# terms

id: PBO:0090155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L15","termid":"PBO:0090155"}


id: GO:0034339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a ligand-bound hormone receptor acts in the nucleus to modulate the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:mh","GOC:mah","GO_REF:0000021"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter by nuclear hormone receptor (obsolete GO:0034339)","synonyms":[{"name":"regulation of transcription from RNA polymerase II promoter by nuclear hormone receptor","type":"exact"}],"termid":"GO:0034339"}


id: MONDO:0015901
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare inherited hyperlipidemia (obsolete MONDO:0015901)","secondary_identifiers":["ICD9:272.4","Orphanet:181422","ICD10CM:E78.5"],"synonyms":[{"name":"rare hyperlipidemia","type":"related"}],"termid":"MONDO:0015901","xrefs":{"Monarch":{"xref_id":"0015901"}}}


id: PBO:0074142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member B2","termid":"PBO:0074142"}


id: PBO:0036026
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_proline","termid":"PBO:0036026"}


id: MONDO:1012375
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"follicular dysplasia and interface dermatitis, non-human animal","termid":"MONDO:1011750"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"follicular dysplasia and interface dermatitis, dog","secondary_identifiers":["OMIA:001369-9615"],"termid":"MONDO:1012375","xrefs":{"Monarch":{"xref_id":"1012375"}}}


id: MONDO:0030006
data:
  {"annotated_genes":["SJAG_02721"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87292],"is_not":false,"summary":null,"term":"MONDO:0030006"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02721":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"combined oxidative phosphorylation deficiency 40","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1714731","Orphanet:570491","UMLS:C5394232","GARD:18006","DOID:0112117","OMIM:618835"],"synonyms":[{"name":"COMBINED OXIDATIVE PHOSPHORYLATION DEFICIENCY 40","type":"exact"},{"name":"COXPD40","type":"exact"},{"name":"combined oxidative phosphorylation deficiency 40","type":"exact"}],"termid":"MONDO:0030006","terms_by_termid":{"MONDO:0030006":null},"xrefs":{"Monarch":{"xref_id":"0030006"}}}


id: PR:O13703
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vacuolar protein sorting-associated protein VTA1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00899","PANTHER:PTHR12741:SF4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein vts1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13F5.04c","secondary_identifiers":["UniProtKB:O13703"],"synonyms":[{"name":"Spom972h-VTA1","type":"exact"},{"name":"VPS20-associated protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13703"}


id: PBO:0083425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF YAL027W and the verified gene DRS2","termid":"PBO:0083425"}


id: GO:0090049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell migration involved in sprouting angiogenesis. Cell migration involved in sprouting angiogenesis is the orderly movement of endothelial cells into the extracellular matrix in order to form new blood vessels contributing to the process of sprouting angiogenesis.","definition_xrefs":["GOC:BHF","GOC:rl","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of blood vessel endothelial cell migration","termid":"GO:0043535"},{"relation_name":"regulates","term_name":"cell migration involved in sprouting angiogenesis","termid":"GO:0002042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell migration involved in sprouting angiogenesis","termid":"GO:0090049"}


id: PBO:0075094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 143","termid":"PBO:0075094"}


id: PBO:0056291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MANSC domain containing 4","termid":"PBO:0056291"}


id: PBO:0046305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ENAH pseudogene 1","termid":"PBO:0046305"}


id: PBO:0059484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MSRA divergent transcript","termid":"PBO:0059484"}


id: PBO:0046149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elaC ribonuclease Z 2","termid":"PBO:0046149"}


id: FYPO:0001112
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of cell cycle arrest in response to nitrogen starvation occurs in G1 phase, but begins earlier than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell cycle arrest in mitotic G1 phase during nitrogen starvation","termid":"FYPO:0001000"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000631","FYPO:0001320","FYPO:0000298","FYPO:0001985","FYPO:0000257"],"is_obsolete":false,"name":"premature cell cycle arrest in mitotic G1 phase in response to nitrogen starvation","synonyms":[{"name":"advanced cell cycle arrest in mitotic G1 phase during cellular response to nitrogen starvation","type":"exact"},{"name":"advanced cell cycle arrest in mitotic G1 phase in response to nitrogen depletion","type":"exact"},{"name":"advanced cell cycle arrest in mitotic G1 phase in response to nitrogen starvation","type":"exact"},{"name":"premature cell cycle arrest in mitotic G1 phase in response to nitrogen deprivation","type":"exact"},{"name":"premature mitotic G1 arrest in response to nitrogen starvation","type":"exact"},{"name":"premature mitotic cell cycle arrest in G1 phase in response to nitrogen starvation","type":"exact"},{"name":"premature nitrogen deprivation-induced G1 arrest","type":"exact"}],"termid":"FYPO:0001112"}


id: PBO:0089971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smaug family RNA-binding protein Vts1","termid":"PBO:0089971"}


id: GO:0018455
data:
  {"annotated_genes":["SJAG_02010","SJAG_01457","SJAG_00038","SJAG_01414","SJAG_03196","SJAG_03822","SJAG_00237","SJAG_02963","SJAG_00240","SJAG_00242","SJAG_03958","SJAG_03821","SJAG_04660","SJAG_01543","SJAG_01869","SJAG_03370"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72907,79885],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004022"},{"annotations":[108373,79257,94285,108372],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008106"},{"annotations":[76048,93632],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004032"},{"annotations":[97569,103003],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032866"},{"annotations":[116476,116477,100547,100548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120542"},{"annotations":[93635],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047018"},{"annotations":[97570,103004],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032867"},{"annotations":[74358],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003939"},{"annotations":[116257],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050236"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: an alcohol + NAD(P)+ = an aldehyde or ketone + NAD(P)H + H+.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00038":null,"SJAG_00237":null,"SJAG_00240":null,"SJAG_00242":null,"SJAG_01414":null,"SJAG_01457":null,"SJAG_01543":null,"SJAG_01869":null,"SJAG_02010":null,"SJAG_02963":null,"SJAG_03196":null,"SJAG_03370":null,"SJAG_03821":null,"SJAG_03822":null,"SJAG_03958":null,"SJAG_04660":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"alcohol dehydrogenase [NAD(P)+] activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"alcohol:NAD(P)+ oxidoreductase activity","type":"related"},{"name":"aldehyde reductase (NADPH/NADH)","type":"related"}],"termid":"GO:0018455","terms_by_termid":{"GO:0003939":null,"GO:0004022":null,"GO:0004032":null,"GO:0008106":null,"GO:0032866":null,"GO:0032867":null,"GO:0047018":null,"GO:0050236":null,"GO:0120542":null}}


id: GO:0004848
data:
  {"annotated_genes":["SJAG_05287"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[63145],"is_not":false,"summary":null,"term":"GO:0004848"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-ureidoglycolate + H2O + 2 H+ = CO2 + glyoxylate + 2 NH4.","definition_xrefs":["RHEA:19809"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05287":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016810"],"is_obsolete":false,"name":"ureidoglycolate hydrolase activity","references_by_uniquename":{"GO_REF:0000002":null},"secondary_identifiers":["MetaCyc:UREIDOGLYCOLATE-HYDROLASE-RXN","EC:3.5.1.116","KEGG_REACTION:R00469"],"synonyms":[{"name":"ureidoglycolate amidohydrolase activity","type":"exact"}],"termid":"GO:0004848","terms_by_termid":{"GO:0004848":null}}


id: PBO:0072611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal L24 domain containing 1 pseudogene 6","termid":"PBO:0072611"}


id: GO:0006623
data:
  {"annotated_genes":["SJAG_04552","SJAG_00208","SJAG_03970","SJAG_16459","SJAG_03860","SJAG_02371","SJAG_00181","SJAG_03976","SJAG_03250","SJAG_03385","SJAG_04600","SJAG_00204","SJAG_01088","SJAG_01488","SJAG_01527","SJAG_00108","SJAG_01281","SJAG_01981","SJAG_01360","SJAG_01367","SJAG_05210","SJAG_01229","SJAG_00380"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72974,74485,75731,77476,78932,79033,79457,79909,82126,98366],"is_not":false,"summary":null,"term":"GO:0006623"},{"annotations":[116310,70912,93316,107585,115166,64926,69296,89824,64512,93455,89937,65861],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120113"},{"annotations":[92816],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044395"}]},"cv_name":"biological_process","definition":"The process of directing proteins towards the vacuole, usually using signals contained within the protein.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein targeting","termid":"GO:0006605"},{"relation_name":"is_a","term_name":"intracellular protein transport","termid":"GO:0006886"},{"relation_name":"is_a","term_name":"vacuolar transport","termid":"GO:0007034"},{"relation_name":"is_a","term_name":"protein localization to vacuole","termid":"GO:0072665"},{"relation_name":"is_a","term_name":"establishment of protein localization to vacuole","termid":"GO:0072666"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00108":null,"SJAG_00181":null,"SJAG_00204":null,"SJAG_00208":null,"SJAG_00380":null,"SJAG_01088":null,"SJAG_01229":null,"SJAG_01281":null,"SJAG_01360":null,"SJAG_01367":null,"SJAG_01488":null,"SJAG_01527":null,"SJAG_01981":null,"SJAG_02371":null,"SJAG_03250":null,"SJAG_03385":null,"SJAG_03860":null,"SJAG_03970":null,"SJAG_03976":null,"SJAG_04552":null,"SJAG_04600":null,"SJAG_05210":null,"SJAG_16459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0006605"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0006605"],"is_obsolete":false,"name":"protein targeting to vacuole","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"protein vacuolar targeting","type":"exact"},{"name":"protein-vacuolar targeting","type":"exact"},{"name":"protein-vacuole targeting","type":"exact"},{"name":"vacuolar protein sorting","type":"exact"}],"termid":"GO:0006623","terms_by_termid":{"GO:0006623":null,"GO:0044395":null,"GO:0120113":null}}


id: PBO:0028959
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_UDP-galactose_transmembrane_transport","termid":"PBO:0028959"}


id: GO:0140331
data:
  {"annotated_genes":["SJAG_03050","SJAG_00669","SJAG_02516"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[60480,63674,70233],"is_not":false,"summary":null,"term":"GO:0140331"}]},"cv_name":"biological_process","definition":"The movement of an aminophospholipid molecule from one leaflet of a membrane bilayer to the opposite leaflet.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminophospholipid transport","termid":"GO:0015917"},{"relation_name":"is_a","term_name":"phospholipid translocation","termid":"GO:0045332"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00669":null,"SJAG_02516":null,"SJAG_03050":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0061024"],"is_obsolete":false,"name":"aminophospholipid translocation","references_by_uniquename":{"GO_REF:0000108":null},"termid":"GO:0140331","terms_by_termid":{"GO:0140331":null}}


id: PBO:0079342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 26, pseudogene","termid":"PBO:0079342"}


id: PBO:0082950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic nucleoporin required for polyadenylated mRNA export; contains a nuclear export signal; when bound to inositol hexakisphosphate (IP6), functions as an activator for the Dbp5p ATPase activity at the nuclear pore complex during mRNA export; mediates translation initiation; required for efficient translation termination","termid":"PBO:0082950"}


id: MONDO:0001083
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A genetic or acquired disorder characterized by impairment of the function of the proximal tubules of the kidney. It results in decreased reabsorption of electrolytes, glucose, amino acids, and other nutrients.","definition_xrefs":["NCIT:C3034"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"renal tubular transport disease","termid":"MONDO:0006510"},{"relation_name":"is_a","term_name":"renal tubule disorder","termid":"MONDO:0021568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"Fanconi renotubular syndrome","secondary_identifiers":["MEDGEN:4653","GARD:9120","SCTID:40488004","DOID:1062","MESH:D005198","NANDO:2200187","UMLS:C0015624","NANDO:2100027","SCTID:236466005"],"synonyms":[{"name":"De toni-Fanconi syndrome","type":"exact"},{"name":"De toni-debre-Fanconi syndrome","type":"exact"},{"name":"Fanconi syndrome","type":"exact"},{"name":"Fanconi's syndrome","type":"exact"},{"name":"Fanconi-de toni syndrome","type":"exact"},{"name":"Fanconi-de-toni syndrome","type":"exact"},{"name":"Lignac-Fanconi syndrome","type":"exact"},{"name":"adult Fanconi syndrome","type":"narrow"},{"name":"congenital Fanconi syndrome","type":"narrow"},{"name":"deToni Fanconi syndrome","type":"exact"},{"name":"infantile nephropathic cystinosis","type":"related"},{"name":"toni-debre-Fanconi syndrome","type":"related"}],"termid":"MONDO:0001083","xrefs":{"Monarch":{"xref_id":"0001083"}}}


id: GO:0018796
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4,5-dihydroxyphthalate = 3,4-dihydroxybenzoate + CO2.","definition_xrefs":["EC:4.1.1.55"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"4,5-dihydroxyphthalate decarboxylase activity","secondary_identifiers":["RHEA:24184","MetaCyc:45-DIHYDROXYPHTHALATE-DECARBOXYLASE-RXN","UM-BBD_enzymeID:r0149"],"synonyms":[{"name":"4,5-dihydroxyphthalate carboxy-lyase (3,4-dihydroxybenzoate-forming)","type":"related"},{"name":"4,5-dihydroxyphthalate carboxy-lyase activity","type":"related"}],"termid":"GO:0018796"}


id: MONDO:0001791
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial urinary tract infection","termid":"MONDO:0005247"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neonatal urinary tract infectious disease","secondary_identifiers":["ICD9:771.82","MEDGEN:536451","UMLS:C0235815","SCTID:12301009","DOID:1375"],"synonyms":[{"name":"urinary tract infection of newborn","type":"exact"}],"termid":"MONDO:0001791","xrefs":{"Monarch":{"xref_id":"0001791"}}}


id: PR:Q6LA53
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein AAR2 homolog that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01434"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A1 cistron-splicing factor aar2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H5.04","secondary_identifiers":["UniProtKB:Q6LA53"],"synonyms":[{"name":"Spom972h-AAR2","type":"exact"}],"termid":"PR:Q6LA53"}


id: PBO:0072553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RRAD, Ras related glycolysis inhibitor and calcium channel regulator","termid":"PBO:0072553"}


id: PBO:0053670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 851","termid":"PBO:0053670"}


id: MONDO:0014572
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive cerebellar ataxia","termid":"MONDO:0015244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005559"],"is_obsolete":false,"name":"Lichtenstein-Knorr syndrome","secondary_identifiers":["GARD:17780","MEDGEN:898996","OMIM:616291","UMLS:C4225383","Orphanet:448251","DOID:0080065"],"synonyms":[{"name":"LIKNS","type":"related"},{"name":"Lichtenstein-Knorr syndrome","type":"exact"},{"name":"SCAR19","type":"exact"},{"name":"autosomal recessive spinocerebellar ataxia 19","type":"related"},{"name":"autosomal recessive spinocerebellar ataxia type 19","type":"exact"},{"name":"progressive autosomal recessive ataxia-deafness syndrome","type":"related"},{"name":"progressive autosomal recessive ataxia-sensorineural hearing loss syndrome","type":"exact"},{"name":"spinocerebellar ataxia, autosomal recessive 19","type":"related"}],"termid":"MONDO:0014572","xrefs":{"Monarch":{"xref_id":"0014572"}}}


id: PBO:0063425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphodiesterase 4D","termid":"PBO:0063425"}


id: GO:0035844
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the cloaca over time, from it's formation to the mature structure. The cloaca is the common chamber into which intestinal, genital and urinary canals open in vertebrates.","definition_xrefs":["ISBN:0582227089","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"urogenital system development","termid":"GO:0001655"},{"relation_name":"part_of","term_name":"digestive tract morphogenesis","termid":"GO:0048546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cloaca development","synonyms":[{"name":"cloacal development","type":"exact"}],"termid":"GO:0035844"}


id: MONDO:0100574
data:
  {"annotated_genes":["SJAG_03536"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014517"}]},"cv_name":"mondo","definition":"Epilepsy that is characterized by generalized seizure types and may have typical interictal and/or ictal EEG findings that accompany generalized seizure types (for example generalized spike-wave).","direct_ancestors":[{"relation_name":"is_a","term_name":"epilepsy","termid":"MONDO:0005027"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03536":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"generalized epilepsy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C3021","UMLS:C0014548","MEDGEN:4507"],"termid":"MONDO:0100574","terms_by_termid":{"MONDO:0014517":null},"xrefs":{"Monarch":{"xref_id":"0100574"}}}


id: PBO:0078735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Met (anticodon CAT) 7-1","termid":"PBO:0078735"}


id: GO:0036470
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of tyrosine 3-monooxygenase (tyrosine hydroxylase).","definition_xrefs":["GOC:bf","GOC:PARL","PMID:19703902"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0098772","GO:0030234","GO:0003674","GO:0140677"],"is_obsolete":false,"name":"tyrosine 3-monooxygenase activator activity","synonyms":[{"name":"TH activator activity","type":"exact"},{"name":"tyrosine hydroxylase activator activity","type":"exact"}],"termid":"GO:0036470"}


id: GO:0019896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of mitochondria along microtubules in nerve cell axons.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrion transport along microtubule","termid":"GO:0047497"},{"relation_name":"is_a","term_name":"axonal transport","termid":"GO:0098930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"axonal transport of mitochondrion","synonyms":[{"name":"axon transport of mitochondria","type":"exact"}],"termid":"GO:0019896"}


id: MONDO:0100189
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A rare lipoprotein metabolism disorder characterized biochemically by complete absence of apolipoprotein AI and extremely low plasma high density lipoprotein (HDL) cholesterol, and clinically by corneal opacities and xanthomas complicated with premature coronary heart disease (CHD).","definition_xrefs":["Orphanet:425"],"gene_count":0,"genotype_count":0,"name":"obsolete apolipoprotein A-I deficiency (obsolete MONDO:0100189)","secondary_identifiers":["NANDO:2200605"],"synonyms":[{"name":"ApoA-I deficiency","type":"exact"},{"name":"familial apoA-I deficiency","type":"exact"},{"name":"familial hypoalphalipoproteinemia","type":"exact"}],"termid":"MONDO:0100189","xrefs":{"Monarch":{"xref_id":"0100189"}}}


id: GO:0001709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cellular developmental process involved in cell fate commitment that occurs after cell fate specification, in which a cell is irreversibly committed to a cellular developmental fate which is heritable on cell division.","definition_xrefs":["ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular developmental process","termid":"GO:0048869"},{"relation_name":"part_of","term_name":"cell fate commitment","termid":"GO:0045165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell fate determination","secondary_identifiers":["Wikipedia:Cell_fate_determination"],"termid":"GO:0001709"}


id: PBO:0046487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expanded repeat domain, CAG/CTG 1","termid":"PBO:0046487"}


id: PR:O42948
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC16H5.13 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42948"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C16H5.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16H5.13","synonyms":[{"name":"Spom972h-SPBC16H5.13","type":"exact"}],"termid":"PR:O42948"}


id: MONDO:0024661
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An epithelial neoplasm morphologically characterized by the presence of a villous and a tubular architectural pattern. Most often it occurs in the large intestine, small intestine, and the stomach in which the neoplastic epithelial cells show dysplastic features.","definition_xrefs":["NCIT:C4143"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenoma","termid":"MONDO:0004972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulovillous adenoma","secondary_identifiers":["UMLS:C0334307","MEDGEN:83125","ICDO:8263/0"],"synonyms":[{"name":"tubulovillous adenoma","type":"exact"}],"termid":"MONDO:0024661","xrefs":{"Monarch":{"xref_id":"0024661"}}}


id: PBO:0026755
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_transport_gene_mRNA_during_vegetative_growth","termid":"PBO:0026755"}


id: PBO:0085862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; has a CUE domain that binds ubiquitin, which may facilitate intramolecular monoubiquitination; CUE4 has a paralog, CUE1, that arose from the whole genome duplication","termid":"PBO:0085862"}


id: GO:0072722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amitrole stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to amitrole","synonyms":[{"name":"response to 3-amino-1,2,4-triazole","type":"exact"}],"termid":"GO:0072722"}


id: GO:0140281
data:
  {"annotated_genes":["SJAG_04666","SJAG_03631","SJAG_01114","SJAG_03704","SJAG_01188","SJAG_00514","SJAG_04468","SJAG_01805","SJAG_05290","SJAG_03342"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79685,91686,94232,95617,107012,108219,108880,115222,117335,119754],"is_not":false,"summary":null,"term":"GO:0140281"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitotic division septum formation. Division septum formation is the assembly and arrangement of a septum that spans the plasma membrane interface between progeny cells following cytokinesis.","definition_xrefs":["PMID:22786806"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of division septum assembly","termid":"GO:0010973"},{"relation_name":"is_a","term_name":"regulation of mitotic division septum assembly","termid":"GO:0140279"},{"relation_name":"is_a","term_name":"positive regulation of mitotic cytokinetic process","termid":"GO:1903438"},{"relation_name":"positively_regulates","term_name":"mitotic division septum assembly","termid":"GO:0140278"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01114":null,"SJAG_01188":null,"SJAG_01805":null,"SJAG_03342":null,"SJAG_03631":null,"SJAG_03704":null,"SJAG_04468":null,"SJAG_04666":null,"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0000281"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0000281"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0000281","GO:0008150","GO:0007049","GO:0044085"],"is_obsolete":false,"name":"positive regulation of mitotic division septum assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"activation of division septum formation involved in mitotic cell cycle","type":"exact"},{"name":"activation of formation of division septum involved in mitotic cell cycle","type":"exact"},{"name":"activation of mitotic division septum assembly","type":"exact"},{"name":"activation of septin assembly and septum biosynthesis involved in mitotic cell cycle","type":"exact"},{"name":"activation of septin assembly and septum formation involved in mitotic cell cycle","type":"exact"},{"name":"positive regulation of division septum formation involved in mitotic cell cycle","type":"exact"},{"name":"positive regulation of formation of division septum involved in mitotic cell cycle","type":"exact"},{"name":"positive regulation of septin assembly and septum biosynthesis involved in mitotic cell cycle","type":"exact"},{"name":"positive regulation of septin assembly and septum formation involved in mitotic cell cycle","type":"related"},{"name":"up regulation of division septum formation involved in mitotic cell cycle","type":"exact"},{"name":"up regulation of formation of division septum involved in mitotic cell cycle","type":"exact"},{"name":"up regulation of mitotic division septum assembly","type":"exact"},{"name":"up regulation of septin assembly and septum biosynthesis involved in mitotic cell cycle","type":"exact"},{"name":"up regulation of septin assembly and septum formation involved in mitotic cell cycle","type":"exact"},{"name":"up-regulation of division septum formation involved in mitotic cell cycle","type":"exact"},{"name":"up-regulation of formation of division septum involved in mitotic cell cycle","type":"exact"},{"name":"up-regulation of mitotic division septum assembly","type":"exact"},{"name":"up-regulation of septin assembly and septum biosynthesis involved in mitotic cell cycle","type":"exact"},{"name":"up-regulation of septin assembly and septum formation involved in mitotic cell cycle","type":"exact"},{"name":"upregulation of division septum formation involved in mitotic cell cycle","type":"exact"},{"name":"upregulation of formation of division septum involved in mitotic cell cycle","type":"exact"},{"name":"upregulation of septin assembly and septum biosynthesis involved in mitotic cell cycle","type":"exact"},{"name":"upregulation of septin assembly and septum formation involved in mitotic cell cycle","type":"exact"}],"termid":"GO:0140281","terms_by_termid":{"GO:0140281":null}}


id: PBO:0026806
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_meiotic_DNA_double-strand_break_formation","termid":"PBO:0026806"}


id: PBO:0077852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triosephosphate isomerase 1 pseudogene 3","termid":"PBO:0077852"}


id: PBO:0078665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon TTT) 2-1","termid":"PBO:0078665"}


id: GO:0042962
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: H+(out) + acridine(in) = H+(in) + acridine(out).","definition_xrefs":["PMID:10735876"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"acridine:proton antiporter activity","synonyms":[{"name":"acridine efflux pump activity","type":"related"},{"name":"acridine:hydrogen antiporter activity","type":"exact"}],"termid":"GO:0042962"}


id: GO:0050300
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + streptomycin = ADP + 2 H+ + streptomycin 6-phosphate.","definition_xrefs":["RHEA:22268","EC:2.7.1.72"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycoside phosphotransferase activity","termid":"GO:0034071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"aminoglycoside 6-kinase activity","secondary_identifiers":["KEGG_REACTION:R02225","MetaCyc:STREPTOMYCIN-6-KINASE-RXN"],"synonyms":[{"name":"APH(6) activity","type":"related"},{"name":"ATP:streptomycin 6-phosphotransferase activity","type":"narrow"},{"name":"SM 6-kinase activity","type":"narrow"},{"name":"streptidine kinase (phosphorylating)","type":"narrow"},{"name":"streptidine kinase activity","type":"narrow"},{"name":"streptomycin 6-O-phosphotransferase activity","type":"narrow"},{"name":"streptomycin 6-kinase (phosphorylating)","type":"narrow"},{"name":"streptomycin 6-kinase activity","type":"narrow"},{"name":"streptomycin 6-phosphotransferase activity","type":"narrow"}],"termid":"GO:0050300"}


id: PBO:0109050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metabolism induced tumor activator 1","termid":"PBO:0109050"}


id: PBO:0116774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste receptor cell gene 1, pseudogene","termid":"PBO:0116774"}


id: GO:0035237
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the neuropeptide corazonin to initiate a change in cell activity.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor activity","termid":"GO:0008188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"corazonin receptor activity","termid":"GO:0035237"}


id: GO:0004327
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: formaldehyde + glutathione + NAD+ = S-formylglutathione + NADH + H+.","definition_xrefs":["EC:1.2.1.1"],"gene_count":0,"genotype_count":0,"name":"obsolete formaldehyde dehydrogenase (glutathione) activity (obsolete GO:0004327)","synonyms":[{"name":"formaldehyde dehydrogenase (glutathione) activity","type":"exact"}],"termid":"GO:0004327"}


id: PBO:0069203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 457, pseudogene","termid":"PBO:0069203"}


id: GO:0046026
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + precorrin-4 = S-adenosyl-L-homocysteine + precorrin 5.","definition_xrefs":["EC:2.1.1.133"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"precorrin-4 C11-methyltransferase activity","secondary_identifiers":["MetaCyc:2.1.1.133-RXN","RHEA:22012"],"synonyms":[{"name":"CobM","type":"related"},{"name":"S-adenosyl-L-methionine:precorrin-4 C11 methyltransferase activity","type":"related"}],"termid":"GO:0046026"}


id: PBO:0085025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nitric oxide oxidoreductase; flavohemoglobin that plays role in oxidative and nitrosative stress responses; protects against nitration of cellular targets and against cell growth inhibition under aerobic or anaerobic conditions; yeast flavohemoglobin Yhb1p and human homolog neuroglobin NGB protect cells against alpha-synuclein cytotoxicity and aggregate formation; protein increases in abundance, relocalizes from nucleus to cytoplasmic foci upon DNA replication stress","termid":"PBO:0085025"}


id: MONDO:0017693
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete glycogen storage disease due to glycogen synthase deficiency (obsolete MONDO:0017693)","secondary_identifiers":["NANDO:1200824","Orphanet:308520"],"synonyms":[{"name":"GSD due to glycogen synthase deficiency","type":"exact"},{"name":"GSD0","type":"exact"},{"name":"glycogen storage disease type 0","type":"exact"},{"name":"glycogenosis due to glycogen synthase deficiency","type":"exact"}],"termid":"MONDO:0017693","xrefs":{"Monarch":{"xref_id":"0017693"}}}


