# terms

id: PBO:0036453
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Microvillus inclusion disease","termid":"PBO:0036453"}


id: PATO:0000392
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000392 limited (obsolete PATO:0000392)","termid":"PATO:0000392"}


id: MONDO:0006878
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with bacteria of the family moraxellaceae.","definition_xrefs":["MESH:D045828"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gram-negative bacterial infections","termid":"MONDO:0021678"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Moraxellaceae infectious disease","secondary_identifiers":["EFO:1001072"],"synonyms":[{"name":"Moraxella infection","type":"related"},{"name":"Moraxella infections","type":"related"},{"name":"Moraxellaceae caused disease or disorder","type":"exact"},{"name":"Moraxellaceae disease or disorder","type":"exact"},{"name":"Moraxellaceae infection","type":"related"},{"name":"Psychobacter infection","type":"related"},{"name":"Psychobacter infections","type":"related"},{"name":"infection, Moraxella","type":"related"},{"name":"infection, Moraxellaceae","type":"related"},{"name":"infection, Psychobacter","type":"related"},{"name":"infections, Moraxella","type":"related"},{"name":"infections, Moraxellaceae","type":"related"},{"name":"infections, Psychobacter","type":"related"}],"termid":"MONDO:0006878","xrefs":{"Monarch":{"xref_id":"0006878"}}}


id: GO:0008454
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + (N-acetyl-beta-D-glucosaminyl-1,2)-alpha-D-mannosyl-1,3-(beta-N-acetyl-D-glucosaminyl-1,2-alpha-D-mannosyl-1,6)-beta-D-mannosyl-R = UDP + N-acetyl-beta-D-glucosaminyl-1,4-(N-acetyl-D-glucosaminyl-1,2)-alpha-D-mannosyl-1,3-(beta-N-acetyl-D-glucosaminyl-1,2-alpha-D-mannosyl-1,6)-beta-D-mannosyl-R.","definition_xrefs":["EC:2.4.1.145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a glycoprotein","termid":"GO:0140103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0016740","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"alpha-1,3-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity","secondary_identifiers":["Reactome:R-HSA-9696980","MetaCyc:2.4.1.145-RXN","Reactome:R-HSA-975903","RHEA:16057"],"synonyms":[{"name":"GnTIV activity","type":"related"},{"name":"N-acetylglucosaminyltransferase IV activity","type":"related"},{"name":"N-glycosyl-oligosaccharide-glycoprotein N-acetylglucosaminyltransferase IV activity","type":"related"},{"name":"UDP-N-acetyl-D-glucosamine:3-[2-(N-acetyl-beta-D-glucosaminyl)-alpha-D-mannosyl]-glycoprotein 4-beta-N-acetyl-D-glucosaminyltransferase activity","type":"related"},{"name":"alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase activity","type":"related"},{"name":"alpha-1,3-mannosylglycoprotein beta-1,4-N-acetylglucosaminyltransferase activity","type":"exact"},{"name":"beta-acetylglucosaminyltransferase IV activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine-glycopeptide beta-4-acetylglucosaminyltransferase IV activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine-glycopeptide beta4-acetylglucosaminyltransferase IV","type":"related"}],"termid":"GO:0008454"}


id: PR:O74916
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An acetylornithine deacetylase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04163","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidase M20 domain-containing protein C757.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC757.05c","secondary_identifiers":["UniProtKB:O74916"],"synonyms":[{"name":"Spom972h-argE","type":"exact"}],"termid":"PR:O74916"}


id: MONDO:0004067
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenocarcinoma that arises from the gallbladder. It is characterized by the presence of extracellular mucin that constitutes more than fifty-percent of the tumor.","definition_xrefs":["NCIT:C5744"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucinous adenocarcinoma","termid":"MONDO:0004957"},{"relation_name":"is_a","term_name":"gallbladder adenocarcinoma","termid":"MONDO:0006215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992","MONDO:0002515"],"is_obsolete":false,"name":"gallbladder mucinous adenocarcinoma","secondary_identifiers":["DOID:6998","MEDGEN:234292","UMLS:C1333750"],"synonyms":[{"name":"colloid carcinoma of gallbladder","type":"exact"},{"name":"colloid carcinoma of the gallbladder","type":"exact"},{"name":"colloidal carcinoma of gallbladder","type":"exact"},{"name":"colloidal carcinoma of the gallbladder","type":"exact"},{"name":"gall bladder mucinous adenocarcinoma","type":"exact"},{"name":"gallbladder colloid carcinoma","type":"exact"},{"name":"gallbladder colloidal carcinoma","type":"exact"},{"name":"gallbladder mucinous adenocarcinoma","type":"exact"},{"name":"gallbladder mucinous carcinoma","type":"related"},{"name":"mucinous carcinoma of gallbladder","type":"exact"},{"name":"mucinous carcinoma of the gallbladder","type":"exact"}],"termid":"MONDO:0004067","xrefs":{"Monarch":{"xref_id":"0004067"}}}


id: GO:2000160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of planar cell polarity pathway involved in heart morphogenesis.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of planar cell polarity pathway involved in heart morphogenesis (obsolete GO:2000160)","termid":"GO:2000160"}


id: MONDO:0021367
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The phase of chronic myeloid leukemia following the chronic phase (leukemia, myeloid, chronic-phase), where there are increased systemic symptoms, worsening cytopenias, and refractory leukocytosis.","definition_xrefs":["MESH:D015465"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic myelogenous leukemia, BCR-ABL1 positive","termid":"MONDO:0011996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992","MONDO:0005046"],"is_obsolete":false,"name":"leukemia, myeloid, accelerated-phase","secondary_identifiers":["NCIT:C3173","UMLS:C0023472","MEDGEN:6059"],"synonyms":[{"name":"Accelerated Phase CML","type":"related"},{"name":"Accelerated Phase Chronic Granulocytic Leukaemia","type":"related"},{"name":"Accelerated Phase Chronic Granulocytic Leukemia","type":"related"},{"name":"Accelerated Phase Chronic Myelocytic Leukaemia","type":"related"},{"name":"Accelerated Phase Chronic Myelocytic Leukemia","type":"related"},{"name":"Accelerated Phase Chronic Myelogenous Leukaemia","type":"related"},{"name":"Accelerated Phase Chronic Myelogenous Leukemia","type":"related"},{"name":"Accelerated Phase Chronic Myelogenous Leukemia, BCR-ABL1 Positive","type":"related"},{"name":"Accelerated Phase Chronic Myeloid Leukaemia","type":"related"},{"name":"Accelerated Phase Chronic Myeloid Leukemia","type":"related"},{"name":"Accelerated phase chronic myeloid leukaemia","type":"related"},{"name":"Accelerated phase chronic myeloid leukemia","type":"related"},{"name":"Aggressive-Phase CML","type":"related"},{"name":"Aggressive-Phase Chronic Myelocytic Leukaemia","type":"related"},{"name":"Aggressive-Phase Chronic Myelocytic Leukemia","type":"related"},{"name":"Aggressive-Phase Chronic Myelogenous Leukaemia","type":"related"},{"name":"Aggressive-Phase Chronic Myelogenous Leukemia","type":"related"},{"name":"Aggressive-Phase Chronic Myeloid Leukaemia","type":"related"},{"name":"Aggressive-Phase Chronic Myeloid Leukemia","type":"related"},{"name":"CML ACCELERATED","type":"related"},{"name":"CML AGGRESSIVE","type":"related"},{"name":"Leukemia, Myelogenous, Aggressive Phase","type":"related"},{"name":"Leukemia, Myelogenous, Aggressive-Phase","type":"related"},{"name":"Leukemia, Myeloid, Accelerated Phase","type":"related"},{"name":"Leukemia, Myeloid, Accelerated-Phase","type":"related"},{"name":"Leukemia, Myeloid, Aggressive-Phase","type":"related"},{"name":"Myelogenous Leukemia, Chronic, Aggressive Phase","type":"related"},{"name":"Myelogenous Leukemia, Chronic, Aggressive-Phase","type":"related"},{"name":"Myeloid Leukemia, Chronic, Accelerated Phase","type":"related"},{"name":"Myeloid Leukemia, Chronic, Accelerated-Phase","type":"related"},{"name":"Myeloid Leukemia, Chronic, Aggressive Phase","type":"related"},{"name":"Myeloid Leukemia, Chronic, Aggressive-Phase","type":"related"}],"termid":"MONDO:0021367","xrefs":{"Monarch":{"xref_id":"0021367"}}}


id: GO:0042218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 1-aminocyclopropane-1-carboxylate, a natural product found in plant tissues. It is a key intermediate in the biosynthesis of ethylene (ethene), a fruit-ripening hormone in plants.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"1-aminocyclopropane-1-carboxylate metabolic process","termid":"GO:0018871"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid biosynthetic process","termid":"GO:0170043"},{"relation_name":"is_a","term_name":"alpha-amino acid biosynthetic process","termid":"GO:1901607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"1-aminocyclopropane-1-carboxylate biosynthetic process","synonyms":[{"name":"1-aminocyclopropane-1-carboxylate anabolism","type":"exact"},{"name":"1-aminocyclopropane-1-carboxylate biosynthesis","type":"exact"},{"name":"1-aminocyclopropane-1-carboxylate formation","type":"exact"},{"name":"1-aminocyclopropane-1-carboxylate synthesis","type":"exact"}],"termid":"GO:0042218"}


id: PBO:0073253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 5","termid":"PBO:0073253"}


id: MONDO:0001675
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete porphyria (obsolete MONDO:0001675)","termid":"MONDO:0001675","xrefs":{"Monarch":{"xref_id":"0001675"}}}


id: GO:0042025
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded organelle as it is found in the host cell in which chromosomes are housed and replicated. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host intracellular membrane-bounded organelle","termid":"GO:0033648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell nucleus","secondary_identifiers":["GO:0033649"],"termid":"GO:0042025"}


id: PBO:0055266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2693","termid":"PBO:0055266"}


id: PBO:0067498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 634, pseudogene","termid":"PBO:0067498"}


id: PBO:0078679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon TTT) 12-1","termid":"PBO:0078679"}


id: SO:0000568
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter that can allow for transcription in both directions.","definition_xrefs":["SO:ke","PMID:21601935"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter","termid":"SO:0000167"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bidirectional_promoter","synonyms":[{"name":"bidirectional promoter","type":"exact"}],"termid":"SO:0000568"}


id: MONDO:0005569
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Softening and degeneration of the CARTILAGE. Pathological processes involving the chondral tissue (CARTILAGE).","definition_xrefs":["EFO:0005802"],"gene_count":0,"genotype_count":0,"name":"obsolete cartilage disease (obsolete MONDO:0005569)","secondary_identifiers":["MESH:D002357","ICD9:733.99","SCTID:50927007","DOID:1222"],"synonyms":[{"name":"cartilage disorder","type":"exact"},{"name":"cartilage tissue disease","type":"exact"},{"name":"cartilage tissue disease or disorder","type":"exact"},{"name":"chondropathy","type":"exact"},{"name":"disease of cartilage tissue","type":"exact"},{"name":"disease or disorder of cartilage tissue","type":"exact"},{"name":"disorder of cartilage tissue","type":"exact"}],"termid":"MONDO:0005569","xrefs":{"Monarch":{"xref_id":"0005569"}}}


id: PBO:0069328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 587, pseudogene","termid":"PBO:0069328"}


id: GO:0044293
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Small dendrites that makes up a brush structure found as the terminal specialization of a dendrite of a unipolar brush cell (UBC).","definition_xrefs":["GOC:jl","NIF_Subcellular:sao28175134","NIF_Subcellular:sao295057932","PMID:8300904"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendrite terminus","termid":"GO:0044292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dendriole","termid":"GO:0044293"}


id: PBO:0074912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 83A","termid":"PBO:0074912"}


id: PBO:0080402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS33B divergent transcript","termid":"PBO:0080402"}


id: PBO:0081435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 286A","termid":"PBO:0081435"}


id: FYPO:0007656
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome occupancy is higher than normal at transcription start sites. Nucleosome occupancy measures the tendency for DNA in a given region to be packaged into nucleosomes.","definition_xrefs":["PMID:33511417","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased nucleosome occupancy","termid":"FYPO:0007655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000641"],"is_obsolete":false,"name":"increased nucleosome occupancy at transcription start site","synonyms":[{"name":"increased nucleosome occupancy at TSS","type":"exact"},{"name":"increased nucleosome occupancy at transcription start site during mitotic cell cycle","type":"related"},{"name":"increased nucleosome occupancy at transcription start site during vegetative growth","type":"exact"}],"termid":"FYPO:0007656"}


id: PBO:0056785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microfibril associated protein 2","termid":"PBO:0056785"}


id: FYPO:0007704
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the cell cortex is decreased when the cell is subject to glucose starvation.","definition_xrefs":["PMID:26443240","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to lateral cell cortex","termid":"FYPO:0007869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to lateral cell cortex during glucose starvation","synonyms":[{"name":"decreased protein localisation to lateral cell cortex during glucose starvation","type":"exact"},{"name":"decreased protein localization to cell side during glucose starvation","type":"related"},{"name":"decreased protein localization to lateral cell cortex during cellular response to glucose starvation","type":"exact"},{"name":"decreased protein localization to lateral cell cortex during glucose depletion","type":"exact"},{"name":"decreased protein localization to lateral cell cortex during glucose deprivation","type":"exact"},{"name":"decreased protein localization to lateral cortex during glucose starvation","type":"exact"},{"name":"reduced protein localization to lateral cell cortex during glucose starvation","type":"exact"}],"termid":"FYPO:0007704"}


id: MONDO:0001196
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"psychosexual disorder","termid":"MONDO:0000947"},{"relation_name":"is_a","term_name":"neurological pain disorder","termid":"MONDO:0700057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"psychologic dyspareunia","secondary_identifiers":["MEDGEN:509600","SCTID:41021005","UMLS:C0154466","MESH:D004414","DOID:11120","ICD9:302.76"],"synonyms":[{"name":"dyspareunia, psychogenic","type":"exact"},{"name":"non-organic dyspareunia","type":"exact"}],"termid":"MONDO:0001196","xrefs":{"Monarch":{"xref_id":"0001196"}}}


id: PBO:0013068
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement S. cerevisiae CDC28","termid":"PBO:0013068"}


id: GO:0060428
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of the lung epithelium from an initial condition to its mature state. This process begins with the formation of lung epithelium and ends with the mature structure. The lung epithelium is the specialized epithelium that lines the inside of the lung.","definition_xrefs":["GOC:mtg_lung","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelium development","termid":"GO:0060429"},{"relation_name":"part_of","term_name":"lung development","termid":"GO:0030324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung epithelium development","synonyms":[{"name":"pulmonary epithelium development","type":"exact"}],"termid":"GO:0060428"}


id: PBO:0074851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 38D","termid":"PBO:0074851"}


id: MONDO:0010822
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Warburg micro syndrome in which the cause of the disease is a mutation in the RAB3GAP1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Warburg micro syndrome","termid":"MONDO:0016649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0002320","MONDO:0006025"],"is_obsolete":false,"name":"Warburg micro syndrome 1","secondary_identifiers":["DOID:0110716","MEDGEN:333142","UMLS:C1838625","OMIM:600118"],"synonyms":[{"name":"RAB3GAP1 Warburg micro syndrome","type":"exact"},{"name":"WARBM1","type":"exact"},{"name":"WARBURG micro syndrome 1","type":"related"},{"name":"Warburg micro syndrome 1","type":"exact"},{"name":"Warburg micro syndrome caused by mutation in RAB3GAP1","type":"exact"},{"name":"Warburg micro syndrome type 1","type":"exact"},{"name":"micro syndrome","type":"related"},{"name":"micro syndrome 1","type":"exact"}],"termid":"MONDO:0010822","xrefs":{"Monarch":{"xref_id":"0010822"}}}


id: GO:0014736
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of muscle atrophy.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle atrophy","termid":"GO:0014735"},{"relation_name":"is_a","term_name":"negative regulation of muscle adaptation","termid":"GO:0014745"},{"relation_name":"negatively_regulates","term_name":"muscle atrophy","termid":"GO:0014889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of muscle atrophy","termid":"GO:0014736"}


id: MONDO:0021577
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mediastinal neural neoplasm","termid":"MONDO:0003098"},{"relation_name":"is_a","term_name":"mediastinal cancer","termid":"MONDO:0005843"},{"relation_name":"is_a","term_name":"peripheral nervous system cancer","termid":"MONDO:0021089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant mediastinal neural neoplasm","secondary_identifiers":["UMLS:C0349665","SCTID:278044006","MEDGEN:578863"],"synonyms":[{"name":"malignant neuroma of mediastinum","type":"exact"}],"termid":"MONDO:0021577","xrefs":{"Monarch":{"xref_id":"0021577"}}}


id: PBO:0056175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAF1 homolog, negative regulator of RNA polymerase III","termid":"PBO:0056175"}


id: GO:0006979
data:
  {"annotated_genes":["SJAG_00668","SJAG_04632","SJAG_04953","SJAG_01216","SJAG_03903","SJAG_03828","SJAG_01292","SJAG_04823","SJAG_02515","SJAG_04125","SJAG_03924","SJAG_03414","SJAG_04403","SJAG_03303","SJAG_02183","SJAG_00027","SJAG_06621","SJAG_00365","SJAG_01734","SJAG_02485","SJAG_03896","SJAG_03330","SJAG_02433","SJAG_02858","SJAG_05014","SJAG_01855","SJAG_06622","SJAG_00419","SJAG_04036","SJAG_03166","SJAG_02592","SJAG_02249","SJAG_05181","SJAG_03653","SJAG_02044","SJAG_00141","SJAG_01199","SJAG_01162","SJAG_04788","SJAG_02495","SJAG_02945","SJAG_01084","SJAG_02135","SJAG_03886","SJAG_06611","SJAG_00984","SJAG_04399","SJAG_02573","SJAG_00996","SJAG_04311"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101821,106878,97014,119234,110678,120170],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061692"},{"annotations":[75314,79299,103678,110779,110775,110777,110780,78767,78561,61119,109640,97805,80836,65184,77593,92006,99437,76585,110776,90377,93971,76946,75016,116328,110781,95372,68479,69842,92700,71985,110778,91905],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034599"},{"annotations":[93340,91618,92008],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:2000815"},{"annotations":[75953,94950,66246,101088,90794,61623,70430,91218,58471],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0019430"},{"annotations":[97076],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000302"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.","definition_xrefs":["GOC:jl","PMID:12115731"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"}],"gene_count":50,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00141":null,"SJAG_00365":null,"SJAG_00419":null,"SJAG_00668":null,"SJAG_00984":null,"SJAG_00996":null,"SJAG_01084":null,"SJAG_01162":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_01292":null,"SJAG_01734":null,"SJAG_01855":null,"SJAG_02044":null,"SJAG_02135":null,"SJAG_02183":null,"SJAG_02249":null,"SJAG_02433":null,"SJAG_02485":null,"SJAG_02495":null,"SJAG_02515":null,"SJAG_02573":null,"SJAG_02592":null,"SJAG_02858":null,"SJAG_02945":null,"SJAG_03166":null,"SJAG_03303":null,"SJAG_03330":null,"SJAG_03414":null,"SJAG_03653":null,"SJAG_03828":null,"SJAG_03886":null,"SJAG_03896":null,"SJAG_03903":null,"SJAG_03924":null,"SJAG_04036":null,"SJAG_04125":null,"SJAG_04311":null,"SJAG_04399":null,"SJAG_04403":null,"SJAG_04632":null,"SJAG_04788":null,"SJAG_04823":null,"SJAG_04953":null,"SJAG_05014":null,"SJAG_05181":null,"SJAG_06611":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to oxidative stress","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null},"termid":"GO:0006979","terms_by_termid":{"GO:0000302":null,"GO:0019430":null,"GO:0034599":null,"GO:0061692":null,"GO:2000815":null}}


id: GO:0045634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of melanocyte differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pigment cell differentiation","termid":"GO:0050932"},{"relation_name":"regulates","term_name":"melanocyte differentiation","termid":"GO:0030318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of melanocyte differentiation","synonyms":[{"name":"regulation of melanophore differentiation","type":"exact"}],"termid":"GO:0045634"}


id: PBO:0001439
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expression induced by hydrogen peroxide","termid":"PBO:0001439"}


id: GO:0045942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of phosphorus utilization.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphorus utilization","termid":"GO:0006795"},{"relation_name":"is_a","term_name":"negative regulation of phosphorus metabolic process","termid":"GO:0010563"},{"relation_name":"negatively_regulates","term_name":"phosphorus utilization","termid":"GO:0006794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of phosphorus utilization","synonyms":[{"name":"down regulation of phosphorus utilization","type":"exact"},{"name":"down-regulation of phosphorus utilization","type":"exact"},{"name":"downregulation of phosphorus utilization","type":"exact"},{"name":"inhibition of phosphorus utilization","type":"narrow"}],"termid":"GO:0045942"}


id: GO:0035250
data:
  {"annotated_genes":["SJAG_00183"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107594],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047220"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a galactose group from UDP-galactose to an acceptor molecule.","definition_xrefs":["PMID:19858195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glycosyltransferase activity","termid":"GO:0008194"},{"relation_name":"is_a","term_name":"galactosyltransferase activity","termid":"GO:0008378"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"UDP-galactosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0035250","terms_by_termid":{"GO:0047220":null}}


id: PBO:0074530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA D","termid":"PBO:0074530"}


id: FYPO:0001675
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of L-aminoadipate-semialdehyde dehydrogenase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal L-aminoadipate-semialdehyde dehydrogenase activity","termid":"FYPO:0001674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000652","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"increased L-aminoadipate-semialdehyde dehydrogenase activity","synonyms":[{"name":"increased alpha-aminoadipate reductase activity","type":"exact"}],"termid":"FYPO:0001675"}


id: PBO:0002576
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human moe1","termid":"PBO:0002576"}


id: PBO:0001519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2 domain","termid":"PBO:0001519"}


id: PBO:0084864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the small subunit; contains twin cysteine-x9-cysteine motifs; oxidized by Mia40p during import into mitochondria","termid":"PBO:0084864"}


id: GO:0002212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A behavioral response seeking to protect an organism from an a perceived external threat from a nematode or nematodes to that organism.","definition_xrefs":["PMID:14506883","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavioral defense response","termid":"GO:0002209"},{"relation_name":"is_a","term_name":"defense response to nematode","termid":"GO:0002215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"behavioral defense response to nematode","synonyms":[{"name":"behavioural defense response to nematode","type":"exact"}],"termid":"GO:0002212"}


id: PATO:0005009
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A 3-D shape inhering in a bearer by virtue of the bearer's having an entity in the form of a molar tooth.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3-D shape","termid":"PATO:0002266"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"molariform","termid":"PATO:0005009"}


id: MONDO:0100170
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing restless legs syndrome.","definition_xrefs":["MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"restless legs syndrome, susceptibility to","secondary_identifiers":["OMIMPS:102300"],"termid":"MONDO:0100170","xrefs":{"Monarch":{"xref_id":"0100170"}}}


id: GO:0102412
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate(3-) = valerena-4,7(11)-diene + diphosphoric acid.","definition_xrefs":["GOC:pz","EC:4.2.3.139"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"valerena-4,7(11)-diene synthase activity","secondary_identifiers":["MetaCyc:RXN-13769","RHEA:34467"],"termid":"GO:0102412"}


id: MONDO:0000173
data:
  {"annotated_genes":["SJAG_01491","SJAG_03188","SJAG_04053","SJAG_04316"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86979],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012248"},{"annotations":[88460,88459],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013162"},{"annotations":[87730],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014142"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy-dystroglycanopathy","termid":"MONDO:0018276"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01491":null,"SJAG_03188":null,"SJAG_04053":null,"SJAG_04316":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"muscular dystrophy-dystroglycanopathy, type C","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:609308"],"termid":"MONDO:0000173","terms_by_termid":{"MONDO:0012248":null,"MONDO:0013162":null,"MONDO:0014142":null},"xrefs":{"Monarch":{"xref_id":"0000173"}}}


id: MONDO:0858944
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A central nervous system benign neoplasm that is characterized by a dinucleotide mutation at codon 385 of the PDGFR gene. It usually occurs in the septum pellucidum but has also been described in the corpus callosum and periventricular white matter of the lateral ventricle. It is composed of oligodendrocyte-like cells in a prominent myxoid stroma.","definition_xrefs":["DOID:0081285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system organ benign neoplasm","termid":"MONDO:0000628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myxoid glioneuronal tumor","secondary_identifiers":["NCIT:C179229","UMLS:C5555545","MEDGEN:1791986"],"termid":"MONDO:0858944","xrefs":{"Monarch":{"xref_id":"0858944"}}}


id: MONDO:0003105
data:
  {"annotated_genes":["SJAG_04884","SJAG_03131","SJAG_00997","SJAG_04287","SJAG_04885"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88423,88425,88424],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0700275"},{"annotations":[89130,89129],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013872"}]},"cv_name":"mondo","definition":"A disease involving the prostate gland.","direct_ancestors":[{"relation_name":"is_a","term_name":"male reproductive system disorder","termid":"MONDO:0003150"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00997":null,"SJAG_03131":null,"SJAG_04287":null,"SJAG_04884":null,"SJAG_04885":null},"genotype_count":0,"is_obsolete":false,"name":"prostate disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["EFO:0009602","SCTID:30281009","DOID:47","MEDGEN:10964","UMLS:C0033575","MESH:D011469","NCIT:C26865","ICD9:602.8","ICD9:602.9"],"synonyms":[{"name":"disease of prostate gland","type":"exact"},{"name":"disease or disorder of prostate gland","type":"exact"},{"name":"disorder of prostate gland","type":"exact"},{"name":"prostate disease","type":"exact"},{"name":"prostate disorder","type":"exact"},{"name":"prostate gland disease","type":"exact"},{"name":"prostate gland disease or disorder","type":"exact"}],"termid":"MONDO:0003105","terms_by_termid":{"MONDO:0013872":null,"MONDO:0700275":null},"xrefs":{"Monarch":{"xref_id":"0003105"}}}


