# terms

id: MONDO:0017150
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Pulmonary arterial hypertension associated with another disease is a group of conditions that lead to PAH; connective tissue diseases (lupus erythematosus, systemic sclerosis and mixed connective tissues disease), congenital heart disease (Eisenmenger syndrome), HIV infection, portal hypertension, schistosomiasis and chronic hemolytic anemia, which is characterized by elevated pulmonary arterial resistance leading to right heart failure that is progressive and potentially fatal.","definition_xrefs":["Orphanet:275791"],"gene_count":0,"genotype_count":0,"name":"obsolete pulmonary arterial hypertension associated with another disease (obsolete MONDO:0017150)","secondary_identifiers":["NANDO:2201048"],"synonyms":[{"name":"PAH associated with another disease","type":"exact"},{"name":"secondary PAH","type":"exact"}],"termid":"MONDO:0017150","xrefs":{"Monarch":{"xref_id":"0017150"}}}


id: PBO:0059807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 33","termid":"PBO:0059807"}


id: GO:0099030
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the postsynaptic specialization membrane consisting of the gene products that are tethered to the membrane only by a covalently attached anchor, such as a lipid group that is embedded in the membrane. Gene products with peptide sequences that are embedded in the membrane are excluded from this grouping.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete anchored component of postsynaptic specialization membrane (obsolete GO:0099030)","termid":"GO:0099030"}


id: MONDO:0043310
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Transient complete or partial monocular blindness due to retinal ischemia. This may be caused by emboli from the CAROTID ARTERY (usually in association with CAROTID STENOSIS) and other locations that enter the central RETINAL ARTERY. (From Adams et al., Principles of Neurology, 6th ed, p245)","definition_xrefs":["MESH:D020757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blindness (disorder)","termid":"MONDO:0001941"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amaurosis fugax","secondary_identifiers":["ICD10CM:G45.3","NCIT:C84550","icd11.foundation:691084626","UMLS:C0149793","MEDGEN:57702","SCTID:88032003"],"synonyms":[{"name":"amaurosis fugax","type":"exact"},{"name":"amaurosis fugax (one sided temporary vision loss)","type":"related"},{"name":"blindness, monocular, transient","type":"related"},{"name":"blindness, transient monocular","type":"related"},{"name":"momentary blindness","type":"related"},{"name":"monocular blindness, transient","type":"related"},{"name":"transient monocular blindness","type":"related"}],"termid":"MONDO:0043310","xrefs":{"Monarch":{"xref_id":"0043310"}}}


id: PR:Q9UT52
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mod21 gene.","definition_xrefs":["UniProtKB:Q9UT52","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-tubulin complex subunit mod21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC806.08c","synonyms":[{"name":"Spom972h-mod21","type":"exact"}],"termid":"PR:Q9UT52"}


id: GO:1905680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of innate immunity memory response.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of innate immune response","termid":"GO:0045088"},{"relation_name":"regulates","term_name":"innate immunity memory response","termid":"GO:0090714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of innate immunity memory response","termid":"GO:1905680"}


id: FYPO:0003227
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the long cytoplasmic microtubules characteristic of interphase cells remain present after mitosis begins and the mitotic spindle forms.","definition_xrefs":["PomBase:mah","PMID:18799626"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton during vegetative growth","termid":"FYPO:0004315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0002399","FYPO:0001320","FYPO:0005447","FYPO:0000054"],"is_obsolete":false,"name":"interphase microtubules present during mitosis","synonyms":[{"name":"interphase cytoplasmic microtubules present during mitosis","type":"exact"},{"name":"interphase microtubules present during M phase of mitotic cell cycle","type":"related"},{"name":"interphase microtubules present during mitosis during vegetative growth","type":"exact"},{"name":"interphase microtubules present during mitotic M phase","type":"related"},{"name":"interphase microtubules present during mitotic nuclear division","type":"exact"}],"termid":"FYPO:0003227"}


id: PBO:0084753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial matrix co-chaperonin; inhibits the ATPase activity of Hsp60p, a mitochondrial chaperonin; involved in protein folding and sorting in the mitochondria; 10 kD heat shock protein with similarity to E. coli groES","termid":"PBO:0084753"}


id: MONDO:0009351
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Homocarnosinosis is a metabolic defect characterized by progressive spastic diplegia, intellectual deficit and retinitis pigmentosa. This extremely rare disorder has been reported in only one family, namely a woman and three of her children. The latter showed progressive spastic diplegia, mental retardation and retinitis pigmentosa but their mother was symptom free. It is therefore uncertain whether there is a relationship between the biochemical defect and the clinical symptoms. Inheritance in the reported family seems to be autosomal dominant.","definition_xrefs":["Orphanet:2168"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gamma-amino butyric acid metabolism disorder","termid":"MONDO:0000698"},{"relation_name":"is_a","term_name":"inborn disorder of peptide metabolism","termid":"MONDO:0019232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"homocarnosinosis","secondary_identifiers":["ICD9:277.89","MESH:C535328","OMIM:236130","SCTID:61764000","UMLS:C0268632","DOID:0060177","GARD:2730","icd11.foundation:166229372","MEDGEN:75703"],"synonyms":[{"name":"Homocarnosinase deficiency","type":"exact"},{"name":"homocarnosinosis","type":"exact"}],"termid":"MONDO:0009351","xrefs":{"Monarch":{"xref_id":"0009351"}}}


id: FYPO:0005701
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the interphase microtubule organizing center does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000934"},{"relation_name":"is_a","term_name":"abnormal protein localization to microtubule organizing center","termid":"FYPO:0005702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to iMTOC","synonyms":[{"name":"abolished protein localisation to iMTOC","type":"exact"},{"name":"abolished protein localization to iMTOC during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to iMTOC during vegetative growth","type":"exact"},{"name":"abolished protein localization to interphase microtubule organizing center","type":"exact"},{"name":"protein absent from iMTOC","type":"related"},{"name":"protein localization to iMTOC abolished","type":"exact"}],"termid":"FYPO:0005701"}


id: PBO:0086748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; predicted to be a glycosylphosphatidylinositol-modified (GPI) protein; YHR214W has a paralog, YAR066W, that arose from a segmental duplication","termid":"PBO:0086748"}


id: MONDO:0014070
data:
  {"annotated_genes":["SJAG_00115"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86926],"is_not":false,"summary":null,"term":"MONDO:0014070"}]},"cv_name":"mondo","definition":"Oculocutaneous albinism type 7 (OCA7), formerly called OCA5, is a form of oculocutaneous albinism (OCA) characterized by skin and hair hypopigmentation, nystagmus and iris transillumination.","definition_xrefs":["Orphanet:352745"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oculocutaneous albinism","termid":"MONDO:0018910"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00115":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005093"],"is_obsolete":false,"name":"oculocutaneous albinism type 7","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0070100","OMIM:615179","GARD:17531","MEDGEN:815116","SCTID:722059002","UMLS:C3808786"],"synonyms":[{"name":"LRMDA oculocutaneous albinism","type":"exact"},{"name":"OCA7","type":"exact"},{"name":"albinism, oculocutaneous, type 7","type":"related"},{"name":"albinism, oculocutaneous, type VII","type":"related"},{"name":"oculocutaneous albinism caused by mutation in LRMDA","type":"exact"},{"name":"oculocutaneous albinism type VII","type":"related"}],"termid":"MONDO:0014070","terms_by_termid":{"MONDO:0014070":null},"xrefs":{"Monarch":{"xref_id":"0014070"}}}


id: PBO:0046069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit L","termid":"PBO:0046069"}


id: MONDO:0019228
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited metabolic disease that is has its basis in the disruption of histidine metabolic process.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"inborn disorder of amino acid and other organic acid metabolism","termid":"MONDO:0019189"},{"relation_name":"is_a","term_name":"inborn disorder of amino acid metabolism","termid":"MONDO:0004736"},{"relation_name":"is_a","term_name":"inborn disorder of amino acid and other organic acid metabolism","termid":"MONDO:0019189"},{"relation_name":"is_a","term_name":"disorder of organic acid metabolism","termid":"MONDO:0045022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"inborn disorder of histidine metabolism","secondary_identifiers":["icd11.foundation:543162269","Orphanet:79181","ICD10CM:E70.40","DOID:9265","SCTID:44176004","UMLS:C0268512","GARD:18959","ICD9:270.5","MEDGEN:541342"],"synonyms":[{"name":"disorder of histidine metabolic process","type":"exact"},{"name":"disorder of histidine metabolism","type":"exact"},{"name":"disturbance of histidine metabolism","type":"exact"},{"name":"histidine metabolic process disease","type":"exact"},{"name":"histidine metabolism disease","type":"exact"},{"name":"inborn disorder of histidine metabolism","type":"exact"},{"name":"inborn error of histidine metabolic process","type":"exact"},{"name":"inborn error of histidine metabolism","type":"exact"},{"name":"inborn histidine metabolic process disorder","type":"exact"},{"name":"rare inborn error of histidine metabolic process","type":"exact"}],"termid":"MONDO:0019228","xrefs":{"Monarch":{"xref_id":"0019228"}}}


id: GO:0045560
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of the TRAIL (TNF-related apoptosis inducing ligand) receptor.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of TRAIL receptor biosynthetic process (obsolete GO:0045560)","synonyms":[{"name":"regulation of TRAIL receptor anabolism","type":"exact"},{"name":"regulation of TRAIL receptor biosynthesis","type":"exact"},{"name":"regulation of TRAIL receptor formation","type":"exact"},{"name":"regulation of TRAIL receptor synthesis","type":"exact"}],"termid":"GO:0045560"}


id: PBO:0089004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino]imidazole-4-carboxamide isomerase His6","termid":"PBO:0089004"}


id: PBO:0064478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POLG alternative reading frame","termid":"PBO:0064478"}


id: PBO:0076172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfotransferase family 1C member 3","termid":"PBO:0076172"}


id: PBO:0059873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotubularin related protein 10","termid":"PBO:0059873"}


id: GO:0015473
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A porin that acts in the assembly of fimbria together with fimbrial chaperone.","definition_xrefs":["TC:1.B.11.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porin activity","termid":"GO:0015288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"fimbrial usher porin activity","termid":"GO:0015473"}


id: MONDO:0000942
data:
  {"annotated_genes":["SJAG_00638","SJAG_04387","SJAG_02509"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88190],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007376"},{"annotations":[87776,87777],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054771"}]},"cv_name":"mondo","definition":"A non-neoplastic or neoplastic disorder that affects the cornea. Representative examples include keratitis, bullous keratopathy, and squamous cell carcinoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00638":null,"SJAG_02509":null,"SJAG_04387":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"corneal disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C26731","EFO:0009464","ICD9:371.30","ICD9:371.89","ICD9:371.9","MESH:D003316","UMLS:C0010034","MEDGEN:3617","DOID:10124","SCTID:15250008"],"synonyms":[{"name":"cornea disease","type":"exact"},{"name":"cornea disease or disorder","type":"exact"},{"name":"corneal disease","type":"exact"},{"name":"corneal disorder","type":"exact"},{"name":"disease of cornea","type":"exact"},{"name":"disease or disorder of cornea","type":"exact"},{"name":"disorder of cornea","type":"exact"}],"termid":"MONDO:0000942","terms_by_termid":{"MONDO:0007376":null,"MONDO:0054771":null},"xrefs":{"Monarch":{"xref_id":"0000942"}}}


id: PBO:0060119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 20","termid":"PBO:0060119"}


id: GO:0030826
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of cGMP.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cGMP biosynthetic process (obsolete GO:0030826)","synonyms":[{"name":"regulation of cGMP anabolism","type":"exact"},{"name":"regulation of cGMP biosynthesis","type":"exact"},{"name":"regulation of cGMP formation","type":"exact"},{"name":"regulation of cGMP synthesis","type":"exact"}],"termid":"GO:0030826"}


id: PR:O13874
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1B3.09c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13874"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized NOC2 family protein C1B3.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B3.09c","synonyms":[{"name":"Spom972h-SPAC1B3.09c","type":"exact"}],"termid":"PR:O13874"}


id: PBO:0066110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS guanyl releasing protein 2","termid":"PBO:0066110"}


id: MONDO:0000649
data:
  {"annotated_genes":["SJAG_03677"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88982],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014937"}]},"cv_name":"mondo","definition":"A malignant neoplasm involving the sensory system","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system cancer","termid":"MONDO:0005872"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03677":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"sensory system cancer","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0060116"],"synonyms":[{"name":"cancer of sensory system","type":"exact"},{"name":"malignant neoplasm of sensory system","type":"exact"},{"name":"malignant sensory system neoplasm","type":"exact"},{"name":"sensory system cancer","type":"exact"}],"termid":"MONDO:0000649","terms_by_termid":{"MONDO:0014937":null},"xrefs":{"Monarch":{"xref_id":"0000649"}}}


id: PBO:0076321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptoporin","termid":"PBO:0076321"}


id: MONDO:0018367
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete clear cell adenocarcinoma of ovary (obsolete MONDO:0018367)","termid":"MONDO:0018367","xrefs":{"Monarch":{"xref_id":"0018367"}}}


id: PBO:0041441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 9 open reading frame 78","termid":"PBO:0041441"}


id: PBO:0066017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"receptor activity modifying protein 3","termid":"PBO:0066017"}


id: MONDO:0017401
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated arrhythmogenic right ventricular dysplasia","termid":"MONDO:0016342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"familial isolated arrhythmogenic ventricular dysplasia, left dominant form","secondary_identifiers":["MEDGEN:1863454","Orphanet:293888","UMLS:C5925017","DOID:0070534","GARD:17345"],"synonyms":[{"name":"familial isolated arrhythmogenic ventricular cardiomyopathy, left dominant form","type":"exact"}],"termid":"MONDO:0017401","xrefs":{"Monarch":{"xref_id":"0017401"}}}


id: PBO:0059955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 41","termid":"PBO:0059955"}


id: MONDO:1011513
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Glaucoma that occurs in Japanese quail.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"glaucoma, non-human animal","termid":"MONDO:1011457"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glaucoma, Japanese quail","secondary_identifiers":["OMIA:000411-93934"],"termid":"MONDO:1011513","xrefs":{"Monarch":{"xref_id":"1011513"}}}


id: PBO:0112847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asynchronous replication autosomal RNA 8-1","termid":"PBO:0112847"}


id: MONDO:0013511
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyanosis, transient neonatal","secondary_identifiers":["OMIM:613977","UMLS:C3151421","MEDGEN:462771"],"synonyms":[{"name":"TNCY","type":"related"},{"name":"cyanosis, transient neonatal","type":"exact"}],"termid":"MONDO:0013511","xrefs":{"Monarch":{"xref_id":"0013511"}}}


id: GO:2000184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of progesterone biosynthetic process.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of steroid biosynthetic process","termid":"GO:0010893"},{"relation_name":"is_a","term_name":"positive regulation of hormone biosynthetic process","termid":"GO:0046886"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of progesterone biosynthetic process","termid":"GO:2000182"},{"relation_name":"positively_regulates","term_name":"progesterone biosynthetic process","termid":"GO:0006701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"positive regulation of progesterone biosynthetic process","synonyms":[{"name":"positive regulation of progesterone anabolism","type":"exact"},{"name":"positive regulation of progesterone biosynthesis","type":"exact"},{"name":"positive regulation of progesterone formation","type":"exact"},{"name":"positive regulation of progesterone synthesis","type":"exact"}],"termid":"GO:2000184"}


id: GO:0018251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The oxidation of the C alpha-C beta bond of peptidyl-tyrosine to form peptidyl-dehydrotyrosine coupled with cyclization of neighboring residues.","definition_xrefs":["RESID:AA0183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-tyrosine modification","termid":"GO:0018212"},{"relation_name":"is_a","term_name":"protein dehydration","termid":"GO:0018249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-tyrosine dehydrogenation","termid":"GO:0018251"}


id: MONDO:0020186
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete eyebrow hypertrophy (obsolete MONDO:0020186)","secondary_identifiers":["Orphanet:98596"],"termid":"MONDO:0020186","xrefs":{"Monarch":{"xref_id":"0020186"}}}


id: GO:0098873
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Propagation of an action potential in a neuron, from its site of initiation (typically the axon hillock) towards the soma.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"action potential propagation","termid":"GO:0098870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuronal action potential back-propagation","termid":"GO:0098873"}


id: PBO:0046039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2 subunit 2 beta pseudogene 7","termid":"PBO:0046039"}


id: MONDO:0011890
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of CMT1, caused by mutations in the EGR2 gene (10q21.1), with a variable severity and age of onset (from infancy to adulthood), that usually presents with gait abnormalities, progressive wasting and weakness of distal limb muscles, with possible later involvement of proximal muscles, foot deformity and severe reduction in nerve conduction velocity. Additional features may include scoliosis, cranial nerve deficits such as diplopia, and bilateral vocal cord paresis.","definition_xrefs":["Orphanet:101084"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 1","termid":"MONDO:0019011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease type 1D","secondary_identifiers":["DOID:0110150","SCTID:719979008","GARD:9189","MESH:C537985","MEDGEN:334709","OMIM:607678","icd11.foundation:2062905967","UMLS:C1843247"],"synonyms":[{"name":"CMT 1D","type":"related"},{"name":"CMT1D","type":"exact"},{"name":"Charcot Marie Tooth disease type 1D","type":"related"},{"name":"Charcot-Marie-Tooth disease type 1 caused by mutation in EGR2","type":"exact"},{"name":"Charcot-Marie-Tooth disease, demyelinating, type 1D","type":"related"},{"name":"Charcot-Marie-Tooth disease, type 1D","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy type 1D","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, type 1D","type":"related"},{"name":"EGR2 Charcot-Marie-Tooth disease type 1","type":"exact"},{"name":"HMSN 1D","type":"related"},{"name":"HMSN ID","type":"exact"},{"name":"HMSN1D","type":"exact"},{"name":"hereditary motor and sensory neuropathy 1D","type":"exact"}],"termid":"MONDO:0011890","xrefs":{"Monarch":{"xref_id":"0011890"}}}


id: MONDO:0859692
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acquired ataxia","termid":"MONDO:0016593"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immune-mediated cerebellar ataxia","secondary_identifiers":["GARD:22494","Orphanet:623638","UMLS:C5680410","MEDGEN:1814462"],"termid":"MONDO:0859692","xrefs":{"Monarch":{"xref_id":"0859692"}}}


id: GO:0009896
data:
  {"annotated_genes":["SJAG_00169","SJAG_01053","SJAG_04249","SJAG_02622","SJAG_02370","SJAG_01625","SJAG_01818","SJAG_00704","SJAG_01716","SJAG_01210","SJAG_03745","SJAG_04825","SJAG_02383","SJAG_03883","SJAG_00966","SJAG_00766","SJAG_04084","SJAG_01944","SJAG_04321","SJAG_00854","SJAG_02540","SJAG_03699","SJAG_02036","SJAG_04824","SJAG_04350","SJAG_00824","SJAG_02213","SJAG_00642","SJAG_04502","SJAG_00285","SJAG_05346","SJAG_01184","SJAG_03597","SJAG_05322","SJAG_00071","SJAG_02239","SJAG_04496","SJAG_03179","SJAG_04682","SJAG_04153","SJAG_02808","SJAG_01544","SJAG_04990","SJAG_01489","SJAG_05000","SJAG_01696","SJAG_04118","SJAG_01521","SJAG_05010","SJAG_04407","SJAG_01131","SJAG_00712","SJAG_01910","SJAG_00759","SJAG_04006","SJAG_03876","SJAG_16457","SJAG_00686","SJAG_01436","SJAG_05694","SJAG_03113","SJAG_00343","SJAG_01191","SJAG_04477","SJAG_04435","SJAG_03157","SJAG_02723","SJAG_04880","SJAG_02765","SJAG_02433","SJAG_04818","SJAG_00391","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[120194],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061158"},{"annotations":[113858,76150,58876,77542,79312,81364],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000290"},{"annotations":[119981],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061157"},{"annotations":[93489],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0060212"},{"annotations":[97732,99056,108301,109295,106224,103902,107092,117308,117747,94060,120182,94890],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071042"},{"annotations":[101751,99955,72338,78358,81389,60449,99868,117007],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000288"},{"annotations":[75423,71983,92596,94315,94412,96145,117523,118467,97325,91604,80543,77224,79454,81491],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000289"},{"annotations":[93490],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0036450"},{"annotations":[92597,119096,67872],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990074"},{"annotations":[90758],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905786"},{"annotations":[99438],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901098"},{"annotations":[116439,111522,81666,100693,113694,101258,75394,75287],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010508"},{"annotations":[70565],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903599"},{"annotations":[108092,77135],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016239"},{"annotations":[108491],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120272"},{"annotations":[91515,106748,74475],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060213"},{"annotations":[68352,68858,62259,69836,70345,66698],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901800"},{"annotations":[113568,110738,104205,118938,108492],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032436"},{"annotations":[101208],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904352"},{"annotations":[91338],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140501"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of substances.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of metabolic process","termid":"GO:0009893"},{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"positively_regulates","term_name":"catabolic 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regulation of catabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"activation of catabolic process","type":"narrow"},{"name":"positive regulation of breakdown","type":"exact"},{"name":"positive regulation of catabolism","type":"exact"},{"name":"positive regulation of degradation","type":"exact"},{"name":"stimulation of catabolic process","type":"narrow"},{"name":"up regulation of catabolic process","type":"exact"},{"name":"up-regulation of catabolic process","type":"exact"},{"name":"upregulation of catabolic process","type":"exact"}],"termid":"GO:0009896","terms_by_termid":{"GO:0000288":null,"GO:0000289":null,"GO:0000290":null,"GO:0010508":null,"GO:0016239":null,"GO:0032436":null,"GO:0036450":null,"GO:0060212":null,"GO:0060213":null,"GO:0061157":null,"GO:0061158":null,"GO:0071042":null,"GO:0120272":null,"GO:0140501":null,"GO:1901098":null,"GO:1901800":null,"GO:1903599":null,"GO:1904352":null,"GO:1905786":null,"GO:1990074":null}}


id: MONDO:0006885
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0006885 (obsolete MONDO:0006885)","termid":"MONDO:0006885","xrefs":{"Monarch":{"xref_id":"0006885"}}}


id: MONDO:0015216
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A diaphragmatic or abdominal wall malformation that is part of a larger syndrome.","definition_xrefs":["MONDO:patterns/syndromic"],"gene_count":0,"genotype_count":0,"name":"obsolete syndromic diaphragmatic or abdominal wall malformation (obsolete MONDO:0015216)","secondary_identifiers":["Orphanet:108979"],"synonyms":[{"name":"syndrome associated with diaphragmatic or abdominal wall malformation","type":"exact"},{"name":"syndromic diaphragmatic or abdominal wall malformation","type":"exact"}],"termid":"MONDO:0015216","xrefs":{"Monarch":{"xref_id":"0015216"}}}


id: MONDO:0015511
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare genetic urogenital disease (obsolete MONDO:0015511)","secondary_identifiers":["Orphanet:156619"],"termid":"MONDO:0015511","xrefs":{"Monarch":{"xref_id":"0015511"}}}


id: PBO:0108566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Alb1","termid":"PBO:0108566"}


id: PBO:0046819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FA core complex associated protein 20","termid":"PBO:0046819"}


id: GO:0002624
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of B cell antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antigen processing and presentation","termid":"GO:0002579"},{"relation_name":"is_a","term_name":"regulation of B cell antigen processing and presentation","termid":"GO:0002622"},{"relation_name":"positively_regulates","term_name":"B cell antigen processing and presentation","termid":"GO:0002450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of B cell antigen processing and presentation","synonyms":[{"name":"activation of B cell antigen processing and presentation","type":"narrow"},{"name":"positive regulation of B lymphocyte antigen processing and presentation","type":"exact"},{"name":"positive regulation of B-cell antigen processing and presentation","type":"exact"},{"name":"positive regulation of B-lymphocyte antigen processing and presentation","type":"exact"},{"name":"stimulation of B cell antigen processing and presentation","type":"narrow"},{"name":"up regulation of B cell antigen processing and presentation","type":"exact"},{"name":"up-regulation of B cell antigen processing and presentation","type":"exact"},{"name":"upregulation of B cell antigen processing and presentation","type":"exact"}],"termid":"GO:0002624"}


id: MONDO:0012169
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited primary ovarian failure","termid":"MONDO:0019852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"premature ovarian failure 3","secondary_identifiers":["DOID:0080860","UMLS:C1837008","MEDGEN:373230","MESH:C563816","OMIM:608996"],"synonyms":[{"name":"Pof3","type":"related"},{"name":"premature ovarian failure 3","type":"exact"},{"name":"premature ovarian failure type 3","type":"exact"}],"termid":"MONDO:0012169","xrefs":{"Monarch":{"xref_id":"0012169"}}}


id: MONDO:0040923
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Latent syphilis when infection was acquired more than twelve months previously.","definition_xrefs":["NCIT:C128371"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tertiary syphilis","termid":"MONDO:0004497"},{"relation_name":"is_a","term_name":"latent syphilis","termid":"MONDO:0005822"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late latent syphilis","secondary_identifiers":["MEDGEN:687555","SCTID:186903006","UMLS:C1260915"],"synonyms":[{"name":"late latent syphilis","type":"exact"}],"termid":"MONDO:0040923","xrefs":{"Monarch":{"xref_id":"0040923"}}}


id: PBO:0049013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycoprotein M6A","termid":"PBO:0049013"}


id: MONDO:0018184
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Gastric linitis plastica (gastric LP) is a malignant, diffuse, infiltrative gastric adenocarcinoma.","definition_xrefs":["Orphanet:36273"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diffuse gastric adenocarcinoma","termid":"MONDO:0005017"},{"relation_name":"is_a","term_name":"cancer-related condition","termid":"MONDO:0045054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"gastric linitis plastica","secondary_identifiers":["NCIT:C3190","GARD:18822","DOID:4023","MESH:D008039","ICDO:8142/3","MEDGEN:928895","UMLS:C4303226","SCTID:721629005"],"synonyms":[{"name":"Borrmann gastric cancer type 4","type":"exact"},{"name":"leather-bottle stomach","type":"exact"},{"name":"linitis plastica","type":"exact"},{"name":"linitis plastica (morphologic abnormality)","type":"exact"},{"name":"linitis plastica of the stomach","type":"exact"}],"termid":"MONDO:0018184","xrefs":{"Monarch":{"xref_id":"0018184"}}}


id: PBO:0053599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 628","termid":"PBO:0053599"}


id: PBO:0050792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxytryptamine receptor 3E","termid":"PBO:0050792"}


id: GO:0015527
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glycerol phosphate(out) + phosphate(in) = glycerol phosphate(in) + phosphate(out).","definition_xrefs":["TC:2.A.1.4.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organophosphate:phosphate antiporter activity","termid":"GO:0015315"},{"relation_name":"is_a","term_name":"organophosphate ester transmembrane transporter activity","termid":"GO:0015605"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"glycerol-phosphate:phosphate antiporter activity","synonyms":[{"name":"glycerol-phosphate:inorganic phosphate antiporter activity","type":"exact"}],"termid":"GO:0015527"}


id: PBO:0071316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27a","termid":"PBO:0071316"}


id: GO:0072551
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: diferuloyl mono-(hydroxyferuloyl) spermidine + NADPH + O2 = monoferuloyl di-(hydroxyferuloyl) spermidine + NADP+ + H2O.","definition_xrefs":["GOC:kad","PMID:19779199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tri-(feruloyl or hydroxyferuloyl) spermidine meta-hydroxylase activity","termid":"GO:0072532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"diferuloyl mono-(hydroxyferuloyl) spermidine meta-hydroxylase activity","termid":"GO:0072551"}


id: PBO:0034303
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_evidence_with_support_from","termid":"PBO:0034303"}


id: PBO:0057505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 623","termid":"PBO:0057505"}


id: PBO:0059540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded tRNA-Gly (GGN)","termid":"PBO:0059540"}


id: PBO:0013781
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by T. reesei dpm1","termid":"PBO:0013781"}


id: PBO:0026937
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_chromosome","termid":"PBO:0026937"}


