpapillary","type":"related"},{"name":"renal cell carcinoma, somatic","type":"exact"}],"termid":"MONDO:0007763","terms_by_termid":{"MONDO:0007763":null},"xrefs":{"Monarch":{"xref_id":"0007763"}}}


id: FYECO:0000115
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which guanosine triphosphate was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ GTP","synonyms":[{"name":"+ guanosine triphosphate","type":"exact"}],"termid":"FYECO:0000115"}


id: MONDO:0022510
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atlanto-axial fusion","secondary_identifiers":["MESH:C538196"],"synonyms":[{"name":"atlantoaxial fusion","type":"related"},{"name":"atlantoaxial joint fusion","type":"related"}],"termid":"MONDO:0022510","xrefs":{"Monarch":{"xref_id":"0022510"}}}


id: PBO:0042435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 42","termid":"PBO:0042435"}


id: GO:0042498
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a lipopeptide containing a nonprotein moiety consisting of two acyl groups.","definition_xrefs":["PMID:12077222","PMID:12524386","PMID:2757794","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipopeptide binding","termid":"GO:0071723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0008289","GO:0005488"],"is_obsolete":false,"name":"diacyl lipopeptide binding","synonyms":[{"name":"bacterial diacyl lipopeptide binding","type":"narrow"},{"name":"bacterial diacyl lipoprotein binding","type":"related"},{"name":"diacylated lipopeptide binding","type":"exact"}],"termid":"GO:0042498"}


id: PBO:0060336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin VB pseudogene 1","termid":"PBO:0060336"}


id: PR:O43002
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein transport protein Sec61 subunit beta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13509:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein sec61 subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G2.03c","secondary_identifiers":["UniProtKB:O43002"],"synonyms":[{"name":"SPBC2G2.03c","type":"related"},{"name":"Spom972h-SEC61B","type":"exact"}],"termid":"PR:O43002"}


id: MONDO:1030008
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mitral valve disorder characterized by incomplete valve closure.","definition_xrefs":["NCIT:C50888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitral valve disorder","termid":"MONDO:0003767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"mitral valve insufficiency","secondary_identifiers":["MEDGEN:7670","UMLS:C0026266","MESH:D008944","DOID:11502"],"synonyms":[{"name":"congenital insufficiency of mitral valve","type":"narrow"},{"name":"congenital mitral insufficiency","type":"narrow"},{"name":"congenital mitral regurgitation","type":"narrow"},{"name":"insufficiency, mitral","type":"exact"},{"name":"mitral insufficiency","type":"exact"},{"name":"mitral regurgitation","type":"exact"},{"name":"mitral valve incompetence","type":"exact"},{"name":"mitral valve insufficiency/ regurgitation","type":"exact"}],"termid":"MONDO:1030008","xrefs":{"Monarch":{"xref_id":"1030008"}}}


id: GO:0044393
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A dynamic, actin-rich projection extending from the surface of a migrating animal cell.","definition_xrefs":["PMID:11429692","PMID:12153987","PMID:19095735"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection","termid":"GO:0120025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"microspike","termid":"GO:0044393"}


id: PR:Q9P6R9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pre-mRNA-splicing factor CWC22 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR18034:SF3","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor cwf22 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13E7.01","secondary_identifiers":["UniProtKB:Q9P6R9"],"synonyms":[{"name":"SPBC13E7.01","type":"related"},{"name":"Spom972h-CWC22","type":"exact"},{"name":"complexed with cdc5 protein 22 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6R9"}


id: GO:0009322
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. An enzyme complex that catalyzes the reduction of trimethylamine N-oxide to trimethylamine.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete trimethylamine-N-oxide reductase complex (obsolete GO:0009322)","termid":"GO:0009322"}


id: GO:0015675
data:
  {"annotated_genes":["SJAG_04830"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[81670],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098716"}]},"cv_name":"biological_process","definition":"The directed movement of nickel (Ni) cations into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion transport","termid":"GO:0000041"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04830":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"nickel cation transport","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0015675","terms_by_termid":{"GO:0098716":null}}