id: GO:0033666
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which the symbiont activates, maintains or increases its size or mass or its progression from an initial condition to a later condition, within the cells or tissues of the host organism. The host is defined as the larger of the organisms involved in the symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of growth or development of symbiont in host (obsolete GO:0033666)","synonyms":[{"name":"positive regulation of growth or development of symbiont in host","type":"exact"},{"name":"positive regulation of growth or development of symbiont within host","type":"exact"},{"name":"positive regulation of invasive growth","type":"broad"},{"name":"up regulation of growth or development of organism within host","type":"exact"},{"name":"up-regulation of growth or development of organism within host","type":"exact"},{"name":"upregulation of growth or development of organism within host","type":"exact"}],"termid":"GO:0033666"}


id: MONDO:0013021
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autoinflammatory disease caused by mutations in the IL1RN gene, which encodes the IL1 receptor antagonist. It presents in infancy, and is characterized by systemic inflammation, pustular rash, bone pain, sterile osteitis, and periostitis.","definition_xrefs":["NCIT:C119056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic recurrent multifocal osteomyelitis","termid":"MONDO:0009813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"sterile multifocal osteomyelitis with periostitis and pustulosis","secondary_identifiers":["GARD:10516","MEDGEN:411230","OMIM:612852","Orphanet:210115","MESH:C557815","NANDO:2200439","UMLS:C2748507"],"synonyms":[{"name":"DIRA","type":"exact"},{"name":"Interleukin 1 receptor antagonist deficiency","type":"related"},{"name":"Interleukin-1 receptor antagonist deficiency","type":"exact"},{"name":"OMPP","type":"exact"},{"name":"autoinflammatory disease due to interleukin-1 receptor antagonist deficiency","type":"exact"},{"name":"deficiency of interleukin-1 receptor antagonist","type":"related"},{"name":"deficiency of the Interleukin-1 receptor antagonist","type":"exact"},{"name":"osteomyelitis, STERILE multifocal, with periostitis and pustulosis","type":"related"}],"termid":"MONDO:0013021","xrefs":{"Monarch":{"xref_id":"0013021"}}}


id: FYPO:0002774
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of ubiquitinated protein measured in the cell is higher than normal when the cell is in the vegetative growth phase of the life cycle. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"increased level of ubiquitinated protein in cell during vegetative growth","synonyms":[{"name":"increased accumulation of ubiquitinated protein in cell during vegetative growth","type":"related"},{"name":"increased level of ubiquitinated protein in cell during mitotic cell cycle","type":"related"},{"name":"increased ubiquitinated protein level during vegetative growth","type":"exact"}],"termid":"FYPO:0002774"}


id: MONDO:0007566
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Multiple self-healing squamous epithelioma (also known as Ferguson-Smith disease (FSD)) is a rare inherited skin cancer syndrome characterized by the development of multiple locally invasive skin tumors resembling keratoacanthomas of the face and limbs which usually heal spontaneously after several months leaving pitted scars.","definition_xrefs":["Orphanet:65748"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple self-healing squamous epithelioma","secondary_identifiers":["MESH:C536150","NCIT:C4461","OMIM:132800","GARD:3090","UMLS:C0546476","DOID:5585","SCTID:254659009","MEDGEN:154270"],"synonyms":[{"name":"ESS1","type":"related"},{"name":"ESS1 (formerly)","type":"related"},{"name":"ESS1, formerly","type":"related"},{"name":"Ferguson-Smith disease","type":"exact"},{"name":"Ferguson-Smith syndrome","type":"exact"},{"name":"Ferguson-Smith tumor","type":"exact"},{"name":"Ferguson-Smith tumour","type":"exact"},{"name":"Ferguson-Smith type epithelioma","type":"related"},{"name":"Ferguson-Smith-type epithelioma","type":"related"},{"name":"MSSE","type":"exact"},{"name":"familial primary self-healing squamous epithelioma of the skin, Ferguson-Smith type","type":"exact"},{"name":"multiple keratoacanthoma, Ferguson-Smith type","type":"exact"},{"name":"multiple self healing epithelioma of Ferguson-Smith","type":"exact"},{"name":"multiple self healing squamous epithelioma","type":"related"},{"name":"multiple self-healing epithelioma of Ferguson-Smith","type":"exact"},{"name":"multiple self-healing squamous epithelioma","type":"exact"},{"name":"multiple self-healing squamous epithelioma, susceptibility to","type":"related"},{"name":"self-healing squamous epithelioma type 1","type":"exact"}],"termid":"MONDO:0007566","xrefs":{"Monarch":{"xref_id":"0007566"}}}


id: PBO:0072474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 3","termid":"PBO:0072474"}


id: FYPO:0008201
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell enters the meiotic cell cycle normally: i.e after conjugation with cellular fusion and karyogamy with nuclear fusion.","direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal meiotic cell cycle entry","termid":"FYPO:0008201"}


id: PBO:0084587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YCR080W was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, designated YCR081W","termid":"PBO:0084587"}


id: GO:0102046
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3,4-dichlorobenzoate + O2 + a reduced electron acceptor = 3,4-dichlorobenzoate-cis-4,5-diol + an oxidized electron acceptor.","definition_xrefs":["GOC:pz","PMID:9322760"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3,4-dichlorobenzoate-4,5-oxygenase activity","secondary_identifiers":["MetaCyc:RXN-10427"],"termid":"GO:0102046"}


id: PBO:0080268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 31 pseudogene","termid":"PBO:0080268"}


id: PR:Q09867
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- efg1 gene.","definition_xrefs":["UniProtKB:Q09867","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA-processing protein efg1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12G12.02","synonyms":[{"name":"Spom972h-efg1","type":"exact"}],"termid":"PR:Q09867"}


id: MONDO:0007012
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of Creutzfeldt-Jakob disease that is most commonly contracted after consuming meat from an animal suffering from bovine spongiform encephalopathy.","definition_xrefs":["NCIT:C128438"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"prion disease","termid":"MONDO:0005429"},{"relation_name":"is_a","term_name":"acquired Creutzfeldt-Jakob disease","termid":"MONDO:0018686"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variant Creutzfeldt-Jakob disease","secondary_identifiers":["MedDRA:10064199","NCIT:C26802","DOID:5435","SCTID:304603007","ICD10CM:A81.01","icd11.foundation:378572696","Orphanet:576370","UMLS:C0376329","NANDO:1200194","EFO:1001233","ICD9:046.11","MEDGEN:138163","MESH:D016643","GARD:9550"],"synonyms":[{"name":"vCJD","type":"exact"}],"termid":"MONDO:0007012","xrefs":{"Monarch":{"xref_id":"0007012"}}}


id: PR:P79051
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rhp16 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P79051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent helicase rhp16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC330.01c","synonyms":[{"name":"DNA repair protein rhp16 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RAD16 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rhp16","type":"exact"}],"termid":"PR:P79051"}


id: PBO:0068888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 129, pseudogene","termid":"PBO:0068888"}


id: MONDO:0006860
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete mucoepidermoid tumor (obsolete MONDO:0006860)","termid":"MONDO:0006860","xrefs":{"Monarch":{"xref_id":"0006860"}}}


id: PBO:0036211
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-two_Mei2_nuclear_dots_present_in_cell","termid":"PBO:0036211"}


id: PBO:0109516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2879","termid":"PBO:0109516"}


id: PBO:0060275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin heavy chain 9","termid":"PBO:0060275"}


id: MONDO:0005332
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0005332 (obsolete MONDO:0005332)","termid":"MONDO:0005332","xrefs":{"Monarch":{"xref_id":"0005332"}}}


id: SO:0000457
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome duplication involving an insertion from another chromosome.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal_duplication","termid":"SO:1000037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interchromosomal_duplication","synonyms":[{"name":"interchromosomal duplication","type":"exact"}],"termid":"SO:0000457"}


id: MONDO:0016385
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by the association of hypogonadism due to primary gonadal failure, mitral valve prolapse, mild intellectual deficit and short stature.","definition_xrefs":["Orphanet:2233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypogonadism-mitral valve prolapse-intellectual disability syndrome","secondary_identifiers":["GARD:1078","UMLS:C2931685","MESH:C537981","SCTID:721841001","MEDGEN:444117"],"synonyms":[{"name":"Cantalamessa Baldini Ambrosi syndrome","type":"related"},{"name":"Cantalamessa-Baldini-Ambrosi syndrome","type":"exact"},{"name":"primary gonadal failure, short stature, mitral valve prolapse, and intellectual disability","type":"related"},{"name":"primary gonadal failure, short stature, mitral valve prolapse, and mental retardation","type":"related"}],"termid":"MONDO:0016385","xrefs":{"Monarch":{"xref_id":"0016385"}}}


id: PBO:0055976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat kinase 2","termid":"PBO:0055976"}


id: MONDO:1010690
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"AA amyloidosis that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"AA amyloidosis, non-human animal","termid":"MONDO:1010092"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AA amyloidosis, pig","secondary_identifiers":["OMIA:000038-9823"],"termid":"MONDO:1010690","xrefs":{"Monarch":{"xref_id":"1010690"}}}


id: PBO:0013118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U5 snRNP complex subunit Spf38","termid":"PBO:0013118"}


id: GO:0010078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism retains a population of root meristem cells, preventing the commitment of all stem cell progeny to a differentiated cell fate.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of meristem identity","termid":"GO:0010074"},{"relation_name":"part_of","term_name":"root morphogenesis","termid":"GO:0010015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of root meristem identity","termid":"GO:0010078"}


id: PBO:0000467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol 14-demethylase (predicted)","termid":"PBO:0000467"}


id: MOD:00963
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Modification from DeltaMass. OBSOLETE because redundant and identical to MOD:00462. Remap to MOD:00462.","definition_xrefs":["DeltaMass:357"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00963 Oxidation of Trp to kynurenine (obsolete MOD:00963)","termid":"MOD:00963"}


id: PBO:0070245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 186 pseudogene","termid":"PBO:0070245"}


id: MONDO:0976125
data:
  {"annotated_genes":["SJAG_03570"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86847],"is_not":false,"summary":null,"term":"MONDO:0976125"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03570":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with speech or visual impairment and brain hypomyelination","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:621034"],"termid":"MONDO:0976125","terms_by_termid":{"MONDO:0976125":null},"xrefs":{"Monarch":{"xref_id":"0976125"}}}


id: GO:0046509
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,2-diacyl-sn-glycerol + UDP-D-galactose = 1,2-diacyl-3-beta-D-galactosyl-sn-glycerol + H+ + UDP.","definition_xrefs":["EC:2.4.1.46","RHEA:14945"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"1,2-diacylglycerol 3-beta-galactosyltransferase activity","secondary_identifiers":["KEGG_REACTION:R02691","MetaCyc:2.4.1.46-RXN"],"synonyms":[{"name":"1-beta-MGDG activity","type":"related"},{"name":"1beta-MGDG","type":"related"},{"name":"MGDG synthase activity","type":"exact"},{"name":"UDP galactose-1,2-diacylglycerol galactosyltransferase activity","type":"exact"},{"name":"UDP-galactose-diacylglyceride galactosyltransferase activity","type":"exact"},{"name":"UDP-galactose:1,2-diacyl-sn-glycerol 3-beta-D-galactosyltransferase activity","type":"related"},{"name":"UDP-galactose:diacylglycerol galactosyltransferase activity","type":"exact"},{"name":"UDPgalactose:1,2-diacylglycerol 3-beta-D-galactosyltransferase activity","type":"related"},{"name":"monogalactosyldiacylglycerol synthase activity","type":"exact"},{"name":"uridine diphosphogalactose-1,2-diacylglycerol galactosyltransferase activity","type":"exact"}],"termid":"GO:0046509"}


id: PBO:0003631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD8 protease Nep2","termid":"PBO:0003631"}


id: PBO:0073406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET pseudogene 9","termid":"PBO:0073406"}


id: PBO:0091723
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human CDK1","termid":"PBO:0091723"}


id: PBO:0003382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine sulfoxide (predicted)","termid":"PBO:0003382"}


id: MONDO:0012541
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Deafness with labyrinthine aplasia, microtia, and microdontia (LAMM) is a genetic transmission deafness syndrome.","definition_xrefs":["Orphanet:90024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deafness with labyrinthine aplasia, microtia, and microdontia","secondary_identifiers":["SCTID:702360007","OMIM:610706","GARD:10707","ICD9:759.89","MEDGEN:342803","MESH:C565195","UMLS:C1853144"],"synonyms":[{"name":"LAMM syndrome","type":"exact"},{"name":"congenital deafness with inner ear agenesis microtia and microdontia","type":"related"},{"name":"deafness congenital with inner ear agenesis microtia and microdontia","type":"related"},{"name":"deafness with Lamm","type":"related"},{"name":"deafness with labyrinthine aplasia microtia and microdontia (LAMM)","type":"related"},{"name":"deafness with labyrinthine aplasia, microtia, and microdontia","type":"exact"},{"name":"deafness, congenital with inner ear agenesis, microtia, and microdontia","type":"exact"},{"name":"deafness, congenital, with inner EAR agenesis, microtia, and microdontia","type":"related"},{"name":"deafness, congenital, with labyrinthine aplasia, microtia, and microdontia","type":"related"},{"name":"microdontia-type I microtia-deafness syndrome","type":"exact"}],"termid":"MONDO:0012541","xrefs":{"Monarch":{"xref_id":"0012541"}}}


id: PBO:0051452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 5-45","termid":"PBO:0051452"}


id: MONDO:0018450
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spinal muscular atrophy with respiratory distress type 2 is a rare, genetic, motor neuron disease characterized by progressive early respiratory failure associated with diaphragm paralysis, distal muscular weakness, joint contractures, and axial hypotonia with preserved antigravity limb movements. Phenotype overlaps considerably with SMARD type 1 but is differentiated by a mutation in a different gene.","definition_xrefs":["Orphanet:404521"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spinal muscular atrophy","termid":"MONDO:0001516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"spinal muscular atrophy with respiratory distress type 2","secondary_identifiers":["MEDGEN:1658540","UMLS:C4749434","GARD:21723"],"synonyms":[{"name":"SMARD2","type":"exact"},{"name":"X-linked spinal muscular atrophy with respiratory distress","type":"exact"},{"name":"diaphragmatic spinal muscular atrophy type 2","type":"exact"},{"name":"severe infantile axonal neuropathy with respiratory failure type 2","type":"exact"}],"termid":"MONDO:0018450","xrefs":{"Monarch":{"xref_id":"0018450"}}}


id: PBO:0064629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisome proliferator activated receptor alpha","termid":"PBO:0064629"}


id: PBO:0039397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANAPC1 pseudogene 2","termid":"PBO:0039397"}


id: PBO:0071577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35 pseudogene 6","termid":"PBO:0071577"}


id: PBO:0005337
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial disorders","termid":"PBO:0005337"}


id: GO:1903222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which quinolinic acid is transported across a membrane.","definition_xrefs":["PMID:23457190","GO_REF:0000069","GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transport","termid":"GO:0006835"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"quinolinic acid transmembrane transport","termid":"GO:1903222"}


id: GO:0099007
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of the presynaptic endosome membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:mf","GOC:autophagy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of endosome membrane","termid":"GO:0031313"},{"relation_name":"part_of","term_name":"presynaptic endosome membrane","termid":"GO:0098954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575","GO:0005768"],"is_obsolete":false,"name":"extrinsic component of presynaptic endosome membrane","termid":"GO:0099007"}


id: MONDO:1011861
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tremor, non-human animal","secondary_identifiers":["OMIA:001016"],"termid":"MONDO:1011861","xrefs":{"Monarch":{"xref_id":"1011861"}}}


id: GO:0016606
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A nuclear body that is enriched in the lymphoid cell-specific protein LYSp100B; LANDs are globular, electron-dense structures and are morphologically distinct from the annular structures characteristic of PML bodies.","definition_xrefs":["PMID:8695863","PMID:10921892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear body","termid":"GO:0016604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005654"}],"interesting_parent_ids":["GO:0005575","GO:0005654","GO:0005634"],"is_obsolete":false,"name":"LYSP100-associated nuclear domain","synonyms":[{"name":"LANDs","type":"exact"}],"termid":"GO:0016606"}


id: GO:1905912
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of calcium ion export across the plasma membrane.","definition_xrefs":["GOC:BHF","GOC:rph","GOC:TermGenie","GOC:BHF_miRNA","GO_REF:0000058","PMID:22362515"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of calcium ion transmembrane transport","termid":"GO:1903169"},{"relation_name":"regulates","term_name":"calcium ion export across plasma membrane","termid":"GO:1990034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"regulation of calcium ion export across plasma membrane","synonyms":[{"name":"regulation of calcium ion efflux from cell","type":"exact"},{"name":"regulation of calcium ion export from cell","type":"exact"}],"termid":"GO:1905912"}


id: GO:0018028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The myristoylation of peptidyl-lysine to form peptidyl-N6-myristoyl-L-lysine.","definition_xrefs":["RESID:AA0078"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-lysine myristoylation (obsolete GO:0018028)","synonyms":[{"name":"peptidyl-lysine myristylation","type":"exact"}],"termid":"GO:0018028"}


id: PBO:0005265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Urb1 (predicted)","termid":"PBO:0005265"}


id: MONDO:0021179
data:
  {"annotated_genes":["SJAG_02274","SJAG_01236","SJAG_04300"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89032],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0971004"},{"annotations":[86990],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010080"},{"annotations":[87910],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014889"}]},"cv_name":"mondo","definition":"Disorders caused by imbalances in the protein homeostasis network - synthesis, folding, and transport of proteins; post-translational modifications; and degradation or clearance of misfolded proteins.","definition_xrefs":["MESH:D057165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease","termid":"MONDO:0005066"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01236":null,"SJAG_02274":null,"SJAG_04300":null},"genotype_count":0,"in_subsets":["pombe_mondo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"proteostasis deficiencies","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:403490","UMLS:C2718000"],"synonyms":[{"name":"Misfolding disease, Protein","type":"narrow"},{"name":"Misfolding diseases, Protein","type":"narrow"},{"name":"Misfolding disorder, Protein","type":"narrow"},{"name":"Misfolding disorders, Protein","type":"narrow"},{"name":"Protein Misfolding disease","type":"narrow"},{"name":"Protein Misfolding diseases","type":"narrow"},{"name":"Protein Misfolding disorder","type":"narrow"},{"name":"Protein Misfolding disorders","type":"narrow"},{"name":"Protein folding disease","type":"narrow"},{"name":"Protein folding diseases","type":"narrow"},{"name":"Protein folding disorder","type":"narrow"},{"name":"Protein folding disorders","type":"narrow"},{"name":"Proteostasis deficiency","type":"exact"},{"name":"Proteostasis dysfunction","type":"exact"},{"name":"Proteostasis dysfunctions","type":"exact"},{"name":"deficiencies, Proteostasis","type":"exact"},{"name":"deficiency, Proteostasis","type":"exact"},{"name":"disease, Protein Misfolding","type":"narrow"},{"name":"disease, Protein folding","type":"narrow"},{"name":"diseases, Protein Misfolding","type":"narrow"},{"name":"diseases, Protein folding","type":"narrow"},{"name":"disorder, Protein Misfolding","type":"narrow"},{"name":"disorder, Protein folding","type":"narrow"},{"name":"disorders, Protein Misfolding","type":"narrow"},{"name":"disorders, Protein folding","type":"narrow"},{"name":"dysfunction, Proteostasis","type":"exact"},{"name":"dysfunctions, Proteostasis","type":"exact"},{"name":"folding disease, Protein","type":"narrow"},{"name":"folding diseases, Protein","type":"narrow"},{"name":"folding disorder, Protein","type":"narrow"},{"name":"folding disorders, Protein","type":"narrow"},{"name":"proteinopathy","type":"related"},{"name":"proteopathic disease","type":"related"},{"name":"proteopathy","type":"related"}],"termid":"MONDO:0021179","terms_by_termid":{"MONDO:0010080":null,"MONDO:0014889":null,"MONDO:0971004":null},"xrefs":{"Monarch":{"xref_id":"0021179"}}}


id: PBO:0073491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingosine-1-phosphate lyase 1","termid":"PBO:0073491"}


id: MONDO:0004667
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare malignant neoplasm that arises from the sublingual gland. The majority are carcinomas.","definition_xrefs":["NCIT:C3527"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sublingual gland neoplasm","termid":"MONDO:0021242"},{"relation_name":"is_a","term_name":"major salivary gland cancer","termid":"MONDO:0044743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"sublingual gland cancer","secondary_identifiers":["ICD10CM:C08.1","MEDGEN:102263","DOID:8849","SCTID:363381003","UMLS:C0153361","ICD9:142.2"],"synonyms":[{"name":"cancer of sublingual gland","type":"exact"},{"name":"malignant neoplasm of sublingual gland","type":"exact"},{"name":"malignant neoplasm of the sublingual gland","type":"exact"},{"name":"malignant sublingual gland neoplasm","type":"exact"},{"name":"malignant sublingual gland tumor","type":"exact"},{"name":"malignant sublingual gland tumour","type":"exact"},{"name":"malignant tumor of sublingual gland","type":"exact"},{"name":"malignant tumor of the sublingual gland","type":"exact"},{"name":"malignant tumour of sublingual gland","type":"exact"},{"name":"malignant tumour of the sublingual gland","type":"exact"},{"name":"sublingual gland cancer","type":"exact"}],"termid":"MONDO:0004667","xrefs":{"Monarch":{"xref_id":"0004667"}}}


id: GO:0010347
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-galactose-1-phosphate + H2O = L-galactose + phosphate.","definition_xrefs":["PMID:16595667","PMID:15550539"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactose-1-phosphate phosphatase activity","termid":"GO:0070456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"L-galactose-1-phosphate phosphatase activity","secondary_identifiers":["MetaCyc:RXNQT-4142","RHEA:26349"],"termid":"GO:0010347"}


id: GO:0003073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that modulates the force with which blood travels through the systemic arterial circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of blood pressure","termid":"GO:0008217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure","termid":"GO:0003073"}


id: MONDO:0001322
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the pericardium.","direct_ancestors":[{"relation_name":"is_a","term_name":"heart cancer","termid":"MONDO:0001340"},{"relation_name":"is_a","term_name":"neoplasm of pericardium","termid":"MONDO:0021381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0004992"],"is_obsolete":false,"name":"pericardium cancer","secondary_identifiers":["NCIT:C4567","MEDGEN:87561","DOID:116","UMLS:C0346609"],"synonyms":[{"name":"cancer of pericardium","type":"exact"},{"name":"malignant neoplasm of pericardium","type":"exact"},{"name":"malignant neoplasm of the pericardium","type":"exact"},{"name":"malignant pericardial neoplasm","type":"exact"},{"name":"malignant pericardial tumor","type":"exact"},{"name":"malignant pericardial tumour","type":"exact"},{"name":"malignant pericardium neoplasm","type":"exact"},{"name":"malignant tumor of pericardium","type":"exact"},{"name":"malignant tumor of the pericardium","type":"exact"},{"name":"malignant tumour of pericardium","type":"exact"},{"name":"malignant tumour of the pericardium","type":"exact"},{"name":"pericardial tumor","type":"broad"},{"name":"pericardial tumour","type":"broad"},{"name":"pericardium cancer","type":"exact"}],"termid":"MONDO:0001322","xrefs":{"Monarch":{"xref_id":"0001322"}}}


id: MONDO:0012773
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hunter-Macdonald syndrome","secondary_identifiers":["MEDGEN:383181","OMIM:611962","UMLS:C2677745","MESH:C567445"],"synonyms":[{"name":"Hunter-Macdonald syndrome","type":"exact"}],"termid":"MONDO:0012773","xrefs":{"Monarch":{"xref_id":"0012773"}}}


id: PBO:0059841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosome associated GTPase 1","termid":"PBO:0059841"}


id: MONDO:0015204
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microlissencephaly describes a heterogenous group of a rare cortical malformations characterized by lissencephaly in combination with severe congenital microcephaly, presenting with spasticity, severe developmental delay, and seizures and with survival varying from days to years.","definition_xrefs":["Orphanet:1083"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lissencephaly spectrum disorders","termid":"MONDO:0018838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"microlissencephaly","secondary_identifiers":["GARD:16555","UMLS:C1956147","DOID:0112234","icd11.foundation:169315445","MEDGEN:365439"],"termid":"MONDO:0015204","xrefs":{"Monarch":{"xref_id":"0015204"}}}


id: PBO:0070936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 44","termid":"PBO:0070936"}


id: PBO:0071872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 10","termid":"PBO:0071872"}


id: GO:0036519
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a serotonergic neuron growth cone is directed to a specific target site in response to a repulsive chemical cue.","definition_xrefs":["GOC:PARL","PMID:21106844","CL:0000850","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemorepulsion of axon","termid":"GO:0061643"},{"relation_name":"part_of","term_name":"serotonergic neuron axon guidance","termid":"GO:0036515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemorepulsion of serotonergic neuron axon","synonyms":[{"name":"chemorepulsion of 5-HT axon","type":"exact"},{"name":"chemorepulsion of serotonergic axon","type":"related"}],"termid":"GO:0036519"}


id: PBO:0035750
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_secondary_cell_septum_thickness","termid":"PBO:0035750"}


id: PBO:0039945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AT-rich interaction domain 4B","termid":"PBO:0039945"}


id: PBO:0080526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WAS protein family homolog 8, pseudogene","termid":"PBO:0080526"}


id: PBO:0042251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper chaperone for superoxide dismutase","termid":"PBO:0042251"}


id: GO:0060856
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Establishment of the barrier between the blood and the brain. The cells in the brain are packed tightly together preventing the passage of most molecules from the blood into the brain. Only lipid soluble molecules or those that are actively transported can pass through the blood-brain barrier.","definition_xrefs":["GOC:dph","PMID:30280653","GOC:aruk","PMID:20080302","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"central nervous system development","termid":"GO:0007417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of blood-brain barrier","synonyms":[{"name":"establishment of BBB","type":"exact"},{"name":"establishment of blood/brain barrier","type":"exact"}],"termid":"GO:0060856"}


id: PBO:0068416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease/angiogenin inhibitor 1","termid":"PBO:0068416"}


id: PBO:0085389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane localized uracil permease; expression is tightly regulated by uracil levels and environmental cues; conformational alterations induced by unfolding or substrate binding result in Rsp5p-mediated ubiquitination and degradation","termid":"PBO:0085389"}


id: MONDO:0015041
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A myelodysplastic syndrome defined by 10-19% blasts in the bone marrow or 5-19% blasts in the blood and <10% blasts in the bone marrow. Approximately 33% of cases progress to acute leukemia. The prognosis is usually poor. (WHO)","definition_xrefs":["NCIT:C7168"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myelodysplastic syndrome with excess blasts","termid":"MONDO:0019454"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"myelodysplastic syndrome with excess blasts-2","secondary_identifiers":["Orphanet:100020","GARD:19738"],"synonyms":[{"name":"MDS-EB-2","type":"exact"},{"name":"RAEB-2","type":"exact"},{"name":"RAEB-II","type":"exact"},{"name":"myelodysplastic syndrome with Excess blasts-2","type":"exact"},{"name":"refractory anaemia with excess blasts type 2","type":"related"},{"name":"refractory anemia with excess blasts type 2","type":"related"}],"termid":"MONDO:0015041","xrefs":{"Monarch":{"xref_id":"0015041"}}}


