# terms

id: MONDO:0019152
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Oguchi disease is an autosomal recessive retinal disorder characterized by congenital stationary night blindness and the Mizuo-Nakamura phenomenon.","definition_xrefs":["Orphanet:75382"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital stationary night blindness","termid":"MONDO:0016293"},{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Oguchi disease","secondary_identifiers":["MESH:C537743","GARD:10118","UMLS:C1306122","MEDGEN:224927","icd11.foundation:1759055065"],"synonyms":[{"name":"Oguchi disease","type":"exact"},{"name":"Oguchi syndrome","type":"exact"},{"name":"congenital stationary night blindness, Oguchi type","type":"exact"},{"name":"stationary night blindness, Oguchi type","type":"related"}],"termid":"MONDO:0019152","xrefs":{"Monarch":{"xref_id":"0019152"}}}


id: GO:0015620
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of ferric-enterobactin from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"siderophore-iron transmembrane transporter activity","termid":"GO:0015343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"ferric-enterobactin transmembrane transporter activity","termid":"GO:0015620"}


id: PBO:0089779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma tubulin complex linker Mto1","termid":"PBO:0089779"}


id: PBO:0065883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB33A, member RAS oncogene family","termid":"PBO:0065883"}


id: GO:0035808
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that initiates the formation of double-strand breaks (DSBs) required for meiotic recombination. Consists of a protein that catalyses formation of the double-strand breaks (Spo11 in S. cerevisiae and Rec12 in S. pombe), and a number of accessory proteins.","definition_xrefs":["PMID:12897161","GOC:vw","PMID:21429938","PMID:20364342"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"condensed nuclear chromosome","termid":"GO:0000794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0005694","GO:0032991"],"is_obsolete":false,"name":"meiotic recombination initiation complex","termid":"GO:0035808"}


id: GO:0002108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maturation of a precursor Large SubUnit (LSU) ribosomal RNA (rRNA) molecule into a mature LSU-rRNA molecule from the pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, Large Subunit (LSU) the 5S rRNA in that order from 5' to 3' along the primary transcript.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturation of LSU-rRNA","termid":"GO:0000470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0042254","GO:0044085"],"is_obsolete":false,"name":"maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA,5S)","termid":"GO:0002108"}


id: GO:1990229
data:
  {"annotated_genes":["SJAG_02497","SJAG_02895","SJAG_04016","SJAG_03701","SJAG_00040","SJAG_01063","SJAG_00532","SJAG_02866","SJAG_03862","SJAG_03222","SJAG_02994","SJAG_01238","SJAG_04397","SJAG_00186","SJAG_02306","SJAG_00894"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[101853,69232],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904564"},{"annotations":[81095,73217,69543,90778],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097361"},{"annotations":[65117,94999,108712,115732,111526,104929,94772],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099128"},{"annotations":[119715,111708,94588,106590],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120510"}]},"cv_name":"cellular_component","definition":"A protein complex capable of assembling an iron-sulfur (Fe-S) cluster.","definition_xrefs":["GOC:bhm","PMID:17350958"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00040":null,"SJAG_00186":null,"SJAG_00532":null,"SJAG_00894":null,"SJAG_01063":null,"SJAG_01238":null,"SJAG_02306":null,"SJAG_02497":null,"SJAG_02866":null,"SJAG_02895":null,"SJAG_02994":null,"SJAG_03222":null,"SJAG_03701":null,"SJAG_03862":null,"SJAG_04016":null,"SJAG_04397":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"iron-sulfur cluster assembly complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"Fe-S cluster assembly complex","type":"narrow"},{"name":"SufBCD complex","type":"narrow"}],"termid":"GO:1990229","terms_by_termid":{"GO:0097361":null,"GO:0099128":null,"GO:0120510":null,"GO:1904564":null}}


id: MONDO:0017715
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of fatty acid oxidation and ketogenesis","termid":"MONDO:0017713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"3-hydroxyacyl-CoA dehydrogenase deficiency","secondary_identifiers":["MESH:C535310","UMLS:C1291230","Orphanet:309127","OMIM:231530","MEDGEN:266222","GARD:21319"],"termid":"MONDO:0017715","xrefs":{"Monarch":{"xref_id":"0017715"}}}


id: MONDO:0004037
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinal disorder","termid":"MONDO:0005283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"retinal edema","secondary_identifiers":["SCTID:6141006","UMLS:C0242420","MESH:D010211","MEDGEN:69183","DOID:6929","ICD10CM:H35.81","ICD9:362.83"],"termid":"MONDO:0004037","xrefs":{"Monarch":{"xref_id":"0004037"}}}


id: GO:0033517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phytic acid, myo-inositol hexakisphosphate, a regulator of intracellular signaling, a highly abundant animal anti-nutrient and a phosphate and mineral storage compound in plant seeds.","definition_xrefs":["PMID:16107538"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol phosphate metabolic process","termid":"GO:0043647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"myo-inositol hexakisphosphate metabolic process","synonyms":[{"name":"myo-inositol hexakisphosphate metabolism","type":"exact"},{"name":"phytate metabolic process","type":"exact"},{"name":"phytate metabolism","type":"exact"}],"termid":"GO:0033517"}


id: PBO:0110169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial and nuclear tRNA (guanine-N2-)-methyltransferase Trm1","termid":"PBO:0110169"}


id: MONDO:0003965
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare neuropsychiatric disorder whose primary feature is the delusion that relatives or close acquaintances are not the persons that they are known to be. Visual recognition appears intact but familiar persons are thought be imposters, that is, they appear similar or identical to known individuals but are not. Most cases are seen in the context of a psychotic state. However, if manifested post-traumatically, the cause is most likely due to neurologic impairment. This disorder should be contrasted with prosopagnosia, in which an individual may not recognize a familiar person at all.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"delusional disorder","termid":"MONDO:0004359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"Capgras syndrome","secondary_identifiers":["UMLS:C0006895","MEDGEN:2811","MESH:D002194","DOID:6680","NCIT:C34446"],"synonyms":[{"name":"Capgras delusion theory","type":"exact"}],"termid":"MONDO:0003965","xrefs":{"Monarch":{"xref_id":"0003965"}}}


id: SO:0000965
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Structural unit composed of a self-replicating, double-stranded RNA molecule.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"double","termid":"SO:0000985"},{"relation_name":"is_a","term_name":"RNA_chromosome","termid":"SO:0000961"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double_stranded_RNA_chromosome","synonyms":[{"name":"double stranded RNA chromosome","type":"exact"}],"termid":"SO:0000965"}


id: PBO:0087196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA m5C methyltransferase; methylates cytosine at position 2278 of 25S rRNA while Nop2p methylates cytosine at position 2870; contains seven beta-strand methyltransferase motif; localized to the nucleolus; interacts with Trm112p; homolog of NSUN5A, a human gene which is deleted in Williams-Beuren Syndrome","termid":"PBO:0087196"}


id: GO:1901309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of sterol regulatory element binding protein cleavage.","definition_xrefs":["PMID:15899885","PMID:16525117","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of sterol regulatory element binding protein cleavage (obsolete GO:1901309)","synonyms":[{"name":"down regulation of SREBP cleavage","type":"exact"},{"name":"down regulation of sterol regulatory element binding protein cleavage","type":"exact"},{"name":"down-regulation of SREBP cleavage","type":"exact"},{"name":"down-regulation of sterol regulatory element binding protein cleavage","type":"exact"},{"name":"downregulation of SREBP cleavage","type":"exact"},{"name":"downregulation of sterol regulatory element binding protein cleavage","type":"exact"},{"name":"inhibition of SREBP cleavage","type":"exact"},{"name":"inhibition of SREBP processing","type":"exact"},{"name":"inhibition of sterol regulatory element binding protein cleavage","type":"narrow"},{"name":"negative regulation of SREBP cleavage","type":"exact"}],"termid":"GO:1901309"}


id: MONDO:1011566
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neurofibromatosis that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurofibromatosis, non-human animal","termid":"MONDO:1011437"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofibromatosis, cattle","secondary_identifiers":["OMIA:000716-9913"],"termid":"MONDO:1011566","xrefs":{"Monarch":{"xref_id":"1011566"}}}


id: GO:1905937
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of germ cell proliferation.","definition_xrefs":["GOC:TermGenie","PMID:15342467","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of germ cell proliferation","termid":"GO:1905936"},{"relation_name":"negatively_regulates","term_name":"germ cell proliferation","termid":"GO:0036093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of germ cell proliferation","synonyms":[{"name":"down regulation of germ cell proliferation","type":"exact"},{"name":"down-regulation of germ cell proliferation","type":"exact"},{"name":"downregulation of germ cell proliferation","type":"exact"},{"name":"inhibition of germ cell proliferation","type":"narrow"}],"termid":"GO:1905937"}


id: PBO:0048417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GATA binding protein 5","termid":"PBO:0048417"}


id: PBO:0064732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 68","termid":"PBO:0064732"}


id: GO:0061260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the mesangial cells of the mesonephros as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in mesonephros development","termid":"GO:0061208"},{"relation_name":"is_a","term_name":"mesangial cell differentiation","termid":"GO:0072007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric mesangial cell differentiation","termid":"GO:0061260"}


id: PBO:0028708
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_double-strand_break_sites","termid":"PBO:0028708"}


id: MONDO:0024330
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the anatomical structures of the middle ear secondary to an infectious process. Bacterial etiology is most common, but both viral and fungal pathogens are also possible. Symptoms include erythema and edema of the tympanic membrane, pain, and possibly fever. In severe infections, inflammation and edema of the structures of the middle ear can lead to perforation of the tympanic membrane secondary to the buildup of pressure in the narrow space.","definition_xrefs":["NCIT:C84354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"otitis media","termid":"MONDO:0005441"},{"relation_name":"is_a","term_name":"ear infection","termid":"MONDO:0021666"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infectious otitis media","secondary_identifiers":["UMLS:C2827407","MEDGEN:443472"],"synonyms":[{"name":"AOM","type":"exact"},{"name":"acute otitis Media","type":"exact"},{"name":"infectious otitis Media","type":"exact"},{"name":"middle Ear infection","type":"exact"},{"name":"otitis media","type":"broad"}],"termid":"MONDO:0024330","xrefs":{"Monarch":{"xref_id":"0024330"}}}


id: PBO:0048541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GET1-SH3BGR readthrough","termid":"PBO:0048541"}


id: PBO:0044563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deleted in azoospermia 4","termid":"PBO:0044563"}


id: SO:0002195
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The pseudogene has no parent. It is the original gene, which is functional in some species but disrupted in some way (indels, mutation, recombination) in another species or strain.","direct_ancestors":[{"relation_name":"is_a","term_name":"pseudogenic_rRNA","termid":"SO:0000777"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unitary_pseudogenic_rRNA","synonyms":[{"name":"INSDC_feature:rRNA","type":"broad"},{"name":"INSDC_qualifier:unitary","type":"exact"},{"name":"unitary pseudogenic rRNA","type":"exact"}],"termid":"SO:0002195"}


id: GO:0019567
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of arabinose, arabino-pentose.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentose biosynthetic process","termid":"GO:0019322"},{"relation_name":"is_a","term_name":"arabinose metabolic process","termid":"GO:0019566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"arabinose biosynthetic process","synonyms":[{"name":"arabinose anabolism","type":"exact"},{"name":"arabinose biosynthesis","type":"exact"},{"name":"arabinose formation","type":"exact"},{"name":"arabinose synthesis","type":"exact"}],"termid":"GO:0019567"}


id: PBO:0089854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome methytransferase involved in ribosome assembly Hpm1","termid":"PBO:0089854"}


id: PBO:0075890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4","termid":"PBO:0075890"}


id: PBO:0040265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase","termid":"PBO:0040265"}


id: PBO:0030205
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_multinucleate_vegetative_cell","termid":"PBO:0030205"}


id: GO:0034728
data:
  {"annotated_genes":["SJAG_01653","SJAG_02906","SJAG_04670","SJAG_04257","SJAG_04038","SJAG_03542","SJAG_04272","SJAG_02198","SJAG_02314","SJAG_00336","SJAG_02416","SJAG_03128","SJAG_00303","SJAG_00170","SJAG_03982","SJAG_00942"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59252,76546,113125,115151],"is_not":false,"summary":null,"term":"GO:0034728"},{"annotations":[71611,92928,80611,92927,109567,63012,75008,98267,116403,74755],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006334"},{"annotations":[91878,118766,98898],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006337"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of one or more nucleosomes.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin remodeling","termid":"GO:0006338"},{"relation_name":"is_a","term_name":"protein-DNA complex organization","termid":"GO:0071824"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00170":null,"SJAG_00303":null,"SJAG_00336":null,"SJAG_00942":null,"SJAG_01653":null,"SJAG_02198":null,"SJAG_02314":null,"SJAG_02416":null,"SJAG_02906":null,"SJAG_03128":null,"SJAG_03542":null,"SJAG_03982":null,"SJAG_04038":null,"SJAG_04257":null,"SJAG_04272":null,"SJAG_04670":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006325","GO:0008150"],"is_obsolete":false,"name":"nucleosome organization","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"nucleosome organisation","type":"exact"}],"termid":"GO:0034728","terms_by_termid":{"GO:0006334":null,"GO:0006337":null,"GO:0034728":null}}


id: PBO:0108935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 14","termid":"PBO:0108935"}


id: MONDO:1011029
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An early onset syndrome of impaired neuromuscular transmission associated with a defect in acetylcholine synthesis in dogs due to a variation in the CHAT gene.","definition_xrefs":["PMID:32668077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"congenital neuromuscular disease, non-human animal","termid":"MONDO:1011851"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital myasthenic syndrome, CHAT-related, dog","secondary_identifiers":["OMIA:002072-9615"],"termid":"MONDO:1011029","xrefs":{"Monarch":{"xref_id":"1011029"}}}


id: MOD:01432
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-leucine residue to a (2S,4S)-4,5-dihydroxyleucine.","definition_xrefs":["RESID:AA0446","PubMed:3718926","ChEBI:141819"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dihydroxylated leucine","termid":"MOD:01412"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(2S,4S)-4,5-dihydroxyleucine","synonyms":[{"name":"(2S,4S)-2-amino-4,5-dihydroxy-4-methylpentanoic acid","type":"exact"},{"name":"(2S,4S)-4,5-dihydroxyleucine","type":"exact"},{"name":"(4S)-4,5-dihydroxyleucine","type":"exact"},{"name":"MOD_RES (4S)-4,5-dihydroxyleucine","type":"exact"},{"name":"gamma,delta-dihydroxyleucine","type":"exact"}],"termid":"MOD:01432"}


id: MONDO:1012243
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinal dystrophy, non-human animal","termid":"MONDO:1011980"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinal dystrophy, domestic cat","secondary_identifiers":["OMIA:000869-9685"],"termid":"MONDO:1012243","xrefs":{"Monarch":{"xref_id":"1012243"}}}


id: PBO:0076793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TEDC2 antisense RNA 1","termid":"PBO:0076793"}


id: PBO:0083769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential non-ATPase regulatory subunit of the 26S proteasome lid; similar to the p58 subunit of the human 26S proteasome; temperature-sensitive alleles cause metaphase arrest, suggesting a role for the proteasome in cell cycle control","termid":"PBO:0083769"}


id: GO:2000290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of myotome development.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"myotome development","termid":"GO:0061055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of myotome development","termid":"GO:2000290"}


id: GO:0016200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a neuronal cell in a multicellular organism recognizes chemoattractant signals from, and grows towards, potential targets.","definition_xrefs":["GOC:mah","ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive chemotaxis","termid":"GO:0050918"},{"relation_name":"part_of","term_name":"synaptic target recognition","termid":"GO:0008039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"synaptic target attraction","termid":"GO:0016200"}


id: GO:1990022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of an RNA polymerase III complex from the cytoplasm to the nucleus.","definition_xrefs":["GOC:mcc","PMID:23267056"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA polymerase III complex import into nucleus (obsolete GO:1990022)","synonyms":[{"name":"DNA-directed RNA polymerase III complex import into nucleus","type":"exact"},{"name":"DNA-directed RNA polymerase III complex localization to nucleus","type":"exact"},{"name":"RNA polymerase III complex import into nucleus","type":"exact"},{"name":"RNA polymerase III complex localisation to nucleus","type":"exact"},{"name":"RNA polymerase III complex localization to nucleus","type":"related"}],"termid":"GO:1990022"}


id: PBO:0063296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin gamma subfamily C, 3","termid":"PBO:0063296"}


id: PBO:0085290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pex3p interacting protein, required for pexophagy; interacts with Atg8p and Atg11p; mRNA is weakly cell cycle regulated, peaking in G2 phase; YJL185C is a non-essential gene","termid":"PBO:0085290"}


id: PBO:0079414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 8 class VIII pseudogene 8","termid":"PBO:0079414"}


id: PBO:0012844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ski complex interacting GTPase Ski7","termid":"PBO:0012844"}


id: MONDO:0020799
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplastic proliferation of basal cells in the epidermis (part of the skin) or other anatomic sites (most frequently the salivary glands). The basal cell neoplastic proliferation in the epidermis results in basal cell carcinomas. The basal cell neoplastic proliferation in the salivary glands can be benign, resulting in basal cell adenomas or malignant, resulting in basal cell adenocarcinomas.","definition_xrefs":["NCIT:C3784"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial neoplasm","termid":"MONDO:0005626"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basal cell neoplasm","secondary_identifiers":["SCTID:127570002","UMLS:C0206710","ICDO:8090/1","MESH:D018295","EFO:1001763","MEDGEN:104921"],"synonyms":[{"name":"basal cell tumor","type":"exact"},{"name":"basal cell tumour","type":"exact"},{"name":"neoplasm, basal cell","type":"related"}],"termid":"MONDO:0020799","xrefs":{"Monarch":{"xref_id":"0020799"}}}


id: GO:0004332
data:
  {"annotated_genes":["SJAG_01310","SJAG_03373"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72950,74817],"is_not":false,"summary":null,"term":"GO:0004332"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-D-fructose 1,6-bisphosphate = D-glyceraldehyde 3-phosphate + dihydroxyacetone phosphate.","definition_xrefs":["EC:4.1.2.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01310":null,"SJAG_03373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"fructose-bisphosphate aldolase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-71495","Reactome:R-HSA-71496","MetaCyc:F16ALDOLASE-RXN","RHEA:14729"],"synonyms":[{"name":"1,6-diphosphofructose aldolase activity","type":"related"},{"name":"D-fructose-1,6-bisphosphate D-glyceraldehyde-3-phosphate-lyase (glycerone-phosphate-forming)","type":"related"},{"name":"D-fructose-1,6-bisphosphate D-glyceraldehyde-3-phosphate-lyase activity","type":"related"},{"name":"SMALDO","type":"related"},{"name":"aldolase activity","type":"broad"},{"name":"diphosphofructose aldolase activity","type":"related"},{"name":"fructoaldolase activity","type":"related"},{"name":"fructose 1,6-diphosphate aldolase activity","type":"related"},{"name":"fructose 1-monophosphate aldolase activity","type":"related"},{"name":"fructose 1-phosphate aldolase activity","type":"related"},{"name":"fructose diphosphate aldolase activity","type":"related"},{"name":"fructose-1,6-bisphosphate triosephosphate-lyase activity","type":"related"},{"name":"ketose 1-phosphate aldolase activity","type":"related"},{"name":"phosphofructoaldolase activity","type":"related"},{"name":"zymohexase activity","type":"related"}],"termid":"GO:0004332","terms_by_termid":{"GO:0004332":null}}


id: PBO:0016063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase-like PAN complex subunit Pan3 (predicted)","termid":"PBO:0016063"}


id: PBO:0045380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPP3 pseudogene 1","termid":"PBO:0045380"}


id: GO:0072230
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric proximal straight tubule over time, from its formation to the mature structure. The metanephric proximal straight tubule is the part of the metanephric descending limb that extends from the metanephric proximal convoluted tubule to the metanephric descending thin tubule.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proximal straight tubule development","termid":"GO:0072020"},{"relation_name":"is_a","term_name":"metanephric nephron tubule development","termid":"GO:0072234"},{"relation_name":"part_of","term_name":"metanephric proximal tubule development","termid":"GO:0072237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric proximal straight tubule development","synonyms":[{"name":"metanephric S3 development","type":"exact"}],"termid":"GO:0072230"}


id: PBO:0038305
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA_level","termid":"PBO:0038305"}


id: GO:0036523
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a symbiont activates, maintains or increases the frequency, rate or extent of cytokine production by the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:bf","GOC:PARL","PMID:25063865"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by symbiont of host cytokine production (obsolete GO:0036523)","synonyms":[{"name":"'induction by symbiont of host cytokine secretion'","type":"narrow"},{"name":"induction by symbiont of host cytokine secretion","type":"related"},{"name":"positive regulation by symbiont of host cytokine secretion","type":"narrow"}],"termid":"GO:0036523"}


id: PBO:0041079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRICK1 subunit of SCAR/WAVE actin nucleating complex","termid":"PBO:0041079"}


id: PBO:0017012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin domain-like protein Blt1","termid":"PBO:0017012"}


id: PBO:0047930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(11)(q13)","termid":"PBO:0047930"}


id: PBO:0058602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6734","termid":"PBO:0058602"}


id: GO:0000381
data:
  {"annotated_genes":["SJAG_04782","SJAG_01169","SJAG_03214","SJAG_04863","SJAG_04949"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[66172,94705,107317,113386,114926],"is_not":false,"summary":null,"term":"GO:0000381"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of alternative splicing of nuclear mRNAs.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA splicing, via spliceosome","termid":"GO:0048024"},{"relation_name":"regulates","term_name":"alternative mRNA splicing, via spliceosome","termid":"GO:0000380"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01169":null,"SJAG_03214":null,"SJAG_04782":null,"SJAG_04863":null,"SJAG_04949":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0016071","GO:0010467"],"is_obsolete":false,"name":"regulation of alternative mRNA splicing, via spliceosome","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of alternative nuclear mRNA splicing, via spliceosome","type":"exact"},{"name":"splice site selection","type":"broad"}],"termid":"GO:0000381","terms_by_termid":{"GO:0000381":null}}


id: MONDO:0016343
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete unclassified cardiomyopathy (obsolete MONDO:0016343)","secondary_identifiers":["Orphanet:217678"],"termid":"MONDO:0016343","xrefs":{"Monarch":{"xref_id":"0016343"}}}


id: GO:0032849
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of a process that reduces the internal pH of a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular pH reduction","termid":"GO:0032847"},{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"is_a","term_name":"intracellular pH reduction","termid":"GO:0051452"},{"relation_name":"positively_regulates","term_name":"intracellular pH reduction","termid":"GO:0051452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cellular pH reduction","synonyms":[{"name":"activation of cellular pH reduction","type":"narrow"},{"name":"positive regulation of cell pH reduction","type":"exact"},{"name":"positive regulation of cellular acidification","type":"exact"},{"name":"positive regulation of intracellular acidification","type":"related"},{"name":"positive regulation of intracellular pH reduction","type":"exact"},{"name":"positive regulation of reduction of cellular pH","type":"exact"},{"name":"positive regulation of reduction of pH in cell","type":"exact"},{"name":"stimulation of cellular pH reduction","type":"narrow"},{"name":"up regulation of cellular pH reduction","type":"exact"},{"name":"up-regulation of cellular pH reduction","type":"exact"},{"name":"upregulation of cellular pH reduction","type":"exact"}],"termid":"GO:0032849"}


id: GO:0051886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of timing of anagen, the growth phase of the hair cycle.","definition_xrefs":["GOC:pr","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of hair follicle maturation","termid":"GO:0048817"},{"relation_name":"is_a","term_name":"regulation of timing of anagen","termid":"GO:0051884"},{"relation_name":"negatively_regulates","term_name":"anagen","termid":"GO:0042640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of timing of anagen","synonyms":[{"name":"down regulation of anagen","type":"related"},{"name":"down-regulation of anagen","type":"related"},{"name":"downregulation of anagen","type":"related"},{"name":"inhibition of anagen","type":"narrow"},{"name":"negative regulation of anagen","type":"related"}],"termid":"GO:0051886"}


id: MONDO:0030810
data:
  {"annotated_genes":["SJAG_03011","SJAG_00938"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88782,88783],"is_not":false,"summary":null,"term":"MONDO:0030810"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"progressive familial intrahepatic cholestasis","termid":"MONDO:0015762"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_03011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0005066","MONDO:0004335"],"is_obsolete":false,"name":"cholestasis, progressive familial intrahepatic, 10","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:619868","MEDGEN:1807702","UMLS:C5676981"],"synonyms":[{"name":"PFIC10","type":"exact"},{"name":"cholestasis, progressive familial intrahepatic, 10","type":"exact"}],"termid":"MONDO:0030810","terms_by_termid":{"MONDO:0030810":null},"xrefs":{"Monarch":{"xref_id":"0030810"}}}


id: RO:0002383
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x proper_tributary_of y iff x tributary_of y and x does not originate from y","direct_ancestors":[{"relation_name":"is_a","term_name":"tributary_of","termid":"RO:0002376"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proper_tributary_of","termid":"RO:0002383"}


id: GO:0072507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of divalent cations within an organism or cell.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete divalent inorganic cation homeostasis (obsolete GO:0072507)","termid":"GO:0072507"}


id: MONDO:0013741
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A temporal lobe epilepsy that has material basis in heterozygous mutation in the CPA6 gene on chromosome 8q13.","definition_xrefs":["PMID:21922598","DOID:0060752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"temporal lobe epilepsy","termid":"MONDO:0005115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"familial temporal lobe epilepsy 5","secondary_identifiers":["GARD:18280","OMIM:614417","UMLS:C3280730","MEDGEN:482360"],"synonyms":[{"name":"ETL5","type":"exact"},{"name":"epilepsy, familial temporal lobe, 5","type":"related"},{"name":"epilepsy, familial temporal lobe, type 5","type":"exact"},{"name":"familial temporal lobe epilepsy type 5","type":"exact"}],"termid":"MONDO:0013741","xrefs":{"Monarch":{"xref_id":"0013741"}}}


id: PBO:0043400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CMKLR2 antisense RNA","termid":"PBO:0043400"}


id: PBO:0034213
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_mimicry_relationship_with","termid":"PBO:0034213"}


id: PBO:0080016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 2","termid":"PBO:0080016"}


id: _global:trans_spliced_from
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trans_spliced_from","termid":"_global:trans_spliced_from"}


id: GO:0071164
data:
  {"annotated_genes":["SJAG_03901"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76751],"is_not":false,"summary":null,"term":"GO:0071164"}]},"cv_name":"molecular_function","definition":"Catalysis of two successive methyl transfer reactions from AdoMet to the N-2 atom of guanosine, thereby converting 7-methylguanosine in an RNA cap to 2,2,7 trimethylguanosine.","definition_xrefs":["PMID:18775984","PMID:11983179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA methyltransferase activity","termid":"GO:0008173"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03901":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003674","GO:0003824","GO:0140098"],"is_obsolete":false,"name":"RNA cap trimethylguanosine synthase activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"RNA trimethylguanosine synthase activity","type":"exact"},{"name":"cap hypermethylase activity","type":"exact"},{"name":"small nuclear RNA methyltransferase activity","type":"related"},{"name":"snRNA methyltransferase activity","type":"related"}],"termid":"GO:0071164","terms_by_termid":{"GO:0071164":null}}


id: PBO:0043358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claspin","termid":"PBO:0043358"}


id: PBO:0002099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate-CoA ligase alpha subunit (predicted)","termid":"PBO:0002099"}


id: MONDO:0016451
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Idiopathic hypersomnia with long sleep time is a sleep disorder characterized by good quality night rest of 10 hours or more, excessive daytime drowsiness that is more or less continual with long episodes of non-restorative sleep, and difficult waking with sleep drunkenness or sleep inertia.","definition_xrefs":["Orphanet:228315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"idiopathic hypersomnia","termid":"MONDO:0018044"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"idiopathic hypersomnia with long sleep time","secondary_identifiers":["UMLS:C2711059","MEDGEN:750832","SCTID:442416002","ICD10CM:G47.11","ICD9:327.11"],"termid":"MONDO:0016451","xrefs":{"Monarch":{"xref_id":"0016451"}}}


id: GO:0006112
data:
  {"annotated_genes":["SJAG_00570","SJAG_04963","SJAG_06309","SJAG_00115","SJAG_02076","SJAG_03851","SJAG_03964","SJAG_02178","SJAG_00963","SJAG_01783","SJAG_03442","SJAG_01376","SJAG_00132","SJAG_01319","SJAG_01561","SJAG_01089","SJAG_01080"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90917,97603,108509,113641,116374,117713],"is_not":false,"summary":null,"term":"GO:0006112"},{"annotations":[105126],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005980"},{"annotations":[81921,74294],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005977"},{"annotations":[81608,73824,74845,80596,73564,75137],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061723"},{"annotations":[78840,80766],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045719"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways by which a cell derives energy from stored compounds such as fats or glycogen.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"energy derivation by oxidation of organic compounds","termid":"GO:0015980"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00115":null,"SJAG_00132":null,"SJAG_00570":null,"SJAG_00963":null,"SJAG_01080":null,"SJAG_01089":null,"SJAG_01319":null,"SJAG_01376":null,"SJAG_01561":null,"SJAG_01783":null,"SJAG_02076":null,"SJAG_02178":null,"SJAG_03442":null,"SJAG_03851":null,"SJAG_03964":null,"SJAG_04963":null,"SJAG_06309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"energy reserve metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"energy reserve metabolism","type":"exact"}],"termid":"GO:0006112","terms_by_termid":{"GO:0005977":null,"GO:0005980":null,"GO:0006112":null,"GO:0045719":null,"GO:0061723":null}}


id: GO:0000080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle 'gap' phase which is the interval between the completion of DNA segregation by mitosis and the beginning of DNA synthesis.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G1 phase","termid":"GO:0051318"},{"relation_name":"part_of","term_name":"mitotic interphase","termid":"GO:0051329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0051329"}],"interesting_parent_ids":["GO:0051329","GO:0008150"],"is_obsolete":false,"name":"mitotic G1 phase","secondary_identifiers":["Reactome:R-HSA-69236"],"synonyms":[{"name":"G1 phase of mitotic cell cycle","type":"exact"}],"termid":"GO:0000080"}