id: MONDO:0011401
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset autosomal dominant Alzheimer disease","termid":"MONDO:0015140"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0005559","MONDO:0000426"],"is_obsolete":false,"name":"Alzheimer disease without neurofibrillary tangles","secondary_identifiers":["GARD:7190","DOID:0110048","MESH:C566998","MESH:C536599","UMLS:C1858751","OMIM:611155","MEDGEN:346983","OMIM:604154"],"synonyms":[{"name":"AD15","type":"exact"},{"name":"Alzheimer disease 15","type":"exact"},{"name":"Alzheimer disease without neurofibrillary tangles","type":"exact"},{"name":"Alzheimer disease-15","type":"exact"},{"name":"Alzheimer's disease 15","type":"exact"},{"name":"Alzheimer's disease type 15","type":"exact"},{"name":"Alzheimer's disease without neurofibrillary tangles","type":"related"}],"termid":"MONDO:0011401","xrefs":{"Monarch":{"xref_id":"0011401"}}}


id: PBO:0050975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon related developmental regulator 1","termid":"PBO:0050975"}


id: FYPO:0002165
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of polynucleotide 3'-phosphatase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phosphatase activity","termid":"FYPO:0004302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0000661","FYPO:0000654","FYPO:0001985"],"is_obsolete":false,"name":"abnormal polynucleotide 3'-phosphatase activity","termid":"FYPO:0002165"}


id: PBO:0090509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase delta subunit Swp1","termid":"PBO:0090509"}


id: MONDO:0008424
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sella turcica, bridged","secondary_identifiers":["MEDGEN:356654","MESH:C566689","UMLS:C1866959","OMIM:182200"],"synonyms":[{"name":"sella turcica, bridged","type":"exact"}],"termid":"MONDO:0008424","xrefs":{"Monarch":{"xref_id":"0008424"}}}


id: PBO:0001210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP cyclohydrolase II (predicted)","termid":"PBO:0001210"}


id: PBO:0040645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAZ1A antisense RNA 1","termid":"PBO:0040645"}


id: MONDO:0018440
data:
  {"annotated_genes":["SJAG_00516","SJAG_00136"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87114],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009968"},{"annotations":[87926],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011268"}]},"cv_name":"mondo","definition":"Autosomal recessive distal renal tubular acidosis (AR dRTA) is an inherited form of distal renal tubular acidosis (dRTA) characterized by hypokalemic hyperchloremic metabolic acidosis. Deafness often occurs either early or later on in life but may be absent or never be diagnosed.","definition_xrefs":["Orphanet:402041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"distal renal tubular acidosis","termid":"MONDO:0015827"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00136":null,"SJAG_00516":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive distal renal tubular acidosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:351142","UMLS:C1864498","GARD:4666"],"synonyms":[{"name":"AR dRTA","type":"exact"},{"name":"autosomal recessive distal RTA","type":"exact"},{"name":"autosomal recessive distal renal tubular acidosis (disease)","type":"exact"},{"name":"distal renal tubular acidosis (disease), autosomal recessive","type":"exact"}],"termid":"MONDO:0018440","terms_by_termid":{"MONDO:0009968":null,"MONDO:0011268":null},"xrefs":{"Monarch":{"xref_id":"0018440"}}}


id: FYPO:0004571
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to hydrogen peroxide is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during cellular response to oxidative stress","termid":"FYPO:0001279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"increased RNA level during cellular response to hydrogen peroxide","synonyms":[{"name":"increased RNA accumulation during cellular response to hydrogen peroxide","type":"related"},{"name":"increased RNA level during cellular response to H2O2","type":"exact"},{"name":"increased RNA level during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"increased RNA level during cellular response to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"increased mRNA level during cellular response to hydrogen peroxide","type":"narrow"},{"name":"increased transcript level during cellular response to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0004571"}


id: PBO:0090399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMN complex subunit Smn1/Gem1","termid":"PBO:0090399"}


id: PBO:0073398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET pseudogene 1","termid":"PBO:0073398"}


id: MONDO:0003179
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lacrimal gland adenoid cystic carcinoma (obsolete MONDO:0003179)","termid":"MONDO:0003179","xrefs":{"Monarch":{"xref_id":"0003179"}}}


id: MONDO:0010983
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dystonia characterized by autosomal dominant inheritance of paroxysmal choreoathetosis and progressive spastic paraplegia, episodes are often precipitated by alcohol, fatigue, or emotional stress that has material basis in heterozygous mutation in the SLC2A1 gene on chromosome 1p34.","definition_xrefs":["DOID:0090044"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paroxysmal dystonia","termid":"MONDO:0016058"},{"relation_name":"is_a","term_name":"disorder of carbohydrate transmembrane transport and absorption","termid":"MONDO:0017706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0003441","MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"dystonia 9","secondary_identifiers":["UMLS:C1832855","OMIM:601042","GARD:16656","MEDGEN:371427","NANDO:1200520","MESH:C563401","SCTID:715564000","Orphanet:53583"],"synonyms":[{"name":"Cse choreoathetosis, paroxysmal, with episodic ataxia","type":"related"},{"name":"DYT9","type":"exact"},{"name":"choreoathetosis, kinesigenic, with episodic ataxia and spasticity","type":"related"},{"name":"choreoathetosis/spasticity, episodic","type":"related"},{"name":"dystonia 9","type":"exact"},{"name":"dystonia type 9","type":"exact"},{"name":"episodic choreoathetosis/spasticity","type":"exact"},{"name":"paroxysmal dystonic choreathetosis with episodic ataxia and spasticity","type":"related"}],"termid":"MONDO:0010983","xrefs":{"Monarch":{"xref_id":"0010983"}}}


id: MONDO:0008146
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteogenesis imperfecta type I is a mild type of osteogenesis imperfecta (OI), a genetic disorder characterized by increased bone fragility, low bone mass and susceptibility to bone fractures.","definition_xrefs":["Orphanet:216796"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteogenesis imperfecta and a reduction of bone mineral density.","termid":"MONDO:0800064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"osteogenesis imperfecta type 1","secondary_identifiers":["icd11.foundation:1897905410","MEDGEN:9799","UMLS:C0023931","DOID:0110334","NCIT:C99003","GARD:8694","OMIM:166200","SCTID:385482004"],"synonyms":[{"name":"Adair-Dighton syndrome","type":"exact"},{"name":"COL1A1-related osteogenesis imperfecta","type":"exact"},{"name":"OI type 1","type":"exact"},{"name":"OI, type 1","type":"related"},{"name":"OI1","type":"exact"},{"name":"Van der Hoeve syndrome","type":"exact"},{"name":"classic non-deforming OI with blue sclerae","type":"related"},{"name":"mild osteogenesis imperfecta","type":"exact"},{"name":"non-deforming osteogenesis imperfecta","type":"exact"},{"name":"osteogenesis imperfecta tarda","type":"related"},{"name":"osteogenesis imperfecta type 1","type":"exact"},{"name":"osteogenesis imperfecta type I","type":"exact"},{"name":"osteogenesis imperfecta with blue sclerae","type":"related"},{"name":"osteogenesis imperfecta, type 1","type":"related"},{"name":"osteogenesis imperfecta, type I","type":"related"}],"termid":"MONDO:0008146","xrefs":{"Monarch":{"xref_id":"0008146"}}}


id: GO:0070801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of conidiophore stalk development, a process that leads to the formation of a conidiophore stalk. The conidiophore stalk is part of a specialized hypha that extends aerially from the growth substrate and supports structures from which conidia, or asexual spores, develop.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of conidiophore development","termid":"GO:0070795"},{"relation_name":"is_a","term_name":"regulation of conidiophore stalk development","termid":"GO:0070799"},{"relation_name":"positively_regulates","term_name":"conidiophore stalk development","termid":"GO:0070788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of conidiophore stalk development","termid":"GO:0070801"}


id: PBO:0053884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1164","termid":"PBO:0053884"}


id: PBO:0044480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 24 subfamily A member 1","termid":"PBO:0044480"}


id: PBO:0026794
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_nuclear_periphery","termid":"PBO:0026794"}


id: PBO:0068496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 80, pseudogene","termid":"PBO:0068496"}


id: MONDO:0014527
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"progeroid syndrome","termid":"MONDO:0015333"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progeroid features-hepatocellular carcinoma predisposition syndrome","secondary_identifiers":["OMIM:616200","UMLS:C4015461","DOID:0111264","GARD:17722","MEDGEN:863898","Orphanet:435953"],"synonyms":[{"name":"RJALS","type":"related"},{"name":"RUIJS-Aalfs syndrome","type":"related"},{"name":"Ruijs-Aalfs syndrome","type":"exact"}],"termid":"MONDO:0014527","xrefs":{"Monarch":{"xref_id":"0014527"}}}


id: MONDO:0000837
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease that has its basis in the disruption of bone resorption. Bone resorption is a process in which specialized cells known as osteoclasts degrade the organic and inorganic portions of bone, and endocytose and transport the degradation products.","direct_ancestors":[{"relation_name":"is_a","term_name":"bone remodeling disease","termid":"MONDO:0000833"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone resorption disease","secondary_identifiers":["MEDGEN:14188","DOID:0080011","MESH:D001862","UMLS:C0005974"],"termid":"MONDO:0000837","xrefs":{"Monarch":{"xref_id":"0000837"}}}


id: PBO:0004440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic threonine-tRNA ligase Trs1 (predicted)","termid":"PBO:0004440"}


id: PBO:0005038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fun thirty related protein Fft2 (predicted)","termid":"PBO:0005038"}


id: PBO:0088378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U5 snRNP subunit Snu40","termid":"PBO:0088378"}


id: GO:0030243
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cellulose, a linear beta1-4 glucan of molecular mass 50-400 kDa with the pyranose units in the -4C1 conformation.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucan metabolic process","termid":"GO:0051273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"cellulose metabolic process","secondary_identifiers":["GO:0016177"],"synonyms":[{"name":"cellulose metabolism","type":"exact"}],"termid":"GO:0030243"}


id: PR:O59729
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC3E7.09 gene.","definition_xrefs":["UniProtKB:O59729","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein slp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3E7.09","synonyms":[{"name":"SUN-like protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPBC3E7.09","type":"exact"}],"termid":"PR:O59729"}


id: FYPO:0008115
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is increased relative to normal in a medium containing sorbitol as the carbon source.","definition_xrefs":["PMID:15537393"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002058","FYPO:0000139","FYPO:0002057","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"increased cell population growth on sorbitol carbon source","termid":"FYPO:0008115"}


id: GO:1904678
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an alpha-aminoacyl-tRNA.","definition_xrefs":["GO_REF:0000067","GOC:TermGenie","ISBN:155581073X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003723","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"alpha-aminoacyl-tRNA binding","synonyms":[{"name":"aminoacyl-tRNA binding","type":"related"}],"termid":"GO:1904678"}


id: MONDO:0001681
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cystits which involves inflammation and formation of a dense fibrous false membrane on the mucous membrane of the bladder.","definition_xrefs":["DOID:13306","PMID:18889690"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cystitis","termid":"MONDO:0006032"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphtheritic cystitis","secondary_identifiers":["ICD10CM:A36.85","ICD9:032.84","SCTID:48278001","icd11.foundation:943460530","MEDGEN:509093","UMLS:C0152954"],"termid":"MONDO:0001681","xrefs":{"Monarch":{"xref_id":"0001681"}}}


id: PBO:0074620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 20","termid":"PBO:0074620"}


id: MONDO:0100171
data:
  {"annotated_genes":["SJAG_00379"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89148],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014494"}]},"cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing psoriasis.","definition_xrefs":["MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00379":null},"genotype_count":0,"is_obsolete":false,"name":"psoriasis, susceptibility to","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0100171","terms_by_termid":{"MONDO:0014494":null},"xrefs":{"Monarch":{"xref_id":"0100171"}}}


id: GO:0043763
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and modulates the activity of UTP:glucose-1-phosphate uridylyltransferase.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme regulator activity","termid":"GO:0030234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0030234","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"UTP:glucose-1-phosphate uridylyltransferase regulator activity","synonyms":[{"name":"UDP-glucose diphosphorylase regulator activity","type":"exact"},{"name":"UDP-glucose pyrophosphorylase regulator activity","type":"exact"},{"name":"glucose-1-phosphate uridylyltransferase regulator activity","type":"exact"}],"termid":"GO:0043763"}


id: PBO:0047063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 120C","termid":"PBO:0047063"}


id: MONDO:0958303
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A renal cell carcinoma with MiT translocations that is characterized by a TFE3 or TFEB-rearranged renal cell carcinoma that occurs during childhood.","definition_xrefs":["DOID:0081416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MIT family translocation renal cell carcinoma","termid":"MONDO:0017886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0004992"],"is_obsolete":false,"name":"childhood renal cell carcinoma with MiT translocations","secondary_identifiers":["MEDGEN:1817233","UMLS:C5708328"],"termid":"MONDO:0958303","xrefs":{"Monarch":{"xref_id":"0958303"}}}


id: GO:0070941
data:
  {"annotated_genes":["SJAG_02626","SJAG_04227","SJAG_02707","SJAG_02338"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71540,73092,105694,119707],"is_not":false,"summary":null,"term":"GO:0070941"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an eisosome, a cell part that is composed of the eisosome membrane and eisosome filaments. The eisosome membrane, also called the MCC domain, is a furrow-like plasma membrane sub-domain with associated integral transmembrane proteins. The eisosome filaments form a scaffolding lattice on the cytoplasmic face of the membrane.","definition_xrefs":["GOC:mah","GOC:al","GOC:jp","PMID:19564405"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02338":null,"SJAG_02626":null,"SJAG_02707":null,"SJAG_04227":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"eisosome assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0070941","terms_by_termid":{"GO:0070941":null}}


id: PBO:0045718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F transcription factor 3 pseudogene 2","termid":"PBO:0045718"}


id: PBO:0045074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLG associated protein 2","termid":"PBO:0045074"}


id: PBO:0001011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PXA domain protein Pxa1","termid":"PBO:0001011"}


id: PR:Q10301
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC22H10.08 gene.","definition_xrefs":["UniProtKB:Q10301","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0652 protein C22H10.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22H10.08","synonyms":[{"name":"Spom972h-SPAC22H10.08","type":"exact"}],"termid":"PR:Q10301"}


id: MONDO:0004731
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A broad classification of disorders which includes 6 subtypes (primary central sleep apnea, central sleep apnea due to Cheyne-Stokes breathing pattern, central sleep apnea due to medical condition not Cheyne-Stokes, central sleep apnea due to high-altitude periodic breathing, central sleep apnea due to drug or substance and primary sleep apnea of infancy) that are each characterized by interruptions in breathing while asleep. It is caused by improper signaling from the brainstem to respiratory muscles and is triggered by either hypoventilation or hyperventilation. In adults, this disorder may arise following a stroke, congestive heart failure, trauma, infection or the use of narcotic medications. It is more common in older males and may present as a co-morbid condition to obesity. Clinical signs include snoring, insomnia or hypersomnia, difficulty concentrating and fatigue. Recurrent episodes of hypoxia/hypoxemia have long-term detrimental effects on cardiovascular health.","definition_xrefs":["NCIT:C27169"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"sleep apnea syndrome","termid":"MONDO:0005296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central sleep apnea syndrome","secondary_identifiers":["MEDGEN:854402","MESH:D020182","UMLS:C3887547","ICD9:327.21","SCTID:27405005","DOID:9220"],"synonyms":[{"name":"Apneas, central","type":"related"},{"name":"Apneas, central sleep","type":"related"},{"name":"Breathings, central sleep-disordered","type":"related"},{"name":"alveolar hypoventilation, central","type":"related"},{"name":"alveolar hypoventilations, central","type":"related"},{"name":"apnea, central","type":"related"},{"name":"apnea, central sleep","type":"related"},{"name":"apnea, sleep, central","type":"related"},{"name":"breathing, central sleep-disordered","type":"related"},{"name":"central Apneas","type":"related"},{"name":"central alveolar hypoventilation","type":"related"},{"name":"central alveolar hypoventilation syndrome","type":"related"},{"name":"central apnea","type":"related"},{"name":"central sleep Apneas","type":"related"},{"name":"central sleep apnea","type":"related"},{"name":"central sleep apnea syndrome","type":"exact"},{"name":"central sleep apnea, primary","type":"narrow"},{"name":"central sleep apnea, secondary","type":"related"},{"name":"central sleep disordered breathing","type":"related"},{"name":"central sleep-disordered Breathings","type":"related"},{"name":"central sleep-disordered breathing","type":"related"},{"name":"hypoventilation, central alveolar","type":"related"},{"name":"hypoventilations, central alveolar","type":"related"},{"name":"ondine syndrome","type":"related"},{"name":"primary central sleep apnea","type":"narrow"},{"name":"secondary central sleep apnea","type":"narrow"},{"name":"sleep Apneas, central","type":"related"},{"name":"sleep apnea, lethal central","type":"related"},{"name":"sleep disordered breathing, central","type":"related"},{"name":"sleep-disordered Breathings, central","type":"related"},{"name":"sleep-disordered breathing, central","type":"related"}],"termid":"MONDO:0004731","xrefs":{"Monarch":{"xref_id":"0004731"}}}


id: MONDO:0013270
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Rett syndrome, congenital variant (obsolete MONDO:0013270)","secondary_identifiers":["GARD:15664"],"termid":"MONDO:0013270","xrefs":{"Monarch":{"xref_id":"0013270"}}}


id: GO:0140810
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + histone H1 L-arginyl (position 54)= histone H1 L-citrullyl (position 54) + NH4+, resulting in histone H1 citrullination at position 54.","definition_xrefs":["PMID:24463520"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone arginine deiminase activity","termid":"GO:0140794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0003674","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"histone H1R54 arginine deiminase activity","synonyms":[{"name":"H1-R54 citrullination","type":"exact"},{"name":"histone H1-R54 deiminase activity","type":"exact"},{"name":"histone-arginine deiminase activity (H1-R54 specific)","type":"exact"}],"termid":"GO:0140810"}


id: PBO:0039275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG1 like 3, pseudogene","termid":"PBO:0039275"}


id: PBO:0087150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-dependent DExD/H-box ATPase; required for activation of spliceosome before first transesterification step in RNA splicing; implicated in rearranging and proofreading snRNA structure in catalytic activation of spliceosome; ortholog of human protein DHX16","termid":"PBO:0087150"}


id: SO:0002257
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Cytologically observable heterochromatic regions of chromosomes away from centromeres that contain predominatly large tandem repeats and retrotransposons.","definition_xrefs":["PMID:6439888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"repeat_region","termid":"SO:0000657"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"knob","synonyms":[{"name":"Heterochromatin Knob","type":"exact"}],"termid":"SO:0002257"}


id: GO:0016271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A permanent cessation of all vital functions of a tissue.","definition_xrefs":["GOC:dph","GOC:mtg_apoptosis"],"gene_count":0,"genotype_count":0,"name":"obsolete tissue death (obsolete GO:0016271)","termid":"GO:0016271"}


id: GO:0009386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Translational attenuation is a regulatory mechanism analogous to ribosome-mediated transcriptional attenuation. The system requires the presence of a short ORF, called a leader peptide, encoded in the mRNA upstream of the ribosome-binding site and start codon of the gene whose translation is to be regulated. Certain conditions, such as presence of the antibiotic tetracycline in bacteria or amino acid starvation, may cause slowing or stalling of the ribosome translating the leader peptide. The stalled ribosome masks a region of the mRNA and affects which of two alternative mRNA folded structures will form, therefore controlling whether or not a ribosome will bind and initiate translation of the downstream gene. Translational attenuation is analogous to ribosome-mediated transcriptional attenuation, in which mRNA remodeling caused by ribosome stalling regulates transcriptional termination rather than translational initiation.","definition_xrefs":["PMID:15694341","PMID:15805513"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translation","termid":"GO:0006417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"translational attenuation","termid":"GO:0009386"}


id: GO:0098909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination in a cardiac muscle cell contributing to the regulation of its contraction.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardiac muscle cell action potential","termid":"GO:0098901"},{"relation_name":"part_of","term_name":"regulation of cardiac muscle cell contraction","termid":"GO:0086004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac muscle cell action potential involved in regulation of contraction","termid":"GO:0098909"}


id: GO:0000480
data:
  {"annotated_genes":["SJAG_02250","SJAG_04224","SJAG_04524"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72089,74652,79705],"is_not":false,"summary":null,"term":"GO:0000480"}]},"cv_name":"biological_process","definition":"Endonucleolytic cleavage within the 5'-External Transcribed Spacer (ETS) of a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, the 5.8S rRNA, and the Large Subunit (LSU) rRNA in that order from 5' to 3' along the primary transcript. Endonucleolytic cleavage within the 5'-ETS of the pre-RNA is conserved as one of the early steps of rRNA processing in all eukaryotes, but the specific position of cleavage is variable.","definition_xrefs":["PMID:10690410","PMID:15282326","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000479"},{"relation_name":"part_of","term_name":"maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000462"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02250":null,"SJAG_04224":null,"SJAG_04524":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0010467","GO:0042254"],"is_obsolete":false,"name":"endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"endonucleolytic cleavage at A-prime","type":"narrow"},{"name":"endonucleolytic cleavage at A0","type":"narrow"}],"termid":"GO:0000480","terms_by_termid":{"GO:0000480":null}}


id: FYPO:0008406
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the endoplasmic reticulum is abnorma and some of the protein is present in the cytoplasmic aggregates instead.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to endoplasmic reticulum during vegetative growth","termid":"FYPO:0003777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"abnormal protein localization to endoplasmic reticulum with cytoplasmic aggregation","termid":"FYPO:0008406"}


id: MOD:00853
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a carboxamido group with a carboxyl group labeled with two (18)O.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(18)O labeled deamidated residue","termid":"MOD:00851"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2x(18)O labeled deamidated residue","termid":"MOD:00853"}


id: MONDO:1012166
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitral valve disease, non-human animal","termid":"MONDO:1011643"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitral valve disease, dog","secondary_identifiers":["OMIA:000654-9615"],"termid":"MONDO:1012166","xrefs":{"Monarch":{"xref_id":"1012166"}}}


id: PBO:0048101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FTO intronic transcript 1","termid":"PBO:0048101"}


id: PBO:0042965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 3","termid":"PBO:0042965"}


id: GO:0048717
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the anterior cibarial plate are generated and organized.","definition_xrefs":["GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"clypeo-labral disc morphogenesis","termid":"GO:0007453"},{"relation_name":"part_of","term_name":"anterior cibarial plate development","termid":"GO:0048722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior cibarial plate morphogenesis","termid":"GO:0048717"}


id: PBO:0062858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otopetrin 3","termid":"PBO:0062858"}


id: GO:0071037
data:
  {"annotated_genes":["SJAG_03984","SJAG_03745"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72014,72359],"is_not":false,"summary":null,"term":"GO:0071037"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways occurring in the nucleus and resulting in the breakdown of a small nuclear RNA (snRNA) molecule, initiated by the enzymatic addition of a sequence of adenylyl residues (polyadenylation) at the 3' end the target snRNA.","definition_xrefs":["GOC:dgf","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA catabolic process","termid":"GO:0016076"},{"relation_name":"is_a","term_name":"nuclear RNA surveillance","termid":"GO:0071027"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03745":null,"SJAG_03984":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016073"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016073","GO:0008150"],"is_obsolete":false,"name":"nuclear polyadenylation-dependent snRNA catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"nuclear poly(A)-dependent snRNA catabolic process","type":"related"}],"termid":"GO:0071037","terms_by_termid":{"GO:0071037":null}}


id: GO:0052447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism modulates the frequency, rate or extent of the ethylene-mediated defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of symbiont ethylene-mediated defense response (obsolete GO:0052447)","synonyms":[{"name":"modulation by organism of symbiont ethylene-mediated defense response","type":"exact"}],"termid":"GO:0052447"}


id: GO:0051016
data:
  {"annotated_genes":["SJAG_02700","SJAG_01894","SJAG_01993","SJAG_00279"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77285,80885,81936,94138],"is_not":false,"summary":null,"term":"GO:0051016"}]},"cv_name":"biological_process","definition":"The binding of a protein or protein complex to the barbed (or plus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits.","definition_xrefs":["ISBN:071673706X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament capping","termid":"GO:0051693"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02700":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0030036","GO:0007010","GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"barbed-end actin filament capping","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"barbed-end F-actin capping activity","type":"exact"},{"name":"barbed-end actin capping activity","type":"exact"},{"name":"plus-end F-actin capping activity","type":"exact"},{"name":"plus-end actin filament capping activity","type":"exact"}],"termid":"GO:0051016","terms_by_termid":{"GO:0051016":null}}


id: MONDO:0006977
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign testicular cyst that is located in the epididymis, and which contains serous fluid, lymphocytes, spermatozoa, and debris.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male reproductive system disorder","termid":"MONDO:0003150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatocele","secondary_identifiers":["icd11.foundation:1907004531","DOID:11997","MedDRA:10041490","MEDGEN:20857","SCTID:49263001","ICD10CM:N43.4","MESH:D013088","EFO:1001189","ICD9:608.1","UMLS:C0037859"],"termid":"MONDO:0006977","xrefs":{"Monarch":{"xref_id":"0006977"}}}


id: PBO:0030760
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_response_to_silver_ion","termid":"PBO:0030760"}


id: PBO:0048239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G antigen 8","termid":"PBO:0048239"}


id: GO:0001757
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which individual somites establish identity during embryogenesis.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"segment specification","termid":"GO:0007379"},{"relation_name":"is_a","term_name":"embryonic pattern specification","termid":"GO:0009880"},{"relation_name":"part_of","term_name":"somitogenesis","termid":"GO:0001756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somite specification","termid":"GO:0001757"}


id: MONDO:0021510
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the prostate gland.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign male reproductive system neoplasm","termid":"MONDO:0000625"},{"relation_name":"is_a","term_name":"prostate neoplasm","termid":"MONDO:0021259"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of prostate","secondary_identifiers":["SCTID:92308005","UMLS:C0154009","icd11.foundation:1144614287","ICD9:222.2","ICD10CM:D29.1","MEDGEN:57577","NCIT:C3613"],"synonyms":[{"name":"benign neoplasm of the prostate","type":"exact"},{"name":"benign prostate neoplasm","type":"exact"},{"name":"benign prostate tumor","type":"exact"},{"name":"benign prostate tumour","type":"exact"},{"name":"benign prostatic neoplasm","type":"exact"},{"name":"benign tumor of prostate","type":"exact"},{"name":"benign tumor of the prostate","type":"exact"},{"name":"benign tumour of prostate","type":"exact"},{"name":"benign tumour of the prostate","type":"exact"},{"name":"prostate gland benign neoplasm","type":"exact"}],"termid":"MONDO:0021510","xrefs":{"Monarch":{"xref_id":"0021510"}}}


id: MONDO:0016513
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. This term refers to a group of diseases characterized by alpha-thalassemia and an associated disorder. Three conditions are included in this group: alpha thalassemia - X-linked intellectual deficit (or ATR-X syndrome), alpha-thalassemia-intellectual deficit syndrome (or ATR-16 syndrome) and alpha-thalassemia-myelodysplastic disease (or ATMDS).*","definition_xrefs":["Orphanet:232288"],"gene_count":0,"genotype_count":0,"name":"obsolete alpha-thalassemia-related diseases (obsolete MONDO:0016513)","secondary_identifiers":["ICD10CM:D56.0"],"termid":"MONDO:0016513","xrefs":{"Monarch":{"xref_id":"0016513"}}}


id: PR:Q9USH5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pwi1 gene.","definition_xrefs":["UniProtKB:Q9USH5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PWI domain-containing protein C825.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC825.05c","synonyms":[{"name":"Spom972h-pwi1","type":"exact"}],"termid":"PR:Q9USH5"}


id: GO:0051251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lymphocyte activation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte activation","termid":"GO:0002696"},{"relation_name":"is_a","term_name":"regulation of lymphocyte activation","termid":"GO:0051249"},{"relation_name":"positively_regulates","term_name":"lymphocyte activation","termid":"GO:0046649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lymphocyte activation","synonyms":[{"name":"activation of lymphocyte activation","type":"narrow"},{"name":"stimulation of lymphocyte activation","type":"narrow"},{"name":"up regulation of lymphocyte activation","type":"exact"},{"name":"up-regulation of lymphocyte activation","type":"exact"},{"name":"upregulation of lymphocyte activation","type":"exact"}],"termid":"GO:0051251"}


id: PBO:0030710
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_chromatin_binding","termid":"PBO:0030710"}


id: GO:0140777
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A molecular function that involves direct binding to one of the subunits of a protein-containing complex, thus preventing an interaction with a factor that would promote dissociation of the complex.","definition_xrefs":["PMID:34040253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_function","termid":"GO:0003674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"protein-containing complex stabilizing activity","termid":"GO:0140777"}