id: PBO:0075952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal transducing adaptor molecule","termid":"PBO:0075952"}


id: GO:0005883
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A type of intermediate filament found in the core of neuronal axons. Neurofilaments are heteropolymers composed of three type IV polypeptides: NF-L, NF-M, and NF-H (for low, middle, and high molecular weight). Neurofilaments are responsible for the radial growth of an axon and determine axonal diameter.","definition_xrefs":["ISBN:0716731363","ISBN:0815316194","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intermediate filament","termid":"GO:0005882"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"neurofilament","secondary_identifiers":["Wikipedia:Neurofilament","NIF_Subcellular:sao1316272517"],"synonyms":[{"name":"type IV intermediate filament","type":"exact"}],"termid":"GO:0005883"}


id: PBO:0083446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene ATP14","termid":"PBO:0083446"}


id: PBO:0049086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 141B, pseudogene","termid":"PBO:0049086"}


id: FYPO:0007626
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein oxidation is normal (i.e. indistinguishable from wild type) during a cellular response to hydrogen peroxide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein oxidation during vegetative growth","termid":"FYPO:0002013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal protein oxidation during cellular response to hydrogen peroxide","synonyms":[{"name":"normal protein oxidation during cellular response to H2O2","type":"exact"},{"name":"normal protein oxidation during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"normal protein oxidation during cellular response to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"normal protein/peptide oxidation during cellular response to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0007626"}


id: PBO:0034529
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_onset_of_premeiotic_DNA_replication","termid":"PBO:0034529"}


id: MONDO:0007315
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cherubism is a rare, self-limiting, fibro-osseous, genetic disease of childhood and adolescence characterized by varying degrees of progressive bilateral enlargement of the mandible and/or maxilla, with clinical repercussions in severe cases.","definition_xrefs":["Orphanet:184"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with disorganized development of skeletal components (obsolete MONDO:0019708)","termid":"MONDO:0019708"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"},{"relation_name":"is_a","term_name":"autoinflammatory syndrome","termid":"MONDO:0019751"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"cherubism","secondary_identifiers":["GARD:6036","NCIT:C84630","icd11.foundation:1729261719","DOID:1856","MEDGEN:40219","OMIM:118400","ICD9:526.89","MedDRA:10070535","NANDO:2200444","MESH:D002636","UMLS:C0008029","SCTID:76098004"],"synonyms":[{"name":"CRBM","type":"exact"},{"name":"Crbm","type":"related"},{"name":"cherubism","type":"exact"},{"name":"familial fibrous dysplasia of the jaws","type":"exact"},{"name":"familial multilocular cystic disease of the jaws","type":"exact"}],"termid":"MONDO:0007315","xrefs":{"Monarch":{"xref_id":"0007315"}}}


id: GO:0047070
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O2 + 3-(2,3-dihydroxyphenyl)propanoate = 2-hydroxy-6-oxonona-2,4-diene-1,9-dioate.","definition_xrefs":["MetaCyc:1.13.11.16-RXN","EC:1.13.11.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"3-carboxyethylcatechol 2,3-dioxygenase activity","secondary_identifiers":["RHEA:23840","GO:0008669"],"synonyms":[{"name":"2,3-dihydroxy-beta-phenylpropionate oxygenase activity","type":"related"},{"name":"2,3-dihydroxy-beta-phenylpropionic dioxygenase activity","type":"related"},{"name":"3-(2,3-dihydroxyphenyl)propanoate:oxygen 1,2-oxidoreductase (decyclizing)","type":"related"},{"name":"3-(2,3-dihydroxyphenyl)propanoate:oxygen 1,2-oxidoreductase activity","type":"related"}],"termid":"GO:0047070"}


id: PBO:0055197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2622","termid":"PBO:0055197"}


id: PBO:0056048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LTV1 ribosome biogenesis factor pseudogene 1","termid":"PBO:0056048"}


id: GO:0001654
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the eye over time, from its formation to the mature structure. The eye is the organ of sight.","definition_xrefs":["GOC:jl","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory organ development","termid":"GO:0007423"},{"relation_name":"part_of","term_name":"visual system development","termid":"GO:0150063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eye development","secondary_identifiers":["Wikipedia:Eye_development","GO:0042460"],"termid":"GO:0001654"}


id: GO:0002486
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses a peptide antigen of endogenous origin on its cell surface in association with an MHC class I protein complex following intracellular transport via a TAP-independent ER pathway. The peptide is typically a fragment of a larger endogenous protein which has been degraded within the cell and becomes associated with the MHC class I molecule in the ER following transport from the cytosol via a TAP-independent pathway. Class I here refers to classical class I molecules.","definition_xrefs":["PMID:14647477","GOC:add","PMID:15771591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway","termid":"GO:0002484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-independent","synonyms":[{"name":"TAP-independent antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway","type":"exact"},{"name":"TAP-independent endogenous peptide antigen processing and presentation via MHC class I via ER pathway","type":"exact"},{"name":"endogenous peptide antigen processing and presentation via MHC class I via ER pathway, TAP-independent","type":"exact"}],"termid":"GO:0002486"}


id: MOD:00468
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label","definition_xrefs":["Unimod:90"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESP-Tag light d0","synonyms":[{"name":"ESP","type":"related"},{"name":"ESP-Tag light d0","type":"related"}],"termid":"MOD:00468"}


id: MONDO:0011265
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tooth agenesis","termid":"MONDO:0005486"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tooth agenesis, selective, 2","secondary_identifiers":["OMIM:602639","MESH:C566513","UMLS:C1865092","MEDGEN:400679"],"synonyms":[{"name":"STHAG2","type":"exact"},{"name":"hypodontia/oligodontia 2","type":"related"},{"name":"tooth agenesis, selective, 2","type":"exact"}],"termid":"MONDO:0011265","xrefs":{"Monarch":{"xref_id":"0011265"}}}


id: PBO:0000714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endo-1,3-beta-glucanase Eng1","termid":"PBO:0000714"}


id: MONDO:0015605
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal monosomy 9p is a rare chromosomal anomaly syndrome, resulting from a partial deletion of the short arm of chromosome 9, with a highly variable phenotype typically characterized by intellectual disability, craniofacial dysmorphism (trigonocephaly, upslanting palpebral fissures, hypoplastic supraorbital ridges), abnormal digits (long middle phalanges with short distal phalanges), as well as frequent association with genitourinary abnormalities (cryptorchidism, hypospadias, ambiguous genitalia, 46,XY testicular dysgenesis). Congenital hypothyroidism and cardiovascular defects have been reported in some cases. Patients present an increased risk for gonadoblastoma.","definition_xrefs":["Orphanet:1642"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 9p deletion syndrome","termid":"MONDO:0008013"},{"relation_name":"is_a","term_name":"46,XY disorder of sex development","termid":"MONDO:0020040"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal monosomy 9p","secondary_identifiers":["MEDGEN:539240","UMLS:C0265425","MESH:C538025","GARD:18732","SCTID:763530000"],"synonyms":[{"name":"distal deletion 9p","type":"exact"},{"name":"distal monosomy type 9p","type":"exact"},{"name":"monosomy 9pter","type":"exact"},{"name":"telomeric deletion 9p","type":"exact"}],"termid":"MONDO:0015605","xrefs":{"Monarch":{"xref_id":"0015605"}}}


id: PBO:0070676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 47","termid":"PBO:0070676"}


id: MONDO:0022672
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndromic cataract that has autosomal dominant inheritance.","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"cataract","termid":"MONDO:0005129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005328"],"is_obsolete":false,"name":"autosomal dominant cataract","synonyms":[{"name":"cataract congenital autosomal dominant","type":"related"}],"termid":"MONDO:0022672","xrefs":{"Monarch":{"xref_id":"0022672"}}}


id: MONDO:0043247
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by upper gastrointestinal tract bleeding caused by longitudinal mucosal tears in the gastroesophageal junction. The tears result from retching or forceful coughing. It was initially described in alcoholics.","definition_xrefs":["NCIT:C84881"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hemorrhagic disease","termid":"MONDO:0002243"},{"relation_name":"excluded_subClassOf","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mallory-Weiss syndrome","secondary_identifiers":["SCTID:35265002","ICD10CM:K22.6","MESH:D008309","UMLS:C0024633","MEDGEN:44265"],"synonyms":[{"name":"Lacerations-gastroesophageal junction, mucosal","type":"related"},{"name":"Lacerations-gastroesophageal junctions, mucosal","type":"related"},{"name":"Mallory Weiss laceration","type":"related"},{"name":"Mallory Weiss syndrome","type":"related"},{"name":"Mallory Weiss tear","type":"related"},{"name":"Mallory-Weiss laceration","type":"related"},{"name":"Mallory-Weiss syndrome","type":"exact"},{"name":"Mallory-Weiss tear","type":"related"},{"name":"gastro-esophageal laceration-hemorrhage syndrome","type":"related"},{"name":"gastroesophageal laceration haemorrhage","type":"related"},{"name":"gastroesophageal laceration hemorrhage","type":"related"},{"name":"gastroesophageal laceration-hemorrhage","type":"related"},{"name":"gastroesophageal laceration-hemorrhage syndrome","type":"related"},{"name":"gastroesophageal laceration-hemorrhages","type":"related"},{"name":"junction, mucosal Lacerations-gastroesophageal","type":"related"},{"name":"junctions, mucosal Lacerations-gastroesophageal","type":"related"},{"name":"laceration, Mallory-Weiss","type":"related"},{"name":"laceration-hemorrhage, gastroesophageal","type":"related"},{"name":"laceration-hemorrhages, gastroesophageal","type":"related"},{"name":"mucosal Lacerations gastroesophageal junction","type":"related"},{"name":"mucosal Lacerations-gastroesophageal junction","type":"related"},{"name":"mucosal Lacerations-gastroesophageal junctions","type":"related"},{"name":"mucosal lacerations - gastroesophageal junction","type":"related"},{"name":"syndrome, Mallory-Weiss","type":"related"}],"termid":"MONDO:0043247","xrefs":{"Monarch":{"xref_id":"0043247"}}}


id: PBO:0090717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S20","termid":"PBO:0090717"}


id: MONDO:0100286
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bronciolitis caused by infection with respiratory syncytial virus.","definition_xrefs":["MONDO:patterns/infectious_disease_by_agent","PMID:28722988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory syncytial virus infectious disease","termid":"MONDO:0001577"},{"relation_name":"is_a","term_name":"bronchiolitis","termid":"MONDO:0002465"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"respiratory syncytial virus bronchiolitis","secondary_identifiers":["MEDGEN:547277","UMLS:C0276340"],"synonyms":[{"name":"RSV bronchiolitis","type":"exact"}],"termid":"MONDO:0100286","xrefs":{"Monarch":{"xref_id":"0100286"}}}


id: PBO:0066746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 44","termid":"PBO:0066746"}


id: PATO:0001980
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having distinct parts arising from a common point or center.","definition_xrefs":["thefreedictionary:thefreedictionary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"digitate","termid":"PATO:0001980"}


id: GO:1990201
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex capable of alkanesulfonate monooxygenase activity. Involved in the utilization of alkanesulfonates as sulfur sources under conditions of sulfate or cysteine starvation, catalyzing the conversion of alkanesulfonates into aldehydes and sulfite. In E.coli the complex consists of a SsuD tetramer.","definition_xrefs":["PMID:10480865","PMID:16997955","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005829"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737","GO:0005829"],"is_obsolete":false,"name":"alkanesulfonate monooxygenase complex","synonyms":[{"name":"SsuD complex","type":"narrow"}],"termid":"GO:1990201"}


id: MONDO:1011182
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteopetrosis that occurs in rabbit.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteopetrosis, non-human animal","termid":"MONDO:1010300"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteopetrosis, rabbit","secondary_identifiers":["OMIA:000755-9986"],"termid":"MONDO:1011182","xrefs":{"Monarch":{"xref_id":"1011182"}}}


id: PBO:0051616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin like domain containing receptor 1","termid":"PBO:0051616"}


id: FYPO:0007788
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of macroautophagy is increased.","definition_xrefs":["PMID:17121544","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased macroautophagy","termid":"FYPO:0000384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased macroautophagy during vegetative growth","synonyms":[{"name":"increased macroautophagy during mitotic cell cycle","type":"related"}],"termid":"FYPO:0007788"}


id: GO:0072685
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an Mre11 complex, a trimeric protein complex that possesses endonuclease activity and is involved in meiotic recombination, DNA repair and checkpoint signaling.","definition_xrefs":["GOC:mah","PMID:19211838"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"Mre11 complex assembly","synonyms":[{"name":"MRN complex assembly","type":"exact"},{"name":"MRX complex assembly","type":"exact"},{"name":"RAD50-MRE11-NBN complex assembly","type":"exact"},{"name":"RMX complex assembly","type":"exact"},{"name":"Rad50 complex assembly","type":"exact"},{"name":"Rad50-Rad32-Nbs1 complex assembly","type":"exact"}],"termid":"GO:0072685"}


id: GO:0030410
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3 S-adenosyl-L-methionine(1+) = 3 S-methyl-5'-thioadenosine + 3 H+ + nicotianamine.","definition_xrefs":["RHEA:16481","EC:2.5.1.43"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016765"],"is_obsolete":false,"name":"nicotianamine synthase activity","secondary_identifiers":["MetaCyc:2.5.1.43-RXN","KEGG_REACTION:R00075"],"synonyms":[{"name":"S-adenosyl-L-methionine:S-adenosyl-L-methionine:S-adenosyl-L-methionine 3-amino-3-carboxypropyltransferase activity","type":"related"}],"termid":"GO:0030410"}


id: PBO:0070074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 31, pseudogene","termid":"PBO:0070074"}


id: FYPO:0007006
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the frequency of DNA recombination downstream of replication fork barriers is increased.","definition_xrefs":["PomBase:mah","PMID:30667359"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA recombination during vegetative growth","termid":"FYPO:0001345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased DNA recombination downstream of mitotic DNA replication fork barriers","synonyms":[{"name":"increased DNA recombination downstream of mitotic DNA replication fork barriers during mitotic cell cycle","type":"related"},{"name":"increased DNA recombination downstream of mitotic DNA replication fork barriers during vegetative growth","type":"exact"},{"name":"increased recombination downstream of mitotic DNA replication fork barriers","type":"exact"},{"name":"increased template switching recombination downstream of mitotic DNA replication fork barriers","type":"exact"}],"termid":"FYPO:0007006"}


id: PBO:0068704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 85, pseudogene","termid":"PBO:0068704"}


id: MONDO:0957560
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hearing loss, noise-induced, susceptibility to","secondary_identifiers":["UMLS:C2751629","OMIM:613035","MEDGEN:414426"],"termid":"MONDO:0957560","xrefs":{"Monarch":{"xref_id":"0957560"}}}


id: PBO:0080074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP37 pseudogene 1","termid":"PBO:0080074"}


id: MONDO:0006114
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete bladder squamous cell carcinoma (obsolete MONDO:0006114)","termid":"MONDO:0006114","xrefs":{"Monarch":{"xref_id":"0006114"}}}


id: PBO:0090950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Utp7","termid":"PBO:0090950"}


id: MONDO:0019370
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"female reproductive system disorder","termid":"MONDO:0002263"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vulvovaginal gingival syndrome","secondary_identifiers":["UMLS:C3873472","GARD:19037","MEDGEN:848586","icd11.foundation:997964040","SCTID:707250009","Orphanet:83453"],"termid":"MONDO:0019370","xrefs":{"Monarch":{"xref_id":"0019370"}}}


id: GO:0042766
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The movement of nucleosomes along a DNA fragment.","definition_xrefs":["PMID:12006495"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleosome mobilization (obsolete GO:0042766)","synonyms":[{"name":"nucleosome sliding","type":"exact"}],"termid":"GO:0042766"}


id: GO:0015252
data:
  {"annotated_genes":["SJAG_07003","SJAG_00985","SJAG_03925","SJAG_MIT15","SJAG_00438","SJAG_MIT37","SJAG_00836","SJAG_04122","SJAG_00133","SJAG_00542","SJAG_02564","SJAG_03114","SJAG_02598","SJAG_MIT09","SJAG_05204","SJAG_02105","SJAG_00915"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79880,58106,74478,71919,109649,109741,81066,95095,95684,120947,71627,96664,120960,79560,77559,103640,120953],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046933"}]},"cv_name":"molecular_function","definition":"Enables the facilitated diffusion of a hydrogen ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism.","definition_xrefs":["GOC:mtg_transport","GOC:pr","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic cation channel activity","termid":"GO:0005261"},{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00133":null,"SJAG_00438":null,"SJAG_00542":null,"SJAG_00836":null,"SJAG_00915":null,"SJAG_00985":null,"SJAG_02105":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_03114":null,"SJAG_03925":null,"SJAG_04122":null,"SJAG_05204":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"proton channel activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9729542"],"synonyms":[{"name":"hydrogen ion channel activity","type":"exact"}],"termid":"GO:0015252","terms_by_termid":{"GO:0046933":null}}


id: PBO:0047806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box L1","termid":"PBO:0047806"}


id: PBO:0055944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRRC52 antisense RNA 1","termid":"PBO:0055944"}


id: FYPO:0005255
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a carboxypeptidase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal peptidase activity","termid":"FYPO:0000666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000652","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"abnormal carboxypeptidase activity","termid":"FYPO:0005255"}


id: PBO:0078988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA suppressor (TTA) 1-1","termid":"PBO:0078988"}


id: PBO:0040410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V1 subunit H","termid":"PBO:0040410"}


id: MONDO:0022613
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bruyn scheltens syndrome","termid":"MONDO:0022613","xrefs":{"Monarch":{"xref_id":"0022613"}}}


id: MONDO:0008763
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A multisystemic disorder characterized by cone-rod dystrophy, hearing loss, obesity, insulin resistance and hyperinsulinemia, type 2 diabetes mellitus, dilated cardiomyopathy (DCM), and progressive hepatic and renal dysfunction.","definition_xrefs":["Orphanet:64"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"diabetes mellitus","termid":"MONDO:0005015"},{"relation_name":"excluded_subClassOf","term_name":"kidney disorder","termid":"MONDO:0005240"},{"relation_name":"excluded_subClassOf","term_name":"inherited renal tubular disease","termid":"MONDO:0015962"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome associated with dilated cardiomyopathy (obsolete MONDO:0016337)","termid":"MONDO:0016337"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic retinitis pigmentosa (obsolete MONDO:0020240)","termid":"MONDO:0020240"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"ciliopathy","termid":"MONDO:0005308"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Alstrom syndrome","secondary_identifiers":["NCIT:C84549","MESH:D056769","GARD:5787","NORD:757","MedDRA:10068783","UMLS:C0268425","ICD9:759.89","MEDGEN:78675","SCTID:63702009","OMIM:203800","DOID:0050473"],"synonyms":[{"name":"ALMS","type":"exact"},{"name":"ALSS","type":"exact"},{"name":"Alstrom syndrome","type":"exact"},{"name":"Alstrom's syndrome","type":"exact"},{"name":"Alström Syndrome","type":"exact"},{"name":"Alström syndrome","type":"exact"}],"termid":"MONDO:0008763","xrefs":{"Monarch":{"xref_id":"0008763"}}}


id: GO:0036076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Ossification wherein bone tissue forms within ligamentous tissue.","definition_xrefs":["GO_REF:0000034"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ossification","termid":"GO:0001503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ligamentous ossification","termid":"GO:0036076"}


id: GO:1903999
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of eating behavior.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:11961051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of eating behavior","termid":"GO:1903998"},{"relation_name":"is_a","term_name":"negative regulation of feeding behavior","termid":"GO:2000252"},{"relation_name":"negatively_regulates","term_name":"eating behavior","termid":"GO:0042755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of eating behavior","synonyms":[{"name":"down regulation of eating behavior","type":"exact"},{"name":"down regulation of eating behaviour","type":"exact"},{"name":"down-regulation of eating behavior","type":"exact"},{"name":"down-regulation of eating behaviour","type":"exact"},{"name":"downregulation of eating behavior","type":"exact"},{"name":"downregulation of eating behaviour","type":"exact"},{"name":"inhibition of eating behavior","type":"narrow"},{"name":"inhibition of eating behaviour","type":"narrow"},{"name":"negative regulation of eating behaviour","type":"exact"}],"termid":"GO:1903999"}


id: PBO:0068402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 220","termid":"PBO:0068402"}


id: GO:0006925
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in an inflammatory cell, any cell participating in the inflammatory response to a foreign substance e.g. neutrophil, macrophage.","definition_xrefs":["GOC:mtg_apoptosis","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process","termid":"GO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inflammatory cell apoptotic process","secondary_identifiers":["Reactome:R-HSA-168277"],"synonyms":[{"name":"apoptosis of inflammatory cells","type":"exact"},{"name":"inflammatory cell apoptosis","type":"narrow"},{"name":"inflammatory cell programmed cell death by apoptosis","type":"exact"},{"name":"killing of inflammatory cells","type":"exact"},{"name":"programmed cell death of inflammatory cells by apoptosis","type":"exact"},{"name":"programmed cell death, inflammatory cells","type":"exact"}],"termid":"GO:0006925"}


id: GO:0045624
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of T-helper cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune effector process","termid":"GO:0002699"},{"relation_name":"is_a","term_name":"positive regulation of CD4-positive, alpha-beta T cell differentiation","termid":"GO:0043372"},{"relation_name":"is_a","term_name":"regulation of T-helper cell differentiation","termid":"GO:0045622"},{"relation_name":"is_a","term_name":"positive regulation of immune response","termid":"GO:0050778"},{"relation_name":"positively_regulates","term_name":"T-helper cell differentiation","termid":"GO:0042093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of T-helper cell differentiation","synonyms":[{"name":"activation of T-helper cell differentiation","type":"narrow"},{"name":"positive regulation of T-helper cell development","type":"related"},{"name":"stimulation of T-helper cell differentiation","type":"narrow"},{"name":"up regulation of T-helper cell differentiation","type":"exact"},{"name":"up-regulation of T-helper cell differentiation","type":"exact"},{"name":"upregulation of T-helper cell differentiation","type":"exact"}],"termid":"GO:0045624"}


id: PBO:0076950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transforming growth factor beta 1","termid":"PBO:0076950"}


id: MONDO:0016828
data:
  {"annotated_genes":["SJAG_04984","SJAG_01417"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88165],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008785"},{"annotations":[87584],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014804"}]},"cv_name":"mondo","definition":"Congenital autosomal recessive sideroblastic anemia (ARSA) is a non-syndromic, microcytic/hypochromic sideroblastic anemia, present from early infancy and characterized by severe microcytic anemia, which is not pyridoxine responsive, and increased serum ferritin.","definition_xrefs":["Orphanet:260305"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"inherited sideroblastic anemia","termid":"MONDO:0020099"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01417":null,"SJAG_04984":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0006025","MONDO:0002280"],"is_obsolete":false,"name":"autosomal recessive sideroblastic anemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:895586","GARD:17240","SCTID:717050005","UMLS:C4274077"],"synonyms":[{"name":"ARSA","type":"exact"},{"name":"congenital sideroblastic anaemia","type":"broad"},{"name":"congenital sideroblastic anemia","type":"broad"},{"name":"sideroblastic anemia, autosomal recessive","type":"exact"}],"termid":"MONDO:0016828","terms_by_termid":{"MONDO:0008785":null,"MONDO:0014804":null},"xrefs":{"Monarch":{"xref_id":"0016828"}}}


id: GO:0050843
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of S-adenosylmethionine, S-(5'-adenosyl)-L-methionine, an important intermediate in one-carbon metabolism.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"S-adenosylmethionine metabolic process","termid":"GO:0046500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"S-adenosylmethionine catabolic process","synonyms":[{"name":"S-adenosyl methionine catabolic process","type":"exact"},{"name":"S-adenosyl methionine catabolism","type":"exact"},{"name":"S-adenosylmethionine breakdown","type":"exact"},{"name":"S-adenosylmethionine catabolism","type":"exact"},{"name":"S-adenosylmethionine degradation","type":"exact"},{"name":"SAM catabolic process","type":"exact"}],"termid":"GO:0050843"}


id: FYPO:0003277
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to one or more microtubules does not occur during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to microtubule during vegetative growth","termid":"FYPO:0003269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein localization to microtubule during mitosis","synonyms":[{"name":"abolished protein localisation to microtubule during mitosis","type":"exact"},{"name":"abolished protein localization to microtubule during mitosis during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to microtubule during mitosis during vegetative growth","type":"exact"},{"name":"abolished protein localization to microtubule during mitotic M phase","type":"related"},{"name":"abolished protein localization to microtubule during mitotic nuclear division","type":"exact"},{"name":"protein absent from microtubule during mitosis","type":"related"},{"name":"protein localization to microtubule abolished during mitosis","type":"exact"}],"termid":"FYPO:0003277"}


id: PBO:0027024
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_L-aminoadipate-semialdehyde_dehydrogenase_activity","termid":"PBO:0027024"}


id: PBO:0057407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548i-4","termid":"PBO:0057407"}


id: GO:1990844
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A mitochondrion that occurs in between fibrils of striated muscle cells and responds in distinct ways to physiological triggers.","definition_xrefs":["PMID:23297307","PMID:26039174"],"gene_count":0,"genotype_count":0,"name":"obsolete interfibrillar mitochondrion (obsolete GO:1990844)","synonyms":[{"name":"IFM","type":"exact"},{"name":"IMF mitochondrion","type":"exact"},{"name":"intermyofibrillar mitochondrion","type":"exact"}],"termid":"GO:1990844"}


id: MONDO:0010791
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inborn error of metabolism characterized by abnormal urinary excretion of myoglobin due to acute destruction of skeletal muscle fibers. The exact prevalence remains unknown. In the majority of cases, the disease manifests in childhood and is often triggered by exertion or infection (febrile illness). Hypertonia, muscle stiffness and muscle pain, impaired kidney function and elevated levels of serum creatine kinase are common clinical features. Mutations in the mitochondrial DNA-encoded cytochrome C oxidase genes (MT-CO1 and MT-CO2) should be considered in patients with recurrent myoglobinuria. Recently, mutations in the LPIN1 gene (chromosome 2p21) have been reported to have a causative role in three patients with recurrent episodes of myoglobinuria, originating from consanguineous families. The disorder may occur sporadically, or be inherited in either a recessive or dominant manner.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary recurrent myoglobinuria","termid":"MONDO:0020504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"myoglobinuria, recurrent","secondary_identifiers":["MESH:C564018","MEDGEN:333201","GARD:3879","OMIM:550500","UMLS:C1838877"],"synonyms":[{"name":"myoglobinuria recurrent","type":"related"},{"name":"myoglobinuria, recurrent","type":"exact"}],"termid":"MONDO:0010791","xrefs":{"Monarch":{"xref_id":"0010791"}}}


id: PBO:0048451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine C-acetyltransferase","termid":"PBO:0048451"}


id: PBO:0109003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary microtubule associated protein 3","termid":"PBO:0109003"}


id: PBO:0065060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolyl endopeptidase like","termid":"PBO:0065060"}