id: GO:0009441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving glycolate, the anion of hydroxyethanoic acid (glycolic acid).","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"primary alcohol metabolic process","termid":"GO:0034308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"glycolate metabolic process","secondary_identifiers":["MetaCyc:GLYCOLATEMET-PWY"],"synonyms":[{"name":"glycolate metabolism","type":"exact"}],"termid":"GO:0009441"}


id: PBO:0064283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain containing N1","termid":"PBO:0064283"}


id: GO:0102689
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + N(6)-dimethylallyladenine = H+ + 7-(alpha-D-glucosyl)-N(6)-isopentenyladenine + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete UDP-glucose:isopentenyladenine 7-N-glucosyltransferase activity (obsolete GO:0102689)","termid":"GO:0102689"}


id: GO:0072183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of nephron tubule epithelial cell differentiation.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nephron tubule epithelial cell differentiation","termid":"GO:0072182"},{"relation_name":"is_a","term_name":"negative regulation of kidney development","termid":"GO:0090185"},{"relation_name":"is_a","term_name":"negative regulation of epithelial cell differentiation involved in kidney development","termid":"GO:2000697"},{"relation_name":"negatively_regulates","term_name":"nephron tubule epithelial cell differentiation","termid":"GO:0072160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of nephron tubule epithelial cell differentiation","termid":"GO:0072183"}


id: GO:0052156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts the T-cell mediated immune response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host immune response","termid":"GO:0052553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host T-cell mediated immune response","secondary_identifiers":["GO:0052295"],"synonyms":[{"name":"modulation by organism of T-cell mediated immune response of other organism involved in symbiotic interaction","type":"broad"},{"name":"modulation by symbiont of host T-cell mediated immune response","type":"exact"},{"name":"perturbation of host T-cell mediated immune response","type":"exact"},{"name":"symbiont-mediated modulation of host cell-mediated immune response","type":"exact"},{"name":"symbiont-mediated perturbation of host cell-mediated immune response","type":"exact"}],"termid":"GO:0052156"}


id: MONDO:0021207
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A Crohn disease involving a pathogenic inflammatory response in the jejunum.","definition_xrefs":["MONDO:patterns/specific_inflammatory_disease_by_site"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small bowel Crohn disease","termid":"MONDO:0005539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"Crohn jejunitis","secondary_identifiers":["UMLS:C0267379","MEDGEN:540631","SCTID:91390005"],"termid":"MONDO:0021207","xrefs":{"Monarch":{"xref_id":"0021207"}}}


id: MONDO:0002106
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inner ear disorder","termid":"MONDO:0002467"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"labyrinthine unilateral reactive loss","secondary_identifiers":["MEDGEN:510005","UMLS:C0155519","ICD9:386.55","DOID:1776"],"synonyms":[{"name":"loss of labyrinthine reactivity, unilateral","type":"exact"},{"name":"unilateral loss of labyrinthine reactivity","type":"exact"}],"termid":"MONDO:0002106","xrefs":{"Monarch":{"xref_id":"0002106"}}}


id: PBO:0064035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 69","termid":"PBO:0064035"}


id: PBO:0064037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 71","termid":"PBO:0064037"}


id: GO:0031747
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 2 cysteinyl leukotriene receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteinyl leukotriene receptor binding","termid":"GO:0031745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"type 2 cysteinyl leukotriene receptor binding","synonyms":[{"name":"type 2 cysteinyl leukotriene receptor ligand","type":"narrow"}],"termid":"GO:0031747"}


id: MONDO:0044206
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"otospondylomegaepiphyseal dysplasia","termid":"MONDO:0008975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"otospondylomegaepiphyseal dysplasia, autosomal recessive","secondary_identifiers":["OMIM:215150","UMLS:C5551484","MEDGEN:1790497"],"synonyms":[{"name":"Nance-Insley syndrome","type":"related"},{"name":"Nance-Sweeney chondrodysplasia","type":"related"},{"name":"OSMED","type":"related"},{"name":"OSMEDB","type":"related"},{"name":"Weissenbacher-Zweymuller syndrome","type":"related"},{"name":"Weissenbacher-Zweymuller syndrome, formerly","type":"related"},{"name":"chondrodystrophy with sensorineural deafness","type":"related"},{"name":"otospondylomegaepiphyseal dysplasia, autosomal recessive","type":"exact"}],"termid":"MONDO:0044206","xrefs":{"Monarch":{"xref_id":"0044206"}}}


id: FYPO:0003385
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of cadmium ions measured in a cell is higher than normal during a cellular response to cadmium ion.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular cadmium level during cellular response to cadmium ion","synonyms":[{"name":"increased cadmium accumulation during cellular response to cadmium","type":"related"},{"name":"increased cellular cadmium accumulation during cellular response to cadmium","type":"related"},{"name":"increased cellular cadmium ion level during cellular response to cadmium","type":"exact"},{"name":"increased cellular cadmium level during cellular response to cadmium","type":"exact"},{"name":"increased cellular cadmium level during cellular response to cadmium during mitotic cell cycle","type":"related"},{"name":"increased cellular cadmium level during cellular response to cadmium during vegetative growth","type":"exact"}],"termid":"FYPO:0003385"}


id: GO:0050605
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: superoxide + reduced rubredoxin + 2 H+ = H2O2 + rubredoxin.","definition_xrefs":["EC:1.15.1.2","MetaCyc:1.15.1.2-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antioxidant activity","termid":"GO:0016209"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on superoxide radicals as acceptor","termid":"GO:0016721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"superoxide reductase activity","secondary_identifiers":["RHEA:21324"],"synonyms":[{"name":"desulfoferrodoxin activity","type":"related"},{"name":"neelaredoxin activity","type":"related"},{"name":"rubredoxin:superoxide oxidoreductase activity","type":"related"}],"termid":"GO:0050605"}


id: GO:0043814
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-phospho-(S)-lactate + GTP = lactyl-2-diphospho-5'-guanosine + diphosphate.","definition_xrefs":["PMID:18260642","RHEA:63424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanylyltransferase activity","termid":"GO:0070568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016779","GO:0003674"],"is_obsolete":false,"name":"phospholactate guanylyltransferase activity","secondary_identifiers":["EC:2.7.7.68"],"termid":"GO:0043814"}


id: PBO:0054769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2181","termid":"PBO:0054769"}


id: MOD:00380
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-aspartic acid residue to L-aspartyl molybdenum bis(molybdopterin guanine dinucleotide).","definition_xrefs":["RESID:AA0375","PubMed:12910261","Unimod:424#D","PubMed:14725769"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molybdopterin guanine dinucleotide","termid":"MOD:01167"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-aspartic acid residue","termid":"MOD:02066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-aspartyl molybdenum bis(molybdopterin guanine dinucleotide)","synonyms":[{"name":"2-amino-5,6-dimercapto-7-methyl-3,7,8a,9-tetrahydro-8-oxa-1,3,9,10-tetraazaanthracen-4-one guanosine dinucleotide","type":"exact"},{"name":"L-aspartyl molybdenum bis(molybdopterin guanine dinucleotide)","type":"exact"},{"name":"MolybdopterinGD","type":"related"},{"name":"bis[8-amino-1a,2,4a,5,6,7,10-heptahydro-2-(trihydrogen diphosphate 5'-ester with guanosine)methyl-6-oxo-3,4-disulfanyl-pteridino[6,7-5,6]pyranoato-S3,S4]-aspartyl-molybdenum","type":"exact"},{"name":"molybdenum bis(molybdopterin guanine dinucleotide)","type":"related"},{"name":"nitrate reductase A aspartyl Mo-bisMGD cofactor","type":"exact"},{"name":"phosphoric acid 4-(2-amino-4-oxo-3,4,5,6,-tetrahydro-pteridin-6-yl)-2-hydroxy-3,4-dimercapto-but-3-en-yl ester guanylate ester","type":"exact"}],"termid":"MOD:00380"}


id: PBO:0043781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C3 and PZP like alpha-2-macroglobulin domain containing 8","termid":"PBO:0043781"}


id: GO:0004482
data:
  {"annotated_genes":["SJAG_04034"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74084],"is_not":false,"summary":null,"term":"GO:0004482"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + G(5')pppR-RNA = S-adenosyl-L-homocysteine + m7G(5')pppR-RNA. m7G(5')pppR-RNA is mRNA containing an N7-methylguanine cap; R may be guanosine or adenosine.","definition_xrefs":["EC:2.1.1.56"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"mRNA methyltransferase activity","termid":"GO:0008174"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04034":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140098","GO:0003674","GO:0016740","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"mRNA 5'-cap (guanine-N7-)-methyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:MRNA-GUANINE-N7--METHYLTRANSFERASE-RXN","Reactome:R-HSA-9694492","Reactome:R-HSA-9694737","Reactome:R-HSA-9684016","Reactome:R-HSA-9694476","Reactome:R-HSA-77090","Reactome:R-HSA-9684017","Reactome:R-HSA-9830848","Reactome:R-HSA-9684018"],"synonyms":[{"name":"S-adenosyl-L-methionine:mRNA (guanine-7-N-)-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:mRNA (guanine-N7-)-methyltransferase activity","type":"related"},{"name":"guanine-7-methyltransferase activity","type":"related"},{"name":"messenger RNA guanine 7-methyltransferase activity","type":"related"},{"name":"messenger ribonucleate guanine 7-methyltransferase activity","type":"related"}],"termid":"GO:0004482","terms_by_termid":{"GO:0004482":null}}


id: GO:0098020
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The part of the viral tail that comprises the least common subunit type.","definition_xrefs":["GOC:bm"],"gene_count":0,"genotype_count":0,"name":"obsolete virus tail, minor subunit (obsolete GO:0098020)","synonyms":[{"name":"bacteriophage minor protein subunit","type":"narrow"},{"name":"minor tail protein","type":"related"}],"termid":"GO:0098020"}


id: PBO:0047749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folliculin interacting protein 2","termid":"PBO:0047749"}


id: PBO:0117389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patatin like domain 7, lysophospholipase","termid":"PBO:0117389"}


id: PBO:0040466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP23 metallopeptidase and ATP synthase assembly factor homolog","termid":"PBO:0040466"}


id: MONDO:0017921
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hearing loss-familial salivary gland insensitivity to aldosterone syndrome is characterized by bilateral moderate-to-severe sensorineural hearing loss and salivary gland insensitivity to aldosterone resulting in hyponatremia. It has been described in two brothers. Transmission appeared to be autosomal recessive.","definition_xrefs":["Orphanet:3225"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hearing loss-familial salivary gland insensitivity to aldosterone syndrome","secondary_identifiers":["GARD:18788","MESH:C536927","UMLS:C2931369","MEDGEN:419395","SCTID:716239006"],"synonyms":[{"name":"Tungland-Bellman syndrome","type":"exact"},{"name":"Tunglang savage Bellman syndrome","type":"related"},{"name":"hearing loss and familial salivary gland insensitivity to aldosterone","type":"related"},{"name":"hearing loss insensitivity to aldosterone","type":"related"}],"termid":"MONDO:0017921","xrefs":{"Monarch":{"xref_id":"0017921"}}}


id: PBO:0075628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shadow of prion protein pseudogene 1","termid":"PBO:0075628"}


id: PBO:0059617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 29","termid":"PBO:0059617"}


id: GO:0004579
data:
  {"annotated_genes":["SJAG_04127","SJAG_03333"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78153,80996],"is_not":false,"summary":null,"term":"GO:0004579"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: dolichyl diphosphooligosaccharide + protein L-asparagine = dolichyl diphosphate + a glycoprotein with the oligosaccharide chain attached by glycosylamine linkage to protein L-asparagine.","definition_xrefs":["RHEA:22980"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharyl transferase activity","termid":"GO:0004576"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03333":null,"SJAG_04127":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"dolichyl-diphosphooligosaccharide-protein glycotransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-9694793","MetaCyc:RXN-16761","Reactome:R-HSA-446209","EC:2.4.99.18"],"synonyms":[{"name":"asparagine N-glycosyltransferase activity","type":"exact"},{"name":"dolichyl-diphosphooligosaccharide-protein glycosyltransferase activity","type":"exact"},{"name":"dolichyl-diphosphooligosaccharide:protein-L-asparagine oligopolysaccharidotransferase activity","type":"exact"},{"name":"dolichyldiphosphooligosaccharide-protein glycosyltransferase activity","type":"exact"},{"name":"dolichyldiphosphooligosaccharide-protein oligosaccharyltransferase activity","type":"exact"},{"name":"dolichyldiphosphoryloligosaccharide-protein oligosaccharyltransferase activity","type":"exact"},{"name":"dolichylpyrophosphodiacetylchitobiose-protein glycosyltransferase activity","type":"exact"},{"name":"oligomannosyltransferase activity","type":"related"}],"termid":"GO:0004579","terms_by_termid":{"GO:0004579":null}}


id: PBO:0073923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 16 member 12","termid":"PBO:0073923"}


id: PBO:0090606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3-H4 chaperone, CAF assembly factor (CAF-1) complex subunit A Pcf1","termid":"PBO:0090606"}


id: MONDO:0014161
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial vesicoureteral reflux","termid":"MONDO:0017329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicoureteral reflux 7","secondary_identifiers":["GARD:18424","OMIM:615390","MEDGEN:815667","UMLS:C3809337"],"synonyms":[{"name":"VUR7","type":"exact"},{"name":"vesicoureteral reflux 7","type":"exact"}],"termid":"MONDO:0014161","xrefs":{"Monarch":{"xref_id":"0014161"}}}


id: PBO:0091560
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial Morphology and Distribution","termid":"PBO:0091560"}


id: PBO:0050686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 8 pseudogene 13","termid":"PBO:0050686"}


id: MONDO:0700282
data:
  {"annotated_genes":["SJAG_03761","SJAG_01444","SJAG_00637","SJAG_04934"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86916],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014666"},{"annotations":[87309],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013722"},{"annotations":[88305],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030263"},{"annotations":[87967,87966],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011897"}]},"cv_name":"mondo","definition":"Hypomyelinating leukodystrophy disorder in which is caused of the disease is a variation in any of the genes encoding POLR3 (RNA polymerase III) subunits, including POLR3A, POLR3B and POLR1C. This disorder is characterized by the association of dental abnormalities (delayed dentition, abnormal order of dentition, hypodontia), hypogonadotropic hypogonadism, and hypomyelinating leukodystrophy manifesting with neurodevelopmental delay or regression and/or progressive cerebellar symptoms.","definition_xrefs":["PMID:22855961"],"direct_ancestors":[{"relation_name":"is_a","term_name":"POLR-related leukodystrophy","termid":"MONDO:0100605"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00637":null,"SJAG_01444":null,"SJAG_03761":null,"SJAG_04934":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"POLR3-related leukodystrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1864428","UMLS:C5819567"],"termid":"MONDO:0700282","terms_by_termid":{"MONDO:0011897":null,"MONDO:0013722":null,"MONDO:0014666":null,"MONDO:0030263":null},"xrefs":{"Monarch":{"xref_id":"0700282"}}}


id: GO:0140709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A type of non-canonical Wnt signaling in which Wnt binding to its receptor on the surface a the target cell results in internalization and cleavage of the frizzled receptor to yield a C-terminal fragment that is imported into the nucleus. The frizzled C-terminal fragment is incorporated into large ribonucleoprotein particles and stimulates their egress via nuclear budding.","definition_xrefs":["PMID:22510459","PMID:22579286"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-canonical Wnt signaling pathway","termid":"GO:0035567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"Frizzled Nuclear Import pathway","synonyms":[{"name":"FNI","type":"broad"},{"name":"Frizzled Nuclear Import Wnt Pathway","type":"exact"}],"termid":"GO:0140709"}


id: GO:0047565
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxypropanoate + NAD+ = 3-oxopropanoate + H+ + NADH.","definition_xrefs":["RHEA:13357","EC:1.1.1.59"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"3-hydroxypropionate dehydrogenase (NAD+) activity","secondary_identifiers":["KEGG_REACTION:R01608","MetaCyc:3-HYDROXYPROPIONATE-DEHYDROGENASE-RXN"],"synonyms":[{"name":"3-hydroxypropanoate:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0047565"}


id: MONDO:0007778
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A condition in which there is an abnormally increased distance between two organs or bodily parts; most often, this term is referring to an increased distance between the orbits (orbital hypertelorism).","definition_xrefs":["NCIT:C34715"],"gene_count":0,"genotype_count":0,"name":"obsolete hypertelorism (obsolete MONDO:0007778)","secondary_identifiers":["OMIM:145400","HP:0000316","MESH:D006972","ICD9:376.41","SCTID:22006008"],"synonyms":[{"name":"hypertelorism","type":"exact"},{"name":"hypertelorism of orbit","type":"exact"},{"name":"obsolete hypertelorism (disease)","type":"exact"}],"termid":"MONDO:0007778","xrefs":{"Monarch":{"xref_id":"0007778"}}}


id: MONDO:0019999
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete intestinal malformation (obsolete MONDO:0019999)","secondary_identifiers":["Orphanet:97945"],"termid":"MONDO:0019999","xrefs":{"Monarch":{"xref_id":"0019999"}}}


id: PBO:0059931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 17","termid":"PBO:0059931"}


id: MONDO:0013759
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited cancer-predisposing syndrome due to a gain-of-function germline mutation in the MITF gene, associated with a higher incidence of amelanotic and nodular melanoma, multiple primary melanomas and increase in nevus number and size. It may also predispose to co-occurring melanoma and renal cell carcinoma and to pancreatic cancer.","definition_xrefs":["Orphanet:293822"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"},{"relation_name":"excluded_subClassOf","term_name":"susceptibility to familial cutaneous melanoma","termid":"MONDO:0024462"},{"relation_name":"is_a","term_name":"susceptibility to familial cutaneous melanoma","termid":"MONDO:0024462"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanoma, cutaneous malignant, susceptibility to, 8","secondary_identifiers":["UMLS:C3152204","OMIM:614456","MEDGEN:463554"],"synonyms":[{"name":"CMM8","type":"related"},{"name":"MITF-related melanoma and renal cell carcinoma predisposition syndrome","type":"exact"},{"name":"melanoma and renal cell carcinoma, susceptibility to","type":"related"},{"name":"melanoma, cutaneous malignant, susceptibility to, 8","type":"exact"},{"name":"melanoma, cutaneous malignant, susceptibility to, type 8","type":"exact"},{"name":"susceptibility to cutaneous malignant melanoma 8","type":"related"}],"termid":"MONDO:0013759","xrefs":{"Monarch":{"xref_id":"0013759"}}}


id: PBO:0049543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2BC6 antisense RNA 1","termid":"PBO:0049543"}


id: PBO:0117029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRBA antisense RNA 1","termid":"PBO:0117029"}


id: GO:0045028
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a purine nucleotide and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.","definition_xrefs":["GOC:mah","PMID:9755289"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purinergic nucleotide receptor activity","termid":"GO:0001614"},{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"G protein-coupled purinergic nucleotide receptor activity","synonyms":[{"name":"G protein coupled purinergic nucleotide receptor activity","type":"exact"},{"name":"G-protein coupled purinergic nucleotide receptor activity","type":"exact"},{"name":"P2Y","type":"related"},{"name":"P2Y receptor","type":"related"},{"name":"purinergic nucleotide receptor activity, G protein coupled","type":"exact"},{"name":"purinergic nucleotide receptor activity, G-protein coupled","type":"exact"}],"termid":"GO:0045028"}


id: GO:1990271
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Combining with anti-Mullerian hormone to initiate a change in cell activity.","definition_xrefs":["PMID:23624077","GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete anti-Mullerian hormone (obsolete GO:1990271)","synonyms":[{"name":"anti-Mullerian hormone","type":"exact"}],"termid":"GO:1990271"}


id: PBO:0000411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit 4 (predicted)","termid":"PBO:0000411"}


id: PBO:0013441
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterochromatic mRNAs transcribed in cid14delta are not translated","termid":"PBO:0013441"}


id: GO:0005731
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A region of a chromosome where nucleoli form during interphase, and where genes encoding the largest rRNA precursor transcript are tandemly arrayed.","definition_xrefs":["PMID:14504406"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleolar chromatin","termid":"GO:0030874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005730"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005730","GO:0005634","GO:0005575","GO:0005694"],"is_obsolete":false,"name":"nucleolus organizer region","secondary_identifiers":["Wikipedia:Nucleolus_organizer_region"],"synonyms":[{"name":"NOR","type":"exact"},{"name":"nucleolus organiser region","type":"exact"},{"name":"nucleolus organizer complex","type":"related"}],"termid":"GO:0005731"}


id: MOD:00761
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of an amino acid residue or of a modifying group with one hexose sugar group through a glycosidic bond.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosylated residue","termid":"MOD:00434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"monohexosylated (Hex1)","synonyms":[{"name":"Hex1","type":"exact"}],"termid":"MOD:00761"}


id: GO:0046042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ITP, inosine triphosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide biosynthetic process","termid":"GO:0009152"},{"relation_name":"is_a","term_name":"purine ribonucleoside triphosphate biosynthetic process","termid":"GO:0009206"},{"relation_name":"is_a","term_name":"ITP metabolic process","termid":"GO:0046041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"ITP biosynthetic process","synonyms":[{"name":"ITP anabolism","type":"exact"},{"name":"ITP biosynthesis","type":"exact"},{"name":"ITP formation","type":"exact"},{"name":"ITP synthesis","type":"exact"}],"termid":"GO:0046042"}


id: PBO:0000925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase, NIMA related Fin1","termid":"PBO:0000925"}


id: PBO:0079751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridine-cytidine kinase 2","termid":"PBO:0079751"}


id: PBO:0090413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase (ubiquinone) cytochrome b subunit","termid":"PBO:0090413"}


id: GO:1902000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of homogentisate.","definition_xrefs":["GOC:TermGenie","PMID:22980205"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"homogentisate metabolic process","termid":"GO:1901999"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"homogentisate catabolic process","synonyms":[{"name":"homogentisate breakdown","type":"exact"},{"name":"homogentisate catabolism","type":"exact"},{"name":"homogentisate degradation","type":"exact"}],"termid":"GO:1902000"}


id: SO:0000300
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A location where a gene is rearranged due to recombination during mitosis or meiosis.","direct_ancestors":[{"relation_name":"is_a","term_name":"specific_recombination_site","termid":"SO:0000299"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recombination_feature_of_rearranged_gene","synonyms":[{"name":"recombination feature of rearranged gene","type":"exact"}],"termid":"SO:0000300"}


id: GO:0051821
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The movement of an organism from a second organism to another place in the environment, where the two organisms are in a symbiotic interaction. The first organism may also move to a different organism.","definition_xrefs":["GOC:cc"],"gene_count":0,"genotype_count":0,"name":"obsolete dissemination or transmission of organism from other organism involved in symbiotic interaction (obsolete GO:0051821)","synonyms":[{"name":"dissemination or transmission of organism from other organism during symbiotic interaction","type":"related"}],"termid":"GO:0051821"}


id: GO:1901305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of spermidine biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:pm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of polyamine biosynthetic process","termid":"GO:0170066"},{"relation_name":"is_a","term_name":"regulation of spermidine biosynthetic process","termid":"GO:1901304"},{"relation_name":"negatively_regulates","term_name":"spermidine biosynthetic process","termid":"GO:0008295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of spermidine biosynthetic process","synonyms":[{"name":"down regulation of spermidine anabolism","type":"exact"},{"name":"down regulation of spermidine biosynthesis","type":"exact"},{"name":"down regulation of spermidine biosynthetic process","type":"exact"},{"name":"down regulation of spermidine formation","type":"exact"},{"name":"down regulation of spermidine synthesis","type":"exact"},{"name":"down-regulation of spermidine anabolism","type":"exact"},{"name":"down-regulation of spermidine biosynthesis","type":"exact"},{"name":"down-regulation of spermidine biosynthetic process","type":"exact"},{"name":"down-regulation of spermidine formation","type":"exact"},{"name":"down-regulation of spermidine synthesis","type":"exact"},{"name":"downregulation of spermidine anabolism","type":"exact"},{"name":"downregulation of spermidine biosynthesis","type":"exact"},{"name":"downregulation of spermidine biosynthetic process","type":"exact"},{"name":"downregulation of spermidine formation","type":"exact"},{"name":"downregulation of spermidine synthesis","type":"exact"},{"name":"inhibition of spermidine anabolism","type":"exact"},{"name":"inhibition of spermidine biosynthesis","type":"exact"},{"name":"inhibition of spermidine biosynthetic process","type":"narrow"},{"name":"inhibition of spermidine formation","type":"exact"},{"name":"inhibition of spermidine synthesis","type":"exact"},{"name":"negative regulation of spermidine anabolism","type":"exact"},{"name":"negative regulation of spermidine biosynthesis","type":"exact"},{"name":"negative regulation of spermidine formation","type":"exact"},{"name":"negative regulation of spermidine synthesis","type":"exact"}],"termid":"GO:1901305"}


id: PBO:0001190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bouquet formation protein Bqt2","termid":"PBO:0001190"}


id: MONDO:0016730
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well differentiated, slow growing neuroepithelial neoplasm composed of neoplastic, mature ganglion cells.","definition_xrefs":["NCIT:C6934"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mixed neuronal-glial tumor","termid":"MONDO:0016729"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gangliocytoma","secondary_identifiers":["ICDO:9492/0","ONCOTREE:GNC","DOID:2426","Orphanet:251937","MESH:D005729","NANDO:2200097","SCTID:116371000119107","MEDGEN:1830324","GARD:10638","UMLS:C5779630"],"synonyms":[{"name":"GNC","type":"related"}],"termid":"MONDO:0016730","xrefs":{"Monarch":{"xref_id":"0016730"}}}


id: PBO:0059603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 15","termid":"PBO:0059603"}


id: GO:0106280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the UDP-N-acetylglucosamine biosynthetic process.","definition_xrefs":["PMID:32579556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"positive regulation of nucleobase-containing compound metabolic process","termid":"GO:0045935"},{"relation_name":"is_a","term_name":"positive regulation of phosphate metabolic process","termid":"GO:0045937"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of UDP-N-acetylglucosamine biosynthetic process","termid":"GO:0106278"},{"relation_name":"positively_regulates","term_name":"UDP-N-acetylglucosamine biosynthetic process","termid":"GO:0006048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"positive regulation of UDP-N-acetylglucosamine biosynthetic process","synonyms":[{"name":"positive egulation of UDP-N-acetylglucosamine formation","type":"related"},{"name":"positive regulation of UDP-GlcNAc biosynthetic process","type":"related"},{"name":"positive regulation of UDP-N-acetylglucosamine anabolism","type":"related"},{"name":"positive regulation of UDP-N-acetylglucosamine biosynthesis","type":"related"},{"name":"positive regulation of UDP-N-acetylglucosamine synthesis","type":"related"}],"termid":"GO:0106280"}


id: MONDO:0012063
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ulnar/fibula ray defect - brachydactyly syndrome is a very rare malformation syndrome characterized by ulnar hypoplasia associated with hypoplastic to absent fourth and/or fifth digits, fibular hypoplasia, short stature and facial dysmorphism.","definition_xrefs":["Orphanet:52056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ulnar/fibula ray defect-brachydactyly syndrome","secondary_identifiers":["MEDGEN:324890","GARD:16654","SCTID:719843001","OMIM:608571","MESH:C563905","UMLS:C1837830"],"synonyms":[{"name":"Morava-Mehes syndrome","type":"exact"},{"name":"ulnar/fibular RAY defect and brachydactyly","type":"related"}],"termid":"MONDO:0012063","xrefs":{"Monarch":{"xref_id":"0012063"}}}


id: FYPO:0005378
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which spindle pole body organization is normal (i.e. indistinguishable from wild type). Spindle pole body organization is a process that results in the assembly, arrangement of constituent parts, or disassembly of the spindle pole body (SPB).","definition_xrefs":["GO:0051300","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal cell cycle process","termid":"FYPO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal spindle pole body organization","synonyms":[{"name":"normal SPB organization","type":"exact"},{"name":"normal spindle pole body organisation","type":"exact"}],"termid":"FYPO:0005378"}


id: PBO:0068066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 371","termid":"PBO:0068066"}


id: PBO:0034627
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_transcription","termid":"PBO:0034627"}


id: PBO:0027655
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_cycle_regulation_during_cellular_response_to_ionizing_radiation_during_mitotic_G2_phase","termid":"PBO:0027655"}


id: PBO:0045260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DND microRNA-mediated repression inhibitor 1","termid":"PBO:0045260"}


id: MONDO:0002991
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma arising from the ovary. It is characterized by the presence of malignant epithelial cells in a fibrotic stroma. Histologic variants include clear cell, serous, mucinous, and endometrioid adenocarcinofibroma.","definition_xrefs":["NCIT:C40035"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female reproductive organ cancer","termid":"MONDO:0001416"},{"relation_name":"is_a","term_name":"malignant mixed neoplasm","termid":"MONDO:0005853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adenocarcinofibroma","secondary_identifiers":["DOID:4422","MEDGEN:266966","UMLS:C1510778"],"synonyms":[{"name":"adenocarcinofibroma","type":"exact"},{"name":"adenofibroma, malignant","type":"exact"},{"name":"malignant adenofibroma","type":"exact"}],"termid":"MONDO:0002991","xrefs":{"Monarch":{"xref_id":"0002991"}}}


id: MONDO:0000775
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Immunologically mediated adverse reactions to medicinal substances used legally or illegally.","definition_xrefs":["MESH:D004342"],"direct_ancestors":[{"relation_name":"is_a","term_name":"allergic disease","termid":"MONDO:0005271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"drug allergy","secondary_identifiers":["MEDGEN:41663","UMLS:C0013182","DOID:0060500","EFO:0009482"],"synonyms":[{"name":"allergy of exposure to drug","type":"exact"},{"name":"exposure to drug allergic disease","type":"exact"}],"termid":"MONDO:0000775","xrefs":{"Monarch":{"xref_id":"0000775"}}}