id: PBO:0059927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 13","termid":"PBO:0059927"}


id: PBO:0000942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA ligase Cdc17","termid":"PBO:0000942"}


id: PBO:0082623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of both the Rpd3S and Rpd3L histone deacetylase complexes; negative regulator of meiosis; required for repression of a subset of meiotic genes during vegetative growth, binding of histone deacetylase Rpd3p required for activity, contains a NEE box and a WD repeat motif; homologous with Wtm1p; UME1 has a paralog, WTM2, that arose from the whole genome duplication","termid":"PBO:0082623"}


id: GO:0160002
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein upon ADP-ribosylation of the target protein.","definition_xrefs":["PMID:26673700"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modification-dependent protein binding","termid":"GO:0140030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"ADP-D-ribose modification-dependent protein binding","termid":"GO:0160002"}


id: GO:0043558
data:
  {"annotated_genes":["SJAG_02592","SJAG_01942","SJAG_04873","SJAG_04383","SJAG_00169","SJAG_00690","SJAG_02072","SJAG_03869","SJAG_00786"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101149,111520,117480,76982,71679,96179],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990625"},{"annotations":[97042,105783,105151],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990611"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of translation initiation, as a result of a stimulus indicating the organism is under stress.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translational initiation","termid":"GO:0006446"},{"relation_name":"is_a","term_name":"regulation of translation in response to stress","termid":"GO:0043555"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00690":null,"SJAG_00786":null,"SJAG_01942":null,"SJAG_02072":null,"SJAG_02592":null,"SJAG_03869":null,"SJAG_04383":null,"SJAG_04873":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of translational initiation in response to stress","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of translation initiation in response to stress","type":"exact"}],"termid":"GO:0043558","terms_by_termid":{"GO:1990611":null,"GO:1990625":null}}


id: MONDO:0017057
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hereditary thrombocytopenia with normal platelets (obsolete MONDO:0017057)","secondary_identifiers":["Orphanet:268322"],"termid":"MONDO:0017057","xrefs":{"Monarch":{"xref_id":"0017057"}}}


id: PBO:0034728
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds with high affinity to mammalian-type 5'-TTAGGG-3' telomeric repeats, and with very low affinity to less stringently conserved S. pombe telomeric repeats","termid":"PBO:0034728"}


id: GO:2001249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of ammonia assimilation cycle.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nitrogen utilization","termid":"GO:0045847"},{"relation_name":"is_a","term_name":"negative regulation of glutamate metabolic process","termid":"GO:2000212"},{"relation_name":"is_a","term_name":"regulation of ammonia assimilation cycle","termid":"GO:2001248"},{"relation_name":"negatively_regulates","term_name":"ammonia assimilation cycle","termid":"GO:0019676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"negative regulation of ammonia assimilation cycle","synonyms":[{"name":"negative regulation of glutamate metabolic process via glutamine and ammonia","type":"exact"},{"name":"negative regulation of glutamate metabolism via glutamine and ammonia","type":"exact"}],"termid":"GO:2001249"}


id: GO:0070667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of mast cell proliferation.","definition_xrefs":["GOC:mah","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte proliferation","termid":"GO:0070664"},{"relation_name":"is_a","term_name":"regulation of mast cell proliferation","termid":"GO:0070666"},{"relation_name":"negatively_regulates","term_name":"mast cell proliferation","termid":"GO:0070662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mast cell proliferation","synonyms":[{"name":"down regulation of mast cell proliferation","type":"exact"},{"name":"down-regulation of mast cell proliferation","type":"exact"},{"name":"downregulation of mast cell proliferation","type":"exact"},{"name":"inhibition of mast cell proliferation","type":"narrow"}],"termid":"GO:0070667"}


id: PBO:0001383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Polo kinase Plo1","termid":"PBO:0001383"}


id: MONDO:0016786
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Partial hydatiform mole is a type of hydatiform mole characterized by abnormal hyperplastic trophoblasts and hydropic villi due to fertilization of a normal ovocyte by two spermatozoa or one abnormal spermatozoon (allowing for some fetal development), and that manifests with vaginal bleeding accompanied by nausea and frequent vomiting, hyperemesis gravidarum, hyperthyroidism and risk of spontaneous miscarriage.","definition_xrefs":["Orphanet:254693"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydatidiform mole","termid":"MONDO:0006248"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial hydatidiform mole","secondary_identifiers":["ICDO:9103/0","GARD:20749","MEDGEN:87258","NCIT:C4293","UMLS:C0334529","icd11.foundation:714020909","SCTID:237250000","ONCOTREE:PHM"],"synonyms":[{"name":"PHM","type":"related"},{"name":"incomplete hydatid Mole","type":"exact"},{"name":"incomplete hydatidiform mole","type":"exact"},{"name":"incomplete molar pregnancy","type":"exact"},{"name":"partial Mole","type":"exact"},{"name":"partial hydatid Mole","type":"exact"},{"name":"partial molar pregnancy","type":"exact"}],"termid":"MONDO:0016786","xrefs":{"Monarch":{"xref_id":"0016786"}}}


id: PBO:0081838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 773","termid":"PBO:0081838"}


id: PBO:0041349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 3 open reading frame 85","termid":"PBO:0041349"}


id: PBO:0065118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRKCQ antisense RNA 1","termid":"PBO:0065118"}


id: GO:0009563
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an uncellularized nucleus cellularizes and acquires the specialized features of a synergid cell.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"megagametogenesis","termid":"GO:0009561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"synergid differentiation","synonyms":[{"name":"synergid cell differentiation","type":"exact"}],"termid":"GO:0009563"}


id: PBO:0048795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GNAO1 antisense RNA 1","termid":"PBO:0048795"}


id: GO:1904074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of trophectodermal cell proliferation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24508636"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"is_a","term_name":"regulation of trophectodermal cell proliferation","termid":"GO:1904073"},{"relation_name":"negatively_regulates","term_name":"trophectodermal cell proliferation","termid":"GO:0001834"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of trophectodermal cell proliferation","synonyms":[{"name":"down regulation of trophectoderm cell proliferation","type":"exact"},{"name":"down regulation of trophectodermal cell proliferation","type":"exact"},{"name":"down-regulation of trophectoderm cell proliferation","type":"exact"},{"name":"down-regulation of trophectodermal cell proliferation","type":"exact"},{"name":"downregulation of trophectoderm cell proliferation","type":"exact"},{"name":"downregulation of trophectodermal cell proliferation","type":"exact"},{"name":"inhibition of trophectoderm cell proliferation","type":"narrow"},{"name":"inhibition of trophectodermal cell proliferation","type":"narrow"},{"name":"negative regulation of trophectoderm cell proliferation","type":"exact"}],"termid":"GO:1904074"}


id: PBO:0058265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4643","termid":"PBO:0058265"}


id: PBO:0060761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B4 pseudogene 5","termid":"PBO:0060761"}


id: MONDO:0011589
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"microphthalmia, isolated, with coloboma","termid":"MONDO:0000170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"microphthalmia with coloboma 2","secondary_identifiers":["MESH:C565300","UMLS:C1854018","MEDGEN:343030","OMIM:605738","GARD:15385"],"synonyms":[{"name":"MCOPCB2","type":"exact"},{"name":"microphthalmia, colobomatous, isolated 2","type":"related"},{"name":"microphthalmia, isolated, with coloboma 2","type":"related"}],"termid":"MONDO:0011589","xrefs":{"Monarch":{"xref_id":"0011589"}}}


id: PBO:0004924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic nuclear protein implicated in meiotic chromosome segregation","termid":"PBO:0004924"}


id: PBO:0080606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 43","termid":"PBO:0080606"}


id: PBO:0043894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine rich protein 1 pseudogene 1","termid":"PBO:0043894"}


id: GO:0035650
data:
  {"annotated_genes":["SJAG_01381"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101525],"is_not":false,"summary":null,"term":"GO:0035650"}]},"cv_name":"molecular_function","definition":"Binding to an AP-1 adaptor complex. The AP-1 adaptor complex is a heterotetrameric AP-type membrane coat adaptor complex that consists of beta1, gamma, mu1 and sigma1 subunits and links clathrin to the membrane surface of a vesicle. In at least humans, the AP-1 complex can be heterogeneric due to the existence of multiple subunit isoforms encoded by different genes (gamma1 and gamma2, mu1A and mu1B, and sigma1A, sigma1B and sigma1C).","definition_xrefs":["PMID:21097499"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01381":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"AP-1 adaptor complex binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0035650","terms_by_termid":{"GO:0035650":null}}


id: PBO:0031102
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_salt_stress","termid":"PBO:0031102"}


id: PBO:0001320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"helix-hairpin-helix","termid":"PBO:0001320"}


id: PBO:0061926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily I member 1","termid":"PBO:0061926"}


id: PBO:0070536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 2","termid":"PBO:0070536"}


id: PBO:0042756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 19","termid":"PBO:0042756"}


id: GO:0000159
data:
  {"annotated_genes":["SJAG_03353","SJAG_00229","SJAG_01270","SJAG_03681","SJAG_00526","SJAG_00600","SJAG_00078"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[63628,66097,72844,73456,77577,79993,106322],"is_not":false,"summary":null,"term":"GO:0000159"}]},"cv_name":"cellular_component","definition":"A protein complex that has protein serine/threonine phosphatase activity that is polycation-stimulated (PCS), being directly stimulated by protamine, polylysine, or histone H1; it constitutes a subclass of several enzymes activated by different histones and polylysine, and consists of catalytic, scaffolding, and regulatory subunits. The catalytic and scaffolding subunits form the core enzyme, and the holoenzyme also includes the regulatory subunit.","definition_xrefs":["PMID:17245430","GOC:mah","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine phosphatase complex","termid":"GO:0008287"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00078":null,"SJAG_00229":null,"SJAG_00526":null,"SJAG_00600":null,"SJAG_01270":null,"SJAG_03353":null,"SJAG_03681":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"protein phosphatase type 2A complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"PP2A complex","type":"exact"},{"name":"PP2A-pi","type":"narrow"},{"name":"PP2a-protector","type":"narrow"},{"name":"protein phosphatase 2 complex","type":"related"}],"termid":"GO:0000159","terms_by_termid":{"GO:0000159":null}}


id: GO:0046429
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate + H2O + 2 oxidized ferredoxin = 2-C-methyl-D-erythritol 2,4-cyclodiphosphate + 2 reduced ferredoxin.","definition_xrefs":["EC:1.17.7.1","PMID:11752431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor","termid":"GO:0052592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin)","secondary_identifiers":["KEGG_REACTION:R08689","MetaCyc:RXN0-882","RHEA:26119"],"synonyms":[{"name":"(E)-4-hydroxy-3-methylbut-2-en-1-yl-diphosphate:oxidized ferredoxin oxidoreductase activity","type":"exact"},{"name":"(E)-4-hydroxy-3-methylbut-2-enyl diphosphate synthase activity","type":"broad"},{"name":"1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase activity","type":"broad"},{"name":"1-hydroxy-2-methyl-2-butenyl 4-diphosphate synthase activity","type":"broad"}],"termid":"GO:0046429"}


id: GO:0035916
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism effects a change in the frequency, rate or extent of the activity of a calcium channel in another organism.","definition_xrefs":["GOC:fj","GOC:bf","PMID:20920515"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of calcium channel activity in another organism (obsolete GO:0035916)","synonyms":[{"name":"modulation of calcium channel activity in other organism","type":"exact"}],"termid":"GO:0035916"}


id: PBO:0091480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosamine-phosphate N-acetyltransferase","termid":"PBO:0091480"}


id: MONDO:0006023
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0006023 (obsolete MONDO:0006023)","termid":"MONDO:0006023","xrefs":{"Monarch":{"xref_id":"0006023"}}}


id: PBO:0034673
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_break-induced_loss_of_heterozygosity_via_chromosomal_translocation","termid":"PBO:0034673"}


id: PBO:0083811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential RNA-binding component of cleavage and polyadenylation factor; contains five zinc fingers; required for pre-mRNA 3'-end processing and polyadenylation; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0083811"}


id: GO:0086095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A G protein-coupled acetylcholine receptor signaling pathway that contributes to a decrease in frequency or rate of heart contraction through activation of the IKACh potassium channel. Binding of acetylcholine to a G protein-coupled acetylcholine receptor (muscarinic receptor) on the surface of the signal-receiving cell results in liberation of the G-beta/gamma complex from the alpha subunit. The G-beta/gamma complex binds directly to the inward-rectifying potassium channel IKACh. Once the ion channel is activated, potassium ions (K+) flow out of the cell and cause it to hyperpolarize. In its hyperpolarized state, action potentials cannot be fired as quickly as possible, which slows the heart rate.","definition_xrefs":["Wikipedia:G_protein-gated_ion_channel","GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of IKACh channel activity by G protein-coupled acetylcholine receptor signaling pathway involved in negative regulation of heart rate (obsolete GO:0086095)","synonyms":[{"name":"Gbeta/gamma-coupled muscarinic receptor signaling pathway involved in negative regulation of heart rate","type":"related"},{"name":"cardiac muscarinic receptor signaling via Gbeta/gamma","type":"related"},{"name":"muscarinic receptor signaling pathway involved in activation of IKACH","type":"exact"},{"name":"muscarinic receptor signaling pathway involved in ion channel activation","type":"broad"},{"name":"positive regulation of IKACh channel activity by G-protein coupled acetylcholine receptor signaling","type":"exact"}],"termid":"GO:0086095"}


id: GO:0060206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of physiological phases, occurring in the endometrium during the estrous cycle that recur at regular intervals during the reproductive years. The estrous cycle is an ovulation cycle where the endometrium is resorbed if pregnancy does not occur.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological phase","termid":"GO:0044848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"estrous cycle phase","termid":"GO:0060206"}


id: GO:1901462
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to formic acid.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of response to formic acid","termid":"GO:1901460"},{"relation_name":"positively_regulates","term_name":"response to formic acid","termid":"GO:1901425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to formic acid","synonyms":[{"name":"activation of response to formic acid","type":"narrow"},{"name":"up regulation of response to formic acid","type":"exact"},{"name":"up-regulation of response to formic acid","type":"exact"},{"name":"upregulation of response to formic acid","type":"exact"}],"termid":"GO:1901462"}


id: GO:0016008
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The larger of the two mitochondrial derivatives that arise by the unfolding of the Nebenkern during flagellum elongation; the major mitochondrial derivative is ovoid and darker than the minor derivative.","definition_xrefs":["GOC:mah","PMID:30802236","PMID:17123504","PMID:24211517"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial derivative","termid":"GO:0016007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"major mitochondrial derivative","termid":"GO:0016008"}


id: PBO:0041891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"catsper channel auxiliary subunit zeta","termid":"PBO:0041891"}


id: GO:0046902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the passage or uptake of molecules by the mitochondrial membrane.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial membrane organization","termid":"GO:0007006"},{"relation_name":"is_a","term_name":"regulation of membrane permeability","termid":"GO:0090559"},{"relation_name":"part_of","term_name":"mitochondrial transport","termid":"GO:0006839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0007005","GO:0006810"],"is_obsolete":false,"name":"regulation of mitochondrial membrane permeability","synonyms":[{"name":"regulation of mitochondrial envelope permeability","type":"related"},{"name":"regulation of transport across mitochondrial membrane","type":"exact"}],"termid":"GO:0046902"}


id: PBO:0073575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shisa family member 6","termid":"PBO:0073575"}


id: PBO:0043366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clathrin heavy chain like 1","termid":"PBO:0043366"}


id: SO:0000928
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An edit to insert a AA dinucleotide.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000928 insert_AA (obsolete SO:0000928)","synonyms":[{"name":"insert AA","type":"exact"}],"termid":"SO:0000928"}


id: PBO:0057953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3677","termid":"PBO:0057953"}


id: FYECO:0000110
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells are first grown in minimal medium lacking nitrogen and are then allowed to recover in rich medium.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping sequential growth conditions","termid":"FYECO:0000094"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitrogen starvation and recovery","synonyms":[{"name":"recovery from nitrogen depletion","type":"exact"},{"name":"recovery from nitrogen starvation","type":"exact"}],"termid":"FYECO:0000110"}


id: MONDO:0017065
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spina bifida aperta","termid":"MONDO:0017062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"lumbosacral spina bifida aperta","secondary_identifiers":["GARD:20954","icd11.foundation:417689735","Orphanet:268388","MEDGEN:1748032","UMLS:C5439434"],"termid":"MONDO:0017065","xrefs":{"Monarch":{"xref_id":"0017065"}}}


id: PBO:0004156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor, SYF2 family (predicted)","termid":"PBO:0004156"}


id: PBO:0004339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snoRNP assembly factor Naf1 (predicted)","termid":"PBO:0004339"}


id: MONDO:0030964
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"intellectual disability, autosomal dominant","termid":"MONDO:0100172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual developmental disorder, autosomal dominant 67","secondary_identifiers":["MEDGEN:1805690","OMIM:619927","UMLS:C5677006"],"synonyms":[{"name":"MRD67","type":"exact"},{"name":"intellectual developmental disorder, autosomal dominant 67","type":"exact"},{"name":"mental retardation, autosomal dominant 67","type":"exact"}],"termid":"MONDO:0030964","xrefs":{"Monarch":{"xref_id":"0030964"}}}


id: PBO:0065822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB5C antisense RNA 1","termid":"PBO:0065822"}


id: GO:0050101
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-mimosine + H2O = 3-hydroxy-4H-pyrid-4-one + L-serine.","definition_xrefs":["RHEA:75355","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amine-lyase activity","termid":"GO:0016843"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"mimosinase activity","secondary_identifiers":["EC:4.3.3.8","KEGG_REACTION:R04350","MetaCyc:MIMOSINASE-RXN"],"synonyms":[{"name":"mimosine amidohydrolase activity","type":"related"}],"termid":"GO:0050101"}


id: PBO:0120337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRIM41 antisense RNA 1","termid":"PBO:0120337"}


id: GO:0002237
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus by molecules of bacterial origin such as peptides derived from bacterial flagellin.","definition_xrefs":["GOC:sm","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to external biotic stimulus","termid":"GO:0043207"},{"relation_name":"part_of","term_name":"response to bacterium","termid":"GO:0009617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to molecule of bacterial origin","synonyms":[{"name":"response to bacteria associated molecule","type":"exact"},{"name":"response to bacterial associated molecule","type":"exact"},{"name":"response to bacterium associated molecule","type":"exact"}],"termid":"GO:0002237"}


id: GO:1903769
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cell proliferation in bone marrow.","definition_xrefs":["GOC:TermGenie","PMID:9241534","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"is_a","term_name":"regulation of cell proliferation in bone marrow","termid":"GO:0071863"},{"relation_name":"negatively_regulates","term_name":"cell proliferation in bone marrow","termid":"GO:0071838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell proliferation in bone marrow","synonyms":[{"name":"down regulation of bone marrow cell proliferation","type":"exact"},{"name":"down regulation of cell proliferation in bone marrow","type":"exact"},{"name":"down-regulation of bone marrow cell proliferation","type":"exact"},{"name":"down-regulation of cell proliferation in bone marrow","type":"exact"},{"name":"downregulation of bone marrow cell proliferation","type":"exact"},{"name":"downregulation of cell proliferation in bone marrow","type":"exact"},{"name":"inhibition of bone marrow cell proliferation","type":"narrow"},{"name":"inhibition of cell proliferation in bone marrow","type":"narrow"},{"name":"negative regulation of bone marrow cell proliferation","type":"exact"}],"termid":"GO:1903769"}


id: PBO:0078907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon CTG) 16-1","termid":"PBO:0078907"}


id: GO:0036447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of the accumulation of sugar-phosphate.","definition_xrefs":["PMID:17383224","GOC:am"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stress","termid":"GO:0062197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to sugar-phosphate stress","synonyms":[{"name":"cellular response to presence of non-metabolizable sugars","type":"related"}],"termid":"GO:0036447"}


id: PBO:0053925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1222","termid":"PBO:0053925"}


id: MONDO:0002874
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A germ cell tumor that arises from the testis and is characterized by the presence of one histologic component. This category includes seminoma, teratoma, embryonal carcinoma, yolk sac tumor, and trophoblastic tumor.","definition_xrefs":["NCIT:C39915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"testicular germ cell tumor","termid":"MONDO:0010108"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testicular pure germ cell tumor","secondary_identifiers":["DOID:4087","UMLS:C1514608","MEDGEN:308089"],"synonyms":[{"name":"testicular Pure germ cell tumor","type":"exact"},{"name":"testicular Pure germ cell tumour","type":"exact"}],"termid":"MONDO:0002874","xrefs":{"Monarch":{"xref_id":"0002874"}}}


id: PBO:0000332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-2 adaptor complex subunit Apm4 (predicted)","termid":"PBO:0000332"}


id: MONDO:0018907
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, partly cystic, epithelial tumor of the sellar region, presumably derived from Rathke pouch epithelium. It affects mainly children and young adults. There are two clinicopathological forms: adamantinomatous craniopharyngioma and papillary craniopharyngioma. The most significant factor associated with recurrence is the extent of surgical resection, with lesions greater than 5 cm in diameter carrying a markedly worse prognosis. (Adapted from WHO)","definition_xrefs":["NCIT:C2964"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary endocrine growth disease","termid":"MONDO:0015514"},{"relation_name":"is_a","term_name":"central nervous system organ benign neoplasm","termid":"MONDO:0000628"},{"relation_name":"is_a","term_name":"bone benign neoplasm","termid":"MONDO:0000631"},{"relation_name":"is_a","term_name":"squamous cell neoplasm","termid":"MONDO:0002532"},{"relation_name":"is_a","term_name":"sella turcica neoplasm","termid":"MONDO:0002720"},{"relation_name":"is_a","term_name":"disorder of facial skeleton","termid":"MONDO:0023369"},{"relation_name":"is_a","term_name":"benign epithelial neoplasm","termid":"MONDO:0036976"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"craniopharyngioma","secondary_identifiers":["NANDO:2200091","NORD:1996","Orphanet:54595","SCTID:189179009","MEDGEN:41339","DOID:3840","EFO:1000209","UMLS:C0010276","MESH:D003397","GARD:10486","ICD9:237.0","ICDO:9350/1","MedDRA:10011318"],"synonyms":[{"name":"Adamantinomatous tumor","type":"related"},{"name":"Adamantinomatous tumour","type":"related"},{"name":"Dysodontogenic epithelial tumor","type":"related"},{"name":"Dysodontogenic epithelial tumour","type":"related"},{"name":"Rathke pouch neoplasm","type":"exact"},{"name":"Rathke pouch tumor","type":"exact"},{"name":"Rathke pouch tumour","type":"exact"},{"name":"Rathke's pouch neoplasm","type":"exact"},{"name":"Rathke's pouch tumor","type":"exact"},{"name":"Rathke's pouch tumour","type":"exact"},{"name":"craniopharyngeal duct tumor","type":"related"},{"name":"craniopharyngeal duct tumour","type":"related"},{"name":"craniopharyngioma (WHO grade I)","type":"exact"},{"name":"craniopharyngioma (morphologic abnormality)","type":"exact"},{"name":"craniopharyngioma, benign","type":"exact"},{"name":"cystoma","type":"related"},{"name":"neoplasm of Rathke's pouch","type":"exact"},{"name":"tumor of Rathke's pouch","type":"exact"},{"name":"tumour of Rathke's pouch","type":"exact"}],"termid":"MONDO:0018907","xrefs":{"Monarch":{"xref_id":"0018907"}}}


id: SO:0005836
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of sequence that is involved in the control of a biological process.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_member_region","termid":"SO:0000831"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulatory_region","secondary_identifiers":["http://en.wikipedia.org/wiki/Regulatory_region"],"synonyms":[{"name":"INSDC_feature:regulatory","type":"broad"},{"name":"INSDC_qualifier:other","type":"exact"},{"name":"regulatory region","type":"exact"}],"termid":"SO:0005836"}


id: FYPO:0006431
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the mitotic spindle pole body is larger than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle pole body morphology","termid":"FYPO:0001474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"enlarged mitotic spindle pole body","synonyms":[{"name":"enlarged mitotic SPB","type":"exact"},{"name":"enlarged spindle pole body during mitotic cell cycle","type":"exact"},{"name":"enlarged spindle pole body during vegetative growth","type":"exact"}],"termid":"FYPO:0006431"}


id: MONDO:0100216
data:
  {"annotated_genes":["SJAG_03689"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88504],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007681"},{"annotations":[88138],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011014"}]},"cv_name":"mondo","definition":"Pathogenic germline variation in DICER1 confers an autosomal dominant predisposition to tumor formation at multiple primary sites, including pleuropulmonary blastoma, pulmonary cysts, thyroid gland neoplasia, ovarian tumors, and cystic nephroma. Other syndromic features such as macrocephaly have been described.","definition_xrefs":["PMID:24761742","PMID:34599283","PMID:21266384"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03689":null},"genotype_count":0,"is_obsolete":false,"name":"DICER1-related tumor predisposition","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:10734","Orphanet:284343","SCTID:702411003","MEDGEN:825667","NCIT:C123317","DOID:0081063","UMLS:C3839822","ICD9:199.1"],"synonyms":[{"name":"DICER1 syndrome","type":"exact"},{"name":"DICER1-related pleuropulmonary blastoma","type":"related"},{"name":"DICER1-related pleuropulmonary blastoma cancer predisposition syndrome","type":"related"},{"name":"PPB familial tumor susceptibility syndrome","type":"exact"},{"name":"PPB familial tumour susceptibility syndrome","type":"exact"},{"name":"PPBFTDS","type":"exact"},{"name":"pleuro-pulmonary blastoma familial tumor susceptibility syndrome","type":"exact"},{"name":"pleuro-pulmonary blastoma familial tumour susceptibility syndrome","type":"exact"},{"name":"pleuropulmonary blastoma familial tumor susceptibility syndrome","type":"exact"},{"name":"pleuropulmonary blastoma familial tumour susceptibility syndrome","type":"exact"}],"termid":"MONDO:0100216","terms_by_termid":{"MONDO:0007681":null,"MONDO:0011014":null},"xrefs":{"Monarch":{"xref_id":"0100216"}}}


id: PR:O14254
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An isocitrate dehydrogenase [NADP], mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11822:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isocitrate dehydrogenase [NADP], mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G10.08","secondary_identifiers":["UniProtKB:O14254"],"synonyms":[{"name":"IDH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"IDP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"NADP(+)-specific ICDH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC6G10.08","type":"related"},{"name":"Spom972h-IDH2nadp","type":"exact"},{"name":"oxalosuccinate decarboxylase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14254"}


id: GO:0047403
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + beta-D-Gal-(1,3)-beta-D-GlcNAc-(1,3)-beta-D-Gal-(1,4)-D-Glc = beta-D-Gal-(1,4)-D-Glc + beta-D-Gal-(1,3)-D-GlcNAc.","definition_xrefs":["EC:3.2.1.140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016798","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"lacto-N-biosidase activity","secondary_identifiers":["RHEA:21568","MetaCyc:RXN-8731"],"synonyms":[{"name":"oligosaccharide lacto-N-biosylhydrolase activity","type":"related"}],"termid":"GO:0047403"}


id: PBO:0003629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein Mis15","termid":"PBO:0003629"}


id: GO:0006580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ethanolamine (2-aminoethanol), an important water-soluble base of phospholipid (phosphatidylethanolamine).","definition_xrefs":["ISBN:0192800981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary alcohol metabolic process","termid":"GO:0034308"},{"relation_name":"is_a","term_name":"ethanolamine-containing compound metabolic process","termid":"GO:0042439"},{"relation_name":"is_a","term_name":"primary amino compound metabolic process","termid":"GO:1901160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"ethanolamine metabolic process","secondary_identifiers":["GO:0006645"],"synonyms":[{"name":"ethanolamine metabolism","type":"exact"}],"termid":"GO:0006580"}


id: PBO:0046237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 31","termid":"PBO:0046237"}


id: SO:1000108
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000108 mutaton_causing_inframe_polypeptide_C_terminal_elongation (obsolete SO:1000108)","synonyms":[{"name":"inframe_polypeptide C-terminal elongation","type":"exact"},{"name":"mutaton causing inframe polypeptide C terminal elongation","type":"exact"}],"termid":"SO:1000108"}