id: MOD:00606
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["PubMed:9254591","Unimod:286"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sulfanilic Acid (SA), heavy C13","synonyms":[{"name":"Heavy Sulfanilic Acid (SA) C13","type":"related"},{"name":"SulfanilicAcid:13C(6)","type":"related"}],"termid":"MOD:00606"}


id: PBO:0070130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 44 pseudogene","termid":"PBO:0070130"}


id: PBO:0048560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GDNF family receptor alpha like","termid":"PBO:0048560"}


id: PBO:0072519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 48","termid":"PBO:0072519"}


id: PBO:0031888
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial Citrate Exporter","termid":"PBO:0031888"}


id: PBO:0062695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily B member 6","termid":"PBO:0062695"}


id: GO:0102352
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + a 1,2-diacyl-sn-glycerol 3-phosphate = ADP + a 1,2-diacyl-sn-glycerol 3-diphosphate.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphatidate kinase activity (obsolete GO:0102352)","termid":"GO:0102352"}


id: MONDO:0021053
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant extra-adrenal parasympathetic paraganglioma arising from paraganglia adjacent to or in the bifurcation of the common carotid artery. Most patients present with a slow growing, painless mass in the neck.","definition_xrefs":["NCIT:C2932"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arterial disorder","termid":"MONDO:0000473"},{"relation_name":"is_a","term_name":"head and neck paraganglioma","termid":"MONDO:0006239"},{"relation_name":"is_a","term_name":"parasympathetic paraganglioma","termid":"MONDO:0021052"},{"relation_name":"is_a","term_name":"blood vessel neoplasm","termid":"MONDO:0021080"},{"relation_name":"is_a","term_name":"neurovascular disorder","termid":"MONDO:0043218"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carotid body paraganglioma","secondary_identifiers":["MEDGEN:2853","ICDO:8692/1","UMLS:C0007279"],"synonyms":[{"name":"carotid body chemodectoma","type":"related"},{"name":"carotid body paraganglioma","type":"exact"},{"name":"carotid body tumor","type":"related"},{"name":"carotid body tumour","type":"related"},{"name":"chemodectoma","type":"related"},{"name":"chemodectoma, undetermined","type":"related"},{"name":"paraganglioma of carotid body","type":"exact"},{"name":"paraganglioma of the carotid body","type":"related"},{"name":"tumor of carotid body","type":"related"},{"name":"tumor of the carotid body","type":"related"},{"name":"tumour of carotid body","type":"related"},{"name":"tumour of the carotid body","type":"related"}],"termid":"MONDO:0021053","xrefs":{"Monarch":{"xref_id":"0021053"}}}


id: MOD:01023
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to 3',5'-dibromo-L-tyrosine.","definition_xrefs":["DeltaMass:156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dibrominated tyrosine","termid":"MOD:01006"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3',5'-dibromo-L-tyrosine","synonyms":[{"name":"3',5'-Br2Tyr","type":"exact"}],"termid":"MOD:01023"}


id: MONDO:0013948
data:
  {"annotated_genes":["SJAG_04763"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89052],"is_not":false,"summary":null,"term":"MONDO:0013948"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"peroxisome biogenesis disorder","termid":"MONDO:0019234"},{"relation_name":"is_a","term_name":"peroxisome biogenesis disorder due to PEX3 defect","termid":"MONDO:0100261"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04763":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019053","MONDO:0005244","MONDO:0005559","MONDO:0005066"],"is_obsolete":false,"name":"peroxisome biogenesis disorder 10A (Zellweger)","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080484","GARD:15873","MEDGEN:766913","OMIM:614882","UMLS:C3553999"],"synonyms":[{"name":"PBD10A","type":"related"},{"name":"peroxisome biogenesis disorder 10A (Zellweger)","type":"exact"},{"name":"peroxisome biogenesis disorder, complementation group 12","type":"related"},{"name":"peroxisome biogenesis disorder, complementation group G","type":"related"}],"termid":"MONDO:0013948","terms_by_termid":{"MONDO:0013948":null},"xrefs":{"Monarch":{"xref_id":"0013948"}}}


id: MONDO:0100450
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal dominant vitreoretinopathy caused by variants in the CAPN5 gene. Additional features, such as developmental delay and hypotonia, have been reported in some patients.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"vitreoretinal degeneration","termid":"MONDO:0020248"},{"relation_name":"is_a","term_name":"vitreoretinal degeneration","termid":"MONDO:0020248"},{"relation_name":"is_a","term_name":"proliferative vitreoretinopathy","termid":"MONDO:0700115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"CAPN5-related vitreoretinopathy","secondary_identifiers":["SCTID:770791000","Orphanet:329211","MESH:D018630","MEDGEN:1648542","UMLS:C4721549","DOID:9719","GARD:17497","ICD9:362.29","OMIM:193235","MedDRA:10057896","SCTID:232016005"],"synonyms":[{"name":"ADNIV","type":"exact"},{"name":"CAPN5 vitreoretinopathy","type":"exact"},{"name":"VRNI","type":"exact"},{"name":"autosomal dominant neovascular inflammatory vitreoretinopathy","type":"exact"},{"name":"proliferative vitreoretinopathy","type":"broad"},{"name":"retinitis proliferans","type":"exact"},{"name":"vitreoretinopathy, neovascular inflammatory","type":"exact"},{"name":"vitreoretinopathy, neovascular inflammatory, autosomal dominant","type":"exact"}],"termid":"MONDO:0100450","xrefs":{"Monarch":{"xref_id":"0100450"}}}


id: GO:0060868
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals that modulates the rate or extent of floral organ abscission.","definition_xrefs":["GOC:sdb_2009","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of vesicle-mediated transport involved in floral organ abscission by small GTPase mediated signal transduction (obsolete GO:0060868)","termid":"GO:0060868"}


id: PBO:0075366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SOX5 antisense RNA 1","termid":"PBO:0075366"}


id: FYPO:0001100
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing Gentian violet (also known as crystal violet).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0002060","FYPO:0000139","FYPO:0000257","FYPO:0002058","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on Gentian violet","synonyms":[{"name":"normal cell population growth in presence of Gentian violet","type":"exact"},{"name":"normal cell population growth on Gentian violet","type":"exact"},{"name":"normal cell population growth on crystal violet","type":"exact"},{"name":"normal cell population growth on {4-[Bis-(4-dimethylamino-phenyl)-methylene]-cyclohexa-2,5-dienylidene}-dimethyl-ammonium chloride","type":"exact"},{"name":"normal vegetative cell population growth on Gentian violet","type":"exact"}],"termid":"FYPO:0001100"}


id: MONDO:0014526
data:
  {"annotated_genes":["SJAG_03150","SJAG_03149"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88521,88522],"is_not":false,"summary":null,"term":"MONDO:0014526"}]},"cv_name":"mondo","definition":"Any polyglucosan body myopathy in which the cause of the disease is a mutation in the GYG1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyglucosan body myopathy","termid":"MONDO:0000192"},{"relation_name":"is_a","term_name":"GYG1-related disorder of glycogen metabolism","termid":"MONDO:0100314"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03149":null,"SJAG_03150":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"polyglucosan body myopathy type 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:863889","GARD:17793","OMIM:616199","UMLS:C4015452","Orphanet:456369"],"synonyms":[{"name":"GYG1 polyglucosan body myopathy","type":"exact"},{"name":"PGBM2","type":"related"},{"name":"polyglucosan body myopathy 2","type":"related"},{"name":"polyglucosan body myopathy caused by mutation in GYG1","type":"exact"},{"name":"polyglucosan body myopathy type 2","type":"exact"}],"termid":"MONDO:0014526","terms_by_termid":{"MONDO:0014526":null},"xrefs":{"Monarch":{"xref_id":"0014526"}}}


id: PBO:0043078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholinergic receptor nicotinic alpha 7 subunit","termid":"PBO:0043078"}


id: PBO:0060516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"napsin A aspartic peptidase","termid":"PBO:0060516"}


id: PBO:0049687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepcidin antimicrobial peptide","termid":"PBO:0049687"}


id: PBO:0062847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteocrin","termid":"PBO:0062847"}


id: PBO:0110172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation factor Sls1","termid":"PBO:0110172"}


id: PBO:0016098
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae BOI2","termid":"PBO:0016098"}


id: GO:1901207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of heart looping.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of morphogenesis of an epithelium","termid":"GO:1905330"},{"relation_name":"regulates","term_name":"heart looping","termid":"GO:0001947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of heart looping","synonyms":[{"name":"regulation of cardiac looping","type":"exact"}],"termid":"GO:1901207"}


id: PBO:0076545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAT antisense RNA 1","termid":"PBO:0076545"}


id: PBO:0077035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THO complex subunit 3","termid":"PBO:0077035"}


id: PBO:0067505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 645, pseudogene","termid":"PBO:0067505"}


id: GO:1990883
data:
  {"annotated_genes":["SJAG_01877"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74125],"is_not":false,"summary":null,"term":"GO:1990883"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a cytidine in 18S rRNA + acetyl-CoA + ATP + H2O = an N(4)-acetylcytidine in 18S rRNA + ADP + phosphate + CoA + H+.","definition_xrefs":["RHEA:51424","PMID:25402480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetyltransferase activity","termid":"GO:0008080"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01877":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"18S rRNA cytidine N-acetyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:1990883","terms_by_termid":{"GO:1990883":null}}


id: MONDO:0957540
data:
  {"annotated_genes":["SJAG_03552"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88149],"is_not":false,"summary":null,"term":"MONDO:0957540"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type II","termid":"MONDO:0005501"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03552":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"congenital disorder of glycosylation, type IIaa","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5830651","MEDGEN:1841287","OMIM:620454"],"termid":"MONDO:0957540","terms_by_termid":{"MONDO:0957540":null},"xrefs":{"Monarch":{"xref_id":"0957540"}}}


id: PBO:0113534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar membrane protein involved in sterol trafficking with Npc2p; conformational changes drive sterol translocation across the glycocalyx and into the vacuolar membrane; involved in sphingolipid metabolism; cells lacking Ncr1p exhibit high levels of long chain bases (LCBs), similar to accumulation of lipids observed in patients with Neimann-Pick C disease due to loss-of-function mutations in human NPC1; transits through the vacuolar protein sorting pathway via the AP-3 pathway","termid":"PBO:0113534"}


id: GO:0099156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling in which the ligand is carried between cells by an exosome.","definition_xrefs":["GOC:dos","PMID:19837038"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"cell-cell signaling via exosome","synonyms":[{"name":"exosome mediated","type":"exact"}],"termid":"GO:0099156"}


id: PBO:0086680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching; SWAT-GFP and mCherry fusion proteins localize to the nucleus and endoplasmic reticulum respectively; YHR214C-D has a paralog, YAR069C, that arose from a segmental duplication","termid":"PBO:0086680"}


id: MONDO:1012436
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lacrimal fistula, non-human animal","termid":"MONDO:1011993"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lacrimal fistula, cattle","secondary_identifiers":["OMIA:001693-9913"],"termid":"MONDO:1012436","xrefs":{"Monarch":{"xref_id":"1012436"}}}


id: GO:0140878
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of griseofulvin, an important antifungal drug that has been in use for a long time for treating dermatophyte infections.","definition_xrefs":["PMID:23978092","PMID:20534346"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mycotoxin biosynthetic process","termid":"GO:0043386"},{"relation_name":"is_a","term_name":"organohalogen metabolic process","termid":"GO:0090345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"griseofulvin biosynthetic process","secondary_identifiers":["MetaCyc:PWY-7653"],"synonyms":[{"name":"griseofulvin anabolism","type":"exact"},{"name":"griseofulvin biosynthesis","type":"exact"},{"name":"griseofulvin formation","type":"exact"},{"name":"griseofulvin synthesis","type":"exact"}],"termid":"GO:0140878"}


id: MONDO:0002033
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the caecum","direct_ancestors":[{"relation_name":"is_a","term_name":"cecal neoplasm","termid":"MONDO:0005694"},{"relation_name":"is_a","term_name":"malignant colon neoplasm","termid":"MONDO:0021063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"cecum cancer","secondary_identifiers":["MEDGEN:57557","UMLS:C0153437","ICD10CM:C18.0","NCIT:C9329","DOID:1521","ICD9:153.4"],"synonyms":[{"name":"caecum cancer","type":"exact"},{"name":"cancer of caecum","type":"exact"},{"name":"malignant caecum neoplasm","type":"exact"},{"name":"malignant cecum neoplasm","type":"exact"},{"name":"malignant cecum tumor","type":"exact"},{"name":"malignant cecum tumour","type":"exact"},{"name":"malignant neoplasm of caecum","type":"exact"},{"name":"malignant neoplasm of cecum","type":"exact"},{"name":"malignant neoplasm of the cecum","type":"exact"},{"name":"malignant tumor of cecum","type":"exact"},{"name":"malignant tumor of the cecum","type":"exact"},{"name":"malignant tumour of cecum","type":"exact"},{"name":"malignant tumour of the cecum","type":"exact"}],"termid":"MONDO:0002033","xrefs":{"Monarch":{"xref_id":"0002033"}}}


id: MONDO:0010699
data:
  {"annotated_genes":["SJAG_04882","SJAG_03811"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87973,87974],"is_not":false,"summary":null,"term":"MONDO:0010699"}]},"cv_name":"mondo","definition":"X-linked Charcot-Marie-Tooth disease type 5 is a rare, genetic, peripheral sensorimotor neuropathy characterized by an X-linked recessive inheritance pattern and the infancy- to childhood-onset of: 1) progressive distal muscle weakness and atrophy (first appearing and more prominent in the lower extremities than the upper) which usually manifests with foot drop and gait disturbance, 2) bilateral, profound, prelingual sensorineural hearing loss and 3) progressive optic neuropathy. Females are asymptomatic and do not display the phenotype.","definition_xrefs":["Orphanet:99014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type X","termid":"MONDO:0018994"},{"relation_name":"is_a","term_name":"inborn disorder of purine metabolism","termid":"MONDO:0019236"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03811":null,"SJAG_04882":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0019254","MONDO:0005066","MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease X-linked recessive 5","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NORD:1677","UMLS:C1839566","GARD:114","OMIM:311070","DOID:0110210","SCTID:763460007","MEDGEN:374254"],"synonyms":[{"name":"CMT5X","type":"exact"},{"name":"CMTX5","type":"exact"},{"name":"Charcot-Marie-Tooth disease X-linked recessive type 5","type":"exact"},{"name":"Charcot-Marie-Tooth disease, X-linked recessive, 5","type":"exact"},{"name":"Charcot-Marie-Tooth disease, X-linked recessive, 5, X-linked recessive","type":"exact"},{"name":"Charcot-Marie-Tooth disease, X-linked recessive, type 5","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy X type 5","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy X-linked recessive 5","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, X-linked recessive, 5","type":"exact"},{"name":"Rosenberg Chutorian Syndrome","type":"exact"},{"name":"Rosenberg-Chutorian syndrome","type":"exact"},{"name":"X-linked Charcot-Marie-Tooth disease type 5","type":"exact"},{"name":"familial opticoacoustic nerve degeneration and polyneuropathy","type":"exact"},{"name":"optic atrophy, polyneuropathy, and deafness","type":"exact"},{"name":"optic atrophy, sensorineural hearing loss and polyneuropathy","type":"exact"}],"termid":"MONDO:0010699","terms_by_termid":{"MONDO:0010699":null},"xrefs":{"Monarch":{"xref_id":"0010699"}}}


id: GO:0070989
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of removing one or more methyl groups from a molecule, involving the oxidation (i.e. electron loss) of one or more atoms in the substrate.","definition_xrefs":["GOC:rl","GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"demethylation","termid":"GO:0070988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oxidative demethylation","termid":"GO:0070989"}


id: PR:Q09142
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An origin recognition complex subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR14052:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"origin recognition complex subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC685.09","secondary_identifiers":["UniProtKB:Q09142"],"synonyms":[{"name":"SPBC685.09","type":"related"},{"name":"Spom972h-ORC2","type":"exact"},{"name":"orp2","type":"related"}],"termid":"PR:Q09142"}


id: PBO:0043900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CXXC repeat containing interactor of PDZ3 domain","termid":"PBO:0043900"}


id: GO:0045048
data:
  {"annotated_genes":["SJAG_01940","SJAG_00603","SJAG_01240","SJAG_02208","SJAG_00064","SJAG_05414","SJAG_03865","SJAG_02437","SJAG_03315","SJAG_04294","SJAG_03930","SJAG_01782","SJAG_01223","SJAG_02065","SJAG_01496","SJAG_01999","SJAG_00959","SJAG_04684","SJAG_02330","SJAG_01178","SJAG_01127","SJAG_00277","SJAG_02914"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[69308,93486,96650,99864,100175,100407,103012,105332,106306,106614,108000,110153,110240,111186,112251,114110,115699,116253],"is_not":false,"summary":null,"term":"GO:0045048"},{"annotations":[74549,89738,115989,76806,116956],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071816"}]},"cv_name":"biological_process","definition":"The process that results in incorporation of a protein into an endoplasmic reticulum (ER) membrane. It depends on specific topogenic sequences of amino acids that ensure that a protein acquires the proper orientation during its insertion into the ER membrane.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein insertion into membrane","termid":"GO:0051205"},{"relation_name":"part_of","term_name":"endoplasmic reticulum organization","termid":"GO:0007029"},{"relation_name":"part_of","term_name":"protein localization to organelle","termid":"GO:0033365"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00064":null,"SJAG_00277":null,"SJAG_00603":null,"SJAG_00959":null,"SJAG_01127":null,"SJAG_01178":null,"SJAG_01223":null,"SJAG_01240":null,"SJAG_01496":null,"SJAG_01782":null,"SJAG_01940":null,"SJAG_01999":null,"SJAG_02065":null,"SJAG_02208":null,"SJAG_02330":null,"SJAG_02437":null,"SJAG_02914":null,"SJAG_03315":null,"SJAG_03865":null,"SJAG_03930":null,"SJAG_04294":null,"SJAG_04684":null,"SJAG_05414":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0061024"],"is_obsolete":false,"name":"protein insertion into ER membrane","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9609523"],"synonyms":[{"name":"integral ER membrane protein localization","type":"exact"},{"name":"integral ER membrane protein positioning","type":"exact"},{"name":"localization of protein in ER membrane","type":"exact"},{"name":"positioning of protein in ER membrane","type":"exact"},{"name":"protein insertion into endoplasmic reticulum membrane","type":"exact"},{"name":"protein-ER insertion","type":"exact"},{"name":"protein-endoplasmic reticulum insertion","type":"exact"}],"termid":"GO:0045048","terms_by_termid":{"GO:0045048":null,"GO:0071816":null}}


id: GO:0034672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process that results in the creation of defined areas or spaces within the pronephros along the anterior/posterior axis to which cells respond and eventually are instructed to differentiate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification involved in pronephros development","termid":"GO:0039017"},{"relation_name":"is_a","term_name":"anterior/posterior pattern specification involved in kidney development","termid":"GO:0072098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior/posterior pattern specification involved in pronephros development","synonyms":[{"name":"anterior/posterior pattern specification involved in pronephric kidney development","type":"exact"}],"termid":"GO:0034672"}


id: PBO:0046498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERH pseudogene 1","termid":"PBO:0046498"}


id: GO:0009843
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A thylakoid found in a cyanelle, which is a type of plastid found in certain algae. The cyanelle contains a photosynthetic membrane resembling that of cyanobacteria.","definition_xrefs":["GOC:mah","GOC:lr","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid thylakoid","termid":"GO:0031976"},{"relation_name":"part_of","term_name":"cyanelle","termid":"GO:0009842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"cyanelle thylakoid","termid":"GO:0009843"}


id: SO:0001779
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant that is found only by individuals that belong to the same pedigree.","direct_ancestors":[{"relation_name":"is_a","term_name":"variant_origin","termid":"SO:0001762"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pedigree_specific_variant","synonyms":[{"name":"pedigree specific variant","type":"exact"}],"termid":"SO:0001779"}


id: GO:0051557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of leucoanthocyanidins, a class of colorless intermediates in the biosynthetic pathway of the pigmented flavonoids.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylpropanoid biosynthetic process","termid":"GO:0009699"},{"relation_name":"is_a","term_name":"flavonoid biosynthetic process","termid":"GO:0009813"},{"relation_name":"is_a","term_name":"leucoanthocyanidin metabolic process","termid":"GO:0051556"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"leucoanthocyanidin biosynthetic process","termid":"GO:0051557"}


id: GO:0043279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an alkaloid stimulus. Alkaloids are a large group of nitrogenous substances found in naturally in plants, many of which have extracts that are pharmacologically active.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to alkaloid","termid":"GO:0043279"}


id: MONDO:0004923
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lacrimal apparatus disorder","termid":"MONDO:0001854"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"chronic inflammation of lacrimal passage","secondary_identifiers":["SCTID:267653001","ICD9:375.4","UMLS:C0155239","DOID:9935","MEDGEN:509865"],"termid":"MONDO:0004923","xrefs":{"Monarch":{"xref_id":"0004923"}}}


id: GO:0006688
data:
  {"annotated_genes":["SJAG_04878","SJAG_04913","SJAG_00506","SJAG_03015","SJAG_03953","SJAG_02168","SJAG_05311"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93624,97070,81233,114395,99317,96962,77209],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051999"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glycosphingolipid, a compound with residues of sphingoid and at least one monosaccharide.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosphingolipid metabolic process","termid":"GO:0006687"},{"relation_name":"is_a","term_name":"glycolipid biosynthetic process","termid":"GO:0009247"},{"relation_name":"is_a","term_name":"sphingolipid biosynthetic process","termid":"GO:0030148"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00506":null,"SJAG_02168":null,"SJAG_03015":null,"SJAG_03953":null,"SJAG_04878":null,"SJAG_04913":null,"SJAG_05311":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"glycosphingolipid biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9840309"],"synonyms":[{"name":"glycosphingolipid anabolism","type":"exact"},{"name":"glycosphingolipid biosynthesis","type":"exact"},{"name":"glycosphingolipid formation","type":"exact"},{"name":"glycosphingolipid synthesis","type":"exact"}],"termid":"GO:0006688","terms_by_termid":{"GO:0051999":null}}


id: PBO:0031852
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-enlarged_nucleus_during_vegetative_growth","termid":"PBO:0031852"}


id: GO:1990395
data:
  {"annotated_genes":["SJAG_04901","SJAG_03915","SJAG_01805","SJAG_01760","SJAG_02529"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95612,116985],"is_not":false,"summary":null,"term":"GO:1990395"},{"annotations":[98686,93110,115791],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902441"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the meiotic spindle pole body.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle pole body organization","termid":"GO:0051300"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"meiotic spindle organization","termid":"GO:0000212"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01760":null,"SJAG_01805":null,"SJAG_02529":null,"SJAG_03915":null,"SJAG_04901":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0007049","GO:0000226","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"meiotic spindle pole body organization","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990395","terms_by_termid":{"GO:1902441":null,"GO:1990395":null}}


id: GO:0061295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the occurrence or rate of mesenchymal stem cell death by apoptotic process that contributes to the shaping of the nephron in the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesenchymal cell apoptotic process involved in nephron morphogenesis","termid":"GO:0072039"},{"relation_name":"regulates","term_name":"mesenchymal stem cell maintenance involved in mesonephric nephron morphogenesis","termid":"GO:0061235"},{"relation_name":"regulates","term_name":"mesenchymal cell apoptotic process involved in mesonephric nephron morphogenesis","termid":"GO:1901146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesenchymal cell apoptotic process involved in mesonephric nephron morphogenesis","synonyms":[{"name":"regulation of mesenchymal stem cell apoptosis involved in mesonephric nephron morphogenesis","type":"narrow"},{"name":"regulation of mesenchymal stem cell apoptotic process involved in mesonephric nephron morphogenesis","type":"exact"}],"termid":"GO:0061295"}


id: GO:1902868
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of retina development in camera-type eye.","definition_xrefs":["GOC:mr","GOC:TermGenie","PMID:16872597","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of retina development in camera-type eye","termid":"GO:1902866"},{"relation_name":"positively_regulates","term_name":"retina development in camera-type eye","termid":"GO:0060041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of retina development in camera-type eye","synonyms":[{"name":"activation of retina development in camera-style eye","type":"narrow"},{"name":"activation of retina development in camera-type eye","type":"narrow"},{"name":"activation of retinal development","type":"related"},{"name":"positive regulation of retina development in camera-style eye","type":"exact"},{"name":"positive regulation of retinal development","type":"related"},{"name":"up regulation of retina development in camera-style eye","type":"exact"},{"name":"up regulation of retina development in camera-type eye","type":"exact"},{"name":"up regulation of retinal development","type":"related"},{"name":"up-regulation of retina development in camera-style eye","type":"exact"},{"name":"up-regulation of retina development in camera-type eye","type":"exact"},{"name":"up-regulation of retinal development","type":"related"},{"name":"upregulation of retina development in camera-style eye","type":"exact"},{"name":"upregulation of retina development in camera-type eye","type":"exact"},{"name":"upregulation of retinal development","type":"related"}],"termid":"GO:1902868"}


id: PATO:0000078
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single process inhering in a bearer by virtue of the bearer's movement or variation characterized by the regular recurrence or alternation of different quantities or conditions.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"temporal distribution quality","termid":"PATO:0002323"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhythm quality","termid":"PATO:0000078"}


id: PBO:0110101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic amino acid transmembrane transporter","termid":"PBO:0110101"}


id: GO:2000091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of mesonephric glomerular mesangial cell proliferation.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of glomerular mesangial cell proliferation","termid":"GO:0072125"},{"relation_name":"is_a","term_name":"regulation of mesonephric glomerular mesangial cell proliferation","termid":"GO:2000090"},{"relation_name":"is_a","term_name":"negative regulation of cell proliferation involved in mesonephros development","termid":"GO:2000607"},{"relation_name":"negatively_regulates","term_name":"mesonephric glomerular mesangial cell proliferation involved in mesonephros development","termid":"GO:0061269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mesonephric glomerular mesangial cell proliferation","termid":"GO:2000091"}


id: PBO:0005307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Utp13 (predicted)","termid":"PBO:0005307"}


id: PBO:0116317
data:
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id: GO:0062223
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id: PBO:0114381
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id: PBO:0000792
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id: GO:0140922
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id: GO:0030292
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id: SO:0005852
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id: PBO:0067284
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id: MONDO:0006609
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id: FYPO:0001343
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id: GO:0036163
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id: GO:0016053
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id: GO:0010262
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id: PBO:0029417
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id: MONDO:0017856
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id: PBO:0084540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the p24 family involved in ER to Golgi transport; similar to Emp24p and Erv25p; ERP4 has a paralog, ERP2, that arose from the whole genome duplication","termid":"PBO:0084540"}


id: PBO:0067672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 853, pseudogene","termid":"PBO:0067672"}


id: MONDO:1011282
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any progressive rod-cone degeneration that occurs in dogs due to a mutation in the ABCA4 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cone-rod dystrophy, non-human animal","termid":"MONDO:1012582"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Stargardt disease, ABCA4-related, dog","secondary_identifiers":["OMIA:002179-9615"],"synonyms":[{"name":"Stargardt disease 1, dog","type":"related"}],"termid":"MONDO:1011282","xrefs":{"Monarch":{"xref_id":"1011282"}}}


id: PBO:0066875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 175","termid":"PBO:0066875"}