id: PBO:0035761
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_tyrosine","termid":"PBO:0035761"}


id: MONDO:0007857
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Keratosis palmaris et plantaris-clinodactyly syndrome is characterized by the association of palmoplantar keratosis with clinodactyly of the fifth finger. Less than 20 cases have been described in the literature so far, and the majority of reported patients were of Mexican origin. Transmission is autosomal dominant.","definition_xrefs":["Orphanet:86919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diffuse palmoplantar keratoderma","termid":"MONDO:0017666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"keratosis palmaris et plantaris-clinodactyly syndrome","secondary_identifiers":["MESH:C563646","UMLS:C1835663","MEDGEN:320656","GARD:16766","OMIM:148520"],"synonyms":[{"name":"keratosis palmaris ET plantaris with clinodactyly","type":"related"},{"name":"palmoplantar keratoderma-clinodactyly syndrome","type":"exact"}],"termid":"MONDO:0007857","xrefs":{"Monarch":{"xref_id":"0007857"}}}


id: PBO:0061611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NudC domain containing 2","termid":"PBO:0061611"}


id: GO:0043570
data:
  {"annotated_genes":["SJAG_02187","SJAG_04816","SJAG_01832","SJAG_02748","SJAG_01050","SJAG_05180","SJAG_03898","SJAG_01419","SJAG_05237","SJAG_03997","SJAG_00247","SJAG_04671","SJAG_02226","SJAG_04855"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93577,102402,107902,109585,118297],"is_not":false,"summary":null,"term":"GO:0043570"},{"annotations":[72052,101096,97828,102991],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043007"},{"annotations":[106248],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045458"},{"annotations":[105050],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902681"},{"annotations":[116886,101177,104097],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031582"}]},"cv_name":"biological_process","definition":"Any process involved in sustaining the fidelity and copy number of DNA repeat elements.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"},{"relation_name":"is_a","term_name":"chromosome organization","termid":"GO:0051276"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00247":null,"SJAG_01050":null,"SJAG_01419":null,"SJAG_01832":null,"SJAG_02187":null,"SJAG_02226":null,"SJAG_02748":null,"SJAG_03898":null,"SJAG_03997":null,"SJAG_04671":null,"SJAG_04816":null,"SJAG_04855":null,"SJAG_05180":null,"SJAG_05237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"maintenance of DNA repeat elements","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0043570","terms_by_termid":{"GO:0031582":null,"GO:0043007":null,"GO:0043570":null,"GO:0045458":null,"GO:1902681":null}}


id: MONDO:0000619
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete triple-receptor negative breast cancer (obsolete MONDO:0000619)","termid":"MONDO:0000619","xrefs":{"Monarch":{"xref_id":"0000619"}}}


id: PBO:0080922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta","termid":"PBO:0080922"}


id: PBO:0047335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibulin 1","termid":"PBO:0047335"}


id: PR:Q10104
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine hydroxymethyltransferase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine hydroxymethyltransferase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18G6.04c","secondary_identifiers":["UniProtKB:Q10104"],"synonyms":[{"name":"SHMT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SHMT2","type":"exact"},{"name":"glycine hydroxymethyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"serine methylase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10104"}


id: GO:1901117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cephamycin C.","definition_xrefs":["UniPathway:UPA00183","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-lactam antibiotic catabolic process","termid":"GO:0030655"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"cephamycin C metabolic process","termid":"GO:1901116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006790"],"is_obsolete":false,"name":"cephamycin C catabolic process","synonyms":[{"name":"cephamycin C breakdown","type":"exact"},{"name":"cephamycin C catabolism","type":"exact"},{"name":"cephamycin C degradation","type":"exact"}],"termid":"GO:1901117"}


id: GO:0005657
data:
  {"annotated_genes":["SJAG_05197","SJAG_04150","SJAG_03927","SJAG_01354","SJAG_02172","SJAG_02818","SJAG_02800","SJAG_01762","SJAG_02198","SJAG_00884","SJAG_02908","SJAG_00958","SJAG_00618","SJAG_00611","SJAG_03495","SJAG_04791","SJAG_01823","SJAG_04879","SJAG_03722","SJAG_01010","SJAG_02627","SJAG_00536","SJAG_03128","SJAG_00814","SJAG_02610","SJAG_00272","SJAG_04995","SJAG_02182","SJAG_00874","SJAG_02394","SJAG_04210","SJAG_00153","SJAG_04671","SJAG_03855","SJAG_04272","SJAG_03780","SJAG_04183","SJAG_04877","SJAG_00696","SJAG_00198","SJAG_05301","SJAG_03451","SJAG_04190","SJAG_01698","SJAG_05239","SJAG_02439","SJAG_00863","SJAG_00729","SJAG_02724","SJAG_00857","SJAG_03097","SJAG_01267","SJAG_00399","SJAG_02348","SJAG_04994","SJAG_02667","SJAG_02074","SJAG_00327","SJAG_05232","SJAG_03898"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72132,74688,76600,76987],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005658"},{"annotations":[76823,104647,72734,78622],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043625"},{"annotations":[118108,82029,78946],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005662"},{"annotations":[79533,78848,70497,78214,74390,114684],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043599"},{"annotations":[111786,63644,92474,113753,120054,109888,97821,94370,94801,105970,109179,109670,114596,79251,96883,75605,105141,113121,115033,92253,109562,113496,58640,61859,101116,102427,104698,106039,96642,115012,105803,117264,115423,61801,67338,99133,113239,57269,101233],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043596"},{"annotations":[114365],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043601"},{"annotations":[79998,101171,82119],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031298"}]},"cv_name":"cellular_component","definition":"The Y-shaped region of a replicating DNA molecule, resulting from the separation of the DNA strands and in which the synthesis of new strands takes place. Also includes associated protein complexes.","definition_xrefs":["ISBN:0198547684","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"chromosome","termid":"GO:0005694"}],"gene_count":60,"genes_by_uniquename":{"SJAG_00153":null,"SJAG_00198":null,"SJAG_00272":null,"SJAG_00327":null,"SJAG_00399":null,"SJAG_00536":null,"SJAG_00611":null,"SJAG_00618":null,"SJAG_00696":null,"SJAG_00729":null,"SJAG_00814":null,"SJAG_00857":null,"SJAG_00863":null,"SJAG_00874":null,"SJAG_00884":null,"SJAG_00958":null,"SJAG_01010":null,"SJAG_01267":null,"SJAG_01354":null,"SJAG_01698":null,"SJAG_01762":null,"SJAG_01823":null,"SJAG_02074":null,"SJAG_02172":null,"SJAG_02182":null,"SJAG_02198":null,"SJAG_02348":null,"SJAG_02394":null,"SJAG_02439":null,"SJAG_02610":null,"SJAG_02627":null,"SJAG_02667":null,"SJAG_02724":null,"SJAG_02800":null,"SJAG_02818":null,"SJAG_02908":null,"SJAG_03097":null,"SJAG_03128":null,"SJAG_03451":null,"SJAG_03495":null,"SJAG_03722":null,"SJAG_03780":null,"SJAG_03855":null,"SJAG_03898":null,"SJAG_03927":null,"SJAG_04150":null,"SJAG_04183":null,"SJAG_04190":null,"SJAG_04210":null,"SJAG_04272":null,"SJAG_04671":null,"SJAG_04791":null,"SJAG_04877":null,"SJAG_04879":null,"SJAG_04994":null,"SJAG_04995":null,"SJAG_05197":null,"SJAG_05232":null,"SJAG_05239":null,"SJAG_05301":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005694","GO:0005575"],"is_obsolete":false,"name":"replication fork","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Wikipedia:Replication_fork"],"synonyms":[{"name":"replication focus","type":"related"}],"termid":"GO:0005657","terms_by_termid":{"GO:0005658":null,"GO:0005662":null,"GO:0031298":null,"GO:0043596":null,"GO:0043599":null,"GO:0043601":null,"GO:0043625":null}}


id: PR:O14072
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A manganese-transporting ATPase 13A1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01219","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"manganese-transporting ATPase 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPACUNK4.07c","secondary_identifiers":["UniProtKB:O14072"],"synonyms":[{"name":"Spom972h-ATP13A1","type":"exact"}],"termid":"PR:O14072"}


id: PR:Q09899
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A porphobilinogen deaminase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11557:SF0","OMA:SCHPO00086"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"porphobilinogen deaminase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24B11.13","secondary_identifiers":["UniProtKB:Q09899"],"synonyms":[{"name":"HMBS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PBG (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-HMBS","type":"exact"},{"name":"hydroxymethylbilane synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"pre-uroporphyrinogen synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09899"}


id: PBO:0059315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L54","termid":"PBO:0059315"}


id: PBO:0083217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps verified gene ARO9/YHR137W; identified by gene-trapping, expression analysis, and genome-wide homology searching","termid":"PBO:0083217"}


id: GO:0021671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of rhombomere 7 is generated and organized. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order.","definition_xrefs":["GOC:jid","GOC:cls","GOC:curators","GOC:dgh","GOC:dph","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere morphogenesis","termid":"GO:0021593"},{"relation_name":"part_of","term_name":"rhombomere 7 development","termid":"GO:0021573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 7 morphogenesis","termid":"GO:0021671"}


id: PR:O59666
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A copper-exporting P-type ATPase A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03101","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper-transporting ATPase ccc2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A3.01","secondary_identifiers":["UniProtKB:O59666"],"synonyms":[{"name":"Cu(2+)-ATPase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-copA","type":"exact"}],"termid":"PR:O59666"}


id: MONDO:0008064
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nasal bones, absence of","secondary_identifiers":["MEDGEN:90946","UMLS:C0339851","MESH:C562753","OMIM:161480"],"synonyms":[{"name":"nasal bones, absence of","type":"exact"}],"termid":"MONDO:0008064","xrefs":{"Monarch":{"xref_id":"0008064"}}}


id: GO:0019147
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-1-aminopropan-2-ol + NAD+ = aminoacetone + H+ + NADH.","definition_xrefs":["EC:1.1.1.75","RHEA:16517"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"(R)-aminopropanol dehydrogenase activity","secondary_identifiers":["MetaCyc:AMINOPROPDEHYDROG-RXN","KEGG_REACTION:R03759"],"synonyms":[{"name":"(R)-1-aminopropan-2-ol:NAD+ oxidoreductase activity","type":"related"},{"name":"1-aminopropan-2-ol-NAD+ dehydrogenase activity","type":"related"},{"name":"1-aminopropan-2-ol-dehydrogenase activity","type":"related"},{"name":"DL-1-aminopropan-2-ol: NAD+ dehydrogenase activity","type":"related"},{"name":"L(+)-1-aminopropan-2-ol-NAD/NADP oxidoreductase activity","type":"related"},{"name":"L(+)-1-aminopropan-2-ol:NAD+ oxidoreductase activity","type":"related"},{"name":"L-aminopropanol dehydrogenase activity","type":"exact"}],"termid":"GO:0019147"}


id: PBO:0000808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMT family","termid":"PBO:0000808"}


id: GO:0005756
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. One of two stalks that connect the catalytic core of the hydrogen-transporting ATP synthase to the mitochondrial membrane-associated F0 proteins; rotates within the catalytic core during catalysis.","definition_xrefs":["GOC:mtg_sensu","PMID:10838056"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial proton-transporting ATP synthase, central stalk (obsolete GO:0005756)","termid":"GO:0005756"}


id: MONDO:0015788
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of hemophilia B (see this term) that manifests in some women with mutations in the F9 gene (Xq28), encoding coagulation factor IX.","definition_xrefs":["Orphanet:177929"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemophilia B","termid":"MONDO:0010604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"symptomatic form of hemophilia B in female carriers","secondary_identifiers":["GARD:17077","MEDGEN:1843014","UMLS:C5680505"],"termid":"MONDO:0015788","xrefs":{"Monarch":{"xref_id":"0015788"}}}


id: PR:O13743
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pos1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13743"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C16E8.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16E8.08","synonyms":[{"name":"Spom972h-pos1","type":"exact"}],"termid":"PR:O13743"}


id: GO:0002109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maturation of a precursor Small SubUnit (SSU) ribosomal RNA (rRNA) molecule into a mature SSU-rRNA molecule from the pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, Large Subunit (LSU) the 5S rRNA in that order from 5' to 3' along the primary transcript.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturation of SSU-rRNA","termid":"GO:0030490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0042254","GO:0010467","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA,5S)","termid":"GO:0002109"}


id: PBO:0068949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 193, pseudogene","termid":"PBO:0068949"}


id: MONDO:0011682
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Episodic ataxia type 3 (EA3) is a very rare form of Hereditary episodic ataxia characterized by vestibular ataxia, vertigo, tinnitus, and interictal myokymia.","definition_xrefs":["Orphanet:79135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary episodic ataxia","termid":"MONDO:0016227"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"episodic ataxia type 3","secondary_identifiers":["MEDGEN:376220","MESH:C564697","DOID:0050991","OMIM:606554","SCTID:718755009","UMLS:C1847839","GARD:16702"],"synonyms":[{"name":"EA3","type":"related"},{"name":"ataxia, episodic, with vertigo and tinnitus","type":"related"},{"name":"episodic ataxia, type 3","type":"related"},{"name":"episodic ataxia-vertigo-tinnitus-myokymia syndrome","type":"exact"}],"termid":"MONDO:0011682","xrefs":{"Monarch":{"xref_id":"0011682"}}}


id: MONDO:0016021
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete early infantile epileptic encephalopathy (obsolete MONDO:0016021)","synonyms":[{"name":"obsolete early infantile epileptic encephalopathy","type":"exact"}],"termid":"MONDO:0016021","xrefs":{"Monarch":{"xref_id":"0016021"}}}


id: PBO:0042512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin related family member 17, pseudogene","termid":"PBO:0042512"}


id: GO:0034121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of toll-like receptor signaling pathway.","definition_xrefs":["GOC:add","PMID:16551253","PMID:17328678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pattern recognition receptor signaling pathway","termid":"GO:0062207"},{"relation_name":"regulates","term_name":"toll-like receptor signaling pathway","termid":"GO:0002224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of toll-like receptor signaling pathway","secondary_identifiers":["Reactome:R-HSA-9860276"],"synonyms":[{"name":"regulation of TLR signaling pathway","type":"exact"},{"name":"regulation of toll-like receptor signalling pathway","type":"exact"}],"termid":"GO:0034121"}


id: GO:0097072
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An interferon regulatory factor complex that consists of a homodimer of interferon regulatory factor 3.","definition_xrefs":["PMID:14556004","GOC:cna","PMID:12855817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interferon regulatory factor complex","termid":"GO:0097071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"interferon regulatory factor 3 complex","synonyms":[{"name":"IRF3:IRF3 complex","type":"exact"}],"termid":"GO:0097072"}


id: GO:0010253
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of UDP-L-rhamnose, a substance composed of rhamnose in glycosidic linkage with uridine diphosphate.","definition_xrefs":["PMID:15134748"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar biosynthetic process","termid":"GO:0009226"},{"relation_name":"is_a","term_name":"UDP-rhamnose metabolic process","termid":"GO:0033478"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"UDP-rhamnose biosynthetic process","secondary_identifiers":["MetaCyc:PWY-3261"],"synonyms":[{"name":"UDP-rhamnose anabolism","type":"exact"},{"name":"UDP-rhamnose biosynthesis","type":"exact"},{"name":"UDP-rhamnose formation","type":"exact"},{"name":"UDP-rhamnose synthesis","type":"exact"}],"termid":"GO:0010253"}


id: PBO:0072029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10","termid":"PBO:0072029"}


id: GO:1905016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of isoleucine-tRNA ligase activity.","definition_xrefs":["GOC:TermGenie","PMID:1665486","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of isoleucine-tRNA ligase activity (obsolete GO:1905016)","synonyms":[{"name":"down regulation of L-isoleucine:tRNAIle ligase (AMP-forming)","type":"exact"},{"name":"down regulation of isoleucine translase activity","type":"exact"},{"name":"down regulation of isoleucine-tRNA ligase activity","type":"exact"},{"name":"down regulation of isoleucine-tRNA synthetase activity","type":"exact"},{"name":"down regulation of isoleucine-transfer RNA ligase activity","type":"exact"},{"name":"down regulation of isoleucyl-tRNA synthetase activity","type":"exact"},{"name":"down regulation of isoleucyl-transfer RNA synthetase activity","type":"exact"},{"name":"down regulation of isoleucyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"down-regulation of L-isoleucine:tRNAIle ligase (AMP-forming)","type":"exact"},{"name":"down-regulation of isoleucine translase activity","type":"exact"},{"name":"down-regulation of isoleucine-tRNA ligase activity","type":"exact"},{"name":"down-regulation of isoleucine-tRNA synthetase activity","type":"exact"},{"name":"down-regulation of isoleucine-transfer RNA ligase activity","type":"exact"},{"name":"down-regulation of isoleucyl-tRNA synthetase activity","type":"exact"},{"name":"down-regulation of isoleucyl-transfer RNA synthetase activity","type":"exact"},{"name":"down-regulation of isoleucyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"downregulation of L-isoleucine:tRNAIle ligase (AMP-forming)","type":"exact"},{"name":"downregulation of isoleucine translase activity","type":"exact"},{"name":"downregulation of isoleucine-tRNA ligase activity","type":"exact"},{"name":"downregulation of isoleucine-tRNA synthetase activity","type":"exact"},{"name":"downregulation of isoleucine-transfer RNA ligase activity","type":"exact"},{"name":"downregulation of isoleucyl-tRNA synthetase activity","type":"exact"},{"name":"downregulation of isoleucyl-transfer RNA synthetase activity","type":"exact"},{"name":"downregulation of isoleucyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"inhibition of L-isoleucine:tRNAIle ligase (AMP-forming)","type":"narrow"},{"name":"inhibition of isoleucine translase activity","type":"narrow"},{"name":"inhibition of isoleucine-tRNA ligase activity","type":"narrow"},{"name":"inhibition of isoleucine-tRNA synthetase activity","type":"narrow"},{"name":"inhibition of isoleucine-transfer RNA ligase activity","type":"narrow"},{"name":"inhibition of isoleucyl-tRNA synthetase activity","type":"narrow"},{"name":"inhibition of isoleucyl-transfer RNA synthetase activity","type":"narrow"},{"name":"inhibition of isoleucyl-transfer ribonucleate synthetase activity","type":"narrow"},{"name":"negative regulation of L-isoleucine:tRNAIle ligase (AMP-forming)","type":"exact"},{"name":"negative regulation of isoleucine translase activity","type":"exact"},{"name":"negative regulation of isoleucine-tRNA synthetase activity","type":"exact"},{"name":"negative regulation of isoleucine-transfer RNA ligase activity","type":"exact"},{"name":"negative regulation of isoleucyl-tRNA synthetase activity","type":"exact"},{"name":"negative regulation of isoleucyl-transfer RNA synthetase activity","type":"exact"},{"name":"negative regulation of isoleucyl-transfer ribonucleate synthetase activity","type":"exact"}],"termid":"GO:1905016"}


id: PBO:0050537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HPN antisense RNA 1","termid":"PBO:0050537"}


id: PBO:0061658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUMB endocytic adaptor protein","termid":"PBO:0061658"}


id: PBO:0044421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 3 subfamily A member 5","termid":"PBO:0044421"}


id: PBO:0061834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-oxoglutarate and iron dependent oxygenase domain containing 2","termid":"PBO:0061834"}


id: PBO:0060551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBAS subunit of NRZ tethering complex","termid":"PBO:0060551"}


id: PBO:0079321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 11","termid":"PBO:0079321"}


id: RO:0002429
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"involved_in_regulation_of","termid":"RO:0002428"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"involved_in_positive_regulation_of","termid":"RO:0002429"}


id: MONDO:0006732
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Abnormal movements, including hyperkinesis; hypokinesia; tremor; and dystonia, associated with the use of certain medications or drugs. Muscles of the face, trunk, neck, and extremities are most commonly affected. Tardive dyskinesia refers to abnormal hyperkinetic movements of the muscles of the face, tongue, and neck associated with the use of neuroleptic agents (see antipsychotic agents). (Adams et al., Principles of Neurology, 6th ed, p1199)","definition_xrefs":["MESH:D004409"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"drug-induced dyskinesia","secondary_identifiers":["ICD9:333.99","EFO:1000904","MedDRA:10013916","MEDGEN:3935","SCTID:102448004","UMLS:C0013386"],"termid":"MONDO:0006732","xrefs":{"Monarch":{"xref_id":"0006732"}}}


id: MONDO:0002149
data:
  {"annotated_genes":["SJAG_04287","SJAG_02426","SJAG_02748","SJAG_04884","SJAG_00997","SJAG_04206","SJAG_01419","SJAG_04885","SJAG_03131","SJAG_04394"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89078,86811],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011962"},{"annotations":[88286,88287,88288],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008170"},{"annotations":[88425,88423,88424],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0700275"},{"annotations":[89130,89129],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013872"}]},"cv_name":"mondo","definition":"A malignant neoplasm involving the reproductive organ","direct_ancestors":[{"relation_name":"is_a","term_name":"cancer","termid":"MONDO:0004992"},{"relation_name":"is_a","term_name":"reproductive system neoplasm","termid":"MONDO:0006054"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00997":null,"SJAG_01419":null,"SJAG_02426":null,"SJAG_02748":null,"SJAG_03131":null,"SJAG_04206":null,"SJAG_04287":null,"SJAG_04394":null,"SJAG_04884":null,"SJAG_04885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"reproductive system cancer","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C36076","DOID:193","UMLS:C1334618","MEDGEN:233668"],"synonyms":[{"name":"cancer of reproductive organ","type":"exact"},{"name":"cancer of reproductive system","type":"exact"},{"name":"malignant neoplasm of reproductive organ","type":"exact"},{"name":"malignant neoplasm of reproductive system","type":"exact"},{"name":"malignant reproductive organ neoplasm","type":"exact"},{"name":"malignant reproductive system neoplasm","type":"exact"},{"name":"reproductive organ cancer","type":"exact"},{"name":"reproductive system cancer","type":"exact"},{"name":"reproductive tumor","type":"broad"},{"name":"reproductive tumour","type":"broad"}],"termid":"MONDO:0002149","terms_by_termid":{"MONDO:0008170":null,"MONDO:0011962":null,"MONDO:0013872":null,"MONDO:0700275":null},"xrefs":{"Monarch":{"xref_id":"0002149"}}}


id: PBO:0082747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the RSC chromatin remodeling complex; required for expression of mid-late sporulation-specific genes; contains two essential bromodomains, a bromo-adjacent homology (BAH) domain, and an AT hook; RSC1 has a paralog, RSC2, that arose from the whole genome duplication","termid":"PBO:0082747"}


id: MONDO:0000308
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A systemic mycosis that arises from infection in an immunologically normal host.","direct_ancestors":[{"relation_name":"is_a","term_name":"systemic mycosis","termid":"MONDO:0000256"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary systemic mycosis","secondary_identifiers":["DOID:0050292"],"termid":"MONDO:0000308","xrefs":{"Monarch":{"xref_id":"0000308"}}}


id: GO:0120550
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 5'-end (N(7)-methyl 5'-triphosphoguanosine)-(2'-O-methyl-ribonucleoside)-(ribonucleotide) in mRNA or snRNA + S-adenosyl-L-methionine = a 5'-end (N(7)-methyl 5'-triphosphoguanosine)-(2'-O-methyl-ribonucleoside)-(2'-O-methyl-ribonucleotide) in mRNA or snRNA + S-adenosyl-L-homocysteine + H+. This activity catalyzes the methylation of the ribose on the second transcribed nucleotide of mRNAs and snRNAs.","definition_xrefs":["EC:2.1.1.296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"},{"relation_name":"is_a","term_name":"RNA methyltransferase activity","termid":"GO:0008173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0140098","GO:0016741","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"methyltransferase cap2 activity","secondary_identifiers":["MetaCyc:RXN-14928"],"synonyms":[{"name":"cap2-MTase activity","type":"exact"},{"name":"mRNA (nucleoside-2'-O-)-methyltransferase activity","type":"related"}],"termid":"GO:0120550"}


id: PBO:0036122
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cytoplasmic_microtubule_nucleation_from_spindle_pole_body_during_mitotic_interphase","termid":"PBO:0036122"}


id: PBO:0090666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial GIDA family tRNA uridine 5-carboxymethylaminomethyl modification enzyme Ips1","termid":"PBO:0090666"}


id: GO:0070733
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + protein = diphosphate + adenylyl-protein; mediates the addition of an adenylyl (adenosine 5'-monophosphate; AMP group) to L-serine, L-threonine, and L-tyrosine residues in target proteins.","definition_xrefs":["PMID:19039103","GOC:mah","PMID:33947243","PMID:19362538"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016779","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"AMPylase activity","secondary_identifiers":["EC:2.7.7.108"],"synonyms":[{"name":"AMPylator","type":"related"},{"name":"adenosine monophosphate-protein transferase activity","type":"exact"},{"name":"protein adenylyltransferase activity","type":"related"}],"termid":"GO:0070733"}


id: MONDO:0012358
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"leprosy","termid":"MONDO:0005124"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leprosy, susceptibility to, 1","secondary_identifiers":["MEDGEN:332089","OMIM:609888","UMLS:C1835932"],"synonyms":[{"name":"LPRS1","type":"exact"},{"name":"leprosy, Paucibacillary type, susceptibility to, 1","type":"related"},{"name":"leprosy, paucibacillary type, susceptibility to","type":"exact"},{"name":"leprosy, susceptibility to, 1","type":"exact"}],"termid":"MONDO:0012358","xrefs":{"Monarch":{"xref_id":"0012358"}}}