id: GO:0048370
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the lateral mesoderm. This process pertains to the initial formation of the structure from unspecified parts.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesoderm formation","termid":"GO:0001707"},{"relation_name":"part_of","term_name":"lateral mesoderm morphogenesis","termid":"GO:0048369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral mesoderm formation","secondary_identifiers":["Reactome:R-HSA-9758920"],"synonyms":[{"name":"lateral plate mesoderm biosynthesis","type":"exact"},{"name":"lateral plate mesoderm formation","type":"exact"}],"termid":"GO:0048370"}


id: PBO:0058998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malonyl-CoA decarboxylase","termid":"PBO:0058998"}


id: FYECO:0000414
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in rich medium containing xylose as the carbon source, yeast extract and other components. The concentration of xylose is typically around 2%.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping rich medium","termid":"FYECO:0000080"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xylose YE","synonyms":[{"name":"xylose rich medium","type":"broad"}],"termid":"FYECO:0000414"}


id: PBO:0027878
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nucleosome_binding","termid":"PBO:0027878"}


id: PBO:0031901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRIP domain protein Grp2 (predicted)","termid":"PBO:0031901"}


id: GO:0001069
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a RNA region that regulates a nucleic acid-based process. Such processes include transcription, DNA replication, and DNA repair.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription regulatory region nucleic acid binding","termid":"GO:0001067"},{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003723"],"is_obsolete":false,"name":"regulatory region RNA binding","termid":"GO:0001069"}


id: GO:0031672
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The dark-staining region of a sarcomere, in which myosin thick filaments are present; the center is traversed by the paler H zone, which in turn contains the M line.","definition_xrefs":["ISBN:0321204131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"sarcomere","termid":"GO:0030017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"A band","secondary_identifiers":["Wikipedia:Sarcomere#bands"],"synonyms":[{"name":"A disc","type":"exact"},{"name":"Q disc","type":"exact"},{"name":"anisotropic disc","type":"exact"},{"name":"transverse disc","type":"exact"}],"termid":"GO:0031672"}


id: FYPO:0000573
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mating projection assembly is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal shmoo formation","synonyms":[{"name":"normal conjugation tube formation","type":"exact"},{"name":"normal mating projection assembly","type":"exact"},{"name":"normal mating projection formation","type":"exact"},{"name":"normal shmoo assembly","type":"exact"},{"name":"shmoo formation: normal","type":"related"}],"termid":"FYPO:0000573"}


id: SO:0001446
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polar, hydorophilic amino acid encoded by the codons TAT and TAC.","direct_ancestors":[{"relation_name":"is_a","term_name":"amino_acid","termid":"SO:0001237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine","synonyms":[{"name":"Tyr","type":"exact"},{"name":"Y","type":"exact"}],"termid":"SO:0001446"}


id: PBO:0039749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein O like","termid":"PBO:0039749"}


id: PBO:0062643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily M member 1 pseudogene","termid":"PBO:0062643"}


id: GO:2000106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of leukocyte apoptotic process.","definition_xrefs":["GOC:BHF","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process","termid":"GO:0042981"},{"relation_name":"regulates","term_name":"leukocyte apoptotic process","termid":"GO:0071887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of leukocyte apoptotic process","synonyms":[{"name":"regulation of leukocyte apoptosis","type":"narrow"}],"termid":"GO:2000106"}


id: PBO:0034765
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"This gene product was previously annotated to respiratory chain NADH dehydrogenase complex. This annotation was removed because fission yeast lacks the remaining 40 subunits found in mammals (PMID:1518044).","termid":"PBO:0034765"}


id: PBO:0065252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 20E","termid":"PBO:0065252"}


id: GO:0019686
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways by which a purine nucleoside is synthesized from another purine nucleoside.","definition_xrefs":["ISBN:0306444747","GOC:mah","ISBN:0471394831"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase-containing small molecule interconversion","termid":"GO:0015949"},{"relation_name":"is_a","term_name":"purine nucleoside metabolic process","termid":"GO:0042278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"purine nucleoside interconversion","termid":"GO:0019686"}