id: MONDO:0006699
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Presence or formation of gallstones in the common bile duct.","definition_xrefs":["MESH:D042883"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"endocrine system disorder","termid":"MONDO:0005151"},{"relation_name":"excluded_subClassOf","term_name":"gallbladder disorder","termid":"MONDO:0005281"},{"relation_name":"is_a","term_name":"common bile duct disorder","termid":"MONDO:0002886"},{"relation_name":"is_a","term_name":"gallstones","termid":"MONDO:0005346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"choledocholithiasis","secondary_identifiers":["UMLS:C0701818","MedDRA:10049891","MEDGEN:148784","DOID:11755","EFO:1000865"],"termid":"MONDO:0006699","xrefs":{"Monarch":{"xref_id":"0006699"}}}


id: GO:0042409
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + caffeoyl-CoA = S-adenosyl-L-homocysteine + feruloyl-CoA.","definition_xrefs":["EC:2.1.1.104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"caffeoyl-CoA O-methyltransferase activity","secondary_identifiers":["RHEA:16925","MetaCyc:CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:caffeoyl-CoA 3-O-methyltransferase activity","type":"related"},{"name":"caffeoyl CoA:S-adenosyl-L-methionine O-methyltransferase activity","type":"exact"},{"name":"caffeoyl coenzyme A methyltransferase activity","type":"exact"},{"name":"caffeoyl-CoA 3-O-methyltransferase activity","type":"exact"},{"name":"trans-caffeoyl-CoA 3-O-methyltransferase activity","type":"related"}],"termid":"GO:0042409"}


id: PBO:0086766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; similar to DTDP-glucose 4,6-dehydratases; GFP-fusion protein localizes to the cytoplasm; up-regulated in response to the fungicide mancozeb; not essential for viability","termid":"PBO:0086766"}


id: MONDO:0958181
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial trifunctional protein deficiency","termid":"MONDO:0012172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525","MONDO:0005336","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial trifunctional protein deficiency 1","secondary_identifiers":["OMIM:609015"],"termid":"MONDO:0958181","xrefs":{"Monarch":{"xref_id":"0958181"}}}


id: PBO:0049509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A clustered histone 16","termid":"PBO:0049509"}


id: PBO:0117394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease P subunit p21","termid":"PBO:0117394"}


id: GO:0045059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of sparing immature T cells in the thymus which react with self-MHC protein complexes with low affinity levels from apoptotic death.","definition_xrefs":["ISBN:0781735149","PMID:12414722"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive T cell selection","termid":"GO:0043368"},{"relation_name":"is_a","term_name":"thymic T cell selection","termid":"GO:0045061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive thymic T cell selection","synonyms":[{"name":"positive thymic T lymphocyte selection","type":"exact"},{"name":"positive thymic T-cell selection","type":"exact"},{"name":"positive thymic T-lymphocyte selection","type":"exact"}],"termid":"GO:0045059"}


id: GO:0048728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the proboscis over time, from its formation to the mature structure.","definition_xrefs":["GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"},{"relation_name":"part_of","term_name":"clypeo-labral disc development","termid":"GO:0035213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proboscis development","secondary_identifiers":["GO:0016349"],"termid":"GO:0048728"}


id: MONDO:1012822
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital myopathy that occurs in pigs due to a mutation in the SPTBN4 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myopathy, non-human animal","termid":"MONDO:1010196"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital myopathy, SPTBN4-related, pig","secondary_identifiers":["OMIA:002232-9823"],"termid":"MONDO:1012822","xrefs":{"Monarch":{"xref_id":"1012822"}}}


id: GO:0000250
data:
  {"annotated_genes":["SJAG_00624"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75703],"is_not":false,"summary":null,"term":"GO:0000250"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-2,3-epoxysqualene = lanosterol. This is a cyclization reaction that forms the sterol nucleus.","definition_xrefs":["RHEA:14621","EC:5.4.99.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidosqualene cyclase activity","termid":"GO:0031559"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00624":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"lanosterol synthase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:LANOSTEROL-SYNTHASE-RXN","Reactome:R-HSA-191366","KEGG_REACTION:R03199"],"synonyms":[{"name":"(S)-2,3-epoxysqualene mutase (cyclizing, lanosterol-forming)","type":"related"},{"name":"2,3-epoxysqualene lanosterol cyclase activity","type":"related"},{"name":"2,3-epoxysqualene--lanosterol cyclase activity","type":"related"},{"name":"2,3-epoxysqualene-lanosterol cyclase activity","type":"exact"},{"name":"2,3-oxidosqualene sterol cyclase activity","type":"broad"},{"name":"2,3-oxidosqualene-lanosterol cyclase activity","type":"related"},{"name":"OSC","type":"exact"},{"name":"lanosterol 2,3-oxidosqualene cyclase activity","type":"related"},{"name":"oxidosqualene--lanosterol cyclase activity","type":"related"},{"name":"oxidosqualene-lanosterol cyclase activity","type":"exact"},{"name":"oxidosqualene:lanosterol cyclase activity","type":"exact"},{"name":"squalene 2,3-epoxide:lanosterol cyclase activity","type":"related"},{"name":"squalene epoxidase-cyclase activity","type":"broad"},{"name":"squalene-2,3-oxide-lanosterol cyclase activity","type":"related"}],"termid":"GO:0000250","terms_by_termid":{"GO:0000250":null}}


id: PBO:0027156
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_vacuolar_asparagine_level","termid":"PBO:0027156"}


id: GO:0061331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of epithelial cells, resulting in the expansion of a cell population and contributing to the shaping of a Malpighian tubule.","definition_xrefs":["GOC:dph","GOC:mtg_kidney_jan10","PMID:19783135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell proliferation involved in renal tubule morphogenesis","termid":"GO:2001013"},{"relation_name":"part_of","term_name":"Malpighian tubule morphogenesis","termid":"GO:0007443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell proliferation involved in Malpighian tubule morphogenesis","termid":"GO:0061331"}


id: PBO:0057383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548ay","termid":"PBO:0057383"}


id: PBO:0079306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 3","termid":"PBO:0079306"}


id: PBO:0087661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Iml1p/SEACIT complex; SEACIT (Iml1p-Npr2p-Npr3p) is a subcomplex of the SEA complex, a coatomer-related complex that associates dynamically with the vacuole; Npr2p may have a structural or regulatory role, supporting Iml1p function as a GAP for the Rag family GTPase Gtr1p, and resulting in inhibition of TORC1 signaling in response to amino acid deprivation; SEACIT is required for non-nitrogen-starvation-induced autophagy; homolog of human tumor suppressor NPRL2","termid":"PBO:0087661"}


id: GO:0051550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving aurones, a series of plant flavonoids that provide a yellow colour to flowers. They have the basic skeletal structure of two benzene rings joined by a linear C3 chain (C6-C3-C6). Aurones exist mostly as 6-O-glucosides.","definition_xrefs":["PMID:20035037"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavonoid metabolic process","termid":"GO:0009812"},{"relation_name":"is_a","term_name":"ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"pigment metabolic process","termid":"GO:0042440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aurone metabolic process","synonyms":[{"name":"aurone metabolism","type":"exact"},{"name":"benzalcoumaran-3-one metabolic process","type":"exact"},{"name":"benzalcoumaran-3-one metabolism","type":"exact"}],"termid":"GO:0051550"}


id: GO:0046397
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of galacturonate, the anion of galacturonic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galacturonate metabolic process","termid":"GO:0019586"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"galacturonate catabolic process","secondary_identifiers":["GO:0019587"],"synonyms":[{"name":"galacturonate breakdown","type":"exact"},{"name":"galacturonate catabolism","type":"exact"},{"name":"galacturonate degradation","type":"exact"}],"termid":"GO:0046397"}


id: PBO:0003369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Utp1 (predicted)","termid":"PBO:0003369"}


id: PBO:0058888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 10525","termid":"PBO:0058888"}


id: MONDO:0007214
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Preaxial brachydactyly-hallux varus syndrome is characterized the association of hallux varus with short thumbs and first toes (involving the metacarpals, metatarsals, and distal phalanges; the proximal and middle phalanges are of normal length) and abduction of the affected digits.","definition_xrefs":["Orphanet:1278"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly-preaxial hallux varus syndrome","secondary_identifiers":["GARD:972","DOID:0110962","MESH:C537087","OMIM:112450","UMLS:C1862162","MEDGEN:349442"],"synonyms":[{"name":"Christian brachydactyly","type":"exact"},{"name":"brachydactyly preaxial with hallux varus and thumb abduction","type":"related"},{"name":"brachydactyly, preaxial, with hallux varus and thumb abduction","type":"related"},{"name":"dominant preaxial brachydactyly with hallux varus and thumb abduction","type":"related"},{"name":"preaxial brachydactyly with hallux varus and thumb abduction","type":"exact"}],"termid":"MONDO:0007214","xrefs":{"Monarch":{"xref_id":"0007214"}}}


id: PBO:0089135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial endonuclease family, related to holliday junction resolvases, implicated in DNA or tRNA metabolism","termid":"PBO:0089135"}


id: MONDO:0000626
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the vestibular gland.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vulvar benign neoplasm","termid":"MONDO:0000643"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vestibular gland benign neoplasm","secondary_identifiers":["DOID:0060088"],"synonyms":[{"name":"vestibular gland benign neoplasm","type":"exact"}],"termid":"MONDO:0000626","xrefs":{"Monarch":{"xref_id":"0000626"}}}


id: PBO:0031392
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_cysteine","termid":"PBO:0031392"}


id: GO:1902603
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of carnitine across a membrane.","definition_xrefs":["GOC:pr","GOC:TermGenie","GO_REF:0000069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carnitine transport","termid":"GO:0015879"},{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"carnitine transmembrane transport","termid":"GO:1902603"}


id: PBO:0081208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger with KRAB and SCAN domains 8","termid":"PBO:0081208"}


id: MONDO:0016156
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"qualitative or quantitative defects of protein involved in O-glycosylation of alpha-dystroglycan","termid":"MONDO:0016155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"qualitative or quantitative defects of FKRP","secondary_identifiers":["UMLS:C5680827","Orphanet:207119","MEDGEN:1842706","GARD:20403"],"termid":"MONDO:0016156","xrefs":{"Monarch":{"xref_id":"0016156"}}}


id: GO:0035942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of dehydroepiandrosterone (3beta-hydroxyandrost-5-en-17-one) into the circulatory system.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"hormone secretion","termid":"GO:0046879"},{"relation_name":"is_a","term_name":"lipid export from cell","termid":"GO:0140353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"dehydroepiandrosterone secretion","synonyms":[{"name":"3beta-hydroxyandrost-5-en-17-one secretion","type":"exact"},{"name":"DHEA secretion","type":"exact"},{"name":"dehydroisoandrosterone secretion","type":"exact"}],"termid":"GO:0035942"}


id: MONDO:1012008
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"alloxan-diabetes, non-human animal","termid":"MONDO:1011712"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alloxan-diabetes, dog","secondary_identifiers":["OMIA:000029-9615"],"termid":"MONDO:1012008","xrefs":{"Monarch":{"xref_id":"1012008"}}}


id: MONDO:0019161
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, primary form of mineralocorticoid resistance characterized by mild to profound salt wasting either restricted to the kidney (renal pseudohypoaldosteronism type 1), or generalized affecting many organs (generalized pseudohypoaldosteronism type 1). Clinical presentation is in the neonatal period with failure to thrive, vomiting and dehydration with biochemical findings of hyperkalaemia, metabolic acidosis and, elevated plasma aldosterone and renin concentration.","definition_xrefs":["Orphanet:756"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited renal tubular disease","termid":"MONDO:0015962"},{"relation_name":"is_a","term_name":"inherited pseudohypoaldosteronism","termid":"MONDO:0100323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"pseudohypoaldosteronism type 1","secondary_identifiers":["SCTID:43941006","ICD9:275.8","GARD:16545","UMLS:C0268436","NCIT:C123251","NANDO:2200368","icd11.foundation:1576878036","MEDGEN:82805","OMIMPS:177735"],"synonyms":[{"name":"PHA type 1","type":"exact"},{"name":"PHA1B","type":"narrow"},{"name":"pseudohypoaldosteronism type I autosomal recessive","type":"narrow"},{"name":"pseudohypoaldosteronism, type I","type":"exact"}],"termid":"MONDO:0019161","xrefs":{"Monarch":{"xref_id":"0019161"}}}


id: FYPO:0005608
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which ubiquitination of lysine at position 119 of histone H2B occurs to a lower extent than normal in regions surrounding double-strand DNA breaks. Lysine 119 corresponds to the conserved C-terminal lysine of H2B.","definition_xrefs":["PMID:27098497","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein ubiquitination during vegetative growth","termid":"FYPO:0002768"},{"relation_name":"is_a","term_name":"decreased histone H2B-K119 ubiquitination during vegetative growth","termid":"FYPO:0007386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0002494","FYPO:0002274","FYPO:0005447"],"is_obsolete":false,"name":"decreased histone H2B-K119 ubiquitination at double-strand break site during vegetative growth","synonyms":[{"name":"decreased histone H2B conserved C-terminal lysine ubiquitination at double-strand break site during vegetative growth","type":"exact"},{"name":"decreased histone H2B-K119 ubiquitination at DSB during vegetative growth","type":"exact"},{"name":"decreased histone H2B-K119 ubiquitination at double-strand break site during mitotic cell cycle","type":"related"},{"name":"decreased histone H2B-K119 ubiquitination at site of double-strand break during vegetative growth","type":"exact"},{"name":"reduced histone H2B-K119 ubiquitination at double-strand break during vegetative growth","type":"exact"}],"termid":"FYPO:0005608"}


id: PBO:0029289
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delaminated_cell_wall_during_G0","termid":"PBO:0029289"}


id: PBO:0041912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cbl proto-oncogene like 2","termid":"PBO:0041912"}


id: FYPO:0005604
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which sites at which the protein Rad52 accumulates remain present for longer than normal during a cellular response to ionizing radiation.","definition_xrefs":["PMID:27098497","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased duration of Rad52 focus presence during vegetative growth","termid":"FYPO:0007191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased duration of Rad52 focus presence during cellular response to ionizing radiation","synonyms":[{"name":"delayed peak level of Rad52 foci during cellular response to ionizing radiation","type":"related"},{"name":"increased duration of Rad22 focus presence during cellular response to ionizing radiation","type":"exact"},{"name":"increased duration of Rad52 focus presence during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"increased duration of Rad52 focus presence during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"increased persistence of Rad52 foci during cellular response to ionizing radiation","type":"exact"},{"name":"prolonged Rad52 focus presence during cellular response to ionizing radiation","type":"exact"}],"termid":"FYPO:0005604"}


id: GO:0042942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which of D-serine, the D-enantiomer of 2-amino-3-hydroxypropanoic acid is transported across a lipid bilayer, from one side of a membrane to the other, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl","GOC:mah","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transport","termid":"GO:0003333"},{"relation_name":"is_a","term_name":"serine transport","termid":"GO:0032329"},{"relation_name":"is_a","term_name":"D-amino acid transport","termid":"GO:0042940"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"D-serine transmembrane transport","termid":"GO:0042942"}


id: FYPO:0001573
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to rapamycin is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"increased RNA level during cellular response to rapamycin","synonyms":[{"name":"increased RNA accumulation during cellular response to rapamycin","type":"related"},{"name":"increased RNA level during cellular response to rapamycin during mitotic cell cycle","type":"related"},{"name":"increased RNA level during cellular response to rapamycin during vegetative growth","type":"exact"},{"name":"increased mRNA level during cellular response to rapamycin","type":"narrow"},{"name":"increased transcript level during cellular response to rapamycin","type":"exact"}],"termid":"FYPO:0001573"}


id: PBO:0005822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase Gst2","termid":"PBO:0005822"}


id: GO:0002880
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of a chronic inflammatory response to a non-antigenic stimulus.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chronic inflammatory response","termid":"GO:0002676"},{"relation_name":"regulates","term_name":"chronic inflammatory response to non-antigenic stimulus","termid":"GO:0002545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of chronic inflammatory response to non-antigenic stimulus","termid":"GO:0002880"}


id: PR:P28706
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA repair protein complementing XP-G cells that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein rad13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3E7.08c","secondary_identifiers":["UniProtKB:P28706"],"synonyms":[{"name":"SPBC3E7.08c","type":"related"},{"name":"Spom972h-ERCC5","type":"exact"}],"termid":"PR:P28706"}


id: FYPO:0000289
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A gene expression phenotype that affects the regulation of translation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene expression regulation phenotype","termid":"FYPO:0000288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"translation regulation phenotype","synonyms":[{"name":"fission yeast translation regulation phenotype","type":"exact"}],"termid":"FYPO:0000289"}


id: GO:2000323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of nuclear receptor-mediated glucocorticoid signaling pathway.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intracellular steroid hormone receptor signaling pathway","termid":"GO:0033144"},{"relation_name":"is_a","term_name":"regulation of nuclear receptor-mediated glucocorticoid signaling pathway","termid":"GO:2000322"},{"relation_name":"negatively_regulates","term_name":"nuclear receptor-mediated glucocorticoid signaling pathway","termid":"GO:0042921"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of nuclear receptor-mediated glucocorticoid signaling pathway","synonyms":[{"name":"negative regulation of glucocorticoid receptor signaling pathway","type":"exact"},{"name":"negative regulation of glucocorticoid receptor signalling pathway","type":"exact"}],"termid":"GO:2000323"}


id: PBO:0084518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of conserved ER transmembrane complex; required for efficient folding of proteins in the ER; required for respiratory growth; null mutant displays induction of the unfolded protein response; homologous to worm Y62E10A.10/EMC-3, fly CG6750, human TMEM111","termid":"PBO:0084518"}


id: MONDO:0004600
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"leukemia","termid":"MONDO:0005059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"monocytic leukemia","secondary_identifiers":["ICD9:206.81","DOID:8527","ICD9:206.80","ICD9:206.91","ICD9:206.90","UMLS:C0598894","MEDGEN:109338","ICD10CM:C93","ICD9:206.8","SCTID:188744006"],"synonyms":[{"name":"schilling's leukaemia","type":"exact"},{"name":"schilling's leukemia","type":"exact"}],"termid":"MONDO:0004600","xrefs":{"Monarch":{"xref_id":"0004600"}}}


id: MONDO:0014736
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Charcot-Marie-Tooth disease in which the cause of the disease is a mutation in the MORC2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 2","termid":"MONDO:0018993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease axonal type 2Z","secondary_identifiers":["GARD:17829","OMIM:616688","DOID:0110181","Orphanet:466768","MEDGEN:1800448","UMLS:C5569025"],"synonyms":[{"name":"CMT2Z","type":"exact"},{"name":"Charcot-Marie-Tooth disease caused by mutation in MORC2","type":"exact"},{"name":"Charcot-Marie-Tooth disease, axonal, autosomal dominant, type 2Z","type":"related"},{"name":"Charcot-Marie-Tooth disease, axonal, type 2Z","type":"related"},{"name":"Charcot-Marie-Tooth disease, axonal, type 2z","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy type 2Z","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, type 2Z","type":"related"},{"name":"MORC2 Charcot-Marie-Tooth disease","type":"exact"},{"name":"autosomal dominant Charcot-Marie-Tooth disease type 2 due to MORC2 mutation","type":"exact"},{"name":"autosomal dominant Charcot-Marie-Tooth disease type 2Z","type":"related"},{"name":"autosomal dominant axonal Charcot-Marie-Tooth disease type 2Z","type":"exact"}],"termid":"MONDO:0014736","xrefs":{"Monarch":{"xref_id":"0014736"}}}


id: GO:0008069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Polarization of the ovarian follicle cells along the dorsal/ventral axis. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:bf","GOC:dph","GOC:mtg_sensu","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"dorsal/ventral axis specification","termid":"GO:0009950"},{"relation_name":"is_a","term_name":"establishment or maintenance of polarity of follicular epithelium","termid":"GO:0016334"},{"relation_name":"part_of","term_name":"follicle cell of egg chamber development","termid":"GO:0030707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"dorsal/ventral axis specification, ovarian follicular epithelium","synonyms":[{"name":"dorsal-ventral axis specification, ovarian follicular epithelium","type":"exact"},{"name":"dorsal/ventral axis determination, follicular epithelium","type":"related"},{"name":"dorsal/ventral axis determination, ovarian follicular epithelium","type":"exact"},{"name":"dorsoventral axis specification, ovarian follicular epithelium","type":"exact"}],"termid":"GO:0008069"}


id: FYPO:0006831
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which primary cell septum biogenesis begins later than normal.","definition_xrefs":["PomBase:mah","GO:0031671"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal primary cell septum biogenesis","termid":"FYPO:0003890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001320","FYPO:0001985","FYPO:0000032","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"delayed onset of primary cell septum biogenesis","synonyms":[{"name":"delayed onset of primary cell septum biogenesis during mitotic cell cycle","type":"related"},{"name":"delayed onset of primary cell septum biogenesis during vegetative growth","type":"exact"},{"name":"delayed onset of primary cell septum formation","type":"exact"},{"name":"delayed onset of primary septum biogenesis","type":"exact"},{"name":"delayed onset of primary septum synthesis","type":"related"},{"name":"delayed primary cell septum biogenesis","type":"exact"}],"termid":"FYPO:0006831"}


id: FYPO:0007739
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleolar ring disassembly begins later than normal. Nucleolar rings are structures located at the nucleolar periphery where several nuclear factors are reversibly aggregated and sequestered during acute heat stress. They normally disassemble upon removal of heat stress.","definition_xrefs":["PomBase:mah","PMID:33176152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component organization during vegetative growth","termid":"FYPO:0001353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"delayed onset of nucleolar ring disassembly","synonyms":[{"name":"delayed nucleolar ring disassembly","type":"exact"},{"name":"delayed nucleolar ring disassembly during recovery from heat shock","type":"exact"},{"name":"delayed onset of NuR disassembly","type":"exact"},{"name":"delayed onset of nucleolar ring disassembly during mitotic cell cycle","type":"related"},{"name":"delayed onset of nucleolar ring disassembly during vegetative growth","type":"exact"}],"termid":"FYPO:0007739"}


id: MOD:00182
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-histidine residue to L-bromohistidine.","definition_xrefs":["PubMed:9033387","RESID:AA0173","PubMed:2076468","Unimod:340#H"],"direct_ancestors":[{"relation_name":"is_a","term_name":"halogenated histidine","termid":"MOD:01049"},{"relation_name":"is_a","term_name":"monobrominated residue","termid":"MOD:01912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-bromohistidine","synonyms":[{"name":"Br1His","type":"exact"},{"name":"Bromo","type":"related"},{"name":"L-bromohistidine","type":"exact"},{"name":"MOD_RES Bromohistidine","type":"exact"},{"name":"bromination","type":"related"}],"termid":"MOD:00182"}


id: PBO:0088139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar protein component of the retromer; forms part of the multimeric membrane-associated retromer complex involved in vacuolar protein sorting along with Vps35p, Vps29p, Vps17p, and Vps5p; essential for endosome-to-Golgi retrograde protein transport; interacts with Ypt7p; protein abundance increases in response to DNA replication stress","termid":"PBO:0088139"}


id: MONDO:0030712
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"oculopharyngodistal myopathy","termid":"MONDO:0025193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"oculopharyngodistal myopathy 4","secondary_identifiers":["UMLS:C5676941","MEDGEN:1809981","DOID:0081300","OMIM:619790"],"synonyms":[{"name":"OPDM4","type":"exact"},{"name":"oculopharyngodistal myopathy 4","type":"exact"}],"termid":"MONDO:0030712","xrefs":{"Monarch":{"xref_id":"0030712"}}}


id: MONDO:0010662
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by intellectual deficit, spasticity in the lower limbs (spastic paraplegia), pes cavus deformity of both feet, an abnormal gait, and palmar and plantar hyperkeratosis. It has been reported in four brothers. The mother of the affected boys had normal intelligence, plantar hyperkeratosis and a strong facial resemblance to her retarded sons. Her three daughters were normal. This syndrome most likely an X-linked recessive condition.","definition_xrefs":["Orphanet:2824"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paraplegia-intellectual disability-hyperkeratosis syndrome","secondary_identifiers":["MEDGEN:411554","OMIM:309560","UMLS:C2745996","MESH:C537058","GARD:2344"],"synonyms":[{"name":"Fitzsimmons-McLachlan-Gilbert syndrome","type":"exact"},{"name":"intellectual disability with spastic paraplegia and palmoplantar hyperkeratosis","type":"related"},{"name":"mental retardation with spastic paraplegia and palmoplantar hyperkeratosis","type":"related"}],"termid":"MONDO:0010662","xrefs":{"Monarch":{"xref_id":"0010662"}}}


id: PBO:0014582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA (guanine) methyltransferase Bud23 (predicted)","termid":"PBO:0014582"}


id: MONDO:0009922
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pseudouridinuria and mental defect","secondary_identifiers":["MEDGEN:376629","OMIM:264500","MESH:C564864","UMLS:C1849648"],"synonyms":[{"name":"Pseudouridinuria and mental defect","type":"exact"}],"termid":"MONDO:0009922","xrefs":{"Monarch":{"xref_id":"0009922"}}}


id: GO:0007272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which glial cells envelop neuronal cell bodies and/or axons to form an insulating layer. This can take the form of myelinating or non-myelinating ensheathment.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"},{"relation_name":"part_of","term_name":"nervous system development","termid":"GO:0007399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ensheathment of neurons","synonyms":[{"name":"ionic insulation of neurons by glial cells","type":"related"}],"termid":"GO:0007272"}


id: PBO:0048358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 69","termid":"PBO:0048358"}


id: PBO:0001482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoadenosine phosphosulfate reductase","termid":"PBO:0001482"}


id: PBO:0036275
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdc42 diffuses laterally within the plasma membrane, faster at cell sides than at cell tips, and the GDP-bound form diffuses faster than the GTP-bound form","termid":"PBO:0036275"}


id: PATO:0001865
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A convex 3-D shape quality inhering in a bearer by virtue of the bearer's having a quadric surface in three dimensions obtained by rotating an ellipse about one of its principal axes. Includes spheres and oblate/prolate spheroids.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Spheroid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"convex 3-D shape","termid":"PATO:0002007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spheroid","secondary_identifiers":["PATO:0001864"],"synonyms":[{"name":"sphericality","type":"related"}],"termid":"PATO:0001865"}


id: PR:P50520
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phosphatidylinositol 3-kinase catalytic subunit type 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01959","PANTHER:PTHR10048:SF7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol 3-kinase vps34 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC458.05","secondary_identifiers":["UniProtKB:P50520"],"synonyms":[{"name":"PI3-kinase vps34 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PI3K vps34 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PtdIns-3-kinase vps34 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PIK3C3","type":"exact"},{"name":"vacuolar protein sorting-associated protein 34 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P50520"}


id: PBO:0046118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4E binding protein 2 pseudogene 2","termid":"PBO:0046118"}


id: PBO:0034685
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_intergenic_meiotic_recombination","termid":"PBO:0034685"}


id: GO:0051635
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a component on the surface of a bacterial cell.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete bacterial cell surface binding (obsolete GO:0051635)","synonyms":[{"name":"bacterial binding","type":"exact"},{"name":"bacterial cell surface binding","type":"exact"},{"name":"bacterium binding","type":"exact"},{"name":"bacterium cell surface binding","type":"exact"},{"name":"binding to bacterium","type":"exact"}],"termid":"GO:0051635"}


id: FYPO:0003543
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the number of sites of double-strand breaks in DNA is greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased DNA damage","termid":"FYPO:0003546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"increased number of double-strand break sites","synonyms":[{"name":"accumulation of DNA damage foci","type":"related"},{"name":"accumulation of double-strand break sites","type":"exact"},{"name":"increased number of DNA damage foci","type":"related"}],"termid":"FYPO:0003543"}


id: PBO:0058278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4655","termid":"PBO:0058278"}


id: MONDO:0015852
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete excess breast volume or number (obsolete MONDO:0015852)","secondary_identifiers":["Orphanet:180170"],"termid":"MONDO:0015852","xrefs":{"Monarch":{"xref_id":"0015852"}}}


id: FYPO:0007433
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of dATP measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular dNTP level","termid":"FYPO:0005753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal cellular dATP level","synonyms":[{"name":"normal cellular dATP level during mitotic cell cycle","type":"related"},{"name":"normal cellular dATP level during vegetative growth","type":"exact"},{"name":"normal dATP accumulation","type":"related"}],"termid":"FYPO:0007433"}


id: PBO:0056133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysozyme like 2","termid":"PBO:0056133"}