id: GO:0014047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of glutamate by a cell. The glutamate is the most abundant excitatory neurotransmitter in the nervous system.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transport","termid":"GO:0006835"},{"relation_name":"is_a","term_name":"acidic amino acid transport","termid":"GO:0015800"},{"relation_name":"is_a","term_name":"secretion by cell","termid":"GO:0032940"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"glutamate secretion","termid":"GO:0014047"}


id: PBO:0061951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily A member 3 pseudogene","termid":"PBO:0061951"}


id: PBO:0060430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nascent polypeptide associated complex subunit alpha","termid":"PBO:0060430"}


id: MONDO:0019993
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A narrowing of renal arteries that is present since birth.","definition_xrefs":["PMID:25316474"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"},{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"congenital renal artery stenosis","secondary_identifiers":["SCTID:271432005","UMLS:C0495523","icd11.foundation:856359002","GARD:19381","MEDGEN:635552","ICD10CM:Q27.1","Orphanet:97598"],"synonyms":[{"name":"congenital RAS","type":"exact"},{"name":"congenital renovascular hypoplasia","type":"exact"}],"termid":"MONDO:0019993","xrefs":{"Monarch":{"xref_id":"0019993"}}}


id: PBO:0040838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BLACAT1 overlapping LEMD1 locus","termid":"PBO:0040838"}


id: PBO:0109937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase, spliceosomal Prp22","termid":"PBO:0109937"}


id: SO:0000250
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A post_transcriptionally modified base.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"base","termid":"SO:0001236"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_RNA_base_feature","synonyms":[{"name":"modified RNA base feature","type":"exact"}],"termid":"SO:0000250"}


id: PBO:0109028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIMC1 pseudogene 1","termid":"PBO:0109028"}


id: PBO:0078579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 53B, pseudogene","termid":"PBO:0078579"}


id: GO:0046550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of asparagine to (3-aminopropyl)(L-aspartyl-1-amino)phosphoryl-5'-adenosine as found in microcin C7 produced from the mccA gene in E. coli plasmid pMccC7.","definition_xrefs":["RESID:AA0328"],"gene_count":0,"genotype_count":0,"name":"obsolete (3-aminopropyl)(L-aspartyl-1-amino)phosphoryl-5'-adenosine biosynthetic process from asparagine (obsolete GO:0046550)","synonyms":[{"name":"(3-aminopropyl)(L-aspartyl-1-amino)phosphoryl-5'-adenosine anabolism from asparagine","type":"exact"},{"name":"(3-aminopropyl)(L-aspartyl-1-amino)phosphoryl-5'-adenosine formation from asparagine","type":"exact"},{"name":"(3-aminopropyl)(L-aspartyl-1-amino)phosphoryl-5'-adenosine synthesis from asparagine","type":"exact"}],"termid":"GO:0046550"}


id: PBO:0089065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty-acyl-CoA binding protein Acb1","termid":"PBO:0089065"}


id: PBO:0025457
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"changed from ncRNA to protein 20151128","termid":"PBO:0025457"}


id: GO:1990794
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of a cell situated by the cell sides which interface adjacent cells and near the base. Often used in reference to animal polarized epithelial cells.","definition_xrefs":["PMID:18495799"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"basal part of cell","termid":"GO:0045178"},{"relation_name":"part_of","term_name":"lateral part of cell","termid":"GO:0097574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"basolateral part of cell","termid":"GO:1990794"}


id: MONDO:0958011
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 117","secondary_identifiers":["MEDGEN:1848763","OMIM:620668","UMLS:C5882739"],"termid":"MONDO:0958011","xrefs":{"Monarch":{"xref_id":"0958011"}}}


id: PBO:0068071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 376","termid":"PBO:0068071"}


id: GO:1905383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a presynapse.","definition_xrefs":["GO_REF:0000087","PMID:24449494","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to synapse","termid":"GO:0035418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to presynapse","synonyms":[{"name":"protein localisation in presynapse","type":"exact"},{"name":"protein localisation to presynapse","type":"exact"},{"name":"protein localization in presynapse","type":"exact"},{"name":"recruitment of presynaptic proteins","type":"exact"}],"termid":"GO:1905383"}


id: GO:0045997
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of ecdysteroids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ecdysteroid biosynthetic process","termid":"GO:0007554"},{"relation_name":"is_a","term_name":"negative regulation of ecdysteroid metabolic process","termid":"GO:0045965"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of steroid hormone biosynthetic process","termid":"GO:0090032"},{"relation_name":"negatively_regulates","term_name":"ecdysteroid biosynthetic process","termid":"GO:0045456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of ecdysteroid biosynthetic process","synonyms":[{"name":"down regulation of ecdysteroid biosynthetic process","type":"exact"},{"name":"down-regulation of ecdysteroid biosynthetic process","type":"exact"},{"name":"downregulation of ecdysteroid biosynthetic process","type":"exact"},{"name":"inhibition of ecdysteroid biosynthetic process","type":"narrow"},{"name":"negative regulation of ecdysteroid anabolism","type":"exact"},{"name":"negative regulation of ecdysteroid biosynthesis","type":"exact"},{"name":"negative regulation of ecdysteroid formation","type":"exact"},{"name":"negative regulation of ecdysteroid synthesis","type":"exact"}],"termid":"GO:0045997"}


id: PBO:0062527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily U member 3","termid":"PBO:0062527"}


id: PBO:0076228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPT16 homolog, facilitates chromatin remodeling subunit pseudogene 1","termid":"PBO:0076228"}


id: PBO:0085333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylserine decarboxylase of the Golgi and vacuolar membranes; converts phosphatidylserine to phosphatidylethanolamine; controls vacuolar membrane phospholipid content by regulating phospholipids in compartments that will eventually give rise to the vacuole; loss of Psd2p causes a specific reduction in vacuolar membrane PE levels while total PE levels are not significantly affected","termid":"PBO:0085333"}


id: PBO:0015665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho-type GTPase activating protein Rga2","termid":"PBO:0015665"}


id: PBO:0046843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 6","termid":"PBO:0046843"}


id: PBO:0090804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 (UBR family) Ubr11","termid":"PBO:0090804"}


id: MONDO:1012780
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any epidermolysis bullosa simplex that occurs in cattle due to a mutation in the KRT5 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa simplex, cattle","termid":"MONDO:1011499"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epidermolysis bullosa simplex, KRT5-related, cattle","secondary_identifiers":["OMIA:002081-9913"],"termid":"MONDO:1012780","xrefs":{"Monarch":{"xref_id":"1012780"}}}


id: GO:0032530
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of a microvillus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of plasma membrane bounded cell projection organization","termid":"GO:0120035"},{"relation_name":"regulates","term_name":"microvillus organization","termid":"GO:0032528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of microvillus organization","synonyms":[{"name":"regulation of microvillus organisation","type":"exact"},{"name":"regulation of microvillus organization and biogenesis","type":"related"}],"termid":"GO:0032530"}


id: MONDO:0007245
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cutaneous disorder characterized by the presence of several cafe-au-lait (CAL) macules without any other manifestations of neurofibromatosis or any other systemic disorder.","definition_xrefs":["Orphanet:2678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperpigmentation of the skin","termid":"MONDO:0019289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"cafe au lait spots, multiple","secondary_identifiers":["OMIM:114030","UMLS:C1861975","MEDGEN:396266","MESH:C537421","GARD:3967"],"synonyms":[{"name":"NF6","type":"exact"},{"name":"autosomal dominant café au lait spots","type":"exact"},{"name":"cafe-au-lait spots, multiple","type":"exact"},{"name":"familial cafe-au-lait spots","type":"exact"},{"name":"familial café-au-lait spots","type":"exact"},{"name":"multiple cafe-au-lait spots","type":"exact"},{"name":"multiple cafe-au-lait syndrome","type":"exact"},{"name":"multiple café-au-lait spots","type":"exact"},{"name":"multiple café-au-lait syndrome","type":"exact"},{"name":"neurofibromatosis type 6","type":"exact"}],"termid":"MONDO:0007245","xrefs":{"Monarch":{"xref_id":"0007245"}}}


id: GO:2000424
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of eosinophil chemotaxis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of granulocyte chemotaxis","termid":"GO:0071624"},{"relation_name":"is_a","term_name":"positive regulation of eosinophil migration","termid":"GO:2000418"},{"relation_name":"is_a","term_name":"regulation of eosinophil chemotaxis","termid":"GO:2000422"},{"relation_name":"positively_regulates","term_name":"eosinophil chemotaxis","termid":"GO:0048245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of eosinophil chemotaxis","termid":"GO:2000424"}


id: PATO:0000937
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's lacking organisation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organization quality","termid":"PATO:0002264"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disorganized","termid":"PATO:0000937"}


id: GO:0051252
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of RNA metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000024":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null},"synonyms":[{"name":"regulation of RNA 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id: GO:0003171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the atrioventricular valve over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart valve development","termid":"GO:0003170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrioventricular valve development","synonyms":[{"name":"AV valve development","type":"exact"}],"termid":"GO:0003171"}


id: GO:0090365
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the covalent alteration of one or more nucleotides within an mRNA molecule to produce an mRNA molecule with a sequence that differs from that coded genetically.","definition_xrefs":["GOC:sl","GOC:tb","PMID:14559896","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA metabolic process","termid":"GO:1903311"},{"relation_name":"regulates","term_name":"mRNA modification","termid":"GO:0016556"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0008150","GO:0016071"],"is_obsolete":false,"name":"regulation of mRNA modification","synonyms":[{"name":"regulation of mRNA editing","type":"narrow"}],"termid":"GO:0090365"}


id: GO:0002495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class II protein complex. The peptide antigen is typically, but not always, processed from a whole protein.","definition_xrefs":["ISBN:0781735149","PMID:15531770","PMID:15771591","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","termid":"GO:0002504"},{"relation_name":"is_a","term_name":"antigen processing and presentation of peptide antigen","termid":"GO:0048002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of peptide antigen via MHC class II","synonyms":[{"name":"peptide antigen processing and presentation via MHC class II","type":"exact"}],"termid":"GO:0002495"}


id: MONDO:0005100
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic disorder, possibly autoimmune, marked by excessive production of collagen which results in hardening and thickening of body tissues. The two types of systemic scleroderma, limited cutaneous and diffuse cutaneous are classified with focus on the extent of affected skin. A relationship exists between the extent of skin area affected and degree of internal organ/system involvement. Systemic scleroderma can manifest itself in pulmonary fibrosis, Raynaud's syndrome, digestive system telangiectasias, renal hypertension and/or pulmonary hypertension.","definition_xrefs":["NCIT:C72070"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"respiratory system disorder","termid":"MONDO:0005087"},{"relation_name":"excluded_subClassOf","term_name":"non-familial restrictive cardiomyopathy","termid":"MONDO:0016345"},{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"is_a","term_name":"scleroderma","termid":"MONDO:0019340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"systemic sclerosis","secondary_identifiers":["MEDGEN:19897","NORD:2007","MESH:D012595","UMLS:C0036421","ICD10CM:M34","MedDRA:10042953","NANDO:2200429","EFO:0000717","DOID:418","Orphanet:90291","GARD:9748","NANDO:1200277","SCTID:89155008","ICD9:710.1","icd11.foundation:1084365812"],"synonyms":[{"name":"PSS (progressive systemic sclerosis)","type":"exact"},{"name":"SSc","type":"exact"},{"name":"SSc, diffuse sclerosis","type":"exact"},{"name":"Scleroderma","type":"broad"},{"name":"Scleroderma (& [systemic sclerosis])","type":"exact"},{"name":"Scleroderma syndrome","type":"exact"},{"name":"Scleroderma, diffuse","type":"exact"},{"name":"Scleroderma, systemic","type":"exact"},{"name":"Systemic Scleroderma","type":"exact"},{"name":"diffuse Scleroderma","type":"exact"},{"name":"diffuse sclerosis","type":"exact"},{"name":"progressive systemic sclerosis","type":"exact"},{"name":"systemic Scleroderma","type":"exact"},{"name":"systemic scleroderma","type":"exact"},{"name":"systemic sclerosis","type":"exact"}],"termid":"MONDO:0005100","xrefs":{"Monarch":{"xref_id":"0005100"}}}


id: PBO:0018220
data:
  {"annotation_feature_type":"gene","cv_name":"feature_relationshipprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expression","termid":"PBO:0018220"}


id: MONDO:0015417
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"facial cleft","termid":"MONDO:0015411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tessier number 6 facial cleft","secondary_identifiers":["Orphanet:141265","GARD:19969","icd11.foundation:1934815559","MEDGEN:609365","UMLS:C0432120"],"termid":"MONDO:0015417","xrefs":{"Monarch":{"xref_id":"0015417"}}}


id: MONDO:0005001
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the stomach that is chronic in nature.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastritis","termid":"MONDO:0004966"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"chronic gastritis","secondary_identifiers":["UMLS:C0085695","EFO:0000337","ICD9:535.4","NCIT:C26929","HP:0005231","MEDGEN:39089","ICD9:535.41","SCTID:8493009","ICD9:535.40"],"synonyms":[{"name":"chronic gastritis","type":"exact"},{"name":"chronic gastritis (disease)","type":"exact"},{"name":"gastritis (disease), chronic","type":"exact"}],"termid":"MONDO:0005001","xrefs":{"Monarch":{"xref_id":"0005001"}}}


id: GO:0038090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by vascular endothelial growth factor (VEGF) binding to a platelet-derived growth factor receptor (PDGFR) on the surface of a cell, which activates or increases the frequency, rate or extent of the orderly movement of a cell from one site to another.","definition_xrefs":["GOC:signaling","GOC:bf","PMID:17470632"],"direct_ancestors":[{"relation_name":"is_a","term_name":"VEGF-activated platelet-derived growth factor receptor signaling pathway","termid":"GO:0038086"},{"relation_name":"is_a","term_name":"positive regulation of cell migration by vascular endothelial growth factor signaling pathway","termid":"GO:0038089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of cell migration by VEGF-activated platelet derived growth factor receptor signaling pathway","synonyms":[{"name":"VEGF/PDGFR-induced cell migration","type":"exact"},{"name":"positive regulation of cell migration by VEGF-activated platelet derived growth factor receptor signalling pathway","type":"exact"},{"name":"positive regulation of cell migration by VEGF/PDGFR signaling pathway","type":"exact"}],"termid":"GO:0038090"}


id: MONDO:0031415
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Carey-Fineman-Ziter syndrome","secondary_identifiers":["MEDGEN:338115","OMIMPS:254940","GARD:3889","UMLS:C1850746","icd11.foundation:1784462638","Orphanet:1358"],"termid":"MONDO:0031415","xrefs":{"Monarch":{"xref_id":"0031415"}}}


id: PBO:0061940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily P member 1 (gene/pseudogene)","termid":"PBO:0061940"}


id: MONDO:0006986
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An enlarged thyroid gland with at least 50% of the gland situated behind the sternum. It is an unusual presentation of an intrathoracic goiter. Substernal goiters frequently cause compression on the trachea leading to deviation, narrowing, and respiratory symptoms.","definition_xrefs":["MESH:D006045"],"direct_ancestors":[{"relation_name":"is_a","term_name":"goiter","termid":"MONDO:0005397"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"substernal goiter","secondary_identifiers":["MEDGEN:9066","UMLS:C0018024","DOID:13200","SCTID:66392007"],"synonyms":[{"name":"retrosternal thyroid goiter","type":"exact"},{"name":"retrosternal thyroid goitre","type":"exact"}],"termid":"MONDO:0006986","xrefs":{"Monarch":{"xref_id":"0006986"}}}


id: PBO:0005356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-galactose transporter Gms1","termid":"PBO:0005356"}


id: FYPO:0008322
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the acetylation of lysine at position 9 of histone H3 at one or more promoter regions occurs to a lower extent than normal.","definition_xrefs":["PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K9 acetylation during vegetative growth","termid":"FYPO:0001442"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002274","FYPO:0000002","FYPO:0001985","FYPO:0002494","FYPO:0005447"],"is_obsolete":false,"name":"decreased histone H3-K9 acetylation at promoter during vegetative growth","termid":"FYPO:0008322"}


id: GO:0052816
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a long-chain fatty acyl-CoA + H2O = a long-chain fatty acid + CoA + H+. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.","definition_xrefs":["RHEA:67680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acyl-CoA hydrolase activity","termid":"GO:0047617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"long-chain fatty acyl-CoA hydrolase activity","synonyms":[{"name":"long-chain acyl coenzyme A hydrolase activity","type":"related"},{"name":"long-chain acyl-thioester hydrolase activity","type":"related"},{"name":"long-chain hydrolase activity","type":"related"},{"name":"long-chain-acyl-CoA hydrolase activity","type":"related"}],"termid":"GO:0052816"}


id: GO:0048752
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the semicircular canals are generated and organized.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube morphogenesis","termid":"GO:0035239"},{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"inner ear morphogenesis","termid":"GO:0042472"},{"relation_name":"part_of","term_name":"semicircular canal development","termid":"GO:0060872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"semicircular canal morphogenesis","synonyms":[{"name":"embryonic semicircular canal morphogenesis","type":"exact"}],"termid":"GO:0048752"}


id: PBO:0067207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 272, pseudogene","termid":"PBO:0067207"}


id: PBO:0039612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annexin A1","termid":"PBO:0039612"}


id: GO:1903669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of chemorepellent activity.","definition_xrefs":["GO_REF:0000059","PMID:24390142","PMID:22711818","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of chemorepellent activity (obsolete GO:1903669)","synonyms":[{"name":"activation of chemorepellant activity","type":"narrow"},{"name":"activation of chemorepellent activity","type":"narrow"},{"name":"positive regulation of chemorepellant activity","type":"exact"},{"name":"up regulation of chemorepellant activity","type":"exact"},{"name":"up regulation of chemorepellent activity","type":"exact"},{"name":"up-regulation of chemorepellant activity","type":"exact"},{"name":"up-regulation of chemorepellent activity","type":"exact"},{"name":"upregulation of chemorepellant activity","type":"exact"},{"name":"upregulation of chemorepellent activity","type":"exact"}],"termid":"GO:1903669"}


id: GO:0060269
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell migration process in which a follicle cell migrates as part of an epithelial sheet between the nurse cells and the oocyte. At the end of migration, they cover the anterior of the oocyte.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"follicle cell of egg chamber migration","termid":"GO:0007297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"centripetally migrating follicle cell migration","termid":"GO:0060269"}


id: GO:0001063
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template that contains a plastid PEP-B RNA polymerase II specific promoter to direct initiation and catalyses DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo'.","definition_xrefs":["PMID:20701995","GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete plastid PEP-B RNA polymerase activity (obsolete GO:0001063)","termid":"GO:0001063"}


id: GO:1904231
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of succinate dehydrogenase activity.","definition_xrefs":["GOC:BHF","GOC:rl","GOC:TermGenie","PMID:18160053","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of oxidoreductase activity","termid":"GO:0051353"},{"relation_name":"is_a","term_name":"regulation of succinate dehydrogenase activity","termid":"GO:1904229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of succinate dehydrogenase activity","synonyms":[{"name":"positive regulation of fumarate dehydrogenase activity","type":"exact"},{"name":"positive regulation of fumarate reductase activity","type":"exact"},{"name":"positive regulation of fumaric hydrogenase activity","type":"exact"},{"name":"positive regulation of succinate oxidoreductase activity","type":"exact"},{"name":"activation of fumarate dehydrogenase activity","type":"narrow"},{"name":"activation of fumarate reductase activity","type":"narrow"},{"name":"activation of fumaric hydrogenase activity","type":"narrow"},{"name":"activation of succinate dehydrogenase activity","type":"narrow"},{"name":"activation of succinate oxidoreductase activity","type":"narrow"},{"name":"activation of succinate:(acceptor) oxidoreductase activity","type":"narrow"},{"name":"activation of succinate:acceptor oxidoreductase activity","type":"narrow"},{"name":"activation of succinic acid dehydrogenase activity","type":"narrow"},{"name":"activation of succinodehydrogenase activity","type":"narrow"},{"name":"activation of succinyl dehydrogenase activity","type":"narrow"},{"name":"positive regulation of succinate:(acceptor) oxidoreductase activity","type":"exact"},{"name":"positive regulation of succinate:acceptor oxidoreductase activity","type":"exact"},{"name":"positive regulation of succinic acid dehydrogenase activity","type":"exact"},{"name":"positive regulation of succinodehydrogenase activity","type":"exact"},{"name":"positive regulation of succinyl dehydrogenase activity","type":"exact"},{"name":"up regulation of fumarate dehydrogenase activity","type":"exact"},{"name":"up regulation of fumarate reductase activity","type":"exact"},{"name":"up regulation of fumaric hydrogenase activity","type":"exact"},{"name":"up regulation of succinate dehydrogenase activity","type":"exact"},{"name":"up regulation of succinate oxidoreductase activity","type":"exact"},{"name":"up regulation of succinate:(acceptor) oxidoreductase activity","type":"exact"},{"name":"up regulation of succinate:acceptor oxidoreductase activity","type":"exact"},{"name":"up regulation of succinic acid dehydrogenase activity","type":"exact"},{"name":"up regulation of succinodehydrogenase activity","type":"exact"},{"name":"up regulation of succinyl dehydrogenase activity","type":"exact"},{"name":"up-regulation of fumarate dehydrogenase activity","type":"exact"},{"name":"up-regulation of fumarate reductase activity","type":"exact"},{"name":"up-regulation of fumaric hydrogenase activity","type":"exact"},{"name":"up-regulation of succinate dehydrogenase activity","type":"exact"},{"name":"up-regulation of succinate oxidoreductase activity","type":"exact"},{"name":"up-regulation of succinate:(acceptor) oxidoreductase activity","type":"exact"},{"name":"up-regulation of succinate:acceptor oxidoreductase activity","type":"exact"},{"name":"up-regulation of succinic acid dehydrogenase activity","type":"exact"},{"name":"up-regulation of succinodehydrogenase activity","type":"exact"},{"name":"up-regulation of succinyl dehydrogenase activity","type":"exact"},{"name":"upregulation of fumarate dehydrogenase activity","type":"exact"},{"name":"upregulation of fumarate reductase activity","type":"exact"},{"name":"upregulation of fumaric hydrogenase activity","type":"exact"},{"name":"upregulation of succinate dehydrogenase activity","type":"exact"},{"name":"upregulation of succinate oxidoreductase activity","type":"exact"},{"name":"upregulation of succinate:(acceptor) oxidoreductase activity","type":"exact"},{"name":"upregulation of succinate:acceptor oxidoreductase activity","type":"exact"},{"name":"upregulation of succinic acid dehydrogenase activity","type":"exact"},{"name":"upregulation of succinodehydrogenase activity","type":"exact"},{"name":"upregulation of succinyl dehydrogenase activity","type":"exact"}],"termid":"GO:1904231"}


id: MONDO:0008028
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy","termid":"MONDO:0020121"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"muscular dystrophy, Barnes type","secondary_identifiers":["MESH:C563558","OMIM:158800","MEDGEN:322468","UMLS:C1834688"],"synonyms":[{"name":"muscular dystrophy, Barnes type","type":"exact"}],"termid":"MONDO:0008028","xrefs":{"Monarch":{"xref_id":"0008028"}}}


id: PBO:0063146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PATJ divergent transcript","termid":"PBO:0063146"}


id: PBO:0080082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 44","termid":"PBO:0080082"}


id: GO:0042338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Synthesis and deposition of a collagen and cuticulin-based noncellular, hardened, or membranous secretion from an epithelial sheet, occurring as part of the molting cycle. An example of this process is found in Caenorhabditis elegans.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"collagen and cuticulin-based cuticle development","termid":"GO:0040002"},{"relation_name":"part_of","term_name":"molting cycle, collagen and cuticulin-based cuticle","termid":"GO:0018996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cuticle development involved in collagen and cuticulin-based cuticle molting cycle","synonyms":[{"name":"collagen and cuticulin-based cuticle development during molting","type":"related"},{"name":"cuticle anabolism during molting","type":"broad"},{"name":"cuticle biosynthetic process during molting","type":"broad"},{"name":"cuticle formation during molting","type":"broad"},{"name":"cuticle synthesis during molting","type":"broad"}],"termid":"GO:0042338"}


id: MONDO:0013287
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal agammaglobulinemia in which the cause of the disease is a mutation in the IGLL1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal agammaglobulinemia","termid":"MONDO:0011096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"agammaglobulinemia 2, autosomal recessive","secondary_identifiers":["DOID:0081135","DOID:0060024","MEDGEN:462100","OMIM:613500","UMLS:C3150750","GARD:15672"],"synonyms":[{"name":"AGM2","type":"exact"},{"name":"IGLL1 autosomal agammaglobulinemia","type":"exact"},{"name":"agammaglobulinemia 2, autosomal recessive","type":"exact"},{"name":"agammaglobulinemia, autosomal recessive, due to IGLL1 defect","type":"exact"},{"name":"autosomal agammaglobulinemia caused by mutation in IGLL1","type":"exact"},{"name":"lambda 5 deficiency","type":"exact"}],"termid":"MONDO:0013287","xrefs":{"Monarch":{"xref_id":"0013287"}}}


id: PBO:0041867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 14","termid":"PBO:0041867"}


id: GO:0007270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of synaptic transmission from a neuron to another neuron across a synapse.","definition_xrefs":["GOC:add","GOC:dos","MeSH:D009435","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemical synaptic transmission","termid":"GO:0007268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"neuron-neuron synaptic transmission","synonyms":[{"name":"nerve-nerve synaptic transmission","type":"related"}],"termid":"GO:0007270"}


id: PBO:0048965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosylphosphatidylinositol anchor attachment 1","termid":"PBO:0048965"}


id: GO:0102963
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + (S)-reticulinium(1+) + NADPH + O2 = (S)-corytuberine + NADP + 2 H2O.","definition_xrefs":["RHEA:51540","PMID:18230623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"(S)-corytuberine synthase activity","secondary_identifiers":["EC:1.14.19.51","MetaCyc:RXN-9314"],"termid":"GO:0102963"}