id: GO:0030079
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Bacteriochlorophyll a binding complex that is peripherally associated to the bacterial reaction center.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane light-harvesting complex","termid":"GO:0030077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"light-harvesting complex, peripheral complex","termid":"GO:0030079"}


id: GO:0001545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Increase in size of primary follicles including oocyte growth and granulosa and/or theca cell proliferation until more than one layer of granulosa cells is present (preantral follicle).","definition_xrefs":["GOC:mtg_mpo"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovulation cycle process","termid":"GO:0022602"},{"relation_name":"is_a","term_name":"developmental growth","termid":"GO:0048589"},{"relation_name":"part_of","term_name":"ovarian follicle development","termid":"GO:0001541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary ovarian follicle growth","termid":"GO:0001545"}


id: PBO:0062655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 13 subfamily C member 5","termid":"PBO:0062655"}


id: GO:0008487
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete prenyl-dependent CAAX protease activity (obsolete GO:0008487)","synonyms":[{"name":"prenyl-dependent CAAX protease activity","type":"exact"}],"termid":"GO:0008487"}


id: PATO:0001963
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curled quality inhering in a bearer by virtue of the bearer's edges of its surface being rolled backwards spirally on each side.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curled","termid":"PATO:0000405"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"revolute","termid":"PATO:0001963"}


id: PBO:0061065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium/potassium transporting ATPase interacting 4","termid":"PBO:0061065"}


id: SO:0001454
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A negatively charged, hydorophilic amino acid encoded by the codons GAA and GAG.","direct_ancestors":[{"relation_name":"is_a","term_name":"amino_acid","termid":"SO:0001237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamic_acid","synonyms":[{"name":"E","type":"exact"},{"name":"Glu","type":"exact"},{"name":"glutamic acid","type":"exact"}],"termid":"SO:0001454"}


id: GO:0047217
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: Catalysis of the reaction: sucrose + 1,6-alpha-D-glucosyl(n) = 1,6-alpha-D-glucosyl(n+1) + fructose.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete sucrose-1,6-alpha-glucan 3(6)-alpha-glucosyltransferase activity (obsolete GO:0047217)","termid":"GO:0047217"}


id: MONDO:1010051
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diabetes insipidus that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal disease, non-human animal","termid":"MONDO:1011909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diabetes insipidus, non-human animal","secondary_identifiers":["OMIA:000278"],"termid":"MONDO:1010051","xrefs":{"Monarch":{"xref_id":"1010051"}}}


id: MONDO:0003492
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma that involves the lacrimal gland.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lacrimal gland carcinoma","termid":"MONDO:0002463"},{"relation_name":"is_a","term_name":"head and neck squamous cell carcinoma","termid":"MONDO:0010150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004992"],"is_obsolete":false,"name":"lacrimal gland squamous cell carcinoma","secondary_identifiers":["DOID:5529","UMLS:C1334360","MEDGEN:233607","NCIT:C6092"],"synonyms":[{"name":"epidermoid carcinoma of lacrimal gland","type":"exact"},{"name":"epidermoid carcinoma of the lacrimal gland","type":"exact"},{"name":"lacrimal gland epidermoid carcinoma","type":"exact"},{"name":"lacrimal gland squamous cell carcinoma","type":"exact"},{"name":"squamous cell carcinoma of lacrimal gland","type":"exact"},{"name":"squamous cell carcinoma of the lacrimal gland","type":"exact"}],"termid":"MONDO:0003492","xrefs":{"Monarch":{"xref_id":"0003492"}}}


id: MONDO:0003402
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-seminomatous malignant germ cell tumor arising from the testis. It affects infants, young children, and postpubertal males. It is the most frequently seen testicular neoplasm during childhood. The vast majority of patients present with an asymptomatic scrotal mass. The tumor mimics the yolk sac of the embryo and produces alpha-fetoprotein (AFP). It metastasizes to distant anatomic sites. Prognostic factors relate to the clinical stage and the degree of AFP elevation.","definition_xrefs":["NCIT:C8000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"testicular pure germ cell tumor","termid":"MONDO:0002874"},{"relation_name":"is_a","term_name":"testicular non-seminomatous germ cell cancer","termid":"MONDO:0003403"},{"relation_name":"is_a","term_name":"yolk sac tumor","termid":"MONDO:0005744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"testicular yolk sac tumor","secondary_identifiers":["MEDGEN:79028","DOID:5344","ONCOTREE:TYST","UMLS:C0279708","EFO:1000574"],"synonyms":[{"name":"Orchidoblastoma","type":"related"},{"name":"endodermal sinus neoplasm of testis","type":"related"},{"name":"endodermal sinus neoplasm of the testis","type":"related"},{"name":"endodermal sinus tumor of testis","type":"related"},{"name":"endodermal sinus tumor of the testis","type":"related"},{"name":"endodermal sinus tumour of testis","type":"related"},{"name":"endodermal sinus tumour of the testis","type":"related"},{"name":"endodermal-sinus tumor","type":"related"},{"name":"endodermal-sinus tumour","type":"related"},{"name":"testicular endodermal sinus neoplasm","type":"related"},{"name":"testicular endodermal sinus tumor","type":"related"},{"name":"testicular endodermal sinus tumour","type":"related"},{"name":"testicular yolk Sac neoplasm","type":"exact"},{"name":"testicular yolk sac tumor","type":"exact"},{"name":"testis yolk sac tumor","type":"exact"},{"name":"testis yolk sac tumour","type":"exact"},{"name":"yolk Sac neoplasm of testis","type":"related"},{"name":"yolk Sac neoplasm of the testis","type":"related"},{"name":"yolk Sac tumor of testis","type":"related"},{"name":"yolk Sac tumor of the testis","type":"related"},{"name":"yolk Sac tumour of testis","type":"related"},{"name":"yolk Sac tumour of the testis","type":"related"},{"name":"yolk sac tumor","type":"related"},{"name":"yolk sac tumour","type":"related"}],"termid":"MONDO:0003402","xrefs":{"Monarch":{"xref_id":"0003402"}}}


id: PR:P87323
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mcs4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"response regulator mcs4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC887.10","synonyms":[{"name":"Spom972h-mcs4","type":"exact"},{"name":"mitotic catastrophe suppressor 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87323"}


id: GO:2000802
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of endocardial cushion to mesenchymal transition involved in heart valve formation.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of endocardial cushion to mesenchymal transition","termid":"GO:0140051"},{"relation_name":"is_a","term_name":"regulation of endocardial cushion to mesenchymal transition involved in heart valve formation","termid":"GO:2000800"},{"relation_name":"positively_regulates","term_name":"endocardial cushion to mesenchymal transition involved in heart valve formation","termid":"GO:0003199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of endocardial cushion to mesenchymal transition involved in heart valve formation","synonyms":[{"name":"positive regulation of endocardial cushion to mesenchymal transition involved in valve formation","type":"exact"}],"termid":"GO:2000802"}


id: PBO:0082080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5' exoribonuclease required for 5' end processing of pre-60S rRNA; binds late pre-60S ribosomes, accompanying them from nucleolus to nuclear periphery; required for cell viability under standard (aerobic) conditions but not under anaerobic conditions; yeast null mutant is complemented by expression of human homolog NOL12","termid":"PBO:0082080"}


id: GO:0018337
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via L-2',4',5'-topaquinone (obsolete GO:0018337)","synonyms":[{"name":"enzyme active site formation via L-2',4',5'-topaquinone","type":"exact"}],"termid":"GO:0018337"}


id: GO:0031236
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of a plasma membrane consisting of gene products and protein complexes that are loosely bound to its periplasmic surface, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:mtg_sensu","GOC:mah","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of external side of plasma membrane","termid":"GO:0031232"},{"relation_name":"part_of","term_name":"periplasmic side of plasma membrane","termid":"GO:0098567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"part_of","termid":"GO:0009986"}],"interesting_parent_ids":["GO:0005886","GO:0009986","GO:0005575"],"is_obsolete":false,"name":"extrinsic component of periplasmic side of plasma membrane","secondary_identifiers":["GO:0031238"],"synonyms":[{"name":"extrinsic to external leaflet of plasma membrane, in periplasmic space","type":"narrow"},{"name":"extrinsic to external side of plasma membrane, in periplasmic space","type":"narrow"}],"termid":"GO:0031236"}


id: GO:0047782
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + coniferin = D-glucose + coniferol.","definition_xrefs":["EC:3.2.1.126","MetaCyc:CONIFERIN-BETA-GLUCOSIDASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucosidase activity","termid":"GO:0008422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016798","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"coniferin beta-glucosidase activity","secondary_identifiers":["RHEA:12252"],"synonyms":[{"name":"coniferin b-glucosidase activity","type":"exact"},{"name":"coniferin beta-D-glucosidase activity","type":"related"},{"name":"coniferin-hydrolyzing beta-glucosidase activity","type":"related"}],"termid":"GO:0047782"}


id: GO:1902919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of poly(5-hydroxyvalerate).","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators","PMID:21705209","GO_REF:0000068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poly(5-hydroxyvalerate) metabolic process","termid":"GO:1902918"},{"relation_name":"is_a","term_name":"poly(hydroxyvalerate) biosynthetic process","termid":"GO:1902921"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"poly(5-hydroxyvalerate) biosynthetic process","synonyms":[{"name":"poly(5-hydroxyvalerate) anabolism","type":"exact"},{"name":"poly(5-hydroxyvalerate) biosynthesis","type":"exact"},{"name":"poly(5-hydroxyvalerate) formation","type":"exact"},{"name":"poly(5-hydroxyvalerate) synthesis","type":"exact"}],"termid":"GO:1902919"}


id: PBO:0062990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphofurin acidic cluster sorting protein 1","termid":"PBO:0062990"}


id: GO:0050018
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an L-amino acid + H2O + NAD+ = a 2-oxo acid + NH3 + NADH.","definition_xrefs":["EC:1.4.1.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor","termid":"GO:0016639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"L-amino-acid dehydrogenase activity","secondary_identifiers":["MetaCyc:L-AMINO-ACID-DEHYDROGENASE-RXN","RHEA:10396"],"synonyms":[{"name":"L-amino-acid:NAD+ oxidoreductase (deaminating)","type":"related"}],"termid":"GO:0050018"}


id: PBO:0050025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DQ alpha 1","termid":"PBO:0050025"}


id: PBO:0044264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X-C motif chemokine ligand 2","termid":"PBO:0044264"}


id: FYPO:0005857
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of antisense RNA measured in a cell differs from normal when the cell is in the vegetative growth phase of the life cycle. Total antisense RNA or a specific antisense RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered mature ncRNA level during vegetative growth","termid":"FYPO:0006465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"altered antisense RNA level during vegetative growth","synonyms":[{"name":"abnormal antisense RNA level during vegetative growth","type":"exact"},{"name":"altered antisense RNA level during mitotic cell cycle","type":"related"},{"name":"altered antisense RNA transcript level during vegetative growth","type":"exact"},{"name":"altered cellular antisense RNA level during vegetative growth","type":"exact"}],"termid":"FYPO:0005857"}


id: PR:O94498
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC18E5.08 gene.","definition_xrefs":["UniProtKB:O94498","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized N-acetyltransferase C18E5.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18E5.08","synonyms":[{"name":"Spom972h-SPBC18E5.08","type":"exact"}],"termid":"PR:O94498"}


id: GO:0019480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-alanine to pyruvate, with D-alanine as an intermediate.","definition_xrefs":["MetaCyc:ALADEG-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-alanine catabolic process","termid":"GO:0042853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"L-alanine oxidation to pyruvate via D-alanine","termid":"GO:0019480"}


id: MONDO:1011542
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ichthyosis that occurs in greater kudu.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ichthyosis, non-human animal","termid":"MONDO:1011427"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ichthyosis, greater kudu","secondary_identifiers":["OMIA:001993-9946"],"termid":"MONDO:1011542","xrefs":{"Monarch":{"xref_id":"1011542"}}}


id: PBO:0027628
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_transposable_element-derived_small_RNA_level","termid":"PBO:0027628"}


id: PBO:0063288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin gamma subfamily B, 2","termid":"PBO:0063288"}


id: MONDO:0000031
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete fatty liver disease, nonalcoholic (obsolete MONDO:0000031)","termid":"MONDO:0000031","xrefs":{"Monarch":{"xref_id":"0000031"}}}


id: MONDO:0035423
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neutral lipid storage disease","termid":"MONDO:0015611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002561","MONDO:0002525"],"is_obsolete":false,"name":"triglyceride deposit cardiomyovasculopathy","secondary_identifiers":["MEDGEN:1830096","UMLS:C5680124","ICD10CM:E75.5","Orphanet:565612","SCTID:1279844009","GARD:22267"],"synonyms":[{"name":"Neutral lipid storage disease with severe cardiovascular involvement","type":"exact"},{"name":"TGCV","type":"exact"}],"termid":"MONDO:0035423","xrefs":{"Monarch":{"xref_id":"0035423"}}}


id: PBO:0027642
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_transcription_of_pheromone_response_gene_mRNA_during_vegetative_growth","termid":"PBO:0027642"}


id: MONDO:0007866
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"diffuse palmoplantar keratoderma","termid":"MONDO:0017666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Bart-Pumphrey syndrome","secondary_identifiers":["Orphanet:2698","MEDGEN:82727","ICD9:759.89","GARD:3125","MESH:C537210","UMLS:C0266004","SCTID:1271009","OMIM:149200","DOID:0050658"],"synonyms":[{"name":"Bart-Pumphrey syndrome","type":"exact"},{"name":"knuckle pads, leuconychia and sensorineural deafness","type":"related"},{"name":"knuckle pads, leukonychia, and sensorineural deafness","type":"exact"},{"name":"knuckle pads-leukonychia-sensorineural deafness-palmoplantar hyperkeratosis syndrome","type":"related"},{"name":"knuckle pads-leukonychia-sensorineural deafness-palmoplantar keratoderma syndrome","type":"exact"}],"termid":"MONDO:0007866","xrefs":{"Monarch":{"xref_id":"0007866"}}}


id: PR:Q9UTC5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An uncharacterized protein YggC that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00205"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridine kinase C227.14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC227.14","secondary_identifiers":["UniProtKB:Q9UTC5"],"synonyms":[{"name":"Spom972h-yggC","type":"exact"}],"termid":"PR:Q9UTC5"}


id: PBO:0087775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of UAF (upstream activation factor) complex; UAF is an RNA polymerase I specific transcription stimulatory factor composed of Uaf30p, Rrn5p, Rrn9p, Rrn10p, histones H3 and H4; targeting factor for the UAF that facilitates activation of many rDNA genes; deletion decreases cellular growth rate; UAF30 has a paralog, TRI1, that arose from the whole genome duplication","termid":"PBO:0087775"}


id: GO:0014710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of somitomeric trunk muscle development. The somitomeric trunk muscle is derived from somitomeric mesoderm. The muscle begins its development with the differentiation of the muscle cells and ends with the mature muscle.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of somitomeric trunk muscle development","termid":"GO:0014708"},{"relation_name":"is_a","term_name":"negative regulation of muscle organ development","termid":"GO:0048635"},{"relation_name":"negatively_regulates","term_name":"somitomeric trunk muscle development","termid":"GO:0002075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of somitomeric trunk muscle development","termid":"GO:0014710"}


id: PBO:0030749
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_response_to_arsenic","termid":"PBO:0030749"}


id: PBO:0067586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 745, pseudogene","termid":"PBO:0067586"}


id: MONDO:0859199
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmental delay with or without intellectual impairment or behavioral abnormalities","secondary_identifiers":["OMIM:619575","UMLS:C5562004","MEDGEN:1794214"],"termid":"MONDO:0859199","xrefs":{"Monarch":{"xref_id":"0859199"}}}


id: FYPO:0000885
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the trimethylation of lysine at position 9 of histone H3 in centromere outer repeat regions is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 trimethylation at centromere during vegetative growth","termid":"FYPO:0000864"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0002274","FYPO:0005447","FYPO:0001320","FYPO:0002494"],"is_obsolete":false,"name":"abnormal histone H3-K9 trimethylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"abnormal histone H3 K9 trimethylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"abnormal histone H3-K9 trimethylation at centromere otr during vegetative growth","type":"exact"},{"name":"abnormal histone H3-K9 trimethylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"abnormal histone H3-K9 trimethylation at pericentric region during vegetative growth","type":"related"},{"name":"abnormal histone H3-K9 trimethylation at pericentromeric region during vegetative growth","type":"related"},{"name":"abnormal histone H3K9 trimethylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"abnormal histone H3K9me3 at centromere outer repeat during vegetative growth","type":"exact"},{"name":"abnormal histone lysine H3 K9 trimethylation at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0000885"}


id: MONDO:0001611
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dacryocystitis","termid":"MONDO:0004926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"phlegmonous dacryocystitis","secondary_identifiers":["MEDGEN:509864","ICD9:375.33","UMLS:C0155238","ICD10CM:H04.31","SCTID:64324003","DOID:12997"],"termid":"MONDO:0001611","xrefs":{"Monarch":{"xref_id":"0001611"}}}


id: GO:0004134
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a segment of a (1->4)-alpha-D-glucan to a new 4-position in an acceptor, which may be glucose or (1->4)-alpha-D-glucan.","definition_xrefs":["EC:2.4.1.25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"4-alpha-glucanotransferase activity","secondary_identifiers":["Reactome:R-HSA-71552"],"synonyms":[{"name":"1,4-alpha-D-glucan:1,4-alpha-D-glucan 4-alpha-D-glycosyltransferase activity","type":"related"},{"name":"D-enzyme activity","type":"related"},{"name":"amylomaltase activity","type":"related"},{"name":"debranching enzyme maltodextrin glycosyltransferase activity","type":"related"},{"name":"dextrin glycosyltransferase activity","type":"related"},{"name":"dextrin transglycosylase activity","type":"related"},{"name":"disproportionating enzyme activity","type":"related"},{"name":"oligo-1,4-1,4-glucantransferase activity","type":"related"}],"termid":"GO:0004134"}


id: GO:0046464
data:
  {"annotated_genes":["SJAG_03604","SJAG_02089","SJAG_01036","SJAG_02543"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100281,119449,93712,73228],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019433"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of acylglycerol, any mono-, di- or triester of glycerol with (one or more) fatty acids.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylglycerol metabolic process","termid":"GO:0006639"},{"relation_name":"is_a","term_name":"neutral lipid catabolic process","termid":"GO:0046461"},{"relation_name":"is_a","term_name":"glycerolipid catabolic process","termid":"GO:0046503"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01036":null,"SJAG_02089":null,"SJAG_02543":null,"SJAG_03604":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"acylglycerol catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"acylglycerol breakdown","type":"exact"},{"name":"acylglycerol catabolism","type":"exact"},{"name":"acylglycerol degradation","type":"exact"}],"termid":"GO:0046464","terms_by_termid":{"GO:0019433":null}}


id: PBO:0077043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thrombopoietin","termid":"PBO:0077043"}


id: PBO:0049542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 6","termid":"PBO:0049542"}


id: PBO:0117433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zDHHC palmitoyltransferase 24","termid":"PBO:0117433"}


id: MONDO:0010605
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemopoietic proliferation","secondary_identifiers":["UMLS:C1844026","MEDGEN:336101","OMIM:306930"],"synonyms":[{"name":"hemopoietic proliferation","type":"exact"}],"termid":"MONDO:0010605","xrefs":{"Monarch":{"xref_id":"0010605"}}}


id: MONDO:0001589
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete vaginal enterocele (obsolete MONDO:0001589)","secondary_identifiers":["SCTID:398061002","DOID:1283","MESH:D006547","ICD9:618.6"],"synonyms":[{"name":"enterocele","type":"broad"},{"name":"vaginal hernia","type":"related"}],"termid":"MONDO:0001589","xrefs":{"Monarch":{"xref_id":"0001589"}}}


id: PBO:0048454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRIP and coiled-coil domain containing 1","termid":"PBO:0048454"}


id: PBO:0061213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOL4L divergent transcript","termid":"PBO:0061213"}


id: PBO:0046163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELF2 pseudogene 3","termid":"PBO:0046163"}


id: MONDO:0013277
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any early infantile epileptic encephalopathy in which the cause of the disease is a mutation in the SPTAN1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"infantile spasms","termid":"MONDO:0018097"},{"relation_name":"is_a","term_name":"infantile spasms","termid":"MONDO:0018097"},{"relation_name":"is_a","term_name":"genetic developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 5","secondary_identifiers":["MEDGEN:462081","DOID:0080438","GARD:12949","OMIM:613477","UMLS:C3150731"],"synonyms":[{"name":"DEE5","type":"exact"},{"name":"EIEE5","type":"exact"},{"name":"SPTAN1 early infantile epileptic encephalopathy","type":"exact"},{"name":"developmental and epileptic encephalopathy 5","type":"exact"},{"name":"early infantile epileptic encephalopathy caused by mutation in SPTAN1","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 5","type":"exact"},{"name":"epileptic encephalopathy, early infantile, type 5","type":"exact"}],"termid":"MONDO:0013277","xrefs":{"Monarch":{"xref_id":"0013277"}}}


id: PBO:0055899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 20","termid":"PBO:0055899"}


id: SO:0002126
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variable gene that rearranges at the DNA level and codes the variable region of the variable domain of an Immunoglobulin chain.","definition_xrefs":["IGMT:http://www.imgt.org/IMGTScientificChart/SequenceDescription/Keywords.php","GENCODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin_gene","termid":"SO:0002122"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IG_V_gene","synonyms":[{"name":"IGV_gene","type":"exact"},{"name":"IG_variable_gene","type":"exact"},{"name":"Immunoglobulin_variable_gene","type":"exact"}],"termid":"SO:0002126"}


id: PBO:0003059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgin subfamily A member","termid":"PBO:0003059"}


id: MONDO:0020439
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A persistent opening in the atrial septum after birth. While a normal part of fetal circulation, the foramen ovale should close once the newborn begins breathing and the pressure in the left atrium exceeds that of the right atrium. While a PFO is generally asymptomatic, it can lead to the passage of clots from the venous circulation into the artierial circulation, resulting in paradoxical emboli, and possible strokes.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrial septal defect","termid":"MONDO:0006664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"patent foramen ovale","secondary_identifiers":["MEDGEN:8891","MedDRA:10016982","NCIT:C34619","HP:0001655","MESH:D054092","Orphanet:99108","NANDO:2200266","UMLS:C0016522","DOID:13620"],"synonyms":[{"name":"atrial septal defect within oval fossa","type":"exact"},{"name":"defect, patent or persistent, ostium secundum","type":"exact"},{"name":"foramen ovale patent","type":"exact"},{"name":"ostium secundum type atrial septal defect","type":"exact"},{"name":"patent foramen ovale","type":"exact"},{"name":"patent foramen ovale (disease)","type":"exact"},{"name":"persistent ostium secundum","type":"exact"}],"termid":"MONDO:0020439","xrefs":{"Monarch":{"xref_id":"0020439"}}}


id: PBO:0090142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2-type precatalytic spliceosome WW domain-binding protein Wbp4","termid":"PBO:0090142"}


id: GO:0007140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell cycle process by which the cell nucleus divides as part of a meiotic cell cycle in the male germline.","definition_xrefs":["GOC:dph","GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic nuclear division","termid":"GO:0140013"},{"relation_name":"part_of","term_name":"male gamete generation","termid":"GO:0048232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0140013","GO:0008150"],"is_obsolete":false,"name":"male meiotic nuclear division","synonyms":[{"name":"male meiosis","type":"related"},{"name":"male nuclear division","type":"broad"}],"termid":"GO:0007140"}


id: PBO:0084892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial translational activator specific for the COX2 mRNA; located in the mitochondrial inner membrane","termid":"PBO:0084892"}


id: GO:1900871
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent alteration within the chloroplast of one or more nucleotides within an mRNA to produce an mRNA molecule with a sequence that differs from that coded genetically.","definition_xrefs":["PMID:1653905","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA modification","termid":"GO:0016556"},{"relation_name":"is_a","term_name":"chloroplast RNA modification","termid":"GO:1900865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016071","GO:0008150"],"is_obsolete":false,"name":"chloroplast mRNA modification","synonyms":[{"name":"chloroplast mRNA editing","type":"narrow"},{"name":"mRNA editing in chloroplast","type":"narrow"}],"termid":"GO:1900871"}


id: GO:0019377
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glycolipid, a class of 1,2-di-O-acylglycerols joined at oxygen 3 by a glycosidic linkage to a carbohydrate part (usually a mono-, di- or tri-saccharide).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolipid metabolic process","termid":"GO:0006664"},{"relation_name":"is_a","term_name":"membrane lipid catabolic process","termid":"GO:0046466"},{"relation_name":"is_a","term_name":"carbohydrate derivative catabolic process","termid":"GO:1901136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"glycolipid catabolic process","synonyms":[{"name":"glycolipid breakdown","type":"exact"},{"name":"glycolipid catabolism","type":"exact"},{"name":"glycolipid degradation","type":"exact"}],"termid":"GO:0019377"}


id: GO:0010140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The pathway by which adenine, hypoxanthine and their nucleosides from purine nucleotides breakdown are converted back to purine nucleotides. The salvage pathway is important where there is no de-novo purine nucleotide biosynthesis.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete adenine, hypoxanthine and their nucleoside salvage (obsolete GO:0010140)","synonyms":[{"name":"adenine, hypoxanthine and their nucleoside salvage","type":"exact"}],"termid":"GO:0010140"}


id: PATO:0002499
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed posteriorly.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"posterior orientation","synonyms":[{"name":"posteriorly directed","type":"exact"}],"termid":"PATO:0002499"}


id: MONDO:0015049
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Solitary necrotic tumor of the liver is a rare nonmalignant hepatic lesion characterized by a mass with a completely necrotic core often partially calcified, surrounded by a dense hyalinized fibrous capsule containing elastin fibers. Patients are usually asymptomatic but some may suffer from intermittent abdominal pain or discomfort.","definition_xrefs":["Orphanet:100035"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liver and intrahepatic bile duct neoplasm","termid":"MONDO:0024477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"solitary necrotic nodule of the liver","secondary_identifiers":["SCTID:447058001","GARD:19743","UMLS:C2960192","icd11.foundation:209168589","MEDGEN:755361"],"synonyms":[{"name":"hepatic solitary necrotic nodule","type":"exact"}],"termid":"MONDO:0015049","xrefs":{"Monarch":{"xref_id":"0015049"}}}


id: MONDO:0100334
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete viral infectious disease or sequela (obsolete MONDO:0100334)","termid":"MONDO:0100334","xrefs":{"Monarch":{"xref_id":"0100334"}}}


id: PBO:0043793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic polyadenylation element binding protein 4","termid":"PBO:0043793"}


id: PBO:0062451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 121 pseudogene","termid":"PBO:0062451"}


id: PBO:0054336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1729","termid":"PBO:0054336"}


id: GO:0002786
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of antibacterial peptide production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antimicrobial peptide production","termid":"GO:0002784"},{"relation_name":"regulates","term_name":"antibacterial peptide production","termid":"GO:0002778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of antibacterial peptide production","termid":"GO:0002786"}


id: FYPO:0006492
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which chitin synthase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal chitin synthase activity","termid":"FYPO:0006491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000652","FYPO:0000654","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"abolished chitin synthase activity","synonyms":[{"name":"chitin synthase activity abolished","type":"exact"}],"termid":"FYPO:0006492"}


id: PBO:0051456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 7-35 (pseudogene)","termid":"PBO:0051456"}


id: MOD:01784
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to N,N,N-trimethyl-L-serine.","definition_xrefs":["PubMed:20668449","PubMed:3979397","RESID:AA0535"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-amino trimethylated protonated-residue","termid":"MOD:01698"},{"relation_name":"is_a","term_name":"N-methylated serine","termid":"MOD:01800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N,N,N-trimethyl-L-serine","synonyms":[{"name":"(1S)-1-carboxy-2-hydroxy-N,N,N-trimethylethanaminium","type":"exact"},{"name":"(1S)-1-carboxy-2-hydroxy-N,N,N-trimethylethanazanium","type":"exact"},{"name":"(2S)-2-trimethylammonio-3-hydroxypropanoic acid","type":"exact"},{"name":"MOD_RES N,N,N-trimethylserine","type":"exact"},{"name":"N,N,N-trimethyl-L-serine","type":"exact"},{"name":"N,N,N-trimethylserine cation","type":"exact"},{"name":"N,N,N-trimethylserinium","type":"exact"}],"termid":"MOD:01784"}


id: PBO:0113188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Low-affinity inorganic phosphate (Pi) transporter; acts upstream of Pho81p in regulation of PHO pathway; targeted to vacuole via AP-3 pathway; expression is independent of Pi concentration and Pho4p activity; contains 12 membrane-spanning segments; PHO87 has a paralog, PHO90, that arose from the whole genome duplication","termid":"PBO:0113188"}


id: RO:0002285
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x developmentally replaces y if and only if there is some developmental process that causes x to move or to cease to exist, and for the site that was occupied by x to become occupied by y, where y either comes into existence in this site or moves to this site from somewhere else","direct_ancestors":[{"relation_name":"is_a","term_name":"developmentally_preceded_by","termid":"RO:0002258"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmentally_replaces","termid":"RO:0002285"}


id: GO:0016143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving S-glycosides, any compound in which a glycosyl group has been substituted into a thiol group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"glycosyl compound metabolic process","termid":"GO:1901657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"S-glycoside metabolic process","synonyms":[{"name":"S-glycoside metabolism","type":"exact"},{"name":"thioglycoside metabolic process","type":"exact"},{"name":"thioglycoside metabolism","type":"exact"}],"termid":"GO:0016143"}