id: PBO:0110349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CMPK1 pseudogene 1","termid":"PBO:0110349"}


id: PBO:0050181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxy-3-methylglutaryl-CoA synthase 1","termid":"PBO:0050181"}


id: GO:0000406
data:
  {"annotated_genes":["SJAG_01419","SJAG_02226","SJAG_01076"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102408,107907,118672],"is_not":false,"summary":null,"term":"GO:0000406"}]},"cv_name":"molecular_function","definition":"Binding to a DNA segment that contains double-stranded DNA flanked by a region of single-stranded DNA.","definition_xrefs":["GOC:elh","PMID:16781730"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA secondary structure binding","termid":"GO:0000217"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01076":null,"SJAG_01419":null,"SJAG_02226":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003677","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"double-strand/single-strand DNA junction binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000406","terms_by_termid":{"GO:0000406":null}}


id: GO:0015470
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Polypeptide antibiotic secreted by bacteria and able to kill bacteria of susceptible strains after absorption by specific cell surface receptor.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete bacteriocin activity (obsolete GO:0015470)","synonyms":[{"name":"bacteriocin activity","type":"exact"}],"termid":"GO:0015470"}


id: PBO:0062310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily T member 2","termid":"PBO:0062310"}


id: GO:0018978
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 1,1,1-trichloro-2,2-bis-(4-chlorophenyl)ethane (DDT), a chlorinated, broad spectrum, contact insecticide, in the absence of oxygen.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"1,1,1-trichloro-2,2-bis-(4-chlorophenyl)ethane metabolic process","termid":"GO:0018977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"anaerobic 1,1,1-trichloro-2,2-bis-(4-chlorophenyl)ethane metabolic process","secondary_identifiers":["UM-BBD_pathwayID:ddt2"],"synonyms":[{"name":"anaerobic 1,1,1-trichloro-2,2-bis-(4-chlorophenyl)ethane metabolism","type":"exact"},{"name":"anaerobic DDT metabolic process","type":"exact"},{"name":"anaerobic DDT metabolism","type":"exact"}],"termid":"GO:0018978"}


id: PBO:0062445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 110 pseudogene","termid":"PBO:0062445"}


id: MONDO:1011337
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neurocristopathy that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis, non-human animal","termid":"MONDO:1011313"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurocristopathy, non-human animal","termid":"MONDO:1011337","xrefs":{"Monarch":{"xref_id":"1011337"}}}


id: PBO:0049241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRM8 antisense RNA 1","termid":"PBO:0049241"}


id: GO:0030645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic chemical reactions and pathways resulting in the breakdown of glucose, with the production of acetic acid, butyric acid, carbon dioxide (CO2), and dihydrogen; effected by some saccharolytic species of Clostridium, e.g. C. butyricum.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucose catabolic process","termid":"GO:0006007"},{"relation_name":"is_a","term_name":"fermentation","termid":"GO:0006113"},{"relation_name":"is_a","term_name":"butyrate metabolic process","termid":"GO:0019605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0005975","GO:0006091","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"glucose catabolic process to butyrate","synonyms":[{"name":"butyrate fermentation","type":"exact"},{"name":"glucose fermentation to butyrate","type":"exact"}],"termid":"GO:0030645"}


id: GO:0004197
data:
  {"annotated_genes":["SJAG_03292","SJAG_01283","SJAG_02214","SJAG_03672","SJAG_00135","SJAG_16454","SJAG_02542"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72486,75901,78759],"is_not":false,"summary":null,"term":"GO:0004197"},{"annotations":[89245,77091],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003923"},{"annotations":[107966,76612],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070139"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endopeptidase activity","termid":"GO:0004175"},{"relation_name":"is_a","term_name":"cysteine-type peptidase activity","termid":"GO:0008234"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00135":null,"SJAG_01283":null,"SJAG_02214":null,"SJAG_02542":null,"SJAG_03292":null,"SJAG_03672":null,"SJAG_16454":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0008233"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0016787","GO:0008233","GO:0003674"],"is_obsolete":false,"name":"cysteine-type endopeptidase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9684352","Reactome:R-HSA-2130349","Reactome:R-HSA-114252","Reactome:R-HSA-202939","Reactome:R-HSA-201608","Reactome:R-HSA-202947","Reactome:R-HSA-3465448","Reactome:R-HSA-1678981","Reactome:R-HSA-351913","Reactome:R-HSA-1236948","Reactome:R-HSA-201640","Reactome:R-HSA-351936","Reactome:R-HSA-352268","Reactome:R-HSA-5660663","Reactome:R-HSA-9684309","Reactome:R-HSA-201622","Reactome:R-HSA-264871","Reactome:R-HSA-350318","Reactome:R-HSA-351876","Reactome:R-HSA-6814387","Reactome:R-HSA-211190","Reactome:R-HSA-9684340","Reactome:R-HSA-139952","Reactome:R-HSA-350158","Reactome:R-HSA-211651","Reactome:R-HSA-9694377","Reactome:R-HSA-9694601","Reactome:R-HSA-350319","Reactome:R-HSA-448703","Reactome:R-HSA-5681987","Reactome:R-HSA-114261","Reactome:R-HSA-202966","Reactome:R-HSA-9013895","Reactome:R-HSA-9684321","Reactome:R-HSA-9684351","Reactome:R-HSA-9647632","Reactome:R-HSA-9694551","Reactome:R-HSA-9710101","Reactome:R-HSA-201636","Reactome:R-HSA-201603","Reactome:R-HSA-201628","Reactome:R-HSA-264865","Reactome:R-HSA-9693929","Reactome:R-HSA-201611","Reactome:R-HSA-201634","Reactome:R-HSA-201639","Reactome:R-HSA-201629","Reactome:R-HSA-418852","Reactome:R-HSA-5357828","Reactome:R-HSA-201595","Reactome:R-HSA-9694732","Reactome:R-HSA-2028697","Reactome:R-HSA-9694441","Reactome:R-HSA-351877","Reactome:R-HSA-9686088","Reactome:R-HSA-2130706","Reactome:R-HSA-9729741","Reactome:R-HSA-351894","Reactome:R-HSA-2130504","Reactome:R-HSA-351871","Reactome:R-HSA-202969","Reactome:R-HSA-9694338","Reactome:R-HSA-9647999","Reactome:R-HSA-211186","Reactome:R-HSA-350651","Reactome:R-HSA-114259","Reactome:R-HSA-5634228","Reactome:R-HSA-202960","Reactome:R-HSA-351849","Reactome:R-HSA-1678920","Reactome:R-HSA-9684336","Reactome:R-HSA-9694625","Reactome:R-HSA-201630","Reactome:R-HSA-6800797","EC:3.4.22.-","Reactome:R-HSA-139898","Reactome:R-HSA-202967","Reactome:R-HSA-9684273","Reactome:R-HSA-201631","Reactome:R-HSA-351901","Reactome:R-HSA-418846","Reactome:R-HSA-5682377","Reactome:R-HSA-9012556","Reactome:R-HSA-933532","Reactome:R-HSA-9686930","Reactome:R-HSA-201637","Reactome:R-HSA-9697750","Reactome:R-HSA-9647680","Reactome:R-HSA-212552","Reactome:R-HSA-9729704","Reactome:R-HSA-9603534","Reactome:R-HSA-9729730","Reactome:R-HSA-2028692","Reactome:R-HSA-418845","Reactome:R-HSA-2562564","Reactome:R-HSA-2130336","Reactome:R-HSA-202917"],"synonyms":[{"name":"caspase activity","type":"narrow"},{"name":"lysosomal cysteine-type endopeptidase","type":"narrow"},{"name":"metacaspase activity","type":"narrow"},{"name":"thiol endopeptidase activity","type":"exact"}],"termid":"GO:0004197","terms_by_termid":{"GO:0003923":null,"GO:0004197":null,"GO:0070139":null}}


id: MONDO:0017939
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiminicore myopathy","termid":"MONDO:0018948"},{"relation_name":"is_a","term_name":"autosomal recessive titinopathy","termid":"MONDO:0100493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0006025","MONDO:0005336"],"is_obsolete":false,"name":"classic multiminicore myopathy","secondary_identifiers":["Orphanet:324604","UMLS:C5679883","GARD:13661","HP:0003789","MEDGEN:1826166"],"synonyms":[{"name":"classic MmD","type":"broad"},{"name":"classic multiminicore disease","type":"broad"},{"name":"classic multiminicore myopathy","type":"exact"},{"name":"minicore myopathy","type":"related"}],"termid":"MONDO:0017939","xrefs":{"Monarch":{"xref_id":"0017939"}}}


id: GO:0008757
data:
  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id: GO:0098850
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id: FYPO:0000009
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id: PBO:0000390
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id: PBO:0054888
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id: GO:0070347
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id: GO:0034131
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id: SO:0002298
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id: FYPO:0001455
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id: PR:O94416
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id: PBO:0054385
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id: MONDO:0009778
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id: PR:O74736
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id: GO:0106183
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id: PBO:0067573
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id: GO:1902025
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id: GO:0052078
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id: MONDO:0000527
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id: GO:0052599
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: N-methylputrescine + H2O + O2 = N-methylaminobutanal + NH3 + hydrogen peroxide + H+.","definition_xrefs":["PMID:24287136","PMID:17283012"],"gene_count":0,"genotype_count":0,"name":"obsolete methylputrescine oxidase activity (obsolete GO:0052599)","termid":"GO:0052599"}


id: PBO:0047378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 9","termid":"PBO:0047378"}


id: FYPO:0003788
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the nuclear envelope has one or more extensions that protrude into the cytoplasm during mitosis.","definition_xrefs":["PMID:25103238","PMID:17486116","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear envelope morphology during mitosis","termid":"FYPO:0003779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0002403","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"nuclear envelope protrusion present during mitosis","synonyms":[{"name":"nuclear envelope deformation during mitosis","type":"related"},{"name":"nuclear envelope protrusion present during mitotic M phase","type":"related"},{"name":"nuclear envelope protrusion present during mitotic cell cycle","type":"related"},{"name":"nuclear envelope protrusion present during mitotic nuclear division","type":"exact"},{"name":"nuclear envelope protrusion present during vegetative growth","type":"exact"},{"name":"protruding nuclear envelope during mitosis","type":"exact"}],"termid":"FYPO:0003788"}


id: MONDO:0008481
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spondylosis, cervical","secondary_identifiers":["OMIM:184300","SCTID:387800004","UMLS:C1384641","MEDGEN:235174","EFO:0009610"],"synonyms":[{"name":"spondylosis, cervical","type":"exact"}],"termid":"MONDO:0008481","xrefs":{"Monarch":{"xref_id":"0008481"}}}


id: GO:0090496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of mesenchymal tissue that contributes to the formation of a limb bud.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchyme migration","termid":"GO:0090131"},{"relation_name":"part_of","term_name":"limb bud formation","termid":"GO:0060174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchyme migration involved in limb bud formation","termid":"GO:0090496"}


id: PBO:0049169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRB2 related adaptor protein like","termid":"PBO:0049169"}


id: PBO:0057762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 2052","termid":"PBO:0057762"}


id: GO:0070514
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transcription factor complex that contains the serum response factor (SRF) and the basic helix-loop-helix proteins myogenin and E12, and is involved in activating transcription of muscle-specific genes.","definition_xrefs":["PMID:8617811"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"SRF-myogenin-E12 complex","termid":"GO:0070514"}


id: GO:0007443
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the Malpighian tubule are generated and organized. This process takes place entirely during the embryonic phase. A Malpighian tubule is a fine, thin-walled excretory tubule in insects which leads into the posterior part of the gut.","definition_xrefs":["GOC:bf","ISBN:0582227089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"is_a","term_name":"renal tubule morphogenesis","termid":"GO:0061333"},{"relation_name":"part_of","term_name":"embryonic hindgut morphogenesis","termid":"GO:0048619"},{"relation_name":"part_of","term_name":"Malpighian tubule development","termid":"GO:0072002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Malpighian tubule morphogenesis","termid":"GO:0007443"}


id: PBO:0014607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase, PP4 complex subunit Pph3 (predicted)","termid":"PBO:0014607"}


id: PBO:0083049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deubiquitinating enzyme anchored to the outer mitochondrial membrane; probably not important for general mitochondrial functioning, but may perform a more specialized function at mitochondria","termid":"PBO:0083049"}


id: PBO:0082239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-SNAP cochaperone; SNARE-complex adaptor for Sec18 (NSF) during the disassembly of postfusion cis-SNARE complexes; stimulates the ATPase activity of Sec18p; peripheral membrane protein required for vesicular transport between ER and Golgi, the 'priming' step in homotypic vacuole fusion, and autophagy; similar to mammalian alpha-SNAP","termid":"PBO:0082239"}


id: MONDO:0010989
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mayer-Rokitansky-Küster-Hauser (MRKH) syndrome type 2, a form of MRKH syndrome, is characterized by congenital aplasia of the uterus and upper 2/3 of the vagina that is associated with at least one other malformation such as renal, vertebral, or, less commonly, auditory and cardiac defects. The acronym MURCS (MCllerian duct aplasia, Renal dysplasia, Cervical Somite anomalies) is also used.","definition_xrefs":["Orphanet:2578"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Mayer-Rokitansky-Kuster-Hauser syndrome","termid":"MONDO:0017771"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mayer-Rokitansky-Küster-Hauser syndrome type 2","secondary_identifiers":["DOID:0112179","GARD:5513","OMIM:601076","icd11.foundation:1521808255","MEDGEN:931237","SCTID:717705004","UMLS:C4305568"],"synonyms":[{"name":"Klippel-Feil deformity, conductive deafness, and absent vagina","type":"related"},{"name":"MRKH syndrome type 2","type":"exact"},{"name":"MRKH, type 2","type":"related"},{"name":"MULLERIAN duct aplasia, unilateral renal agenesis, and cervicothoracic somite anomalies","type":"related"},{"name":"MURCS","type":"related"},{"name":"MURCS association","type":"exact"},{"name":"Mayer-Rokitansky-Kuster-Hauser syndrome, type 2","type":"related"},{"name":"Mayer-Rokitansky-Küster-Hauser syndrome type 2","type":"exact"},{"name":"Mullerian duct aplasia-renal dysplasia-cervical somite anomalies syndrome","type":"exact"},{"name":"Müllerian duct aplasia-renal dysplasia-cervical somite anomalies syndrome","type":"exact"},{"name":"atypical MRKH syndrome","type":"exact"}],"termid":"MONDO:0010989","xrefs":{"Monarch":{"xref_id":"0010989"}}}


id: PBO:0039514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 30B pseudogene 2","termid":"PBO:0039514"}


id: GO:0021761
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the limbic system over time from its initial formation until its mature state. The limbic system is a collection of structures in the brain involved in emotion, motivation and emotional aspects of memory.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:jid","ISBN:0878937420","GOC:dph","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system development","termid":"GO:0048731"},{"relation_name":"part_of","term_name":"forebrain development","termid":"GO:0030900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"limbic system development","termid":"GO:0021761"}


id: PR:P27638
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spk1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P27638"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase spk1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31G5.09c","synonyms":[{"name":"MAP kinase spk1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"MAPK (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-spk1","type":"exact"}],"termid":"PR:P27638"}


id: GO:0047402
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + protein alpha-D-glucosyl-1,2-beta-D-galactosyl-L-hydroxylysine = protein beta-D-galactosyl-L-hydroxylysine + beta-D-glucose. The enzyme specifically hydrolyzes glucose from alpha-D-glucosyl- (1->2)-beta-D-galactosyl disaccharide units that are linked to hydroxylysine residues of collagen and collagen-like proteins.","definition_xrefs":["MetaCyc:3.2.1.107-RXN","EC:3.2.1.107"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosidase activity","termid":"GO:0015926"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0140096","GO:0016798","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"protein-glucosylgalactosylhydroxylysine glucosidase activity","secondary_identifiers":["RHEA:11068"],"synonyms":[{"name":"2-O-alpha-D-glucopyranosyl-5-O-alpha-D-galactopyranosylhydroxy-L-lysine glucohydrolase activity","type":"related"},{"name":"protein-alpha-D-glucosyl-1,2-beta-D-galactosyl-L-hydroxylysine glucohydrolase activity","type":"related"}],"termid":"GO:0047402"}


id: GO:1900197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of penicillin biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of penicillin metabolic process","termid":"GO:0033245"},{"relation_name":"is_a","term_name":"regulation of penicillin biosynthetic process","termid":"GO:1900196"},{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"negatively_regulates","term_name":"penicillin biosynthetic process","termid":"GO:0042318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"negatively_regulates","termid":"GO:0006790"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006790","GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"negative regulation of penicillin biosynthetic process","synonyms":[{"name":"down regulation of penicillin anabolism","type":"exact"},{"name":"down regulation of penicillin biosynthesis","type":"exact"},{"name":"down regulation of penicillin biosynthetic process","type":"exact"},{"name":"down regulation of penicillin formation","type":"exact"},{"name":"down regulation of penicillin synthesis","type":"exact"},{"name":"down-regulation of penicillin anabolism","type":"exact"},{"name":"down-regulation of penicillin biosynthesis","type":"exact"},{"name":"down-regulation of penicillin biosynthetic process","type":"exact"},{"name":"down-regulation of penicillin formation","type":"exact"},{"name":"down-regulation of penicillin synthesis","type":"exact"},{"name":"downregulation of penicillin anabolism","type":"exact"},{"name":"downregulation of penicillin biosynthesis","type":"exact"},{"name":"downregulation of penicillin biosynthetic process","type":"exact"},{"name":"downregulation of penicillin formation","type":"exact"},{"name":"downregulation of penicillin synthesis","type":"exact"},{"name":"inhibition of penicillin anabolism","type":"exact"},{"name":"inhibition of penicillin biosynthesis","type":"exact"},{"name":"inhibition of penicillin biosynthetic process","type":"narrow"},{"name":"inhibition of penicillin formation","type":"exact"},{"name":"inhibition of penicillin synthesis","type":"exact"},{"name":"negative regulation of penicillin anabolism","type":"exact"},{"name":"negative regulation of penicillin biosynthesis","type":"exact"},{"name":"negative regulation of penicillin formation","type":"exact"},{"name":"negative regulation of penicillin synthesis","type":"exact"}],"termid":"GO:1900197"}


id: MONDO:0014187
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial thoracic aortic aneurysm and aortic dissection in which the cause of the disease is a mutation in the PRKG1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial thoracic aortic aneurysm and aortic dissection","termid":"MONDO:0019625"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aortic aneurysm, familial thoracic 8","secondary_identifiers":["OMIM:615436","GARD:15966","MEDGEN:815843","UMLS:C3809513"],"synonyms":[{"name":"AAT8","type":"related"},{"name":"PRKG1 familial thoracic aortic aneurysm and aortic dissection","type":"exact"},{"name":"aortic aneurysm, familial thoracic 8","type":"exact"},{"name":"aortic aneurysm, familial thoracic type 8","type":"exact"},{"name":"familial thoracic aortic aneurysm and aortic dissection caused by mutation in PRKG1","type":"exact"}],"termid":"MONDO:0014187","xrefs":{"Monarch":{"xref_id":"0014187"}}}


id: GO:0019693
data:
  {"annotated_genes":["SJAG_04634","SJAG_02564","SJAG_MIT37","SJAG_02887","SJAG_00044","SJAG_04870","SJAG_03708","SJAG_06621","SJAG_02009","SJAG_MIT09","SJAG_05024","SJAG_06622","SJAG_04882","SJAG_00136","SJAG_04970","SJAG_03660","SJAG_01859","SJAG_04495","SJAG_00985","SJAG_04123","SJAG_01070","SJAG_03811","SJAG_01310","SJAG_04709","SJAG_03925","SJAG_03373","SJAG_00964","SJAG_00027","SJAG_00836","SJAG_02135","SJAG_00533","SJAG_00133","SJAG_02785","SJAG_06634","SJAG_03114","SJAG_04713","SJAG_01471","SJAG_02796","SJAG_00197","SJAG_03903","SJAG_04048","SJAG_04334","SJAG_00461","SJAG_01298","SJAG_00438","SJAG_03759","SJAG_03676","SJAG_01937","SJAG_00685","SJAG_04422","SJAG_01081","SJAG_02364","SJAG_02369","SJAG_00915","SJAG_02107","SJAG_02850","SJAG_02038","SJAG_04665","SJAG_04849","SJAG_02481","SJAG_05314","SJAG_04354","SJAG_02945","SJAG_03140","SJAG_04192","SJAG_00779","SJAG_04681","SJAG_01814","SJAG_03164","SJAG_04122","SJAG_00542","SJAG_07003","SJAG_02105","SJAG_03355","SJAG_04845","SJAG_MIT15","SJAG_03977","SJAG_03828","SJAG_00885","SJAG_05204","SJAG_02598","SJAG_00444","SJAG_00694","SJAG_01661","SJAG_00605","SJAG_00839"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75709],"is_not":false,"summary":null,"term":"GO:0019693"},{"annotations":[80706,78728],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044208"},{"annotations":[64193],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044210"},{"annotations":[57215,66803,73333,58353,60564,65440,78503,71662],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006189"},{"annotations":[59858,57334,59484,61710,62707],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044205"},{"annotations":[64435,74163,75610],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006015"},{"annotations":[81008],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901911"},{"annotations":[73640],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006172"},{"annotations":[78141,59838],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046033"},{"annotations":[57366,75680],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044209"},{"annotations":[59839,68972,68892],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046034"},{"annotations":[118239],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006198"},{"annotations":[107284,79584,107283,111241,111240,111243,111237,107282,111239,111242,74174,107652,107653,96339,118210,99808,100079,111238,105204,105461],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[82169],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046705"},{"annotations":[109090,94250],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046704"},{"annotations":[69603],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009224"},{"annotations":[65646],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006241"},{"annotations":[78197],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046036"},{"annotations":[69605,94784],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044211"},{"annotations":[74584],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009398"},{"annotations":[115972],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046444"},{"annotations":[65368],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046710"},{"annotations":[90422],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[59857,63912],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006177"},{"annotations":[65367],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046037"},{"annotations":[77381,103014],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032263"},{"annotations":[65644,76647,104057],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006183"},{"annotations":[80707],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046040"},{"annotations":[65953,77382],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032264"},{"annotations":[77883,74826],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[119870],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905707"},{"annotations":[110631,95682,120957,103638,109739,95093,106843,96662,120945,105473,109647,105499,120951,90944,94667,117707,104859],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042776"},{"annotations":[71755],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006110"},{"annotations":[76014],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046390"},{"annotations":[82168],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006225"},{"annotations":[78196],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chemical reactions and pathways involving ribose phosphate, any phosphorylated ribose sugar.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":86,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00044":null,"SJAG_00133":null,"SJAG_00136":null,"SJAG_00197":null,"SJAG_00438":null,"SJAG_00444":null,"SJAG_00461":null,"SJAG_00533":null,"SJAG_00542":null,"SJAG_00605":null,"SJAG_00685":null,"SJAG_00694":null,"SJAG_00779":null,"SJAG_00836":null,"SJAG_00839":null,"SJAG_00885":null,"SJAG_00915":null,"SJAG_00964":null,"SJAG_00985":null,"SJAG_01070":null,"SJAG_01081":null,"SJAG_01298":null,"SJAG_01310":null,"SJAG_01471":null,"SJAG_01661":null,"SJAG_01814":null,"SJAG_01859":null,"SJAG_01937":null,"SJAG_02009":null,"SJAG_02038":null,"SJAG_02105":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02364":null,"SJAG_02369":null,"SJAG_02481":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_02785":null,"SJAG_02796":null,"SJAG_02850":null,"SJAG_02887":null,"SJAG_02945":null,"SJAG_03114":null,"SJAG_03140":null,"SJAG_03164":null,"SJAG_03355":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03676":null,"SJAG_03708":null,"SJAG_03759":null,"SJAG_03811":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_03925":null,"SJAG_03977":null,"SJAG_04048":null,"SJAG_04122":null,"SJAG_04123":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04354":null,"SJAG_04422":null,"SJAG_04495":null,"SJAG_04634":null,"SJAG_04665":null,"SJAG_04681":null,"SJAG_04709":null,"SJAG_04713":null,"SJAG_04845":null,"SJAG_04849":null,"SJAG_04870":null,"SJAG_04882":null,"SJAG_04970":null,"SJAG_05024":null,"SJAG_05204":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null,"SJAG_06634":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ribose phosphate metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null},"synonyms":[{"name":"ribose phosphate metabolism","type":"exact"}],"termid":"GO:0019693","terms_by_termid":{"GO:0006015":null,"GO:0006110":null,"GO:0006172":null,"GO:0006177":null,"GO:0006183":null,"GO:0006189":null,"GO:0006198":null,"GO:0006225":null,"GO:0006228":null,"GO:0006241":null,"GO:0006256":null,"GO:0009224":null,"GO:0009398":null,"GO:0019693":null,"GO:0032263":null,"GO:0032264":null,"GO:0032265":null,"GO:0042776":null,"GO:0044205":null,"GO:0044206":null,"GO:0044208":null,"GO:0044209":null,"GO:0044210":null,"GO:0044211":null,"GO:0045820":null,"GO:0046033":null,"GO:0046034":null,"GO:0046036":null,"GO:0046037":null,"GO:0046040":null,"GO:0046390":null,"GO:0046444":null,"GO:0046704":null,"GO:0046705":null,"GO:0046710":null,"GO:0061613":null,"GO:0061621":null,"GO:1901911":null,"GO:1905707":null}}


id: MONDO:0018042
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete immunodeficiency syndrome with abnormal pigmentation (obsolete MONDO:0018042)","secondary_identifiers":["Orphanet:331249","icd11.foundation:2015243510"],"synonyms":[{"name":"immunodeficiency syndrome with hypopigmentation","type":"related"}],"termid":"MONDO:0018042","xrefs":{"Monarch":{"xref_id":"0018042"}}}


id: PBO:0066123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras association domain family member 3","termid":"PBO:0066123"}


id: MONDO:0002505
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An astrocytic tumor appearing before the age of twenty one without designation of benign or malignant nor designated location.","definition_xrefs":["NCIT:C9022"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"astrocytoma (excluding glioblastoma)","termid":"MONDO:0019781"},{"relation_name":"is_a","term_name":"childhood neoplasm","termid":"MONDO:0021079"},{"relation_name":"is_a","term_name":"astrocytic tumor","termid":"MONDO:0021636"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"childhood astrocytic tumor","secondary_identifiers":["UMLS:C1321865","DOID:3079","MEDGEN:272112"],"synonyms":[{"name":"astrocytic tumor","type":"broad"},{"name":"astrocytic tumor of childhood","type":"exact"},{"name":"astrocytic tumors, childhood","type":"exact"},{"name":"astrocytic tumour","type":"broad"},{"name":"astrocytic tumour of childhood","type":"exact"},{"name":"childhood astrocytic neoplasm","type":"exact"},{"name":"childhood astrocytic tumor","type":"exact"},{"name":"juvenile astrocytoma","type":"exact"},{"name":"juvenile astrocytoma (morphologic abnormality)","type":"exact"},{"name":"paediatric astrocytic neoplasm","type":"exact"},{"name":"paediatric astrocytic tumour","type":"exact"},{"name":"paediatric astrocytoma","type":"exact"},{"name":"pediatric astrocytic neoplasm","type":"exact"},{"name":"pediatric astrocytic tumor","type":"exact"},{"name":"pediatric astrocytoma","type":"exact"}],"termid":"MONDO:0002505","xrefs":{"Monarch":{"xref_id":"0002505"}}}


id: PBO:0062235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily B member 19 pseudogene","termid":"PBO:0062235"}


id: PBO:0089249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shelterin complex subunit Taz1","termid":"PBO:0089249"}


id: PBO:0043111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHUK divergent transcript","termid":"PBO:0043111"}


id: PBO:0112992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Adaptor protein for various signaling pathways; involved in the mating response, invasive/filamentous growth and osmotolerance; acts as an adaptor that links the G protein-associated Cdc42p-Ste20p complex to the effector Ste11p to modulate signal transduction; localizes to cortical patches at the site of shmoo initiation, facilitating polarity establishment, and remaining at the shmoo tip during mating","termid":"PBO:0112992"}


id: PATO:0001419
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's terminating in a point or edge.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sharpness","termid":"PATO:0000944"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sharp","termid":"PATO:0001419"}