id: GO:0034887
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1,4-dihydroisonicotinate + O2 = gamma-N-formylaminovinylacetaldehyde + CO2.","definition_xrefs":["UM-BBD_reactionID:r1348"],"gene_count":0,"genotype_count":0,"name":"obsolete 1,4-dihydroisonicotinate 2,3-dioxygenase activity (obsolete GO:0034887)","synonyms":[{"name":"1,4-dihydroisonicotinate 2,3-dioxygenase activity","type":"exact"}],"termid":"GO:0034887"}


id: MONDO:0009501
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Metabolic myopathy due to lactate transporter defect is a rare metabolic myopathy characterized by muscle cramping and/or stiffness after exercise (especially during heat exposure), post-exertional rhabdomyolysis and myoglobinuria, and elevation of serum creatine kinase.","definition_xrefs":["Orphanet:171690"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic myopathy","termid":"MONDO:0020123"},{"relation_name":"is_a","term_name":"hereditary skeletal muscle disorder","termid":"MONDO:0700223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"metabolic myopathy due to lactate transporter defect","secondary_identifiers":["GARD:17067","MEDGEN:344529","SCTID:766715000","OMIM:245340","UMLS:C1855577","MESH:C565449"],"synonyms":[{"name":"erythrocyte lactate transporter defect","type":"exact"},{"name":"lactate transporter defect, myopathy due to","type":"related"}],"termid":"MONDO:0009501","xrefs":{"Monarch":{"xref_id":"0009501"}}}


id: GO:0017198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The acetylation of the N-terminal serine of proteins to form the derivative N-acetyl-L-serine.","definition_xrefs":["RESID:AA0051"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal peptidyl-serine acetylation (obsolete GO:0017198)","termid":"GO:0017198"}


id: PBO:0111881
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PINc domain","termid":"PBO:0111881"}


id: PBO:0017724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spa2 interacting protein Pos1","termid":"PBO:0017724"}


id: PBO:0059564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 1H","termid":"PBO:0059564"}


id: PBO:0090415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Dbl8","termid":"PBO:0090415"}


id: FYPO:0007929
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to phloxine B. Cells stop growing (and may die) at a concentration of phloxine B that allows wild type cells to grow.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0001985","FYPO:0000003","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to phloxine B","synonyms":[{"name":"sensitive to phloxine B during vegetative growth","type":"exact"}],"termid":"FYPO:0007929"}


id: MONDO:0005045
data:
  {"annotated_genes":["SJAG_03145","SJAG_02785","SJAG_03077","SJAG_01181","SJAG_00993","SJAG_03453","SJAG_00547","SJAG_02431","SJAG_02342","SJAG_01665","SJAG_02536","SJAG_03126","SJAG_03703","SJAG_02923","SJAG_00228"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87605],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:8000015"},{"annotations":[86792],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014112"},{"annotations":[86794,86793,86795],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014113"},{"annotations":[86799,86798,86800],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014114"},{"annotations":[87478],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012557"},{"annotations":[86971],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009026"},{"annotations":[86950,86949],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008647"},{"annotations":[88237],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012112"},{"annotations":[87999],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012799"},{"annotations":[88246,88247],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013197"},{"annotations":[87125],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010946"},{"annotations":[88242],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012111"},{"annotations":[89074,89075,89076],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008104"},{"annotations":[87558],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033669"},{"annotations":[88441],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012371"},{"annotations":[88232],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013186"},{"annotations":[87295,87296],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054588"}]},"cv_name":"mondo","definition":"A condition in which the myocardium is hypertrophied without an obvious cause. The hypertrophy is generally asymmetric and may be associated with obstruction of the ventricular outflow tract.","definition_xrefs":["NCIT:C34449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intrinsic cardiomyopathy","termid":"MONDO:0000591"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00228":null,"SJAG_00547":null,"SJAG_00993":null,"SJAG_01181":null,"SJAG_01665":null,"SJAG_02342":null,"SJAG_02431":null,"SJAG_02536":null,"SJAG_02785":null,"SJAG_02923":null,"SJAG_03077":null,"SJAG_03126":null,"SJAG_03145":null,"SJAG_03453":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"hypertrophic cardiomyopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:2881","NANDO:1200286","NANDO:2201042","NANDO:1200288","ICD9:425.4","ICD9:425.1","MESH:D002312","Orphanet:217569","NANDO:2100054","EFO:0000538","ICD10CM:I42.2","icd11.foundation:1830681485","ICD9:425.11","ICD10CM:I42.1","NANDO:2200229","SCTID:233873004","DOID:11984","UMLS:C0007194","MedDRA:10020871","HP:0001639"],"synonyms":[{"name":"HCM - hypertrophic cardiomyopathy","type":"related"},{"name":"familial hypertrophic cardiomyopathy","type":"narrow"},{"name":"hypertrophic cardiomyopathy","type":"exact"},{"name":"hypertrophic obstructive cardiomyopathy","type":"exact"},{"name":"hypertrophic subaortic stenosis","type":"exact"},{"name":"obstructive hypertrophic cardiomyopathy","type":"exact"}],"termid":"MONDO:0005045","terms_by_termid":{"MONDO:0008104":null,"MONDO:0008647":null,"MONDO:0009026":null,"MONDO:0010946":null,"MONDO:0012111":null,"MONDO:0012112":null,"MONDO:0012371":null,"MONDO:0012557":null,"MONDO:0012799":null,"MONDO:0013186":null,"MONDO:0013197":null,"MONDO:0014112":null,"MONDO:0014113":null,"MONDO:0014114":null,"MONDO:0033669":null,"MONDO:0054588":null,"MONDO:8000015":null},"xrefs":{"Monarch":{"xref_id":"0005045"}}}