id: PBO:0017538
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor suppressor syndrome","termid":"PBO:0017538"}


id: PBO:0074867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 51","termid":"PBO:0074867"}


id: MONDO:0004581
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete localized scleroderma (obsolete MONDO:0004581)","termid":"MONDO:0004581","xrefs":{"Monarch":{"xref_id":"0004581"}}}


id: GO:0051287
data:
  {"annotated_genes":["SJAG_04652","SJAG_02135","SJAG_01137","SJAG_04186","SJAG_03152","SJAG_00502","SJAG_02313","SJAG_02176","SJAG_04362","SJAG_00409","SJAG_01432","SJAG_00027","SJAG_03562","SJAG_06622","SJAG_00235","SJAG_00234","SJAG_00281","SJAG_06621","SJAG_01075","SJAG_02945","SJAG_03903","SJAG_01012","SJAG_03828","SJAG_00636","SJAG_04039"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58342,59263,60654,61630,62456,63581,63759,63869,64266,64452,65507,65986,70818,71350,71462,111252,111253,111256,111257,120662],"is_not":false,"summary":null,"term":"GO:0051287"},{"annotations":[80487,58607,60541,113828,67275],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070403"}]},"cv_name":"molecular_function","definition":"Binding to nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD+, or the reduced form, NADH.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenyl nucleotide binding","termid":"GO:0030554"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00234":null,"SJAG_00235":null,"SJAG_00281":null,"SJAG_00409":null,"SJAG_00502":null,"SJAG_00636":null,"SJAG_01012":null,"SJAG_01075":null,"SJAG_01137":null,"SJAG_01432":null,"SJAG_02135":null,"SJAG_02176":null,"SJAG_02313":null,"SJAG_02945":null,"SJAG_03152":null,"SJAG_03562":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_04039":null,"SJAG_04186":null,"SJAG_04362":null,"SJAG_04652":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"NAD binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0051288"],"synonyms":[{"name":"NAD or NADH binding","type":"related"},{"name":"NAD+ or NADH binding","type":"related"},{"name":"nicotinamide adenine dinucleotide binding","type":"exact"}],"termid":"GO:0051287","terms_by_termid":{"GO:0051287":null,"GO:0070403":null}}


id: GO:1901079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of relaxation of muscle.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of relaxation of muscle","termid":"GO:1901077"},{"relation_name":"positively_regulates","term_name":"relaxation of muscle","termid":"GO:0090075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of relaxation of muscle","synonyms":[{"name":"activation of relaxation of muscle","type":"narrow"},{"name":"up regulation of relaxation of muscle","type":"exact"},{"name":"up-regulation of relaxation of muscle","type":"exact"},{"name":"upregulation of relaxation of muscle","type":"exact"}],"termid":"GO:1901079"}


id: PBO:0002370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II CTD phosphatase Rtr1 (predicted)","termid":"PBO:0002370"}


id: FYPO:0002511
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the palmitoylation of one or more specific proteins, or of specific protein sites, does not occur during one or both meiotic nuclear divisions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein palmitoylation","termid":"FYPO:0002504"},{"relation_name":"is_a","term_name":"abnormal protein palmitoylation during meiosis","termid":"FYPO:0002514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0002494"],"is_obsolete":false,"name":"abolished protein palmitoylation during meiosis","synonyms":[{"name":"abolished protein palmitoylation during meiotic nuclear division","type":"exact"},{"name":"protein palmitoylation abolished during meiosis","type":"exact"},{"name":"protein palmitoylation absent during meiosis","type":"exact"}],"termid":"FYPO:0002511"}


id: MONDO:0022610
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bronchiectasis oligospermia","termid":"MONDO:0022610","xrefs":{"Monarch":{"xref_id":"0022610"}}}


id: PBO:0089526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyamine N-acetyltransferase","termid":"PBO:0089526"}


id: GO:0008427
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of a calcium-dependent protein kinase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium-dependent protein kinase regulator activity","termid":"GO:0010858"},{"relation_name":"is_a","term_name":"protein serine/threonine kinase inhibitor activity","termid":"GO:0030291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0003674","GO:0004857","GO:0140678","GO:0030234","GO:0098772"],"is_obsolete":false,"name":"calcium-dependent protein kinase inhibitor activity","termid":"GO:0008427"}


id: PBO:0024873
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae ERO1","termid":"PBO:0024873"}


id: GO:0004806
data:
  {"annotated_genes":["SJAG_02907","SJAG_02100","SJAG_02089","SJAG_03604","SJAG_02487","SJAG_01036"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58570,60303,71495,73227,95736,100282],"is_not":false,"summary":null,"term":"GO:0004806"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a triacylglycerol + H2O = a diacylglycerol + a fatty acid + H+.","definition_xrefs":["RHEA:12044"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipase activity","termid":"GO:0016298"},{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01036":null,"SJAG_02089":null,"SJAG_02100":null,"SJAG_02487":null,"SJAG_02907":null,"SJAG_03604":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"triacylglycerol lipase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-8848338","MetaCyc:RXN-19278","Reactome:R-HSA-5694109","Reactome:R-HSA-1482777","Reactome:R-HSA-163551","Reactome:R-HSA-8848339","EC:3.1.1.3"],"synonyms":[{"name":"GA 56","type":"related"},{"name":"GEH","type":"related"},{"name":"PPL","type":"related"},{"name":"TAG activity","type":"exact"},{"name":"amano AP","type":"related"},{"name":"amano B","type":"related"},{"name":"amano CE","type":"related"},{"name":"amano CES","type":"related"},{"name":"amano P","type":"related"},{"name":"amno N-AP","type":"related"},{"name":"butyrinase activity","type":"related"},{"name":"cacordase activity","type":"related"},{"name":"capalase L","type":"related"},{"name":"glycerol ester hydrolase activity","type":"related"},{"name":"glycerol-ester hydrolase activity","type":"related"},{"name":"heparin releasable hepatic lipase","type":"narrow"},{"name":"hepatic lipase","type":"narrow"},{"name":"hepatic monoacylglycerol acyltransferase","type":"narrow"},{"name":"lipazin","type":"related"},{"name":"liver lipase","type":"narrow"},{"name":"meito MY 30","type":"related"},{"name":"meito sangyo OF lipase","type":"related"},{"name":"post-heparin plasma protamine-resistant lipase","type":"narrow"},{"name":"salt-resistant post-heparin lipase","type":"narrow"},{"name":"steapsin","type":"related"},{"name":"takedo 1969-4-9","type":"related"},{"name":"triacetinase activity","type":"related"},{"name":"triacylglycerol acylhydrolase activity","type":"related"},{"name":"triacylglycerol ester hydrolase activity","type":"related"},{"name":"tributyrase activity","type":"related"},{"name":"tributyrin esterase activity","type":"related"},{"name":"tributyrinase activity","type":"related"},{"name":"triglyceridase activity","type":"related"},{"name":"triglyceride hydrolase activity","type":"related"},{"name":"triglyceride lipase activity","type":"exact"},{"name":"triolein hydrolase activity","type":"related"},{"name":"tween hydrolase activity","type":"related"},{"name":"tween-hydrolyzing esterase activity","type":"related"},{"name":"tweenase activity","type":"related"},{"name":"tweenesterase activity","type":"related"}],"termid":"GO:0004806","terms_by_termid":{"GO:0004806":null}}


id: MONDO:0019874
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal trisomy 7p is a rare chromosomal anomaly syndrome, resulting from the partial duplication of the short arm of chromosome 7, with highly variable phenotype typically characterized by severe to profound psychomotor delay, intellectual disability, dysmorphic features (incl. dolichocephaly, microbrachycephaly, high and/or broad forehead, large anterior fontanel, hypertelorism, downslanting palpebral fissures, low-set, dysplastic ears, low, broad and prominent nasal bridge, abnormal palate, micro-/retrognathia), and hypotonia. Cardiovascular, gastrointestinal, skeletal and urogenital anomalies have commonly been reported.","definition_xrefs":["Orphanet:96074"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of the short arm of chromosome 7","termid":"MONDO:0016944"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal trisomy 7p","secondary_identifiers":["SCTID:763276000","UMLS:C4706364","MEDGEN:1641655","GARD:19307"],"synonyms":[{"name":"distal duplication 7p","type":"exact"},{"name":"distal trisomy type 7p","type":"exact"},{"name":"telomeric duplication 7p","type":"exact"},{"name":"trisomy 7pter","type":"exact"}],"termid":"MONDO:0019874","xrefs":{"Monarch":{"xref_id":"0019874"}}}


id: FYPO:0001187
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a population reaches stationary phase at, and maintains, a lower cell density than wild type.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"decreased cell density in stationary phase","synonyms":[{"name":"reduced cell density in stationary phase","type":"exact"}],"termid":"FYPO:0001187"}


id: MONDO:0041440
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete functional visual loss (obsolete MONDO:0041440)","secondary_identifiers":["SCTID:313165001"],"synonyms":[{"name":"functional visual loss","type":"exact"},{"name":"nonphysiologic acuity loss","type":"related"},{"name":"nonphysiologic vision loss","type":"related"}],"termid":"MONDO:0041440","xrefs":{"Monarch":{"xref_id":"0041440"}}}


id: PBO:0091623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pdc2-Repressed lncRNA, hry1-antisense","termid":"PBO:0091623"}


id: MONDO:1010562
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acromegaly that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acromegaly, non-human animal","termid":"MONDO:1010049"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acromegaly, dog","secondary_identifiers":["OMIA:000008-9615"],"termid":"MONDO:1010562","xrefs":{"Monarch":{"xref_id":"1010562"}}}


id: GO:0018047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a C-terminal peptidyl-phenylalanine amide by hydrolysis and oxidation of an interior Phe-Gly peptide in a secreted protein.","definition_xrefs":["RESID:AA0094"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal peptidyl-phenylalanine amidation (obsolete GO:0018047)","termid":"GO:0018047"}


id: PBO:0051403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda like polypeptide 3, pseudogene","termid":"PBO:0051403"}


id: MONDO:0001129
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An olfactory neuroblastoma arising in the nasal cavity.","definition_xrefs":["NCIT:C7604"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nasal cavity cancer","termid":"MONDO:0001128"},{"relation_name":"is_a","term_name":"olfactory neuroblastoma","termid":"MONDO:0006329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"nasal cavity olfactory neuroblastoma","secondary_identifiers":["UMLS:C1334923","MEDGEN:233749","DOID:10812"],"synonyms":[{"name":"nasal cavity olfactory neuroblastoma","type":"exact"},{"name":"olfactory neuroblastoma of nasal cavity","type":"exact"},{"name":"olfactory neuroblastoma of the nasal cavity","type":"exact"}],"termid":"MONDO:0001129","xrefs":{"Monarch":{"xref_id":"0001129"}}}


id: MONDO:0017153
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Pulmonary arterial hypertension (PAH) associated with HIV infection (PAH-HIV) is a form of PAH characterized by elevated pulmonary arterial resistance leading to right heart failure observed as a complication of HIV infection.","definition_xrefs":["Orphanet:275808"],"gene_count":0,"genotype_count":0,"name":"obsolete pulmonary arterial hypertension associated with HIV infection (obsolete MONDO:0017153)","secondary_identifiers":["ICD9:416.8","SCTID:697904001"],"synonyms":[{"name":"PAH associated with HIV infaction","type":"exact"}],"termid":"MONDO:0017153","xrefs":{"Monarch":{"xref_id":"0017153"}}}


id: PBO:0084598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YKL158W was originally annotated as an independent ORF, but was later demonstrated to be an exon of an adjacent ORF, YKL157W","termid":"PBO:0084598"}


id: PBO:0060858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIMA related kinase 4","termid":"PBO:0060858"}


id: PBO:0027306
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_chromatin_at_tRNA_genes","termid":"PBO:0027306"}


id: PBO:0116640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF interacting protein 1","termid":"PBO:0116640"}


id: PBO:0075577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindlin interactor and repressor of chromatin binding","termid":"PBO:0075577"}


id: MONDO:0024534
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Dowling-Degos disease in which the cause of the disease is a mutation in the KRT5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Dowling-Degos disease","termid":"MONDO:0008371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"Dowling-Degos disease 1","secondary_identifiers":["MEDGEN:1645697","UMLS:C4552092","OMIM:179850"],"synonyms":[{"name":"DDD","type":"related"},{"name":"DDD1","type":"related"},{"name":"Dowling-Degos disease 1","type":"exact"},{"name":"Dowling-Degos disease caused by mutation in KRT5","type":"exact"},{"name":"KRT5 Dowling-Degos disease","type":"exact"},{"name":"reticular pigment anomaly of flexures","type":"related"}],"termid":"MONDO:0024534","xrefs":{"Monarch":{"xref_id":"0024534"}}}


id: MONDO:0016852
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome X disorder","termid":"MONDO:0700027"},{"relation_name":"is_a","term_name":"uniparental disomy","termid":"MONDO:0700086"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paternal uniparental disomy of chromosome X","secondary_identifiers":["GARD:20784","icd11.foundation:444322860","MEDGEN:1683101","UMLS:C5191049","Orphanet:261524"],"synonyms":[{"name":"UPD(X)pat","type":"exact"},{"name":"paternal uniparental disomy of chromosome type X","type":"exact"}],"termid":"MONDO:0016852","xrefs":{"Monarch":{"xref_id":"0016852"}}}


id: PBO:0071138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 1","termid":"PBO:0071138"}


id: PBO:0069271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 527, pseudogene","termid":"PBO:0069271"}


id: PR:000044737
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase II subunit rpb1 (Schizosaccharomyces pombe) that has been post-translationally modified to include phosphoserine at position 5 of one or more C-terminal heptad repeats (YSPTSPS).","definition_xrefs":["PomBase:VW","PRO:DAN","PMID:28367989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-directed RNA polymerase II subunit rpb1 (Schizosaccharomyces pombe)","termid":"PR:000044736"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rpb1/Phos(CTD-S5)","pombase_gene_id":"SPBC28F2.12","synonyms":[{"name":"PomBase_original_PRO_term_name: DNA-directed RNA polymerase II subunit rpb1 phosphorylated 3 (Schizosaccharomyces pombe)","type":"exact"},{"name":"S5P-Pol II (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-rpb1/Phos:3","type":"exact"},{"name":"rpb1/Phos(CTD-S5)","type":"exact"}],"termid":"PR:000044737"}


id: PBO:0086355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Purine nucleoside phosphorylase; specifically metabolizes inosine and guanosine nucleosides; involved in the nicotinamide riboside salvage pathway","termid":"PBO:0086355"}


id: PR:Q96WV0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ure7 gene.","definition_xrefs":["UniProtKB:Q96WV0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized urease accessory protein ureG-like (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCPB16A4.05c","synonyms":[{"name":"Spom972h-ure7","type":"exact"}],"termid":"PR:Q96WV0"}


id: PBO:0076348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin 14 pseudogene 1","termid":"PBO:0076348"}


id: PBO:0081679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 600","termid":"PBO:0081679"}


id: PBO:0004985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NiCoT heavy metal ion transporter Nic1","termid":"PBO:0004985"}


id: GO:0019867
data:
  {"annotated_genes":["SJAG_00569","SJAG_03175","SJAG_02641","SJAG_03515","SJAG_03415","SJAG_05259","SJAG_00428","SJAG_04759","SJAG_05268","SJAG_03710","SJAG_03416","SJAG_04370","SJAG_01212","SJAG_04072","SJAG_03502","SJAG_01260","SJAG_00999","SJAG_04996","SJAG_02265","SJAG_01305","SJAG_03328","SJAG_02848","SJAG_00031","SJAG_00699","SJAG_01357","SJAG_01780","SJAG_01312","SJAG_02543","SJAG_02361","SJAG_02084","SJAG_00754","SJAG_03435","SJAG_00235","SJAG_04203","SJAG_01134","SJAG_00810","SJAG_03358","SJAG_01900","SJAG_00655","SJAG_04732","SJAG_00948","SJAG_00880","SJAG_00368","SJAG_00812","SJAG_01929","SJAG_03464","SJAG_02355","SJAG_04270","SJAG_01951","SJAG_00265","SJAG_00605","SJAG_00048","SJAG_03345"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91065,106642,117630],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0036266"},{"annotations":[107627,117631,106643,107757,119542,106288,108419,91068,102345,101070,103163,97910,104325],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032473"},{"annotations":[71726,71683,76510,81816,118475],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032865"},{"annotations":[109046],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031315"},{"annotations":[113645,112256],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140595"},{"annotations":[76426,72659,73427,93724,74187,93960,97257,75307,106179,104278,119448,103287,106439,90860,107819,104584,111132,120657,74613,90042,93754,109542],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005741"},{"annotations":[90340],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005640"},{"annotations":[62628,71682,92184,75119],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0001401"},{"annotations":[109401,109424,101355,92705,108004,101240],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140596"}]},"cv_name":"cellular_component","definition":"The external membrane of Gram-negative bacteria or certain organelles such as mitochondria and chloroplasts; freely permeable to most ions and metabolites.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane","termid":"GO:0016020"}],"gene_count":53,"genes_by_uniquename":{"SJAG_00031":null,"SJAG_00048":null,"SJAG_00235":null,"SJAG_00265":null,"SJAG_00368":null,"SJAG_00428":null,"SJAG_00569":null,"SJAG_00605":null,"SJAG_00655":null,"SJAG_00699":null,"SJAG_00754":null,"SJAG_00810":null,"SJAG_00812":null,"SJAG_00880":null,"SJAG_00948":null,"SJAG_00999":null,"SJAG_01134":null,"SJAG_01212":null,"SJAG_01260":null,"SJAG_01305":null,"SJAG_01312":null,"SJAG_01357":null,"SJAG_01780":null,"SJAG_01900":null,"SJAG_01929":null,"SJAG_01951":null,"SJAG_02084":null,"SJAG_02265":null,"SJAG_02355":null,"SJAG_02361":null,"SJAG_02543":null,"SJAG_02641":null,"SJAG_02848":null,"SJAG_03175":null,"SJAG_03328":null,"SJAG_03345":null,"SJAG_03358":null,"SJAG_03415":null,"SJAG_03416":null,"SJAG_03435":null,"SJAG_03464":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_03710":null,"SJAG_04072":null,"SJAG_04203":null,"SJAG_04270":null,"SJAG_04370":null,"SJAG_04732":null,"SJAG_04759":null,"SJAG_04996":null,"SJAG_05259":null,"SJAG_05268":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"outer membrane","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0019867","terms_by_termid":{"GO:0001401":null,"GO:0005640":null,"GO:0005741":null,"GO:0031315":null,"GO:0032473":null,"GO:0032865":null,"GO:0036266":null,"GO:0140595":null,"GO:0140596":null}}


id: GO:1902699
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of pentose to acetate.","definition_xrefs":["GOC:mengo_curators","PMID:19539744","GO_REF:0000093","PMID:18727018","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete pentose catabolic process to acetate (obsolete GO:1902699)","synonyms":[{"name":"acidogenesis","type":"broad"},{"name":"pentose breakdown to acetate","type":"exact"},{"name":"pentose catabolism to acetate","type":"exact"},{"name":"pentose degradation to acetate","type":"exact"}],"termid":"GO:1902699"}


id: PR:Q9US43
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- urg2 gene.","definition_xrefs":["UniProtKB:Q9US43","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uracil phosphoribosyltransferase urg2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.17c","synonyms":[{"name":"Spom972h-urg2","type":"exact"},{"name":"UMP pyrophosphorylase urg2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"UPRTase urg2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9US43"}


id: GO:0043736
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of alkylated DNA; recognizes and removes both N-3- and N-7-methyl purines by cleaving the N-C1' glycosidic bond between the target damaged DNA base and the deoxyribose sugar. The reaction releases a free base and leaves an apurinic (AP) site.","definition_xrefs":["PMID:10375529"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA-3-methyladenine glycosylase IV activity (obsolete GO:0043736)","synonyms":[{"name":"DNA-3-methyladenine glycosylase IV activity","type":"exact"},{"name":"Mpg II","type":"narrow"},{"name":"MpgII","type":"narrow"}],"termid":"GO:0043736"}


id: PBO:0086478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative mitochondrial protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; IAI11 has a paralog, YER093C-A, that arose from the whole genome duplication","termid":"PBO:0086478"}


id: PBO:0042992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHEK2 pseudogene 5","termid":"PBO:0042992"}


id: GO:0006713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glucocorticoids, hormonal C21 corticosteroids synthesized from cholesterol.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid catabolic process","termid":"GO:0006706"},{"relation_name":"is_a","term_name":"glucocorticoid metabolic process","termid":"GO:0008211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"glucocorticoid catabolic process","synonyms":[{"name":"glucocorticoid breakdown","type":"exact"},{"name":"glucocorticoid catabolism","type":"exact"},{"name":"glucocorticoid degradation","type":"exact"}],"termid":"GO:0006713"}


id: PBO:0026631
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_establishment_of_mitotic_sister_chromatid_cohesion","termid":"PBO:0026631"}


id: FYPO:0005877
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize glutamate, and therefore requires glutamate in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"growth auxotrophic for glutamate","synonyms":[{"name":"glutamate auxotrophy","type":"exact"},{"name":"growth auxotrophic for glutamate during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for glutamate during vegetative growth","type":"exact"},{"name":"growth auxotrophic for glutamic acid","type":"exact"}],"termid":"FYPO:0005877"}


id: PBO:0076905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 261","termid":"PBO:0076905"}


id: PR:Q9Y7T0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DnaJ homolog subfamily C member 11 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04469","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized J domain-containing protein C63.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC63.03","secondary_identifiers":["UniProtKB:Q9Y7T0"],"synonyms":[{"name":"Spom972h-DNAJC11","type":"exact"}],"termid":"PR:Q9Y7T0"}


id: GO:0044347
data:
  {"annotated_genes":["SJAG_01017","SJAG_00667"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95831,101970],"is_not":false,"summary":null,"term":"GO:0044347"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cell wall polysaccharides.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide catabolic process","termid":"GO:0000272"},{"relation_name":"is_a","term_name":"cell wall polysaccharide metabolic process","termid":"GO:0010383"},{"relation_name":"is_a","term_name":"cell wall macromolecule catabolic process","termid":"GO:0016998"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00667":null,"SJAG_01017":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0071554","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"cell wall polysaccharide catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cell wall polysaccharide breakdown","type":"exact"}],"termid":"GO:0044347","terms_by_termid":{"GO:0044347":null}}


id: MONDO:0008974
data:
  {"annotated_genes":["SJAG_04810"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87846],"is_not":false,"summary":null,"term":"MONDO:0008974"}]},"cv_name":"mondo","definition":"A very rare lethal skeletal dysplasia characterized by fetal hydrops, short limbs and abnormal chondro-osseous calcification. The disease is characterized by early in utero lethality and affected fetuses are considered as nonviable.","definition_xrefs":["Orphanet:1426"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol biosynthesis disorder","termid":"MONDO:0019240"},{"relation_name":"is_a","term_name":"chondrodysplasia punctata","termid":"MONDO:0019701"},{"relation_name":"is_a","term_name":"laminopathy","termid":"MONDO:0021106"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04810":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"Greenberg dysplasia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:215140","MEDGEN:418969","DOID:0111588","GARD:8754","SCTID:389261002","icd11.foundation:1858458540","NANDO:2201361","UMLS:C2931048","MESH:C535858"],"synonyms":[{"name":"GRBGD","type":"related"},{"name":"Greenberg dysplasia","type":"exact"},{"name":"Greenberg skeletal dysplasia","type":"related"},{"name":"autosomal recessive lethal chondrodystrophy with congenital hydrops","type":"related"},{"name":"chondrodystrophy, hydropic and prenatally lethal type","type":"related"},{"name":"hem","type":"related"},{"name":"hem dysplasia","type":"exact"},{"name":"hem skeletal dysplasia","type":"related"},{"name":"hem/Greenberg dysplasia","type":"related"},{"name":"hydrops, ectopic calcification, moth-eaten skeletal dysplasia","type":"related"},{"name":"hydrops-ectopic calcification-moth-eaten skeletal dysplasia","type":"related"},{"name":"hydrops-ectopic calcification-motheaten syndrome","type":"exact"},{"name":"moth-eaten skeletal dysplasia","type":"related"},{"name":"skeletal dysplasia, Greenberg type","type":"exact"}],"termid":"MONDO:0008974","terms_by_termid":{"MONDO:0008974":null},"xrefs":{"Monarch":{"xref_id":"0008974"}}}


id: PBO:0086311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with rhodanese activity; contains a rhodanese-like domain similar to Rdl1p, Uba4p, Tum1p, and Ych1p; overexpression causes a cell cycle delay; null mutant displays elevated frequency of mitochondrial genome loss","termid":"PBO:0086311"}


id: GO:0033052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cyanoamino acids, amino acid derivatives that contain a cyanide group.","definition_xrefs":["PMID:11575729","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrile metabolic process","termid":"GO:0050898"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"cyanoamino acid metabolic process","synonyms":[{"name":"cyanoamino acid metabolism","type":"exact"}],"termid":"GO:0033052"}


id: FYPO:0006971
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of biotin measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular biotin level","synonyms":[{"name":"decreased cellular biotin level during mitotic cell cycle","type":"related"},{"name":"decreased cellular biotin level during vegetative growth","type":"exact"},{"name":"reduced cellular biotin level","type":"exact"}],"termid":"FYPO:0006971"}