id: GO:0099616
data:
  {"annotated_genes":["SJAG_01249","SJAG_00852"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[102274,105581],"is_not":false,"summary":null,"term":"GO:0099616"}]},"cv_name":"cellular_component","definition":"The component of the matrix side of the mitochondrial inner membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of mitochondrial inner membrane","termid":"GO:0031314"},{"relation_name":"part_of","term_name":"matrix side of mitochondrial inner membrane","termid":"GO:0099617"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00852":null,"SJAG_01249":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005739"],"is_obsolete":false,"name":"extrinsic component of matrix side of mitochondrial inner membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0099616","terms_by_termid":{"GO:0099616":null}}


id: PBO:0030184
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_cell_population","termid":"PBO:0030184"}


id: MONDO:0003223
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A solitary fibrous tumor/hemangiopericytoma that arises from the meninges.","definition_xrefs":["NCIT:C4660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemangiopericytoma","termid":"MONDO:0005094"},{"relation_name":"is_a","term_name":"malignant tumor of meninges","termid":"MONDO:0021322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"meninges hemangiopericytoma","secondary_identifiers":["DOID:4957","UMLS:C0349622","MEDGEN:83894","SCTID:277522009","ONCOTREE:HPCCNS"],"synonyms":[{"name":"hemangiopericytoma of meninges","type":"exact"},{"name":"hemangiopericytoma of the central nervous system","type":"related"},{"name":"hemangiopericytoma of the meninges","type":"exact"},{"name":"meningeal cluster hemangiopericytoma","type":"exact"},{"name":"meningeal cluster spindle cell tumor","type":"exact"},{"name":"meningeal cluster spindle cell tumour","type":"exact"},{"name":"meningeal hemangiopericytoma","type":"exact"},{"name":"meningeal solitary fibrous tumor/hemangiopericytoma","type":"exact"},{"name":"meninges hemangiopericytoma","type":"exact"}],"termid":"MONDO:0003223","xrefs":{"Monarch":{"xref_id":"0003223"}}}


id: PBO:0075529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speedy/RINGO cell cycle regulator family member E9","termid":"PBO:0075529"}


id: PBO:0052874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 6-3","termid":"PBO:0052874"}


id: GO:0047051
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-lactate + 2 [Fe(III)cytochrome c553] = 2 [Fe(II)cytochrome c553] + 2 H+ + pyruvate.","definition_xrefs":["RHEA:16465"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, cytochrome as acceptor","termid":"GO:0016898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"D-lactate dehydrogenase (cytochrome c-553) activity","secondary_identifiers":["EC:1.1.2.5","MetaCyc:1.1.2.5-RXN"],"synonyms":[{"name":"(R)-lactate:ferricytochrome-c-553 2-oxidoreductase activity","type":"related"}],"termid":"GO:0047051"}


id: PBO:0065642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase non-receptor type 20C, pseudogene","termid":"PBO:0065642"}


id: MONDO:1012048
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cerebellar cortical atrophy, non-human animal","termid":"MONDO:1011836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebellar cortical atrophy, sheep","secondary_identifiers":["OMIA:000177-9940"],"termid":"MONDO:1012048","xrefs":{"Monarch":{"xref_id":"1012048"}}}


id: PBO:0084618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Metallothionein; binds copper and mediates resistance to high concentrations of copper and cadmium; locus is variably amplified in different strains, with two copies, CUP1-1 and CUP1-2, in the genomic sequence reference strain S288C; CUP1-2 has a paralog, CUP1-1, that arose from a segmental duplication","termid":"PBO:0084618"}


id: PBO:0073783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC5A4 antisense RNA 1","termid":"PBO:0073783"}


id: PBO:0088949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Fyv7","termid":"PBO:0088949"}


id: PBO:0053380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 307","termid":"PBO:0053380"}


id: PBO:0084805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to mitochondria","termid":"PBO:0084805"}


id: PBO:0005780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element Wtf23","termid":"PBO:0005780"}


id: PBO:0031488
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-long_mitotic_spindle","termid":"PBO:0031488"}


id: PBO:0040308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase F1 subunit alpha","termid":"PBO:0040308"}


id: PBO:0042673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEA cell adhesion molecule pseudogene 7","termid":"PBO:0042673"}


id: SO:1000055
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The DNA mutation changes, usually destroys, the first coding triplet of a gene. Usually prevents translation although another initiator codon may be used.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000055 sequence_variant_causing_initiator_codon_change_in_transcript (obsolete SO:1000055)","synonyms":[{"name":"mutation causing initiator codon change in transcript","type":"related"},{"name":"sequence variant causing initiator codon change in transcript","type":"exact"}],"termid":"SO:1000055"}


id: MONDO:0017085
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete malformation of the neurenteric canal, spinal cord and column (obsolete MONDO:0017085)","secondary_identifiers":["Orphanet:268843"],"termid":"MONDO:0017085","xrefs":{"Monarch":{"xref_id":"0017085"}}}


id: PBO:0060254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYCN proto-oncogene, bHLH transcription factor","termid":"PBO:0060254"}


id: PBO:0066118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS like family 11 member B","termid":"PBO:0066118"}


id: PBO:0043417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCHC-type zinc finger nucleic acid binding protein","termid":"PBO:0043417"}


id: PBO:0002383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomere end-binding protein Pot1","termid":"PBO:0002383"}


id: GO:0046355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of mannan, the main hemicellulose of soft (coniferous) wood, made up of D-mannose, D-glucose and D-galactose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannan metabolic process","termid":"GO:0010412"},{"relation_name":"is_a","term_name":"cell wall polysaccharide catabolic process","termid":"GO:0044347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0071554","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"mannan catabolic process","synonyms":[{"name":"mannan breakdown","type":"exact"},{"name":"mannan catabolism","type":"exact"},{"name":"mannan degradation","type":"exact"}],"termid":"GO:0046355"}


id: SO:0001771
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant that has been found to be associated with disease.","direct_ancestors":[{"relation_name":"is_a","term_name":"variant_phenotype","termid":"SO:0001769"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disease_associated_variant","synonyms":[{"name":"disease associated variant","type":"exact"}],"termid":"SO:0001771"}


id: PBO:0030272
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_negative_regulation_of_mitotic_DNA_replication_initiation_resulting_in_partial_rereplication","termid":"PBO:0030272"}


id: SO:0001815
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant that does not lead to any change in the amino acid sequence.","direct_ancestors":[{"relation_name":"is_a","term_name":"coding_variant_quality","termid":"SO:0001814"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synonymous","termid":"SO:0001815"}


id: GO:0090265
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of the process of immune complex clearance by monocytes or macrophages.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune effector process","termid":"GO:0002699"},{"relation_name":"is_a","term_name":"regulation of immune complex clearance by monocytes and macrophages","termid":"GO:0090264"},{"relation_name":"positively_regulates","term_name":"immune complex clearance by monocytes and macrophages","termid":"GO:0002436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of immune complex clearance by monocytes and macrophages","termid":"GO:0090265"}


id: GO:1905592
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of optical nerve axon regeneration.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:16699509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of axon regeneration","termid":"GO:0048681"},{"relation_name":"is_a","term_name":"regulation of optical nerve axon regeneration","termid":"GO:1905591"},{"relation_name":"negatively_regulates","term_name":"optical nerve axon regeneration","termid":"GO:0101027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of optical nerve axon regeneration","synonyms":[{"name":"down regulation of optical nerve axon regeneration","type":"exact"},{"name":"down-regulation of optical nerve axon regeneration","type":"exact"},{"name":"downregulation of optical nerve axon regeneration","type":"exact"},{"name":"inhibition of optical nerve axon regeneration","type":"narrow"}],"termid":"GO:1905592"}


id: GO:0047305
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2R)-3-amino-2-methylpropanoate + pyruvate = 2-methyl-3-oxopropanoate + L-alanine.","definition_xrefs":["RHEA:18393","EC:2.6.1.40"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016769"],"is_obsolete":false,"name":"(R)-3-amino-2-methylpropionate-pyruvate transaminase activity","secondary_identifiers":["GO:0047314","MetaCyc:2.6.1.40-RXN","KEGG_REACTION:R02050","Reactome:R-HSA-909780"],"synonyms":[{"name":"(R)-3-amino-2-methylpropanoate aminotransferase activity","type":"exact"},{"name":"(R)-3-amino-2-methylpropanoate transaminase activity","type":"exact"},{"name":"(R)-3-amino-2-methylpropanoate:pyruvate aminotransferase activity","type":"related"},{"name":"(R)-3-amino-2-methylpropionate transaminase activity","type":"exact"},{"name":"(R)-3-amino-2-methylpropionate--pyruvate aminotransferase activity","type":"related"},{"name":"(R)-3-amino-2-methylpropionate-pyruvate aminotransferase activity","type":"exact"},{"name":"D-3-aminoisobutyrate--pyruvate aminotransferase activity","type":"related"},{"name":"D-3-aminoisobutyrate--pyruvate transaminase activity","type":"related"},{"name":"D-3-aminoisobutyrate-pyruvate transaminase activity","type":"related"},{"name":"D-AIBAT activity","type":"related"},{"name":"D-beta-aminoisobutyrate:pyruvate aminotransferase activity","type":"related"},{"name":"beta-aminoisobutyrate--pyruvate transaminase activity","type":"related"},{"name":"beta-aminoisobutyrate-pyruvate aminotransferase activity","type":"related"}],"termid":"GO:0047305"}


id: FYPO:0000763
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of cadmium ions than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0000003","FYPO:0000139","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"resistance to cadmium","synonyms":[{"name":"resistance to cadmium during mitotic cell cycle","type":"related"},{"name":"resistance to cadmium during vegetative growth","type":"exact"},{"name":"resistance to cadmium ion","type":"exact"},{"name":"resistance to cadmium ions","type":"exact"},{"name":"resistant to cadmium","type":"exact"}],"termid":"FYPO:0000763"}


id: MONDO:0004614
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Form of leukemia characterized by an uncontrolled proliferation of the myeloid lineage and their precursors (myeloid progenitor cells) in the bone marrow and other sites.","definition_xrefs":["MESH:D007951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic leukemia","termid":"MONDO:0001014"},{"relation_name":"is_a","term_name":"monocytic leukemia","termid":"MONDO:0004600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"chronic monocytic leukemia","secondary_identifiers":["NCIT:C34774","ICD9:206.1","MEDGEN:9729","ICD9:206.11","SCTID:188745007","DOID:8593","ICD9:206.10","UMLS:C0023466"],"synonyms":[{"name":"monocytic leukemia, chronic","type":"exact"}],"termid":"MONDO:0004614","xrefs":{"Monarch":{"xref_id":"0004614"}}}


id: GO:0010033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an organic substance stimulus.","definition_xrefs":["GOC:sm","PMID:23356676"],"gene_count":0,"genotype_count":0,"name":"obsolete response to organic substance (obsolete GO:0010033)","synonyms":[{"name":"process resulting in tolerance to organic substance","type":"narrow"}],"termid":"GO:0010033"}


id: GO:0051157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of arabitol, the pentitol derived from arabinose or lyxose by reduction of the aldehyde group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentitol catabolic process","termid":"GO:0019527"},{"relation_name":"is_a","term_name":"arabitol metabolic process","termid":"GO:0051161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"arabitol catabolic process","secondary_identifiers":["GO:0019591"],"synonyms":[{"name":"arabitol breakdown","type":"exact"},{"name":"arabitol catabolism","type":"exact"},{"name":"arabitol degradation","type":"exact"},{"name":"arabitol utilization","type":"related"}],"termid":"GO:0051157"}


id: GO:0070240
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of activated T cell autonomous cell death.","definition_xrefs":["GOC:mtg_apoptosis","ISBN:0781765196","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"negative regulation of T cell apoptotic process","termid":"GO:0070233"},{"relation_name":"is_a","term_name":"regulation of activated T cell autonomous cell death","termid":"GO:0070239"},{"relation_name":"negatively_regulates","term_name":"activated T cell autonomous cell death","termid":"GO:0070238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of activated T cell autonomous cell death","synonyms":[{"name":"down regulation of activated T cell autonomous cell death","type":"exact"},{"name":"down-regulation of activated T cell autonomous cell death","type":"exact"},{"name":"downregulation of activated T cell autonomous cell death","type":"exact"},{"name":"inhibition of activated T cell autonomous cell death","type":"narrow"},{"name":"negative regulation of ACAD","type":"broad"},{"name":"negative regulation of activated T cell apoptosis","type":"broad"},{"name":"negative regulation of activated T lymphocyte autonomous cell death","type":"exact"},{"name":"negative regulation of activated T-cell autonomous cell death","type":"exact"},{"name":"negative regulation of activated T-lymphocyte autonomous cell death","type":"exact"},{"name":"negative regulation of activated cell autonomous cell death","type":"broad"}],"termid":"GO:0070240"}


id: GO:0080112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The increase in size or mass of a seed. A seed is a propagating organ formed in the reproductive cycle of a spermatophyte, derived from the ovule and enclosing an embryo.","definition_xrefs":["GOC:dhl","PO:0009010"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth","termid":"GO:0048589"},{"relation_name":"part_of","term_name":"seed development","termid":"GO:0048316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"seed growth","termid":"GO:0080112"}


id: MOD:00735
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of an amino acid residue or of a modifying group with a hexosuronic acid group through a glycosidic bond.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylated residue","termid":"MOD:00693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"hexosuronylated","synonyms":[{"name":"HexA","type":"exact"}],"termid":"MOD:00735"}


id: PBO:0043610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COMM domain containing 3","termid":"PBO:0043610"}


id: PBO:0025461
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbohydrate metabolism disorders","termid":"PBO:0025461"}


id: PBO:0047314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAST kinase domains 3","termid":"PBO:0047314"}


id: PBO:0050120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 30","termid":"PBO:0050120"}


id: PBO:0068407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 227","termid":"PBO:0068407"}


id: PBO:0000428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA Z3","termid":"PBO:0000428"}


id: PBO:0075771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRSF2 pseudogene 1","termid":"PBO:0075771"}


id: POMBASE_GENE_EX_REL:not_happens_during
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not_happens_during","termid":"POMBASE_GENE_EX_REL:not_happens_during"}


id: PBO:0064457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POGLUT2 pseudogene 1","termid":"PBO:0064457"}


id: GO:0070720
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the receptor adaptor proteins Grb2 and SHP-2, and is involved signaling via the PDGFR signaling pathway.","definition_xrefs":["GOC:mah","PMID:8943348"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"Grb2-SHP-2 complex","synonyms":[{"name":"GRB2-SHP-2 complex, PDGF stimulated","type":"narrow"}],"termid":"GO:0070720"}


id: GO:0031937
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of chromatin silencing.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of chromatin silencing (obsolete GO:0031937)","synonyms":[{"name":"activation of chromatin silencing","type":"narrow"},{"name":"positive regulation of heterochromatic silencing","type":"exact"},{"name":"stimulation of chromatin silencing","type":"narrow"},{"name":"up regulation of chromatin silencing","type":"exact"},{"name":"up-regulation of chromatin silencing","type":"exact"},{"name":"upregulation of chromatin silencing","type":"exact"}],"termid":"GO:0031937"}


id: PBO:0018292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med19","termid":"PBO:0018292"}


id: MONDO:0020277
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ectodermal malformation syndrome associated with ocular features (obsolete MONDO:0020277)","termid":"MONDO:0020277","xrefs":{"Monarch":{"xref_id":"0020277"}}}


id: MONDO:0018595
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Single-organ polyarteritis nodosa (PAN) is a rare, often mild form of PAN characterized by limited disease without generalized manifestations, most often affecting the skin (cutaneous PAN), the brain, eyes, pancreas, testicles, ureter, breasts, or ovaries. Affected patients are often younger than those with systemic PAN and relapses appear to be more common.","definition_xrefs":["Orphanet:439755"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary polyarteritis nodosa","termid":"MONDO:0018593"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"single-organ polyarteritis nodosa","secondary_identifiers":["GARD:21832","MEDGEN:1842346","UMLS:C5680051"],"synonyms":[{"name":"single-organ PAN","type":"exact"},{"name":"single-organ periarteritis nodosa","type":"exact"}],"termid":"MONDO:0018595","xrefs":{"Monarch":{"xref_id":"0018595"}}}


id: GO:0016739
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A grouping term for oxidoreductase that cannot be more accurately categorized.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on other substrates (obsolete GO:0016739)","synonyms":[{"name":"oxidoreductase activity, acting on other substrates","type":"exact"}],"termid":"GO:0016739"}


id: GO:0015488
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glucuronide(out) + monovalent cation(out) = glucuronide(in) + monovalent cation(in).","definition_xrefs":["TC:2.A.2.3.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucuronoside transmembrane transporter activity","termid":"GO:0015164"},{"relation_name":"is_a","term_name":"glycoside-pentoside-hexuronide:cation symporter activity","termid":"GO:0015486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"glucuronide:cation symporter activity","synonyms":[{"name":"glucuronide:monovalent cation symporter activity","type":"exact"},{"name":"glucuronoside permease activity","type":"related"}],"termid":"GO:0015488"}


id: PBO:0085891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; involved in regulation of dNTP production; null mutant suppresses the lethality of lcd1 and rad53 mutations; expression is induced by Kar4p","termid":"PBO:0085891"}


id: PBO:0077504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 221","termid":"PBO:0077504"}


id: PBO:0077086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tigger transposable element derived 1","termid":"PBO:0077086"}


id: PBO:0034527
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_glutamate_synthase_(NADH)_activity","termid":"PBO:0034527"}


id: PBO:0082859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Core component of transport protein particle (TRAPP) complexes I-III; TRAPPs are multimeric guanine nucleotide-exchange factors for GTPase Ypt1p, regulating ER-Golgi traffic (TRAPPI), intra-Golgi traffic (TRAPPII), endosome-Golgi traffic (TRAPPII and III) and autophagy (TRAPPIII); mutation leads to defects in endocytic recycling, block in sporulation/meiosis; mutations in human homolog TRAPPC2 cause spondyloepiphyseal dysplasia tarda, TRAPPC2 can complement yeast null mutant","termid":"PBO:0082859"}


id: PBO:0034514
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_cleavage_furrow_rim","termid":"PBO:0034514"}


id: PBO:0087707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; essential for basal and activated transcription; direct target of Cyc8p-Tup1p transcriptional corepressor","termid":"PBO:0087707"}


id: PR:O13310
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- orb6 gene.","definition_xrefs":["UniProtKB:O13310","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase orb6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC821.12","synonyms":[{"name":"Spom972h-orb6","type":"exact"}],"termid":"PR:O13310"}


id: PBO:0029825
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_curved_elongated_vegetative_cell_population_(obsolete_FYPO:0002412)","termid":"PBO:0029825"}


id: PBO:0065460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, non-ATPase 6","termid":"PBO:0065460"}


id: PBO:0076528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 41","termid":"PBO:0076528"}


id: GO:0000184
data:
  {"annotated_genes":["SJAG_01818","SJAG_01720","SJAG_01830","SJAG_03805","SJAG_03179","SJAG_04321","SJAG_04006","SJAG_04153","SJAG_04360","SJAG_03223","SJAG_04818","SJAG_00854","SJAG_04824","SJAG_04084","SJAG_01521","SJAG_05276","SJAG_00226","SJAG_00507","SJAG_04056","SJAG_01252","SJAG_01218","SJAG_04118","SJAG_05014","SJAG_03886"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71645,75055,91719,106587,107721,115440,117237],"is_not":false,"summary":null,"term":"GO:0000184"},{"annotations":[107094,118010,110671,94892,97734,108303,106226,91616,103056,77145,90567,93338,117749,109298,120184,103904,99059],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070478"}]},"cv_name":"biological_process","definition":"The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins.","definition_xrefs":["PMID:10025395","GOC:krc","GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear-transcribed mRNA catabolic process","termid":"GO:0000956"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00226":null,"SJAG_00507":null,"SJAG_00854":null,"SJAG_01218":null,"SJAG_01252":null,"SJAG_01521":null,"SJAG_01720":null,"SJAG_01818":null,"SJAG_01830":null,"SJAG_03179":null,"SJAG_03223":null,"SJAG_03805":null,"SJAG_03886":null,"SJAG_04006":null,"SJAG_04056":null,"SJAG_04084":null,"SJAG_04118":null,"SJAG_04153":null,"SJAG_04321":null,"SJAG_04360":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_05014":null,"SJAG_05276":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0008150","GO:0016071","GO:0010467"],"is_obsolete":false,"name":"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Nonsense-mediated_decay","Reactome:R-HSA-927802","Wikipedia:Nonsense-mediated_mRNA_decay"],"synonyms":[{"name":"mRNA breakdown, nonsense-mediated decay","type":"exact"},{"name":"mRNA catabolic process, nonsense-mediated","type":"exact"},{"name":"mRNA catabolism, nonsense-mediated","type":"exact"},{"name":"mRNA degradation, nonsense-mediated decay","type":"exact"},{"name":"nonsense-mediated mRNA decay","type":"exact"},{"name":"nuclear mRNA catabolic process, nonsense-mediated decay","type":"exact"}],"termid":"GO:0000184","terms_by_termid":{"GO:0000184":null,"GO:0070478":null}}


id: PBO:0044014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase 1 alpha 1 pseudogene 3","termid":"PBO:0044014"}


id: PR:O59774
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- yps1 gene.","definition_xrefs":["UniProtKB:O59774","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartic proteinase yapsin-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1795.09","synonyms":[{"name":"Spom972h-yps1","type":"exact"}],"termid":"PR:O59774"}


id: PBO:0063307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycomb group ring finger 1","termid":"PBO:0063307"}


id: SO:0001216
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An intron that spliced via endonucleolytic cleavage and ligation rather than transesterification.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intron","termid":"SO:0000188"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endonuclease_spliced_intron","synonyms":[{"name":"endonuclease spliced intron","type":"exact"}],"termid":"SO:0001216"}


id: MONDO:0019517
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Waardenburg syndrome type 2 (WS2) is an autosomal dominant subtype of Waardenburg syndrome (WS), characterized by varying degrees of deafness and pigmentation anomalies of eyes, hair and skin, but without dystopia canthorum.","definition_xrefs":["Orphanet:895"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Waardenburg syndrome","termid":"MONDO:0018094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Waardenburg syndrome type 2","secondary_identifiers":["MEDGEN:398443","UMLS:C2700265","ICD10CM:E70.3","NCIT:C75009","GARD:5520","icd11.foundation:746815303","MESH:C536463"],"synonyms":[{"name":"WS 2","type":"related"},{"name":"WS type 2","type":"related"},{"name":"WS2","type":"exact"},{"name":"Waardenburg syndrome type 2","type":"exact"},{"name":"Waardenburg syndrome type II","type":"exact"}],"termid":"MONDO:0019517","xrefs":{"Monarch":{"xref_id":"0019517"}}}


id: PBO:0000651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAAX prenyl protease (predicted)","termid":"PBO:0000651"}


id: PR:Q09905
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is encoded by the Schizosaccharomyces pombe 972h- aps3 gene.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-3 complex subunit sigma (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC30D11.05","secondary_identifiers":["UniProtKB:Q09905"],"synonyms":[{"name":"AP-3 complex sigma3A subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-aps3","type":"exact"},{"name":"adaptor-related protein complex 3 subunit sigma (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"clathrin-associated/assembly/adaptor protein, small 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"sigma-adaptin 3A (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"sigma3-adaptin (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09905"}


id: PR:P40900
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- isp4 gene.","definition_xrefs":["UniProtKB:P40900","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sexual differentiation process protein isp4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29B5.02c","synonyms":[{"name":"Spom972h-isp4","type":"exact"}],"termid":"PR:P40900"}


id: PBO:0040871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMI1 proto-oncogene, polycomb ring finger pseudogene 1","termid":"PBO:0040871"}


id: FYPO:0003505
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which glutathione gamma-glutamylcysteinyltransferase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal glutathione gamma-glutamylcysteinyltransferase activity","termid":"FYPO:0000754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001985","FYPO:0000661","FYPO:0000654"],"is_obsolete":false,"name":"abolished glutathione gamma-glutamylcysteinyltransferase activity","synonyms":[{"name":"glutathione gamma-glutamylcysteinyltransferase activity abolished","type":"exact"}],"termid":"FYPO:0003505"}


id: PBO:0041134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB domain containing 17","termid":"PBO:0041134"}


id: PBO:0085028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-myristoylated calcium-binding protein; may have a role in intracellular signaling through its regulation of the phosphatidylinositol 4-kinase Pik1p; member of the recoverin/frequenin branch of the EF-hand superfamily; human NCS1 functionally complements the heat sensitivity of a frq1 ts mutant","termid":"PBO:0085028"}


id: MONDO:0002379
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"teratoma","termid":"MONDO:0002601"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystic teratoma","secondary_identifiers":["UMLS:C1368903","MEDGEN:234578","NCIT:C9014","icd11.foundation:882254343","DOID:2660"],"synonyms":[{"name":"cystic teratoma","type":"exact"}],"termid":"MONDO:0002379","xrefs":{"Monarch":{"xref_id":"0002379"}}}


id: GO:0006281
data:
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id: FYPO:0003244
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id: PR:O43058
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id: GO:0090414
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id: PBO:0083179
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id: GO:0099513
data:
  {"annotated_genes":["SJAG_01546","SJAG_01330","SJAG_04003","SJAG_02045","SJAG_02624","SJAG_03052","SJAG_04745","SJAG_00723","SJAG_02509","SJAG_02761","SJAG_00030","SJAG_02336","SJAG_03264","SJAG_00845","SJAG_00851","SJAG_03145","SJAG_03088","SJAG_00113","SJAG_01613","SJAG_02651","SJAG_00594","SJAG_01196","SJAG_00930","SJAG_02286","SJAG_01297","SJAG_00332","SJAG_02695","SJAG_02566","SJAG_00655","SJAG_01224","SJAG_04841","SJAG_04887","SJAG_04387","SJAG_01837","SJAG_00773","SJAG_05220","SJAG_03073","SJAG_03540","SJAG_02040","SJAG_01775","SJAG_01993","SJAG_05266","SJAG_00140","SJAG_01215","SJAG_00918"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[110895,97098,73198,78475,77283],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005884"},{"annotations":[109044,105830,113980,109257,101019],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000235"},{"annotations":[101020,103244,105699,110082,100425,93187],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0055028"},{"annotations":[105562,99385,97018],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903754"},{"annotations":[92958,70176,106692,114618,106363],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005881"},{"annotations":[99080],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0062194"},{"annotations":[102185,105701,98783,104139,115897,91434,120529],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904511"},{"annotations":[89566],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990574"},{"annotations":[98578,121182,75582,69590],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005874"},{"annotations":[102188,101025],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0036449"},{"annotations":[63078,72453,106474,121062,81189,81747,101027],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0035371"},{"annotations":[93191,63079,80580],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061673"},{"annotations":[98786],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905721"},{"annotations":[109337],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990941"},{"annotations":[108145,66726,102190,103249],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990498"},{"annotations":[100429,101030,109338,120009],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990537"},{"annotations":[93194],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005880"},{"annotations":[103252,96587],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005827"},{"annotations":[98787,103253],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905759"},{"annotations":[93196],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905760"},{"annotations":[102341,105514,77994,64009,78651,77555,91562],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005876"}]},"cv_name":"cellular_component","definition":"A component of the cytoskeleton consisting of a homo or heteropolymeric fiber constructed from an indeterminate number of protein subunits.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"supramolecular 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cytoskeletal fiber","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null,"PMID:21802294":null,"PMID:30726171":null},"termid":"GO:0099513","terms_by_termid":{"GO:0000235":null,"GO:0005827":null,"GO:0005874":null,"GO:0005876":null,"GO:0005880":null,"GO:0005881":null,"GO:0005884":null,"GO:0035371":null,"GO:0036449":null,"GO:0055028":null,"GO:0061673":null,"GO:0062194":null,"GO:1903754":null,"GO:1904511":null,"GO:1905721":null,"GO:1905759":null,"GO:1905760":null,"GO:1990498":null,"GO:1990537":null,"GO:1990574":null,"GO:1990941":null}}