id: MONDO:0011029
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myeloid tumor suppressor","secondary_identifiers":["MEDGEN:318644","OMIM:601308","UMLS:C1832510"],"synonyms":[{"name":"myeloid leukemia-related locus","type":"related"},{"name":"myeloid tumor suppressor","type":"exact"}],"termid":"MONDO:0011029","xrefs":{"Monarch":{"xref_id":"0011029"}}}


id: MONDO:0001997
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Resorption in which cementum or dentin is lost from the root of a tooth owing to cementoclastic or osteoclastic activity in conditions such as trauma of occlusion or neoplasms. (Dorland, 27th ed)","definition_xrefs":["MESH:D012391"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tooth resorption","termid":"MONDO:0001670"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"root resorption","secondary_identifiers":["DOID:14550","MEDGEN:11268","UMLS:C0035851"],"termid":"MONDO:0001997","xrefs":{"Monarch":{"xref_id":"0001997"}}}


id: GO:0010868
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of triglyceride biosynthesis. Triglyceride biosynthesis is the collection of chemical reactions and pathways resulting in the formation of triglyceride, any triester of glycerol.","definition_xrefs":["GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of triglyceride biosynthetic process","termid":"GO:0010866"},{"relation_name":"is_a","term_name":"negative regulation of lipid biosynthetic process","termid":"GO:0051055"},{"relation_name":"is_a","term_name":"negative regulation of triglyceride metabolic process","termid":"GO:0090209"},{"relation_name":"negatively_regulates","term_name":"triglyceride biosynthetic process","termid":"GO:0019432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"negative regulation of triglyceride biosynthetic process","synonyms":[{"name":"negative regulation of triacylglycerol biosynthetic process","type":"exact"}],"termid":"GO:0010868"}


id: GO:0039669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The uptake of a virus into a host cell which occurs via retraction of the viral-bound pilus to bring the virus in contact with the host cell membrane, followed by fusion of the bacteriophage membrane with the host outer membrane.","definition_xrefs":["PMID:20427561","VZ:981","GOC:jl","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete viral entry into host cell via pilus retraction and membrane fusion (obsolete GO:0039669)","termid":"GO:0039669"}


id: GO:0052797
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [X]-4-O-methyl-D-glucuronic acid + H2O = [X]-OH + methyl-D-glucuronic acid. This reaction is the hydrolysis of the ester linkage between 4-O-methyl-D-glucuronic acid (MeGlcA) and an alcohol (-OH) group attached to a molecule, denoted here as [X].","definition_xrefs":["GOC:mengo_curators","PMID:16876163"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"4-O-methyl-glucuronoyl methylesterase activity","synonyms":[{"name":"glucuronoyl esterase activity","type":"broad"}],"termid":"GO:0052797"}


id: GO:0003278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process that contributes to the shaping of the heart.","definition_xrefs":["GOC:mtg_heart","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process involved in morphogenesis","termid":"GO:0060561"},{"relation_name":"part_of","term_name":"heart morphogenesis","termid":"GO:0003007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apoptotic process involved in heart morphogenesis","synonyms":[{"name":"apoptosis involved in heart morphogenesis","type":"narrow"}],"termid":"GO:0003278"}


id: MONDO:0859161
data:
  {"annotated_genes":["SJAG_02488"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88334],"is_not":false,"summary":null,"term":"MONDO:0859161"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02488":null},"genotype_count":0,"is_obsolete":false,"name":"onychodystrophy, osteodystrophy, impaired intellectual development, and seizures syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1788511","UMLS:C5543496","OMIM:619356"],"termid":"MONDO:0859161","terms_by_termid":{"MONDO:0859161":null},"xrefs":{"Monarch":{"xref_id":"0859161"}}}


id: PBO:0018198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome assembly chaperone (predicted)","termid":"PBO:0018198"}


id: GO:0050913
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required to receive a bitter taste stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception of taste","termid":"GO:0050909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of bitter taste","synonyms":[{"name":"bitter taste perception","type":"exact"}],"termid":"GO:0050913"}


id: PBO:0028928
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_septum_orientation","termid":"PBO:0028928"}


id: MONDO:0100052
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Periodic spells of incoordination and imbalance, that is, episodes of ataxia typically lasting from 10 minutes to several hours or days, with improvement upon therapy with acetazolamide.","definition_xrefs":["PMID:23677664"],"gene_count":0,"genotype_count":0,"name":"obsolete acetazolamide-responsive hereditary episodic ataxia (obsolete MONDO:0100052)","termid":"MONDO:0100052","xrefs":{"Monarch":{"xref_id":"0100052"}}}


id: MONDO:0007392
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Coxoauricular syndrome is an extremely rare primary bone defect, described only in a mother and her three daughters to date, characterized by short stature, hip dislocation, minor vertebral and pelvic changes, and microtia with hearing loss. There have been no further descriptions in the literature since 1981.","definition_xrefs":["Orphanet:1508"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with multiple joint dislocations (obsolete MONDO:0019700)","termid":"MONDO:0019700"},{"relation_name":"is_a","term_name":"bone disorder","termid":"MONDO:0005381"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coxoauricular syndrome","secondary_identifiers":["MESH:C565148","UMLS:C1852513","GARD:1558","OMIM:122780","icd11.foundation:649449912","SCTID:732248005","MEDGEN:343827"],"synonyms":[{"name":"coxoauricular syndrome","type":"exact"}],"termid":"MONDO:0007392","xrefs":{"Monarch":{"xref_id":"0007392"}}}


id: GO:0016215
data:
  {"annotated_genes":["SJAG_03943"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76943],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004768"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-CoA + reduced acceptor + O2 = desaturated-acyl-CoA + acceptor + 2 H2O.","definition_xrefs":["PMID:36017969"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03943":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"acyl-CoA desaturase activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"CoA desaturase activity","type":"broad"}],"termid":"GO:0016215","terms_by_termid":{"GO:0004768":null}}


id: FYPO:0004316
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the amount, distribution, or morphology of all or part of the post-anaphase array of microtubules is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton during vegetative growth","termid":"FYPO:0004315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0001985","FYPO:0002399","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abnormal post-anaphase array","synonyms":[{"name":"abnormal post-anaphase array during mitotic cell cycle","type":"related"},{"name":"abnormal post-anaphase array physical object quality during vegetative growth","type":"exact"},{"name":"abnormal post-anaphase microtubule array during vegetative growth","type":"exact"}],"termid":"FYPO:0004316"}


id: GO:1905527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of Golgi lumen acidification.","definition_xrefs":["GO_REF:0000058","PMID:23447592","GOC:TermGenie","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular pH reduction","termid":"GO:0032848"},{"relation_name":"is_a","term_name":"regulation of Golgi lumen acidification","termid":"GO:1905526"},{"relation_name":"negatively_regulates","term_name":"Golgi lumen acidification","termid":"GO:0061795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of Golgi lumen acidification","synonyms":[{"name":"down regulation of Golgi lumen acidification","type":"exact"},{"name":"down-regulation of Golgi lumen acidification","type":"exact"},{"name":"downregulation of Golgi lumen acidification","type":"exact"},{"name":"inhibition of Golgi lumen acidification","type":"narrow"}],"termid":"GO:1905527"}


id: GO:0002594
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of antigen processing and presentation of antigen via MHC class Ib.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antigen processing and presentation","termid":"GO:0002579"},{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation via MHC class Ib","termid":"GO:0002592"},{"relation_name":"positively_regulates","term_name":"antigen processing and presentation via MHC class Ib","termid":"GO:0002475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of antigen processing and presentation via MHC class Ib","synonyms":[{"name":"activation of antigen processing and presentation via MHC class Ib","type":"narrow"},{"name":"stimulation of antigen processing and presentation via MHC class Ib","type":"narrow"},{"name":"up regulation of antigen processing and presentation via MHC class Ib","type":"exact"},{"name":"up-regulation of antigen processing and presentation via MHC class Ib","type":"exact"},{"name":"upregulation of antigen processing and presentation via MHC class Ib","type":"exact"}],"termid":"GO:0002594"}


id: GO:0090102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the cochlea over time from its formation to the mature structure. The cochlea is the snail-shaped portion of the inner ear that is responsible for the detection of sound.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"inner ear development","termid":"GO:0048839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cochlea development","termid":"GO:0090102"}


id: PBO:0051487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IGSF3 pseudogene 2","termid":"PBO:0051487"}


id: PBO:0046409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPCAM divergent transcript","termid":"PBO:0046409"}


id: PBO:0083958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"General amino acid permease; involved in uptake of all L-amino acids, some D-amino acids, related compounds, toxic analogs and polyamines; regulated by nitrogen source; targeted to vacuole for degradation under preferential nitrogen source; essential for invasive growth","termid":"PBO:0083958"}


id: PBO:0012592
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae YPT1","termid":"PBO:0012592"}


id: PBO:0052134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNH1 intronic transcript 1","termid":"PBO:0052134"}


id: FYPO:0006785
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing cobalt ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000139","FYPO:0000257","FYPO:0002057","FYPO:0002060","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on cobalt","synonyms":[{"name":"normal cell population growth in presence of cobalt","type":"exact"},{"name":"normal cell population growth on cobalt","type":"exact"},{"name":"normal cell population growth on cobalt ion","type":"exact"},{"name":"normal cellular response to cobalt","type":"related"},{"name":"normal growth on cobalt ions","type":"exact"},{"name":"normal vegetative cell population growth on cobalt","type":"exact"}],"termid":"FYPO:0006785"}


id: PBO:0084488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific prospore protein; required to produce bending force necessary for proper assembly of the prospore membrane during sporulation; identified as a weak high-copy suppressor of the spo1-1 ts mutation; SPO19 has a paralog, YOR214C, that arose from the whole genome duplication","termid":"PBO:0084488"}


id: _global:negatively_regulated_by
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"inverse of negatively regulates","direct_ancestors":[{"relation_name":"is_a","term_name":"regulated_by","termid":"_global:regulated_by"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negatively_regulated_by","secondary_identifiers":["RO:0002335"],"termid":"_global:negatively_regulated_by"}


id: PBO:0000535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Rok1 (predicted)","termid":"PBO:0000535"}


id: MONDO:0013368
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mammary-digital-nail syndrome is a syndromic limb malformation characterized by congenital onychodystrophy/anonychia, brachydactyly of the fifth finger, digitalization of the thumbs, with absence or hypoplasia of the distal phalanges of the hands and feet in association with juvenile hypertrophy of the breast with gigantomastia in peripubertal females.","definition_xrefs":["Orphanet:238744"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female reproductive system disorder","termid":"MONDO:0002263"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"mammary-digital-nail syndrome","secondary_identifiers":["UMLS:C3150946","SCTID:718679004","GARD:17180","OMIM:613689","MEDGEN:462296"],"synonyms":[{"name":"MDN syndrome","type":"exact"},{"name":"MDNS","type":"related"},{"name":"mammary-digital-nail syndrome","type":"exact"},{"name":"onycho-digito-mammary syndrome","type":"exact"}],"termid":"MONDO:0013368","xrefs":{"Monarch":{"xref_id":"0013368"}}}


id: PBO:0091349
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rec12 is released from double-strand breaks covalently bound to oligonucleotides 17-27 nt long","termid":"PBO:0091349"}


id: PBO:0054929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2343","termid":"PBO:0054929"}


id: PBO:0059900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 23","termid":"PBO:0059900"}


id: PBO:0046235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 29","termid":"PBO:0046235"}


id: SO:0100016
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The central, hydrophobic region of the signal peptide (approx 7-15 aa).","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleaved_peptide_region","termid":"SO:0100011"},{"relation_name":"part_of","term_name":"signal_peptide","termid":"SO:0000418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"central_hydrophobic_region_of_signal_peptide","synonyms":[{"name":"H-region","type":"related"},{"name":"central hydrophobic region of signal peptide","type":"exact"},{"name":"central_hydrophobic_region","type":"related"}],"termid":"SO:0100016"}


id: MONDO:0013543
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trypsinogen deficiency","secondary_identifiers":["SCTID:190953007","UMLS:C0268417","OMIM:614044","ICD9:277.89","MEDGEN:450540"],"synonyms":[{"name":"trypsinogen deficiency","type":"exact"}],"termid":"MONDO:0013543","xrefs":{"Monarch":{"xref_id":"0013543"}}}


id: PBO:0052320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA1210","termid":"PBO:0052320"}


id: PBO:0050969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon omega 1 pseudogene 4","termid":"PBO:0050969"}


id: MONDO:0032792
data:
  {"annotated_genes":["SJAG_01383","SJAG_00252"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88763,88764],"is_not":false,"summary":null,"term":"MONDO:0032792"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary motor and sensory neuropathy type 6","termid":"MONDO:0019551"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00252":null,"SJAG_01383":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"neuropathy, hereditary motor and sensory, type VIc, with optic atrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1680245","UMLS:C5193137","OMIM:618511"],"synonyms":[{"name":"CMT 6C","type":"exact"},{"name":"CMT6C","type":"exact"},{"name":"Charcot-Marie-Tooth Disease, Type 6C","type":"exact"},{"name":"HMSN 6C","type":"exact"},{"name":"HMSN6C","type":"exact"},{"name":"neuropathy, hereditary motor and sensory, type VIc, with optic atrophy","type":"exact"}],"termid":"MONDO:0032792","terms_by_termid":{"MONDO:0032792":null},"xrefs":{"Monarch":{"xref_id":"0032792"}}}


id: PBO:0024473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sec14 cytosolic factor family, glycerophospholipid-transfer protein Spo20/Sec14","termid":"PBO:0024473"}


id: MONDO:0005532
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Crohn's disease affecting the colon.","definition_xrefs":["NCIT:C35211"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Crohn disease","termid":"MONDO:0005011"},{"relation_name":"is_a","term_name":"large intestine disorder","termid":"MONDO:0024634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"Crohn's colitis","secondary_identifiers":["NANDO:1200446","UMLS:C0156147","ICD9:555.1","MEDGEN:57618","DOID:0060192","EFO:0005622"],"synonyms":[{"name":"Crohn colitis","type":"exact"}],"termid":"MONDO:0005532","xrefs":{"Monarch":{"xref_id":"0005532"}}}


id: GO:0047172
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: shikimate + coumaroyl-CoA = 4-coumaroylshikimate + CoA.","definition_xrefs":["EC:2.3.1.133","MetaCyc:2.3.1.133-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-hydroxycinnamoyltransferase activity","termid":"GO:0050737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"shikimate O-hydroxycinnamoyltransferase activity","secondary_identifiers":["RHEA:12124"],"synonyms":[{"name":"4-coumaroyl-CoA:shikimate O-(hydroxycinnamoyl)transferase activity","type":"related"},{"name":"shikimate hydroxycinnamoyltransferase activity","type":"related"}],"termid":"GO:0047172"}


id: MONDO:0023179
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"fragile X syndrome","termid":"MONDO:0010383"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile X syndrome type 2","termid":"MONDO:0023179","xrefs":{"Monarch":{"xref_id":"0023179"}}}


id: GO:0061657
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Isoenergetic transfer of UFM1 from one protein to another via the reaction X-UFM1 + Y = Y-UFM1 + X, where both the X-UFM1 and Y-UFM1 linkages are thioester bonds between the C-terminal amino acid of UFM1 and a sulfhydryl side group of a cysteine residue.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein conjugating enzyme activity","termid":"GO:0061650"},{"relation_name":"is_a","term_name":"UFM1 transferase activity","termid":"GO:0071568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0019787","GO:0003674","GO:0003824","GO:0016740","GO:0140096","GO:0016746"],"is_obsolete":false,"name":"UFM1 conjugating enzyme activity","synonyms":[{"name":"E2","type":"broad"}],"termid":"GO:0061657"}


id: FYPO:0004345
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at long terminal repeats is decreased.","definition_xrefs":["PomBase:mah","PMID:25002536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to chromatin during vegetative growth","termid":"FYPO:0002909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to chromatin at long terminal repeat","synonyms":[{"name":"decreased protein localisation to chromatin at long terminal repeat","type":"exact"},{"name":"decreased protein localization to chromatin at LTR","type":"exact"},{"name":"decreased protein localization to chromatin at long terminal repeat during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to chromatin at long terminal repeat during vegetative growth","type":"exact"},{"name":"reduced protein localization to chromatin at long terminal repeat","type":"exact"}],"termid":"FYPO:0004345"}


id: FYECO:0000281
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which iron trichloride was added to the medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ FeCl3","secondary_identifiers":["PMID:7565608"],"synonyms":[{"name":"iron chloride added","type":"related"},{"name":"iron trichloride added","type":"exact"},{"name":"iron(III) chloride","type":"exact"}],"termid":"FYECO:0000281"}


id: PBO:0068755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5E small nuclear 10, pseudogene","termid":"PBO:0068755"}


id: GO:0008364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Synthesis and deposition of a chitin-based pupal cuticle. At the end of the prepupal period the insect is covered by the pupal cuticle which continues to be elaborated into the pupal period. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:bf","ISBN:0879694238","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cuticle development involved in chitin-based cuticle molting cycle","termid":"GO:0042337"},{"relation_name":"part_of","term_name":"pupal development","termid":"GO:0035209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pupal chitin-based cuticle development","synonyms":[{"name":"pupal cuticle anabolism","type":"broad"},{"name":"pupal cuticle formation","type":"broad"},{"name":"pupal cuticle synthesis","type":"broad"}],"termid":"GO:0008364"}


id: PBO:0047720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flavin containing dimethylaniline monoxygenase 11, pseudogene","termid":"PBO:0047720"}


id: GO:0051801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The killing by an organism of a cell in a second organism by means of the rupture of cell membranes and the loss of cytoplasm, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:add"],"gene_count":0,"genotype_count":0,"name":"obsolete cytolysis in other organism involved in symbiotic interaction (obsolete GO:0051801)","synonyms":[{"name":"cytolysis of cells in other organism during symbiotic interaction","type":"related"},{"name":"cytolysis of cells in other organism involved in symbiotic interaction","type":"exact"}],"termid":"GO:0051801"}


id: FYPO:0006479
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which cohesin loading is abnormal. Cohesin loading is the topological linking of a cohesin ring complex to chromatin.","definition_xrefs":["GO:0071921","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype","termid":"FYPO:0000145"},{"relation_name":"is_a","term_name":"abnormal protein localization","termid":"FYPO:0001370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal cohesin loading","synonyms":[{"name":"abnormal cohesin association with chromatin","type":"exact"},{"name":"abnormal cohesin localisation to chromatin","type":"exact"},{"name":"abnormal cohesin localization to chromatin","type":"exact"}],"termid":"FYPO:0006479"}


id: PBO:0058442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5007","termid":"PBO:0058442"}


id: GO:0022877
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + fructose(out) = protein histidine + fructose phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructose transmembrane transporter activity","termid":"GO:0005353"},{"relation_name":"is_a","term_name":"protein-N(PI)-phosphohistidine-sugar phosphotransferase activity","termid":"GO:0008982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0005215","GO:0016740","GO:0022857","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity","synonyms":[{"name":"fructose PTS transporter activity","type":"exact"}],"termid":"GO:0022877"}


id: MONDO:0017371
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare head and neck neoplasia.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare head and neck tumor (obsolete MONDO:0017371)","secondary_identifiers":["Orphanet:290849"],"synonyms":[{"name":"rare head and neck neoplasia","type":"exact"},{"name":"rare head and neck neoplasm","type":"exact"}],"termid":"MONDO:0017371","xrefs":{"Monarch":{"xref_id":"0017371"}}}


id: FYPO:0000047
data:
  {"alleles_by_uniquename":{"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"},"SJAG_00601:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00601","name":"rip1delta","uniquename":"SJAG_00601:allele-1"},"SJAG_01355:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01355","name":"cox6delta","uniquename":"SJAG_01355:allele-1"},"SJAG_01946:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01946","name":"cem1delta","uniquename":"SJAG_01946:allele-1"},"SJAG_03198:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03198","name":"oar2delta","uniquename":"SJAG_03198:allele-1"},"SJAG_03198:allele-2":{"allele_type":"amino_acid_mutation","description":"Y189D cold sensitive","gene_uniquename":"SJAG_03198","name":"oar2-51","uniquename":"SJAG_03198:allele-2"},"SJAG_03198:allele-3":{"allele_type":"amino_acid_mutation","description":"R72A,L75A,R106A,L109A","gene_uniquename":"SJAG_03198","name":"oar2-dm12","synonyms":[{"name":"destruction box mutations","reference":"PMID:23786411","type":"exact"}],"uniquename":"SJAG_03198:allele-3"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"},"SJAG_03720:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03720","name":"tel1delta","uniquename":"SJAG_03720:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[120997,120998,121001,120999],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000674"}],"single_locus_phenotype":[{"annotations":[121380],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001690"},{"annotations":[121202,121085,121201,121203],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001357"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a population of cells grow normally (i.e. indistinguishably from wild type). 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id: PBO:0018279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Noc2p-Noc3p complex subunit Noc3","termid":"PBO:0018279"}


id: GO:1903656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of type IV pilus biogenesis.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:25049409"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell projection assembly","termid":"GO:0060491"},{"relation_name":"regulates","term_name":"type IV pilus assembly","termid":"GO:0043683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of type IV pilus biogenesis","synonyms":[{"name":"regulation of TFP biogenesis","type":"exact"},{"name":"regulation of type 4 pilus biogenesis","type":"exact"},{"name":"regulation of type IV fimbria assembly","type":"exact"},{"name":"regulation of type IV fimbria biogenesis","type":"exact"},{"name":"regulation of type IV fimbriae assembly","type":"exact"},{"name":"regulation of type IV fimbriae biogenesis","type":"exact"},{"name":"regulation of type IV fimbrial assembly","type":"exact"},{"name":"regulation of type IV fimbrial biogenesis","type":"exact"},{"name":"regulation of type IV fimbrium assembly","type":"exact"},{"name":"regulation of type IV fimbrium biogenesis","type":"exact"},{"name":"regulation of type IV pilus biosynthesis","type":"exact"}],"termid":"GO:1903656"}


id: MONDO:0003924
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that can arise from any of the adrenal cortical layers. It can be associated with the overproduction of glucocorticoids (Cushing's syndrome), androgenic or estrogenic steroids (adrenogenital syndrome), or mineralocorticoids (Conn's syndrome). (Sternberg Diagnostic Surgical Pathology, 3rd ed.)","definition_xrefs":["NCIT:C9003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenoma","termid":"MONDO:0004972"},{"relation_name":"is_a","term_name":"benign neoplasm of adrenal gland","termid":"MONDO:0021511"},{"relation_name":"is_a","term_name":"adrenal cortex neoplasm","termid":"MONDO:0036591"},{"relation_name":"is_a","term_name":"benign epithelial neoplasm","termid":"MONDO:0036976"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adrenal cortex adenoma","secondary_identifiers":["MESH:D018246","ICDO:8370/0","DOID:0050891","EFO:0003104","HP:0008196","HP:0008256","NANDO:2200352","ONCOTREE:ACA","MONDO:0005248","SCTID:302826002","DOID:656","Orphanet:99888","UMLS:C0206667","MEDGEN:61654"],"synonyms":[{"name":"adenoma of adrenal cortex","type":"exact"},{"name":"adenoma of adrenal gland","type":"exact"},{"name":"adenoma of the adrenal cortex","type":"exact"},{"name":"adenoma of the adrenal gland","type":"exact"},{"name":"adenoma, adrenocortical, benign","type":"exact"},{"name":"adrenal adenoma","type":"exact"},{"name":"adrenal cortex adenoma","type":"exact"},{"name":"adrenal cortical adenoma","type":"exact"},{"name":"adrenal gland adenoma","type":"exact"},{"name":"adrenal incidentaloma","type":"related"},{"name":"adrenocortical adenoma","type":"exact"},{"name":"benign adenoma of adrenal gland","type":"exact"},{"name":"benign adenoma of the adrenal gland","type":"exact"},{"name":"benign adrenal adenoma","type":"exact"},{"name":"benign adrenal gland adenoma","type":"exact"},{"name":"cortical cell adenoma","type":"exact"}],"termid":"MONDO:0003924","xrefs":{"Monarch":{"xref_id":"0003924"}}}


id: PBO:0066197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBM15 antisense RNA 1","termid":"PBO:0066197"}


id: GO:0120092
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxybutanoyl-CoA = (2E)-butenoyl-CoA + H2O. (2E)-butenoyl-CoA is also known as crotonoyl-CoA.","definition_xrefs":["RHEA:45584","PMID:28803779"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3-hydroxyacyl-CoA dehydratase activity","termid":"GO:0018812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"crotonyl-CoA hydratase activity","termid":"GO:0120092"}


id: MONDO:0007491
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dystelephalangy","secondary_identifiers":["OMIM:128000","MEDGEN:343690","MESH:C538000","UMLS:C1851955"],"synonyms":[{"name":"Kirner deformity","type":"related"},{"name":"congenital bilateral metadiaphyseal acrodysplasia of the little finger","type":"related"},{"name":"dystelephalangy","type":"exact"}],"termid":"MONDO:0007491","xrefs":{"Monarch":{"xref_id":"0007491"}}}


id: FYPO:0001854
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription occurs to a greater extent than normal during a cellular response to iron ions. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcription during vegetative growth","termid":"FYPO:0000780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000294","FYPO:0006551","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased transcription during cellular response to iron","synonyms":[{"name":"increased transcription during cellular response to iron during mitotic cell cycle","type":"related"},{"name":"increased transcription during cellular response to iron during vegetative growth","type":"exact"},{"name":"increased transcription during cellular response to iron ion","type":"exact"},{"name":"increased transcription during cellular response to iron ions","type":"exact"}],"termid":"FYPO:0001854"}


id: SO:0000129
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is silenced by DNA methylation.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"silenced_by_DNA_methylation","termid":"SO:0000895"},{"relation_name":"is_a","term_name":"gene_silenced_by_DNA_modification","termid":"SO:0000128"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_silenced_by_DNA_methylation","synonyms":[{"name":"gene silenced by DNA methylation","type":"exact"},{"name":"methylation-silenced gene","type":"exact"}],"termid":"SO:0000129"}


id: PBO:0054659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2065","termid":"PBO:0054659"}


id: PR:O14202
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug116 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14202"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 116 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC5D6.10c","synonyms":[{"name":"Spom972h-mug116","type":"exact"}],"termid":"PR:O14202"}


id: MONDO:0001127
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tendinitis that involves the tibialis.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tendinitis","termid":"MONDO:0004857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"tibialis tendinitis","secondary_identifiers":["DOID:10810","SCTID:50127006","MEDGEN:510515","ICD9:726.72","UMLS:C0158321"],"synonyms":[{"name":"tendinitis of tibialis","type":"exact"},{"name":"tibialis tendinitis","type":"exact"}],"termid":"MONDO:0001127","xrefs":{"Monarch":{"xref_id":"0001127"}}}


id: PBO:0002710
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.3.1.71","termid":"PBO:0002710"}


id: MONDO:0044811
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Torsion dystonia for which no underlying cause has been identified.","definition_xrefs":["NCIT:C34564"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dystonic disorder","termid":"MONDO:0003441"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"idiopathic torsion dystonia","secondary_identifiers":["ICD9:333.6","UMLS:C5848258","MEDGEN:1850109","SCTID:22451001"],"synonyms":[{"name":"Idiopathic torsion dystonia","type":"exact"},{"name":"Schwalbe disease","type":"related"},{"name":"Ziehen-oppenheim disease","type":"related"},{"name":"dystonia deformans progressiva","type":"related"},{"name":"dystonia musculorum deformans","type":"related"},{"name":"idiopathic torsion dystonia","type":"exact"},{"name":"primary torsion dystonia","type":"exact"}],"termid":"MONDO:0044811","xrefs":{"Monarch":{"xref_id":"0044811"}}}


id: MONDO:0014516
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any microcephaly and chorioretinopathy in which the cause of the disease is a mutation in the PLK4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microcephaly and chorioretinopathy","termid":"MONDO:0000181"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0006025","MONDO:0005328"],"is_obsolete":false,"name":"microcephaly and chorioretinopathy 2","secondary_identifiers":["DOID:0080106","OMIM:616171","MEDGEN:863825","UMLS:C4015388"],"synonyms":[{"name":"MCCRP2","type":"related"},{"name":"PLK4 microcephaly and chorioretinopathy","type":"exact"},{"name":"microcephaly and chorioretinopathy caused by mutation in PLK4","type":"exact"},{"name":"microcephaly and chorioretinopathy type 2","type":"exact"},{"name":"microcephaly and chorioretinopathy, autosomal recessive, 2","type":"related"},{"name":"microcephaly and chorioretinopathy, autosomal recessive, type 2","type":"exact"}],"termid":"MONDO:0014516","xrefs":{"Monarch":{"xref_id":"0014516"}}}