id: GO:0045271
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Respiratory chain complex I is an enzyme of the respiratory chain. It consists of several polypeptide chains and is L-shaped, with a horizontal arm lying in the membrane and a vertical arm that projects into the matrix. The electrons of NADH enter the chain at this complex.","definition_xrefs":["ISBN:0716749556","GOC:imk","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NADH dehydrogenase complex","termid":"GO:0030964"},{"relation_name":"is_a","term_name":"respiratory chain complex","termid":"GO:0098803"},{"relation_name":"is_a","term_name":"transmembrane transporter complex","termid":"GO:1902495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"respiratory chain complex I","secondary_identifiers":["GO:0045279"],"synonyms":[{"name":"NADH dehydrogenase (ubiquinone) complex","type":"exact"},{"name":"NADH dehydrogenase complex (ubiquinone)","type":"exact"},{"name":"NADH-Q oxidoreductase complex","type":"exact"},{"name":"electron transport complex I","type":"related"}],"termid":"GO:0045271"}


id: MONDO:0011903
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant Charcot-Marie-Tooth disease type 2J (CMT2J) is a form of axonal Charcot-Marie-Tooth disease, a peripheral sensorimotor neuropathy, characterized by a relatively late onset, pupillary abnormalities and deafness, in most patients, associated with distal weakness and muscle atrophy.","definition_xrefs":["Orphanet:99943"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease dominant intermediate D","termid":"MONDO:0011909"},{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 2","termid":"MONDO:0018993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease type 2J","secondary_identifiers":["icd11.foundation:1498789307","MEDGEN:375107","SCTID:717014003","GARD:9198","OMIM:607736","DOID:0110157","UMLS:C1843153","MESH:C535417"],"synonyms":[{"name":"CMT 2J","type":"related"},{"name":"CMT2J","type":"exact"},{"name":"Charcot Marie Tooth disease type 2J","type":"related"},{"name":"Charcot-Marie-Tooth disease type 2 with hearing loss and pupillary abnormalities","type":"exact"},{"name":"Charcot-Marie-Tooth disease, axonal, type 2J","type":"related"},{"name":"Charcot-Marie-Tooth disease, type 2, with hearing loss and pupillary abnormalities","type":"related"},{"name":"Charcot-Marie-Tooth disease, type 2J","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy type 2J","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, type 2J","type":"related"},{"name":"autosomal dominant Charcot-Marie-Tooth disease type 2J","type":"related"}],"termid":"MONDO:0011903","xrefs":{"Monarch":{"xref_id":"0011903"}}}


id: GO:0032833
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of differentiation of CD4-positive, CD25-positive, alpha-beta regulatory T cells as part of an immune response.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune effector process","termid":"GO:0002698"},{"relation_name":"is_a","term_name":"negative regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation","termid":"GO:0032830"},{"relation_name":"is_a","term_name":"regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation involved in immune response","termid":"GO:0032832"},{"relation_name":"is_a","term_name":"negative regulation of immune response","termid":"GO:0050777"},{"relation_name":"negatively_regulates","term_name":"CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation involved in immune response","termid":"GO:0002298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation involved in immune response","synonyms":[{"name":"down regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation during immune response","type":"related"},{"name":"down-regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation during immune response","type":"related"},{"name":"downregulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation during immune response","type":"related"},{"name":"inhibition of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation during immune response","type":"narrow"},{"name":"negative regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell development involved in immune response","type":"related"},{"name":"negative regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation during immune response","type":"related"},{"name":"negative regulation of CD4-positive, CD25-positive, alpha-beta regulatory T lymphocyte differentiation during immune response","type":"related"},{"name":"negative regulation of CD4-positive, CD25-positive, alpha-beta regulatory T-cell differentiation during immune response","type":"related"},{"name":"negative regulation of CD4-positive, CD25-positive, alpha-beta regulatory T-lymphocyte differentiation during immune response","type":"related"}],"termid":"GO:0032833"}


id: PBO:0059619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 31","termid":"PBO:0059619"}


id: PBO:0052924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 19-7","termid":"PBO:0052924"}


id: PBO:0002461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-like protein Cut7","termid":"PBO:0002461"}


id: PBO:0074948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 111B","termid":"PBO:0074948"}


id: GO:2000827
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The set of processes involved in identifying and degrading defective or aberrant RNAs that takes place in the mitochondrion.","definition_xrefs":["PMID:19864255"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial RNA catabolic process","termid":"GO:0000957"},{"relation_name":"is_a","term_name":"cytoplasmic RNA surveillance","termid":"GO:0071026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mitochondrial RNA surveillance","synonyms":[{"name":"RNA quality control in mitochondria","type":"exact"},{"name":"RNA quality control in mitochondrion","type":"exact"},{"name":"RNA surveillance in mitochondria","type":"exact"},{"name":"aberrant RNA catabolic process in mitochondria","type":"exact"},{"name":"aberrant RNA catabolic process in mitochondrion","type":"exact"}],"termid":"GO:2000827"}


id: GO:0045181
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2 L-glutamate + NAD(P)+ = L-glutamine + 2-oxoglutarate + NAD(P)H + H+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete glutamate synthase activity, NAD(P)H as acceptor (obsolete GO:0045181)","synonyms":[{"name":"glutamate synthase activity, NADH or NADPH as acceptor","type":"related"}],"termid":"GO:0045181"}


id: FYPO:0001853
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription does not occur when the cell is subject to iron ion starvation. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished transcription during vegetative growth","termid":"FYPO:0001443"},{"relation_name":"is_a","term_name":"decreased transcription during iron starvation","termid":"FYPO:0001852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000294","FYPO:0006551","FYPO:0001320"],"is_obsolete":false,"name":"abolished transcription during iron starvation","synonyms":[{"name":"abolished transcription during iron depletion","type":"exact"},{"name":"abolished transcription during iron deprivation","type":"exact"},{"name":"abolished transcription during iron ion starvation","type":"exact"},{"name":"abolished transcription during iron starvation during mitotic cell cycle","type":"related"},{"name":"abolished transcription during iron starvation during vegetative growth","type":"exact"},{"name":"transcription abolished during iron starvation","type":"exact"}],"termid":"FYPO:0001853"}


id: GO:1905696
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of polysome binding.","definition_xrefs":["PMID:18426977","GOC:PARL","GOC:bc","GO_REF:0000059","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of polysome binding (obsolete GO:1905696)","synonyms":[{"name":"regulation of polyribosome binding","type":"exact"}],"termid":"GO:1905696"}


id: PBO:0113236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-catalytic beta subunit of the oligosaccharyltransferase (OST) complex; the OST complex catalyzes N-linked glycosylation of newly synthesized proteins in the ER; forms a pocket with Ost2p involved in binding terminal glucose units of the donor glycan; human homolog DDOST can complement yeast growth defect during down-regulation of the yeast gene","termid":"PBO:0113236"}


id: PBO:0003062
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.4.8","termid":"PBO:0003062"}


id: GO:0070504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a prosthetic group that contains selenium, as in the selenium-dependent molybdenum hydroxylases. The selenium atom in the prosthetic group is required for enzymatic function but is labile to a variety of treatments.","definition_xrefs":["GOC:dh","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prosthetic group biosynthetic process","termid":"GO:0051191"},{"relation_name":"is_a","term_name":"selenium-containing prosthetic group metabolic process","termid":"GO:0070503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"selenium-containing prosthetic group biosynthetic process","synonyms":[{"name":"selenium-containing prosthetic group anabolism","type":"exact"},{"name":"selenium-containing prosthetic group biosynthesis","type":"exact"},{"name":"selenium-containing prosthetic group formation","type":"exact"},{"name":"selenium-containing prosthetic group synthesis","type":"exact"}],"termid":"GO:0070504"}


id: PBO:0049602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 5","termid":"PBO:0049602"}


id: GO:0031882
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 5 somatostatin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatostatin receptor binding","termid":"GO:0031877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"type 5 somatostatin receptor binding","synonyms":[{"name":"type 5 somatostatin receptor ligand","type":"narrow"}],"termid":"GO:0031882"}


id: PBO:0116783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"winged helix repair factor 1","termid":"PBO:0116783"}


id: FYPO:0001830
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing gluconate as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0002057","FYPO:0002058","FYPO:0002060","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"decreased cell population growth on gluconate carbon source","synonyms":[{"name":"decreased growth on gluconate carbon source","type":"broad"},{"name":"decreased vegetative cell growth on gluconate carbon source","type":"exact"},{"name":"reduced cell growth on gluconate carbon source","type":"exact"},{"name":"slow cell growth on gluconate carbon source","type":"narrow"}],"termid":"FYPO:0001830"}


id: PBO:0063951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolactin induced protein","termid":"PBO:0063951"}


id: PBO:0002039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xylose and arabinose reductase (predicted)","termid":"PBO:0002039"}


id: PATO:0000167
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A limited, often assigned period of activity.","definition_xrefs":["answers.com:answers.com"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000167 bouts (obsolete PATO:0000167)","termid":"PATO:0000167"}


id: MONDO:0004822
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Segmental, irreversible dilation of the bronchial tree resulting in the accumulation of secretions which leads to obstruction. The most common cause is bacterial infection.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bronchial disorder","termid":"MONDO:0001358"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"chronic obstructive pulmonary disease","termid":"MONDO:0005002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bronchiectasis","secondary_identifiers":["icd11.foundation:1935524933","MESH:D001987","SCTID:12295008","ICD9:494","DOID:9563","MEDGEN:14234","ICD10CM:J47","NANDO:2100036","NCIT:C84475","NANDO:2200206","OMIMPS:211400","UMLS:C0006267"],"synonyms":[{"name":"Polynesian bronchiectasis","type":"exact"}],"termid":"MONDO:0004822","xrefs":{"Monarch":{"xref_id":"0004822"}}}


id: GO:0052840
data:
  {"annotated_genes":["SJAG_01154"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77831],"is_not":false,"summary":null,"term":"GO:0052840"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: diphospho-1D-myo-inositol tetrakisphosphate + H2O = 1D-myo-inositol pentakisphosphate + phosphate.","definition_xrefs":["PMID:10827188","PMID:11502751"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diphosphoinositol-polyphosphate diphosphatase activity","termid":"GO:0008486"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01154":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"inositol diphosphate tetrakisphosphate diphosphatase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-1855166","MetaCyc:RXN-10963"],"termid":"GO:0052840","terms_by_termid":{"GO:0052840":null}}


id: MONDO:0957991
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary dyskinesia, primary, 53","secondary_identifiers":["OMIM:620642","UMLS:C5882728","MEDGEN:1851509"],"termid":"MONDO:0957991","xrefs":{"Monarch":{"xref_id":"0957991"}}}


id: PBO:0042431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC37L1 divergent transcript","termid":"PBO:0042431"}


id: GO:0002779
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of an antibacterial peptide from a cell or a tissue.","definition_xrefs":["GOC:add","ISBN:0781735149","PMID:15638771","PMID:11807545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antimicrobial peptide secretion","termid":"GO:0002776"},{"relation_name":"part_of","term_name":"antibacterial peptide production","termid":"GO:0002778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0010467","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"antibacterial peptide secretion","termid":"GO:0002779"}


id: PBO:0068160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 467","termid":"PBO:0068160"}


id: GO:0062245
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The inner of the two endoplasmic reticulum-derived lipid bilayer membranes that bound a double membrane vesicle viral factory.","definition_xrefs":["PMID:22440839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"double membrane vesicle viral factory membrane","termid":"GO:0062242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"double membrane vesicle viral factory inner membrane","synonyms":[{"name":"inner membrane of double membrane vesicle viral factory","type":"exact"}],"termid":"GO:0062245"}


id: GO:0009557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an uncellularized nucleus cellularizes and acquires the specialized features of an antipodal cell.","definition_xrefs":["GOC:jid","GOC:mtg_plant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"megagametogenesis","termid":"GO:0009561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antipodal cell differentiation","termid":"GO:0009557"}


id: GO:0097488
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a multivesicular body internal vesicle.","definition_xrefs":["GOC:pde","PMID:21183070"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle membrane","termid":"GO:0030659"},{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"multivesicular body, internal vesicle","termid":"GO:0097487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575","GO:0005768"],"is_obsolete":false,"name":"multivesicular body, internal vesicle membrane","termid":"GO:0097488"}


id: MOD:00949
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:01933. Remap to MOD:01933.","definition_xrefs":["DeltaMass:0"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00949 desmosine (obsolete MOD:00949)","termid":"MOD:00949"}


id: MONDO:0017008
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndrome caused by partial chromosomal duplication","termid":"MONDO:0000762"},{"relation_name":"is_a","term_name":"chromosome X disorder","termid":"MONDO:0700027"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of chromosome X","secondary_identifiers":["Orphanet:263768","UMLS:C5679687","GARD:20916","MEDGEN:1825971"],"synonyms":[{"name":"partial duplication of chromosome type X","type":"exact"},{"name":"partial trisomy of chromosome X","type":"exact"}],"termid":"MONDO:0017008","xrefs":{"Monarch":{"xref_id":"0017008"}}}


id: PBO:0111739
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dh repeats","termid":"PBO:0111739"}


id: PBO:0046530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoplasmic reticulum lumenal protein 29 pseudogene 1","termid":"PBO:0046530"}


id: PATO:0005020
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering on a bearer by virtue of a bearer's shape lacking in pattern or uniformity; for example, it may have sides of different lengths, different curvatures, or unequal angles.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"irregularly shaped","termid":"PATO:0005020"}


id: PBO:0030777
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_sodium_dodecyl_sulfate","termid":"PBO:0030777"}


id: PBO:0002958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FEN-1 endonuclease Rad2","termid":"PBO:0002958"}


id: GO:0003408
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of the optic cup, a two-walled vesicle formed from the optic vesicle.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"optic cup morphogenesis involved in camera-type eye development","termid":"GO:0002072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"optic cup formation involved in camera-type eye development","termid":"GO:0003408"}


id: PBO:0088464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER UDP-N-acetylglucosamine transmembrane transporter","termid":"PBO:0088464"}


id: GO:0016286
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of potassium by a channel with a unit conductance of 2 to 20 picoSiemens that opens in response to stimulus by internal calcium ions. Small conductance calcium-activated potassium channels are more sensitive to calcium than are large conductance calcium-activated potassium channels. Transport by a channel involves catalysis of facilitated diffusion of a solute (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel, without evidence for a carrier-mediated mechanism.","definition_xrefs":["GOC:mtg_transport","OMIM:602754"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium-activated potassium channel activity","termid":"GO:0015269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"small conductance calcium-activated potassium channel activity","synonyms":[{"name":"SK KCa channels","type":"exact"},{"name":"SK calcium-activated potassium channel activity","type":"exact"},{"name":"small conductance KCa channels","type":"exact"}],"termid":"GO:0016286"}


id: MONDO:0002147
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Coffin-Siris syndrome (obsolete MONDO:0002147)","termid":"MONDO:0002147","xrefs":{"Monarch":{"xref_id":"0002147"}}}


id: PBO:0067805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 107","termid":"PBO:0067805"}


id: PR:O60184
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ssn6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcriptional corepressor ssn6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC23E6.09","synonyms":[{"name":"Spom972h-ssn6","type":"exact"}],"termid":"PR:O60184"}


id: GO:0046547
data:
  {"annotated_genes":["SJAG_02973"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96498],"is_not":false,"summary":null,"term":"GO:0046547"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine(1+) + trans-aconitate = (E)-2-(methoxycarbonylmethyl)but-2-enedioate + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.145","RHEA:22200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02973":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"trans-aconitate 3-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R05764","MetaCyc:2.1.1.145-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:(E)-prop-1-ene-1,2,3-tricarboxylate 3'-O-methyltransferase activity","type":"related"}],"termid":"GO:0046547","terms_by_termid":{"GO:0046547":null}}


id: PBO:0120102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clathrin-coated vesicle component, regulator of endocytosis; subunit of the DSC ubiquitin ligase complex; involved in the endosome and Golgi-associated degradation pathway (EGAD), contributing to proteostasis and lipid homeostasis; required for efficient clathrin-mediated endocytosis; UBX (ubiquitin regulatory X) domain-containing protein that interacts with Cdc48p; ortholog of fission yeast dsc5","termid":"PBO:0120102"}


id: PBO:0027904
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_degradation_during_mitosis","termid":"PBO:0027904"}


id: PR:Q9P7T9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC977.17 gene.","definition_xrefs":["UniProtKB:Q9P7T9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C977.17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC977.17","synonyms":[{"name":"Spom972h-SPAC977.17","type":"exact"}],"termid":"PR:Q9P7T9"}


id: GO:0043577
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of an organism, or part of an organism, in response to an external chemical gradient, usually toward or away from it.","definition_xrefs":["PMID:10087613","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tropism","termid":"GO:0009606"},{"relation_name":"part_of","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemotropism","secondary_identifiers":["Wikipedia:Chemotropism"],"termid":"GO:0043577"}


id: GO:0052386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A type of cell wall modification in which the cell wall is reinforced and made thicker.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall modification","termid":"GO:0042545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0071554","GO:0008150"],"is_obsolete":false,"name":"cell wall thickening","termid":"GO:0052386"}


id: GO:0003992
data:
  {"annotated_genes":["SJAG_01019"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[63236],"is_not":false,"summary":null,"term":"GO:0003992"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + N(2)-acetyl-L-ornithine = N-acetyl-L-glutamate 5-semialdehyde + L-glutamate.","definition_xrefs":["RHEA:18049","EC:2.6.1.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01019":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016769"],"is_obsolete":false,"name":"N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["MetaCyc:ACETYLORNTRANSAM-RXN","GO:0047318","KEGG_REACTION:R02283"],"synonyms":[{"name":"2-N-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity","type":"related"},{"name":"ACOAT activity","type":"related"},{"name":"N(2)-acetylornithine 5-transaminase activity","type":"related"},{"name":"N-acetylornithine aminotransferase activity","type":"related"},{"name":"N-acetylornithine-delta-transaminase activity","type":"related"},{"name":"N2-acetyl-L-ornithine:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"N2-acetylornithine 5-aminotransferase activity","type":"exact"},{"name":"N2-acetylornithine 5-transaminase activity","type":"related"},{"name":"acetylornithine 5-aminotransferase activity","type":"related"},{"name":"acetylornithine aminotransferase activity","type":"broad"},{"name":"acetylornithine delta-transaminase activity","type":"related"},{"name":"acetylornithine transaminase activity","type":"broad"},{"name":"succinylornithine aminotransferase activity","type":"broad"}],"termid":"GO:0003992","terms_by_termid":{"GO:0003992":null}}


id: MONDO:0009112
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any rhizomelic chondrodysplasia punctata in which the cause of the disease is a mutation in the GNPAT gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhizomelic chondrodysplasia punctata","termid":"MONDO:0015776"},{"relation_name":"is_a","term_name":"glyceronephosphate O-acyltransferase deficiency","termid":"MONDO:0100273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0019053","MONDO:0002525","MONDO:0005328"],"is_obsolete":false,"name":"rhizomelic chondrodysplasia punctata type 2","secondary_identifiers":["UMLS:C1857242","GARD:9429","NANDO:1200771","DOID:0110852","icd11.foundation:179969811","Orphanet:309796","MESH:C537607","MEDGEN:341734","OMIM:222765"],"synonyms":[{"name":"Dhapat deficiency","type":"exact"},{"name":"Dihydroxyacetonephosphate acyltransferase deficiency","type":"exact"},{"name":"GNPAT rhizomelic chondrodysplasia punctata","type":"exact"},{"name":"Glyceronephosphate O-acyltransferase deficiency","type":"exact"},{"name":"Gnpat deficiency","type":"exact"},{"name":"RCDP2","type":"exact"},{"name":"Rcdp2","type":"exact"},{"name":"chondrodysplasia punctata, rhizomelic, due to Dihydroxyacetonephosphate acyltransferase deficiency","type":"exact"},{"name":"chondrodysplasia punctata, rhizomelic, due to dihydroxyacetonephosphate","type":"related"},{"name":"peroxisomal dihydroxyacetonephosphate acyltransferase deficiency","type":"exact"},{"name":"rhizomelic chondrodysplasia punctata caused by mutation in GNPAT","type":"exact"},{"name":"rhizomelic chondrodysplasia punctata type 2","type":"exact"},{"name":"rhizomelic chondrodysplasia punctata, type 2","type":"exact"},{"name":"type 2 rhizomelic chondrodysplasia punctata","type":"exact"}],"termid":"MONDO:0009112","xrefs":{"Monarch":{"xref_id":"0009112"}}}


id: SO:0001414
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The point within a chromosome where a insertion begins or ends.","definition_xrefs":["SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_breakpoint","termid":"SO:0001021"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insertion_breakpoint","synonyms":[{"name":"insertion breakpoint","type":"exact"}],"termid":"SO:0001414"}


id: MONDO:0007830
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insensitivity to pain with hyperplastic Myelinopathy","secondary_identifiers":["OMIM:147530","UMLS:C1840172","MEDGEN:327046"],"synonyms":[{"name":"insensitivity to pain with hyperplastic Myelinopathy","type":"exact"}],"termid":"MONDO:0007830","xrefs":{"Monarch":{"xref_id":"0007830"}}}


id: FYPO:0002744
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more amino acid transport RNAs measured in a cell is higher than normal (i.e. higher than observed in wild-type cells). Amino acid transport RNAs are transcribed from genes whose products are involved in amino acid transport.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of transport gene mRNA during vegetative growth","termid":"FYPO:0004490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased level of amino acid transport gene mRNA during vegetative growth","synonyms":[{"name":"increased amino acid transport gene mRNA accumulation during vegetative growth","type":"related"},{"name":"increased level of amino acid transport gene RNA during vegetative growth","type":"exact"},{"name":"increased level of amino acid transport gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of amino acid transport gene transcripts during vegetative growth","type":"exact"}],"termid":"FYPO:0002744"}


id: GO:0001897
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process mediated by a symbiont that results in the death of a host cell by means of the rupture of cell membranes and the loss of cytoplasm. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:27405240","PMID:23748204","PMID:24204713","PMID:11423190"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated killing of host cell","termid":"GO:0001907"},{"relation_name":"is_a","term_name":"cytolysis in another organism","termid":"GO:0051715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated cytolysis of host cell","synonyms":[{"name":"cytolysis by organism of host cells","type":"exact"},{"name":"cytolysis by symbiont of host cells","type":"exact"},{"name":"pathogenesis","type":"related"}],"termid":"GO:0001897"}


id: PBO:0038520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily F member 2 pseudogene 2","termid":"PBO:0038520"}


id: MONDO:0008918
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Carnitine-acylcarnitine translocase (CACT) deficiency is a life-threatening, inherited disorder of fatty acid oxidation which usually presents in the neonatal period with severe hypoketotic hypoglycemia, hyperammonemia, cardiomyopathy and/or arrhythmia, hepatic dysfunction, skeletal muscle weakness, and encephalopathy.","definition_xrefs":["Orphanet:159"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hypertrophic cardiomyopathy","termid":"MONDO:0005045"},{"relation_name":"excluded_subClassOf","term_name":"heart disorder","termid":"MONDO:0005267"},{"relation_name":"is_a","term_name":"disorder of fatty acid oxidation and ketogenesis","termid":"MONDO:0017713"},{"relation_name":"is_a","term_name":"disorder of carnitine cycle and carnitine transport","termid":"MONDO:0017716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"carnitine-acylcarnitine translocase deficiency","secondary_identifiers":["DOID:0111585","icd11.foundation:677949122","MESH:C562812","NANDO:1200972","SCTID:238003000","GARD:1123","OMIM:212138","NANDO:2200511","NCIT:C133086","MEDGEN:91000","UMLS:C0342791"],"synonyms":[{"name":"CACT deficiency","type":"exact"},{"name":"CACTD","type":"related"},{"name":"CARNITINE-acylcarnitine translocase deficiency","type":"related"},{"name":"Cact deficiency","type":"related"},{"name":"carnitine-acylcarnitine translocase deficiency","type":"exact"}],"termid":"MONDO:0008918","xrefs":{"Monarch":{"xref_id":"0008918"}}}


id: FYPO:0004296
data:
  {"alleles_by_uniquename":{"SJAG_00118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00118","name":"mid2delta","uniquename":"SJAG_00118:allele-1"},"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_04551:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04551","name":"pmk1delta","uniquename":"SJAG_04551:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[121328],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000118"}],"single_locus_phenotype":[{"annotations":[121138],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004295"},{"annotations":[121317,121318],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000118"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the cell contains one or more septa.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular physical quality phenotype during vegetative growth","termid":"FYPO:0001321"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00118":null,"SJAG_01143":null,"SJAG_04551":null},"genotype_count":4,"genotypes_by_uniquename":{"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__mid2delta":{"display_name":"mid1delta mid2delta","display_uniquename":"mid1delta__mid2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_00118:allele-1","expression":"Null"}]}]},"mid2delta":{"display_name":"mid2delta","display_uniquename":"mid2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00118:allele-1","expression":"Null"}]}]},"pmk1delta":{"display_name":"pmk1delta","display_uniquename":"pmk1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_00118","SJAG_01143"],"name":"septated cell","references_by_uniquename":{"PMID:25866389":null,"PMID:34198697":null},"single_locus_annotated_genes":["SJAG_01143","SJAG_04551","SJAG_00118"],"single_locus_genotype_uniquenames":["pmk1delta","mid2delta","mid1delta"],"synonyms":[{"name":"septum present","type":"exact"}],"termid":"FYPO:0004296","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000207":null,"FYPO:0000118":null,"FYPO:0004295":null,"FYPO_EXT:0000002":null}}