id: FYPO:0002983
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of serine residues in one or more specific proteins, or of specific protein sites, does not occur during a cellular response to DNA damage.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete abolished protein serine phosphorylation during cellular response to DNA damage (obsolete FYPO:0002983)","synonyms":[{"name":"abolished protein serine phosphorylation during cellular response to DNA damage during mitotic cell cycle","type":"related"},{"name":"abolished protein serine phosphorylation during cellular response to DNA damage during vegetative growth","type":"exact"},{"name":"protein serine phosphorylation abolished during cellular response to DNA damage","type":"exact"}],"termid":"FYPO:0002983"}


id: MONDO:0009091
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Non-acquired combined pituitary hormone deficiency-sensorineural hearing loss-spine abnormalities syndrome is a rare, genetic, non-acquired, combined pituitary hormone deficiency disorder characterized by panhypopituitarism (with or without ACTH deficiency) associated with spine abnormalities, including frequent rigid cervical spine and short neck with limited rotation, and variable degrees of sensorineural hearing loss. The anterior pituitary gland is usually abnormal (typically hypoplastic) and rarely a mild developmental delay or intellectual disability may be associated.","definition_xrefs":["Orphanet:231720"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined pituitary hormone deficiencies, genetic form","termid":"MONDO:0013099"},{"relation_name":"is_a","term_name":"non-acquired combined pituitary hormone deficiency","termid":"MONDO:0018762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"non-acquired combined pituitary hormone deficiency with spine abnormalities","secondary_identifiers":["GARD:10603","MEDGEN:483740","OMIM:221750","MESH:C536710","UMLS:C3489787"],"synonyms":[{"name":"CPHD3","type":"related"},{"name":"Deafness, sensorineural with pituitary dwarfism","type":"related"},{"name":"Pituitary hormone deficiency, combined with rigid cervical spine","type":"related"},{"name":"Winkelmann-Bethge-Pfeiffer syndrome","type":"related"},{"name":"deafness, sensorineural, with pituitary dwarfism","type":"related"},{"name":"non-acquired combined pituitary hormone deficiency with spine abnormalities","type":"exact"},{"name":"non-acquired combined pituitary hormone deficiency-deafness-rigid cervical spine syndrome","type":"exact"},{"name":"non-acquired combined pituitary hormone deficiency-sensorineural hearing loss-spine abnormalities syndrome","type":"related"},{"name":"pituitary hormone deficiency, combined, 3","type":"related"},{"name":"pituitary hormone deficiency, combined, type 3","type":"exact"},{"name":"pituitary hormone deficiency, combined, with rigid cervical spine","type":"related"}],"termid":"MONDO:0009091","xrefs":{"Monarch":{"xref_id":"0009091"}}}