id: MONDO:0017147
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Idiopathic pulmonary arterial hypertension (IPAH) is a sporadic form of pulmonary arterial hypertension (PAH) characterized by elevated pulmonary arterial resistance leading to right heart failure. IPAH is progressive and potentially fatal and not associated with an underlying condition or family history of PAH.","definition_xrefs":["Orphanet:275766"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary arterial hypertension","termid":"MONDO:0015924"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"idiopathic pulmonary arterial hypertension","secondary_identifiers":["NANDO:2201046","UMLS:C3203102","MedDRA:10065151","MEDGEN:468368","ICD9:416.0","SCTID:697898008","GARD:21025","icd11.foundation:265520344"],"synonyms":[{"name":"IPAH","type":"exact"},{"name":"primary pulmonary arterial hypertension","type":"exact"}],"termid":"MONDO:0017147","xrefs":{"Monarch":{"xref_id":"0017147"}}}


id: PBO:0059373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRPS18C pseudogene 6","termid":"PBO:0059373"}


id: PBO:0060577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 13, pseudogene","termid":"PBO:0060577"}


id: PBO:0038334
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-exacerbates_condition","termid":"PBO:0038334"}


id: PBO:0116712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAK4 antisense RNA 1","termid":"PBO:0116712"}


id: MOD:01462
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an L-proline alpha imino hydrogen with a methyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated proline","termid":"MOD:00712"},{"relation_name":"is_a","term_name":"alpha-amino methylated residue","termid":"MOD:01460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N-methylated proline","termid":"MOD:01462"}


id: MONDO:0800117
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A botromycosis that involves the skin and subcutaneous tissue (it is a more common type).","definition_xrefs":["PMID:9524833"],"direct_ancestors":[{"relation_name":"is_a","term_name":"botryomycosis","termid":"MONDO:0400006"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cutaneous botryomycosis","secondary_identifiers":["icd11.foundation:1888048529","UMLS:C0554463","MEDGEN:640409"],"termid":"MONDO:0800117","xrefs":{"Monarch":{"xref_id":"0800117"}}}


id: PBO:0077648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF alpha induced protein 8","termid":"PBO:0077648"}


id: PBO:0018177
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human B'd","termid":"PBO:0018177"}


id: PBO:0056442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARK2 pseudogene 15","termid":"PBO:0056442"}


id: GO:0102666
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: indole-3-acetyl-beta-4-D-glucose + H2O = H+ + indole-3-acetate + beta-D-glucose.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete indole-3-acetyl-beta-4-D-glucose hydrolase activity (obsolete GO:0102666)","termid":"GO:0102666"}


id: GO:0016861
data:
  {"annotated_genes":["SJAG_01346","SJAG_01455","SJAG_03614","SJAG_04192","SJAG_00839","SJAG_02648","SJAG_00070"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72878],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003949"},{"annotations":[71946],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004347"},{"annotations":[79732],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004476"},{"annotations":[70060],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004640"},{"annotations":[76271],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004751"},{"annotations":[78628],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046523"},{"annotations":[73771],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004807"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which the hydrogen donor and acceptor, which is an aldose or a ketose, are the same molecule, and no oxidized product appears.","definition_xrefs":["EC:5.3.1.-","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity","termid":"GO:0016860"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00070":null,"SJAG_00839":null,"SJAG_01346":null,"SJAG_01455":null,"SJAG_02648":null,"SJAG_03614":null,"SJAG_04192":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null},"synonyms":[{"name":"intramolecular isomerase activity, interconverting aldoses and ketoses","type":"exact"}],"termid":"GO:0016861","terms_by_termid":{"GO:0003949":null,"GO:0004347":null,"GO:0004476":null,"GO:0004640":null,"GO:0004751":null,"GO:0004807":null,"GO:0046523":null}}


id: MONDO:0000410
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute inflammation of the umbilical cord. It is characterized by the presence of polymorphonuclear cells migrating from the fetal umbilical cord vessels through the umbilical cord towards the bacteria containing amniotic fluid.","definition_xrefs":["NCIT:C97077"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"connective tissue disorder","termid":"MONDO:0003900"},{"relation_name":"is_a","term_name":"omphalitis","termid":"MONDO:0021562"},{"relation_name":"is_a","term_name":"pregnancy disorder","termid":"MONDO:0024575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"funisitis","secondary_identifiers":["DOID:0050698","ICD9:658.80","UMLS:C1275592","MEDGEN:226906","SCTID:396343006"],"termid":"MONDO:0000410","xrefs":{"Monarch":{"xref_id":"0000410"}}}


id: PBO:0002905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cofilin/tropomyosin family, drebrin ortholog Abp1","termid":"PBO:0002905"}


id: MONDO:0015170
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital sodium diarrhea is characterized by severe watery diarrhea containing high concentrations of sodium, hyponatremia and metabolic acidosis.","definition_xrefs":["Orphanet:103908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital diarrhea","termid":"MONDO:0000824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"congenital sodium diarrhea","secondary_identifiers":["MEDGEN:78632","UMLS:C0267663","SCTID:18805001","GARD:16945"],"synonyms":[{"name":"Na-H exchange deficiency","type":"exact"}],"termid":"MONDO:0015170","xrefs":{"Monarch":{"xref_id":"0015170"}}}


id: PR:Q92339
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ght3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q92339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high-affinity gluconate transporter ght3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F8.01","synonyms":[{"name":"Spom972h-ght3","type":"exact"},{"name":"hexose transporter 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q92339"}


id: PATO:0000642
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's being merged with another entity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fused with","synonyms":[{"name":"coalesced","type":"related"},{"name":"fused","type":"exact"},{"name":"fused to","type":"exact"},{"name":"joined with","type":"related"},{"name":"merged with","type":"related"}],"termid":"PATO:0000642"}


id: PBO:0088565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis ATPase, Arb family ABCF2-like","termid":"PBO:0088565"}


id: PBO:0043487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin N-terminal domain containing 1","termid":"PBO:0043487"}


id: PBO:0071662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37a pseudogene 3","termid":"PBO:0071662"}


id: GO:1900108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of nodal signaling pathway.","definition_xrefs":["GOC:BHF","GOC:vk","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of activin receptor signaling pathway","termid":"GO:0032926"},{"relation_name":"is_a","term_name":"regulation of nodal signaling pathway","termid":"GO:1900107"},{"relation_name":"negatively_regulates","term_name":"nodal signaling pathway","termid":"GO:0038092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of nodal signaling pathway","synonyms":[{"name":"down regulation of nodal signaling","type":"exact"},{"name":"down regulation of nodal signaling pathway","type":"exact"},{"name":"down-regulation of nodal signaling","type":"exact"},{"name":"down-regulation of nodal signaling pathway","type":"exact"},{"name":"downregulation of nodal signaling","type":"exact"},{"name":"downregulation of nodal signaling pathway","type":"exact"},{"name":"inhibition of nodal signaling","type":"narrow"},{"name":"inhibition of nodal signaling pathway","type":"narrow"},{"name":"negative regulation of nodal signaling","type":"exact"},{"name":"negative regulation of nodal signalling pathway","type":"exact"}],"termid":"GO:1900108"}


id: MONDO:0002879
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary malignant neoplasm of the uterine corpus characterized by the presence of an epithelial and a mesenchymal component. This category includes carcinosarcoma, carcinofibroma, and adenosarcoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant mixed neoplasm","termid":"MONDO:0005853"},{"relation_name":"is_a","term_name":"uterine corpus cancer","termid":"MONDO:0006003"},{"relation_name":"is_a","term_name":"uterine corpus mixed epithelial and mesenchymal neoplasm","termid":"MONDO:0016255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"uterine body mixed cancer","secondary_identifiers":["DOID:4114","UMLS:C1334628","MEDGEN:233163","NCIT:C6311"],"synonyms":[{"name":"malignant body of uterus mixed neoplasm","type":"exact"},{"name":"malignant body of uterus mixed tumor","type":"exact"},{"name":"malignant body of uterus mixed tumour","type":"exact"},{"name":"malignant corpus uteri mixed neoplasm","type":"exact"},{"name":"malignant corpus uteri mixed tumor","type":"exact"},{"name":"malignant corpus uteri mixed tumour","type":"exact"},{"name":"malignant mixed neoplasm of body of uterus","type":"exact"},{"name":"malignant mixed neoplasm of corpus uteri","type":"exact"},{"name":"malignant mixed neoplasm of the body of uterus","type":"exact"},{"name":"malignant mixed neoplasm of the corpus uteri","type":"exact"},{"name":"malignant mixed neoplasm of the uterine body","type":"exact"},{"name":"malignant mixed neoplasm of the uterine corpus","type":"exact"},{"name":"malignant mixed neoplasm of uterine body","type":"exact"},{"name":"malignant mixed neoplasm of uterine corpus","type":"exact"},{"name":"malignant mixed tumor of body of uterus","type":"exact"},{"name":"malignant mixed tumor of corpus uteri","type":"exact"},{"name":"malignant mixed tumor of the body of uterus","type":"exact"},{"name":"malignant mixed tumor of the corpus uteri","type":"exact"},{"name":"malignant mixed tumor of the uterine body","type":"exact"},{"name":"malignant mixed tumor of the uterine corpus","type":"exact"},{"name":"malignant mixed tumor of uterine body","type":"exact"},{"name":"malignant mixed tumor of uterine corpus","type":"exact"},{"name":"malignant mixed tumour of body of uterus","type":"exact"},{"name":"malignant mixed tumour of corpus uteri","type":"exact"},{"name":"malignant mixed tumour of the body of uterus","type":"exact"},{"name":"malignant mixed tumour of the corpus uteri","type":"exact"},{"name":"malignant mixed tumour of the uterine body","type":"exact"},{"name":"malignant mixed tumour of the uterine corpus","type":"exact"},{"name":"malignant mixed tumour of uterine body","type":"exact"},{"name":"malignant mixed tumour of uterine corpus","type":"exact"},{"name":"malignant uterine body mixed neoplasm","type":"exact"},{"name":"malignant uterine body mixed tumor","type":"exact"},{"name":"malignant uterine body mixed tumour","type":"exact"},{"name":"malignant uterine corpus mixed epithelial and mesenchymal neoplasm","type":"exact"},{"name":"malignant uterine corpus mixed tumor","type":"exact"},{"name":"malignant uterine corpus mixed tumour","type":"exact"}],"termid":"MONDO:0002879","xrefs":{"Monarch":{"xref_id":"0002879"}}}


id: MONDO:0017610
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Epidermolysis bullosa simplex (EBS) is a group of hereditary epidermolysis bullosa (HEB) disorders characterized by skin fragility resulting in intraepidermal blisters and erosions that occur either spontaneously or after physical trauma.","definition_xrefs":["Orphanet:304"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited epidermolysis bullosa","termid":"MONDO:0019276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"epidermolysis bullosa simplex","secondary_identifiers":["icd11.foundation:1860717527","MEDGEN:86896","NANDO:2201341","ICD9:757.39","MESH:D016110","DOID:4644","NANDO:2201375","NCIT:C84692","SCTID:67144006","ICD10CM:Q81.0","UMLS:C0079298","GARD:10752","NANDO:1200235","OMIMPS:131760"],"synonyms":[{"name":"EBS","type":"exact"},{"name":"EEB","type":"exact"},{"name":"epidermolysis bullosa intraepidermic","type":"related"},{"name":"epidermolysis bullosa simplex","type":"exact"}],"termid":"MONDO:0017610","xrefs":{"Monarch":{"xref_id":"0017610"}}}


id: GO:0042637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regression phase of the hair cycle during which cell proliferation ceases, the hair follicle shortens, and an anchored club hair is produced.","definition_xrefs":["PMID:12535193"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hair cycle phase","termid":"GO:0044851"},{"relation_name":"part_of","term_name":"hair follicle maturation","termid":"GO:0048820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"catagen","synonyms":[{"name":"hair regression","type":"narrow"}],"termid":"GO:0042637"}


id: PBO:0081614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 542, pseudogene","termid":"PBO:0081614"}


id: PBO:0090053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane LMBR1-like multi-pass membrane protein, human LMBRD2 ortholog, implicated in signalling","termid":"PBO:0090053"}


id: MONDO:1012117
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital hypomyelinogenesis, non-human animal","termid":"MONDO:1011845"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital hypomyelinogenesis, sheep","secondary_identifiers":["OMIA:000527-9940"],"termid":"MONDO:1012117","xrefs":{"Monarch":{"xref_id":"1012117"}}}


id: GO:0016436
data:
  {"annotated_genes":["SJAG_03773","SJAG_00722","SJAG_03008","SJAG_03332"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77426,80469,77671],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008650"},{"annotations":[81343],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070042"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + rRNA = S-adenosyl-L-homocysteine + rRNA containing methyluridine.","definition_xrefs":["GOC:go-curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA methyltransferase activity","termid":"GO:0008649"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00722":null,"SJAG_03008":null,"SJAG_03332":null,"SJAG_03773":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140098","GO:0003824","GO:0016740","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"rRNA (uridine) methyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0016436","terms_by_termid":{"GO:0008650":null,"GO:0070042":null}}


id: GO:0070081
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A clathrin-sculpted lipid bilayer membrane-enclosed vesicle after clathrin release and containing monoamines.","definition_xrefs":["GOC:mg2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport vesicle","termid":"GO:0030133"},{"relation_name":"is_a","term_name":"clathrin-sculpted vesicle","termid":"GO:0060198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"clathrin-sculpted monoamine transport vesicle","synonyms":[{"name":"clathrin sculpted monoamine constitutive secretory pathway transport vesicle","type":"exact"},{"name":"clathrin sculpted monoamine transport vesicle","type":"exact"}],"termid":"GO:0070081"}


id: MONDO:0044762
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A diarrhea that results from increased motility in the bowel; significant increases in bowel motility can deliver excessively large volumes of stool to the colon. Diarrhea can result when the maximum colonic absorptive capacity of 4 liters a day is exceeded. Also, an alteration in colonic motility such that bowel contents are emptied before adequate absorption can occur has been offered as a possible explanation for the diarrhea associated with irritable bowel disease.","direct_ancestors":[{"relation_name":"is_a","term_name":"diarrheal disease secondary to altered bowel motility","termid":"MONDO:0000251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"diarrheal disease secondary to increased bowel motility","secondary_identifiers":["DOID:0050131"],"synonyms":[{"name":"diarrhea from increased bowel motility","type":"exact"},{"name":"diarrhoea from increased bowel motility","type":"exact"},{"name":"motility-related diarrhea","type":"broad"},{"name":"motility-related diarrhoea","type":"broad"}],"termid":"MONDO:0044762","xrefs":{"Monarch":{"xref_id":"0044762"}}}


id: GO:0034105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of tissue remodeling.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tissue remodeling","termid":"GO:0034103"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"tissue remodeling","termid":"GO:0048771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of tissue remodeling","synonyms":[{"name":"positive regulation of tissue remodelling","type":"exact"}],"termid":"GO:0034105"}


id: PBO:0082838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Constituent of 66S pre-ribosomal particles; required for ribosomal large subunit maturation; functionally redundant with Ssf2p; member of the Brix family; SSF1 has a paralog, SSF2, that arose from the whole genome duplication","termid":"PBO:0082838"}


id: PBO:0090632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiolipin synthase/ hydrolase fusion protein Crd1","termid":"PBO:0090632"}


id: MONDO:0100262
data:
  {"annotated_genes":["SJAG_00702"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88630],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008954"},{"annotations":[88914],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008736"}]},"cv_name":"mondo","definition":"Any Zellweger spectrum disorder in which the cause of the disease is a mutation in the PEX5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Zellweger spectrum disorders","termid":"MONDO:0019609"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00702":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0019053","MONDO:0005559","MONDO:0006025","MONDO:0005244"],"is_obsolete":false,"name":"peroxisome biogenesis disorder due to PEX5 defect","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"PEX5 related Zellweger spectrum disorder","type":"exact"},{"name":"peroxisome biogenesis disorder due to PEX5 defect","type":"exact"}],"termid":"MONDO:0100262","terms_by_termid":{"MONDO:0008736":null,"MONDO:0008954":null},"xrefs":{"Monarch":{"xref_id":"0100262"}}}


id: GO:0002788
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of antifungal peptide production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antimicrobial peptide production","termid":"GO:0002784"},{"relation_name":"is_a","term_name":"regulation of defense response to fungus","termid":"GO:1900150"},{"relation_name":"regulates","term_name":"antifungal peptide production","termid":"GO:0002781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of antifungal peptide production","termid":"GO:0002788"}


id: PBO:0067034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 48, pseudogene","termid":"PBO:0067034"}


id: PR:Q92462
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pub1 gene.","definition_xrefs":["UniProtKB:Q92462","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin-protein ligase pub1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11G7.02","synonyms":[{"name":"Spom972h-pub1","type":"exact"}],"termid":"PR:Q92462"}


id: FYPO:0000799
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to N,N,N',N'-tetramethyldiazene-1,2-dicarboxamide, also known as diamide. Cells stop growing (and may die) at a concentration of diamide that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0000139","FYPO:0001985","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to diamide","synonyms":[{"name":"hypersensitive to diamide","type":"exact"},{"name":"sensitive to N,N,N',N'-tetramethyldiazene-1,2-dicarboxamide","type":"exact"},{"name":"sensitive to diamide during mitotic cell cycle","type":"related"},{"name":"sensitive to diamide during vegetative growth","type":"exact"}],"termid":"FYPO:0000799"}


id: GO:0051438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ubiquitin transferase activity.","definition_xrefs":["GOC:ai","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transferase activity","termid":"GO:0051338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of ubiquitin-protein transferase activity","synonyms":[{"name":"APC regulator","type":"narrow"},{"name":"SCF complex regulator","type":"narrow"},{"name":"anaphase-promoting complex regulator","type":"narrow"},{"name":"regulation of ubiquitin transferase activity","type":"exact"},{"name":"ubiquitin transferase regulator","type":"related"},{"name":"ubiquitin-protein transferase regulator","type":"related"}],"termid":"GO:0051438"}


id: GO:1990659
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of binding or confining manganese ions such that they are separated from other components of a biological system.","definition_xrefs":["PMID:25417112","GOC:bhm"],"gene_count":0,"genotype_count":0,"name":"obsolete sequestering of manganese ion (obsolete GO:1990659)","synonyms":[{"name":"manganese ion retention","type":"exact"},{"name":"manganese ion sequestering","type":"exact"},{"name":"manganese ion sequestration","type":"exact"},{"name":"manganese ion storage","type":"exact"},{"name":"retention of manganese ion","type":"exact"},{"name":"sequestration of manganese ion","type":"exact"},{"name":"storage of manganese ion","type":"exact"}],"termid":"GO:1990659"}


id: GO:0019791
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete FAT10 hydrolase activity (obsolete GO:0019791)","synonyms":[{"name":"FAT10 hydrolase activity","type":"exact"}],"termid":"GO:0019791"}


id: PBO:0088051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-like modifier involved in autophagy and the Cvt pathway; conserved; conjugated to Atg5p to form a complex involved in Atg8p lipidation; Atg5p-Atg12p conjugate enhances E2 activity of Atg3p by rearranging its catalytic site, also forms a complex with Atg16p; the Atg5-Atg12/Atg16 complex binds to membranes and is essential for autophagosome formation; homolog of mammalian ULK1","termid":"PBO:0088051"}


id: GO:0004961
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with thromboxane A2 (TXA(2)) and transmitting the signal across the membrane to activate an associated G-protein.","definition_xrefs":["GOC:signaling","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thromboxane receptor activity","termid":"GO:0004960"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"thromboxane A2 receptor activity","synonyms":[{"name":"TXA(2) receptor activity","type":"exact"},{"name":"TXA2 receptor activity","type":"exact"}],"termid":"GO:0004961"}


id: GO:0043959
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2R,3S)-beta-methylmalyl-CoA = glyoxylate + propanoyl-CoA.","definition_xrefs":["RHEA:38259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxo-acid-lyase activity","termid":"GO:0016833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"L-erythro-3-methylmalyl-CoA lyase activity","synonyms":[{"name":"HpcH/HpaI aldolase","type":"related"}],"termid":"GO:0043959"}


id: PBO:0082759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the SF3b subcomplex of the U2 snRNP; essential protein required for splicing and for assembly of SF3b","termid":"PBO:0082759"}


id: PBO:0066896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 196","termid":"PBO:0066896"}


id: GO:0007473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of the proximal/distal axis of the wing disc, a precursor to the adult wing.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proximal/distal pattern formation, imaginal disc","termid":"GO:0007449"},{"relation_name":"is_a","term_name":"wing disc pattern formation","termid":"GO:0035222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"wing disc proximal/distal pattern formation","termid":"GO:0007473"}


id: PBO:0017576
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expression level is tightly controlled so that deletion of either copy is compensated","termid":"PBO:0017576"}


id: PBO:0082399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta subunit of succinyl-CoA ligase; succinyl-CoA ligase is a mitochondrial enzyme of the TCA cycle that catalyzes the nucleotide-dependent conversion of succinyl-CoA to succinate","termid":"PBO:0082399"}


id: GO:0140656
data:
  {"annotated_genes":["SJAG_01076"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[118674],"is_not":false,"summary":null,"term":"GO:0140656"}]},"cv_name":"molecular_function","definition":"Binds to and increases the activity of an endodeoxyribonuclease.","definition_xrefs":["PMID:33836577"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclease activator activity","termid":"GO:0170053"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01076":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0140677","GO:0030234","GO:0003674"],"is_obsolete":false,"name":"endodeoxyribonuclease activator activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140656","terms_by_termid":{"GO:0140656":null}}


id: GO:0003733
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete ribonucleoprotein (obsolete GO:0003733)","synonyms":[{"name":"ribonucleoprotein","type":"exact"}],"termid":"GO:0003733"}


id: GO:0003917
data:
  {"annotated_genes":["SJAG_05193","SJAG_04816"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72167,74492],"is_not":false,"summary":null,"term":"GO:0003917"}]},"cv_name":"molecular_function","definition":"Catalysis of a DNA topological transformation by transiently cleaving one DNA strand at a time to allow passage of another strand; changes the linking number by +1 per catalytic cycle.","definition_xrefs":["PMID:8811192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA topoisomerase activity","termid":"GO:0003916"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04816":null,"SJAG_05193":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0140097","GO:0003674"],"is_obsolete":false,"name":"DNA topoisomerase type I (single strand cut, ATP-independent) activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-9914922","EC:5.6.2.1","MetaCyc:5.99.1.2-RXN"],"synonyms":[{"name":"DNA topoisomerase I activity","type":"narrow"},{"name":"deoxyribonucleate topoisomerase","type":"broad"},{"name":"nicking-closing enzyme activity","type":"related"},{"name":"omega-protein activity","type":"related"},{"name":"relaxing enzyme activity","type":"related"},{"name":"swivelase activity","type":"related"},{"name":"topoisomerase","type":"broad"},{"name":"type I DNA topoisomerase activity","type":"exact"},{"name":"type I topoisomerase activity","type":"exact"},{"name":"untwisting enzyme activity","type":"related"}],"termid":"GO:0003917","terms_by_termid":{"GO:0003917":null}}


id: MONDO:0008406
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Autosomal recessive form of Emery-Dreifuss muscular dystrophy.","definition_xrefs":["MONDO:patterns/autosomal_recessive"],"gene_count":0,"genotype_count":0,"name":"obsolete autosomal recessive Emery-Dreifuss muscular dystrophy (obsolete MONDO:0008406)","secondary_identifiers":["Orphanet:98855"],"synonyms":[{"name":"EDMD3","type":"exact"},{"name":"Emery-Dreifuss muscular dystrophy, autosomal recessive","type":"exact"}],"termid":"MONDO:0008406","xrefs":{"Monarch":{"xref_id":"0008406"}}}


id: PBO:0113208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial HMG-box protein; limits the copy number of mitochondrial DNA (mtDNA), antagonizing HMG-box containing protein Abf2p, a mtDNA packaging factor; localizes to the mitochondrial matrix; contains two HMG-boxes similar to Abf2p; null mutant is viable","termid":"PBO:0113208"}


id: PBO:0029975
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_dephosphorylation_during_mitotic_G2/M_transition","termid":"PBO:0029975"}


id: GO:1900113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of histone H3-K9 trimethylation.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone H3-K9 trimethylation (obsolete GO:1900113)","synonyms":[{"name":"down regulation of histone H3-K9 trimethylation","type":"exact"},{"name":"down-regulation of histone H3-K9 trimethylation","type":"exact"},{"name":"downregulation of histone H3-K9 trimethylation","type":"exact"},{"name":"inhibition of histone H3-K9 trimethylation","type":"narrow"}],"termid":"GO:1900113"}


id: PBO:0043184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytokine inducible SH2 containing protein","termid":"PBO:0043184"}


id: GO:0106418
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + UDP-N-acetyl-alpha-D-muramate + L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptanedioate = ADP + phosphate + UDP-N-acetylmuramoyl-L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptanedioate.","definition_xrefs":["PMID:17384195","PMID:8808921","RHEA:29563"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"UDP-N-acetylmuramate-L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptanedioate ligase activity","secondary_identifiers":["EC:6.3.2.45"],"synonyms":[{"name":"murein peptide ligase","type":"related"}],"termid":"GO:0106418"}


id: PBO:0070699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 3","termid":"PBO:0070699"}


id: MONDO:0002770
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Normal or abnormal secretions from the vagina. Mucus produced by the cervical glands is discharged from the vagina naturally, especially during the childbearing years. Causes of abnormal vaginal discharge include infectious agents (e.g., Neisseria gonorrhea, Chlamydia trachomatis, Trichomonas, and Candida albicans), the presence of foreign bodies, and cervical or vaginal cancer.","definition_xrefs":["NCIT:C50795"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vaginal disorder","termid":"MONDO:0001433"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vaginal discharge","secondary_identifiers":["DOID:3767","MESH:D019522","MEDGEN:65302","icd11.foundation:2123556104","UMLS:C0227791"],"synonyms":[{"name":"Discharge, vaginal","type":"exact"}],"termid":"MONDO:0002770","xrefs":{"Monarch":{"xref_id":"0002770"}}}


id: PBO:0048768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glia maturation factor beta pseudogene 1","termid":"PBO:0048768"}