id: MONDO:0015274
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic beryllium disease (CBD) is a granulomatous, interstitial lung disease that occurs in individuals who develop beryllium sensitization (BeS), a cell-mediated immune response to environmental and occupational beryllium exposure. BeS precedes the lung disease that may present with chronic dry cough, fatigue, weight loss, chest pain, and increasing dyspnea.","definition_xrefs":["Orphanet:133"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pneumoconiosis","termid":"MONDO:0015926"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic beryllium disease","secondary_identifiers":["GARD:867","icd11.foundation:212013370","ICD9:503","MESH:D001607","DOID:10322","SCTID:18121009","EFO:0007168","MEDGEN:67440","UMLS:C0221052","MedDRA:10004485"],"synonyms":[{"name":"Beryllliosis","type":"related"},{"name":"Subacute berylliosis","type":"related"},{"name":"acute berylliosis","type":"related"},{"name":"berylliosis","type":"exact"},{"name":"beryllium disease","type":"related"},{"name":"beryllium poisoning","type":"exact"},{"name":"chronic berylliosis","type":"exact"},{"name":"chronic beryllium lung disease","type":"exact"},{"name":"chronic pulmonary berylliosis","type":"related"},{"name":"reversible berylliosis","type":"related"}],"termid":"MONDO:0015274","xrefs":{"Monarch":{"xref_id":"0015274"}}}


id: FYPO:0001956
data:
  {"alleles_by_uniquename":{"SJAG_04703:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04703","name":"for3delta","uniquename":"SJAG_04703:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121064],"is_not":false,"summary":null,"term":"FYPO:0001956"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell is formed in the shape of a sphere.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spheroid cell","termid":"FYPO:0001955"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04703":null},"genotype_count":1,"genotypes_by_uniquename":{"for3delta":{"display_name":"for3delta","display_uniquename":"for3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04703:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000005"],"is_obsolete":false,"name":"spherical cell","references_by_uniquename":{"PMID:30726171":null},"single_locus_annotated_genes":["SJAG_04703"],"single_locus_genotype_uniquenames":["for3delta"],"synonyms":[{"name":"orb","type":"exact"}],"termid":"FYPO:0001956","terms_by_termid":{"FYPO:0001956":null}}


id: GO:0005591
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen heterotrimer containing type VIII alpha chains; [alpha1(VIII)2]alpha2(VIII) and alpha1(VIII)[alpha2(VIII)]2 trimers have been observed; type VIII collagen triple helices associate to form regular hexagonal nets.","definition_xrefs":["ISBN:0721639976","PMID:21421911"],"direct_ancestors":[{"relation_name":"is_a","term_name":"network-forming collagen trimer","termid":"GO:0098642"},{"relation_name":"part_of","term_name":"basement membrane","termid":"GO:0005604"},{"relation_name":"part_of","term_name":"interstitial hexagonal collagen network","termid":"GO:0098646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"collagen type VIII trimer","termid":"GO:0005591"}


id: GO:0140279
data:
  {"annotated_genes":["SJAG_00514","SJAG_03342","SJAG_04468","SJAG_04597","SJAG_04666","SJAG_05290","SJAG_01805","SJAG_03704","SJAG_04776","SJAG_03631","SJAG_01114","SJAG_01188","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104194],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905757"},{"annotations":[94232,91686,107012,115222,119754,117335,79685,108219,108880,95617],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140281"},{"annotations":[96228,89343,94233],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905758"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitotic division septum formation. Division septum formation is the assembly and arrangement of a septum that spans the plasma membrane interface between progeny cells following cytokinesis.","definition_xrefs":["PMID:22786806"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of division septum assembly","termid":"GO:0032955"},{"relation_name":"is_a","term_name":"regulation of mitotic cytokinetic process","termid":"GO:1903436"},{"relation_name":"regulates","term_name":"mitotic division septum assembly","termid":"GO:0140278"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01114":null,"SJAG_01188":null,"SJAG_01805":null,"SJAG_03048":null,"SJAG_03342":null,"SJAG_03631":null,"SJAG_03704":null,"SJAG_04468":null,"SJAG_04597":null,"SJAG_04666":null,"SJAG_04776":null,"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000281"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0000281","GO:0044085","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of mitotic division septum assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of division septum formation involved in mitotic cell cycle","type":"exact"},{"name":"regulation of formation of division septum involved in mitotic cell cycle","type":"exact"},{"name":"regulation of septin assembly and septum biosynthesis involved in mitotic cell cycle","type":"related"},{"name":"regulation of septin assembly and septum formation involved in mitotic cell cycle","type":"related"}],"termid":"GO:0140279","terms_by_termid":{"GO:0140281":null,"GO:1905757":null,"GO:1905758":null}}


id: MONDO:0013199
data:
  {"annotated_genes":["SJAG_00289","SJAG_05346"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88251,88252],"is_not":false,"summary":null,"term":"MONDO:0013199"}]},"cv_name":"mondo","definition":"Tuberous sclerosis mapped to chromosome 16p13.3 (TSC2 gene).","definition_xrefs":["NCIT:C75331"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete tuberous sclerosis complex (obsolete MONDO:0019341)","termid":"MONDO:0019341"},{"relation_name":"is_a","term_name":"tuberous sclerosis","termid":"MONDO:0001734"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00289":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"tuberous sclerosis 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1860707","DOID:0080325","GARD:15640","MEDGEN:348170","MESH:C566021","OMIM:613254"],"synonyms":[{"name":"TSC2","type":"related"},{"name":"TSC2 Angiomyolipomas, renal, modifier of","type":"related"},{"name":"tuberous sclerosis 2","type":"exact"},{"name":"tuberous sclerosis type 2","type":"exact"},{"name":"tuberous sclerosis, type 2","type":"related"},{"name":"tuberous sclerosis-2","type":"exact"}],"termid":"MONDO:0013199","terms_by_termid":{"MONDO:0013199":null},"xrefs":{"Monarch":{"xref_id":"0013199"}}}


id: PBO:0080203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vascular endothelial zinc finger 1 pseudogene 1","termid":"PBO:0080203"}


id: PBO:0068875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 115, pseudogene","termid":"PBO:0068875"}


id: GO:0032108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of a response to nutrient levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to nutrient levels","termid":"GO:0032107"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"negatively_regulates","term_name":"response to nutrient levels","termid":"GO:0031667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of response to nutrient levels","synonyms":[{"name":"down regulation of response to nutrient levels","type":"exact"},{"name":"down-regulation of response to nutrient levels","type":"exact"},{"name":"downregulation of response to nutrient levels","type":"exact"},{"name":"inhibition of response to nutrient levels","type":"narrow"}],"termid":"GO:0032108"}


id: MONDO:0017077
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spina bifida cystica","termid":"MONDO:0017069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"myelocystocele","secondary_identifiers":["UMLS:C4551677","SCTID:203994003","icd11.foundation:863949070","MEDGEN:1639659","Orphanet:268813","GARD:20966"],"termid":"MONDO:0017077","xrefs":{"Monarch":{"xref_id":"0017077"}}}


id: PR:Q9P3U9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ubiquitin-related modifier 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR14986:SF2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-related modifier 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC548.04","secondary_identifiers":["UniProtKB:Q9P3U9"],"synonyms":[{"name":"SPCC548.04","type":"related"},{"name":"Spom972h-URM1","type":"exact"}],"termid":"PR:Q9P3U9"}


id: GO:0072241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a metanephric distal convoluted tubule cell over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DCT cell development","termid":"GO:0072140"},{"relation_name":"part_of","term_name":"metanephric DCT cell differentiation","termid":"GO:0072240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric DCT cell development","synonyms":[{"name":"metanephric distal convoluted tubule cell development","type":"exact"}],"termid":"GO:0072241"}


id: PR:O74548
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- arg1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74548"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetylornithine aminotransferase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC777.09c","synonyms":[{"name":"ACOAT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-arg1","type":"exact"}],"termid":"PR:O74548"}


id: _global:involved_in_positive_regulation_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"c involved in regulation of p if c is involved in some p' and p' positively regulates some p","direct_ancestors":[{"relation_name":"is_a","term_name":"involved_in_regulation_of","termid":"_global:involved_in_regulation_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"involved_in_positive_regulation_of","secondary_identifiers":["RO:0002429"],"termid":"_global:involved_in_positive_regulation_of"}


id: GO:0075340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the increase in size or mass of an organism, or the progression of an organism from an initial condition to a later condition, occurring in, on or near the exterior of its host organism.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of growth or development of symbiont during interaction with host (obsolete GO:0075340)","synonyms":[{"name":"negative regulation of growth or development of symbiont during interaction with host","type":"exact"}],"termid":"GO:0075340"}


id: PBO:0030923
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_viability_in_stationary_phase","termid":"PBO:0030923"}


id: PBO:0073702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"src kinase associated phosphoprotein 2","termid":"PBO:0073702"}


id: GO:0010450
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The increase in size or mass of an inflorescence meristem, a population of undifferentiated cells in a plant shoot which produces small leaves and then floral meristems, which will give rise to flowers.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"meristem growth","termid":"GO:0035266"},{"relation_name":"part_of","term_name":"inflorescence development","termid":"GO:0010229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inflorescence meristem growth","termid":"GO:0010450"}


id: PBO:0081119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNFX1 antisense RNA 1","termid":"PBO:0081119"}


id: MONDO:0017253
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete anterior uveitis (obsolete MONDO:0017253)","termid":"MONDO:0017253","xrefs":{"Monarch":{"xref_id":"0017253"}}}


id: MONDO:0014617
data:
  {"annotated_genes":["SJAG_02180","SJAG_01851","SJAG_04157"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87079,87080,87081],"is_not":false,"summary":null,"term":"MONDO:0014617"}]},"cv_name":"mondo","definition":"Any autosomal dominant non-syndromic intellectual disability in which the cause of the disease is a mutation in the EEF1A2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intellectual disability, autosomal dominant","termid":"MONDO:0100172"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01851":null,"SJAG_02180":null,"SJAG_04157":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual disability, autosomal dominant 38","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0070068","GARD:16469","OMIM:616393","UMLS:C4225343","MEDGEN:895359"],"synonyms":[{"name":"EEF1A2 autosomal dominant non-syndromic intellectual disability","type":"exact"},{"name":"MRD38","type":"exact"},{"name":"PRELDS","type":"exact"},{"name":"autosomal dominant intellectual disability 38","type":"exact"},{"name":"autosomal dominant mental retardation 38","type":"exact"},{"name":"autosomal dominant non-syndromic intellectual disability 38","type":"related"},{"name":"autosomal dominant non-syndromic intellectual disability caused by mutation in EEF1A2","type":"exact"},{"name":"intellectual disability, autosomal dominant 38","type":"exact"},{"name":"intellectual disability, autosomal dominant type 38","type":"exact"},{"name":"mental retardation, autosomal dominant 38","type":"related"},{"name":"mental retardation, autosomal dominant type 38","type":"exact"},{"name":"psychomotor retardation, epilepsy, and language disability syndrome","type":"exact"}],"termid":"MONDO:0014617","terms_by_termid":{"MONDO:0014617":null},"xrefs":{"Monarch":{"xref_id":"0014617"}}}


id: GO:1990180
data:
  {"annotated_genes":["SJAG_02288","SJAG_01704","SJAG_04885","SJAG_00997"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71807,82146,89550,119787],"is_not":false,"summary":null,"term":"GO:1990180"}]},"cv_name":"biological_process","definition":"The process in which the 3' end of a pre-tRNA molecule is converted to that of a mature tRNA in the mitochondrion.","definition_xrefs":["PMID:23928301","GOC:TermGenie","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial RNA 3'-end processing","termid":"GO:0000965"},{"relation_name":"is_a","term_name":"tRNA 3'-end processing","termid":"GO:0042780"},{"relation_name":"is_a","term_name":"mitochondrial tRNA processing","termid":"GO:0090646"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00997":null,"SJAG_01704":null,"SJAG_02288":null,"SJAG_04885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140053"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0006399","GO:0140053","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"mitochondrial tRNA 3'-end processing","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"tRNA 3' processing in mitochondria","type":"exact"},{"name":"tRNA 3' processing in mitochondrion","type":"exact"},{"name":"tRNA 3'-end processing in mitochondria","type":"exact"}],"termid":"GO:1990180","terms_by_termid":{"GO:1990180":null}}


id: PBO:0018156
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nse5Ts Suppressor","termid":"PBO:0018156"}


id: PBO:0077600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMPRSS11B N-terminal like, pseudogene","termid":"PBO:0077600"}


id: PBO:0060938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFE2L1 divergent transcript","termid":"PBO:0060938"}


id: MONDO:0800299
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myopathy, congenital, with excess of muscle spindles","secondary_identifiers":["MEDGEN:369344","UMLS:C1968782"],"synonyms":[{"name":"CMEMS","type":"exact"}],"termid":"MONDO:0800299","xrefs":{"Monarch":{"xref_id":"0800299"}}}


id: MONDO:0030868
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 49","secondary_identifiers":["DOID:0112271","OMIM:619144","MEDGEN:1742668","UMLS:C5436887"],"synonyms":[{"name":"SPGF49","type":"exact"},{"name":"spermatogenic failure 49","type":"exact"}],"termid":"MONDO:0030868","xrefs":{"Monarch":{"xref_id":"0030868"}}}


id: FYPO:0005590
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of cardiolipin measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular phosphorus level","termid":"FYPO:0001543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal cellular cardiolipin level","synonyms":[{"name":"normal cellular cardiolipin accumulation","type":"related"},{"name":"normal cellular cardiolipin level during mitotic cell cycle","type":"related"},{"name":"normal cellular cardiolipin level during vegetative growth","type":"exact"}],"termid":"FYPO:0005590"}


id: PBO:0067577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 734, pseudogene","termid":"PBO:0067577"}


id: GO:1905446
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitochondrial ATP synthesis coupled electron transport.","definition_xrefs":["GOC:bc","PMID:23707074","GOC:PARL","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of generation of precursor metabolites and energy","termid":"GO:0043467"},{"relation_name":"regulates","term_name":"mitochondrial ATP synthesis coupled electron transport","termid":"GO:0042775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"regulation of mitochondrial ATP synthesis coupled electron transport","synonyms":[{"name":"regulation of mitochondrial electron transport","type":"broad"},{"name":"regulation of organelle ATP synthesis coupled electron transport","type":"broad"}],"termid":"GO:1905446"}


id: MOD:01452
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Covalent modification of a peptide or protein amino acid O-phosphopantetheine-L-serine with secondary neutral loss of pantetheine resulting in O-phospho-L-serine.","definition_xrefs":["PubMed:18688235","PubMed:17042494"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"O-phosphopantetheine-L-serine","termid":"MOD:00159"},{"relation_name":"is_a","term_name":"O-phospho-L-serine","termid":"MOD:00046"},{"relation_name":"is_a","term_name":"modified residue with a secondary neutral loss","termid":"MOD:00431"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00696"}],"interesting_parent_ids":["MOD:00696"],"is_obsolete":false,"name":"O-phosphopantetheine-L-serine with neutral loss of pantetheine","termid":"MOD:01452"}


id: MONDO:0100610
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The mildest form of autism spectrum disorder, characterized by difficulties with social communication and restricted, repetitive behaviors, requiring minimal support for daily functioning.","direct_ancestors":[{"relation_name":"is_a","term_name":"autism spectrum disorder","termid":"MONDO:0005258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"autism spectrum disorder 1","termid":"MONDO:0100610","xrefs":{"Monarch":{"xref_id":"0100610"}}}


id: PBO:0044651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynactin subunit 2","termid":"PBO:0044651"}


id: FYPO:0004465
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type) during a cellular response to camptothecin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal protein phosphorylation during cellular response to camptothecin","synonyms":[{"name":"normal protein phosphorylation during cellular response to CPT","type":"exact"},{"name":"normal protein phosphorylation during cellular response to camptothecin during mitotic cell cycle","type":"related"},{"name":"normal protein phosphorylation during cellular response to camptothecin during vegetative growth","type":"exact"}],"termid":"FYPO:0004465"}


id: PBO:0017510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEA complex subunit, ubiquitin-protein ligase E3, Sea4 (predicted)","termid":"PBO:0017510"}


id: GO:0032084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of a type I restriction endodeoxyribonuclease activity.","definition_xrefs":["GOC:dph","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of type I site-specific deoxyribonuclease activity (obsolete GO:0032084)","synonyms":[{"name":"regulation of type I restriction endodeoxyribonuclease activity","type":"exact"},{"name":"type I restriction endodeoxyribonuclease regulator","type":"related"},{"name":"type I restriction enzyme regulator","type":"related"}],"termid":"GO:0032084"}


id: PBO:0047269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 247 member A","termid":"PBO:0047269"}


id: PBO:0028559
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_microtubule_cytoskeleton_during_mitotic_interphase","termid":"PBO:0028559"}


id: GO:1902785
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an undecane stimulus.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators","GO_REF:0000071","PMID:23826995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to alkane","termid":"GO:1902779"},{"relation_name":"is_a","term_name":"response to undecane","termid":"GO:1902784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to undecane","termid":"GO:1902785"}


id: PBO:0032751
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"original gene was in a different frame","termid":"PBO:0032751"}


id: MONDO:0006784
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition characterized as a coagulation disturbance in newborns due to vitamin K deficiency resulting in impaired production of coagulation factors II, VII, IX, and X, and proteins C and S by the liver.","definition_xrefs":["NCIT:C111857"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood coagulation disease","termid":"MONDO:0001531"},{"relation_name":"is_a","term_name":"nutritional disorder","termid":"MONDO:0005137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"hemorrhagic disease of newborn","secondary_identifiers":["ICD10CM:P53","MEDGEN:42406","SCTID:12546009","MESH:D006475","UMLS:C0019088","ICD9:776.0","EFO:1000964","MedDRA:10019601"],"synonyms":[{"name":"hemorrhagic disease of newborn","type":"exact"},{"name":"vitamin K deficiency bleeding in newborn","type":"exact"}],"termid":"MONDO:0006784","xrefs":{"Monarch":{"xref_id":"0006784"}}}


id: PBO:0030470
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_iron-sulfur_cluster_transfer","termid":"PBO:0030470"}


id: PBO:0078153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 31 (pseudogene)","termid":"PBO:0078153"}


id: PBO:0055896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 17","termid":"PBO:0055896"}


id: PBO:0081070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger DHHC-type palmitoyltransferase 3","termid":"PBO:0081070"}


id: MONDO:1010222
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic myelomonocytic leukemia that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukemia, non-human animal","termid":"MONDO:0700100"},{"relation_name":"is_a","term_name":"immune system disorder, non-human animal","termid":"MONDO:0700106"},{"relation_name":"is_a","term_name":"connective tissue disorder, non-human animal","termid":"MONDO:1011309"},{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"},{"relation_name":"is_a","term_name":"cancer, non-human animal","termid":"MONDO:1011828"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic myelomonocytic leukemia, non-human animal","secondary_identifiers":["OMIA:002299"],"termid":"MONDO:1010222","xrefs":{"Monarch":{"xref_id":"1010222"}}}


id: GO:0140827
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to and delivering zinc ions to a target protein.","definition_xrefs":["PMID:35584675"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metallochaperone activity","termid":"GO:0016530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140104"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140104","GO:0003674"],"is_obsolete":false,"name":"zinc chaperone activity","synonyms":[{"name":"zinc carrier activity","type":"exact"}],"termid":"GO:0140827"}


id: PR:O43084
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hsp3103 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43084"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione-independent glyoxalase hsp3103 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC947.09","synonyms":[{"name":"Spom972h-hsp3103","type":"exact"},{"name":"glyoxalase 3 homolog 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"heat shock protein 31 homolog 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43084"}


id: PBO:0038430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,4-N-acetylglucosaminyltransferase","termid":"PBO:0038430"}


id: GO:0007303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of cytoplasmic constituents synthesized in the nurse cells to the oocyte.","definition_xrefs":["ISBN:0879694238"],"gene_count":0,"genotype_count":0,"name":"obsolete cytoplasmic transport, nurse cell to oocyte (obsolete GO:0007303)","termid":"GO:0007303"}


id: PBO:0013838
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PhosphoPantothenate-Cysteine","termid":"PBO:0013838"}


id: PR:Q09811
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rqh1 gene.","definition_xrefs":["UniProtKB:Q09811","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase hus2/rqh1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2G11.12","synonyms":[{"name":"Spom972h-rqh1","type":"exact"}],"termid":"PR:Q09811"}


id: GO:0070776
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A histone acetyltransferase complex that has histone H3 acetyltransferase and coactivator activities. Subunits of the human complex include MYST3/MOZ, MYST4/MORF, ING5, EAF6 and one of BRPF1, BRD1/BRPF2 and BRPF3.","definition_xrefs":["PMID:18794358"],"direct_ancestors":[{"relation_name":"is_a","term_name":"H3 histone acetyltransferase complex","termid":"GO:0070775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005694","GO:0032991"],"is_obsolete":false,"name":"MOZ/MORF histone acetyltransferase complex","termid":"GO:0070776"}


id: GO:1904194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cholangiocyte apoptotic process.","definition_xrefs":["PMID:24498161","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell apoptotic process","termid":"GO:1904037"},{"relation_name":"is_a","term_name":"regulation of cholangiocyte apoptotic process","termid":"GO:1904192"},{"relation_name":"positively_regulates","term_name":"cholangiocyte apoptotic process","termid":"GO:1902488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cholangiocyte apoptotic process","synonyms":[{"name":"activation of cholangiocyte apoptosis","type":"narrow"},{"name":"activation of cholangiocyte apoptotic process","type":"narrow"},{"name":"activation of epithelial cell of bile duct apoptosis","type":"narrow"},{"name":"activation of epithelial cell of bile duct apoptotic process","type":"narrow"},{"name":"positive regulation of cholangiocyte apoptosis","type":"narrow"},{"name":"positive regulation of epithelial cell of bile duct apoptosis","type":"narrow"},{"name":"positive regulation of epithelial cell of bile duct apoptotic process","type":"exact"},{"name":"up regulation of cholangiocyte apoptosis","type":"narrow"},{"name":"up regulation of cholangiocyte apoptotic process","type":"exact"},{"name":"up regulation of epithelial cell of bile duct apoptosis","type":"narrow"},{"name":"up regulation of epithelial cell of bile duct apoptotic process","type":"exact"},{"name":"up-regulation of cholangiocyte apoptosis","type":"narrow"},{"name":"up-regulation of cholangiocyte apoptotic process","type":"exact"},{"name":"up-regulation of epithelial cell of bile duct apoptosis","type":"narrow"},{"name":"up-regulation of epithelial cell of bile duct apoptotic process","type":"exact"},{"name":"upregulation of cholangiocyte apoptosis","type":"narrow"},{"name":"upregulation of cholangiocyte apoptotic process","type":"exact"},{"name":"upregulation of epithelial cell of bile duct apoptosis","type":"narrow"},{"name":"upregulation of epithelial cell of bile duct apoptotic process","type":"exact"}],"termid":"GO:1904194"}


id: PBO:0025539
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid metabolism disorder","termid":"PBO:0025539"}


id: GO:0035884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of arabinan, a polysaccharide composed of arabinose residues.","definition_xrefs":["ISBN:0198506732","GOC:rs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide biosynthetic process","termid":"GO:0000271"},{"relation_name":"is_a","term_name":"arabinan metabolic process","termid":"GO:0031221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"arabinan biosynthetic process","termid":"GO:0035884"}


id: MOD:00213
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-serine residue to the polymer chondroitin sulfate by a D-glucuronosyl-D-galactosyl-D-galactosyl-D-xylosyl tetrasaccharide.","definition_xrefs":["PubMed:1794445","PubMed:1898736","PubMed:3472204","RESID:AA0208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-glycosyl-L-serine","termid":"MOD:00002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"chondroitin sulfate D-glucuronosyl-D-galactosyl-D-galactosyl-D-xylosyl-L-serine","synonyms":[{"name":"chondroitin 4-sulfate (chondroitin sulfate A)","type":"exact"},{"name":"chondroitin 6-sulfate (chondroitin sulfate C)","type":"exact"},{"name":"chondroitin sulfate D-glucuronosyl-D-galactosyl-D-galactosyl-D-xylosyl-L-serine","type":"exact"},{"name":"poly[beta-1,4-D-glucopyranuronosyl-beta-1,3-(2-acetamido-2-deoxy-4-sulfate-D-galactosyl)]-beta-1,4-D-glucopyranuronosyl-beta-1,3-D-galactosyl-beta-1,3-D-galactosyl-beta-1,4-D-xylosyl-beta-1,3-L-serine; poly[beta-1,4-D-glucopyranuronosyl-beta-1,3-(2-acetamido-2-deoxy-6-sulfate D-galactosyl)]-beta-1,4-D-glucopyranuronosyl-beta-1,3-D-galactosyl-beta-1,3-D-galactosyl-beta-1,4-D-xylosyl-beta-1,3-L-serine","type":"exact"}],"termid":"MOD:00213"}


id: PBO:0088773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk8","termid":"PBO:0088773"}


id: PBO:0051745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrator complex subunit 11","termid":"PBO:0051745"}


id: GO:0034153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of toll-like receptor 6 signaling pathway.","definition_xrefs":["GOC:add","PMID:16551253","PMID:17328678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of toll-like receptor 6 signaling pathway","termid":"GO:0034151"},{"relation_name":"is_a","term_name":"positive regulation of pattern recognition receptor signaling pathway","termid":"GO:0062208"},{"relation_name":"positively_regulates","term_name":"toll-like receptor 6 signaling pathway","termid":"GO:0034150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of toll-like receptor 6 signaling pathway","synonyms":[{"name":"positive regulation of TLR6 signaling pathway","type":"exact"},{"name":"positive regulation of toll-like receptor 6 signalling pathway","type":"exact"}],"termid":"GO:0034153"}


id: PBO:0058007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3934","termid":"PBO:0058007"}


id: PBO:0086684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by homology to uncharacterized proteins in other fungi","termid":"PBO:0086684"}


id: PBO:0085340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphoinositide binding protein; required for vesicle formation in the cytoplasm-to-vacuole targeting (CVT) pathway, autophagy, micronucleophagy and mitophagy; binds to several phosphoinositides including: PtdIns(3,5)P2, PI3P and PI4P; involved in PI3P-dependent recruitment and organization of both the Atg12-Atg5-Atg16 complex and Atg8p at the pre-autophagosomal structure; necessary for oxidant-induced cell death; WD-40 repeat containing PROPPIN family member","termid":"PBO:0085340"}