id: PBO:0113525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar aminopeptidase yscI; zinc metalloproteinase that belongs to peptidase family M18; often used as marker in studies of autophagy and cytosol to vacuole targeting (CVT) pathway; protein increases in abundance and relative distribution to cytoplasmic foci increases upon DNA replication stress; targeted to vacuole via Vps10p-dependent endosomal vacuolar protein sorting pathway and via CVT pathway","termid":"PBO:0113525"}


id: MONDO:0030890
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pontocerebellar hypoplasia","termid":"MONDO:0020135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"pontocerebellar hypoplasia, IIA 17","secondary_identifiers":["MEDGEN:1809583","OMIM:619909","UMLS:C5676999"],"synonyms":[{"name":"PCH17","type":"exact"},{"name":"pontocerebellar hypoplasia, IIA 17","type":"exact"}],"termid":"MONDO:0030890","xrefs":{"Monarch":{"xref_id":"0030890"}}}


id: PBO:0079648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 S pseudogene 1","termid":"PBO:0079648"}


id: PBO:0082231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha' catalytic subunit of casein kinase 2 (CK2); CK2 is a Ser/Thr protein kinase with roles in cell growth and proliferation; CK2, comprised of CKA1, CKA2, CKB1 and CKB2, has many substrates including transcription factors and all RNA polymerases; protein abundance increases in response to DNA replication stress; regulates Fkh1p-mediated donor preference during mating-type switching","termid":"PBO:0082231"}


id: PBO:0048005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FERM domain containing 5","termid":"PBO:0048005"}


id: PBO:0075737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRP14 pseudogene 5","termid":"PBO:0075737"}


id: MONDO:0020305
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Isochromosomy Yq is a rare gonosomy anomaly with a variable phenotype including a female phenotype with sexual development delay, streak gonads, short stature and Turner syndrome features and male phenotype with infertility due to azoospermia.","definition_xrefs":["Orphanet:98798"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isochromosome Y","termid":"MONDO:0019935"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isochromosomy Yq","secondary_identifiers":["GARD:19580","UMLS:C4749291","MEDGEN:1665766"],"termid":"MONDO:0020305","xrefs":{"Monarch":{"xref_id":"0020305"}}}


id: GO:0048311
data:
  {"annotated_genes":["SJAG_01741","SJAG_02848","SJAG_02509","SJAG_00655","SJAG_04003"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113986],"is_not":false,"summary":null,"term":"GO:0048311"},{"annotations":[78170,109048,78026,109263],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048312"},{"annotations":[104590],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000001"}]},"cv_name":"biological_process","definition":"Any process that establishes the spatial arrangement of mitochondria between and within cells.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrion localization","termid":"GO:0051646"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00655":null,"SJAG_01741":null,"SJAG_02509":null,"SJAG_02848":null,"SJAG_04003":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"mitochondrion distribution","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"distribution of mitochondria","type":"exact"},{"name":"mitochondrial distribution","type":"exact"},{"name":"positioning of mitochondria","type":"related"}],"termid":"GO:0048311","terms_by_termid":{"GO:0000001":null,"GO:0048311":null,"GO:0048312":null}}


id: PBO:0076252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptic vesicle glycoprotein 2A","termid":"PBO:0076252"}


id: GO:0072050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the S-shaped body is generated and organized. The S-shaped body is the successor of the comma-shaped body that contributes to the morphogenesis of the nephron.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"nephron morphogenesis","termid":"GO:0072028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"S-shaped body morphogenesis","termid":"GO:0072050"}


id: GO:0097213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the passage or uptake of molecules by the lysosomal membrane.","definition_xrefs":["PMID:20544854","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane permeability","termid":"GO:0090559"},{"relation_name":"is_a","term_name":"lysosomal membrane organization","termid":"GO:0097212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"regulation of lysosomal membrane permeability","synonyms":[{"name":"regulation of lysosome membrane permeability","type":"exact"}],"termid":"GO:0097213"}