id: FYPO:0006246
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is increased during a cellular response to osmotic stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to nucleus during vegetative growth","termid":"FYPO:0001130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"increased protein localization to nucleus during cellular response to osmotic stress","synonyms":[{"name":"increased protein localisation to nucleus during cellular response to osmotic stress during vegetative growth","type":"exact"},{"name":"increased protein localization to nucleus during cellular response to osmotic stress during mitotic cell cycle","type":"related"},{"name":"increased protein localization to nucleus during osmotic stress","type":"exact"}],"termid":"FYPO:0006246"}


id: MONDO:0018468
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Proton-pump inhibitor-responsive esophageal eosinophilia (PPI-REE) is a rare, gastroenterologic disease characterized by typical clinical, endoscopic and histological features of eosinophilic oesophagitis (i.e. symptomatic oesophageal dysfunction associated with eosinophil-predominant mucose infiltrate) which completely remits upon proton pump inhibitor therapy.","definition_xrefs":["Orphanet:411696"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eosinophilic gastrointestinal disease","termid":"MONDO:0018438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"proton-pump inhibitor-responsive esophageal eosinophilia","secondary_identifiers":["UMLS:C4749332","GARD:21735","MEDGEN:1669432"],"synonyms":[{"name":"PPI-REE","type":"exact"},{"name":"PPI-responsive esophageal eosinophilia","type":"exact"},{"name":"PPIRee","type":"exact"}],"termid":"MONDO:0018468","xrefs":{"Monarch":{"xref_id":"0018468"}}}


id: PBO:0059552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded tRNA-Ser (AGU/C) 2","termid":"PBO:0059552"}


id: GO:1902421
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving H2 (dihydrogen).","definition_xrefs":["PMID:20692761","GOC:mengo_curators","PMID:20395274","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hydrogen metabolic process","synonyms":[{"name":"H2 metabolism","type":"exact"},{"name":"dihydrogen metabolism","type":"exact"},{"name":"molecular hydrogen metabolism","type":"exact"}],"termid":"GO:1902421"}


id: GO:0050526
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + poly[(R)-3-hydroxybutanoate](n) = poly[(R)-3-hydroxybutanoate](x) + poly[(R)-3-hydroxybutanoate](n-x); x is 1-5.","definition_xrefs":["EC:3.1.1.75","MetaCyc:3.1.1.75-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"poly(3-hydroxybutyrate) depolymerase activity","secondary_identifiers":["RHEA:11248"],"synonyms":[{"name":"PHB depolymerase activity","type":"related"},{"name":"poly((R)-hydroxyalkanoic acid) depolymerase activity","type":"broad"},{"name":"poly(3HB) depolymerase activity","type":"related"},{"name":"poly(HA(SCL)) depolymerase activity","type":"related"},{"name":"poly(HA) depolymerase activity","type":"related"},{"name":"poly(HASCL) depolymerase activity","type":"related"},{"name":"poly[(R)-3-hydroxybutyrate] hydrolase activity","type":"related"},{"name":"poly[(R)-hydroxyalkanoic acid] depolymerase","type":"broad"}],"termid":"GO:0050526"}


id: PBO:0000816
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.8.1","termid":"PBO:0000816"}


id: PBO:0120133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral ER membrane protein, regulates phospholipid metabolism; one of 6 proteins (Ist2p, Scs2p, Scs22p, Tcb1p, Tcb2p, Tcb3p) that connect the ER to the plasma membrane (PM); regulates PI4P levels by controlling access of Sac1p to PM substrate PI4P; interacts with FFAT motifs in Opi1p, Swh1p, Osh2p and Osh3p; role in NVJ integrity and micronucleophagy; role in telomeric silencing; VAMP-associated protein (VAP) homolog; SCS2 has a paralog, SCS22, that arose from the whole genome duplication","termid":"PBO:0120133"}


id: GO:0098817
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that leads to a temporary increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell induced by the evoked release of many vesicles of excitatory neurotransmitter at the synapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"excitatory postsynaptic potential","termid":"GO:0060079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"evoked excitatory postsynaptic potential","termid":"GO:0098817"}


id: PBO:0074237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 49 member 4","termid":"PBO:0074237"}


id: GO:0005751
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. Contains the 13 polypeptide subunits of cytochrome c oxidase, including cytochrome a and cytochrome a3. Catalyzes the oxidation of reduced cytochrome c by dioxygen (O2).","definition_xrefs":["ISBN:0198547684","GOC:mtg_sensu"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial respiratory chain complex IV (obsolete GO:0005751)","termid":"GO:0005751"}


id: GO:1990534
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-methyl-5'-thioadenosine + thermospermine + H+ = S-adenosyl 3-(methylthio)propylamine + spermidine.","definition_xrefs":["RHEA:57836","PMID:24906355"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine oxidase activity","termid":"GO:0046592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"thermospermine oxidase activity","termid":"GO:1990534"}


id: PBO:0047655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 7","termid":"PBO:0047655"}


id: PBO:0084445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Maltose permease; part of the complex locus MAL4","termid":"PBO:0084445"}


id: MONDO:0033282
data:
  {"annotated_genes":["SJAG_03701"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87141],"is_not":false,"summary":null,"term":"MONDO:0033282"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"fatal multiple mitochondrial dysfunctions syndrome","termid":"MONDO:0017338"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03701":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"multiple mitochondrial dysfunctions syndrome 5","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080274","Orphanet:569274","UMLS:C4539919","MEDGEN:1623132","GARD:22305","OMIM:617613"],"synonyms":[{"name":"MMDS5","type":"related"},{"name":"multiple mitochondrial dysfunctions syndrome 5","type":"exact"}],"termid":"MONDO:0033282","terms_by_termid":{"MONDO:0033282":null},"xrefs":{"Monarch":{"xref_id":"0033282"}}}


id: GO:1903324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of snoRNA metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:vw","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of RNA metabolic process","termid":"GO:0051253"},{"relation_name":"is_a","term_name":"regulation of snoRNA metabolic process","termid":"GO:1903323"},{"relation_name":"negatively_regulates","term_name":"sno(s)RNA metabolic process","termid":"GO:0016074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0016074"},{"rel_name":"regulates","termid":"GO:0016074"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0016074"],"is_obsolete":false,"name":"negative regulation of snoRNA metabolic process","synonyms":[{"name":"down regulation of snoRNA metabolic process","type":"exact"},{"name":"down regulation of snoRNA metabolism","type":"exact"},{"name":"down-regulation of snoRNA metabolic process","type":"exact"},{"name":"down-regulation of snoRNA metabolism","type":"exact"},{"name":"downregulation of snoRNA metabolic process","type":"exact"},{"name":"downregulation of snoRNA metabolism","type":"exact"},{"name":"inhibition of snoRNA metabolic process","type":"narrow"},{"name":"inhibition of snoRNA metabolism","type":"narrow"},{"name":"negative regulation of snoRNA metabolism","type":"exact"}],"termid":"GO:1903324"}


id: FYPO:0003480
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which one or more transfer RNA (tRNA) molecules contains no queuosine residues.","definition_xrefs":["PomBase:mah","PMID:24911101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased queuosine level in tRNA","termid":"FYPO:0003427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0003427"}],"interesting_parent_ids":["FYPO:0003427","FYPO:0001985"],"is_obsolete":false,"name":"queuosine absent from tRNA","termid":"FYPO:0003480"}


id: GO:1904977
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a lymphatic endothelial cell from one site to another in the wall of a lymphatic vessel.","definition_xrefs":["GOC:TermGenie","GO_REF:0000091","PMID:25745057"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelial cell migration","termid":"GO:0043542"},{"relation_name":"part_of","term_name":"lymph vessel morphogenesis","termid":"GO:0036303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lymphatic endothelial cell migration","termid":"GO:1904977"}


id: MONDO:0012551
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"alopecia, isolated","termid":"MONDO:0000005"},{"relation_name":"is_a","term_name":"alopecia totalis","termid":"MONDO:0019080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"alopecia areata 2","secondary_identifiers":["UMLS:C1853104","OMIM:610753","MEDGEN:343971","GARD:15496","MESH:C565186"],"synonyms":[{"name":"AA2","type":"exact"},{"name":"alopecia areata 2","type":"exact"}],"termid":"MONDO:0012551","xrefs":{"Monarch":{"xref_id":"0012551"}}}


id: MONDO:0025030
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Highly contagious infectious dermatitis with lesions near the interdigital spaces usually in cattle. It causes discomfort and often severe lameness (lameness, animal). Lesions can be either erosive or proliferative and wart-like with papillary growths and hypertrophied hairs. dichelobacter nodosus and treponema are the most commonly associated causative agents for this mixed bacterial infection disease.","definition_xrefs":["MESH:D058066"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cattle disease","termid":"MONDO:0024913"},{"relation_name":"is_a","term_name":"skin disease caused by bacterial infection, non-human animal","termid":"MONDO:0700109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"digital dermatitis in cattle","synonyms":[{"name":"Dermatitides, bovine digital","type":"related"},{"name":"Dermatitides, digital","type":"related"},{"name":"Ovine digital Dermatitides","type":"related"},{"name":"Ovine digital dermatitis","type":"related"},{"name":"Papillomatoses, digital","type":"related"},{"name":"Warts, bovine foot","type":"related"},{"name":"bovine digital Dermatitides","type":"related"},{"name":"bovine digital dermatitis","type":"related"},{"name":"bovine foot Warts","type":"related"},{"name":"bovine foot wart","type":"related"},{"name":"bovine hairy footwart","type":"related"},{"name":"bovine hairy footwarts","type":"related"},{"name":"dermatitis, bovine digital","type":"related"},{"name":"dermatitis, digital","type":"related"},{"name":"digital Dermatitides","type":"related"},{"name":"digital Dermatitides, Ovine","type":"related"},{"name":"digital Dermatitides, bovine","type":"related"},{"name":"digital Dermatitides, papillomatous","type":"related"},{"name":"digital Papillomatoses","type":"related"},{"name":"digital dermatitis, Ovine","type":"related"},{"name":"digital dermatitis, bovine","type":"related"},{"name":"digital dermatitis, papillomatous","type":"related"},{"name":"digital papillomatosis","type":"related"},{"name":"foot Warts, bovine","type":"related"},{"name":"foot wart, bovine","type":"related"},{"name":"footwart, bovine hairy","type":"related"},{"name":"footwarts, bovine hairy","type":"related"},{"name":"hairy footwart, bovine","type":"related"},{"name":"hairy footwarts, bovine","type":"related"},{"name":"papillomatosis, digital","type":"related"},{"name":"papillomatous digital Dermatitides","type":"related"},{"name":"papillomatous digital dermatitis","type":"related"},{"name":"wart, bovine foot","type":"related"}],"termid":"MONDO:0025030","xrefs":{"Monarch":{"xref_id":"0025030"}}}


id: PBO:0029759
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_DNA_5'-adenosine_monophosphate_hydrolase_activity","termid":"PBO:0029759"}


id: PBO:0080511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tryptophanyl tRNA synthetase 2 pseudogene 1","termid":"PBO:0080511"}


id: MONDO:1011964
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"idiopathic congenital chondrodystrophy, non-human animal","secondary_identifiers":["OMIA:001814"],"synonyms":[{"name":"congenital chondrodystrophy of unknown origin, non-human animal","type":"exact"}],"termid":"MONDO:1011964","xrefs":{"Monarch":{"xref_id":"1011964"}}}


id: GO:0045051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process of protein insertion into the endoplasmic reticulum (ER) membrane in which signal anchor sequences function as both ER signal sequences and membrane anchor sequences.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein insertion into ER membrane","termid":"GO:0045048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0051179"],"is_obsolete":false,"name":"protein insertion into ER membrane by internal uncleaved signal-anchor sequence","synonyms":[{"name":"internal uncleaved signal-anchor sequence mediated protein insertion into ER membrane","type":"exact"},{"name":"protein insertion into ER membrane, internal uncleaved signal-anchor sequence mediated","type":"exact"},{"name":"protein insertion into endoplasmic reticulum membrane by internal uncleaved signal-anchor sequence","type":"exact"},{"name":"protein-ER insertion by internal uncleaved signal-anchor sequence","type":"exact"},{"name":"protein-endoplasmic reticulum insertion by internal uncleaved signal-anchor sequence","type":"exact"}],"termid":"GO:0045051"}


id: PBO:0073675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal regulatory protein delta","termid":"PBO:0073675"}


id: MONDO:0002024
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cholera (obsolete MONDO:0002024)","termid":"MONDO:0002024","xrefs":{"Monarch":{"xref_id":"0002024"}}}


id: GO:0033513
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-lysine into other compounds, including acetyl-CoA, via the intermediate 5-aminopentanamide.","definition_xrefs":["GOC:mah","MetaCyc:PWY-5280"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-lysine catabolic process to acetyl-CoA","termid":"GO:0019474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086","GO:0006520","GO:0006790"],"is_obsolete":false,"name":"L-lysine catabolic process to acetyl-CoA via 5-aminopentanamide","synonyms":[{"name":"L-lysine breakdown to acetyl-CoA via 5-aminopentanamide","type":"exact"},{"name":"L-lysine degradation to acetyl-CoA via 5-aminopentanamide","type":"exact"}],"termid":"GO:0033513"}


id: GO:0070855
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the head/neck region of a myosin VI heavy chain.","definition_xrefs":["GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin head/neck binding","termid":"GO:0032028"},{"relation_name":"is_a","term_name":"myosin VI heavy chain binding","termid":"GO:0070854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008092"}],"interesting_parent_ids":["GO:0005515","GO:0008092","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"myosin VI head/neck binding","termid":"GO:0070855"}


id: PBO:0109624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GABA type A receptor associated protein like 3 (pseudogene)","termid":"PBO:0109624"}


id: PBO:0077170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tousled like kinase 2 pseudogene 1","termid":"PBO:0077170"}


id: GO:1903247
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of adrenergic receptor signaling pathway involved in positive regulation of heart rate.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:rl","GOC:TermGenie","GO_REF:0000058","GOC:BHF","PMID:17242280"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of adrenergic receptor signaling pathway involved in positive regulation of heart rate (obsolete GO:1903247)","synonyms":[{"name":"activation of Gs-coupled adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"narrow"},{"name":"activation of If activation by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"activation of activation of funny current by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"activation of adenylate cyclase-activating cardiac adrenergic receptor signaling pathway","type":"related"},{"name":"activation of adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"narrow"},{"name":"activation of adrenergic receptor signalling pathway involved in positive regulation of heart rate","type":"narrow"},{"name":"activation of beta adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"narrow"},{"name":"positive regulation of Gs-coupled adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"positive regulation of If activation by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"positive regulation of activation of funny current by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"positive regulation of adenylate cyclase-activating cardiac adrenergic receptor signaling pathway","type":"related"},{"name":"positive regulation of adrenergic receptor signalling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"positive regulation of beta adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"narrow"},{"name":"up regulation of Gs-coupled adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"up regulation of If activation by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"up regulation of activation of funny current by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"up regulation of adenylate cyclase-activating cardiac adrenergic receptor signaling pathway","type":"related"},{"name":"up regulation of adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"up regulation of adrenergic receptor signalling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"up regulation of beta adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"narrow"},{"name":"up-regulation of Gs-coupled adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"up-regulation of If activation by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"up-regulation of activation of funny current by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"up-regulation of adenylate cyclase-activating cardiac adrenergic receptor signaling pathway","type":"related"},{"name":"up-regulation of adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"up-regulation of adrenergic receptor signalling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"up-regulation of beta adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"narrow"},{"name":"upregulation of Gs-coupled adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"upregulation of If activation by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"upregulation of activation of funny current by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"upregulation of adenylate cyclase-activating cardiac adrenergic receptor signaling pathway","type":"related"},{"name":"upregulation of adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"upregulation of adrenergic receptor signalling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"upregulation of beta adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"narrow"}],"termid":"GO:1903247"}


id: GO:1990261
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of the unspliced pre-mRNA (pre-messenger RNA).","definition_xrefs":["PMID:22844259","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA catabolic process","termid":"GO:0006401"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pre-mRNA catabolic process","synonyms":[{"name":"pre-mRNA decay","type":"exact"},{"name":"unspliced RNA decay","type":"exact"}],"termid":"GO:1990261"}


id: GO:1901291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of double-strand break repair via single-strand annealing.","definition_xrefs":["GOC:sart","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of double-strand break repair","termid":"GO:2000780"},{"relation_name":"negatively_regulates","term_name":"double-strand break repair via single-strand annealing","termid":"GO:0045002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006281"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0006259","GO:0006281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of double-strand break repair via single-strand annealing","synonyms":[{"name":"down regulation of double-strand break repair via single-strand annealing","type":"exact"},{"name":"down-regulation of double-strand break repair via single-strand annealing","type":"exact"},{"name":"downregulation of double-strand break repair via single-strand annealing","type":"exact"},{"name":"inhibition of double-strand break repair via single-strand annealing","type":"narrow"}],"termid":"GO:1901291"}


id: GO:0030471
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The dynamics of the spindle pole body and microtubule cytoskeleton during the cell cycle. Includes spindle pole body duplication and separation and formation and elongation of the mitotic spindle. As in, but not restricted to, the fungi (Fungi, ncbi_taxonomy_id:4751).","definition_xrefs":["ISBN:0879693649"],"gene_count":0,"genotype_count":0,"name":"obsolete spindle pole body and microtubule cycle (sensu Fungi) (obsolete GO:0030471)","synonyms":[{"name":"spindle pole body and microtubule cycle (sensu Fungi)","type":"exact"},{"name":"spindle pole body and microtubule cycle (sensu Saccharomyces)","type":"narrow"}],"termid":"GO:0030471"}


id: MONDO:0021824
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A progressive muscle weakness and atrophy of the limbs that irregularly affects certain muscles, while it spares others.","definition_xrefs":["PMID:18299524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"progressive muscular atrophy","termid":"MONDO:0018687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"adult progressive spinal muscular atrophy, Aran Duchenne type","secondary_identifiers":["GARD:9132"],"synonyms":[{"name":"Aran Duchenne spinal muscular atrophy","type":"related"},{"name":"adult SMA Aran Duchenne type","type":"related"},{"name":"adult progressive spinal muscular atrophy Aran Duchenne type","type":"related"}],"termid":"MONDO:0021824","xrefs":{"Monarch":{"xref_id":"0021824"}}}


id: RO:0002404
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of upstream of","direct_ancestors":[{"relation_name":"is_a","term_name":"preceded_by","termid":"BFO:0000062"},{"relation_name":"is_a","term_name":"causally_downstream_of_or_within","termid":"RO:0002427"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causally_downstream_of","termid":"RO:0002404"}


id: PBO:0058524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6069","termid":"PBO:0058524"}


id: PATO:0001860
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A coordination which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"coordinated","termid":"PATO:0000769"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased coordination","synonyms":[{"name":"low coordination","type":"exact"}],"termid":"PATO:0001860"}


id: MONDO:0005168
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm arising from immature B and T cells","definition_xrefs":["EFO:0002425"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoid neoplasm","termid":"MONDO:0005157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"neoplasm of immature B and T cells","termid":"MONDO:0005168","xrefs":{"Monarch":{"xref_id":"0005168"}}}


id: MONDO:0019687
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete type 11 collagen-related bone disorder (obsolete MONDO:0019687)","termid":"MONDO:0019687","xrefs":{"Monarch":{"xref_id":"0019687"}}}


id: MONDO:0019860
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Thyroid hemiagenesis is a form of thyroid dysgenesis characterized by an absence of half of the thyroid gland that is usually asymptomatic but may result in primary congenital hypothyroidism, a permanent thyroid deficiency that is present from birth.","definition_xrefs":["Orphanet:95719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"generalized resistance to thyroid hormone","termid":"MONDO:0009043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"thyroid hemiagenesis","secondary_identifiers":["GARD:16844","SCTID:715734006","icd11.foundation:872920513","UMLS:C4023190","MEDGEN:868785"],"termid":"MONDO:0019860","xrefs":{"Monarch":{"xref_id":"0019860"}}}


id: PBO:0068222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 529","termid":"PBO:0068222"}


id: GO:0140138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which an organism effects a change that impairs the structure or function of an anatomical structure in another organism via the action of a venom. Venoms are injected into the prey by a bite or a sting.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disruption of anatomical structure in another organism","termid":"GO:0141060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"venom-mediated disruption of anatomical structure in another organism","termid":"GO:0140138"}


id: PBO:0064812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory inhibitor subunit 2 pseudogene 2","termid":"PBO:0064812"}


id: PBO:0083587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; YDR535C is not an essential gene","termid":"PBO:0083587"}


id: GO:1903493
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a clopidogrel stimulus. Clopidogrel is a is an oral, thienopyridine-class antiplatelet agent used to inhibit blood clots in coronary artery disease, peripheral vascular disease, and cerebrovascular disease.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:23392654"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to clopidogrel","termid":"GO:1903493"}


id: GO:0032495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a muramyl dipeptide stimulus. Muramyl dipeptide is derived from peptidoglycan.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to muramyl dipeptide","termid":"GO:0032495"}


id: MONDO:0010381
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tn polyagglutination syndrome","secondary_identifiers":["MEDGEN:82896","UMLS:C0272137","MESH:C562719","OMIM:300622","DOID:0080520"],"synonyms":[{"name":"TNPS","type":"related"},{"name":"Tn polyagglutination syndrome","type":"exact"},{"name":"Tn polyagglutination syndrome, somatic","type":"exact"},{"name":"galactosyltransferase deficiency","type":"related"}],"termid":"MONDO:0010381","xrefs":{"Monarch":{"xref_id":"0010381"}}}


id: PBO:0065519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentatricopeptide repeat domain 1","termid":"PBO:0065519"}


id: PBO:0058787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7156","termid":"PBO:0058787"}


id: MONDO:0004081
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of extrahepatic bile duct adenocarcinoma characterized by the presence of malignant glandular epithelium composed of clear cells.","definition_xrefs":["NCIT:C5775"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrahepatic bile duct adenocarcinoma","termid":"MONDO:0002665"},{"relation_name":"is_a","term_name":"clear cell adenocarcinoma","termid":"MONDO:0005004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992","MONDO:0002515"],"is_obsolete":false,"name":"extrahepatic bile duct clear cell adenocarcinoma","secondary_identifiers":["DOID:7032","MEDGEN:167829","UMLS:C0861855"],"synonyms":[{"name":"bile duct clear cell adenocarcinoma","type":"exact"},{"name":"bile duct clear cell carcinoma","type":"exact"},{"name":"clear cell adenocarcinoma of bile duct","type":"exact"},{"name":"clear cell adenocarcinoma of the bile duct","type":"exact"},{"name":"clear cell bile duct adenocarcinoma","type":"exact"},{"name":"extrahepatic bile duct clear cell adenocarcinoma","type":"exact"}],"termid":"MONDO:0004081","xrefs":{"Monarch":{"xref_id":"0004081"}}}


id: PBO:0005023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aurora-B kinase Ark1","termid":"PBO:0005023"}


id: GO:0016128
data:
  {"annotated_genes":["SJAG_02982","SJAG_04217","SJAG_00717","SJAG_03929","SJAG_03024","SJAG_04059","SJAG_04270","SJAG_03750","SJAG_00453","SJAG_04018","SJAG_01307","SJAG_03531","SJAG_02068","SJAG_02104","SJAG_04499","SJAG_02855","SJAG_00413","SJAG_01474","SJAG_00370","SJAG_03018","SJAG_03235","SJAG_04810","SJAG_02719","SJAG_04049","SJAG_02044","SJAG_03598","SJAG_04790","SJAG_00770","SJAG_03249","SJAG_00624","SJAG_03509","SJAG_00158","SJAG_03715"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[82051,72662,73279,74898,109681,75702,117093,81865,118406,78972,78244,96448,71591,77879,67130,82077,90290,73483,91476,76047,109367,111091,111933,78236],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006696"},{"annotations":[78051,82043,105177,105818,116935],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008204"},{"annotations":[95695],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0010895"},{"annotations":[111699],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0070452"},{"annotations":[107668,90379],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032443"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving phytosteroids, steroids of higher plants that differ from animal steroids in having substitutions at C24 and/or a double bond at C22. Phytosteroids are so named because they occur in higher plants; some, notably ergosterol, are also found in fungi.","definition_xrefs":["GOC:mah","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid metabolic process","termid":"GO:0008202"}],"gene_count":33,"genes_by_uniquename":{"SJAG_00158":null,"SJAG_00370":null,"SJAG_00413":null,"SJAG_00453":null,"SJAG_00624":null,"SJAG_00717":null,"SJAG_00770":null,"SJAG_01307":null,"SJAG_01474":null,"SJAG_02044":null,"SJAG_02068":null,"SJAG_02104":null,"SJAG_02719":null,"SJAG_02855":null,"SJAG_02982":null,"SJAG_03018":null,"SJAG_03024":null,"SJAG_03235":null,"SJAG_03249":null,"SJAG_03509":null,"SJAG_03531":null,"SJAG_03598":null,"SJAG_03715":null,"SJAG_03750":null,"SJAG_03929":null,"SJAG_04018":null,"SJAG_04049":null,"SJAG_04059":null,"SJAG_04217":null,"SJAG_04270":null,"SJAG_04499":null,"SJAG_04790":null,"SJAG_04810":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"phytosteroid metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"phytosteroid metabolism","type":"exact"}],"termid":"GO:0016128","terms_by_termid":{"GO:0006696":null,"GO:0008204":null,"GO:0010895":null,"GO:0032443":null,"GO:0070452":null}}


id: PBO:0086897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transporter; member of the sugar porter family; YFL040W is not an essential gene; may have a role in intracellular sterol transport","termid":"PBO:0086897"}


id: PBO:0056104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LY6/PLAUR domain containing 9, pseudogene","termid":"PBO:0056104"}


id: PBO:0086050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function reputedly involved in spore wall assembly","termid":"PBO:0086050"}


id: GO:0004909
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-1 to initiate a change in cell activity via signaling pathways and mediated by adaptor proteins.","definition_xrefs":["PMID:15062641","PMID:18613828"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interleukin-1 receptor activity","termid":"GO:0004908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"interleukin-1, type I, activating receptor activity","secondary_identifiers":["GO:0019967"],"synonyms":[{"name":"IL-1 type I, activating binding","type":"exact"},{"name":"IL-1 type I, activating receptor","type":"exact"},{"name":"interleukin-1 activating receptor activity","type":"exact"},{"name":"interleukin-1 type I receptor activity","type":"exact"},{"name":"interleukin-1, type I, activating binding","type":"related"}],"termid":"GO:0004909"}


id: MONDO:0009371
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"3 hydroxyisobutyric aciduria is characterized by ketoacidotic episodes, cerebral anomalies and facial dysmorphism. It is an organic aciduria that involves valine metabolism. Thirteen cases have been described in the literature so far. Transmission is thought to be autosomal recessive.","definition_xrefs":["Orphanet:939"],"direct_ancestors":[{"relation_name":"is_a","term_name":"classic organic aciduria","termid":"MONDO:0019215"},{"relation_name":"is_a","term_name":"inborn disorder of branched-chain amino acid metabolism","termid":"MONDO:0019242"},{"relation_name":"is_a","term_name":"valine metabolism disease","termid":"MONDO:0037870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"3-hydroxyisobutyric aciduria","secondary_identifiers":["icd11.foundation:1293648631","ICD9:791.9","MESH:C535312","OMIM:236795","SCTID:237957007","UMLS:C0342737","MEDGEN:90996","GARD:5662"],"synonyms":[{"name":"3-hydroxyisobutyric aciduria","type":"exact"},{"name":"disorder of valine metabolism","type":"related"}],"termid":"MONDO:0009371","xrefs":{"Monarch":{"xref_id":"0009371"}}}


id: GO:0033159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the vectorial transfer of a protein from the cytoplasm into the nucleus, across the nuclear membrane.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of protein import into nucleus, translocation (obsolete GO:0033159)","synonyms":[{"name":"negative regulation of protein import into cell nucleus, translocation","type":"exact"}],"termid":"GO:0033159"}


id: MONDO:0019324
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pemphigus foliaceous is a rare superficial pemphigus disease characterized by multiple, pruritic, scaly, crusted cutaneous erosions, with flaky circumscribed patches, localized mostly on the face, scalp, trunk and extremities, often presenting an erythematous base. Mucosal involvement is rarely observed.","definition_xrefs":["Orphanet:79481"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pemphigus","termid":"MONDO:0006594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093"],"is_obsolete":false,"name":"pemphigus foliaceus","secondary_identifiers":["GARD:7354","SCTID:35154004","HGNC:3050","MEDGEN:75513","UMLS:C0263313","NANDO:1200230","icd11.foundation:24246260","EFO:0008601","MedDRA:10057069","DOID:0080850"],"synonyms":[{"name":"PF","type":"related"}],"termid":"MONDO:0019324","xrefs":{"Monarch":{"xref_id":"0019324"}}}


id: PBO:0028763
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cytoplasmic_translation","termid":"PBO:0028763"}


id: PBO:0001511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human TMEM165 homolog","termid":"PBO:0001511"}


id: PBO:0044026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase 2 subunit alpha' interacting protein","termid":"PBO:0044026"}


id: GO:0089710
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a endocytic signal sequence, a specific peptide sequence, of 4-6 amino acids with an essential tyrosine (Y), found on cytoplasmic tails of some cell surface membrane proteins, which directs internalization by clathrin-coated pits.","definition_xrefs":["PMID:8918456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"endocytic targeting sequence binding","termid":"GO:0089710"}


id: MONDO:0004906
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hereditary fructose intolerance syndrome (obsolete MONDO:0004906)","termid":"MONDO:0004906","xrefs":{"Monarch":{"xref_id":"0004906"}}}


id: PBO:0091394
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small conserved C term region SMGDKMKGNMEKMAGKLTRDPELVQKGEDLKTG","termid":"PBO:0091394"}


id: PBO:0081252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 23","termid":"PBO:0081252"}


id: PBO:0088211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Small toxic protein; overexpression inhibits ergosterol biosynthesis; not required for normal growth, not conserved in related yeast species including S. paradoxus","termid":"PBO:0088211"}