id: MONDO:0000098
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete thyrotoxic periodic paralysis (obsolete MONDO:0000098)","termid":"MONDO:0000098","xrefs":{"Monarch":{"xref_id":"0000098"}}}


id: PBO:0027319
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitochondrial_electron_transport,_succinate_to_ubiquinone","termid":"PBO:0027319"}


id: PBO:0027854
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_vacuolar_membrane","termid":"PBO:0027854"}


id: GO:0099620
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-4-amino-4-deoxy-beta-L-arabinopyranose + 2-oxoglutarate = UDP-beta-L-threo-pentapyranos-4-ulose + L-glutamate.","definition_xrefs":["GOC:dos","GOC:al","PMID:12704196","PMID:12429098"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016769"],"is_obsolete":false,"name":"UDP-4-amino-4-deoxy-L-arabinose aminotransferase","secondary_identifiers":["RHEA:24710","EC:2.6.1.87"],"synonyms":[{"name":"UDP-(beta-L-threo-pentapyranosyl-4''-ulose diphosphate) aminotransferase","type":"exact"},{"name":"UDP-4-amino-4-deoxy-L-arabinose---oxoglutarate aminotransferase","type":"exact"},{"name":"UDP-4-amino-4-deoxy-beta-L-arabinose:2-oxoglutarate aminotransferase","type":"exact"},{"name":"UDP-Ara4O aminotransferase","type":"exact"},{"name":"UDP-L-Ara4N transaminase","type":"exact"}],"termid":"GO:0099620"}


id: GO:0030399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled breakdown of the membranes of autophagosomes.","definition_xrefs":["GOC:autophagy","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane disassembly","termid":"GO:0030397"},{"relation_name":"is_a","term_name":"autophagosome organization","termid":"GO:1905037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006914","GO:0008150","GO:0061024"],"is_obsolete":false,"name":"autophagosome membrane disassembly","synonyms":[{"name":"autophagic membrane breakdown","type":"exact"},{"name":"autophagic membrane catabolism","type":"narrow"},{"name":"autophagic membrane degradation","type":"narrow"},{"name":"autophagic vacuole membrane disassembly","type":"exact"}],"termid":"GO:0030399"}


id: GO:0031234
data:
  {"annotated_genes":["SJAG_04026","SJAG_03081","SJAG_02444","SJAG_02605","SJAG_02233"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[112389],"is_not":false,"summary":null,"term":"GO:0031234"},{"annotations":[82141,75949,77039,108329],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005834"}]},"cv_name":"cellular_component","definition":"The component of a plasma membrane consisting of gene products and protein complexes that are loosely bound to its cytoplasmic surface, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of plasma membrane","termid":"GO:0019897"},{"relation_name":"part_of","term_name":"cytoplasmic side of plasma membrane","termid":"GO:0009898"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02233":null,"SJAG_02444":null,"SJAG_02605":null,"SJAG_03081":null,"SJAG_04026":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"extrinsic component of cytoplasmic side of plasma membrane","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"extrinsic to cytoplasmic side of plasma membrane","type":"narrow"},{"name":"extrinsic to internal leaflet of plasma membrane","type":"exact"},{"name":"extrinsic to internal side of plasma membrane","type":"exact"}],"termid":"GO:0031234","terms_by_termid":{"GO:0005834":null,"GO:0031234":null}}


id: MONDO:0010611
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of L1 syndrome caused by changes in the L1CAM gene characterized by severe hydrocephalus mostly with prenatal onset, signs of intracranial hypertension, adducted thumbs, spasticity, and severe intellectual deficit. HSAS represents the severe end of the spectrum and is associated with poor prognosis.","definition_xrefs":["Orphanet:2182"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked disease","termid":"MONDO:0000425"},{"relation_name":"is_a","term_name":"congenital hydrocephalus","termid":"MONDO:0016349"},{"relation_name":"is_a","term_name":"L1 syndrome","termid":"MONDO:0017140"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"X-linked hydrocephalus with stenosis of the aqueduct of Sylvius","secondary_identifiers":["SCTID:71779008","GARD:434","MEDGEN:75552","MESH:C536078","UMLS:C0265216","OMIM:307000","icd11.foundation:1284135636"],"synonyms":[{"name":"Bickers-Adams syndrome","type":"exact"},{"name":"HSAS","type":"exact"},{"name":"HSAS1","type":"related"},{"name":"HYCX","type":"related"},{"name":"X-linked HSAS","type":"exact"},{"name":"X-linked acqueductal stenosis","type":"exact"},{"name":"X-linked hydrocephalus","type":"exact"},{"name":"X-linked hydrocephalus with stenosis of aqueduct of Sylvius","type":"exact"},{"name":"X-linked hydrocephalus with stenosis of the aqueduct of Sylvius","type":"exact"},{"name":"XLAS","type":"related"},{"name":"aqueductal stenosis, X-linked","type":"related"},{"name":"hydrocephalus due to aqueductal stenosis, X-linked recessive","type":"exact"},{"name":"hydrocephalus due to congenital stenosis of aqueduct of Sylvius","type":"related"},{"name":"hydrocephalus with congenital idiopathic intestinal pseudoobstruction, X-linked recessive","type":"exact"},{"name":"hydrocephalus with hirschsprung disease, X-linked recessive","type":"exact"},{"name":"hydrocephalus with stenosis of the aqueduct of Sylvius","type":"exact"},{"name":"hydrocephalus, X-linked","type":"related"},{"name":"hydrocephalus, X-linked, with congenital idiopathic intestinal pseudoobstruction","type":"related"}],"termid":"MONDO:0010611","xrefs":{"Monarch":{"xref_id":"0010611"}}}


id: FYPO:0001392
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype in which regulation of vegetative cell growth is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype during vegetative growth","termid":"FYPO:0001334"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal regulation of cell growth","synonyms":[{"name":"abnormal regulation of vegetative cell growth","type":"exact"}],"termid":"FYPO:0001392"}


id: GO:0005155
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["GOC:tb","GOC:mah","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete epidermal growth factor receptor activating ligand activity (obsolete GO:0005155)","synonyms":[{"name":"EGF receptor activating ligand activity","type":"exact"},{"name":"EGFR activating ligand activity","type":"exact"},{"name":"epidermal growth factor receptor activating ligand activity","type":"exact"}],"termid":"GO:0005155"}


id: MONDO:0045056
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An atypical meningioma which may recur in approximately 29-40% of the cases. This category includes the atypical meningioma, chordoid meningioma, and clear cell meningioma.","definition_xrefs":["NCIT:C38937"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meningioma","termid":"MONDO:0016642"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grade II meningioma","secondary_identifiers":["MEDGEN:307517","UMLS:C1512259"],"synonyms":[{"name":"WHO grade II meningioma","type":"exact"},{"name":"grade 2 meningioma","type":"exact"},{"name":"grade II meningioma","type":"exact"}],"termid":"MONDO:0045056","xrefs":{"Monarch":{"xref_id":"0045056"}}}


id: GO:0007427
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of epithelial cells during development of an open tracheal system. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:bf","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell migration","termid":"GO:0010631"},{"relation_name":"part_of","term_name":"open tracheal system development","termid":"GO:0007424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell migration, open tracheal system","synonyms":[{"name":"tracheal cell migration","type":"broad"},{"name":"tracheal epithelial cell migration","type":"related"}],"termid":"GO:0007427"}


id: MONDO:0014100
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any dilated cardiomyopathy in which the cause of the disease is a mutation in the MYPN gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial restrictive cardiomyopathy","termid":"MONDO:0016340"},{"relation_name":"is_a","term_name":"familial hypertrophic cardiomyopathy","termid":"MONDO:0024573"},{"relation_name":"is_a","term_name":"familial isolated dilated cardiomyopathy","termid":"MONDO:0700335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dilated cardiomyopathy 1KK","secondary_identifiers":["GARD:15926","MEDGEN:811544","DOID:0110445","UMLS:C3714995","OMIM:615248"],"synonyms":[{"name":"CMD1KK","type":"exact"},{"name":"MYPN dilated cardiomyopathy","type":"exact"},{"name":"cardiomyopathy, dilated, 1KK","type":"related"},{"name":"cardiomyopathy, dilated, type 1Kk","type":"exact"},{"name":"cardiomyopathy, familial hypertrophic, 22","type":"related"},{"name":"cardiomyopathy, familial restrictive, 4","type":"related"},{"name":"cardiomyopathy, hypertrophic, 22","type":"exact"},{"name":"dilated cardiomyopathy caused by mutation in MYPN","type":"exact"},{"name":"dilated cardiomyopathy type 1KK","type":"exact"}],"termid":"MONDO:0014100","xrefs":{"Monarch":{"xref_id":"0014100"}}}


id: GO:0009519
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Layer of intercellular material, chiefly pectic substances, cementing together the primary walls of contiguous cells.","definition_xrefs":["ISBN:0471245208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specialized extracellular matrix","termid":"GO:0140047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"middle lamella","secondary_identifiers":["Wikipedia:Middle_lamella"],"termid":"GO:0009519"}


id: PBO:0043565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type VI alpha 3 chain","termid":"PBO:0043565"}


id: MONDO:0004166
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fallopian tube carcinoma that has developed in relatives of patients that have a history of fallopian tube carcinoma.","definition_xrefs":["NCIT:C40455"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"fallopian tube carcinoma","termid":"MONDO:0006206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"hereditary fallopian tube carcinoma","secondary_identifiers":["UMLS:C1512418","MEDGEN:307556","DOID:7266"],"synonyms":[{"name":"familial fallopian tube carcinoma","type":"exact"},{"name":"familiar fallopian tube carcinoma","type":"related"},{"name":"hereditary fallopian tube cancer","type":"exact"},{"name":"hereditary fallopian tube carcinoma","type":"exact"}],"termid":"MONDO:0004166","xrefs":{"Monarch":{"xref_id":"0004166"}}}


id: GO:1903871
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a DNA recombinase mediator complex.","definition_xrefs":["GO_REF:0000079","GOC:TermGenie","GOC:rb","PMID:18347097"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA repair complex assembly","termid":"GO:0090735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"DNA recombinase mediator complex assembly","synonyms":[{"name":"DNA recombinase mediator complex formation","type":"exact"}],"termid":"GO:1903871"}


id: PBO:0042964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 2","termid":"PBO:0042964"}


id: FYPO:0001609
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-ornithine measured in the vacuole is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular ornithine level","termid":"FYPO:0001564"},{"relation_name":"is_a","term_name":"decreased level of substance in vacuole","termid":"FYPO:0001602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased vacuolar ornithine level","synonyms":[{"name":"decreased vacuolar ornithine level during vegetative growth","type":"exact"},{"name":"reduced level of ornithine in vacuole","type":"exact"},{"name":"reduced vacuolar ornithine level","type":"exact"},{"name":"decreased level of ornithine in vacuole","type":"exact"},{"name":"decreased vacuolar L-ornithine level","type":"exact"},{"name":"decreased vacuolar ornithine level during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001609"}


id: MONDO:0022025
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"demyelinating disease","termid":"MONDO:0002562"},{"relation_name":"is_a","term_name":"arthrogryposis","termid":"MONDO:0008779"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"boylan dew greco syndrome","secondary_identifiers":["UMLS:C2931419","MEDGEN:419407","MESH:C537083","GARD:954"],"synonyms":[{"name":"congenital hypomyelination neuropathy with arthrogryposis multiplex congenita","type":"related"}],"termid":"MONDO:0022025","xrefs":{"Monarch":{"xref_id":"0022025"}}}


id: PBO:0067152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 202, pseudogene","termid":"PBO:0067152"}


id: PBO:0074767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 3A","termid":"PBO:0074767"}


id: PBO:0085153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleosome assembly factor; involved in chromatin assembly, disassembly; required for recovery after DSB repair; role in H3K56 acetylation required for expression homeostasis, buffering mRNA synthesis rate against gene dosage changes in S phase; anti-silencing protein, derepresses silent loci when overexpressed; role in regulating Ty1 transposition; relocalizes to cytosol under hypoxia; growth defect of asf1 null is functionally complemented by either human ASF1A or ASF1B","termid":"PBO:0085153"}


id: PBO:0091790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-coding RNA, probable 5' UTR of SPBC365.16","termid":"PBO:0091790"}


id: GO:0071290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a platinum stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to platinum ion","termid":"GO:0070541"},{"relation_name":"is_a","term_name":"cellular response to metal ion","termid":"GO:0071248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to platinum ion","synonyms":[{"name":"cellular response to platinum","type":"exact"}],"termid":"GO:0071290"}


id: PBO:0056301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated protein 1 light chain 3 pseudogene","termid":"PBO:0056301"}


id: PBO:0089358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pheromone p-factor receptor Mam2","termid":"PBO:0089358"}


id: GO:0042735
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded plant organelle found in the developing endosperm, contains storage proteins.","definition_xrefs":["PMID:7704047","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"endosperm protein body","termid":"GO:0042735"}


id: PBO:0078840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Pro (anticodon TGG) 3-4","termid":"PBO:0078840"}


id: GO:0009175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pyrimidine ribonucleoside monophosphate, a compound consisting of a pyrimidine base linked to a ribose sugar esterified with phosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside monophosphate catabolic process","termid":"GO:0009131"},{"relation_name":"is_a","term_name":"ribonucleoside monophosphate catabolic process","termid":"GO:0009158"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside monophosphate metabolic process","termid":"GO:0009173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"pyrimidine ribonucleoside monophosphate catabolic process","synonyms":[{"name":"pyrimidine ribonucleoside monophosphate breakdown","type":"exact"},{"name":"pyrimidine ribonucleoside monophosphate catabolism","type":"exact"},{"name":"pyrimidine ribonucleoside monophosphate degradation","type":"exact"}],"termid":"GO:0009175"}


id: PBO:0052865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 5-8","termid":"PBO:0052865"}


id: FYPO:0009025
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which cell growth is increased relative to normal in a medium containing isoleucine as the nitrogen source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0001985","FYPO:0002058","FYPO:0000139","FYPO:0002057"],"is_obsolete":false,"name":"increased cell population growth on isoleucine nitrogen source","synonyms":[{"name":"increased growth on isoleucine nitrogen source","type":"broad"},{"name":"increased vegetative cell growth on isoleucine nitrogen source","type":"exact"}],"termid":"FYPO:0009025"}


id: PBO:0002245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase Fmp31 (predicted)","termid":"PBO:0002245"}


id: GO:0015716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of phosphonates into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. A phosphonate is any salt, anion, or ester of phosphonic acid (HPO(OH)2).","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transport","termid":"GO:0015698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"organic phosphonate transport","secondary_identifiers":["GO:0042916"],"synonyms":[{"name":"alkylphosphonate transport","type":"narrow"}],"termid":"GO:0015716"}


id: PBO:0080222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VIPR1 antisense RNA 1","termid":"PBO:0080222"}


id: PBO:0050440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein M pseudogene 1","termid":"PBO:0050440"}


id: PBO:0027047
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_duration_of_mitotic_G2_DNA_damage_checkpoint","termid":"PBO:0027047"}


id: PR:Q9UUB0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrps17 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUB0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"37S ribosomal protein S17, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC409.14c","synonyms":[{"name":"Spom972h-mrps17","type":"exact"}],"termid":"PR:Q9UUB0"}


id: GO:0002102
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An actin-rich adhesion structure characterized by formation upon cell substrate contact and localization at the substrate-attached part of the cell, contain an F-actin-rich core surrounded by a ring structure containing proteins such as vinculin and talin, and have a diameter of 0.5 mm.","definition_xrefs":["PMID:15890982","PMID:12837608"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membraneless organelle","termid":"GO:0043232"},{"relation_name":"part_of","term_name":"actin cytoskeleton","termid":"GO:0015629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015629"}],"interesting_parent_ids":["GO:0005575","GO:0015629"],"is_obsolete":false,"name":"podosome","secondary_identifiers":["Wikipedia:Podosome"],"termid":"GO:0002102"}


id: GO:0019398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of gallate, the anion of gallic acid, where the first step is the conversion of gallate to (1E)-4-oxobut-1-ene-1,2,4-tricarboxylate catalyzed by gallate dioxygenase.","definition_xrefs":["GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aerobic gallate catabolic process","termid":"GO:0042195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"gallate catabolic process via gallate dioxygenase activity","secondary_identifiers":["MetaCyc:GALLATE-DEGRADATION-II-PWY"],"synonyms":[{"name":"gallate breakdown via 4-carboxy-2-hydroxhexa-2,3-dienedioate","type":"exact"},{"name":"gallate catabolic process via 4-carboxy-2-hydroxhexa-2,3-dienedioate","type":"broad"},{"name":"gallate degradation via 4-carboxy-2-hydroxhexa-2,3-dienedioate","type":"exact"},{"name":"gallic acid catabolic process via 4-carboxy-2-hydroxhexa-2,3-dienedioate","type":"exact"},{"name":"gallic acid catabolism via 4-carboxy-2-hydroxhexa-2,3-dienedioate","type":"exact"}],"termid":"GO:0019398"}


id: MONDO:0030029
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"skeletal dysplasia, mild, with joint laxity and advanced bone age","secondary_identifiers":["MEDGEN:1711043","OMIM:618870","UMLS:C5394341"],"synonyms":[{"name":"SDJLABA","type":"exact"},{"name":"SKELETAL DYSPLASIA, MILD, WITH JOINT LAXITY AND ADVANCED BONE AGE","type":"exact"},{"name":"skeletal dysplasia, mild, with joint laxity and advanced bone age","type":"exact"}],"termid":"MONDO:0030029","xrefs":{"Monarch":{"xref_id":"0030029"}}}


id: MONDO:0030314
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"inflammatory bowel disease (infantile ulcerative colitis) 31, autosomal recessive","secondary_identifiers":["MEDGEN:1783277","OMIM:619398","UMLS:C5444224"],"synonyms":[{"name":"IBD31","type":"exact"},{"name":"inflammatory bowel disease (infantile ulcerative colitis) 31","type":"exact"},{"name":"inflammatory bowel disease (infantile ulcerative colitis) 31, autosomal recessive","type":"exact"},{"name":"inflammatory bowel disease, early-onset, autosomal recessive","type":"related"}],"termid":"MONDO:0030314","xrefs":{"Monarch":{"xref_id":"0030314"}}}


id: PBO:0047401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 39","termid":"PBO:0047401"}


id: MONDO:0008789
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"anemia, nonspherocytic hemolytic","termid":"MONDO:0000105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"anemia, nonspherocytic hemolytic, associated with abnormality of red cell membrane","secondary_identifiers":["UMLS:C1859786","MEDGEN:349245","MESH:C565953","OMIM:206300"],"synonyms":[{"name":"anemia, nonspherocytic hemolytic, associated with abnormality of red cell membrane","type":"exact"}],"termid":"MONDO:0008789","xrefs":{"Monarch":{"xref_id":"0008789"}}}


id: PBO:0050331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 33","termid":"PBO:0050331"}


id: PBO:0034446
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_okadaic_acid","termid":"PBO:0034446"}


id: MONDO:0005050
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An invasive ductal breast carcinoma associated with a lobular carcinomatous component. The lobular carcinomatous component may be in situ or invasive.","definition_xrefs":["NCIT:C7688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"invasive ductal breast carcinoma","termid":"MONDO:0004953"},{"relation_name":"is_a","term_name":"mixed lobular and ductal breast carcinoma","termid":"MONDO:0006306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"invasive ductal and lobular carcinoma","secondary_identifiers":["ICDO:8522/3","UMLS:C1334277","MEDGEN:235231","EFO:0000552"],"synonyms":[{"name":"infiltrating ductal and lobular carcinoma","type":"exact"},{"name":"invasive duct and lobular carcinoma","type":"exact"},{"name":"invasive ductal and lobular carcinoma","type":"exact"}],"termid":"MONDO:0005050","xrefs":{"Monarch":{"xref_id":"0005050"}}}


id: GO:0031045
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Electron-dense organelle with a granular internal matrix; contains proteins destined to be secreted.","definition_xrefs":["NIF_Subcellular:sao772007592","PMID:14690495"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule","termid":"GO:0030141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"dense core granule","synonyms":[{"name":"dense core vesicle","type":"exact"}],"termid":"GO:0031045"}


id: PBO:0060504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleosome assembly protein 1 like 4 pseudogene 3","termid":"PBO:0060504"}


id: GO:2000144
data:
  {"annotated_genes":["SJAG_01403","SJAG_04705","SJAG_00909","SJAG_02494","SJAG_02391","SJAG_00904","SJAG_04647","SJAG_01952","SJAG_01771","SJAG_04820","SJAG_05341","SJAG_03590","SJAG_00150","SJAG_00342","SJAG_03573","SJAG_00766","SJAG_02551","SJAG_04099","SJAG_03622","SJAG_00297","SJAG_02849","SJAG_03421","SJAG_05203"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[81314,91526],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045899"},{"annotations":[110592,100489,97680,97198,107878,108067,100840,96149,105494,96264,116592,110565,103776,120814,105235,92181,107523,65407,108204,89261,92492],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060261"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of DNA-templated transcription initiation.","definition_xrefs":["GOC:txnOH","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA-templated transcription","termid":"GO:0045893"},{"relation_name":"is_a","term_name":"regulation of DNA-templated transcription initiation","termid":"GO:2000142"},{"relation_name":"positively_regulates","term_name":"DNA-templated transcription initiation","termid":"GO:0006352"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00150":null,"SJAG_00297":null,"SJAG_00342":null,"SJAG_00766":null,"SJAG_00904":null,"SJAG_00909":null,"SJAG_01403":null,"SJAG_01771":null,"SJAG_01952":null,"SJAG_02391":null,"SJAG_02494":null,"SJAG_02551":null,"SJAG_02849":null,"SJAG_03421":null,"SJAG_03573":null,"SJAG_03590":null,"SJAG_03622":null,"SJAG_04099":null,"SJAG_04647":null,"SJAG_04705":null,"SJAG_04820":null,"SJAG_05203":null,"SJAG_05341":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006355","GO:0006351"],"is_obsolete":false,"name":"positive regulation of DNA-templated transcription initiation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"positive regulation of DNA-dependent transcription, initiation","type":"exact"},{"name":"positive regulation of DNA-templated transcription, initiation","type":"exact"},{"name":"positive regulation of initiation of DNA-dependent transcription","type":"exact"},{"name":"positive regulation of transcription initiation, DNA-dependent","type":"exact"},{"name":"transactivation","type":"related"},{"name":"transcriptional transactivation","type":"related"}],"termid":"GO:2000144","terms_by_termid":{"GO:0045899":null,"GO:0060261":null}}


id: GO:0070744
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is composed of an interleukin-27p28 subunit (product of the IL27 gene) and an EBI3 subunit and is secreted into the extracellular space.","definition_xrefs":["GOC:add","PMID:19161428","PMID:15999093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"extracellular space","termid":"GO:0005615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005576"],"is_obsolete":false,"name":"interleukin-27 complex","synonyms":[{"name":"EBI3","type":"narrow"},{"name":"IL-27 complex","type":"exact"},{"name":"IL27","type":"narrow"},{"name":"p28","type":"narrow"}],"termid":"GO:0070744"}


id: MONDO:1012384
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"forelimb-girdle muscular anomaly, non-human animal","termid":"MONDO:1011798"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forelimb-girdle muscular anomaly, cattle","secondary_identifiers":["OMIA:001442-9913"],"termid":"MONDO:1012384","xrefs":{"Monarch":{"xref_id":"1012384"}}}


id: MONDO:0956976
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic asthma that is characterized by the pathophysiology phenotype combination (endotype) of non-atopic, smoking, obesity related, and elderly and that is characterized by neutrophilic (sputum neutrophils > 40–60%) or paucigranulocytic (i.e., normal sputum levels of both eosinophils and neutrophils) inflammation and a lack of response to corticosteroid therapy.","definition_xrefs":["DOID:0080818"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic asthma","termid":"MONDO:0850282"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T2-low asthma","termid":"MONDO:0956976","xrefs":{"Monarch":{"xref_id":"0956976"}}}


id: PBO:0083739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential component of the conserved oligomeric Golgi complex; a cytosolic tethering complex (Cog1p through Cog8p) that functions in protein trafficking to mediate fusion of transport vesicles to Golgi compartments","termid":"PBO:0083739"}


id: FYPO:0000177
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which assembly of the mitotic spindle is abnormal. Spindle assembly is the aggregation, arrangement and bonding together of a set of components to form the spindle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"abnormal mitotic spindle","termid":"FYPO:0000338"},{"relation_name":"is_a","term_name":"abnormal spindle assembly","termid":"FYPO:0000119"},{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid segregation","termid":"FYPO:0000141"},{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0001350"},{"relation_name":"is_a","term_name":"abnormal cellular component assembly during vegetative growth","termid":"FYPO:0001354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0000337","FYPO:0000641","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal mitotic spindle assembly","secondary_identifiers":["FYPO:0001349"],"synonyms":[{"name":"abnormal bipolar spindle formation","type":"exact"},{"name":"abnormal mitotic spindle assembly during vegetative growth","type":"exact"},{"name":"abnormal spindle assembly during mitotic cell cycle","type":"related"},{"name":"abnormal spindle assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0000177"}


id: PBO:0079919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome c reductase hinge protein pseudogene 4","termid":"PBO:0079919"}


id: PBO:0000850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase, RIO family (predicted)","termid":"PBO:0000850"}


id: MONDO:0100462
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic skeletal disorder characterized clinically by abnormal chondro-skeletal development, disproportionate short stature and skeletal deformation mainly affecting the knees, hips, ankles and elbows with onset generally in late childhood or adolescence.","definition_xrefs":["Orphanet:251262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteonecrosis of genetic origin","termid":"MONDO:0018383"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short stature and advanced bone age, with or without early-onset osteoarthritis and/or osteochondritis dissecans","secondary_identifiers":["UMLS:C3665488","OMIM:165800","MEDGEN:777109","GARD:4133"],"synonyms":[{"name":"OD","type":"exact"},{"name":"SSOAOD","type":"exact"},{"name":"osteochondritis dissecans and short stature","type":"exact"},{"name":"osteochondritis dissecans, short stature, and early-onset osteoarthritis","type":"exact"}],"termid":"MONDO:0100462","xrefs":{"Monarch":{"xref_id":"0100462"}}}