id: FYPO:0001327
data:
  {"alleles_by_uniquename":{"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121002,121003,121004],"is_not":false,"summary":null,"term":"FYPO:0001327"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell is higher than normal when the cell is in the vegetative growth phase of the life cycle. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level","termid":"FYPO:0000836"},{"relation_name":"is_a","term_name":"altered protein level during vegetative growth","termid":"FYPO:0001325"},{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01956":null,"SJAG_03198":null,"SJAG_03351":null,"SJAG_03575":null},"genotype_count":3,"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"increased protein level during vegetative growth","references_by_uniquename":{"PMID:23786411":null},"secondary_identifiers":["FYPO:0000762"],"single_locus_annotated_genes":["SJAG_03575","SJAG_03351","SJAG_01956"],"single_locus_genotype_uniquenames":["nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"increased protein accumulation during vegetative growth","type":"related"},{"name":"increased protein level during mitotic cell cycle","type":"related"},{"name":"protein accumulation during vegetative growth","type":"related"}],"termid":"FYPO:0001327","terms_by_termid":{"FYECO:0000006":null,"FYECO:0000137":null,"FYPO:0001327":null}}


id: PBO:0050943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon alpha 14","termid":"PBO:0050943"}


id: PBO:0054897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2311","termid":"PBO:0054897"}


id: GO:0032524
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of nutrients out of a cell or organelle.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete nutrient export (obsolete GO:0032524)","synonyms":[{"name":"nutrient export","type":"exact"}],"termid":"GO:0032524"}


id: PBO:0039966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 2 binding protein pseudogene 9","termid":"PBO:0039966"}


id: MONDO:0005985
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Virus diseases caused by the togaviridae.","definition_xrefs":["MESH:D014036"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary viral infectious disease","termid":"MONDO:0100329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Togaviridae infectious disease","secondary_identifiers":["UMLS:C0040361","MEDGEN:21575"],"synonyms":[{"name":"Togaviridae caused disease or disorder","type":"exact"},{"name":"Togaviridae disease or disorder","type":"exact"}],"termid":"MONDO:0005985","xrefs":{"Monarch":{"xref_id":"0005985"}}}


id: MONDO:0010613
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acquired metabolic disease that has its basis in the disruption of glycerol kinase activity.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"inborn glycerol kinase deficiency","secondary_identifiers":["UMLS:C0268418","Orphanet:308993","GARD:21311","MEDGEN:82803","SCTID:124322002","DOID:0060363","NANDO:2200505","OMIM:307030"],"synonyms":[{"name":"GK deficiency","type":"related"},{"name":"GK1 deficiency","type":"related"},{"name":"GKD","type":"related"},{"name":"glycerol kinase deficiency","type":"exact"},{"name":"glycerol kinase deficiency, X-linked recessive","type":"exact"},{"name":"hyperglycerolemia","type":"related"},{"name":"inborn error of glycerol kinase activity","type":"exact"},{"name":"inborn glycerol kinase activity disorder","type":"exact"},{"name":"rare inborn error of glycerol kinase activity","type":"exact"}],"termid":"MONDO:0010613","xrefs":{"Monarch":{"xref_id":"0010613"}}}


id: PBO:0064075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 109","termid":"PBO:0064075"}


id: MOD:00263
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct between a cysteine residue and the tetrapyrrole compound phycoviolobilin.","definition_xrefs":["PubMed:2106585","PubMed:3208761","RESID:AA0258","Unimod:387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetrapyrrole modified residue","termid":"MOD:00700"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-phycoviolobilin-L-cysteine","synonyms":[{"name":"(4S)-3-[(1R)-1-(((2R)-2-amino-2-carboxy)ethylsulfanyl)ethyl]-8,12-bis(2-carboxyethyl)-18-ethyl-4,5-dihydro-2,7,13,17-tetramethyl-(21H,22H,24H)-biladiene-bc-1,19-dione","type":"exact"},{"name":"BINDING Phycoviolobilin chromophore (covalent; via 1 link)","type":"exact"},{"name":"PBV","type":"exact"},{"name":"PVB","type":"exact"},{"name":"PXB","type":"exact"},{"name":"Phycocyanobilin","type":"related"},{"name":"S-phycobiliviolin-L-cysteine","type":"exact"},{"name":"S-phycoviolobilin-L-cysteine","type":"exact"},{"name":"cryptobiliviolin","type":"exact"},{"name":"cryptoviolin","type":"exact"},{"name":"cryptoviolobilin","type":"exact"},{"name":"phycocyanobilin","type":"related"}],"termid":"MOD:00263"}


id: PBO:0076615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin folding cofactor A","termid":"PBO:0076615"}


id: PBO:0070320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY3 pseudogene 9","termid":"PBO:0070320"}


id: GO:0043793
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxybenzoate + 5-phospho-alpha-D-ribose 1-diphosphate + H+ = 4-(beta-D-ribofuranosyl)phenol 5'-phosphate + CO2 + diphosphate. Both 4-hydroxybenzoate and 4-aminobenzoate may be used as substrates, but only the former is known to be produced by methanogenic archaea.","definition_xrefs":["EC:2.4.2.54","PMID:12142414"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"beta-ribofuranosylaminobenzene 5'-phosphate synthase activity","synonyms":[{"name":"beta-RFAP synthase activity","type":"exact"}],"termid":"GO:0043793"}


id: PBO:0011498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial respiratory chain complex III assembly protein Mzm1","termid":"PBO:0011498"}


id: GO:0060492
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The close range interaction of two or more cells or tissues that causes the cells of the foregut to change their fates and specify the development of the lung.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organ induction","termid":"GO:0001759"},{"relation_name":"is_a","term_name":"regulation of embryonic development","termid":"GO:0045995"},{"relation_name":"is_a","term_name":"regulation of branching involved in lung morphogenesis","termid":"GO:0061046"},{"relation_name":"positively_regulates","term_name":"lung field specification","termid":"GO:0060424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung induction","termid":"GO:0060492"}


id: MONDO:0011455
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lissencephaly, familial, with cleft palate and cerebellar hypoplasia","secondary_identifiers":["UMLS:C1858419","OMIM:604382","MESH:C565781","MEDGEN:348938"],"synonyms":[{"name":"lissencephaly, familial, with cleft palate and cerebellar hypoplasia","type":"exact"}],"termid":"MONDO:0011455","xrefs":{"Monarch":{"xref_id":"0011455"}}}


id: PBO:0059042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multimerin 1","termid":"PBO:0059042"}


id: GO:0098715
data:
  {"annotated_genes":["SJAG_01406"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103475],"is_not":false,"summary":null,"term":"GO:0098715"}]},"cv_name":"biological_process","definition":"The directed movement of malonic acid from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"},{"relation_name":"is_a","term_name":"malonic acid transmembrane transport","termid":"GO:1901553"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01406":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"malonic acid import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0097406"],"synonyms":[{"name":"malonate import into cell","type":"exact"},{"name":"malonic acid import into cell","type":"exact"}],"termid":"GO:0098715","terms_by_termid":{"GO:0098715":null}}


id: MONDO:0016777
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inhalational botulism is a man-made form of botulism, a rare acquired neuromuscular junction disease with descending flaccid paralysis caused by botulinum neurotoxins (BoNTs).","definition_xrefs":["Orphanet:254504"],"direct_ancestors":[{"relation_name":"is_a","term_name":"botulism","termid":"MONDO:0005498"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhalational botulism","secondary_identifiers":["UMLS:C1443900","GARD:20746","icd11.foundation:1881625139","MEDGEN:731169","SCTID:409562009"],"synonyms":[{"name":"inhalation botulism","type":"exact"}],"termid":"MONDO:0016777","xrefs":{"Monarch":{"xref_id":"0016777"}}}


id: GO:0007168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular ligand binding to a receptor on the surface of the target cell where the receptor possesses guanylyl cyclase activity, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:mah","GOC:signaling","PMID:16815030"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme-linked receptor protein signaling pathway","termid":"GO:0007167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"receptor guanylyl cyclase signaling pathway","synonyms":[{"name":"receptor guanylyl cyclase signalling pathway","type":"exact"}],"termid":"GO:0007168"}


id: GO:1901507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of acylglycerol transport.","definition_xrefs":["GOC:TermGenie","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lipid transport","termid":"GO:0032369"},{"relation_name":"is_a","term_name":"regulation of acylglycerol transport","termid":"GO:1901506"},{"relation_name":"negatively_regulates","term_name":"acylglycerol transport","termid":"GO:0034196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of acylglycerol transport","synonyms":[{"name":"down regulation of acylglycerol transport","type":"exact"},{"name":"down regulation of glyceride transport","type":"exact"},{"name":"down-regulation of acylglycerol transport","type":"exact"},{"name":"down-regulation of glyceride transport","type":"exact"},{"name":"downregulation of acylglycerol transport","type":"exact"},{"name":"downregulation of glyceride transport","type":"exact"},{"name":"inhibition of acylglycerol transport","type":"narrow"},{"name":"inhibition of glyceride transport","type":"narrow"},{"name":"negative regulation of glyceride transport","type":"exact"}],"termid":"GO:1901507"}


id: GO:0036140
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: peptidyl L-asparagine + 2-oxoglutarate + O2 = peptidyl 3-hydroxy-L-asparagine + succinate + CO2.","definition_xrefs":["PMID:12215170","RHEA:54260","GOC:reh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"[protein]-asparagine 3-dioxygenase activity","secondary_identifiers":["GO:0102113"],"synonyms":[{"name":"hypoxia-inducible factor-asparagine oxygenase activity","type":"narrow"},{"name":"peptidyl-asparagine 3-dioxygenase activity","type":"exact"}],"termid":"GO:0036140"}


id: FYPO:0004437
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the frequency of occurrence of mitotic recombination is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:17515930","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic recombination","termid":"FYPO:0000503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal mitotic recombination frequency","synonyms":[{"name":"normal mitotic recombination frequency during vegetative growth","type":"exact"},{"name":"normal occurrence of mitotic recombination","type":"exact"},{"name":"normal recombination frequency during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004437"}


id: MONDO:0014053
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete stomatin-like protein-2, hyperphosphorylation of (obsolete MONDO:0014053)","secondary_identifiers":["OMIM:615121"],"synonyms":[{"name":"hyperphosphorylated Paratarg-7","type":"related"},{"name":"stomatin-like protein-2, hyperphosphorylation of","type":"exact"}],"termid":"MONDO:0014053","xrefs":{"Monarch":{"xref_id":"0014053"}}}


id: PBO:0074303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLX1B-SULT1A4 readthrough (NMD candidate)","termid":"PBO:0074303"}


id: GO:1904434
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of ferrous iron binding.","definition_xrefs":["GOC:BHF","GO_REF:0000059","GOC:TermGenie","PMID:18353247","GOC:kom"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of ferrous iron binding (obsolete GO:1904434)","synonyms":[{"name":"activation of ferrous iron binding","type":"narrow"},{"name":"up regulation of ferrous iron binding","type":"exact"},{"name":"up-regulation of ferrous iron binding","type":"exact"},{"name":"upregulation of ferrous iron binding","type":"exact"}],"termid":"GO:1904434"}


id: GO:0099091
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A network of proteins adjacent to the postsynaptic membrane. Its major components include the proteins that spatially and functionally organize neurotransmitter receptors in the adjacent membrane, such as anchoring and scaffolding molecules, signaling enzymes and cytoskeletal components.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membraneless organelle","termid":"GO:0043232"},{"relation_name":"part_of","term_name":"postsynaptic specialization","termid":"GO:0099572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"postsynaptic specialization, intracellular component","termid":"GO:0099091"}


id: MONDO:0031213
data:
  {"annotated_genes":["SJAG_03396"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89069],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0800042"}]},"cv_name":"mondo","definition":"A congenital genodermatosis with skin/mucosae involvement, characterized by very tight and thin skin with erosions and scaling, associated to a typical facial dysmorphism, arthrogryposis multiplex, fetal akinesia or hypokinesia deformation sequence (FADS) and pulmonary hypoplasia without neurological abnormalities.","definition_xrefs":["Orphanet:1662"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03396":null},"genotype_count":0,"is_obsolete":false,"name":"restrictive dermopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:275210","DOID:0060762","MEDGEN:98356","UMLS:C0406585","GARD:1516"],"synonyms":[{"name":"hyperkeratosis-contracture syndrome","type":"narrow"},{"name":"lethal hyperkeratosis-contracture syndrome","type":"exact"},{"name":"lethal restrictive dermopathy","type":"exact"},{"name":"lethal tight skin-contracture syndrome","type":"exact"},{"name":"tight skin contracture syndrome","type":"exact"}],"termid":"MONDO:0031213","terms_by_termid":{"MONDO:0800042":null},"xrefs":{"Monarch":{"xref_id":"0031213"}}}


id: PBO:0044415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily T member 1, pseudogene","termid":"PBO:0044415"}


id: PR:O14104
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lys12 gene.","definition_xrefs":["UniProtKB:O14104","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homoisocitrate dehydrogenase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31G5.04","synonyms":[{"name":"HICDH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-lys12","type":"exact"}],"termid":"PR:O14104"}


id: GO:0033004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of mast cell activation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte activation","termid":"GO:0002695"},{"relation_name":"is_a","term_name":"regulation of mast cell activation","termid":"GO:0033003"},{"relation_name":"negatively_regulates","term_name":"mast cell activation","termid":"GO:0045576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mast cell activation","termid":"GO:0033004"}


id: PBO:0075078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 128","termid":"PBO:0075078"}


id: PBO:0060740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase complex assembly factor 5","termid":"PBO:0060740"}


id: PBO:0084878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the small subunit; PET123 exhibits genetic interactions with PET122, which encodes a COX3 mRNA-specific translational activator","termid":"PBO:0084878"}


id: GO:0018792
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: bis(4-chlorophenyl)acetate + H+ = CO2 + bis(4-chlorophenyl)methane. Bis(4-chlorophenyl)acetate is also known as DDA; bis(4-chlorophenyl)methane is also known as DDM.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete bis(4-chlorophenyl)acetate decarboxylase activity (obsolete GO:0018792)","synonyms":[{"name":"DDA decarboxylase activity","type":"exact"}],"termid":"GO:0018792"}


id: MONDO:0008911
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"histiocytoid cardiomyopathy","termid":"MONDO:0010771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"cardiac lipidosis, familial","secondary_identifiers":["MEDGEN:395234","GARD:15148","MESH:C565884","OMIM:212080","UMLS:C1859332"],"synonyms":[{"name":"cardiac lipidosis, familial","type":"exact"}],"termid":"MONDO:0008911","xrefs":{"Monarch":{"xref_id":"0008911"}}}


id: PBO:0059371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRPS18C pseudogene 4","termid":"PBO:0059371"}


id: GO:0120268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a paraflagellar rod, a large lattice-like axial structure found in some flagellated protists which extends alongside the axoneme.","definition_xrefs":["GOC:ach","GOC:krc","PMID:23787017","PMID:32295845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"motile cilium assembly","termid":"GO:0044458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"paraflagellar rod assembly","synonyms":[{"name":"PFR assembly","type":"related"},{"name":"paraflagellar rod biogenesis","type":"exact"},{"name":"paraflagellar rod formation","type":"exact"}],"termid":"GO:0120268"}


id: FYPO:0001288
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a phospholipid measured in a cell is higher than normal. A phospholipid is any lipid containing phosphoric acid as a mono- or di-ester.","definition_xrefs":["CHEBI:16247","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered phospholipid level","termid":"FYPO:0001287"},{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased phospholipid level","synonyms":[{"name":"increased cellular phospholipid level","type":"exact"},{"name":"increased phospholipid accumulation","type":"related"},{"name":"increased phospholipid level during mitotic cell cycle","type":"related"},{"name":"increased phospholipid level during vegetative growth","type":"exact"}],"termid":"FYPO:0001288"}


id: GO:0075154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism activates, maintains or increases the frequency, rate or extent of its transmembrane receptor-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transmembrane receptor-mediated signal transduction in response to host (obsolete GO:0075154)","termid":"GO:0075154"}


id: GO:0036521
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism modulates the frequency, rate or extent of protein localisation to the host phagosome. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:PARL","GOC:bf","PMID:25063865"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host protein localization to phagocytic vesicle (obsolete GO:0036521)","synonyms":[{"name":"modulation by symbiont of host protein localisation to phagosome","type":"related"}],"termid":"GO:0036521"}


id: PBO:0064718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 54","termid":"PBO:0064718"}


id: PBO:0075377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRY-box transcription factor 14","termid":"PBO:0075377"}


id: MONDO:1010437
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cardiomyopathy that occurs in golden hamster.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiomyopathy, non-human animal","termid":"MONDO:1010010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiomyopathy, golden hamster","secondary_identifiers":["OMIA:000160-10036"],"termid":"MONDO:1010437","xrefs":{"Monarch":{"xref_id":"1010437"}}}


id: PBO:0074824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 20","termid":"PBO:0074824"}


id: GO:0000461
data:
  {"annotated_genes":["SJAG_04174"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76269],"is_not":false,"summary":null,"term":"GO:0000461"}]},"cv_name":"biological_process","definition":"Endonucleolytic cleavage at the 3'-end of the SSU-rRNA from an originally tricistronic rRNA transcript that contained the Small Subunit (SSU) rRNA, the 5.8S rRNA, and the Large Subunit (LSU) rRNA in that order from 5' to 3' along the primary transcript, to produce the mature end of the SSU-rRNA.","definition_xrefs":["GOC:krc","PMID:10690410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000479"},{"relation_name":"is_a","term_name":"rRNA 3'-end processing","termid":"GO:0031125"},{"relation_name":"part_of","term_name":"maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000462"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04174":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0010467","GO:0042254"],"is_obsolete":false,"name":"endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"endonucleolytic cleavage at site D","type":"narrow"}],"termid":"GO:0000461","terms_by_termid":{"GO:0000461":null}}


id: PR:O43036
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpa43 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43036"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I subunit rpa43 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B9.07c","synonyms":[{"name":"DNA-dependent RNA polymerase 19 kDa polypeptide (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase I subunit A43 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rpa43","type":"exact"}],"termid":"PR:O43036"}


id: MONDO:0017355
data:
  {"annotated_genes":["SJAG_00660","SJAG_00212","SJAG_02235","SJAG_01903","SJAG_00120","SJAG_03457","SJAG_00516","SJAG_01471"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89047,89048],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009053"},{"annotations":[86784,86785],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014702"},{"annotations":[88891],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018163"},{"annotations":[86946],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013051"},{"annotations":[88609],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0027462"},{"annotations":[88608],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0027451"},{"annotations":[87779,87780],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014706"},{"annotations":[88278,88279],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011006"},{"annotations":[88531],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009400"},{"annotations":[88489],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009401"},{"annotations":[87386],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010208"}]},"cv_name":"mondo","definition":"An inherited metabolic disease that is has its basis in the disruption of proline metabolic process.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of amino acid metabolism","termid":"MONDO:0004736"},{"relation_name":"is_a","term_name":"inborn disorder of ornithine or proline metabolism","termid":"MONDO:0019230"},{"relation_name":"is_a","term_name":"disorder of organic acid metabolism","termid":"MONDO:0045022"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00120":null,"SJAG_00212":null,"SJAG_00516":null,"SJAG_00660":null,"SJAG_01471":null,"SJAG_01903":null,"SJAG_02235":null,"SJAG_03457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"inborn disorder of proline metabolism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:289866","UMLS:C5681004","MEDGEN:1842611","icd11.foundation:1707028291","GARD:21157"],"synonyms":[{"name":"disorder of proline metabolism","type":"exact"},{"name":"inborn error of proline metabolic process","type":"exact"},{"name":"inborn proline metabolic process disorder","type":"exact"},{"name":"rare inborn error of proline metabolic process","type":"exact"}],"termid":"MONDO:0017355","terms_by_termid":{"MONDO:0009053":null,"MONDO:0009400":null,"MONDO:0009401":null,"MONDO:0010208":null,"MONDO:0011006":null,"MONDO:0013051":null,"MONDO:0014702":null,"MONDO:0014706":null,"MONDO:0018163":null,"MONDO:0027451":null,"MONDO:0027462":null},"xrefs":{"Monarch":{"xref_id":"0017355"}}}


id: PBO:0113218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Moonlighting protein component of both the ERMES and SAM complex; subunit of the ERMES complex that acts as a molecular tether between the mitochondria and the ER, necessary for both efficient phospholipid exchange between organelles and for mitophagy; SAM/TOB complex subunit that functions in the assembly of outer membrane beta-barrel proteins; involved in mitochondrial inheritance and morphology; ERMES complex often co-localizes with peroxisomes adjacent to mitochondria-ER junctions","termid":"PBO:0113218"}


id: GO:0009574
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A dense band of microtubules, 1-3 pm wide, that appears just beneath the cell membrane before the start of cell division in the cells of higher plants. It precedes the onset of prophase and then disappears as mitosis begins, yet it somehow determines the plane of orientation of the new cell plate forming in late telophase and marks the zone of the parental cell wall where fusion with the growing cell plate ultimately occurs.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"},{"relation_name":"part_of","term_name":"microtubule cytoskeleton","termid":"GO:0015630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0015630","GO:0005737"],"is_obsolete":false,"name":"preprophase band","secondary_identifiers":["Wikipedia:Preprophase_band"],"termid":"GO:0009574"}


id: GO:0030547
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and modulates the activity of a signaling receptor.","definition_xrefs":["GOC:ceb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor regulator activity","termid":"GO:0030545"},{"relation_name":"is_a","term_name":"molecular function inhibitor activity","termid":"GO:0140678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140678"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0140678"],"is_obsolete":false,"name":"signaling receptor inhibitor activity","synonyms":[{"name":"receptor inhibitor activity","type":"broad"}],"termid":"GO:0030547"}


id: PBO:0070016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1313, pseudogene","termid":"PBO:0070016"}


id: PBO:0043104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondroitin sulfate synthase 1","termid":"PBO:0043104"}


id: PBO:0089579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF3128 family, human c22orf39 ortholog","termid":"PBO:0089579"}


id: PBO:0002308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT-type ubiquitin-protein ligase E3 Pub1","termid":"PBO:0002308"}


id: FYPO:0006404
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the spindle pole body is broken into fragments.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle pole body morphology","termid":"FYPO:0004607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"fragmented spindle pole body","synonyms":[{"name":"fragmented SPB","type":"exact"},{"name":"spindle pole body fragmentation","type":"exact"}],"termid":"FYPO:0006404"}


id: MONDO:0007419
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Darwinian tubercle of pinna (obsolete MONDO:0007419)","termid":"MONDO:0007419","xrefs":{"Monarch":{"xref_id":"0007419"}}}


id: PBO:0057178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 329-2","termid":"PBO:0057178"}


id: PBO:0083156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps ORF YIL067C","termid":"PBO:0083156"}


id: GO:0002254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A series of reactions that takes place outside the cell that occur as a result of by-products of tissue damage, including collagen, cartilage, and basement membrane. The ultimate product of the kinin cascade include kallidin and bradykinin, agents known to induce smooth muscle contraction, vasoconstriction, and increased vascular permeability.","definition_xrefs":["ISBN:0721601871","GOC:jal","PMID:11842287","PMID:14501145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute inflammatory response","termid":"GO:0002526"},{"relation_name":"is_a","term_name":"protein activation cascade","termid":"GO:0072376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0051604","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"kinin cascade","termid":"GO:0002254"}


id: PBO:0090878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Zip1","termid":"PBO:0090878"}


id: GO:0072143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a mesangial cell in the kidney over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"mesangial cell differentiation","termid":"GO:0072007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesangial cell development","termid":"GO:0072143"}


id: MONDO:0016736
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A central nervous system neoplasm mostly occurring in the fourth ventricle region. It is characterized by the presence of neurocytes forming pseudorosettes and astrocytes which contain Rosenthal fibers. Cytologic atypia is minimal.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mixed neuronal-glial tumor","termid":"MONDO:0016729"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rosette-forming glioneuronal tumor of fourth ventricule","secondary_identifiers":["NCIT:C129431","GARD:13593","MEDGEN:1377578","Orphanet:251975","UMLS:C4331262","DOID:0081284"],"synonyms":[{"name":"DNT of the cerebellum","type":"exact"},{"name":"RGNT","type":"exact"},{"name":"dysembryoplastic neuroepithelial tumor of cerebellum","type":"exact"},{"name":"dysembryoplastic neuroepithelial tumour of cerebellum","type":"exact"},{"name":"rosette-forming glioneuronal tumor","type":"exact"},{"name":"rosette-forming glioneuronal tumour","type":"exact"}],"termid":"MONDO:0016736","xrefs":{"Monarch":{"xref_id":"0016736"}}}


id: PBO:0071048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 50","termid":"PBO:0071048"}


id: MONDO:0015717
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mild hemophilia B is a form of hemophilia B characterized by a small deficiency of factor IX leading to abnormal bleeding as a result of minor injuries, or following surgery or tooth extraction.","definition_xrefs":["Orphanet:169799"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemophilia B","termid":"MONDO:0010604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"mild hemophilia B","secondary_identifiers":["GARD:17058","MEDGEN:1826003","UMLS:C5679574"],"synonyms":[{"name":"mild factor IX deficiency","type":"exact"},{"name":"mild haemophilia type B","type":"exact"},{"name":"mild hemophilia type B","type":"exact"}],"termid":"MONDO:0015717","xrefs":{"Monarch":{"xref_id":"0015717"}}}


id: MONDO:0030917
data:
  {"annotated_genes":["SJAG_01146"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86897],"is_not":false,"summary":null,"term":"MONDO:0030917"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01146":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual disability, autosomal dominant 51","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080232","OMIM:617788","MEDGEN:1625009","UMLS:C4540474"],"synonyms":[{"name":"MRD51","type":"related"},{"name":"autosomal dominant intellectual disability 51","type":"related"},{"name":"autosomal dominant mental retardation 51","type":"related"},{"name":"intellectual disability, autosomal dominant 51","type":"exact"},{"name":"mental retardation, autosomal dominant 51","type":"related"}],"termid":"MONDO:0030917","terms_by_termid":{"MONDO:0030917":null},"xrefs":{"Monarch":{"xref_id":"0030917"}}}


id: MOD:01455
data:
  {"annotated_genes":["SJAG_03012","SJAG_02763","SJAG_02183","SJAG_02498","SJAG_00318","SJAG_01587","SJAG_00331","SJAG_02472","SJAG_02592"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[82350,82426,82210,82237,82393,82425],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00042"},{"annotations":[121252,82327,121390,121253,82326,121388,121391,121389],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00046"}]},"cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue hydroxyl or carboxyl hydrogen with a phosphono group (H2PO3 or 'phosphate').","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorylated residue","termid":"MOD:00696"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00318":null,"SJAG_00331":null,"SJAG_01587":null,"SJAG_02183":null,"SJAG_02472":null,"SJAG_02498":null,"SJAG_02592":null,"SJAG_02763":null,"SJAG_03012":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00696"}],"interesting_parent_ids":["MOD:00696"],"is_obsolete":false,"name":"O-phosphorylated residue","references_by_uniquename":{"PMID:26774782":null,"PMID:31150379":null,"PMID:36408920":null},"synonyms":[{"name":"OPhosRes","type":"exact"}],"termid":"MOD:01455","terms_by_termid":{"GO:0034599":null,"GO:0034605":null,"GO:0071475":null,"GO:1904547":null,"MOD:00042":null,"MOD:00046":null}}