id: PBO:0027191
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_misfolded_protein_degradation","termid":"PBO:0027191"}


id: SO:0000445
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Non-coding exon in the 5' UTR.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"noncoding_exon","termid":"SO:0000198"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_noncoding_exon","synonyms":[{"name":"5' nc exon","type":"exact"},{"name":"5' non coding exon","type":"exact"},{"name":"five prime noncoding exon","type":"exact"}],"termid":"SO:0000445"}


id: FYPO:0000664
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a specified catalytic activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"},{"relation_name":"is_a","term_name":"abolished molecular function","termid":"FYPO:0005446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000652","FYPO:0000654","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"abolished catalytic activity","synonyms":[{"name":"catalytic activity abolished","type":"exact"}],"termid":"FYPO:0000664"}


id: PBO:0054873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2287","termid":"PBO:0054873"}


id: PBO:0005242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pho85/PhoA-like cyclin-dependent kinase Pef1","termid":"PBO:0005242"}


id: PR:O13853
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- its3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13853"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol 4-phosphate 5-kinase its3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19G12.14","synonyms":[{"name":"1-phosphatidylinositol 4-phosphate kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PIP5K (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PtdIns(4)P-5-kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-its3","type":"exact"},{"name":"diphosphoinositide kinase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13853"}


id: SO:0001203
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region (DNA) to which RNA polymerase binds, to begin transcription.","definition_xrefs":["xenbase:jb"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0001203 RNA_polymerase_promoter (obsolete SO:0001203)","synonyms":[{"name":"RNA polymerase promoter","type":"exact"}],"termid":"SO:0001203"}


id: GO:0036167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A reversible switch of a cell from one phenotype to another that occurs upon infection of a host or host cell. For example, Candida albicans switches from a unicellular form to an invasive multicellular filamentous form upon infection of host tissue. Phenotypic switching begins with changes in cell morphology and altered gene expression patterns and ends when the morphology of a population of cells has reverted back to the default state, accompanied by altered expression patterns.","definition_xrefs":["GOC:di","PMID:16696644","Wikipedia:Phenotypic_switching"],"gene_count":0,"genotype_count":0,"name":"obsolete phenotypic switching in response to host (obsolete GO:0036167)","termid":"GO:0036167"}


id: GO:0031837
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a substance K receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurokinin receptor binding","termid":"GO:0031834"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"substance K receptor binding","synonyms":[{"name":"neurokinin-A receptor binding","type":"exact"},{"name":"substance K receptor ligand","type":"narrow"}],"termid":"GO:0031837"}


id: PBO:0040314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase F1 subunit alpha pseudogene 8","termid":"PBO:0040314"}


id: PBO:0027133
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_telomere-nuclear_envelope_distance_during_mitotic_G2_phase","termid":"PBO:0027133"}


id: PBO:0049208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate ionotropic receptor NMDA type subunit 2B","termid":"PBO:0049208"}


id: GO:0072289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a metanephric nephron tubule from unspecified parts. A metanephric nephron tubule is an epithelial tube that is part of a nephron in the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule formation","termid":"GO:0072079"},{"relation_name":"is_a","term_name":"metanephric tubule formation","termid":"GO:0072174"},{"relation_name":"part_of","term_name":"metanephric nephron tubule morphogenesis","termid":"GO:0072282"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric nephron tubule formation","termid":"GO:0072289"}


id: _global:results_in_movement_of
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"Holds between p and c when p is locomotion process and the outcome of this process is the change of location of c","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"results_in_changes_to_anatomical_or_cellular_structure","termid":"_global:results_in_changes_to_anatomical_or_cellular_structure"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_movement_of","secondary_identifiers":["GOREL:0001001","RO:0002565"],"termid":"_global:results_in_movement_of"}


id: PBO:0083732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential beta-coat protein of the COPI coatomer; involved in ER-to-Golgi protein trafficking and maintenance of normal ER morphology; shares 43% sequence identity with mammalian beta-coat protein (beta-COP)","termid":"PBO:0083732"}


id: PBO:0083298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps 3' end of essential PRP21 gene encoding a subunit of the SF3a splicing factor complex","termid":"PBO:0083298"}


id: GO:0002437
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An inflammatory response to an antigenic stimulus, which can be include any number of T cell or B cell epitopes.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory response","termid":"GO:0006954"},{"relation_name":"is_a","term_name":"immune response","termid":"GO:0006955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inflammatory response to antigenic stimulus","termid":"GO:0002437"}


id: PBO:0028848
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_stability_during_cellular_response_to_UV","termid":"PBO:0028848"}


id: GO:0102663
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: gibberellin A34 + 2-oxoglutarate + O2 = H+ + gibberellin A34-catabolite + succinate + carbon dioxide + H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete gibberellin A34,2-oxoglutarate:oxygen oxidoreductase activity (obsolete GO:0102663)","termid":"GO:0102663"}


id: PBO:0086022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; the authentic protein is detected in highly purified mitochondria in high-throughput studies; null mutant displays reduced frequency of mitochondrial genome loss","termid":"PBO:0086022"}


id: PR:Q9P7X8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase I subunit RPA2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03090","PANTHER:PTHR20856:SF5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I subunit RPA2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP23A10.07","secondary_identifiers":["UniProtKB:Q9P7X8"],"synonyms":[{"name":"DNA-directed RNA polymerase I polypeptide 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase I subunit 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-POLR1B","type":"exact"}],"termid":"PR:Q9P7X8"}


id: PBO:0030616
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_cilofungin","termid":"PBO:0030616"}


id: PBO:0049678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HADHA pseudogene 2","termid":"PBO:0049678"}


id: GO:0072340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lactams, any cyclic amides of amino carboxylic acids, having a 1-azacycloalkan-2-one structure, or analogues having unsaturation or heteroatoms replacing one or more carbon atoms of the ring.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"lactam metabolic process","termid":"GO:0072338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"lactam catabolic process","synonyms":[{"name":"cellular lactam breakdown","type":"exact"},{"name":"cellular lactam catabolic process","type":"exact"},{"name":"cellular lactam catabolism","type":"exact"},{"name":"cellular lactam degradation","type":"exact"}],"termid":"GO:0072340"}


id: GO:0036025
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex that contains protein C inhibitor (SERPINA5) and transmembrane protease serine 11E (TMPRSS11E); formation of the complex inhibits the serine protease activity of transmembrane protease serine 11E.","definition_xrefs":["PMID:15328353","GOC:ans"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine protease inhibitor complex","termid":"GO:0097180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"protein C inhibitor-TMPRSS11E complex","synonyms":[{"name":"PCI-TMPRSS11E complex","type":"exact"},{"name":"SERPINA5-TMPRSS11E complex","type":"exact"},{"name":"plasma serine protease inhibitor-TMPRSS11E complex","type":"exact"},{"name":"protein C inhibitor-transmembrane protease serine 11E complex","type":"exact"},{"name":"serpin A5-TMPRSS11E complex","type":"exact"}],"termid":"GO:0036025"}


id: GO:1900683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of fumonisin biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ketone metabolic process","termid":"GO:0010565"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"fumonisin biosynthetic process","termid":"GO:1900541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of fumonisin biosynthetic process","synonyms":[{"name":"regulation of fumonisin anabolism","type":"exact"},{"name":"regulation of fumonisin biosynthesis","type":"exact"},{"name":"regulation of fumonisin formation","type":"exact"},{"name":"regulation of fumonisin synthesis","type":"exact"}],"termid":"GO:1900683"}


id: PBO:0046860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fas associated factor family member 2 pseudogene 1","termid":"PBO:0046860"}


id: FYPO:0007462
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of filamentous actin measured the cell is higher than normal when the cell is in the vegetative growth phase of the life cycle. The total actin level (globular and filamentous actin) may be normal or abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"increased filamentous actin level","synonyms":[{"name":"increased F-actin level","type":"exact"},{"name":"increased accumulation of filamentous actin in cell","type":"related"},{"name":"increased cellular F-actin level","type":"exact"},{"name":"increased cellular filamentous actin level","type":"exact"},{"name":"increased filamentous actin level during mitotic cell cycle","type":"related"},{"name":"increased filamentous actin level during vegetative growth","type":"exact"}],"termid":"FYPO:0007462"}


id: PBO:0000670
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Der1-like (degradation in the ER) family (predicted)","termid":"PBO:0000670"}


id: MONDO:1012982
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Heart disorder that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiovascular disorder, non-human animal","termid":"MONDO:1011306"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heart disorder, non-human animal","termid":"MONDO:1012982","xrefs":{"Monarch":{"xref_id":"1012982"}}}


id: PBO:0061192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuromedin U receptor 2","termid":"PBO:0061192"}


id: GO:0004740
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id: MONDO:0035237
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare subtype of pyoderma gangrenosum disease characterized by grouped vesicles that rapidly spread and coalesce to form large bullae, which evolve into ulcerations that have an erythematous peripheral halo and central necrosis, mainly affecting the upper limbs and face. Lymphoproliferative diseases are frequently associated, thus prognosis is often compromised.","definition_xrefs":["Orphanet:538869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyoderma gangrenosum","termid":"MONDO:0018824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"bullous pyoderma gangrenosum","secondary_identifiers":["GARD:22222","MEDGEN:590609","ICD10CM:L88","UMLS:C0406687"],"synonyms":[{"name":"Phemphigoid pyoderma gangrenosum","type":"exact"}],"termid":"MONDO:0035237","xrefs":{"Monarch":{"xref_id":"0035237"}}}


id: PBO:0029914
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_GGPP_level","termid":"PBO:0029914"}


id: PATO:0002288
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  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An elasticity which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"elastic","termid":"PATO:0001171"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased elasticity","termid":"PATO:0002288"}


id: GO:0050479
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-alkyl-sn-glycerol + O2 + (tetrahydrobiopterin/tetrahydropteridine) = 1-hydroxyalkyl-sn-glycerol + H2O + (dihydrobiopterin/dihydropteridine).","definition_xrefs":["MetaCyc:GLYCERYL-ETHER-MONOOXYGENASE-RXN","EC:1.14.16.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced pteridine as one donor, and incorporation of one atom of oxygen","termid":"GO:0016714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glyceryl-ether monooxygenase activity","secondary_identifiers":["Reactome:R-HSA-5696119","RHEA:36255"],"synonyms":[{"name":"1-alkyl-sn-glycerol,tetrahydrobiopterin:oxygen oxidoreductase activity","type":"related"},{"name":"O-alkylglycerol monooxygenase activity","type":"related"},{"name":"alkylglycerol monooxygenase activity","type":"related"},{"name":"glyceryl ether oxygenase activity","type":"related"},{"name":"glyceryl etherase activity","type":"related"},{"name":"glyceryl-ether cleaving enzyme activity","type":"related"}],"termid":"GO:0050479"}


id: PBO:0090130
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-FYVE type zinc finger protein and glutamine sensor Pib2","termid":"PBO:0090130"}


id: PBO:0050290
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatocyte nuclear factor 4 alpha","termid":"PBO:0050290"}


id: GO:0090259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of retinal ganglion cell axon guidance, the process in which the migration of an axon growth cone of a retinal ganglion cell (RGC) is directed to its target in the brain in response to a combination of attractive and repulsive cues.","definition_xrefs":["GOC:tb","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of axon guidance","termid":"GO:1902667"},{"relation_name":"regulates","term_name":"retinal ganglion cell axon guidance","termid":"GO:0031290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of retinal ganglion cell axon guidance","termid":"GO:0090259"}


id: GO:0048878
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id: MOD:01337
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  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to L-aspartate 4-methyl ester.","definition_xrefs":["Unimod:528#N"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-aspartic acid 4-methyl ester","termid":"MOD:01181"},{"relation_name":"is_a","term_name":"deamidated and methyl esterified residue","termid":"MOD:01369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"deamidated 4-methyl esterified asparagine","synonyms":[{"name":"Deamidation followed by a methylation","type":"related"},{"name":"Methyl+Deamidated","type":"related"}],"termid":"MOD:01337"}


id: PBO:0055344
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2772","termid":"PBO:0055344"}


id: MONDO:0000965
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare benign adipose tissue neoplasm of the liver.","definition_xrefs":["NCIT:C5750"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign endocrine neoplasm","termid":"MONDO:0000627"},{"relation_name":"is_a","term_name":"lipoma","termid":"MONDO:0005106"},{"relation_name":"is_a","term_name":"liver and intrahepatic bile duct neoplasm","termid":"MONDO:0024477"},{"relation_name":"is_a","term_name":"hepatobiliary benign neoplasm","termid":"MONDO:0859689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"liver lipoma","secondary_identifiers":["UMLS:C1333970","MEDGEN:232277","DOID:10190"],"synonyms":[{"name":"hepatic lipoma","type":"exact"},{"name":"lipoma of liver","type":"exact"},{"name":"lipoma of the liver","type":"exact"},{"name":"liver lipoma","type":"exact"}],"termid":"MONDO:0000965","xrefs":{"Monarch":{"xref_id":"0000965"}}}


id: PBO:0087469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of a TORC1-stimulating GTPase and the EGO/GSE complex; subunit of Gtr1-Gtr2, a GTPase that activates TORC1 in response to amino acid stimulation; subunit of EGO/GSE, a vacuolar/endosomal membrane complex that regulates exit from rapamycin-induced growth arrest and sorting of Gap1p from the endosome to the plasma membrane; involved in phosphate transport and telomeric chromatin silencing; activated by the the Iml1p (GAP) subunit of the SEACIT complex; similar to human RagA and RagB","termid":"PBO:0087469"}


id: PBO:0004687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA processing factor (predicted)","termid":"PBO:0004687"}


id: MONDO:0006822
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Klatskin's tumor (obsolete MONDO:0006822)","termid":"MONDO:0006822","xrefs":{"Monarch":{"xref_id":"0006822"}}}


id: PBO:0041318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 69 pseudogene 4","termid":"PBO:0041318"}


id: PBO:0000967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase P and RNase MRP subunit p30 (predicted)","termid":"PBO:0000967"}


id: PBO:0043291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain containing 10A","termid":"PBO:0043291"}


id: GO:0141200
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UTP + thiamine = UMP + thiamine diphosphate.","definition_xrefs":["PMID:38547260","RHEA:79423"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diphosphotransferase activity","termid":"GO:0016778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"UTP thiamine diphosphokinase activity","termid":"GO:0141200"}


id: PBO:0041155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic transcription factor 3 pseudogene 10","termid":"PBO:0041155"}


id: GO:0020036
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A disk-like structure that appears at the periphery of a red blood cell infected by an apicomplexan parasite, characterized by a translucent lumen and an electron-dense coat of variable thickness; often appears to be tethered to the host cell membrane by fibrous connections with the erythrocyte cytoskeleton.","definition_xrefs":["PMID:16705161"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell cytoplasm part","termid":"GO:0033655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"Maurer's cleft","synonyms":[{"name":"Maurers cleft","type":"exact"}],"termid":"GO:0020036"}


id: PR:O13690
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- syt22 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13690"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PH and SEC7 domain-containing protein C11E3.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11E3.11c","synonyms":[{"name":"Spom972h-syt22","type":"exact"}],"termid":"PR:O13690"}


id: PBO:0055986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat transmembrane neuronal 4","termid":"PBO:0055986"}


id: PBO:0065839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB9A, member RAS oncogene family pseudogene 4","termid":"PBO:0065839"}


id: PBO:0001648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snoR02 (predicted)","termid":"PBO:0001648"}


id: GO:0046432
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA, a derivative of coenzyme A.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"2'-(5''-triphosphoribosyl)-3'-dephospho-CoA metabolic process","synonyms":[{"name":"2'-(5''-triphosphoribosyl)-3'-dephospho-CoA metabolism","type":"exact"}],"termid":"GO:0046432"}


id: PBO:0017608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyoxalase II","termid":"PBO:0017608"}


id: PBO:0056465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated serine/threonine kinase 3","termid":"PBO:0056465"}


id: GO:1905703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of inhibitory synapse assembly.","definition_xrefs":["GO_REF:0000058","PMID:27779093","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of synapse assembly","termid":"GO:0051964"},{"relation_name":"is_a","term_name":"regulation of inhibitory synapse assembly","termid":"GO:1905702"},{"relation_name":"negatively_regulates","term_name":"inhibitory synapse assembly","termid":"GO:1904862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"negative regulation of inhibitory synapse assembly","synonyms":[{"name":"down regulation of inhibitory synapse assembly","type":"exact"},{"name":"down regulation of inhibitory synapse formation","type":"exact"},{"name":"down-regulation of inhibitory synapse assembly","type":"exact"},{"name":"down-regulation of inhibitory synapse formation","type":"exact"},{"name":"downregulation of inhibitory synapse assembly","type":"exact"},{"name":"downregulation of inhibitory synapse formation","type":"exact"},{"name":"inhibition of inhibitory synapse assembly","type":"narrow"},{"name":"inhibition of inhibitory synapse formation","type":"narrow"},{"name":"negative regulation of inhibitory synapse formation","type":"exact"}],"termid":"GO:1905703"}


id: GO:0140404
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process mediated by a molecule secreted by a symbiont that results in the modulation (either activation or suppression) of a host innate immune response. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:21467214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host innate immune response","termid":"GO:0052167"},{"relation_name":"is_a","term_name":"effector-mediated perturbation of host defenses by symbiont","termid":"GO:0140415"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"effector-mediated perturbation of host innate immune response by symbiont","synonyms":[{"name":"effector mediated modulation of host immune response by symbiont","type":"exact"},{"name":"effector triggered modulation of host immune response by symbiont","type":"exact"},{"name":"effector-dependent modulation of host immune response by symbiont","type":"exact"},{"name":"effector-mediated modulation of host immunity","type":"exact"},{"name":"effector-mediated modulation of host innate immune response by symbiont","type":"exact"},{"name":"effector-triggered modulation of host immune response by symbiont","type":"exact"}],"termid":"GO:0140404"}


id: MONDO:0017927
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Severe lateral tibial bowing with short stature is a rare, genetic, primary bent bone dysplasia characterized by significant, uni-/bilateral, lateral tibial bowing localized to the distal two-thirds of the tibia, with respective cortical thickening and thinning of the inner and outer tibial curve, loss of normal trabecular bone, bilateral abnormalities of the tibial epiphyses and growth plates, as well as foot abnormalities, including abnormally high arches. Affected individuals have short stature with absence of other skeletal abnormalities.","definition_xrefs":["Orphanet:324307"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bent bone dysplasia","termid":"MONDO:0019698"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"severe lateral tibial bowing with short stature","secondary_identifiers":["UMLS:C4707850","GARD:21436","SCTID:766819001","MEDGEN:1634340"],"termid":"MONDO:0017927","xrefs":{"Monarch":{"xref_id":"0017927"}}}


id: FYPO:0002776
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of sumoylated protein measured in a cell is normal (i.e. indistinguishable from wild type). Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein level during vegetative growth","termid":"FYPO:0000833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal level of sumoylated protein in cell","synonyms":[{"name":"normal level of sumoylated protein during vegetative growth","type":"exact"},{"name":"normal level of sumoylated protein in cell during mitotic cell cycle","type":"related"},{"name":"normal sumoylated protein accumulation","type":"related"},{"name":"normal sumoylated protein level","type":"exact"}],"termid":"FYPO:0002776"}


id: GO:1990599
data:
  {"annotated_genes":["SJAG_02556"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[120650],"is_not":false,"summary":null,"term":"GO:1990599"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of ester linkages within 3' overhang single-stranded deoxyribonucleic acid by creating internal breaks.","definition_xrefs":["PMID:25203555"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single-stranded DNA endodeoxyribonuclease activity","termid":"GO:0000014"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02556":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0140097","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"3' overhang single-stranded DNA endodeoxyribonuclease activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990599","terms_by_termid":{"GO:1990599":null}}


id: GO:0046170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of methanol, CH3-OH, a colorless, flammable, mobile, poisonous liquid, widely used as a solvent.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methanol metabolic process","termid":"GO:0015945"},{"relation_name":"is_a","term_name":"primary alcohol catabolic process","termid":"GO:0034310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"methanol catabolic process","synonyms":[{"name":"methanol breakdown","type":"exact"},{"name":"methanol catabolism","type":"exact"},{"name":"methanol degradation","type":"exact"}],"termid":"GO:0046170"}


id: SO:0001089
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region where a transformation occurs in a protein after it has been synthesized. This which may regulate, stabilize, crosslink or introduce new chemical functionalities in the protein.","definition_xrefs":["EBIBS:GAR","UniProt:curation_manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biochemical_region_of_peptide","termid":"SO:0100001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"post_translationally_modified_region","secondary_identifiers":["http://en.wikipedia.org/wiki/Post_translational_modification","BS:00052"],"synonyms":[{"name":"mod_res","type":"exact"},{"name":"modified residue","type":"exact"},{"name":"post_translational_modification","type":"exact"}],"termid":"SO:0001089"}


id: GO:1901299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hydrogen peroxide-mediated programmed cell death.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of programmed cell death","termid":"GO:0043069"},{"relation_name":"is_a","term_name":"regulation of hydrogen peroxide-mediated programmed cell death","termid":"GO:1901298"},{"relation_name":"negatively_regulates","term_name":"hydrogen peroxide-mediated programmed cell death","termid":"GO:0010421"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hydrogen peroxide-mediated programmed cell death","synonyms":[{"name":"down regulation of hydrogen peroxide-mediated programmed cell death","type":"exact"},{"name":"down-regulation of hydrogen peroxide-mediated programmed cell death","type":"exact"},{"name":"downregulation of hydrogen peroxide-mediated programmed cell death","type":"exact"},{"name":"inhibition of hydrogen peroxide-mediated programmed cell death","type":"narrow"}],"termid":"GO:1901299"}


id: PBO:0014590
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rrm-containing protein, isolated from a synthetic lethal Mutant with Nab2","termid":"PBO:0014590"}


id: MONDO:0006740
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Empty sella syndrome (ESS) is a condition that involves the sella turcica, a bony structure at the base of the brain that protects the pituitary gland. There is a primary and secondary form of the condition. The primary form occurs when a structural defect above the pituitary gland increases pressure in the sella turcica and causes the gland to flatten. The secondary form occurs when the pituitary gland is damaged due to injury, a tumor, surgery or radiation therapy. Some people with ESS have no symptoms. People with secondary ESS may have symptoms of decreased pituitary function such as absence of menstruation, infertility, fatigue, and intolerance to stress and infection. In children, ESS may be associated with early onset of puberty, growth hormone deficiency, pituitary tumors, or pituitary gland dysfunction. Treatment focuses on the symptoms present in each person.","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"pituitary gland disorder","termid":"MONDO:0003381"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"empty sella syndrome","secondary_identifiers":["DOID:3642","MEDGEN:41766","UMLS:C0014008","EFO:1000914","NCIT:C84686","icd11.foundation:49112094","MESH:D004652","ICD9:253.8","MedDRA:10014567","SCTID:237722004"],"synonyms":[{"name":"empty sella","type":"exact"},{"name":"empty sella syndrome","type":"exact"},{"name":"empty sella turcica","type":"related"}],"termid":"MONDO:0006740","xrefs":{"Monarch":{"xref_id":"0006740"}}}


id: MONDO:0004271
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tubular type adenoma of the breast in which, during pregnancy and lactation, the epithelial cells show extensive secretory changes.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast adenoma","termid":"MONDO:0002058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pregnancy adenoma","secondary_identifiers":["ICDO:8204/0","MEDGEN:226830","UMLS:C1266023","DOID:7539","NCIT:C9473"],"synonyms":[{"name":"Lactating adenoma","type":"exact"},{"name":"Lactating adenoma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0004271","xrefs":{"Monarch":{"xref_id":"0004271"}}}


id: PBO:0044900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"derlin 2","termid":"PBO:0044900"}


id: PBO:0054697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2106","termid":"PBO:0054697"}


id: PBO:0004770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor complex subunit Ctf1","termid":"PBO:0004770"}


id: PBO:0060092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 39","termid":"PBO:0060092"}


id: FYPO:0006743
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is decreased during a cellular response to osmotic stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to nucleus during vegetative growth","termid":"FYPO:0001514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to nucleus during cellular response to osmotic stress","synonyms":[{"name":"decreased protein localisation to nucleus during cellular response to osmotic stress","type":"exact"},{"name":"decreased protein localization to nucleus during cellular response to osmotic stress during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to nucleus during cellular response to osmotic stress during vegetative growth","type":"exact"},{"name":"decreased protein localization to nucleus during osmotic stress","type":"exact"},{"name":"reduced protein localization to nucleus during cellular response to osmotic stress","type":"exact"}],"termid":"FYPO:0006743"}


id: PBO:0068120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 427","termid":"PBO:0068120"}


id: PBO:0061392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 52","termid":"PBO:0061392"}


id: MONDO:0006204
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete extramammary Paget disease (obsolete MONDO:0006204)","termid":"MONDO:0006204","xrefs":{"Monarch":{"xref_id":"0006204"}}}


id: MONDO:0002629
data:
  {"annotated_genes":["SJAG_04287"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87953],"is_not":false,"summary":null,"term":"MONDO:0002629"}]},"cv_name":"mondo","definition":"A usually aggressive malignant bone-forming mesenchymal neoplasm arising from the bone. It may arise de novo or from a pre-existing lesion of the bone. Pain and a palpable mass are the most frequent clinical sign and symptom. It may spread to other anatomic sites, particularly the lungs.","definition_xrefs":["NCIT:C53707"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteosarcoma","termid":"MONDO:0009807"},{"relation_name":"is_a","term_name":"bone sarcoma","termid":"MONDO:0021054"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04287":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"bone osteosarcoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:108437","SCTID:307576001","GARD:7284","Orphanet:668","MedDRA:10031291","DOID:3376","OMIM:259500","ICD9:170.9","UMLS:C0585442"],"synonyms":[{"name":"bone osteosarcoma","type":"exact"},{"name":"osteosarcoma of bone","type":"exact"},{"name":"osteosarcoma, somatic","type":"exact"},{"name":"osteosarcoma, somatic mutation","type":"exact"},{"name":"primary osteosarcoma of bone","type":"exact"}],"termid":"MONDO:0002629","terms_by_termid":{"MONDO:0002629":null},"xrefs":{"Monarch":{"xref_id":"0002629"}}}


id: MONDO:0004281
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An eccrine porocarcinoma that arises from the sweat glands in the vulva.","definition_xrefs":["NCIT:C40306"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vulvar eccrine adenocarcinoma","termid":"MONDO:0003861"},{"relation_name":"is_a","term_name":"eccrine porocarcinoma","termid":"MONDO:0006189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"vulvar eccrine porocarcinoma","secondary_identifiers":["MEDGEN:275616","DOID:7565","UMLS:C1520081"],"synonyms":[{"name":"eccrine porocarcinoma of mammalian vulva","type":"exact"},{"name":"mammalian vulva eccrine porocarcinoma","type":"exact"},{"name":"vulvar eccrine porocarcinoma","type":"exact"}],"termid":"MONDO:0004281","xrefs":{"Monarch":{"xref_id":"0004281"}}}


id: PR:Q9URX4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gto1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9URX4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized family 31 glucosidase C1039.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1039.11c","synonyms":[{"name":"Spom972h-gto1","type":"exact"}],"termid":"PR:Q9URX4"}


id: GO:0004415
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the random hydrolysis of (1->4) linkages between N-acetyl-beta-D-glucosamine and D-glucuronate residues in hyaluronate.","definition_xrefs":["EC:3.2.1.35"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosaminidase activity","termid":"GO:0015929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016798","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"hyalurononglucosaminidase activity","secondary_identifiers":["Reactome:R-HSA-2160874","Reactome:R-HSA-2160892","Reactome:R-HSA-5693356","Reactome:R-HSA-9036077","Reactome:R-HSA-2318585","MetaCyc:3.2.1.35-RXN","Reactome:R-HSA-1793209"],"synonyms":[{"name":"chondroitinase I activity","type":"related"},{"name":"chondroitinase activity","type":"broad"},{"name":"hyaluronate 4-glycanohydrolase activity","type":"related"},{"name":"hyaluronidase activity","type":"broad"},{"name":"hyaluronoglucosaminidase activity","type":"exact"},{"name":"hyaluronoglucosidase activity","type":"related"}],"termid":"GO:0004415"}


id: FYPO:0007488
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the Golgi apparatus is decreased, and the protein is present in the vacuole instead.","definition_xrefs":["PMID:32918581","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to Golgi apparatus","termid":"FYPO:0004786"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to Golgi apparatus, with protein mislocalized to vacuole","synonyms":[{"name":"decreased protein localisation to Golgi apparatus, with protein mislocalised to vacuole","type":"exact"},{"name":"decreased protein localization to Golgi apparatus, with protein mislocalized to vacuole during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to Golgi apparatus, with protein mislocalized to vacuole during vegetative growth","type":"exact"},{"name":"reduced protein localization to Golgi apparatus, with protein mislocalized to vacuole","type":"exact"}],"termid":"FYPO:0007488"}


id: PBO:0074137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member A2","termid":"PBO:0074137"}


id: GO:0120541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification, often by sulfation, of sugars in the polysaccharide chain component of dermatan sulfate proteoglycans.","definition_xrefs":["PMID:38500384"],"gene_count":0,"genotype_count":0,"name":"obsolete dermatan sulfate proteoglycan biosynthetic process, enzymatic modification (obsolete GO:0120541)","termid":"GO:0120541"}


id: GO:0102594
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cyanidin 3,7-di-O-beta-D-glucoside betaine + 1-O-4-hydroxybenzoyl-beta-D-glucose = cyanidin 3-O-glucoside-7-O-(6-O-(p-hydroxybenzoyl)-glucoside) + beta-D-glucose.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete cyanidin 7-O-glucoside acyltransferase(acyl-glucose dependent) activity (obsolete GO:0102594)","termid":"GO:0102594"}


id: PBO:0090024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recombination mediator Swi5","termid":"PBO:0090024"}