id: PBO:0031405
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-small_cell","termid":"PBO:0031405"}


id: GO:0018627
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-aminobenzenesulfonate + 2 H+ + NADH + O2 = 2,3-dihydroxybenzenesulfonate + NAD+ + NH4. 2,3-dihydroxybenzenesulfonate is also known as 3-sulfocatechol.","definition_xrefs":["RHEA:23468","EC:1.14.12.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2-aminobenzenesulfonate 2,3-dioxygenase activity","secondary_identifiers":["KEGG_REACTION:R05156","UM-BBD_reactionID:r0218","GO:0018605","MetaCyc:2ASDOSALCAL-RXN"],"synonyms":[{"name":"2-aminobenzenesulfonate dioxygenase activity","type":"exact"},{"name":"2-aminobenzenesulfonate,NADH:oxygen oxidoreductase (2,3-hydroxylating, ammonia-forming)","type":"related"},{"name":"2-aminobenzenesulphonate 2,3-dioxygenase activity","type":"exact"},{"name":"2-aminobenzenesulphonate dioxygenase activity","type":"exact"},{"name":"2-aminosulfobenzene 2,3-dioxygenase activity","type":"related"}],"termid":"GO:0018627"}


id: GO:0042682
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the specification of a cell into a compound eye cone cell.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell fate specification","termid":"GO:0042659"},{"relation_name":"regulates","term_name":"compound eye cone cell fate specification","termid":"GO:0042679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of compound eye cone cell fate specification","secondary_identifiers":["GO:0042681"],"termid":"GO:0042682"}


id: PATO:0000875
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000875 irritable (obsolete PATO:0000875)","termid":"PATO:0000875"}


id: MONDO:0958012
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neurodegeneration with brain iron accumulation","termid":"MONDO:0018307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005066","MONDO:0002039"],"is_obsolete":false,"name":"neurodegeneration with brain iron accumulation 9","secondary_identifiers":["OMIM:620669","UMLS:C5882740","MEDGEN:1845761"],"termid":"MONDO:0958012","xrefs":{"Monarch":{"xref_id":"0958012"}}}


id: GO:0010958
data:
  {"annotated_genes":["SJAG_02605","SJAG_00991","SJAG_03970","SJAG_05346","SJAG_03591"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89904],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905533"},{"annotations":[100694,93560,112391,95142],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905589"},{"annotations":[95143,100695,93561],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905534"},{"annotations":[95144],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905626"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of amino acid import into a cell.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amino acid transmembrane transport","termid":"GO:1903789"},{"relation_name":"regulates","term_name":"amino acid import across plasma membrane","termid":"GO:0089718"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00991":null,"SJAG_02605":null,"SJAG_03591":null,"SJAG_03970":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of amino acid import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of amino acid import","type":"broad"}],"termid":"GO:0010958","terms_by_termid":{"GO:1905533":null,"GO:1905534":null,"GO:1905589":null,"GO:1905626":null}}


id: MONDO:0011112
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Wilms tumor in which the cause of the disease is a mutation in the POU6F2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary Wilms tumor","termid":"MONDO:0003321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0004992"],"is_obsolete":false,"name":"Wilms tumor 5","secondary_identifiers":["OMIM:601583","UMLS:C1832099","MEDGEN:316905","GARD:15336","MESH:C536707"],"synonyms":[{"name":"WT5","type":"related"},{"name":"Wilms tumor 5","type":"exact"},{"name":"Wilms tumor and radial bilateral aplasia","type":"related"},{"name":"Wilms tumor susceptibility-5, autosomal dominant, somatic mutation","type":"exact"},{"name":"Wilms tumor type 5","type":"exact"},{"name":"Wilms tumor, susceptibility to","type":"related"},{"name":"Wilms tumour and radial bilateral aplasia","type":"related"},{"name":"Wilms tumour susceptibility-5, autosomal dominant, somatic mutation","type":"exact"},{"name":"Wilms tumour type 5","type":"exact"},{"name":"bilateral radial aplasia with Wilms tumor","type":"related"},{"name":"bilateral radial aplasia with Wilms tumour","type":"related"}],"termid":"MONDO:0011112","xrefs":{"Monarch":{"xref_id":"0011112"}}}


id: PBO:0079988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 26","termid":"PBO:0079988"}


id: PBO:0005855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-1 adaptor complex gamma subunit Apl4","termid":"PBO:0005855"}


id: PBO:0091301
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcript retaining intron IV represents 15% of total mRNA","termid":"PBO:0091301"}


id: PBO:0050474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox A2","termid":"PBO:0050474"}


id: PBO:0071483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 24","termid":"PBO:0071483"}


id: PBO:0072026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S9 pseudogene 2","termid":"PBO:0072026"}


id: PATO:0001230
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's power or force.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"strength","termid":"PATO:0001230"}


id: GO:0007526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the larval somatic muscle over time, from its formation to the mature structure.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic muscle development","termid":"GO:0007525"},{"relation_name":"part_of","term_name":"larval development","termid":"GO:0002164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"larval somatic muscle development","termid":"GO:0007526"}


id: GO:0042884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of microcin, a class of glycine-rich, bactericidal peptides (antibiotics) produced by some enteric bacteria, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl","PMID:11292337"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide transport","termid":"GO:0042886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"microcin transport","termid":"GO:0042884"}


id: GO:0036508
data:
  {"annotated_genes":["SJAG_01858"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[68180],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904380"}]},"cv_name":"biological_process","definition":"The removal of one or more alpha 1,2-linked mannose residues from a mannosylated protein.","definition_xrefs":["PMID:21062743","GOC:bf","GOC:PARL","PMID:25092655"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein demannosylation","termid":"GO:0036507"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01858":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein alpha-1,2-demannosylation","references_by_uniquename":{"GO_REF:0000002":null},"synonyms":[{"name":"glycoprotein mannose trimming","type":"related"},{"name":"mannose trimming","type":"broad"}],"termid":"GO:0036508","terms_by_termid":{"GO:1904380":null}}


id: MONDO:1011894
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"degenerative encephalopathy, non-human animal","secondary_identifiers":["OMIA:002055"],"termid":"MONDO:1011894","xrefs":{"Monarch":{"xref_id":"1011894"}}}


id: PBO:0085985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; required for efficient 5' processing of mitochondrial tRNAs, for respiratory growth and mitochondrial genome maintenance; null mutation results in a decrease in plasma membrane electron transport; localizes to the matrix side of the inner mitochondrial membrane","termid":"PBO:0085985"}


id: GO:0047760
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + an acid + CoA = AMP + diphosphate + an acyl-CoA.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete butyrate-CoA ligase activity (obsolete GO:0047760)","termid":"GO:0047760"}


id: GO:0033744
data:
  {"annotated_genes":["SJAG_00419"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97383],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036456"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-methionine + thioredoxin disulfide + H2O = L-methionine (S)-S-oxide + thioredoxin.","definition_xrefs":["EC:1.8.4.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor","termid":"GO:0016671"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00419":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"L-methionine:thioredoxin-disulfide S-oxidoreductase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:19993","MetaCyc:1.8.4.13-RXN","KEGG_REACTION:R07606","GO:0000317"],"synonyms":[{"name":"L-methionine-(S)-S-oxide reductase activity","type":"narrow"},{"name":"L-methionine:oxidized-thioredoxin S-oxidoreductase activity","type":"related"},{"name":"acetylmethionine sulfoxide reductase activity","type":"related"},{"name":"fSMsr","type":"related"},{"name":"free-methionine (S)-S-oxide reductase activity","type":"related"},{"name":"methionine sulfoxide reductase activity","type":"broad"},{"name":"methionine-S-oxide reductase activity","type":"exact"},{"name":"methyl sulfoxide reductase I and II activity","type":"related"}],"termid":"GO:0033744","terms_by_termid":{"GO:0036456":null}}


id: MONDO:0005291
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital or acquired aneurysm within the cranium.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral arterial disease","termid":"MONDO:0006693"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain aneurysm","secondary_identifiers":["EFO:0003870","MEDGEN:196706","UMLS:C0751003","DOID:10941","MESH:D002532"],"synonyms":[{"name":"brain aneurysm","type":"exact"},{"name":"intracranial aneurysm","type":"related"}],"termid":"MONDO:0005291","xrefs":{"Monarch":{"xref_id":"0005291"}}}


id: PATO:0001128
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001128 absolute work value (obsolete PATO:0001128)","termid":"PATO:0001128"}


id: GO:0034595
data:
  {"annotated_genes":["SJAG_00063","SJAG_02289","SJAG_04545","SJAG_03375"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110146],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034485"},{"annotations":[75597,75508,76730],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043813"},{"annotations":[76731,77168,75598],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004439"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of the 5-phosphate group of a phosphatidylinositol phosphate.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol phosphate phosphatase activity","termid":"GO:0052866"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00063":null,"SJAG_02289":null,"SJAG_03375":null,"SJAG_04545":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"phosphatidylinositol phosphate 5-phosphatase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"phosphoinositide 5-phosphatase activity","type":"exact"},{"name":"polyphosphoinositol lipid 5-phosphatase activity","type":"exact"}],"termid":"GO:0034595","terms_by_termid":{"GO:0004439":null,"GO:0034485":null,"GO:0043813":null}}


id: PBO:0074201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 39 member 11","termid":"PBO:0074201"}


id: PR:O13612
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nep2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13612"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD8-specific protease 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32H8.02c","synonyms":[{"name":"Spom972h-nep2","type":"exact"},{"name":"meiotically up-regulated gene 120 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13612"}


id: PBO:0048593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth hormone 2","termid":"PBO:0048593"}


id: FYPO:0003521
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of L-ergothioneine measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell","termid":"FYPO:0000991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular L-ergothioneine level","synonyms":[{"name":"decreased L-ergothioneine level","type":"exact"},{"name":"decreased cellular L-ergothioneine accumulation","type":"related"},{"name":"reduced cellular L-ergothioneine level","type":"exact"}],"termid":"FYPO:0003521"}


id: GO:0047726
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ferrocytochrome c + Fe3+ = ferricytochrome c + Fe2+.","definition_xrefs":["EC:1.9.98.1","MetaCyc:IRON--CYTOCHROME-C-REDUCTASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a heme group of donors","termid":"GO:0016675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"iron-cytochrome-c reductase activity","secondary_identifiers":["RHEA:15617"],"synonyms":[{"name":"ferrocytochrome-c:Fe3+ oxidoreductase activity","type":"related"},{"name":"iron-cytochrome c reductase activity","type":"related"}],"termid":"GO:0047726"}


id: MONDO:0004742
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A heterogenous group of degenerative syndromes marked by progressive cerebellar dysfunction either in isolation or combined with other neurologic manifestations. Sporadic and inherited subtypes occur. Inheritance patterns include autosomal dominant, autosomal recessive, and X-linked.","definition_xrefs":["MESH:D013132"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebellar degeneration","termid":"MONDO:0022687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"primary cerebellar degeneration","secondary_identifiers":["DOID:9277","ICD9:334.2","UMLS:C0033132","MEDGEN:19466","SCTID:23732000"],"termid":"MONDO:0004742","xrefs":{"Monarch":{"xref_id":"0004742"}}}


id: PBO:0057280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 501","termid":"PBO:0057280"}


id: PBO:0046901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 24 member B","termid":"PBO:0046901"}


id: GO:0061109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a dense core granule. A dense core granule is a secretory organelle found in endocrine cells.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule organization","termid":"GO:0033363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dense core granule organization","synonyms":[{"name":"dense core granule organisation","type":"exact"}],"termid":"GO:0061109"}


id: PBO:0085880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; interacts weakly with Knr4p; YMR262W is not an essential gene","termid":"PBO:0085880"}


id: PBO:0000398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM23 translocase complex subunit Tim15 (predicted)","termid":"PBO:0000398"}


id: GO:0070111
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A bacteroid-containing symbiosome in which the bacterial component is a genetically highly reduced cyanobacterium that is photosynthetically active and incapable of an independent existence outside its host. The chromatophore functions as a photosynthetic organelle, and has been found and characterized in the amoeba Paulinella chromatophora.","definition_xrefs":["PMID:18356055","GOC:expert_mm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacteroid-containing symbiosome","termid":"GO:0043660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"organellar chromatophore","synonyms":[{"name":"Paulinella-type chromatophore","type":"exact"}],"termid":"GO:0070111"}


id: PBO:0079815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin like with PHD and ring finger domains 2","termid":"PBO:0079815"}


id: PBO:0079508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin pseudogene 6","termid":"PBO:0079508"}


id: PBO:0000886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase gamma subunit Ost3 (predicted)","termid":"PBO:0000886"}


id: GO:1905892
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to thapsigargin.","definition_xrefs":["PMID:21803450","GOC:aruk","GOC:bc","GOC:TermGenie","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cellular response to thapsigargin (obsolete GO:1905892)","synonyms":[{"name":"down regulation of cellular response to thapsigargin","type":"exact"},{"name":"down-regulation of cellular response to thapsigargin","type":"exact"},{"name":"downregulation of cellular response to thapsigargin","type":"exact"},{"name":"inhibition of cellular response to thapsigargin","type":"narrow"}],"termid":"GO:1905892"}


id: FYPO:0007680
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which more ribonucleotides than normal are incorporated into one or both strands during mitotic DNA replication.","definition_xrefs":["PMID:33568651","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic DNA replication","termid":"FYPO:0001343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0000293"],"is_obsolete":false,"name":"increased ribonucleotide incorporation into DNA","termid":"FYPO:0007680"}


id: PBO:0018125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malate dehydrogenase Mdh1 (predicted)","termid":"PBO:0018125"}


id: PBO:0071533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL34 pseudogene 36","termid":"PBO:0071533"}


id: PATO:0001628
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A wholeness quality inhering in a bearer by virtue of the bearer's lacks enough functionality.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sufficiency","termid":"PATO:0001626"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insufficient","synonyms":[{"name":"inadequate ","type":"related"}],"termid":"PATO:0001628"}


id: FYPO:0006939
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which actomyosin contractile ring contraction progresses in a radially asymmetric fashion.","definition_xrefs":["PomBase:mah","PMID:30709916"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring contraction","termid":"FYPO:0001364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000032","FYPO:0001985","FYPO:0005447","FYPO:0000631","FYPO:0001320","FYPO:0004803"],"is_obsolete":false,"name":"asymmetric actomyosin contractile ring contraction","synonyms":[{"name":"asymmetric actomyosin contractile ring contraction during mitotic cell cycle","type":"related"},{"name":"asymmetric actomyosin contractile ring contraction during vegetative growth","type":"exact"},{"name":"non-concentric actomyosin contractile ring contraction","type":"exact"}],"termid":"FYPO:0006939"}


id: MONDO:0016017
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Methimazole embryopathy is a teratogenic embryofetopathy that results from maternal exposition to methimazole (MMI; or the parent compound carbimazole) in the first trimester of pregnancy. MMI is an antithyroid thionamide drug used for the treatment of Graves' disease. In the infant, MMI may result in choanal atresia, esophageal atresia, omphalocele, omphalomesenteric duct anomalies, congenital heart disease (such as ventricular septal defect), renal system malformations and aplasia cutis. Additional features that may be observed include facial dysmorphism (short upslanting palpebral fissures, a broad nasal bridge with a small nose and a broad forehead) and athelia/hypothelia.","definition_xrefs":["Orphanet:1923"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"toxic or drug-related embryofetopathy","termid":"MONDO:0016677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methimazole embryofetopathy","secondary_identifiers":["UMLS:C4510379","MEDGEN:1388574","SCTID:724144006","icd11.foundation:1204409156"],"synonyms":[{"name":"MMI/CMZ embryofetopathy","type":"exact"},{"name":"MMI/CMZ embryopathy","type":"exact"},{"name":"Methimazole antenatal exposure","type":"related"},{"name":"Methimazole/carbimazole embryofetopathy","type":"exact"},{"name":"Methimazole/carbimazole embryopathy","type":"exact"},{"name":"fetal methimazole syndrome","type":"related"},{"name":"foetal methimazole syndrome","type":"related"},{"name":"methimazole embryofetopathy","type":"exact"}],"termid":"MONDO:0016017","xrefs":{"Monarch":{"xref_id":"0016017"}}}


id: PATO:0002522
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer having an elongate structure, similar to a ridge, that extends longitudinally along an anatomical entity.","definition_xrefs":["PATOC:EJS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keel-shaped","termid":"PATO:0002522"}


id: MONDO:0019250
data:
  {"annotated_genes":["SJAG_01881","SJAG_05230","SJAG_04203"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88832],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015005"},{"annotations":[88328],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044330"},{"annotations":[87280],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012407"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01881":null,"SJAG_04203":null,"SJAG_05230":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"inborn disorder of biogenic amine metabolism and transport","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:79214","GARD:18976","MEDGEN:1842301","UMLS:C5681274"],"synonyms":[{"name":"disorder of biogenic amine metabolism and transport","type":"related"}],"termid":"MONDO:0019250","terms_by_termid":{"MONDO:0012407":null,"MONDO:0015005":null,"MONDO:0044330":null},"xrefs":{"Monarch":{"xref_id":"0019250"}}}


id: PBO:0081922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 891","termid":"PBO:0081922"}


id: PR:Q9C108
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAPB1E7.01c gene.","definition_xrefs":["UniProtKB:Q9C108","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein PB1E7.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1E7.01c","synonyms":[{"name":"Spom972h-SPAPB1E7.01c","type":"exact"}],"termid":"PR:Q9C108"}


id: GO:1902760
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of Mo(VI)-molybdopterin cytosine dinucleotide.","definition_xrefs":["GOC:dph","PMID:23201473","GOC:TermGenie","GO_REF:0000068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Mo-molybdopterin cofactor biosynthetic process","termid":"GO:0006777"},{"relation_name":"is_a","term_name":"Mo(VI)-molybdopterin cytosine dinucleotide metabolic process","termid":"GO:1902759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Mo(VI)-molybdopterin cytosine dinucleotide biosynthetic process","secondary_identifiers":["MetaCyc:PWY-6476","GO:0061601"],"synonyms":[{"name":"Mo(VI)-molybdopterin cytosine dinucleotide anabolism","type":"exact"},{"name":"Mo(VI)-molybdopterin cytosine dinucleotide biosynthesis","type":"exact"},{"name":"Mo(VI)-molybdopterin cytosine dinucleotide formation","type":"exact"},{"name":"Mo(VI)-molybdopterin cytosine dinucleotide synthesis","type":"exact"},{"name":"Mo-molybdopterin-cytosine-dinucleotide cofactor biosynthetic process","type":"exact"}],"termid":"GO:1902760"}


id: PBO:0034727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orthologous to S. cereviaie YER035W and YGL222C","termid":"PBO:0034727"}


id: PBO:0003956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucan-alpha-1,4-glucosidase","termid":"PBO:0003956"}


id: PBO:0067205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 270, pseudogene","termid":"PBO:0067205"}


id: PBO:0054924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2338","termid":"PBO:0054924"}


id: PBO:0083552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified gene CSE1","termid":"PBO:0083552"}


id: MONDO:1010912
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Muscular dystrophy that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy, non-human animal","termid":"MONDO:0024965"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscular dystrophy, domestic cat","secondary_identifiers":["OMIA:000679-9685"],"termid":"MONDO:1010912","xrefs":{"Monarch":{"xref_id":"1010912"}}}


id: FYPO:0006087
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which DNA resection does not occur upstream of a stalled replication fork. DNA resection is the 5'-to-3' degradation of one strand of DNA, leaving a stretch of single-stranded DNA.","definition_xrefs":["PMID:28475874","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal replication fork processing","termid":"FYPO:0003586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000293","FYPO:0000002"],"is_obsolete":false,"name":"abolished DNA resection during replication fork processing","synonyms":[{"name":"DNA resection during replication fork processing abolished","type":"exact"},{"name":"abolished DNA resection during replication fork processing during mitotic cell cycle","type":"related"},{"name":"abolished DNA resection during replication fork processing during vegetative growth","type":"exact"},{"name":"abolished DNA resectioning during replication fork processing","type":"exact"},{"name":"abolished exonucleolytic DNA cleavage during replication fork processing","type":"exact"}],"termid":"FYPO:0006087"}


id: MONDO:0030512
data:
  {"annotated_genes":["SJAG_01854"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87874],"is_not":false,"summary":null,"term":"MONDO:0030512"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01854":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"spastic paraplegia 85, autosomal recessive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5562053","DOID:0112345","MEDGEN:1794263","Orphanet:631082","OMIM:619686"],"synonyms":[{"name":"SPG85","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 85","type":"exact"}],"termid":"MONDO:0030512","terms_by_termid":{"MONDO:0030512":null},"xrefs":{"Monarch":{"xref_id":"0030512"}}}


id: PBO:0060849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nei like DNA glycosylase 3","termid":"PBO:0060849"}


id: GO:1990441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of an endoplasmic reticulum stress.","definition_xrefs":["PMID:21113145","GOC:bf","GOC:PARL"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress (obsolete GO:1990441)","synonyms":[{"name":"ER stress-induced negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"down regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress","type":"exact"},{"name":"down-regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress","type":"exact"},{"name":"inhibition of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress","type":"exact"},{"name":"negative regulation of transcription from RNA polymerase II promoter in response to ER stress","type":"exact"},{"name":"reduction of transcription from RNA polymerase II promoter under ER stress","type":"exact"},{"name":"repression of transcription from RNA polymerase II promoter under ER stress","type":"exact"},{"name":"suppression of transcription from RNA polymerase II promoter under ER stress","type":"exact"}],"termid":"GO:1990441"}


id: SO:0002091
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A UTR variant of intronic sequence of the 5' UTR.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5_prime_UTR_variant","termid":"SO:0001623"},{"relation_name":"is_a","term_name":"coding_transcript_intron_variant","termid":"SO:0001969"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5_prime_UTR_intron_variant","synonyms":[{"name":"5 prime UTR intron variant","type":"exact"}],"termid":"SO:0002091"}


id: GO:0103055
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: gibberellin A15 + 2-oxoglutarate + O2 = gibberellin A24 + succinate + carbon dioxide + H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete gibberellin A15, 2-oxoglutarate:oxygen oxidoreductase activity (obsolete GO:0103055)","termid":"GO:0103055"}


id: PBO:0052170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium two pore domain channel subfamily K member 1","termid":"PBO:0052170"}


id: GO:1903576
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a L-arginine stimulus.","definition_xrefs":["GOC:mr","GO_REF:0000071","GOC:TermGenie","PMID:6394628"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to amino acid","termid":"GO:0043200"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to L-arginine","termid":"GO:1903576"}


id: GO:0042289
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a major histocompatibility complex class II molecule; a set of molecules displayed on cell surfaces that are responsible for lymphocyte recognition and antigen presentation.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MHC protein binding","termid":"GO:0042287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"MHC class II protein binding","synonyms":[{"name":"major histocompatibility complex class II binding","type":"exact"},{"name":"major histocompatibility complex class II ligand","type":"narrow"}],"termid":"GO:0042289"}


id: FYPO:0005351
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate or other property of a guanyl-nucleotide exchange factor activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"increased guanyl-nucleotide exchange factor activity","synonyms":[{"name":"increased GEF activity","type":"exact"}],"termid":"FYPO:0005351"}


id: PBO:0040211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASXL3 divergent transcript","termid":"PBO:0040211"}


id: GO:0018462
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-(hydroxymethyl)benzenesulfonate + NAD+ = 4-formylbenzenesulfonate + H+ + NADH.","definition_xrefs":["EC:1.1.1.257","RHEA:24412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"4-(hydroxymethyl)benzenesulfonate dehydrogenase activity","secondary_identifiers":["MetaCyc:SOLDEHYD-RXN","UM-BBD_reactionID:r0291","KEGG_REACTION:R05271"],"synonyms":[{"name":"4-(hydroxymethyl)benzenesulfonate:NAD+ oxidoreductase activity","type":"related"},{"name":"4-(hydroxymethyl)benzenesulphonate dehydrogenase activity","type":"exact"},{"name":"4-sulfobenzyl alcohol dehydrogenase activity","type":"exact"}],"termid":"GO:0018462"}


id: _global:has_functional_parent
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"'Entity A' has_functional_parent 'Entity B' implies that 'Entity B' has at least one chacteristic group from which 'Entity A' can be derived by functional modification.","definition_xrefs":["PubMed:18688235"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_functional_parent","termid":"_global:has_functional_parent"}


id: MONDO:0012377
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"excluded_subClassOf","term_name":"Asperger syndrome","termid":"MONDO:0005259"},{"relation_name":"is_a","term_name":"Asperger syndrome, susceptibility to","termid":"MONDO:0100440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asperger syndrome, susceptibility to, 4","secondary_identifiers":["UMLS:C1864961","MEDGEN:400650","OMIM:609954"],"synonyms":[{"name":"ASPERGER syndrome, susceptibility to, 4","type":"related"},{"name":"ASPG4","type":"exact"},{"name":"Asperger syndrome susceptibility 4","type":"exact"}],"termid":"MONDO:0012377","xrefs":{"Monarch":{"xref_id":"0012377"}}}


id: PATO:0002370
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"The number of time that a viviparous organism has given birth.","definition_xrefs":["wiki:http://en.wikipedia.org/wiki/Parity_(biology)"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive quality","termid":"PATO:0001434"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parity","termid":"PATO:0002370"}


id: PBO:0054749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2159","termid":"PBO:0054749"}


id: PBO:0061261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"notch 2 N-terminal like R","termid":"PBO:0061261"}


id: PATO:0000604
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000604 orientation value (obsolete PATO:0000604)","termid":"PATO:0000604"}


id: PBO:0049700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HUWE1 associated protein modifying stress responses 2","termid":"PBO:0049700"}


id: MONDO:0006364
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A localized or multifocal mesothelioma arising from the peritoneum. It predominantly occurs in women. It is characterized by the formation of papillae, covered by a single layer of blunt mesothelial cells. Mitotic figures are not present. There is no evidence of severe cytologic atypia. It has a relatively favorable clinical outcome, compared to diffuse malignant mesothelioma.","definition_xrefs":["NCIT:C45661"],"direct_ancestors":[{"relation_name":"is_a","term_name":"well differentiated papillary mesothelioma","termid":"MONDO:0003688"},{"relation_name":"is_a","term_name":"peritoneal mesothelioma","termid":"MONDO:0006362"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peritoneal well differentiated papillary mesothelioma","secondary_identifiers":["MEDGEN:318015","UMLS:C1709507","EFO:1000469"],"synonyms":[{"name":"peritoneal WDPM","type":"exact"},{"name":"peritoneal well differentiated papillary mesothelioma","type":"exact"}],"termid":"MONDO:0006364","xrefs":{"Monarch":{"xref_id":"0006364"}}}


id: GO:0036146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a mycotoxin stimulus. A mycotoxin is a toxic chemical substance produced by fungi.","definition_xrefs":["PMID:20548963","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to mycotoxin","termid":"GO:0010046"},{"relation_name":"is_a","term_name":"cellular response to toxic substance","termid":"GO:0097237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to mycotoxin","termid":"GO:0036146"}