id: GO:1905470
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of clathrin-coated pit assembly.","definition_xrefs":["GO_REF:0000058","GOC:PARL","GOC:bf","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of clathrin-coated pit assembly (obsolete GO:1905470)","synonyms":[{"name":"activation of clathrin-coated pit assembly","type":"narrow"},{"name":"activation of clathrin-coated pit formation","type":"narrow"},{"name":"activation of coated pit assembly","type":"narrow"},{"name":"activation of coated pit formation","type":"narrow"},{"name":"positive regulation of clathrin-coated pit formation","type":"exact"},{"name":"positive regulation of coated pit assembly","type":"exact"},{"name":"positive regulation of coated pit formation","type":"exact"},{"name":"up regulation of clathrin-coated pit assembly","type":"exact"},{"name":"up regulation of clathrin-coated pit formation","type":"exact"},{"name":"up regulation of coated pit assembly","type":"exact"},{"name":"up regulation of coated pit formation","type":"exact"},{"name":"up-regulation of clathrin-coated pit assembly","type":"exact"},{"name":"up-regulation of clathrin-coated pit formation","type":"exact"},{"name":"up-regulation of coated pit assembly","type":"exact"},{"name":"up-regulation of coated pit formation","type":"exact"},{"name":"upregulation of clathrin-coated pit assembly","type":"exact"},{"name":"upregulation of clathrin-coated pit formation","type":"exact"},{"name":"upregulation of coated pit assembly","type":"exact"},{"name":"upregulation of coated pit formation","type":"exact"}],"termid":"GO:1905470"}


id: PBO:0012591
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"premature initiation of mitosis","termid":"PBO:0012591"}


id: PBO:0015680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF4E, 4F complex E subunit isoform 2, stress response factor","termid":"PBO:0015680"}


id: PBO:0001975
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ataxia-ocular apraxia 2","termid":"PBO:0001975"}


id: PBO:0045422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"divergent-paired related homeobox pseudogene 2","termid":"PBO:0045422"}


id: GO:0004087
data:
  {"annotated_genes":["SJAG_00412","SJAG_00964","SJAG_00392"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73040,95234,112937],"is_not":false,"summary":null,"term":"GO:0004087"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 ATP + hydrogencarbonate + NH4+ = 2 ADP + carbamoyl phosphate + 2 H+ + phosphate.","definition_xrefs":["RHEA:18029","EC:6.3.4.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00392":null,"SJAG_00412":null,"SJAG_00964":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"carbamoyl-phosphate synthase (ammonia) activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-70555","KEGG_REACTION:R00149","MetaCyc:RXN-13202"],"synonyms":[{"name":"CPS I activity","type":"narrow"},{"name":"carbamoyl phosphate synthase (ammonia) activity","type":"exact"},{"name":"carbamoyl-phosphate synthetase (ammonia) activity","type":"related"},{"name":"carbamoyl-phosphate synthetase I activity","type":"related"},{"name":"carbamoylphosphate synthase (ammonia)","type":"related"},{"name":"carbamoylphosphate synthase activity","type":"related"},{"name":"carbamoylphosphate synthetase (ammonia) activity","type":"related"},{"name":"carbamylphosphate synthetase I","type":"related"},{"name":"carbamylphosphate synthetase activity","type":"related"},{"name":"carbmoylphosphate synthetase activity","type":"related"},{"name":"carbon-dioxide--ammonia ligase activity","type":"related"},{"name":"carbon-dioxide:ammonia ligase (ADP-forming, carbamate-phosphorylating)","type":"related"}],"termid":"GO:0004087","terms_by_termid":{"GO:0004087":null}}


id: GO:0050202
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-(4-hydroxyphenyl)-2-aminoethanol = (4-hydroxyphenyl)acetaldehyde + NH4.","definition_xrefs":["EC:4.2.1.87","RHEA:18173"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"octopamine dehydratase activity","secondary_identifiers":["MetaCyc:OCTOPAMINE-DEHYDRATASE-RXN","KEGG_REACTION:R03358"],"synonyms":[{"name":"octopamine hydro-lyase (deaminating)","type":"related"},{"name":"octopamine hydro-lyase [deaminating; (4-hydroxyphenyl)acetaldehyde-forming]","type":"related"},{"name":"octopamine hydrolyase activity","type":"related"}],"termid":"GO:0050202"}


id: PBO:0028710
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_meiotic_spindle_pole_body","termid":"PBO:0028710"}


id: GO:1990879
data:
  {"annotated_genes":["SJAG_02362","SJAG_04245"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[64279,112218],"is_not":false,"summary":null,"term":"GO:1990879"}]},"cv_name":"cellular_component","definition":"A complex formed by the association of Cdc13 (CTC1 in mammals) with Stn1 in yeast (OBFC1 in mammals) and Ten1 protein (also TEN1 in mammals) with single-stranded telomeric DNA. The CST complex plays a role in telomere protection.","definition_xrefs":["GOC:BHF_telomere","GOC:nc","PMID:19854130","GOC:BHF","PMID:22965356"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear telomere cap complex","termid":"GO:0000783"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02362":null,"SJAG_04245":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005694","GO:0005575"],"is_obsolete":false,"name":"CST complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"CTC1-OBFC1-TEN1 complex","type":"narrow"},{"name":"Cdc13-Stn1-Ten1 complex","type":"narrow"}],"termid":"GO:1990879","terms_by_termid":{"GO:1990879":null}}


id: MONDO:1010197
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Myositis ossificans that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myopathy, non-human animal","termid":"MONDO:1010195"},{"relation_name":"is_a","term_name":"inflammatory disease, non-human animal","termid":"MONDO:1011327"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myositis ossificans, non-human animal","secondary_identifiers":["OMIA:000697"],"termid":"MONDO:1010197","xrefs":{"Monarch":{"xref_id":"1010197"}}}


id: GO:0034690
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An integrin complex that comprises one alphaD subunit and one beta2 subunit.","definition_xrefs":["PMID:12297042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrin complex","termid":"GO:0008305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"integrin alphaD-beta2 complex","synonyms":[{"name":"Itgad-Itgb2 complex","type":"narrow"},{"name":"alphaD-beta2 integrin complex","type":"exact"}],"termid":"GO:0034690"}


id: PBO:0004716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L32 (predicted)","termid":"PBO:0004716"}


id: MONDO:0011686
data:
  {"annotated_genes":["SJAG_02527"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88880],"is_not":false,"summary":null,"term":"MONDO:0011686"}]},"cv_name":"mondo","definition":"LIG4 syndrome is a hereditary disorder associated with impaired DNA double-strand break repair mechanisms and characterized by microcephaly, unusual facial features, growth and developmental delay, skin anomalies, and pancytopenia, which is associated with combined immunodeficiency (CID).","definition_xrefs":["Orphanet:99812"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"non-SCID combined immunodeficiency","termid":"MONDO:0018814"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"T-B- severe combined immunodeficiency","termid":"MONDO:0017855"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02527":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"DNA ligase IV deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C564694","UMLS:C1847827","OMIM:606593","GARD:15000","NCIT:C122657","DOID:0060021","SCTID:724177005","MEDGEN:339855"],"synonyms":[{"name":"DNA ligase IV deficiency","type":"exact"},{"name":"LIG4 syndrome","type":"exact"},{"name":"ligase 4 syndrome","type":"exact"}],"termid":"MONDO:0011686","terms_by_termid":{"MONDO:0011686":null},"xrefs":{"Monarch":{"xref_id":"0011686"}}}


id: PBO:0082402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta subunit of the F1 sector of mitochondrial F1F0 ATP synthase; which is a large, evolutionarily conserved enzyme complex required for ATP synthesis; F1 translationally regulates ATP6 and ATP8 expression to achieve a balanced output of ATP synthase genes encoded in nucleus and mitochondria; phosphorylated","termid":"PBO:0082402"}


id: PBO:0051453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 5-48 (non-functional)","termid":"PBO:0051453"}


id: PBO:0047339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrillin 1","termid":"PBO:0047339"}


id: MONDO:0002268
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An uncomfortable, often painful feeling in the stomach, resulting from impaired digestion. Symptoms include burning stomach pain, bloating, heartburn, nausea, and vomiting. Causes include gastritis, gastric ulcer, gastroesophageal reflux disease, pancreatic disease, and gallbladder disease.","definition_xrefs":["NCIT:C26756"],"direct_ancestors":[{"relation_name":"is_a","term_name":"functional gastric disease","termid":"MONDO:0001318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"dyspepsia","secondary_identifiers":["MEDGEN:41681","MESH:D004415","DOID:2321","EFO:0008533","ICD10CM:K30","icd11.foundation:869622187","UMLS:C0013395"],"synonyms":[{"name":"dyspepsia, indigestion","type":"exact"},{"name":"indigestion","type":"exact"}],"termid":"MONDO:0002268","xrefs":{"Monarch":{"xref_id":"0002268"}}}


id: GO:0031898
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The double lipid bilayer enclosing the chromoplast and separating its contents from the rest of the cytoplasm; includes the intermembrane space.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid envelope","termid":"GO:0009526"},{"relation_name":"part_of","term_name":"chromoplast","termid":"GO:0009509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"chromoplast envelope","termid":"GO:0031898"}


id: PBO:0074377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMG1 pseudogene 3","termid":"PBO:0074377"}


id: GO:0070034
data:
  {"annotated_genes":["SJAG_01720","SJAG_00566","SJAG_03855","SJAG_03460","SJAG_04586","SJAG_00939","SJAG_05979"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[66091,71642,72409,79359,109962,113414,114749],"is_not":false,"summary":null,"term":"GO:0070034"}]},"cv_name":"molecular_function","definition":"Binding to the telomerase RNA template.","definition_xrefs":["GOC:krc","PMID:16884717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00566":null,"SJAG_00939":null,"SJAG_01720":null,"SJAG_03460":null,"SJAG_03855":null,"SJAG_04586":null,"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003723","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"telomerase RNA binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"TERC binding","type":"related"}],"termid":"GO:0070034","terms_by_termid":{"GO:0070034":null}}


id: MONDO:0019929
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The 49,XXXXY syndrome represents a chromosomal anomaly of the aneuploidic type characterized by the presence of three extra X chromosomes in males.","definition_xrefs":["Orphanet:96264"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"sex chromosome disorder of sex development","termid":"MONDO:0017975"},{"relation_name":"is_a","term_name":"chromosome X disorder","termid":"MONDO:0700027"},{"relation_name":"is_a","term_name":"pentasomy","termid":"MONDO:0700085"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"49,XXXXY syndrome","secondary_identifiers":["MEDGEN:75573","ICD9:758.81","MESH:D007713","NCIT:C185635","UMLS:C0265499","SCTID:38847009","GARD:5679"],"synonyms":[{"name":"49,XXXXY","type":"related"},{"name":"XXXXY syndrome","type":"related"}],"termid":"MONDO:0019929","xrefs":{"Monarch":{"xref_id":"0019929"}}}


id: PBO:0073393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET domain containing 7, histone lysine methyltransferase","termid":"PBO:0073393"}


id: PBO:0073612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIAH2 antisense RNA 1","termid":"PBO:0073612"}


id: PBO:0005270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein complex subunit 6 (predicted)","termid":"PBO:0005270"}


id: PBO:0086514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved across S. cerevisiae strains; large-scale analyses show mRNA expression increases under anaerobic conditions and two-hybrid interactions with Sst2p","termid":"PBO:0086514"}


id: FYPO:0001728
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-serine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular amino acid level","termid":"FYPO:0003986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular serine level","synonyms":[{"name":"increased cellular L-serine level","type":"exact"},{"name":"increased cellular serine level during mitotic cell cycle","type":"related"},{"name":"increased cellular serine level during vegetative growth","type":"exact"},{"name":"increased serine accumulation","type":"related"}],"termid":"FYPO:0001728"}


id: PBO:0050203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 20","termid":"PBO:0050203"}


id: PBO:0048663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol kinase 5","termid":"PBO:0048663"}


id: PBO:0038576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABRAXAS1 pseudogene 1","termid":"PBO:0038576"}


id: MONDO:0018590
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"amyloidosis","termid":"MONDO:0019065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0021179"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0021179"],"is_obsolete":false,"name":"ABeta2M amyloidosis","secondary_identifiers":["GARD:21829","MEDGEN:1842860","Orphanet:439246","DOID:0080928","UMLS:C5680053","icd11.foundation:448754119"],"synonyms":[{"name":"Beta2-microglobulinic amyloidosis","type":"exact"}],"termid":"MONDO:0018590","xrefs":{"Monarch":{"xref_id":"0018590"}}}


id: PBO:0081858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF790 antisense RNA 1","termid":"PBO:0081858"}


id: GO:0047766
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O-carbamoyl-L-serine + H2O + H+ = CO2 + 2 NH4 + pyruvate.","definition_xrefs":["EC:4.3.1.13","RHEA:15445"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonia-lyase activity","termid":"GO:0016841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"carbamoyl-serine ammonia-lyase activity","secondary_identifiers":["KEGG_REACTION:R00213","MetaCyc:CARBAMOYL-SERINE-AMMONIA-LYASE-RXN"],"synonyms":[{"name":"O-carbamoyl-L-serine ammonia-lyase (decarboxylating; pyruvate-forming)","type":"related"},{"name":"O-carbamoyl-L-serine ammonia-lyase (pyruvate-forming)","type":"related"},{"name":"O-carbamoyl-L-serine deaminase activity","type":"related"},{"name":"carbamoylserine deaminase activity","type":"related"}],"termid":"GO:0047766"}


id: PR:Q09714
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC18B11.08c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09714"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C18B11.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18B11.08c","synonyms":[{"name":"Spom972h-SPAC18B11.08c","type":"exact"}],"termid":"PR:Q09714"}


id: PBO:0081346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 154","termid":"PBO:0081346"}


id: PBO:0038540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABHD14A-ACY1 readthrough","termid":"PBO:0038540"}


id: MONDO:0004699
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-Hodgkin or Hodgkin lymphoma that arises from any part of the digestive system, with the bulk of the disease localized to that site.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system cancer","termid":"MONDO:0002516"},{"relation_name":"is_a","term_name":"lymphoma","termid":"MONDO:0005062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"gastrointestinal lymphoma","secondary_identifiers":["ICD9:202.80","MEDGEN:148147","NCIT:C38162","UMLS:C0740372","SCTID:449072004","DOID:903"],"synonyms":[{"name":"digestive system lymphoma","type":"exact"},{"name":"gastrointestinal lymphoma","type":"exact"},{"name":"lymphoma of digestive system","type":"exact"},{"name":"primary digestive system lymphoma","type":"exact"},{"name":"primary gastrointestinal lymphoma","type":"exact"}],"termid":"MONDO:0004699","xrefs":{"Monarch":{"xref_id":"0004699"}}}


id: PBO:0082929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic and mitochondrial alanyl-tRNA synthetase; required for protein synthesis; point mutation (cdc64-1 allele) causes cell cycle arrest at G1; lethality of null mutation is functionally complemented by human homolog AARS; mutations in human homolog AARS are associated with autoimmune disease polymyositis/dermatomyositis and with hereditary peripheral neuropathy, Charcot-Marie-Tooth (CMT) disease","termid":"PBO:0082929"}


id: PBO:0109033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MESD pseudogene 1","termid":"PBO:0109033"}


id: MONDO:0015227
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete non-syndromic limb malformation (obsolete MONDO:0015227)","secondary_identifiers":["Orphanet:109011"],"synonyms":[{"name":"isolated limb malformation","type":"related"},{"name":"nonsyndromic limb malformation","type":"exact"}],"termid":"MONDO:0015227","xrefs":{"Monarch":{"xref_id":"0015227"}}}


id: MONDO:0015772
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Trisomy 8q is a very rare disorder characterized by duplication of the long arm of chromosome 8. The most commonly associated abnormalities include low birth weight, craniofacial abnormalities (prominent forehead, flat occiput, hypertelorism, upslanting palpebral fissures, ear and nose deformities, thin upper lips), congenital heart defects, skeletal defects, psychomotor retardation. Phenotypic features vary in relation to the duplication size.","definition_xrefs":["Orphanet:1752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of the long arm of chromosome 8","termid":"MONDO:0016959"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trisomy 8q","secondary_identifiers":["GARD:5362","icd11.foundation:573390171","MEDGEN:162775","MESH:C538020","NCIT:C36428","UMLS:C0795829"],"synonyms":[{"name":"8q duplication","type":"related"},{"name":"8q trisomy","type":"related"},{"name":"Duplication 8q","type":"exact"},{"name":"chromosome 8q duplication","type":"related"},{"name":"partial trisomy 8q","type":"related"},{"name":"trisomy type 8q","type":"exact"}],"termid":"MONDO:0015772","xrefs":{"Monarch":{"xref_id":"0015772"}}}


id: PR:O14103
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC31G5.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14103"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein rot1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31G5.02","synonyms":[{"name":"Spom972h-SPAC31G5.02","type":"exact"}],"termid":"PR:O14103"}


id: CHEBI:17713
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dAMP","termid":"CHEBI:17713"}


id: GO:0097581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a lamellipodium. A lamellipodium is a thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments.","definition_xrefs":["PMID:16054028","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection organization","termid":"GO:0120036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lamellipodium organization","termid":"GO:0097581"}


id: GO:1990372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A response that results in a state of tolerance to organic acid.","definition_xrefs":["GOC:mengo_curators","PMID:23356676"],"gene_count":0,"genotype_count":0,"name":"obsolete process resulting in tolerance to organic acid (obsolete GO:1990372)","termid":"GO:1990372"}


id: PBO:0000990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U5 snRNP complex subunit Brr2 (predicted)","termid":"PBO:0000990"}


id: GO:0009174
data:
  {"annotated_genes":["SJAG_04354","SJAG_00694","SJAG_00444","SJAG_03708","SJAG_00533","SJAG_03164","SJAG_04709","SJAG_04713","SJAG_00197","SJAG_00964"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59484,62707,61710,59858,57334],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044205"},{"annotations":[69603],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009224"},{"annotations":[90266,94785,69604,93788,89272],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044206"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pyrimidine ribonucleoside monophosphate, a compound consisting of a pyrimidine base linked to a ribose sugar esterified with phosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside monophosphate biosynthetic process","termid":"GO:0009130"},{"relation_name":"is_a","term_name":"ribonucleoside monophosphate biosynthetic process","termid":"GO:0009156"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside monophosphate metabolic process","termid":"GO:0009173"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00197":null,"SJAG_00444":null,"SJAG_00533":null,"SJAG_00694":null,"SJAG_00964":null,"SJAG_03164":null,"SJAG_03708":null,"SJAG_04354":null,"SJAG_04709":null,"SJAG_04713":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"pyrimidine ribonucleoside monophosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000041":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"pyrimidine ribonucleoside monophosphate anabolism","type":"exact"},{"name":"pyrimidine ribonucleoside monophosphate biosynthesis","type":"exact"},{"name":"pyrimidine ribonucleoside monophosphate formation","type":"exact"},{"name":"pyrimidine ribonucleoside monophosphate synthesis","type":"exact"}],"termid":"GO:0009174","terms_by_termid":{"GO:0009224":null,"GO:0044205":null,"GO:0044206":null}}


id: PR:P36603
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribonucleoside-diphosphate reductase small chain that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PMID:20516199","PomBase:MAH","PMID:12867051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"},{"relation_name":"is_a","term_name":"ribonucleoside-diphosphate reductase small chain (Schizosaccharomyces pombe)","termid":"PR:000036299"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonucleoside-diphosphate reductase small chain (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25D12.04","secondary_identifiers":["UniProtKB:P36603","PR:000027714"],"synonyms":[{"name":"SPBC25D12.04","type":"related"},{"name":"SUC22","type":"related"},{"name":"Spom972h-suc22","type":"exact"}],"termid":"PR:P36603"}


id: GO:0120076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of endocardial cushion cell differentiation.","definition_xrefs":["GOC:BHF_miRNA","GOC:BHF","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endocardial cushion cell differentiation","termid":"GO:0120074"},{"relation_name":"is_a","term_name":"negative regulation of cardiocyte differentiation","termid":"GO:1905208"},{"relation_name":"negatively_regulates","term_name":"endocardial cushion cell differentiation","termid":"GO:0061443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of endocardial cushion cell differentiation","termid":"GO:0120076"}


id: FYPO:0001622
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-threonine measured in the vacuole is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in vacuole","termid":"FYPO:0001603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal vacuolar threonine level","synonyms":[{"name":"normal level of threonine in vacuole","type":"exact"},{"name":"normal vacuolar L-threonine level","type":"exact"},{"name":"normal vacuolar threonine level during mitotic cell cycle","type":"related"},{"name":"normal vacuolar threonine level during vegetative growth","type":"exact"}],"termid":"FYPO:0001622"}


id: PBO:0001916
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.1.1.20","termid":"PBO:0001916"}


id: PBO:0063629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"profilin 1 pseudogene 6","termid":"PBO:0063629"}


id: FYECO:0000254
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in medium containing glucose, salts, water and with ammonium as the nitrogen source.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose MM, ammonium nitrogen source","termid":"FYECO:0000254"}


id: MONDO:0003977
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete fibrillary astrocytoma (obsolete MONDO:0003977)","termid":"MONDO:0003977","xrefs":{"Monarch":{"xref_id":"0003977"}}}


id: GO:0047693
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O = AMP + H+ + diphosphate.","definition_xrefs":["RHEA:14245"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate diphosphatase activity","termid":"GO:0047429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0047429"}],"interesting_parent_ids":["GO:0003674","GO:0047429","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"ATP diphosphatase activity","secondary_identifiers":["MetaCyc:ATP-PYROPHOSPHATASE-RXN","EC:3.6.1.8"],"synonyms":[{"name":"ATP diphosphohydrolase","type":"broad"},{"name":"ATP diphosphohydrolase (diphosphate-forming)","type":"exact"},{"name":"ATP pyrophosphatase activity","type":"exact"},{"name":"adenosine triphosphate pyrophosphatase activity","type":"exact"}],"termid":"GO:0047693"}


id: PBO:0084336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kinetochore-associated protein; required for chromosome segregation and kinetochore clustering; required for normal segregation of chromosomes in meiosis and mitosis; component of the FEAR regulatory network, which promotes Cdc14p release from the nucleolus during anaphase; potential Cdc28p substrate","termid":"PBO:0084336"}


id: GO:0035212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Competitive interactions within multicellular organisms between cell populations that differ in growth rates, leading to the elimination of the slowest-growing cells.","definition_xrefs":["GOC:bf","PMID:1116643","PMID:15066286"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"},{"relation_name":"is_a","term_name":"regulation of growth","termid":"GO:0040008"},{"relation_name":"part_of","term_name":"multicellular organism development","termid":"GO:0007275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell competition in a multicellular organism","termid":"GO:0035212"}


id: GO:0007600
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to receive a sensory stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process.","definition_xrefs":["GOC:dph","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system process","termid":"GO:0050877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception","secondary_identifiers":["Wikipedia:Perception","Reactome:R-HSA-9709957"],"termid":"GO:0007600"}


id: PBO:0064990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich mitotic checkpoint control factor","termid":"PBO:0064990"}


id: GO:0051161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving arabitol, the pentitol derived from arabinose or lyxose by reduction of the aldehyde group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentitol metabolic process","termid":"GO:0019519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"arabitol metabolic process","synonyms":[{"name":"arabitol metabolism","type":"exact"}],"termid":"GO:0051161"}


id: PATO:0000619
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's being overfilled.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crowded","termid":"PATO:0000619"}


id: PBO:0017918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug166","termid":"PBO:0017918"}


id: PBO:0048136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FMR1 autosomal homolog 2","termid":"PBO:0048136"}


id: PBO:0091082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"candidate Dms1 ortholog, syntenic position (possible gene prediction error)","termid":"PBO:0091082"}


id: PBO:0034566
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_J-shaped_vegetative_cell_with_curved_cytoplasmic_microtubules","termid":"PBO:0034566"}


id: PBO:0047872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(3)(p24.2)","termid":"PBO:0047872"}


id: GO:0052485
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism stops, prevents, or reduces the frequency, rate or extent of the inflammatory response of a symbiont organism; the inflammatory response is the immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by organism of symbiont inflammatory response (obsolete GO:0052485)","synonyms":[{"name":"negative regulation by organism of symbiont inflammatory response","type":"exact"}],"termid":"GO:0052485"}


id: PBO:0028643
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_dehydrodolichyl_diphosphate_synthase_activity","termid":"PBO:0028643"}


id: GO:1902874
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of horizontal cell localization.","definition_xrefs":["PMID:16872597","GO_REF:0000058","GOC:TermGenie","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of horizontal cell localization","termid":"GO:1902872"},{"relation_name":"positively_regulates","term_name":"horizontal cell localization","termid":"GO:0035852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of horizontal cell localization","synonyms":[{"name":"activation of horizontal cell localisation","type":"narrow"},{"name":"activation of horizontal cell localization","type":"narrow"},{"name":"activation of horizontal cell positioning","type":"narrow"},{"name":"activation of laminar positioning of retinal horizontal cell","type":"narrow"},{"name":"activation of retinal horizontal cell positioning","type":"narrow"},{"name":"positive regulation of horizontal cell localisation","type":"exact"},{"name":"positive regulation of horizontal cell positioning","type":"exact"},{"name":"positive regulation of laminar positioning of retinal horizontal cell","type":"exact"},{"name":"positive regulation of retinal horizontal cell positioning","type":"exact"},{"name":"up regulation of horizontal cell localisation","type":"exact"},{"name":"up regulation of horizontal cell localization","type":"exact"},{"name":"up regulation of horizontal cell positioning","type":"exact"},{"name":"up regulation of laminar positioning of retinal horizontal cell","type":"exact"},{"name":"up regulation of retinal horizontal cell positioning","type":"exact"},{"name":"up-regulation of horizontal cell localisation","type":"exact"},{"name":"up-regulation of horizontal cell localization","type":"exact"},{"name":"up-regulation of horizontal cell positioning","type":"exact"},{"name":"up-regulation of laminar positioning of retinal horizontal cell","type":"exact"},{"name":"up-regulation of retinal horizontal cell positioning","type":"exact"},{"name":"upregulation of horizontal cell localisation","type":"exact"},{"name":"upregulation of horizontal cell localization","type":"exact"},{"name":"upregulation of horizontal cell positioning","type":"exact"},{"name":"upregulation of laminar positioning of retinal horizontal cell","type":"exact"},{"name":"upregulation of retinal horizontal cell positioning","type":"exact"}],"termid":"GO:1902874"}


id: MONDO:0017500
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital absence of both lower leg and foot","termid":"MONDO:0017444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"congenital absence of both lower leg and foot, unilateral","secondary_identifiers":["icd11.foundation:608099172","Orphanet:295097"],"synonyms":[{"name":"tibiofibular terminal transverse meromelia, unilateral","type":"exact"}],"termid":"MONDO:0017500","xrefs":{"Monarch":{"xref_id":"0017500"}}}


id: _global:assayed_transcript
data:
  {"annotation_feature_type":"gene","cv_name":"fypo_extension_relations","definition":"Relation between a phenotype and a transcript, such as a gene product or transcript type in SO, with which the phenotype was assayed.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"assayed_using","termid":"_global:assayed_using"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assayed_transcript","termid":"_global:assayed_transcript"}


id: PBO:0059248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L17","termid":"PBO:0059248"}


id: GO:0090534
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein complex that carries out the reaction: ATP + H2O + Ca2+(out) = ADP + phosphate + Ca2+(in).","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cation-transporting ATPase complex","termid":"GO:0090533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"calcium ion-transporting ATPase complex","termid":"GO:0090534"}