id: PATO:0000620
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A malformed quality inhering in a bearer by virtue of the bearer's gross morphology containing only what are normally dorsal structures.","definition_xrefs":["PATOC:melissa"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malformed","termid":"PATO:0000646"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dorsalized","termid":"PATO:0000620"}


id: MONDO:0009511
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Larsen-like syndrome, B3GAT3 type is a rare, genetic, primary bone dysplasia characterized by laxity, dislocations and contractures of the joints, short stature, foot deformities (e.g. clubfeet), broad tips of fingers and toes, short neck, dysmorphic facial features (hypertelorism, downslanting palpebral fissures, upturned nose with anteverted nares, high arched palate) and various cardiac malformations. Severe disease is associated with multiple fractures, osteopenia, arachnodactyly and blue sclerae. A broad spectrum of additional features, including scoliosis, radio-ulnar synostosis, mild developmental delay, and various eye disorders (glaucoma, amblyopia, hyperopia, astigmatism, ptosis), are also reported.","definition_xrefs":["Orphanet:284139"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with multiple joint dislocations (obsolete MONDO:0019700)","termid":"MONDO:0019700"},{"relation_name":"is_a","term_name":"congenital disorder of glycosylation","termid":"MONDO:0015286"},{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"Larsen-like syndrome, B3GAT3 type","secondary_identifiers":["MEDGEN:480034","GARD:17308","OMIM:245600","MESH:C537874","UMLS:C3278404","DOID:0080575"],"synonyms":[{"name":"JDSCD","type":"related"},{"name":"Larsen syndrome, autosomal recessive","type":"related"},{"name":"Larsen syndrome, autosomal recessive, formerly","type":"related"},{"name":"multiple JOINT dislocations, short stature, and craniofacial dysmorphism with or without congenital heart defects","type":"related"},{"name":"multiple JOINT dislocations, short stature, craniofacial dysmorphism, and congenital heart defects","type":"related"},{"name":"multiple Joint dislocations, short stature, and craniofacial Dysmorphism with or without congenital heart defects","type":"related"},{"name":"multiple joint dislocations, short stature, craniofacial dysmorphism, with or without congenital heart defects","type":"exact"},{"name":"multiple joint dislocations-short stature-craniofacial dysmorphism-congenital heart defects syndrome","type":"exact"}],"termid":"MONDO:0009511","xrefs":{"Monarch":{"xref_id":"0009511"}}}


id: GO:0072659
data:
  {"annotated_genes":["SJAG_03756","SJAG_00916","SJAG_00858","SJAG_03838","SJAG_02583","SJAG_02912","SJAG_03453","SJAG_00379","SJAG_02282","SJAG_00144","SJAG_01516","SJAG_01114","SJAG_04597","SJAG_02392","SJAG_03970","SJAG_04565","SJAG_04609","SJAG_03029","SJAG_04434","SJAG_03915","SJAG_04158","SJAG_04923","SJAG_03810","SJAG_01809","SJAG_04930","SJAG_00330"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[66755,69857,91346,92364,92662,97533,103224,116816],"is_not":false,"summary":null,"term":"GO:0072659"},{"annotations":[93105,102949,61966,67803,120767,114862,96714,114645],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099638"},{"annotations":[96967,114864,111428,79334,71926,108248,108877,110639],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043001"},{"annotations":[89903],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0042997"},{"annotations":[96222],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0140325"},{"annotations":[97671],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1903077"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a specific location in the plasma membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to membrane","termid":"GO:0072657"},{"relation_name":"is_a","term_name":"protein localization to cell periphery","termid":"GO:1990778"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00144":null,"SJAG_00330":null,"SJAG_00379":null,"SJAG_00858":null,"SJAG_00916":null,"SJAG_01114":null,"SJAG_01516":null,"SJAG_01809":null,"SJAG_02282":null,"SJAG_02392":null,"SJAG_02583":null,"SJAG_02912":null,"SJAG_03029":null,"SJAG_03453":null,"SJAG_03756":null,"SJAG_03810":null,"SJAG_03838":null,"SJAG_03915":null,"SJAG_03970":null,"SJAG_04158":null,"SJAG_04434":null,"SJAG_04565":null,"SJAG_04597":null,"SJAG_04609":null,"SJAG_04923":null,"SJAG_04930":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to plasma membrane","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0090002","GO:0072661"],"synonyms":[{"name":"protein localisation in plasma membrane","type":"related"},{"name":"protein localization in plasma membrane","type":"related"},{"name":"protein targeting to plasma membrane","type":"related"},{"name":"protein-plasma membrane targeting","type":"related"}],"termid":"GO:0072659","terms_by_termid":{"GO:0042997":null,"GO:0043001":null,"GO:0072659":null,"GO:0099638":null,"GO:0140325":null,"GO:1903077":null}}


id: MONDO:0001236
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm involving the appendix.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cecal neoplasm","termid":"MONDO:0005694"},{"relation_name":"is_a","term_name":"disorder of appendix","termid":"MONDO:0056798"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"appendiceal neoplasm","secondary_identifiers":["MESH:D001063","NCIT:C4434","EFO:0003880","UMLS:C0003614","MEDGEN:1629","DOID:11240","SCTID:126846004"],"synonyms":[{"name":"appendix neoplasm","type":"exact"},{"name":"appendix tumor","type":"exact"},{"name":"appendix tumour","type":"exact"},{"name":"neoplasm of appendix","type":"exact"},{"name":"neoplasm of the appendix","type":"exact"},{"name":"neoplasm of vermiform appendix","type":"exact"},{"name":"tumor of appendix","type":"exact"},{"name":"tumor of the appendix","type":"exact"},{"name":"tumor of vermiform appendix","type":"exact"},{"name":"tumour of appendix","type":"exact"},{"name":"tumour of the appendix","type":"exact"},{"name":"tumour of vermiform appendix","type":"exact"},{"name":"vermiform appendix neoplasm","type":"exact"},{"name":"vermiform appendix neoplasm (disease)","type":"exact"},{"name":"vermiform appendix tumor","type":"exact"},{"name":"vermiform appendix tumour","type":"exact"}],"termid":"MONDO:0001236","xrefs":{"Monarch":{"xref_id":"0001236"}}}


id: MONDO:0018033
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete other immunodeficiency syndromes due to defects in innate immunity (obsolete MONDO:0018033)","secondary_identifiers":["Orphanet:331193"],"termid":"MONDO:0018033","xrefs":{"Monarch":{"xref_id":"0018033"}}}


id: GO:1903468
data:
  {"annotated_genes":["SJAG_03160","SJAG_03695"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113893,119144],"is_not":false,"summary":null,"term":"GO:1903468"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of DNA replication initiation involved in mitotic DNA replication.","definition_xrefs":["GOC:mtg_cell_cycle","GO_REF:0000058","GOC:TermGenie","PMID:1234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA-templated DNA replication initiation","termid":"GO:0032298"},{"relation_name":"is_a","term_name":"positive regulation of mitotic cell cycle DNA replication","termid":"GO:1903465"},{"relation_name":"is_a","term_name":"regulation of mitotic DNA replication initiation","termid":"GO:1903466"},{"relation_name":"positively_regulates","term_name":"mitotic DNA replication initiation","termid":"GO:1902975"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03160":null,"SJAG_03695":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0008150","GO:0006260","GO:0006259","GO:0007049"],"is_obsolete":false,"name":"positive regulation of DNA replication initiation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of DNA replication initiation involved in mitotic DNA replication","type":"narrow"},{"name":"activation of DNA replication initiation involved in mitotic cell cycle DNA replication","type":"narrow"},{"name":"positive regulation of DNA replication initiation involved in mitotic cell cycle DNA replication","type":"exact"},{"name":"up regulation of DNA replication initiation involved in mitotic DNA replication","type":"exact"},{"name":"up regulation of DNA replication initiation involved in mitotic cell cycle DNA replication","type":"exact"},{"name":"up-regulation of DNA replication initiation involved in mitotic DNA replication","type":"exact"},{"name":"up-regulation of DNA replication initiation involved in mitotic cell cycle DNA replication","type":"exact"},{"name":"upregulation of DNA replication initiation involved in mitotic DNA replication","type":"exact"},{"name":"upregulation of DNA replication initiation involved in mitotic cell cycle DNA replication","type":"exact"}],"termid":"GO:1903468","terms_by_termid":{"GO:1903468":null}}


id: PBO:0116286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the TTT complex and regulator of telomere length; subunit of the TTT Hsp90 cochaperone complex that is involved in chromatin remodeling and telomeric chromatin regulation; telomere length regulator involved in the stability or biogenesis of PIKKs such as TORC1; involved in the cellular stress response; may interact with Rsm23p; GFP-fusion protein localizes to the cytoplasm; similar to S. pombe Tti2p","termid":"PBO:0116286"}


id: PBO:0028684
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_establishment_of_mitotic_spindle_pole_body_localization_to_nuclear_envelope","termid":"PBO:0028684"}


id: GO:0110134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A biological process that results in the unequal transmission of alleles, haplotypes, or chromosomes from a parental genome to gametes. In the absence of meiotic drive, the two copies of each gene or chromosome in a diploid organism are transmitted to offspring with equal probability, whereas meiotic drive results in overrepresentation of the driving allele among the surviving products of meiosis.","definition_xrefs":["GOC:mah","PMID:26920473","PMID:29499907","PMID:29322557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive process","termid":"GO:0022414"}],"gene_count":0,"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"meiotic drive","termid":"GO:0110134"}


id: PBO:0016919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug15","termid":"PBO:0016919"}


id: PBO:0066681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RLIG1 pseudogene 3","termid":"PBO:0066681"}


id: PBO:0044249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CWC15 spliceosome associated protein homolog","termid":"PBO:0044249"}


id: PBO:0075352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sosondowah ankyrin repeat domain family member C","termid":"PBO:0075352"}


id: PBO:0057969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3689b","termid":"PBO:0057969"}


id: PBO:0005168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cargo receptor for soluble proteins (predicted)","termid":"PBO:0005168"}


id: PBO:0073330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family A member 6","termid":"PBO:0073330"}


id: GO:0061114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the branches of the pancreas are generated and organized.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of a branching epithelium","termid":"GO:0061138"},{"relation_name":"part_of","term_name":"pancreas morphogenesis","termid":"GO:0061113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"branching involved in pancreas morphogenesis","termid":"GO:0061114"}


id: GO:0034516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vitamin B6 stimulus. Vitamin B6 encompasses pyridoxal, pyridoxamine and pyridoxine and the active form, pyridoxal phosphate.","definition_xrefs":["GOC:rph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to vitamin","termid":"GO:0033273"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to vitamin B6","termid":"GO:0034516"}


id: PBO:0077548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 256 pseudogene 1","termid":"PBO:0077548"}


id: GO:0006024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glycosaminoglycans, any one of a group of linear polysaccharides composed of repeating disaccharide units.","definition_xrefs":["PMID:38500384"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycan biosynthetic process","termid":"GO:0006023"},{"relation_name":"is_a","term_name":"glycosaminoglycan metabolic process","termid":"GO:0030203"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycosaminoglycan biosynthetic process","synonyms":[{"name":"glycosaminoglycan anabolism","type":"exact"},{"name":"glycosaminoglycan biosynthesis","type":"exact"},{"name":"glycosaminoglycan formation","type":"exact"},{"name":"glycosaminoglycan synthesis","type":"exact"}],"termid":"GO:0006024"}


id: MONDO:0015829
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A uterovaginal malformation that is not part of a larger syndrome.","definition_xrefs":["MONDO:patterns/isolated"],"gene_count":0,"genotype_count":0,"name":"obsolete non-syndromic uterovaginal malformation (obsolete MONDO:0015829)","secondary_identifiers":["Orphanet:180065"],"synonyms":[{"name":"isolated uterovaginal malformation","type":"exact"},{"name":"nonsyndromic uterovaginal malformation","type":"exact"}],"termid":"MONDO:0015829","xrefs":{"Monarch":{"xref_id":"0015829"}}}


id: PBO:0042519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 2","termid":"PBO:0042519"}


id: PR:O74746
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DnaJ homolog subfamily C member 8 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02702","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"J domain-containing protein spf31 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1734.05c","secondary_identifiers":["UniProtKB:O74746"],"synonyms":[{"name":"Spom972h-DNAJC8","type":"exact"}],"termid":"PR:O74746"}


id: MONDO:0002176
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A malignant neoplasm involving the connective tissue","gene_count":0,"genotype_count":0,"name":"obsolete connective tissue cancer (obsolete MONDO:0002176)","secondary_identifiers":["SCTID:126598008","MESH:D009372","DOID:201"],"synonyms":[{"name":"cancer of connective tissue","type":"exact"},{"name":"connective tissue cancer","type":"exact"},{"name":"connective tissue neoplasm","type":"broad"},{"name":"malignant connective tissue neoplasm","type":"exact"},{"name":"malignant neoplasm of connective tissue","type":"exact"},{"name":"neoplasm of connective tissues","type":"broad"}],"termid":"MONDO:0002176","xrefs":{"Monarch":{"xref_id":"0002176"}}}


id: FYPO:0007564
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of DNA binding at a Mlu1 cell cycle box (MCB) by a gene product is normal (i.e. indistinguishable from wild type). The relevant gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PMID:8223442","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transcription regulatory region sequence-specific DNA binding","termid":"FYPO:0007382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000653","FYPO:0000257"],"is_obsolete":false,"name":"normal DNA binding at MCB","synonyms":[{"name":"normal DNA binding at Mlu1 cell cycle box","type":"exact"},{"name":"normal MCB DNA binding","type":"exact"},{"name":"normal RNA polymerase II proximal promoter sequence-specific DNA binding at MCB","type":"exact"},{"name":"normal RNA polymerase II proximal promoter sequence-specific DNA binding at Mlu1 cell cycle box","type":"exact"}],"termid":"FYPO:0007564"}


id: GO:0044314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein ubiquitination process in which a polymer of ubiquitin, formed by linkages between lysine residues at position 27 of the ubiquitin monomers, is added to a protein.","definition_xrefs":["PMID:19345326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein polyubiquitination","termid":"GO:0000209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"protein K27-linked ubiquitination","synonyms":[{"name":"protein K27-linked polyubiquitination","type":"exact"}],"termid":"GO:0044314"}


id: PBO:0073480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serum/glucocorticoid regulated kinase 1","termid":"PBO:0073480"}


id: FYPO:0007079
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the initial release of duplicated spindle pole bodies that occurs as part of the second meiotic nuclear division, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal initial meiotic spindle pole body separation in meiosis II","synonyms":[{"name":"normal initial meiotic spindle pole body separation in second meiotic nuclear division","type":"exact"},{"name":"normal initial mitotic SPB separation in meiosis II","type":"exact"},{"name":"normal initial spindle pole body separation at meiosis II","type":"exact"}],"termid":"FYPO:0007079"}


id: MONDO:0001774
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"scleritis","termid":"MONDO:0001718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"posterior scleritis","secondary_identifiers":["DOID:13676","SCTID:267660007","UMLS:C0155357","ICD10CM:H15.03","ICD9:379.07","MEDGEN:509932","icd11.foundation:982348440"],"termid":"MONDO:0001774","xrefs":{"Monarch":{"xref_id":"0001774"}}}


id: PBO:0069278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 534, pseudogene","termid":"PBO:0069278"}


id: MONDO:0013110
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn vitamin metabolic disorder","termid":"MONDO:0005528"},{"relation_name":"is_a","term_name":"disorder of folate metabolism and transport","termid":"MONDO:0017313"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005559"],"is_obsolete":false,"name":"neurodegenerative syndrome due to cerebral folate transport deficiency","secondary_identifiers":["MESH:C567791","OMIM:613068","UMLS:C2751584","DOID:0050719","icd11.foundation:1158040363","MEDGEN:442763","GARD:10594","SCTID:711403001","Orphanet:217382","ICD9:266.2"],"synonyms":[{"name":"cerebral folate deficiency syndrome","type":"related"},{"name":"cerebral folate receptor alpha deficiency","type":"exact"},{"name":"cerebral folate transport deficiency","type":"related"},{"name":"neurodegeneration due to cerebral folate TRANSPORT deficiency","type":"related"},{"name":"neurodegenerative syndrome due to cerebral folate transport deficiency","type":"exact"}],"termid":"MONDO:0013110","xrefs":{"Monarch":{"xref_id":"0013110"}}}


id: PBO:0004486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"16 small nucleolar RNA","termid":"PBO:0004486"}


id: GO:0045631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mechanoreceptor differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuron differentiation","termid":"GO:0045664"},{"relation_name":"regulates","term_name":"mechanoreceptor differentiation","termid":"GO:0042490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mechanoreceptor differentiation","termid":"GO:0045631"}


id: MONDO:0009555
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malocclusion and short stature","secondary_identifiers":["MESH:C565421","UMLS:C1855453","OMIM:248350","MEDGEN:343357"],"synonyms":[{"name":"malocclusion and short stature","type":"exact"}],"termid":"MONDO:0009555","xrefs":{"Monarch":{"xref_id":"0009555"}}}


id: PBO:0063566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PENK antisense RNA 1","termid":"PBO:0063566"}


id: MONDO:0018032
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete constitutional neutropenia with extra-hematopoietic manifestations (obsolete MONDO:0018032)","secondary_identifiers":["Orphanet:331184"],"termid":"MONDO:0018032","xrefs":{"Monarch":{"xref_id":"0018032"}}}


id: FYPO:0001000
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested normally in G1 phase when the cell is subject to nitrogen starvation.","definition_xrefs":["PMID:19366728","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cell cycle arrest in mitotic G1 phase in response to nitrogen starvation","termid":"FYPO:0000711"},{"relation_name":"is_a","term_name":"normally arrested mitotic cell cycle progression","termid":"FYPO:0001025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000298","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000631","FYPO:0000257"],"is_obsolete":false,"name":"normal cell cycle arrest in mitotic G1 phase during nitrogen starvation","synonyms":[{"name":"mitotic G1 phase arrest during nitrogen starvation","type":"exact"},{"name":"normal cell cycle arrest in mitotic G1 phase during nitrogen depletion","type":"exact"},{"name":"normal cell cycle arrest in mitotic G1 phase during nitrogen deprivation","type":"exact"},{"name":"normal mitotic cell cycle arrest in G1 phase during nitrogen starvation","type":"exact"}],"termid":"FYPO:0001000"}


id: PBO:0055166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2587","termid":"PBO:0055166"}


id: PBO:0058581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6715a","termid":"PBO:0058581"}


id: PBO:0082320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase involved in protein folding and the response to stress; plays a role in SRP-dependent cotranslational protein-membrane targeting and translocation; member of the heat shock protein 70 (HSP70) family; localized to the cytoplasm; SSA3 has a paralog, SSA4, that arose from the whole genome duplication","termid":"PBO:0082320"}


id: MONDO:0000658
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete mu chain disease (obsolete MONDO:0000658)","termid":"MONDO:0000658","xrefs":{"Monarch":{"xref_id":"0000658"}}}


id: MONDO:0001954
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A thrombophlebitis that is characterized by repeated occurrences of thrombophlebitis in different locations.","definition_xrefs":["DOID:14392"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thrombophlebitis","termid":"MONDO:0002800"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thrombophlebitis migrans","secondary_identifiers":["ICD10CM:I82.1","SCTID:31268005","icd11.foundation:674623750","UMLS:C0152250","ICD9:453.1","MEDGEN:508947"],"termid":"MONDO:0001954","xrefs":{"Monarch":{"xref_id":"0001954"}}}


id: MONDO:0004173
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare adenocarcinoma arising from Skene gland. It presents as a periurethral or anterior vaginal submucosal mass. It is characterized by morphological features similar to prostate adenocarcinoma.","definition_xrefs":["NCIT:C39863"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paraurethral gland cancer","termid":"MONDO:0001869"},{"relation_name":"is_a","term_name":"vulvar adenocarcinoma","termid":"MONDO:0024336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adenocarcinoma of skene gland origin","secondary_identifiers":["UMLS:C1527427","DOID:7284","MEDGEN:282906"],"synonyms":[{"name":"Skene gland carcinoma","type":"related"},{"name":"adenocarcinoma of Skene gland","type":"exact"},{"name":"adenocarcinoma of Skene gland origin","type":"exact"},{"name":"carcinoma of Skene gland","type":"exact"},{"name":"carcinoma of Skene's gland","type":"exact"},{"name":"carcinoma of paraurethral gland","type":"exact"},{"name":"carcinoma of the paraurethral gland","type":"exact"},{"name":"paraurethral gland adenocarcinoma","type":"exact"},{"name":"paraurethral gland carcinoma","type":"exact"}],"termid":"MONDO:0004173","xrefs":{"Monarch":{"xref_id":"0004173"}}}


id: SO:0001853
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-palindromic sequence found in the promoters of genes whose expression is regulated in response to androgen.","definition_xrefs":["PMID:21796522"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_motif","termid":"SO:0000713"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"androgen_response_element","synonyms":[{"name":"ARE","type":"exact"},{"name":"androgen response element","type":"exact"}],"termid":"SO:0001853"}


id: MONDO:0001692
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by recurrent sexual urges, fantasies, or behaviors involving sexual activity with a prepubescent child or children.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paraphilic disorder","termid":"MONDO:0000596"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pedophilia","secondary_identifiers":["MESH:D010378","ICD10CM:F65.4","MEDGEN:18340","DOID:13351","SCTID:84002002","UMLS:C0030764","NCIT:C94355","ICD9:302.2"],"synonyms":[{"name":"Paedophilia","type":"exact"}],"termid":"MONDO:0001692","xrefs":{"Monarch":{"xref_id":"0001692"}}}


id: GO:0015903
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of fluconazole into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Fluconazole is an antifungal drug used for oral candidiasis and cryptococcal meningitis; it is still under study for treatment of vaginal candidiasis and other fungal infections.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"fluconazole transport","termid":"GO:0015903"}


id: PBO:0024865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio family RNA-binding protein Mcp2","termid":"PBO:0024865"}


id: GO:0016122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving xanthophylls, oxygen-containing carotenoids.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotenoid metabolic process","termid":"GO:0016116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"xanthophyll metabolic process","synonyms":[{"name":"xanthophyll metabolism","type":"exact"}],"termid":"GO:0016122"}


id: PBO:0066738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 35","termid":"PBO:0066738"}


id: MONDO:0006443
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete tenosynovial giant cell tumor (obsolete MONDO:0006443)","termid":"MONDO:0006443","xrefs":{"Monarch":{"xref_id":"0006443"}}}


id: GO:0006590
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of either of the compounds secreted by the thyroid gland, mainly thyroxine and triiodothyronine. This is achieved by the iodination and joining of tyrosine molecules to form the precursor thyroglobin, proteolysis of this precursor gives rise to the thyroid hormones.","definition_xrefs":["ISBN:0716720094","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid hormone metabolic process","termid":"GO:0042403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thyroid hormone generation","secondary_identifiers":["Reactome:R-HSA-209968"],"termid":"GO:0006590"}


id: GO:0051482
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the concentration of calcium ions in the cytosol that occurs as part of a PLC-activating G protein-coupled receptor signaling pathway. G-protein-activated PLC hydrolyses phosphatidylinositol-bisphosphate (PIP2) to release diacylglycerol (DAG) and inositol trisphosphate (IP3). IP3 then binds to calcium release channels in the endoplasmic reticulum (ER) to trigger calcium ion release into the cytosol.","definition_xrefs":["GOC:ai","GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cytosolic calcium ion concentration involved in phospholipase C-activating G protein-coupled signaling pathway (obsolete GO:0051482)","synonyms":[{"name":"elevation of calcium ion concentration in cytoplasm during G-protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"broad"},{"name":"elevation of calcium ion concentration in cytosol during G-protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"related"},{"name":"elevation of cytoplasmic calcium ion concentration during G-protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"broad"},{"name":"elevation of cytoplasmic calcium ion concentration during G-protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"broad"},{"name":"elevation of cytosolic calcium ion concentration during G-protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"related"},{"name":"elevation of cytosolic calcium ion concentration involved in G-protein signaling coupled to IP3 second messenger","type":"exact"},{"name":"elevation of cytosolic calcium ion concentration involved in phospholipase C-activating G-protein coupled signaling pathway","type":"exact"},{"name":"positive regulation of cytosolic calcium ion concentration involved in phospholipase C-activating G-protein coupled signaling pathway","type":"exact"}],"termid":"GO:0051482"}


id: MONDO:0004823
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete dextrocardia (obsolete MONDO:0004823)","termid":"MONDO:0004823","xrefs":{"Monarch":{"xref_id":"0004823"}}}


id: GO:0098695
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Any inositol 1,4,5-trisphosphate receptor activity that is involved in regulation of postsynaptic cytosolic calcium ion concentration.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol 1,4,5-trisphosphate-gated calcium channel activity","termid":"GO:0005220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"inositol 1,4,5-trisphosphate receptor activity involved in regulation of postsynaptic cytosolic calcium levels","synonyms":[{"name":"IP3 receptor activity involved in regulation of postsynaptic cytosolic calcium levels","type":"exact"}],"termid":"GO:0098695"}


id: MONDO:0004160
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The involuntary loss of urine in females secondary to insufficient strength of the pelvic floor muscles; this can result from physical changes following pregnancy and childbirth, or as a response to a decrease in estrogen during menopause.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urinary bladder disorder","termid":"MONDO:0006026"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"female stress incontinence","secondary_identifiers":["ICD9:625.6","UMLS:C0038437","DOID:724","MEDGEN:21346","NCIT:C35042"],"synonyms":[{"name":"female urinary stress incontinence","type":"exact"},{"name":"stress incontinence - female","type":"exact"}],"termid":"MONDO:0004160","xrefs":{"Monarch":{"xref_id":"0004160"}}}


id: PBO:0089217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hrd1 ubiquitin ligase complex SEL1/TPR repeat subunit","termid":"PBO:0089217"}


id: PBO:0082754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the septin ring, required for cytokinesis; septins are GTP-binding proteins that assemble into rod-like hetero-oligomers that can associate to form filaments; septin rings at the mother-bud neck act as scaffolds for recruiting cell division factors and as barriers to prevent diffusion of specific proteins between mother and daughter cells; N-terminus interacts with phosphatidylinositol-4,5-bisphosphate; protein abundance increases under DNA damage stress","termid":"PBO:0082754"}


id: PBO:0057551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 664b","termid":"PBO:0057551"}


id: FYPO:0005588
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a phosphoinositide measured in a cell is lower than normal. A phosphoinositide is any phosphatidylinositol that is phosphorylated at one or more of the hydroxy groups of inositol.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased phospholipid level","termid":"FYPO:0001289"},{"relation_name":"is_a","term_name":"altered cellular phosphoinositide level","termid":"FYPO:0001290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular phosphoinositide level","synonyms":[{"name":"decreased PI accumulation","type":"related"},{"name":"decreased cellular PI level","type":"related"},{"name":"decreased cellular phosphoinositide level during mitotic cell cycle","type":"related"},{"name":"decreased cellular phosphoinositide level during vegetative growth","type":"exact"},{"name":"reduced cellular phosphoinositide level","type":"exact"}],"termid":"FYPO:0005588"}


id: GO:0004371
data:
  {"annotated_genes":["SJAG_04320"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80384],"is_not":false,"summary":null,"term":"GO:0004371"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + glycerone = ADP + glycerone phosphate + 2 H+.","definition_xrefs":["EC:2.7.1.29","RHEA:15773"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04320":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016301","GO:0003674"],"is_obsolete":false,"name":"glycerone kinase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R01011","MetaCyc:GLYCERONE-KINASE-RXN"],"synonyms":[{"name":"ATP:glycerone phosphotransferase activity","type":"related"},{"name":"acetol kinase (phosphorylating)","type":"related"},{"name":"acetol kinase activity","type":"related"},{"name":"dihydroxyacetone kinase activity","type":"related"}],"termid":"GO:0004371","terms_by_termid":{"GO:0004371":null}}


id: MONDO:0970995
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited primary ovarian failure","termid":"MONDO:0019852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"premature ovarian failure 24","secondary_identifiers":["UMLS:C5935624","MEDGEN:1858807","OMIM:620840"],"termid":"MONDO:0970995","xrefs":{"Monarch":{"xref_id":"0970995"}}}


id: GO:0071083
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphaV-beta3 integrin complex bound to the cell surface protein CD47 and the low-affinity immunoglobulin epsilon Fc receptor (FCER2).","definition_xrefs":["PMID:10037797"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"alphaV-beta3 integrin-CD47-FCER2 complex","synonyms":[{"name":"ITGAV-ITGB3-CD447-FCER2 complex","type":"narrow"}],"termid":"GO:0071083"}


id: PR:Q9UTM0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- iec1 gene.","definition_xrefs":["UniProtKB:Q9UTM0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INO80 complex subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC144.02","synonyms":[{"name":"Spom972h-iec1","type":"exact"}],"termid":"PR:Q9UTM0"}


id: PATO:0000025
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A single physical entity inhering in an bearer by virtue of the bearer's quantities or relative ratios of subparts.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"composition","secondary_identifiers":["PATO:0002015"],"synonyms":[{"name":"composed of","type":"exact"},{"name":"compositionality","type":"exact"},{"name":"content","type":"exact"},{"name":"structure, composition","type":"exact"}],"termid":"PATO:0000025"}


id: GO:0016434
data:
  {"annotated_genes":["SJAG_02417","SJAG_03877"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97436,80683],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009383"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + rRNA = S-adenosyl-L-homocysteine + rRNA containing methylcytosine.","definition_xrefs":["GOC:go-curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA methyltransferase activity","termid":"GO:0008649"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02417":null,"SJAG_03877":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0016741","GO:0003674","GO:0003824","GO:0140098","GO:0016740"],"is_obsolete":false,"name":"rRNA (cytosine) methyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0016434","terms_by_termid":{"GO:0009383":null}}


id: PBO:0054148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1515","termid":"PBO:0054148"}