id: MONDO:0011724
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Glucose transporter type 1 (GLUT1) deficiency syndrome is characterized by an encephalopathy marked by childhood epilepsy that is refractory to treatment, deceleration of cranial growth leading to microcephaly, psychomotor retardation, spasticity, ataxia, dysarthria and other paroxysmal neurological phenomena often occurring before meals. Symptoms appear between the age of 1 and 4 months, following a normal birth and gestation.","definition_xrefs":["Orphanet:71277"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GLUT1 deficiency syndrome","termid":"MONDO:0000188"},{"relation_name":"is_a","term_name":"glucose transport disorder","termid":"MONDO:0019226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"encephalopathy due to GLUT1 deficiency","secondary_identifiers":["MEDGEN:1645412","OMIM:606777","GARD:9265","DOID:0070561","UMLS:C4551966","NORD:1188","NANDO:1200799","icd11.foundation:1231079185","MESH:C536830","NANDO:2200545"],"synonyms":[{"name":"De Vivo disease","type":"exact"},{"name":"G1D","type":"related"},{"name":"GLUT1 DS","type":"related"},{"name":"GLUT1 deficiency syndrome","type":"related"},{"name":"GLUT1 deficiency syndrome 1","type":"related"},{"name":"GLUT1 deficiency syndrome 1, autosomal recessive","type":"related"},{"name":"GLUT1 deficiency syndrome 1, infantile onset, severe","type":"exact"},{"name":"GLUT1 deficiency syndrome type 1","type":"exact"},{"name":"GLUT1-DS","type":"exact"},{"name":"GLUT1DS1","type":"related"},{"name":"Glucose Transporter Type 1 Deficiency Syndrome","type":"exact"},{"name":"encephalopathy due to GLUT1 deficiency","type":"exact"},{"name":"glucose TRANSPORT defect, blood-brain barrier GLUT1 deficiency syndrome 1, autosomal recessive, included","type":"related"},{"name":"glucose Transport defect, blood-brain barrier","type":"related"},{"name":"glucose transport defect, blood-brain barrier","type":"related"},{"name":"glucose transporter Protein syndrome","type":"related"},{"name":"glucose transporter protein syndrome","type":"related"},{"name":"glucose transporter type 1 deficiency","type":"exact"},{"name":"glucose transporter type 1 deficiency syndrome","type":"related"},{"name":"glucose transporter type1 (glut-1) deficiency","type":"related"},{"name":"glut-1 deficiency syndrome","type":"exact"}],"termid":"MONDO:0011724","xrefs":{"Monarch":{"xref_id":"0011724"}}}


id: PBO:0031048
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_acetylation","termid":"PBO:0031048"}


id: GO:0052789
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of (1->3)-beta-D-mannosidic linkages in mannans, releasing mannose.","definition_xrefs":["GOC:mengo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete mannan 1,3-beta-mannosidase activity (obsolete GO:0052789)","termid":"GO:0052789"}


id: PBO:0044883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENN domain containing 10","termid":"PBO:0044883"}


id: PBO:0040695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"branched chain keto acid dehydrogenase E1 subunit alpha","termid":"PBO:0040695"}


id: PBO:0048601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ghrelin opposite strand/antisense RNA","termid":"PBO:0048601"}


id: GO:0031927
data:
  {"annotated_genes":["SJAG_02962","SJAG_02152","SJAG_03652","SJAG_03808"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91962,91963,119338,120636],"is_not":false,"summary":null,"term":"GO:0031927"}]},"cv_name":"molecular_function","definition":"Enables the transfer of pyridoxamine from one side of a membrane to the other. Pyridoxamine, 4-(aminomethyl)-5-(hydroxymethyl)-2-methylpyridin-3-ol, is one of the vitamin B6 compounds. Pyridoxal, pyridoxamine and pyridoxine are collectively known as vitamin B6, and are efficiently converted to the biologically active form of vitamin B6, pyridoxal phosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02152":null,"SJAG_02962":null,"SJAG_03652":null,"SJAG_03808":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"pyridoxamine transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031927","terms_by_termid":{"GO:0031927":null}}


id: PBO:0069834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1120, pseudogene","termid":"PBO:0069834"}


id: GO:1904813
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any membrane-enclosed lumen that is part of a ficolin-1-rich granule.","definition_xrefs":["GOC:TermGenie","PMID:23650620","GO_REF:0000064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular organelle lumen","termid":"GO:0070013"},{"relation_name":"part_of","term_name":"ficolin-1-rich granule","termid":"GO:0101002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"ficolin-1-rich granule lumen","synonyms":[{"name":"ficolin-1-rich granule membrane-enclosed lumen","type":"exact"},{"name":"membrane-enclosed lumen of ficolin granule","type":"related"},{"name":"membrane-enclosed lumen of ficolin-1 rich granule","type":"exact"},{"name":"membrane-enclosed lumen of ficolin-1-rich granule","type":"exact"}],"termid":"GO:1904813"}


id: FYPO:0006023
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is elongated, has two or more nuclei and more than one septum, and the septa are neither grouped together nor all placed with each septum forming a compartment with a single nucleus. Septa may be present singly or in pairs, and in any location relative to the nuclei.","definition_xrefs":["PMID:11294907","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated multinucleate vegetative cell","termid":"FYPO:0000133"},{"relation_name":"is_a","term_name":"elongated multiseptate vegetative cell","termid":"FYPO:0000223"},{"relation_name":"is_a","term_name":"multinucleate multiseptate vegetative cell","termid":"FYPO:0001252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000005","FYPO:0005447","FYPO:0000631","FYPO:0000032"],"is_obsolete":false,"name":"elongated multinucleate multiseptate vegetative cell, irregular septum position","synonyms":[{"name":"elongated multinucleate multiseptate vegetative cell, irregular septum position during mitotic cell cycle","type":"related"},{"name":"elongated multinucleate multiseptate vegetative cell, irregular septum position during vegetative growth","type":"exact"}],"termid":"FYPO:0006023"}


id: PBO:0059144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"megakaryocyte and platelet inhibitory receptor G6b","termid":"PBO:0059144"}


id: MONDO:0008632
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aquagenic urticaria is a rare condition in which urticaria (hives) develop rapidly after the skin comes in contact with water, regardless of its temperature. It most commonly affects women and symptoms often start around the onset of puberty. Some patients report itching too. It is a form of physical urticaria . The exact underlying cause of aquagenic urticaria is currently unknown. Due to the rarity of the condition, there is very limited data regarding the effectiveness of individual treatments; however, various medications and therapies have been used with variable success.","direct_ancestors":[{"relation_name":"is_a","term_name":"urticaria","termid":"MONDO:0005492"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"urticaria, aquagenic","secondary_identifiers":["UMLS:C0263334","ICD9:708.8","MEDGEN:82663","MESH:C562481","OMIM:191850","SCTID:89870006"],"synonyms":[{"name":"Physical urticaria","type":"exact"},{"name":"aquagenic urticaria","type":"related"},{"name":"urticaria, aquagenic","type":"exact"}],"termid":"MONDO:0008632","xrefs":{"Monarch":{"xref_id":"0008632"}}}


id: GO:0046682
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cyclodiene stimulus. A cyclodiene is any organic insecticide (as dieldrin or chlordane) with a chlorinated methylene group forming a bridge across a 6-membered carbon ring.","definition_xrefs":["ISBN:0877797099"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to insecticide","termid":"GO:0017085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cyclodiene","synonyms":[{"name":"cyclodiene resistance","type":"related"},{"name":"cyclodiene susceptibility/resistance","type":"related"}],"termid":"GO:0046682"}


id: CHEBI:29014
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cordycepin","termid":"CHEBI:29014"}


id: PBO:0039150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AK3 pseudogene 5","termid":"PBO:0039150"}


id: PBO:0013769
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human EXOC1","termid":"PBO:0013769"}


id: PBO:0045932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EFHD2 antisense RNA 1","termid":"PBO:0045932"}


id: PBO:0090046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S29","termid":"PBO:0090046"}


id: PBO:0040927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 2","termid":"PBO:0040927"}


id: MONDO:0010709
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A basal ganglia disorder characterized by Parkinsonian-type symptoms (postural changes, tremor, rigidity), megalencephaly and variable intellectual deficit. Other signs are frontal bossing, persistent frontal lobe reflexes, strabismus and seizures. It has been described in three generations of one family. Transmission is X-linked, and the gene is located on chromosomal region Xq27.3-qter.","definition_xrefs":["Orphanet:2379"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"parkinsonian disorder","termid":"MONDO:0021095"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"early-onset parkinsonism-intellectual disability syndrome","secondary_identifiers":["OMIM:311510","icd11.foundation:937544163","MEDGEN:208674","MESH:C537179","GARD:3203","UMLS:C0796195","DOID:0111781","SCTID:716107009"],"synonyms":[{"name":"BGMR","type":"related"},{"name":"Laxova Brown hogan syndrome","type":"related"},{"name":"Laxova-Opitz syndrome","type":"exact"},{"name":"Parkinsonism, early onset with intellectual disability","type":"related"},{"name":"Parkinsonism, early onset with mental retardation","type":"related"},{"name":"Parkinsonism, early-onset, with intellectual disability","type":"related"},{"name":"Parkinsonism, early-onset, with mental retardation","type":"related"},{"name":"WAISMAN syndrome","type":"related"},{"name":"WSMN","type":"related"},{"name":"Waisman syndrome","type":"exact"},{"name":"Waisman syndrome, X-linked recessive","type":"exact"},{"name":"Wsn","type":"related"},{"name":"X-linked recessive basal ganglia disorder with intellectual disability","type":"related"},{"name":"X-linked recessive basal ganglia disorder with mental retardation","type":"related"},{"name":"basal ganglia disorder with intellectual disability","type":"related"},{"name":"basal ganglia disorder with mental retardation","type":"related"},{"name":"basal ganglion disorder with intellectual disability","type":"related"},{"name":"basal ganglion disorder with mental retardation","type":"related"},{"name":"early-onset parkinsonism-intellectual disability syndrome","type":"exact"}],"termid":"MONDO:0010709","xrefs":{"Monarch":{"xref_id":"0010709"}}}


id: PBO:0068453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 29, pseudogene","termid":"PBO:0068453"}


id: PBO:0029521
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_normal_volume_septated_spheroid_vegetative_cell","termid":"PBO:0029521"}


id: PBO:0061359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 19","termid":"PBO:0061359"}


id: PBO:0016937
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Insulinase Related Protease","termid":"PBO:0016937"}


id: GO:0048681
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of axon regeneration.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:jid","GOC:lm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to external stimulus","termid":"GO:0032102"},{"relation_name":"is_a","term_name":"regulation of axon regeneration","termid":"GO:0048679"},{"relation_name":"is_a","term_name":"negative regulation of neuron projection regeneration","termid":"GO:0070571"},{"relation_name":"is_a","term_name":"negative regulation of response to wounding","termid":"GO:1903035"},{"relation_name":"negatively_regulates","term_name":"axon regeneration","termid":"GO:0031103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of axon regeneration","synonyms":[{"name":"down regulation of axon regeneration","type":"exact"},{"name":"down-regulation of axon regeneration","type":"exact"},{"name":"downregulation of axon regeneration","type":"exact"},{"name":"inhibition of axon regeneration","type":"narrow"}],"termid":"GO:0048681"}


id: MONDO:0009188
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Epilepsy telangiectasia syndrome is characterized by intellectual deficit, epilepsy, palpebral conjunctival telangiectasias and diminished serum IgA, particular facies and a shortened fifth finger. It has been reported in six siblings from a Mexican family. It is probably transmitted as an autosomal recessive trait.","definition_xrefs":["Orphanet:1951"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"epilepsy syndrome","termid":"MONDO:0015650"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy-telangiectasia syndrome","secondary_identifiers":["OMIM:226850","GARD:2168","UMLS:C1856929","MEDGEN:384017","MESH:C535497"],"synonyms":[{"name":"epilepsy telangiectasia","type":"related"},{"name":"epilepsy-telangiectasia","type":"related"},{"name":"intellectual disability, epilepsy, palpebral conjunctival telangiectasias and IgA deficiency","type":"related"},{"name":"mental retardation, epilepsy, palpebral conjunctival telangiectasias and IgA deficiency","type":"related"}],"termid":"MONDO:0009188","xrefs":{"Monarch":{"xref_id":"0009188"}}}


id: GO:0048482
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the ovule are generated and organized. The ovule is the structure in seed plants enclosing the female gametophyte, and is composed of the nucellus, one or two integuments, and the funiculus; it develops into the seed.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"post-embryonic plant morphogenesis","termid":"GO:0090698"},{"relation_name":"is_a","term_name":"plant organ morphogenesis","termid":"GO:1905392"},{"relation_name":"part_of","term_name":"carpel morphogenesis","termid":"GO:0048445"},{"relation_name":"part_of","term_name":"plant ovule development","termid":"GO:0048481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plant ovule morphogenesis","termid":"GO:0048482"}


id: PBO:0091388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosome assembly protein Rrg9","termid":"PBO:0091388"}


id: PBO:0071183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 24","termid":"PBO:0071183"}


id: GO:0002450
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a B cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex.","definition_xrefs":["ISBN:0781735149","GOC:add","PMID:15771591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation","termid":"GO:0019882"},{"relation_name":"part_of","term_name":"B cell mediated immunity","termid":"GO:0019724"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell antigen processing and presentation","synonyms":[{"name":"B lymphocyte antigen processing and presentation","type":"exact"},{"name":"B-cell antigen processing and presentation","type":"exact"},{"name":"B-lymphocyte antigen processing and presentation","type":"exact"}],"termid":"GO:0002450"}


id: PBO:0088840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vaculoar proteinase B inhibitor Pbi2","termid":"PBO:0088840"}


id: PBO:0017497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MatE family transmembrane transporter (predicted)","termid":"PBO:0017497"}


id: SO:0002168
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An RNA_thermometer is a cis element in the 5' end of an mRNA that can change its secondary structure in response to temperature and coordinate temperature-dependent gene expression.","definition_xrefs":["PMID:22421878"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA_region","termid":"SO:0000836"},{"relation_name":"part_of","term_name":"mRNA","termid":"SO:0000234"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA_thermometer","secondary_identifiers":["https://en.wikipedia.org/wiki/RNA_thermometer"],"synonyms":[{"name":"RNA thermometer","type":"exact"},{"name":"RNA thermoregulator","type":"exact"},{"name":"RNAT","type":"exact"},{"name":"thermoregulator","type":"exact"}],"termid":"SO:0002168"}


id: GO:0046354
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of mannan, the main hemicellulose of soft (coniferous) wood, made up of D-mannose, D-glucose and D-galactose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannan metabolic process","termid":"GO:0010412"},{"relation_name":"is_a","term_name":"cell wall polysaccharide biosynthetic process","termid":"GO:0070592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0071554"],"is_obsolete":false,"name":"mannan biosynthetic process","synonyms":[{"name":"mannan anabolism","type":"exact"},{"name":"mannan biosynthesis","type":"exact"},{"name":"mannan formation","type":"exact"},{"name":"mannan synthesis","type":"exact"}],"termid":"GO:0046354"}


id: PBO:0053109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine carboxyl methyltransferase 1","termid":"PBO:0053109"}


id: GO:0051191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a prosthetic group, the non-amino acid portion of certain protein molecules. Prosthetic groups may be inorganic or organic and are usually required for the biological activity of the protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"prosthetic group metabolic process","termid":"GO:0051189"},{"relation_name":"part_of","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prosthetic group biosynthetic process","synonyms":[{"name":"coenzyme and prosthetic group biosynthesis","type":"broad"},{"name":"coenzyme and prosthetic group biosynthetic process","type":"broad"},{"name":"prosthetic group anabolism","type":"exact"},{"name":"prosthetic group biosynthesis","type":"exact"},{"name":"prosthetic group formation","type":"exact"},{"name":"prosthetic group synthesis","type":"exact"}],"termid":"GO:0051191"}


id: GO:0035782
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a mature natural killer cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis). A mature natural killer cell is a natural killer cell that is developmentally mature and expresses a variety of inhibitory and activating receptors that recognize MHC class and other stress related molecules.","definition_xrefs":["CL:0000824","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"natural killer cell chemotaxis","termid":"GO:0035747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mature natural killer cell chemotaxis","synonyms":[{"name":"activated natural killer cell chemotaxis","type":"exact"}],"termid":"GO:0035782"}


id: PBO:0058494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5689","termid":"PBO:0058494"}


id: FYPO:0000504
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which the occurrence of necrotic cell death is decreased. Necrotic cell death is morphologically characterized by a gain in cell volume (oncosis), swelling of organelles, plasma membrane rupture and subsequent loss of intracellular contents.","definition_xrefs":["GO:0070265","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased necrotic cell death (obsolete FYPO:0000504)","synonyms":[{"name":"necrotic cell death: decreased","type":"related"},{"name":"reduced necrotic cell death","type":"exact"}],"termid":"FYPO:0000504"}


id: GO:0098658
data:
  {"annotated_genes":["SJAG_02463"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[67105],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902434"}]},"cv_name":"biological_process","definition":"The directed movement of inorganic anions from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transmembrane transport","termid":"GO:0098661"},{"relation_name":"is_a","term_name":"inorganic ion import across plasma membrane","termid":"GO:0099587"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02463":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"inorganic anion import across plasma membrane","references_by_uniquename":{"GO_REF:0000117":null},"synonyms":[{"name":"inorganic anion import into cell","type":"exact"}],"termid":"GO:0098658","terms_by_termid":{"GO:1902434":null}}


id: GO:1901617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of organic hydroxy compound.","definition_xrefs":["GOC:TermGenie","GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete organic hydroxy compound biosynthetic process (obsolete GO:1901617)","synonyms":[{"name":"organic hydroxy compound anabolism","type":"exact"},{"name":"organic hydroxy compound biosynthesis","type":"exact"},{"name":"organic hydroxy compound formation","type":"exact"},{"name":"organic hydroxy compound synthesis","type":"exact"}],"termid":"GO:1901617"}


id: PBO:0081430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 284","termid":"PBO:0081430"}


id: PBO:0082464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Calcium and manganese transporter with higher affinity for Ca2+; involved in Ca2+ and Mn2+ homeostasis; localizes to the cis- and medial-Golgi apparatus; GFP-fusion localizes to the vacuole; required for the Mn2+-dependent function of glycosylation enzymes; TMEM165, a human ortholog linked to Congenital Disorders of Glycosylation, functionally complements the null allele; expression pattern and physical interactions suggest a possible role in ribosome biogenesis; expression regulated by Gcr1p","termid":"PBO:0082464"}


id: PR:Q9USP4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USP4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 1 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC11E10.03","synonyms":[{"name":"Spom972h-mug1","type":"exact"}],"termid":"PR:Q9USP4"}


id: PBO:0077978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon TGC) 1-1","termid":"PBO:0077978"}


id: MONDO:0007895
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spondylodysplastic dysplasia","termid":"MONDO:0019694"},{"relation_name":"is_a","term_name":"type 2 collagenopathy","termid":"MONDO:0022800"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platyspondylic dysplasia, Torrance type","secondary_identifiers":["MESH:C563627","DOID:0111508","OMIM:151210","icd11.foundation:263213426","GARD:4382","MEDGEN:331974","NANDO:2201347","Orphanet:85166","UMLS:C1835437"],"synonyms":[{"name":"PLSD-T","type":"exact"},{"name":"PLSDT","type":"related"},{"name":"Platyspondylic dysplasia, Torrance-Luton type","type":"exact"},{"name":"Platyspondylic lethal skeletal dysplasia Torrance type","type":"related"},{"name":"Platyspondylic lethal skeletal dysplasia, Luton type","type":"related"},{"name":"Platyspondylic lethal skeletal dysplasia, Torrance type","type":"exact"},{"name":"lethal short-limbed Platyspondylic dwarfism Torrance type","type":"related"},{"name":"lethal short-limbed Platyspondylic dwarfism, Torrance type","type":"related"},{"name":"platyspondylic dysplasia, Torrance type","type":"exact"},{"name":"platyspondylic skeletal dysplasia, Torrance type","type":"exact"},{"name":"thanatophoric dysplasia Torrance variant","type":"related"},{"name":"thanatophoric dysplasia, Luton variant","type":"related"},{"name":"thanatophoric dysplasia, Torrance variant","type":"related"}],"termid":"MONDO:0007895","xrefs":{"Monarch":{"xref_id":"0007895"}}}


id: FYPO:0003528
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found at the actomyosin contractile ring is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein during vegetative growth","termid":"FYPO:0000782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"protein mislocalized to actomyosin contractile ring","synonyms":[{"name":"ectopic protein localization to actomyosin contractile ring","type":"exact"},{"name":"protein mislocalised to actomyosin contractile ring","type":"exact"},{"name":"protein mislocalised to actomyosin contractile ring during vegetative growth","type":"exact"},{"name":"protein mislocalized to actomyosin contractile ring during mitotic cell cycle","type":"related"},{"name":"protein mislocalized to actomyosin contractile ring during vegetative growth","type":"exact"},{"name":"protein mislocalized to cytokinetic contractile ring","type":"exact"},{"name":"protein mislocalized to mitotic contractile ring","type":"exact"}],"termid":"FYPO:0003528"}


id: MONDO:0027462
data:
  {"annotated_genes":["SJAG_00212"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88609],"is_not":false,"summary":null,"term":"MONDO:0027462"}]},"cv_name":"mondo","definition":"An autosomal recessive cutis laxa type II classic type characterized by cardiovascular involvement that has material basis in homozygous mutation in the ATP6V1E1 gene on chromosome 22q11.","definition_xrefs":["DOID:0070140"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal recessive cutis laxa type 2, classic type","termid":"MONDO:0009054"},{"relation_name":"is_a","term_name":"autosomal recessive cutis laxa type 2","termid":"MONDO:0019573"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00212":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive cutis laxa type 2C","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1385755","OMIM:617402","UMLS:C4479387"],"synonyms":[{"name":"ARCL2C","type":"related"},{"name":"autosomal recessive cutis laxa type IIC","type":"related"},{"name":"cutis laxa, autosomal recessive, type 2C","type":"related"},{"name":"cutis laxa, autosomal recessive, type IIC","type":"related"}],"termid":"MONDO:0027462","terms_by_termid":{"MONDO:0027462":null},"xrefs":{"Monarch":{"xref_id":"0027462"}}}


id: PBO:0109616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 16, pseudogene","termid":"PBO:0109616"}


id: PBO:0048732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate dehydrogenase 1 pseudogene 3","termid":"PBO:0048732"}


id: MONDO:0001192
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A melanoma affecting the esophageal wall. Melanoma in the esophagus is more commonly metastatic than primary. Primary melanomas of the esophagus are polypoid and clinically aggressive. (WHO, 2000)","definition_xrefs":["NCIT:C5707"],"direct_ancestors":[{"relation_name":"is_a","term_name":"esophageal cancer","termid":"MONDO:0007576"},{"relation_name":"is_a","term_name":"digestive system melanoma","termid":"MONDO:0045070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"esophageal melanoma","secondary_identifiers":["DOID:1108","MEDGEN:272590","ONCOTREE:ESMM","UMLS:C1333460"],"synonyms":[{"name":"esophageal melanoma","type":"exact"},{"name":"esophagus melanoma","type":"exact"},{"name":"esophagus melanoma (disease)","type":"exact"},{"name":"melanoma (disease) of esophagus","type":"exact"},{"name":"melanoma (disease) of oesophagus","type":"exact"},{"name":"melanoma of esophagus","type":"exact"},{"name":"melanoma of oesophagus","type":"exact"},{"name":"melanoma of the esophagus","type":"exact"},{"name":"melanoma of the oesophagus","type":"exact"},{"name":"mucosal melanoma of the esophagus","type":"related"},{"name":"mucosal melanoma of the oesophagus","type":"related"},{"name":"oesophagus melanoma","type":"exact"},{"name":"oesophagus melanoma (disease)","type":"exact"}],"termid":"MONDO:0001192","xrefs":{"Monarch":{"xref_id":"0001192"}}}


id: GO:0001540
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an amyloid-beta peptide/protein.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"},{"relation_name":"is_a","term_name":"peptide binding","termid":"GO:0042277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"amyloid-beta binding","synonyms":[{"name":"beta-amyloid binding","type":"exact"}],"termid":"GO:0001540"}


id: PBO:0065387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSIP1 pseudogene 1","termid":"PBO:0065387"}


id: GO:0008762
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetylmuramate + NADP+ = UDP-N-acetyl-3-O-(1-carboxyvinyl)-D-glucosamine + NADPH + H+.","definition_xrefs":["EC:1.3.1.98"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"UDP-N-acetylmuramate dehydrogenase activity","secondary_identifiers":["MetaCyc:UDPNACETYLMURAMATEDEHYDROG-RXN","RHEA:12248"],"synonyms":[{"name":"MurB reductase","type":"related"},{"name":"UDP-GlcNAc-enoylpyruvate reductase activity","type":"related"},{"name":"UDP-N-acetylenolpyruvoylglucosamine reductase activity","type":"related"},{"name":"UDP-N-acetylglucosamine-enoylpyruvate reductase activity","type":"related"},{"name":"UDP-N-acetylmuramate:NADP+ oxidoreductase activity","type":"related"},{"name":"uridine diphospho-N-acetylglucosamine-enolpyruvate reductase activity","type":"related"},{"name":"uridine diphosphoacetylpyruvoylglucosamine reductase activity","type":"related"},{"name":"uridine-5'-diphospho-N-acetyl-2-amino-2-deoxy-3-O-lactylglucose:NADP-oxidoreductase activity","type":"related"}],"termid":"GO:0008762"}


id: MONDO:0000394
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete alcohol-related neurodevelopmental disorder (obsolete MONDO:0000394)","termid":"MONDO:0000394","xrefs":{"Monarch":{"xref_id":"0000394"}}}


id: GO:0031353
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the plastid inner membrane consisting of the gene products having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of plastid inner membrane (obsolete GO:0031353)","synonyms":[{"name":"integral to plastid inner membrane","type":"narrow"}],"termid":"GO:0031353"}


id: GO:0003788
data:
  {"annotated_genes":["SJAG_01993"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[116185],"is_not":false,"summary":null,"term":"GO:0003788"}]},"cv_name":"molecular_function","definition":"Binding to an actin monomer to prevent it from interacting with other partners or to inhibit its localization to the area of the cell or complex where it is active.","definition_xrefs":["PMID:11274401","PMID:1447300"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein sequestering activity","termid":"GO:0140311"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01993":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140311"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140313"}],"interesting_parent_ids":["GO:0140311","GO:0003674","GO:0140313"],"is_obsolete":false,"name":"actin monomer sequestering activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0003788","terms_by_termid":{"GO:0003788":null}}


id: MONDO:1011098
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alkaptonuria that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkaptonuria, non-human animal","termid":"MONDO:1010270"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkaptonuria, domestic cat","secondary_identifiers":["OMIA:001243-9685"],"termid":"MONDO:1011098","xrefs":{"Monarch":{"xref_id":"1011098"}}}


id: GO:1904420
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of telomeric loop formation.","definition_xrefs":["GOC:BHF","GO_REF:0000058","GOC:BHF_telomere","GOC:TermGenie","PMID:22579284","GOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of telomere maintenance","termid":"GO:0032206"},{"relation_name":"is_a","term_name":"regulation of telomeric loop formation","termid":"GO:1904418"},{"relation_name":"positively_regulates","term_name":"telomeric loop formation","termid":"GO:0031627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0032200"},{"rel_name":"positively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0032200","GO:0006259"],"is_obsolete":false,"name":"positive regulation of telomeric loop formation","synonyms":[{"name":"activation of t-loop biosynthesis","type":"narrow"},{"name":"activation of t-loop formation","type":"narrow"},{"name":"activation of telomeric loop formation","type":"narrow"},{"name":"positive regulation of t-loop biosynthesis","type":"exact"},{"name":"positive regulation of t-loop formation","type":"exact"},{"name":"up regulation of t-loop biosynthesis","type":"exact"},{"name":"up regulation of t-loop formation","type":"exact"},{"name":"up regulation of telomeric loop formation","type":"exact"},{"name":"up-regulation of t-loop biosynthesis","type":"exact"},{"name":"up-regulation of t-loop formation","type":"exact"},{"name":"up-regulation of telomeric loop formation","type":"exact"},{"name":"upregulation of t-loop biosynthesis","type":"exact"},{"name":"upregulation of t-loop formation","type":"exact"},{"name":"upregulation of telomeric loop formation","type":"exact"}],"termid":"GO:1904420"}


id: GO:0005727
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Circular DNA structures that are not part of a chromosome.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular anatomical structure","termid":"GO:0005622"},{"relation_name":"part_of","term_name":"extrachromosomal DNA","termid":"GO:0046821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"extrachromosomal circular DNA","termid":"GO:0005727"}


id: PBO:0081268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 33B pseudogene 1","termid":"PBO:0081268"}


id: GO:0048924
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a posterior lateral line neuromast mantle cell. (N.B. This may be development of neuromast mantle cell type or a set of cells of neuromast mantle cell type. This will involve the change of a cell or set of cells from one cell identity to another). Mantle cells are non-sensory cells that surround the sensory strip, separating the neuromast from the epidermis. Mantle cells secrete the cupula in which the ciliary bundles of all of the hair cells are embedded.","definition_xrefs":["ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromast mantle cell differentiation","termid":"GO:0048888"},{"relation_name":"part_of","term_name":"posterior lateral line neuromast development","termid":"GO:0048919"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior lateral line neuromast mantle cell differentiation","termid":"GO:0048924"}