id: GO:0051895
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of focal adhesion assembly, the establishment and maturation of focal adhesions.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell-matrix adhesion","termid":"GO:0001953"},{"relation_name":"is_a","term_name":"regulation of focal adhesion assembly","termid":"GO:0051893"},{"relation_name":"is_a","term_name":"negative regulation of cell-substrate junction organization","termid":"GO:0150118"},{"relation_name":"is_a","term_name":"negative regulation of cell junction assembly","termid":"GO:1901889"},{"relation_name":"negatively_regulates","term_name":"focal adhesion assembly","termid":"GO:0048041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0007155","GO:0044085"],"is_obsolete":false,"name":"negative regulation of focal adhesion assembly","synonyms":[{"name":"down regulation of focal adhesion formation","type":"exact"},{"name":"down-regulation of focal adhesion formation","type":"exact"},{"name":"downregulation of focal adhesion formation","type":"exact"},{"name":"inhibition of focal adhesion formation","type":"narrow"}],"termid":"GO:0051895"}


id: MONDO:0018378
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An area of necrotic bone in the mandible or maxilla.","definition_xrefs":["NCIT:C63924"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary avascular necrosis","termid":"MONDO:0018374"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteonecrosis of the jaw","secondary_identifiers":["UMLS:C2711248","GARD:21663","ICD9:733.45","Orphanet:399293","MEDGEN:751019","SCTID:441809006"],"synonyms":[{"name":"ONJ","type":"exact"},{"name":"jaw osteonecrosis","type":"exact"},{"name":"osteonecrosis of jaw","type":"exact"}],"termid":"MONDO:0018378","xrefs":{"Monarch":{"xref_id":"0018378"}}}


id: PBO:0062848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OSTN antisense RNA 1","termid":"PBO:0062848"}


id: PBO:0056950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 16-2","termid":"PBO:0056950"}


id: PBO:0002520
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.2.3.1","termid":"PBO:0002520"}


id: PBO:0071150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 14","termid":"PBO:0071150"}


id: PBO:0031790
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_fusion_during_conjugation","termid":"PBO:0031790"}


id: GO:1901129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of gentamycin.","definition_xrefs":["GOC:yaf","GOC:TermGenie","UniPathway:UPA00967"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycoside antibiotic catabolic process","termid":"GO:0030649"},{"relation_name":"is_a","term_name":"polyol catabolic process","termid":"GO:0046174"},{"relation_name":"is_a","term_name":"gentamycin metabolic process","termid":"GO:1901128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"gentamycin catabolic process","synonyms":[{"name":"gentamycin breakdown","type":"exact"},{"name":"gentamycin catabolism","type":"exact"},{"name":"gentamycin degradation","type":"exact"}],"termid":"GO:1901129"}


id: PBO:0039977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 5A","termid":"PBO:0039977"}


id: GO:0035702
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of regulating the proliferation and elimination of monocytes such that the total number of monocytes within a whole or part of an organism is stable over time in the absence of an outside stimulus.","definition_xrefs":["GOC:BHF","CL:0000576","PMID:18832716"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte homeostasis","termid":"GO:0001776"},{"relation_name":"is_a","term_name":"myeloid cell homeostasis","termid":"GO:0002262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"monocyte homeostasis","termid":"GO:0035702"}


id: PBO:0088318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"La protein, tRNA chaperone Sla1","termid":"PBO:0088318"}


id: GO:1904721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of mRNA endonucleolytic cleavage involved in unfolded protein response.","definition_xrefs":["GO_REF:0000058","PMID:19328063","GOC:PARL","GOC:bf","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of mRNA endonucleolytic cleavage involved in unfolded protein response (obsolete GO:1904721)","synonyms":[{"name":"down regulation of HAC1 mRNA cleavage","type":"narrow"},{"name":"down regulation of HAC1-type intron splice site recognition and cleavage","type":"narrow"},{"name":"down regulation of IRE1-mediated XBP-1 mRNA cleavage","type":"narrow"},{"name":"down regulation of XBP1 mRNA cleavage","type":"narrow"},{"name":"down regulation of mRNA endonucleolytic cleavage involved in unfolded protein response","type":"exact"},{"name":"down-regulation of HAC1 mRNA cleavage","type":"narrow"},{"name":"down-regulation of HAC1-type intron splice site recognition and cleavage","type":"narrow"},{"name":"down-regulation of IRE1-mediated XBP-1 mRNA cleavage","type":"narrow"},{"name":"down-regulation of XBP1 mRNA cleavage","type":"narrow"},{"name":"down-regulation of mRNA endonucleolytic cleavage involved in unfolded protein response","type":"exact"},{"name":"downregulation of HAC1 mRNA cleavage","type":"narrow"},{"name":"downregulation of HAC1-type intron splice site recognition and cleavage","type":"narrow"},{"name":"downregulation of IRE1-mediated XBP-1 mRNA cleavage","type":"narrow"},{"name":"downregulation of XBP1 mRNA cleavage","type":"narrow"},{"name":"downregulation of mRNA endonucleolytic cleavage involved in unfolded protein response","type":"exact"},{"name":"inhibition of HAC1 mRNA cleavage","type":"narrow"},{"name":"inhibition of HAC1-type intron splice site recognition and cleavage","type":"narrow"},{"name":"inhibition of IRE1-mediated XBP-1 mRNA cleavage","type":"narrow"},{"name":"inhibition of XBP1 mRNA cleavage","type":"narrow"},{"name":"inhibition of mRNA endonucleolytic cleavage involved in unfolded protein response","type":"narrow"},{"name":"negative regulation of HAC1 mRNA cleavage","type":"narrow"},{"name":"negative regulation of HAC1-type intron splice site recognition and cleavage","type":"narrow"},{"name":"negative regulation of IRE1-mediated XBP-1 mRNA cleavage","type":"narrow"},{"name":"negative regulation of XBP1 mRNA cleavage","type":"narrow"}],"termid":"GO:1904721"}


id: GO:0035959
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the glyoxylate cycle by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:11024040","PMID:17875938","PMID:19686338","GOC:dgf"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of glyoxylate cycle by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:0035959)","synonyms":[{"name":"positive regulation of glyoxylate bypass by positive regulation of transcription from Pol II promoter","type":"exact"},{"name":"positive regulation of glyoxylate bypass by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glyoxylate bypass by up regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glyoxylate bypass by up-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glyoxylate bypass by upregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glyoxylate cycle by activation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glyoxylate cycle by positive regulation of transcription from Pol II promoter","type":"exact"},{"name":"positive regulation of glyoxylate cycle by stimulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glyoxylate cycle by up regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glyoxylate cycle by up-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glyoxylate cycle by upregulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0035959"}


id: PBO:0002608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Hca4 (predicted)","termid":"PBO:0002608"}


id: PBO:0083657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endonuclease I-SceIV; involved in intron mobility; encoded by a mobile group I intron within the mitochondrial COX1 gene","termid":"PBO:0083657"}


id: GO:1990491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of methane from methanol and hydrogen.","definition_xrefs":["GOC:mengo_curators","PMID:16347126"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methanogenesis, from methanol","termid":"GO:0019387"},{"relation_name":"is_a","term_name":"hydrogen metabolic process","termid":"GO:1902421"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006091","GO:0008150"],"is_obsolete":false,"name":"methane biosynthetic process from methanol and hydrogen","synonyms":[{"name":"methane biosynthesis from methanol and hydrogen","type":"exact"},{"name":"methanogenesis from methanol and hydrogen","type":"exact"}],"termid":"GO:1990491"}


id: GO:0141023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts host cell adhesion ito its extracellular matrix. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated disruption of host cell-cell adhesion","synonyms":[{"name":"disruption by symbiont of host cell-cell adhesion","type":"exact"}],"termid":"GO:0141023"}


id: PBO:0064018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 52","termid":"PBO:0064018"}


id: PBO:0036504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-Not complex NOT box subunit Not2","termid":"PBO:0036504"}


id: MONDO:0002303
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Blockage of the central retinal vein.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vein disorder","termid":"MONDO:0004634"},{"relation_name":"is_a","term_name":"retinal vein occlusion","termid":"MONDO:0006951"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"central retinal vein occlusion","secondary_identifiers":["ICD9:362.35","GARD:21734","Orphanet:411527","DOID:2450","MEDGEN:509679","icd11.foundation:1146548497","SCTID:68478007","NCIT:C118859","ICD10CM:H34.81","UMLS:C0154841"],"synonyms":[{"name":"central retinal Venous occlusion","type":"exact"},{"name":"central retinal vein retinal vein occlusion","type":"exact"},{"name":"retinal vein occlusion of central retinal vein","type":"exact"}],"termid":"MONDO:0002303","xrefs":{"Monarch":{"xref_id":"0002303"}}}


id: PBO:0087633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the EGO/GSE complex; the vacuolar/endosomal membrane associated EGO/GSE complex regulates exit from rapamycin-induced growth arrest, stimulating microautophagy and sorting of Gap1p from the endosome to the plasma membrane; identified by homology to Ashbya gossypii; EGO2 has a paralog, EGO4, that arose from the whole genome duplication","termid":"PBO:0087633"}


id: PBO:0040983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biorientation of chromosomes in cell division 1 pseudogene 1","termid":"PBO:0040983"}


id: GO:0014724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of twitch skeletal muscle contraction.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of skeletal muscle contraction","termid":"GO:0014819"},{"relation_name":"regulates","term_name":"twitch skeletal muscle contraction","termid":"GO:0014721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of twitch skeletal muscle contraction","termid":"GO:0014724"}


id: MONDO:0851103
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A female reproductive system disease that is located in Bartholin's gland.","definition_xrefs":["DOID:60002"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female reproductive system disorder","termid":"MONDO:0002263"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bartholin's gland disease","secondary_identifiers":["MEDGEN:635229","UMLS:C0477776"],"termid":"MONDO:0851103","xrefs":{"Monarch":{"xref_id":"0851103"}}}


id: PBO:0068819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 57, pseudogene","termid":"PBO:0068819"}


id: MONDO:0859163
data:
  {"annotated_genes":["SJAG_02189","SJAG_02812"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88349,88350],"is_not":false,"summary":null,"term":"MONDO:0859163"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02189":null,"SJAG_02812":null},"genotype_count":0,"is_obsolete":false,"name":"Faundes-Banka syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1782083","OMIM:619376","UMLS:C5543554"],"termid":"MONDO:0859163","terms_by_termid":{"MONDO:0859163":null},"xrefs":{"Monarch":{"xref_id":"0859163"}}}


id: FYPO:0004658
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, and has two nuclei and more than one septum.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"inviable vegetative cell","termid":"FYPO:0001489"},{"relation_name":"is_a","term_name":"binucleate multiseptate vegetative cell","termid":"FYPO:0001223"},{"relation_name":"is_a","term_name":"inviable vegetative cell","termid":"FYPO:0001489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0001320","FYPO:0000004","FYPO:0001985","FYPO:0000032","FYPO:0005447"],"is_obsolete":false,"name":"inviable binucleate multiseptate vegetative cell","synonyms":[{"name":"inviable binucleate multiseptate cell during vegetative growth","type":"exact"},{"name":"inviable binucleate multiseptate vegetative cell during mitotic cell cycle","type":"related"},{"name":"lethal; binucleate multiseptate vegetative cell","type":"exact"}],"termid":"FYPO:0004658"}


id: PBO:0030550
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histidine_import","termid":"PBO:0030550"}


id: PBO:0076699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TCERG1 pseudogene 1","termid":"PBO:0076699"}


id: MONDO:0021160
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An cystitis caused by infection with Neisseria gonorrhoeae.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gonorrhea","termid":"MONDO:0004277"},{"relation_name":"is_a","term_name":"bacterial urinary tract infection","termid":"MONDO:0005247"},{"relation_name":"is_a","term_name":"cystitis","termid":"MONDO:0006032"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gonococcal cystitis","secondary_identifiers":["icd11.foundation:638246732","SCTID:197848003","MEDGEN:633096","UMLS:C0473230"],"synonyms":[{"name":"Neisseria gonorrhoeae caused cystitis","type":"exact"},{"name":"Neisseria gonorrhoeae cystitis","type":"exact"}],"termid":"MONDO:0021160","xrefs":{"Monarch":{"xref_id":"0021160"}}}


id: GO:0071849
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which the cell cycle is halted during G1 phase, as a result of deprivation of nitrogen.","definition_xrefs":["GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete G1 cell cycle arrest in response to nitrogen starvation (obsolete GO:0071849)","termid":"GO:0071849"}


id: PBO:0076798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor, mitochondrial","termid":"PBO:0076798"}


id: SO:0001250
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A fingerprint_map is a physical map composed of restriction fragments.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_part","term_name":"restriction_fragment","termid":"SO:0000412"},{"relation_name":"is_a","term_name":"fragment_assembly","termid":"SO:0001249"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fingerprint_map","synonyms":[{"name":"BACmap","type":"exact"},{"name":"FPC","type":"exact"},{"name":"FPCmap","type":"exact"},{"name":"fingerprint map","type":"exact"},{"name":"restriction map","type":"exact"}],"termid":"SO:0001250"}


id: GO:0046059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of dAMP, deoxyadenosine monophosphate (2'-deoxyadenosine 5'-phosphate).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleotide catabolic process","termid":"GO:0009155"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside monophosphate catabolic process","termid":"GO:0009172"},{"relation_name":"is_a","term_name":"dAMP metabolic process","termid":"GO:0046053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"dAMP catabolic process","synonyms":[{"name":"dAMP breakdown","type":"exact"},{"name":"dAMP catabolism","type":"exact"},{"name":"dAMP degradation","type":"exact"}],"termid":"GO:0046059"}


id: PBO:0004022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial PPR repeat protein Ppr3","termid":"PBO:0004022"}


id: PBO:0038386
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-epiphyte_of","termid":"PBO:0038386"}


id: PBO:0005328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR94","termid":"PBO:0005328"}


id: PBO:0038380
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_chemical_role","termid":"PBO:0038380"}


id: PBO:0083826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential subunit of the Pan2p-Pan3p poly(A)-ribonuclease complex; poly (A) mRNA binding subunit which recruits mRNA to the complex; the Pan2p-Pan3p complex controls poly(A) tail length and regulates the stoichiometry and activity of postreplication repair complexes","termid":"PBO:0083826"}


id: GO:0032898
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of a neurotrophin due to biosynthesis or secretion by cells in a neuron's target field, resulting in an increase in its intracellular or extracellular levels. A neurotrophin is any of a family of growth factors that prevent apoptosis in neurons and promote nerve growth.","definition_xrefs":["GOC:ecd","GOC:mtg_MIT_16mar07","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neurotrophin production","termid":"GO:0032898"}


id: PBO:0072155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 32","termid":"PBO:0072155"}


id: GO:0046501
data:
  {"annotated_genes":["SJAG_04109","SJAG_05283","SJAG_03961","SJAG_04944","SJAG_02896","SJAG_01372","SJAG_02876","SJAG_00097"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57318,59546,65914,63949,60690,68926,63936,81783],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006782"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving protoporphyrinogen IX, the specific substrate for the enzyme ferrochelatase, which catalyzes the insertion of iron to form protoheme. It is probably also the substrate for chlorophyll formation.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyrin-containing compound metabolic process","termid":"GO:0006778"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00097":null,"SJAG_01372":null,"SJAG_02876":null,"SJAG_02896":null,"SJAG_03961":null,"SJAG_04109":null,"SJAG_04944":null,"SJAG_05283":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"protoporphyrinogen IX metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null},"synonyms":[{"name":"protoporphyrinogen IX metabolism","type":"exact"}],"termid":"GO:0046501","terms_by_termid":{"GO:0006782":null}}


id: GO:0005124
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to scavenger receptors, a family of proteins that are expressed on myeloid cells and are involved in the uptake of effete cellular components and foreign particles.","definition_xrefs":["GOC:ceb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"scavenger receptor binding","synonyms":[{"name":"scavenger receptor ligand","type":"narrow"}],"termid":"GO:0005124"}


id: PBO:0077067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THUMP domain containing 3","termid":"PBO:0077067"}


id: GO:2001062
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to xylan.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide binding","termid":"GO:0030247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"xylan binding","termid":"GO:2001062"}


id: PBO:0088286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1774 family multi-spanning conserved fungal membrane protein","termid":"PBO:0088286"}


id: MONDO:0022606
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease that involves the pharyngeal system development.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"branchial arch disease","synonyms":[{"name":"disease of pharyngeal system development","type":"exact"},{"name":"disorder of pharyngeal system development","type":"exact"},{"name":"pharyngeal system development disease","type":"exact"}],"termid":"MONDO:0022606","xrefs":{"Monarch":{"xref_id":"0022606"}}}


id: GO:2000796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any Notch signaling pathway that is involved in negative regulation of venous endothelial cell fate commitment.","definition_xrefs":["PMID:11585794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Notch signaling pathway","termid":"GO:0007219"},{"relation_name":"part_of","term_name":"negative regulation of venous endothelial cell fate commitment","termid":"GO:2000788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"Notch signaling pathway involved in negative regulation of venous endothelial cell fate commitment","synonyms":[{"name":"N signaling pathway involved in negative regulation of venous endothelial cell fate commitment","type":"exact"},{"name":"Notch receptor signaling pathway involved in negative regulation of venous endothelial cell fate commitment","type":"exact"},{"name":"Notch receptor signalling pathway involved in negative regulation of venous endothelial cell fate commitment","type":"exact"},{"name":"Notch signalling pathway involved in negative regulation of venous endothelial cell fate commitment","type":"exact"},{"name":"Notch-receptor signaling pathway involved in negative regulation of venous endothelial cell fate commitment","type":"exact"},{"name":"Notch-receptor signalling pathway involved in negative regulation of venous endothelial cell fate commitment","type":"exact"}],"termid":"GO:2000796"}


id: MONDO:0800099
data:
  {"annotated_genes":["SJAG_02623"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87231],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012990"}]},"cv_name":"mondo","definition":"A retinopathy, typically severe, and early onset, caused by biallelic variants in the RDH12 gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02623":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"RDH12-related recessive retinopathy","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"LCA13","type":"narrow"},{"name":"Leber congenital amaurosis 13","type":"narrow"},{"name":"Leber congenital amaurosis caused by mutation in RDH12","type":"narrow"},{"name":"Leber congenital amaurosis type 13","type":"narrow"},{"name":"RDH12 Leber congenital amaurosis","type":"narrow"},{"name":"RDH12-related recessive retinopathy","type":"exact"},{"name":"retinitis pigmentosa 53","type":"related"}],"termid":"MONDO:0800099","terms_by_termid":{"MONDO:0012990":null},"xrefs":{"Monarch":{"xref_id":"0800099"}}}


id: FYPO:0006267
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which telomere clustering and tethering at the nuclear periphery is increased during mitotic metaphase.","definition_xrefs":["PMID:25778919","PomBase:mah","GO:0120109"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"is_a","term_name":"abnormal telomere localization to nuclear periphery","termid":"FYPO:0007418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased telomere clustering and tethering at nuclear periphery during mitotic metaphase","synonyms":[{"name":"decreased mitotic telomere dispersion during metaphase","type":"exact"},{"name":"increased telomere clustering and tethering at nuclear periphery during metaphase of mitotic cell cycle","type":"exact"},{"name":"increased telomere clustering and tethering at nuclear periphery during mitotic metaphase during vegetative growth","type":"exact"},{"name":"increased telomere clustering at nuclear periphery during mitotic metaphase","type":"related"}],"termid":"FYPO:0006267"}


id: MONDO:0004089
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive, human papillomavirus-related squamous cell carcinoma that arises from the penis. It is characterized by the presence of nests of small malignant cells. The malignant cells tend to invade deeply into the adjacent tissues. Comedo-type necrosis is often present.","definition_xrefs":["NCIT:C6980"],"direct_ancestors":[{"relation_name":"is_a","term_name":"basaloid squamous cell carcinoma","termid":"MONDO:0003486"},{"relation_name":"is_a","term_name":"human papillomavirus-related penile squamous cell carcinoma","termid":"MONDO:0020656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"basaloid carcinoma of the penis","secondary_identifiers":["MEDGEN:231418","ONCOTREE:BPSCC","UMLS:C1332462","DOID:7047"],"synonyms":[{"name":"BPSCC","type":"related"},{"name":"basaloid carcinoma of penis","type":"exact"},{"name":"basaloid carcinoma of the penis","type":"exact"},{"name":"basaloid penile squamous cell carcinoma","type":"exact"},{"name":"basaloid squamous cell carcinoma of penis","type":"exact"},{"name":"basaloid squamous cell carcinoma of the penis","type":"exact"},{"name":"penis basaloid carcinoma","type":"related"},{"name":"penis basaloid squamous cell carcinoma","type":"exact"},{"name":"squamous cell carcinoma of penis, basaloid type","type":"exact"},{"name":"squamous cell carcinoma of the penis, basaloid type","type":"exact"}],"termid":"MONDO:0004089","xrefs":{"Monarch":{"xref_id":"0004089"}}}


id: MONDO:0019966
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete thoracic outlet syndrome (obsolete MONDO:0019966)","termid":"MONDO:0019966","xrefs":{"Monarch":{"xref_id":"0019966"}}}


id: MONDO:1011308
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital nervous system disorder that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital nervous system disorder, non-human animal","termid":"MONDO:1011308","xrefs":{"Monarch":{"xref_id":"1011308"}}}


id: PBO:0066075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid receptor responder 2 pseudogene 3","termid":"PBO:0066075"}


id: PBO:0030200
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_cytochalasin_B","termid":"PBO:0030200"}


id: PBO:0078035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 25 (non-functional)","termid":"PBO:0078035"}


id: GO:0030958
data:
  {"annotated_genes":["SJAG_03042","SJAG_03916","SJAG_02621"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[93082,114063,119959],"is_not":false,"summary":null,"term":"GO:0030958"}]},"cv_name":"cellular_component","definition":"A protein complex required for heterochromatin assembly; contains an Argonaute homolog, a chromodomain protein, and at least one additional protein; named for RNA-induced initiation of transcriptional gene silencing.","definition_xrefs":["PMID:14704433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNAi effector complex","termid":"GO:0031332"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear chromosome","termid":"GO:0000228"},{"relation_name":"part_of","term_name":"heterochromatin","termid":"GO:0000792"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03042":null,"SJAG_03916":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634","GO:0005694"],"is_obsolete":false,"name":"RITS complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030958","terms_by_termid":{"GO:0030958":null}}


id: GO:2000062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of ureter smooth muscle cell differentiation.","definition_xrefs":["GOC:obol","GOC:yaf","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of smooth muscle cell differentiation","termid":"GO:0051151"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of ureter smooth muscle cell differentiation","termid":"GO:2000061"},{"relation_name":"negatively_regulates","term_name":"ureter smooth muscle cell differentiation","termid":"GO:0072193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of ureter smooth muscle cell differentiation","termid":"GO:2000062"}


id: SO:0001087
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Posttranslationally formed amino acid bonds.","definition_xrefs":["UniProt:curation_manual","EBIBS:GAR"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0001087 cross_link (obsolete SO:0001087)","synonyms":[{"name":"cross link","type":"exact"},{"name":"crosslink","type":"related"}],"termid":"SO:0001087"}


id: GO:0043304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of mast cell degranulation.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myeloid leukocyte mediated immunity","termid":"GO:0002886"},{"relation_name":"is_a","term_name":"regulation of leukocyte degranulation","termid":"GO:0043300"},{"relation_name":"regulates","term_name":"mast cell degranulation","termid":"GO:0043303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of mast cell degranulation","synonyms":[{"name":"regulation of mast cell granule exocytosis","type":"exact"}],"termid":"GO:0043304"}


id: GO:1905269
data:
  {"annotated_genes":["SJAG_02342","SJAG_00142","SJAG_02592","SJAG_02990"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100779],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031453"},{"annotations":[92998],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090053"},{"annotations":[112193,92999,96186],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090055"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of chromatin organization.","definition_xrefs":["GO_REF:0000058","GOC:pr","GOC:vw","GOC:TermGenie","PMID:654321"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chromatin organization","termid":"GO:1902275"},{"relation_name":"is_a","term_name":"positive regulation of chromosome organization","termid":"GO:2001252"},{"relation_name":"positively_regulates","term_name":"chromatin organization","termid":"GO:0006325"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00142":null,"SJAG_02342":null,"SJAG_02592":null,"SJAG_02990":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006325"},{"rel_name":"regulates","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006325"],"is_obsolete":false,"name":"positive regulation of chromatin organization","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1903310","GO:0045799"],"synonyms":[{"name":"activation of chromatin assembly or disassembly","type":"narrow"},{"name":"activation of chromatin organisation","type":"narrow"},{"name":"activation of chromatin organization","type":"narrow"},{"name":"activation of establishment or maintenance of chromatin architecture","type":"narrow"},{"name":"positive regulation of chromatin assembly or disassembly","type":"related"},{"name":"positive regulation of chromatin assembly/disassembly","type":"related"},{"name":"positive regulation of chromatin modification","type":"related"},{"name":"positive regulation of chromatin organisation","type":"exact"},{"name":"positive regulation of establishment or maintenance of chromatin architecture","type":"exact"},{"name":"stimulation of chromatin assembly or disassembly","type":"narrow"},{"name":"up regulation of chromatin assembly or disassembly","type":"related"},{"name":"up regulation of chromatin organisation","type":"exact"},{"name":"up regulation of chromatin organization","type":"exact"},{"name":"up regulation of establishment or maintenance of chromatin architecture","type":"exact"},{"name":"up-regulation of chromatin assembly or disassembly","type":"related"},{"name":"up-regulation of chromatin organisation","type":"exact"},{"name":"up-regulation of chromatin organization","type":"exact"},{"name":"up-regulation of establishment or maintenance of chromatin architecture","type":"exact"},{"name":"upregulation of chromatin assembly or disassembly","type":"exact"},{"name":"upregulation of chromatin organisation","type":"exact"},{"name":"upregulation of chromatin organization","type":"exact"},{"name":"upregulation of establishment or maintenance of chromatin architecture","type":"exact"}],"termid":"GO:1905269","terms_by_termid":{"GO:0031453":null,"GO:0090053":null,"GO:0090055":null}}


id: PBO:0086103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for antifungal drug ciclopirox olamine resistance; not related to the subtelomerically-encoded COS family; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0086103"}


id: PBO:0045096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLX6 antisense RNA 1","termid":"PBO:0045096"}


id: PBO:0079943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USH2A antisense RNA 2","termid":"PBO:0079943"}


id: PBO:0034493
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-split_kinetochore_during_meiosis_I","termid":"PBO:0034493"}


id: PBO:0057596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 933","termid":"PBO:0057596"}


id: PBO:0047436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FCF1 pseudogene 7","termid":"PBO:0047436"}


id: GO:1990407
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to calcitonin gene-related peptide (CGRP).","definition_xrefs":["GOC:bhm","PMID:10882736"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcitonin family binding","termid":"GO:0097644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"calcitonin gene-related peptide binding","synonyms":[{"name":"CGRP polypeptide binding","type":"exact"},{"name":"calcitonin-gene-related peptide binding","type":"exact"},{"name":"calcitonin-gene-related polypeptide binding","type":"exact"}],"termid":"GO:1990407"}


id: PBO:0059076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"molybdenum cofactor synthesis 3 pseudogene 2","termid":"PBO:0059076"}


id: MONDO:0002201
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that arises from the vulva and is characterized by the presence of nests of monomorphic basaloid cells forming small cysts that contain keratin.","definition_xrefs":["NCIT:C40314"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vulvar benign neoplasm","termid":"MONDO:0000643"},{"relation_name":"is_a","term_name":"trichoblastoma","termid":"MONDO:0020593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"vulvar trichoepithelioma","secondary_identifiers":["DOID:2080","UMLS:C1520100","MEDGEN:274418"],"synonyms":[{"name":"mammalian vulva trichoblastoma","type":"exact"},{"name":"trichoblastoma of mammalian vulva","type":"exact"},{"name":"vulvar trichoblastoma","type":"exact"},{"name":"vulvar trichoepithelioma","type":"exact"}],"termid":"MONDO:0002201","xrefs":{"Monarch":{"xref_id":"0002201"}}}


id: PBO:0000178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S3a","termid":"PBO:0000178"}


id: PBO:0042633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 8 pseudogene","termid":"PBO:0042633"}


id: FYPO:0001825
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the export of sodium ions out of a cell occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal sodium export","termid":"FYPO:0001721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased sodium export","synonyms":[{"name":"increased cellular sodium export","type":"exact"},{"name":"increased sodium export during mitotic cell cycle","type":"related"},{"name":"increased sodium export during vegetative growth","type":"exact"},{"name":"increased sodium export from cell","type":"exact"},{"name":"increased sodium ion export","type":"exact"}],"termid":"FYPO:0001825"}


id: PBO:0070794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 24","termid":"PBO:0070794"}


id: MONDO:0040653
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive form of ocular albinism (disease).","definition_xrefs":["MONDO:patterns/autosomal_recessive"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"ocular albinism","termid":"MONDO:0017304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005066"],"is_obsolete":false,"name":"autosomal recessive ocular albinism","secondary_identifiers":["SCTID:78921008","MEDGEN:541337","ICD10CM:E70.311","UMLS:C0268503"],"synonyms":[{"name":"AROA","type":"related"},{"name":"autosomal recessive ocular albinism","type":"exact"},{"name":"autosomal recessive ocular albinism (disease)","type":"exact"},{"name":"ocular albinism (disease), autosomal recessive","type":"exact"}],"termid":"MONDO:0040653","xrefs":{"Monarch":{"xref_id":"0040653"}}}


id: PBO:0072928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small Cajal body-specific RNA 9","termid":"PBO:0072928"}


id: PBO:0005058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TDT malic acid transporter (predicted)","termid":"PBO:0005058"}


id: PBO:0109225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin gamma complex component 6","termid":"PBO:0109225"}


id: GO:0016139
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glycosides, compounds in which a glycosyl group is substituted into a hydroxyl, thiol or selenol group in another compound.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside metabolic process","termid":"GO:0016137"},{"relation_name":"is_a","term_name":"glycosyl compound catabolic process","termid":"GO:1901658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycoside catabolic process","secondary_identifiers":["GO:0016142"],"synonyms":[{"name":"O-glycoside breakdown","type":"exact"},{"name":"O-glycoside catabolic process","type":"exact"},{"name":"O-glycoside catabolism","type":"exact"},{"name":"O-glycoside degradation","type":"exact"},{"name":"glycoside breakdown","type":"exact"},{"name":"glycoside catabolism","type":"exact"},{"name":"glycoside degradation","type":"exact"}],"termid":"GO:0016139"}


id: GO:1903721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of I-kappaB phosphorylation.","definition_xrefs":["GOC:TermGenie","PMID:23675531","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein phosphorylation","termid":"GO:0001934"},{"relation_name":"is_a","term_name":"regulation of I-kappaB phosphorylation","termid":"GO:1903719"},{"relation_name":"positively_regulates","term_name":"I-kappaB phosphorylation","termid":"GO:0007252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of I-kappaB phosphorylation","synonyms":[{"name":"activation of I-kappaB phosphorylation","type":"narrow"},{"name":"activation of IKB phosphorylation","type":"narrow"},{"name":"activation of IkappaB phosphorylation","type":"narrow"},{"name":"activation of inhibitor of NF-kappaB phosphorylation","type":"narrow"},{"name":"activation of inhibitor of kappaB phosphorylation","type":"narrow"},{"name":"positive regulation of IKB phosphorylation","type":"exact"},{"name":"positive regulation of IkappaB phosphorylation","type":"exact"},{"name":"positive regulation of inhibitor of NF-kappaB phosphorylation","type":"exact"},{"name":"positive regulation of inhibitor of kappaB phosphorylation","type":"exact"},{"name":"up regulation of I-kappaB phosphorylation","type":"exact"},{"name":"up regulation of IKB phosphorylation","type":"exact"},{"name":"up regulation of IkappaB phosphorylation","type":"exact"},{"name":"up regulation of inhibitor of NF-kappaB phosphorylation","type":"exact"},{"name":"up regulation of inhibitor of kappaB phosphorylation","type":"exact"},{"name":"up-regulation of I-kappaB phosphorylation","type":"exact"},{"name":"up-regulation of IKB phosphorylation","type":"exact"},{"name":"up-regulation of IkappaB phosphorylation","type":"exact"},{"name":"up-regulation of inhibitor of NF-kappaB phosphorylation","type":"exact"},{"name":"up-regulation of inhibitor of kappaB phosphorylation","type":"exact"},{"name":"upregulation of I-kappaB phosphorylation","type":"exact"},{"name":"upregulation of IKB phosphorylation","type":"exact"},{"name":"upregulation of IkappaB phosphorylation","type":"exact"},{"name":"upregulation of inhibitor of NF-kappaB phosphorylation","type":"exact"},{"name":"upregulation of inhibitor of kappaB phosphorylation","type":"exact"}],"termid":"GO:1903721"}


id: PBO:0002747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fusion cytochrome c oxidase assembly protein Cox1102, mitochondrial ribosomal protein Rsm2202 (predicted)","termid":"PBO:0002747"}


id: PBO:0071480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 21","termid":"PBO:0071480"}


id: MONDO:0017919
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A spectrum of genitourinary malformations ranging in severity from epispadias (E) and classical bladder exstrophy (CEB) to exstrophy of the cloaca (EC) as the most severe form. Depending on severity, the EEC may involve the urinary system, the musculoskeletal system, the pelvis, the pelvic floor, the abdominal wall, the genitalia and sometimes the spine and the anus.","definition_xrefs":["Orphanet:322"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete non-syndromic diaphragmatic or abdominal wall malformation (obsolete MONDO:0015215)","termid":"MONDO:0015215"},{"relation_name":"excluded_subClassOf","term_name":"obsolete non-syndromic urogenital tract malformation of male and female (obsolete MONDO:0015934)","termid":"MONDO:0015934"},{"relation_name":"excluded_subClassOf","term_name":"congenital anomaly of kidney and urinary tract","termid":"MONDO:0019719"},{"relation_name":"excluded_subClassOf","term_name":"obsolete non-syndromic renal or urinary tract malformation (obsolete MONDO:0019720)","termid":"MONDO:0019720"},{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"},{"relation_name":"is_a","term_name":"urogenital tract malformation","termid":"MONDO:0019356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"exstrophy-epispadias complex","secondary_identifiers":["GARD:2207","NCIT:C99142","MEDGEN:338020","UMLS:C1850321","OMIM:258040","DOID:0080173"],"synonyms":[{"name":"BEEC","type":"narrow"},{"name":"EEC","type":"exact"},{"name":"OEIS complex","type":"exact"},{"name":"OEIS syndrome","type":"exact"},{"name":"bladder exstrophy-epispadias-cloacal extrophy complex","type":"narrow"}],"termid":"MONDO:0017919","xrefs":{"Monarch":{"xref_id":"0017919"}}}


id: PBO:0109812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protoporphyrinogen IX import factor, TMEM14 family","termid":"PBO:0109812"}


id: MONDO:0023054
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Klumpke paralysis is a type of brachial palsy in newborns. Signs and symptoms include weakness and loss of movement of the arm and hand. Some babies experience drooping of the eyelid on the opposite side of the face as well. This symptom may also be referred to as Horner syndrome. Klumpke paralysis is caused by an injury to the nerves of the brachial plexus which may result from a difficult delivery. This injury can cause a stretching (neuropraxia), tearing (called avulsion when the tear is at the spine, and rupture when it is not), or scarring (neuroma) of the brachial plexus nerves. Most infants with Klumpke paralysis have the more mild form of injury (neuropraxia) and often recover within 6 months.","definition_xrefs":["GARD:0003123"],"direct_ancestors":[{"relation_name":"is_a","term_name":"palsy","termid":"MONDO:0006496"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"klumpke's paralysis","secondary_identifiers":["NCIT:C116724","UMLS:C0270898","SCTID:83886009","GARD:3123","MEDGEN:124376"],"synonyms":[{"name":"Dejerine Klumpke Palsy","type":"related"},{"name":"Dejerine-Klumpke Palsy","type":"related"},{"name":"Dejerine-Klumpke palsy","type":"related"},{"name":"Klumpke Palsy","type":"related"},{"name":"Klumpke Paralysis","type":"related"},{"name":"Klumpke paralysis","type":"related"},{"name":"Klumpke's Palsy","type":"related"},{"name":"Klumpke's palsy","type":"related"},{"name":"Klumpke's paralysis","type":"related"},{"name":"Klumpke-DC)jerine brachial plexus injury","type":"related"},{"name":"Klumpke-DC)jerine paralysis","type":"related"},{"name":"Klumpke-Dejerine paralysis","type":"related"},{"name":"Klumpkes Palsy","type":"related"},{"name":"Lower Brachial Plexus Palsy","type":"related"},{"name":"Lower brachial plexus palsy","type":"related"},{"name":"Palsy, Dejerine-Klumpke","type":"related"},{"name":"Palsy, Klumpke's","type":"related"},{"name":"Paralysis of the Lower Brachial Plexus","type":"related"},{"name":"Paralysis, Klumpke","type":"related"},{"name":"klumpke paralysis","type":"related"},{"name":"klumpke's palsy","type":"related"},{"name":"klumpke's paralysis","type":"exact"},{"name":"klumpke-dC)jerine brachial plexus injury","type":"related"},{"name":"klumpke-dC)jerine paralysis","type":"exact"},{"name":"klumpke-dejerine paralysis","type":"related"}],"termid":"MONDO:0023054","xrefs":{"Monarch":{"xref_id":"0023054"}}}


id: GO:0033702
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (1R,5S)-carveol + NAD+ = (S)-carvone + H+ + NADH.","definition_xrefs":["EC:1.1.1.275","RHEA:14825"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"(+)-trans-carveol dehydrogenase activity","secondary_identifiers":["MetaCyc:RXN-9397","KEGG_REACTION:R06117"],"synonyms":[{"name":"(+)-trans-carveol:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0033702"}


id: GO:0048891
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a lateral line ganglion neuron.","definition_xrefs":["PMID:15018940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral nervous system neuron differentiation","termid":"GO:0048934"},{"relation_name":"part_of","term_name":"lateral line ganglion development","termid":"GO:0048890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral line ganglion neuron differentiation","synonyms":[{"name":"gLL neuron differentiation","type":"exact"}],"termid":"GO:0048891"}


id: PBO:0044877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENN domain containing 5B","termid":"PBO:0044877"}


id: MONDO:0004334
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A low or intermediate grade well differentiated tumor with neuroendocrine differentiation that arises from the pancreas. It is characterized by the absence of a hormone-related clinical syndrome.","definition_xrefs":["NCIT:C45837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pancreatic neuroendocrine tumor","termid":"MONDO:0019954"},{"relation_name":"is_a","term_name":"non-functioning endocrine neoplasm","termid":"MONDO:0021119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"non-functional pancreatic neuroendocrine tumor","secondary_identifiers":["Orphanet:506075","UMLS:C1334977","DOID:7698","MEDGEN:277416","MESH:C536126","ICDO:8150/3","GARD:22054"],"synonyms":[{"name":"inactive pancreatic endocrine tumor","type":"exact"},{"name":"inactive pancreatic endocrine tumour","type":"exact"},{"name":"non functioning pancreatic endocrine tumor","type":"related"},{"name":"non functioning pancreatic endocrine tumour","type":"related"},{"name":"non-functional pancreatic neuroendocrine tumor","type":"exact"},{"name":"non-functioning EPTs","type":"related"},{"name":"non-functioning PNET","type":"exact"},{"name":"non-functioning endocrine pancreatic tumors","type":"related"},{"name":"non-functioning endocrine pancreatic tumours","type":"related"},{"name":"non-functioning neuroendocrine tumor of pancreas","type":"related"},{"name":"non-functioning neuroendocrine tumour of pancreas","type":"related"},{"name":"non-functioning pancreatic NET","type":"exact"},{"name":"non-functioning pancreatic endocrine tumor","type":"exact"},{"name":"non-functioning pancreatic endocrine tumour","type":"exact"},{"name":"non-functioning pancreatic neuroendocrine tumor","type":"exact"},{"name":"non-functioning pancreatic neuroendocrine tumour","type":"exact"},{"name":"non-functioning well differentiated pancreatic endocrine tumor","type":"exact"},{"name":"non-functioning well differentiated pancreatic endocrine tumour","type":"exact"},{"name":"non-functioning well-differentiated NEN of pancreas","type":"exact"},{"name":"non-functioning well-differentiated neuroendocrine neoplasm of pancreas","type":"exact"},{"name":"non-functioning well-differentiated pancreatic NEN","type":"exact"},{"name":"non-functioning well-differentiated pancreatic neuroendocrine neoplasm","type":"exact"},{"name":"non-syndromic pancreatic NET","type":"exact"},{"name":"non-syndromic pancreatic neuroendocrine tumor","type":"exact"},{"name":"non-syndromic pancreatic neuroendocrine tumour","type":"exact"},{"name":"nonfunctional pancreatic NET","type":"exact"},{"name":"nonfunctional pancreatic neuroendocrine tumor","type":"exact"},{"name":"nonfunctional pancreatic neuroendocrine tumour","type":"exact"},{"name":"nonsyndromic pancreatic endocrine tumor","type":"exact"},{"name":"nonsyndromic pancreatic endocrine tumour","type":"exact"},{"name":"nonsyndromic pancreatic neuroendocrine tumor","type":"exact"},{"name":"nonsyndromic pancreatic neuroendocrine tumour","type":"exact"}],"termid":"MONDO:0004334","xrefs":{"Monarch":{"xref_id":"0004334"}}}


id: RO:0000056
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"a relation between a continuant and a process, in which the continuant is somehow involved in the process","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"participates_in","termid":"RO:0000056"}


id: GO:0050569
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycolaldehyde + H2O + NAD+ = glycolate + 2 H+ + NADH.","definition_xrefs":["RHEA:20001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase (NAD+) activity","termid":"GO:0004029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"glycolaldehyde dehydrogenase (NAD+) activity","secondary_identifiers":["KEGG_REACTION:R01333","MetaCyc:GLYCOLALD-DEHYDROG-RXN","EC:1.2.1.21"],"synonyms":[{"name":"glycol aldehyde dehydrogenase activity","type":"related"},{"name":"glycolaldehyde:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0050569"}


id: FYECO:0000303
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which menadione was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ menadione","termid":"FYECO:0000303"}


id: PBO:0063781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger protein 6","termid":"PBO:0063781"}


id: PATO:0001603
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A life span which is relatively high.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"life span","termid":"PATO:0000050"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased life span","synonyms":[{"name":"high life span","type":"exact"}],"termid":"PATO:0001603"}


id: GO:0106001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Uptake of hexoses, notably D-glucose, fructose, and galactose, into the blood by absorption from the small intestine.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal absorption","termid":"GO:0050892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intestinal hexose absorption","secondary_identifiers":["Reactome:R-HSA-8981373"],"termid":"GO:0106001"}


id: PBO:0015675
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FiZzy Related","termid":"PBO:0015675"}


id: PBO:0089043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial [2Fe-2S] cluster assembly and transfer glutaredoxin Grx5","termid":"PBO:0089043"}


id: MONDO:0022715
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Chiari malformation","termid":"MONDO:0000115"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chiari malformation type 3","secondary_identifiers":["MEDGEN:148202","UMLS:C0750931","SCTID:253186001"],"synonyms":[{"name":"Arnold Chiari malformation type III","type":"related"},{"name":"Chiari malformation type III","type":"related"},{"name":"Chiari type III malformation","type":"related"}],"termid":"MONDO:0022715","xrefs":{"Monarch":{"xref_id":"0022715"}}}


id: MONDO:0018872
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute megakaryoblastic leukemia (AMKL) is a form of acute myeloid leukemia (AML) that occurs predominantly in childhood and particularly in children with Down syndrome (DS-AMKL). Nonspecific symptoms may be irritability, weakness, and dizziness while specific symptoms include pallor, fever, mucocutaneous bleeding, hepatosplenomegaly, neurological manifestations and rarely lymphadenopathy. Acute panmyelosis with myelofibrosis may also be associated with AMKL. In contrast to DS-AMKL (around 80 % survival), non-DS-AMKL is an AML subgroup associated with poor prognosis.","definition_xrefs":["Orphanet:518"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"bilineal acute myeloid leukemia","termid":"MONDO:0011118"},{"relation_name":"is_a","term_name":"acute myeloid leukemia by FAB classification","termid":"MONDO:0015667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992","MONDO:0005046"],"is_obsolete":false,"name":"acute megakaryoblastic leukemia","secondary_identifiers":["SCTID:277602003","DOID:8761","ICDO:9910/3","GARD:524","ICD9:207.2","MedDRA:10060556","Wikipedia:Acute_megakaryoblastic_leukemia","MEDGEN:44124","icd11.foundation:2057381869","MESH:D007947","ICD10CM:C94.2","EFO:0003025","NCIT:C3170","ONCOTREE:AMKL","UMLS:C0023462","NANDO:2200011"],"synonyms":[{"name":"AMKL","type":"exact"},{"name":"AML M7","type":"exact"},{"name":"FAB M7","type":"exact"},{"name":"acute M7 myeloid leukaemia","type":"exact"},{"name":"acute M7 myeloid leukemia","type":"exact"},{"name":"acute megakaryoblastic leukaemia (FAB type M7)","type":"exact"},{"name":"acute megakaryoblastic leukemia","type":"exact"},{"name":"acute megakaryoblastic leukemia (FAB type M7)","type":"exact"},{"name":"acute megakaryoblastic leukemia, FAB M7","type":"exact"},{"name":"acute megakaryocytic leukaemia","type":"exact"},{"name":"acute megakaryocytic leukemia","type":"exact"},{"name":"acute megakaryocytic leukemias","type":"exact"},{"name":"acute myeloblastic leukaemia type 7","type":"related"},{"name":"acute myeloblastic leukemia type 7","type":"related"},{"name":"acute myeloid leukaemia M7","type":"exact"},{"name":"acute myeloid leukemia M7","type":"exact"},{"name":"leukemia, megakaryocytic, malignant","type":"exact"},{"name":"megakaryocytic leukaemia","type":"related"},{"name":"megakaryocytic leukemia","type":"related"},{"name":"megakaryocytic myelosis","type":"exact"},{"name":"thrombocytic leukaemia","type":"exact"},{"name":"thrombocytic leukemia","type":"exact"}],"termid":"MONDO:0018872","xrefs":{"Monarch":{"xref_id":"0018872"}}}


id: GO:0140743
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the synthesis of a lncRNA.","definition_xrefs":["PMID:33767452","PMID:33913806"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated transcription","termid":"GO:0006355"},{"relation_name":"regulates","term_name":"lncRNA transcription","termid":"GO:0140742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"}],"interesting_parent_ids":["GO:0008150","GO:0006351","GO:0006355","GO:0010467"],"is_obsolete":false,"name":"regulation of lncRNA transcription","termid":"GO:0140743"}


id: PBO:0029495
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_meiotic_cell_cycle_phase","termid":"PBO:0029495"}


id: PBO:0067971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 273","termid":"PBO:0067971"}


id: PBO:0005007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rad16 homolog Rhp16","termid":"PBO:0005007"}


id: PBO:0080608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 45","termid":"PBO:0080608"}


id: MONDO:0005533
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Particular variety of ulcerative colitis where only the left half of the colon is inflamed.","definition_xrefs":["EFO:0005623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ulcerative colitis","termid":"MONDO:0005101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"distal colitis","secondary_identifiers":["NANDO:1200451","ICD9:558.9","MEDGEN:678582","SCTID:373639002","UMLS:C0860168"],"synonyms":[{"name":"inflammation of left colon","type":"exact"},{"name":"left colon inflammation","type":"exact"}],"termid":"MONDO:0005533","xrefs":{"Monarch":{"xref_id":"0005533"}}}


id: GO:0021794
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the thalamus changes over time, from its initial formation to its mature state.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:jid","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"diencephalon development","termid":"GO:0021536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thalamus development","termid":"GO:0021794"}


id: GO:0034382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a chylomicron remnant is removed from the blood via receptor-mediated endocytosis into liver cells and its constituent parts degraded.","definition_xrefs":["GOC:mah","GOC:pde","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triglyceride-rich lipoprotein particle clearance","termid":"GO:0071830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chylomicron remnant clearance","secondary_identifiers":["Reactome:R-HSA-8964026"],"termid":"GO:0034382"}


id: GO:0042385
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A myosin complex containing a class III myosin heavy chain and associated light chains; myosin III is monomeric myosin that serves as a link between the cytoskeleton and the signaling complex involved in phototransduction, and differs from all other myosins in having an N-terminal kinase domain.","definition_xrefs":["PMID:33718386","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unconventional myosin complex","termid":"GO:0016461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015629"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0015629"],"is_obsolete":false,"name":"myosin III complex","termid":"GO:0042385"}


id: GO:0048078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of establishment of a pattern of pigment in the compound eye.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of eye pigmentation","termid":"GO:0048075"},{"relation_name":"is_a","term_name":"regulation of compound eye pigmentation","termid":"GO:0048076"},{"relation_name":"positively_regulates","term_name":"compound eye pigmentation","termid":"GO:0048072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of compound eye pigmentation","synonyms":[{"name":"activation of eye pigmentation","type":"broad"},{"name":"positive regulation of eye pigmentation","type":"broad"},{"name":"stimulation of eye pigmentation","type":"broad"},{"name":"up regulation of eye pigmentation","type":"broad"},{"name":"up-regulation of eye pigmentation","type":"broad"},{"name":"upregulation of eye pigmentation","type":"broad"}],"termid":"GO:0048078"}


id: PBO:0028190
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_branched,_elongated,_multiseptate_vegetative_cell","termid":"PBO:0028190"}


id: GO:0014899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process, occurring in the heart, in which a decrease in cell mass and then in heart size occurs due to shrinking of the individual cells. The shrinkage is caused by protein degradation.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle adaptation","termid":"GO:0014887"},{"relation_name":"is_a","term_name":"striated muscle atrophy","termid":"GO:0014891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac muscle atrophy","termid":"GO:0014899"}


id: FYPO:0005512
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the meiosis I spindle assembly checkpoint is activated more frequently than normal, typically under conditions that do not cause checkpoint activation in wild-type cells. The meiosis I spindle assembly checkpoint normally delays the metaphase/anaphase transition of the first meiotic nuclear division until the spindle is correctly assembled and chromosomes are attached to the spindle.","definition_xrefs":["PMID:26483559","PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic cell cycle checkpoint phenotype","termid":"FYPO:0005511"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"increased activation of meiosis I spindle assembly checkpoint","synonyms":[{"name":"increased activation of first meiotic nuclear division spindle assembly checkpoint","type":"exact"},{"name":"increased activation of meiosis I cell cycle spindle assembly checkpoint","type":"exact"},{"name":"increased activation of spindle assembly checkpoint during meiosis I","type":"exact"},{"name":"increased meiosis I spindle assembly checkpoint activation","type":"exact"}],"termid":"FYPO:0005512"}


id: PATO:0000803
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000803 tactile response value (obsolete PATO:0000803)","termid":"PATO:0000803"}


id: PBO:0085781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of the mitochondrial outer surface; links the Arp2/3 complex with the mitochondria during anterograde mitochondrial movement; also binds to and promotes degradation of mRNAs for select nuclear-encoded mitochondrial proteins; translationally represses oxidative stress-linked genes; regulates CoQ biosynthesis","termid":"PBO:0085781"}


id: GO:0052545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which callose is transported to, and/or maintained in, a specific location. Callose is a linear 1,3-beta-d-glucan formed from UDP-glucose and is found in certain plant cell walls.","definition_xrefs":["GOC:mtg_pamgo_17jul06","PMID:18397379"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide localization","termid":"GO:0033037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"callose localization","synonyms":[{"name":"callose localisation","type":"exact"}],"termid":"GO:0052545"}


id: GO:0046135
data:
  {"annotated_genes":["SJAG_01673","SJAG_00957"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92465],"is_not":false,"summary":null,"term":"GO:0046135"},{"annotations":[91010],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006216"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of one of a family of organic molecules consisting of a pyrimidine base covalently bonded to a sugar ribose (a ribonucleoside) or deoxyribose (a deoxyribonucleoside).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside metabolic process","termid":"GO:0006213"},{"relation_name":"is_a","term_name":"nucleoside catabolic process","termid":"GO:0009164"},{"relation_name":"is_a","term_name":"pyrimidine-containing compound catabolic process","termid":"GO:0072529"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00957":null,"SJAG_01673":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"pyrimidine nucleoside catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-73621"],"synonyms":[{"name":"pyrimidine nucleoside breakdown","type":"exact"},{"name":"pyrimidine nucleoside catabolism","type":"exact"},{"name":"pyrimidine nucleoside degradation","type":"exact"}],"termid":"GO:0046135","terms_by_termid":{"GO:0006216":null,"GO:0046135":null}}


id: PBO:0082511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of the DNA polymerase I alpha-primase complex; required for the initiation of DNA replication during mitotic DNA synthesis and premeiotic DNA synthesis","termid":"PBO:0082511"}


id: GO:1905099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of guanyl-nucleotide exchange factor activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:20484009"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of guanyl-nucleotide exchange factor activity (obsolete GO:1905099)","synonyms":[{"name":"activation of GDP-dissociation stimulator activity","type":"narrow"},{"name":"activation of GDS","type":"narrow"},{"name":"activation of GEF","type":"narrow"},{"name":"activation of GNRP","type":"narrow"},{"name":"activation of guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"activation of guanyl-nucleotide release factor activity","type":"narrow"},{"name":"activation of guanyl-nucleotide releasing factor","type":"narrow"},{"name":"positive regulation of GDP-dissociation stimulator activity","type":"exact"},{"name":"positive regulation of GDS","type":"exact"},{"name":"positive regulation of GEF","type":"exact"},{"name":"positive regulation of GNRP","type":"narrow"},{"name":"positive regulation of guanyl-nucleotide release factor activity","type":"exact"},{"name":"positive regulation of guanyl-nucleotide releasing factor","type":"exact"},{"name":"up regulation of GDP-dissociation stimulator activity","type":"exact"},{"name":"up regulation of GDS","type":"exact"},{"name":"up regulation of GEF","type":"exact"},{"name":"up regulation of GNRP","type":"narrow"},{"name":"up regulation of guanyl-nucleotide exchange factor activity","type":"exact"},{"name":"up regulation of guanyl-nucleotide release factor activity","type":"exact"},{"name":"up regulation of guanyl-nucleotide releasing factor","type":"exact"},{"name":"up-regulation of GDP-dissociation stimulator activity","type":"exact"},{"name":"up-regulation of GDS","type":"exact"},{"name":"up-regulation of GEF","type":"exact"},{"name":"up-regulation of GNRP","type":"narrow"},{"name":"up-regulation of guanyl-nucleotide exchange factor activity","type":"exact"},{"name":"up-regulation of guanyl-nucleotide release factor activity","type":"exact"},{"name":"up-regulation of guanyl-nucleotide releasing factor","type":"exact"},{"name":"upregulation of GDP-dissociation stimulator activity","type":"exact"},{"name":"upregulation of GDS","type":"exact"},{"name":"upregulation of GEF","type":"exact"},{"name":"upregulation of GNRP","type":"narrow"},{"name":"upregulation of guanyl-nucleotide exchange factor activity","type":"exact"},{"name":"upregulation of guanyl-nucleotide release factor activity","type":"exact"},{"name":"upregulation of guanyl-nucleotide releasing factor","type":"exact"}],"termid":"GO:1905099"}


id: GO:0071982
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The dormancy process that results an organism remaining in diapause. Diapause is a neurohormonally mediated, dynamic state of low metabolic activity. Associated characteristics of this form of dormancy include reduced morphogenesis, increased resistance to environmental extremes, and altered or reduced behavioral activity. Full expression develops in a species-specific manner, usually in response to a number of environmental stimuli that precede unfavorable conditions. Once diapause has begun, metabolic activity is suppressed even if conditions favorable for development prevail. Once initiated, only certain stimuli are capable of releasing the organism from this state, and this characteristic is essential in distinguishing diapause from hibernation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dormancy process","termid":"GO:0022611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of diapause","termid":"GO:0071982"}


id: PBO:0043671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"corin, serine peptidase","termid":"PBO:0043671"}


id: PBO:0040799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic helix-loop-helix family member e22","termid":"PBO:0040799"}


id: MONDO:0019610
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Zollinger-Ellison syndrome (ZES) is characterized by severe peptic disease (ulcers/esophageal disease) caused by hypergastrinemia secondary to a gastrinoma resulting in increased gastric acid secretion.","definition_xrefs":["Orphanet:913"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"neoplasm","termid":"MONDO:0005070"},{"relation_name":"is_a","term_name":"gastrin secretion abnormality","termid":"MONDO:0001770"},{"relation_name":"is_a","term_name":"neoplastic syndrome","termid":"MONDO:0021058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"Zollinger-Ellison syndrome","secondary_identifiers":["EFO:0007549","NCIT:C3453","SCTID:53132006","UMLS:C0043515","GARD:7918","MedDRA:10017852","SCTID:302824004","DOID:0050782","NORD:1877","MEDGEN:53129","ICD10CM:C25.4","MESH:D015043","icd11.foundation:375645550","MESH:D015408","HP:0002044"],"synonyms":[{"name":"Z E syndrome","type":"related"},{"name":"Z-E syndrome","type":"related"},{"name":"ZES","type":"related"},{"name":"Zollinger Ellison syndrome","type":"exact"},{"name":"Zollinger-Ellison syndrome","type":"exact"},{"name":"Zollinger-Ellison syndrome (disease)","type":"exact"},{"name":"gastrinoma","type":"related"},{"name":"pancreatic ulcerogenic tumor syndrome","type":"related"},{"name":"pancreatic ulcerogenic tumour syndrome","type":"related"}],"termid":"MONDO:0019610","xrefs":{"Monarch":{"xref_id":"0019610"}}}


id: PBO:0027978
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H3-K4_dimethylation","termid":"PBO:0027978"}


id: FYPO:0003900
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a triphosphatase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal triphosphatase activity","termid":"FYPO:0003899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000654","FYPO:0000661","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"decreased triphosphatase activity","synonyms":[{"name":"reduced triphosphatase activity","type":"exact"}],"termid":"FYPO:0003900"}


id: PBO:0058199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4492","termid":"PBO:0058199"}


id: GO:0010299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that reduces or removes the toxicity of cobalt ion (Co2+). These include transport of cobalt away from sensitive areas and to compartments or complexes whose purpose is sequestration of cobalt ion.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detoxification of inorganic compound","termid":"GO:0061687"},{"relation_name":"part_of","term_name":"response to cobalt ion","termid":"GO:0032025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0098754"],"is_obsolete":false,"name":"detoxification of cobalt ion","termid":"GO:0010299"}


id: GO:0033075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of isoquinoline alkaloids, alkaloid compounds that contain bicyclic N-containing aromatic rings and are derived from a 3,4-dihydroxytyramine (dopamine) precursor that undergoes a Schiff base addition with aldehydes of different origin.","definition_xrefs":["PMID:26503307","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkaloid biosynthetic process","termid":"GO:0009821"},{"relation_name":"is_a","term_name":"isoquinoline alkaloid metabolic process","termid":"GO:0033076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"isoquinoline alkaloid biosynthetic process","synonyms":[{"name":"ipecac alkaloid biosynthesis","type":"related"},{"name":"isoquinoline alkaloid anabolism","type":"exact"},{"name":"isoquinoline alkaloid biosynthesis","type":"exact"},{"name":"isoquinoline alkaloid formation","type":"exact"},{"name":"isoquinoline alkaloid synthesis","type":"exact"}],"termid":"GO:0033075"}


id: GO:0033455
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a GCA codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003723","GO:0003674","GO:0060090","GO:0005488"],"is_obsolete":false,"name":"GCA codon-amino acid adaptor activity","synonyms":[{"name":"alanine tRNA","type":"related"}],"termid":"GO:0033455"}