id: GO:1990157
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-DNA complex consisting of the helicase loading complex DnaB-DnaC bound to the DNA-bound DNA replication initiation protein DnaA. Essential for DNA replication initiation.","definition_xrefs":["GOC:bhm","PMID:20129058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pre-primosome complex","termid":"GO:1990099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005694"],"is_obsolete":false,"name":"DnaA-DnaB-DnaC complex","termid":"GO:1990157"}


id: GO:0002071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process, independent of morphogenetic (shape) change, that is required for a glandular epithelial cell to attain its fully functional state. A glandular epithelial cell is a columnar/cuboidal epithelial cell is a cell found in a two dimensional sheet with a free surface exposed to the lumen of a gland.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"columnar/cuboidal epithelial cell maturation","termid":"GO:0002069"},{"relation_name":"part_of","term_name":"glandular epithelial cell development","termid":"GO:0002068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glandular epithelial cell maturation","termid":"GO:0002071"}


id: PBO:0038541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase domain containing 14B","termid":"PBO:0038541"}


id: MONDO:0700215
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neoplasm associated with the expression of a Neurotrophic Tyrosine Receptor Kinase (NTRK) Fusion. NTRK fusion-positive tumors have been identified in a broad range of solid tumor types, including breast, cholangiocarcinoma, colorectal, gynecological, neuroendocrine, non-small cell lung, salivary gland, pancreatic, sarcoma and thyroid cancers.","definition_xrefs":["PMID:30333516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NTRK fusion positive cancer","synonyms":[{"name":"NTRK fusion positive neoplasm","type":"exact"},{"name":"NTRK fusion positive solid tumor","type":"exact"},{"name":"NTRK fusion positive solid tumour","type":"exact"},{"name":"neurotrophic tyrosine receptor kinase fusion positive cancer","type":"exact"},{"name":"neurotrophic tyrosine receptor kinase fusion positive neoplasm","type":"exact"},{"name":"neurotrophic tyrosine receptor kinase fusion positive solid tumor","type":"exact"},{"name":"neurotrophic tyrosine receptor kinase fusion positive solid tumour","type":"exact"}],"termid":"MONDO:0700215","xrefs":{"Monarch":{"xref_id":"0700215"}}}


id: PBO:0042823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxylesterase 2","termid":"PBO:0042823"}


id: PBO:0029709
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_low_pH","termid":"PBO:0029709"}


id: PBO:0058086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4303","termid":"PBO:0058086"}


id: SO:0001656
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding site that, in the molecule, interacts selectively and non-covalently with metal ions.","definition_xrefs":["SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding_site","termid":"SO:0000409"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metal_binding_site","synonyms":[{"name":"metal binding site","type":"related"}],"termid":"SO:0001656"}


id: MONDO:0005994
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection by roundworms of the superfamily trichostrongyloidea, including the genera trichostrongylus; ostertagia; Cooperia, haemonchus; Nematodirus, Hyostrongylus, and dictyocaulus.","definition_xrefs":["MESH:D014252"],"direct_ancestors":[{"relation_name":"is_a","term_name":"helminthiasis","termid":"MONDO:0004664"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trichostrongyloidiasis","secondary_identifiers":["DOID:1255","MEDGEN:11907","UMLS:C0040947"],"synonyms":[{"name":"Trichostrongyloidea caused disease or disorder","type":"exact"},{"name":"Trichostrongyloidea disease or disorder","type":"exact"},{"name":"Trichostrongyloidea infectious disease","type":"exact"}],"termid":"MONDO:0005994","xrefs":{"Monarch":{"xref_id":"0005994"}}}


id: PBO:0060882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neudesin neurotrophic factor pseudogene 3","termid":"PBO:0060882"}


id: PBO:0078520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 10","termid":"PBO:0078520"}


id: MONDO:0012755
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Episodic ataxia type 7 (EA7) is an exceedingly rare form of Hereditary episodic ataxia characterized by ataxia with weakness, vertigo, and dysarthria without interictal findings.","definition_xrefs":["Orphanet:209970"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary episodic ataxia","termid":"MONDO:0016227"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"episodic ataxia type 7","secondary_identifiers":["MEDGEN:383209","DOID:0050995","OMIM:611907","UMLS:C2677843","SCTID:718752007","MESH:C567459","GARD:17108","icd11.foundation:1855038011"],"synonyms":[{"name":"EA7","type":"related"},{"name":"episodic ataxia, type 7","type":"related"}],"termid":"MONDO:0012755","xrefs":{"Monarch":{"xref_id":"0012755"}}}


id: MONDO:0016822
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare systemic disease characterized by severe myalgia and peripheral eosinophilia associated with tryptophan dietary supplementation. The symptoms do not subside after tryptophan discontinuation. Clinical presentation includes muscle tenderness and cramps, fatigue, weakness, paresthesia, peripheral edema, arthralgia, dyspnea, skin rash, dry mouth, and development of scleroderma-like skin abnormalities.","definition_xrefs":["Orphanet:2582"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rheumatic disorder","termid":"MONDO:0005554"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myalgia-eosinophilia syndrome associated with tryptophan","secondary_identifiers":["UMLS:C1275050","GARD:18775","MedDRA:10014952","MEDGEN:698358","MESH:D016603"],"termid":"MONDO:0016822","xrefs":{"Monarch":{"xref_id":"0016822"}}}


id: PBO:0086447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative mannosidase involved in ER-associated protein degradation; localizes to the endoplasmic reticulum; sequence similarity with seven-hairpin glycosidase (GH47) family members, such as Mns1p and Mnl1p, that hydrolyze 1,2-linked alpha-D-mannose residues; non-essential gene","termid":"PBO:0086447"}


id: PBO:0043285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain family 4 member M","termid":"PBO:0043285"}


id: MONDO:0013815
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial bent bone dysplasia syndrome","termid":"MONDO:0031615"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bent bone dysplasia syndrome 1","secondary_identifiers":["GARD:10965","UMLS:C3281247","MEDGEN:482877","Orphanet:313855","OMIM:614592"],"synonyms":[{"name":"BBDS","type":"related"},{"name":"FGFR2-related bent bone dysplasia","type":"exact"},{"name":"bent bone dysplasia (BBD)-FGFR2 type","type":"related"},{"name":"bent bone dysplasia syndrome","type":"related"},{"name":"perinatal lethal bent bone dysplasia","type":"exact"}],"termid":"MONDO:0013815","xrefs":{"Monarch":{"xref_id":"0013815"}}}


id: PBO:0029472
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_acid_phosphatase_activity","termid":"PBO:0029472"}


id: PBO:0091941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty-acid amide hydrolase","termid":"PBO:0091941"}


id: GO:0005179
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects; all bind receptors and trigger some biological process.","definition_xrefs":["GOC:dph","GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor ligand activity","termid":"GO:0048018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0140677","GO:0005515","GO:0098772"],"is_obsolete":false,"name":"hormone activity","synonyms":[{"name":"cAMP generating peptide activity","type":"narrow"},{"name":"glycopeptide hormone","type":"narrow"},{"name":"lipopeptide hormone","type":"narrow"},{"name":"peptide hormone","type":"narrow"}],"termid":"GO:0005179"}


id: MONDO:0008115
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Feingold syndrome type 1 (FS1) is a rare inherited malformation syndrome characterized by microcephaly, short stature and numerous digital anomalies.","definition_xrefs":["Orphanet:391641"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Feingold syndrome","termid":"MONDO:0015267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Feingold syndrome type 1","secondary_identifiers":["MEDGEN:1637716","UMLS:C4551774","OMIM:164280","ICD9:759.89","GARD:17624","SCTID:702431004"],"synonyms":[{"name":"Brunner-Winter syndrome type 1","type":"exact"},{"name":"FGLDS1","type":"exact"},{"name":"FS1","type":"exact"},{"name":"Feingold syndrome","type":"related"},{"name":"Feingold syndrome 1","type":"related"},{"name":"Feingold syndrome caused by mutation in MYCN","type":"exact"},{"name":"Feingold syndrome type 1","type":"exact"},{"name":"MMT type 1","type":"exact"},{"name":"MODED syndrome type 1","type":"exact"},{"name":"MYCN Feingold syndrome","type":"exact"},{"name":"Mmt syndrome","type":"related"},{"name":"ODED syndrome type 1","type":"exact"},{"name":"Oded syndrome","type":"related"},{"name":"digital anomalies with short palpebral fissures and atresia of esophagus or duodenum","type":"related"},{"name":"digital anomalies with short palpebral fissures and atresia of esophagus or duodenum type 1","type":"exact"},{"name":"digital anomalies with short palpebral fissures and atresia of oesophagus or duodenum","type":"related"},{"name":"digital anomalies with short palpebral fissures and atresia of oesophagus or duodenum type 1","type":"exact"},{"name":"microcephaly and digital abnormalities with normal intelligence","type":"related"},{"name":"microcephaly, intellectual disability, and tracheoesophageal fistula syndrome","type":"related"},{"name":"microcephaly, mental retardation, and tracheoesophageal fistula syndrome","type":"related"},{"name":"microcephaly-digital anomalies-normal intelligence syndrome type 1","type":"exact"},{"name":"microcephaly-intellectual disability-tracheoesophageal fistula syndrome type 1","type":"exact"},{"name":"microcephaly-oculo-digito-esophageal-duodenal syndrome","type":"related"},{"name":"microcephaly-oculo-digito-esophageal-duodenal syndrome syndrome type 1","type":"exact"},{"name":"oculo-digito-esophageal-duodenal syndrome type 1","type":"exact"},{"name":"oculodigitoesophagoduodenal syndrome","type":"related"}],"termid":"MONDO:0008115","xrefs":{"Monarch":{"xref_id":"0008115"}}}


id: PBO:0051561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 12A","termid":"PBO:0051561"}


id: GO:1903797
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of inorganic anion transmembrane transport.","definition_xrefs":["GO_REF:0000058","PMID:11336802","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transmembrane transport","termid":"GO:0034764"},{"relation_name":"is_a","term_name":"regulation of inorganic anion transmembrane transport","termid":"GO:1903795"},{"relation_name":"positively_regulates","term_name":"inorganic anion transmembrane transport","termid":"GO:0098661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"positive regulation of inorganic anion transmembrane transport","synonyms":[{"name":"activation of inorganic anion membrane transport","type":"narrow"},{"name":"activation of inorganic anion transmembrane transport","type":"narrow"},{"name":"activation of transmembrane inorganic anion transport","type":"narrow"},{"name":"positive regulation of inorganic anion membrane transport","type":"exact"},{"name":"positive regulation of transmembrane inorganic anion transport","type":"exact"},{"name":"up regulation of inorganic anion membrane transport","type":"exact"},{"name":"up regulation of inorganic anion transmembrane transport","type":"exact"},{"name":"up regulation of transmembrane inorganic anion transport","type":"exact"},{"name":"up-regulation of inorganic anion membrane transport","type":"exact"},{"name":"up-regulation of inorganic anion transmembrane transport","type":"exact"},{"name":"up-regulation of transmembrane inorganic anion transport","type":"exact"},{"name":"upregulation of inorganic anion membrane transport","type":"exact"},{"name":"upregulation of inorganic anion transmembrane transport","type":"exact"},{"name":"upregulation of transmembrane inorganic anion transport","type":"exact"}],"termid":"GO:1903797"}


id: PBO:0079153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspanin 13","termid":"PBO:0079153"}


id: SO:0000139
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Region in mRNA where ribosome assembles.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA_region","termid":"SO:0000836"},{"relation_name":"part_of","term_name":"five_prime_UTR","termid":"SO:0000204"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome_entry_site","synonyms":[{"name":"INSDC_feature:regulatory","type":"broad"},{"name":"INSDC_qualifier:ribosome_binding_site","type":"exact"},{"name":"ribosome entry site","type":"exact"}],"termid":"SO:0000139"}


id: GO:0039012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the pronephric sinus over time, from its formation to the mature structure. The pronephric sinus is an ill-defined capillary network that lies between the pronephric tubules.","definition_xrefs":["PMID:10535314","GOC:mtg_kidney_jan10","XAO:0000385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"pronephros development","termid":"GO:0048793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pronephric sinus development","termid":"GO:0039012"}


id: PBO:0049712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAUS augmin like complex subunit 1","termid":"PBO:0049712"}


id: MONDO:0017226
data:
  {"annotated_genes":["SJAG_00564","SJAG_02263"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88378],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009843"},{"annotations":[89060],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012824"}]},"cv_name":"mondo","definition":"Pelizaeus-Merzbacher like disease (PMLD) is an autosomal recessive leukodystrophy sharing identical clinical and radiological features as X-linked Pelizaeus-Merzbacher disease (PMD).","definition_xrefs":["Orphanet:280270"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00564":null,"SJAG_02263":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"Pelizaeus-Merzbacher-like disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4274084","GARD:12300","NANDO:1200577","MEDGEN:894734","NANDO:2201289","icd11.foundation:1101042369","SCTID:717042001"],"synonyms":[{"name":"PMLD","type":"exact"}],"termid":"MONDO:0017226","terms_by_termid":{"MONDO:0009843":null,"MONDO:0012824":null},"xrefs":{"Monarch":{"xref_id":"0017226"}}}


id: MONDO:0024492
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic qualifier indicating that a cancerous lesion is moderately differentiated.","definition_xrefs":["NCIT:C28078"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tumor grade 1 or 2, general grading system","termid":"MONDO:0024495"},{"relation_name":"is_a","term_name":"tumor grade 2 or 3, general grading system","termid":"MONDO:0024496"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor grade 2, general grading system","synonyms":[{"name":"G2","type":"exact"},{"name":"grade 2","type":"exact"},{"name":"grade II","type":"exact"},{"name":"intermediate grade","type":"exact"},{"name":"moderately differentiated","type":"exact"}],"termid":"MONDO:0024492","xrefs":{"Monarch":{"xref_id":"0024492"}}}


id: PBO:0116968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial PPR repeat protein, translation activator for Cox1 Ppr4","termid":"PBO:0116968"}


id: MONDO:0002563
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A somatostatin-producing neuroendocrine tumor that arises from the jejunum. It is characterized by the presence of tubulo-glandular structures.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"jejunal cancer","termid":"MONDO:0006815"},{"relation_name":"is_a","term_name":"jejunal neuroendocrine tumor, well differentiated, low or intermediate grade","termid":"MONDO:0015064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"jejunal somatostatinoma","secondary_identifiers":["UMLS:C1334297","NCIT:C5787","DOID:3216","MEDGEN:233585"],"synonyms":[{"name":"Delta cell tumor of jejunum","type":"exact"},{"name":"Delta cell tumor of the jejunum","type":"exact"},{"name":"Delta cell tumour of jejunum","type":"exact"},{"name":"Delta cell tumour of the jejunum","type":"exact"},{"name":"Somatosatinoma of jejunum","type":"exact"},{"name":"Somatosatinoma of the jejunum","type":"exact"},{"name":"jejunal delta cell somatostatin producing tumor","type":"exact"},{"name":"jejunal delta cell somatostatin producing tumour","type":"exact"},{"name":"jejunal somatostatin producing tumor","type":"exact"},{"name":"jejunal somatostatin producing tumour","type":"exact"},{"name":"jejunal somatostatin-producing NET","type":"exact"},{"name":"jejunal somatostatin-producing neuroendocrine tumor","type":"exact"},{"name":"jejunal somatostatin-producing neuroendocrine tumour","type":"exact"}],"termid":"MONDO:0002563","xrefs":{"Monarch":{"xref_id":"0002563"}}}


id: PBO:0039286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG1 like 15, pseudogene","termid":"PBO:0039286"}


id: PBO:0090118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GID complex subunit Gid4","termid":"PBO:0090118"}


id: GO:0072297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the proximal tubule of the metanephric nephron acquires its identity.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of proximal tubule identity","termid":"GO:0072082"},{"relation_name":"is_a","term_name":"specification of metanephric nephron tubule identity","termid":"GO:0072293"},{"relation_name":"part_of","term_name":"metanephric proximal tubule morphogenesis","termid":"GO:0072288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of metanephric proximal tubule identity","termid":"GO:0072297"}


id: GO:0036062
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A region that surrounds the active zone of the presynaptic plasma membrane, and is specialized for the control of synaptic development.","definition_xrefs":["GOC:sart","PMID:10976048","PMID:18439406"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synaptic membrane","termid":"GO:0097060"},{"relation_name":"part_of","term_name":"presynaptic membrane","termid":"GO:0042734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"presynaptic periactive zone","synonyms":[{"name":"periactive zone","type":"exact"},{"name":"pre-synaptic periactive zone","type":"exact"}],"termid":"GO:0036062"}


id: GO:0006593
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-ornithine, an amino acid only rarely found in proteins, but which is important in living organisms as an intermediate in the reactions of the urea cycle and in arginine biosynthesis.","definition_xrefs":["GOC:jl","ISBN:0192801023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ornithine metabolic process","termid":"GO:0006591"},{"relation_name":"is_a","term_name":"L-amino acid catabolic process","termid":"GO:0170035"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid catabolic process","termid":"GO:0170044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"L-ornithine catabolic process","synonyms":[{"name":"ornithine breakdown","type":"exact"},{"name":"ornithine catabolism","type":"exact"},{"name":"ornithine degradation","type":"exact"}],"termid":"GO:0006593"}


id: GO:0170069
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-containing complex that catalyzes the transfer of a geranyl-geranyl group from geranylgeranyl pyrophosphate to a mono-farnsylated substrate. In humans, the complex is comprised of a prenyltransferase alpha subunit, PTAR1 and beta subunit, RabGGTB, while in budding yeast the prenyltransferase complex contains Ecm9p, the alpha subunit and Bet2p, the beta subunit.","definition_xrefs":["PMID:33035318","PMID:32128853","PMID:40049413","PMID:35628237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005829","GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"geranylgeranyltransferase-III complex","synonyms":[{"name":"GGT3","type":"exact"},{"name":"GGTase-3 complex","type":"exact"},{"name":"GGTase-III complex","type":"exact"},{"name":"GGTase3 complex","type":"exact"},{"name":"geranylgeranyltransferase type 3 complex","type":"exact"},{"name":"geranylgeranyltransferase type-3 complex","type":"exact"},{"name":"type-III geranylgeranyltransferase complex","type":"exact"}],"termid":"GO:0170069"}


id: PBO:0081982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and SCAN domain containing 5D pseudogene","termid":"PBO:0081982"}


id: SO:1001251
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A CDS that is supported by sequence similarity data.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"supported_by_sequence_similarity","termid":"SO:0000907"},{"relation_name":"is_a","term_name":"CDS_predicted","termid":"SO:1001254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDS_supported_by_sequence_similarity_data","synonyms":[{"name":"CDS supported by sequence similarity data","type":"exact"}],"termid":"SO:1001251"}


id: PBO:0090485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin family protein Mpd1","termid":"PBO:0090485"}


id: MONDO:0007831
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insect Stings, hypersensitivity to","secondary_identifiers":["UMLS:C1840171","MEDGEN:327045","OMIM:147540"],"synonyms":[{"name":"insect Stings, hypersensitivity to","type":"exact"}],"termid":"MONDO:0007831","xrefs":{"Monarch":{"xref_id":"0007831"}}}


id: PBO:0083849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Exosome non-catalytic core component; involved in 3'-5' RNA processing and degradation in both the nucleus and the cytoplasm; has similarity to E. coli RNase PH and to human hRrp43p (OIP2, EXOSC8); protein abundance increases in response to DNA replication stress","termid":"PBO:0083849"}


id: PBO:0072645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RTF1 homolog, Paf1/RNA polymerase II complex component","termid":"PBO:0072645"}


id: PBO:0044834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 122 (pseudogene)","termid":"PBO:0044834"}


id: PBO:0061499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuropilin 1","termid":"PBO:0061499"}


id: GO:1900659
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of emericellamide biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of amide metabolic process","termid":"GO:0034249"},{"relation_name":"is_a","term_name":"negative regulation of lipid biosynthetic process","termid":"GO:0051055"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of emericellamide biosynthetic process","termid":"GO:1900658"},{"relation_name":"negatively_regulates","term_name":"emericellamide biosynthetic process","termid":"GO:1900557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"negative regulation of emericellamide biosynthetic process","synonyms":[{"name":"down regulation of emericellamide anabolism","type":"exact"},{"name":"down regulation of emericellamide biosynthesis","type":"exact"},{"name":"down regulation of emericellamide biosynthetic process","type":"exact"},{"name":"down regulation of emericellamide formation","type":"exact"},{"name":"down regulation of emericellamide synthesis","type":"exact"},{"name":"down-regulation of emericellamide anabolism","type":"exact"},{"name":"down-regulation of emericellamide biosynthesis","type":"exact"},{"name":"down-regulation of emericellamide biosynthetic process","type":"exact"},{"name":"down-regulation of emericellamide formation","type":"exact"},{"name":"down-regulation of emericellamide synthesis","type":"exact"},{"name":"downregulation of emericellamide anabolism","type":"exact"},{"name":"downregulation of emericellamide biosynthesis","type":"exact"},{"name":"downregulation of emericellamide biosynthetic process","type":"exact"},{"name":"downregulation of emericellamide formation","type":"exact"},{"name":"downregulation of emericellamide synthesis","type":"exact"},{"name":"inhibition of emericellamide anabolism","type":"exact"},{"name":"inhibition of emericellamide biosynthesis","type":"exact"},{"name":"inhibition of emericellamide biosynthetic process","type":"narrow"},{"name":"inhibition of emericellamide formation","type":"exact"},{"name":"inhibition of emericellamide synthesis","type":"exact"},{"name":"negative regulation of emericellamide anabolism","type":"exact"},{"name":"negative regulation of emericellamide biosynthesis","type":"exact"},{"name":"negative regulation of emericellamide formation","type":"exact"},{"name":"negative regulation of emericellamide synthesis","type":"exact"}],"termid":"GO:1900659"}


id: GO:0035383
data:
  {"annotated_genes":["SJAG_03290","SJAG_04895","SJAG_02006","SJAG_03064","SJAG_00866","SJAG_04007","SJAG_01474","SJAG_00947","SJAG_02769","SJAG_03731","SJAG_03313","SJAG_02741","SJAG_01402","SJAG_04865","SJAG_03349","SJAG_02380","SJAG_03310","SJAG_01989","SJAG_03813","SJAG_04499","SJAG_03715","SJAG_01187","SJAG_01524","SJAG_01139","SJAG_03471","SJAG_02158","SJAG_00902","SJAG_03909"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100187],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006085"},{"annotations":[93252,70350],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019427"},{"annotations":[118915],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990181"},{"annotations":[116209,81864,117624],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006084"},{"annotations":[98630,110554],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006637"},{"annotations":[81915,116767,78908,76046],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019287"},{"annotations":[109312],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035338"},{"annotations":[80617,79020],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035336"},{"annotations":[67292],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001295"},{"annotations":[117344,113227],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:2001211"},{"annotations":[74451,80848,100844,89234,76346,75086,89671],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006086"},{"annotations":[91731,73500],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006104"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a thioester, a compound of general formula RC(=O)SR' in which the linking oxygen in an ester is replaced by a sulfur atom. They are the product of esterification between a carboxylic acid and a thiol.","definition_xrefs":["Wikipedia:Thioester","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00866":null,"SJAG_00902":null,"SJAG_00947":null,"SJAG_01139":null,"SJAG_01187":null,"SJAG_01402":null,"SJAG_01474":null,"SJAG_01524":null,"SJAG_01989":null,"SJAG_02006":null,"SJAG_02158":null,"SJAG_02380":null,"SJAG_02741":null,"SJAG_02769":null,"SJAG_03064":null,"SJAG_03290":null,"SJAG_03310":null,"SJAG_03313":null,"SJAG_03349":null,"SJAG_03471":null,"SJAG_03715":null,"SJAG_03731":null,"SJAG_03813":null,"SJAG_03909":null,"SJAG_04007":null,"SJAG_04499":null,"SJAG_04865":null,"SJAG_04895":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"thioester metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"thioester metabolism","type":"exact"}],"termid":"GO:0035383","terms_by_termid":{"GO:0006084":null,"GO:0006085":null,"GO:0006086":null,"GO:0006104":null,"GO:0006637":null,"GO:0019287":null,"GO:0019427":null,"GO:0035336":null,"GO:0035338":null,"GO:1990181":null,"GO:2001211":null,"GO:2001295":null}}


id: PBO:0003476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleavage factor one Cft1 (predicted)","termid":"PBO:0003476"}


id: GO:0046681
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a carbamate stimulus. Carbamates are a group of insecticides and parasiticides that act by inhibiting cholinesterase.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to insecticide","termid":"GO:0017085"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to carbamate","synonyms":[{"name":"carbamate resistance","type":"related"},{"name":"carbamate susceptibility/resistance","type":"related"}],"termid":"GO:0046681"}


id: PBO:0054417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1813","termid":"PBO:0054417"}


id: PBO:0058618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6750","termid":"PBO:0058618"}


id: GO:0046218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of indolalkylamines, indole or indole derivatives containing a primary, secondary, or tertiary amine group.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete indolalkylamine catabolic process (obsolete GO:0046218)","synonyms":[{"name":"indolalkylamine breakdown","type":"exact"},{"name":"indolalkylamine catabolism","type":"exact"},{"name":"indolalkylamine degradation","type":"exact"}],"termid":"GO:0046218"}


id: PBO:0001847
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Silencing DEfective","termid":"PBO:0001847"}


id: MONDO:0021073
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A classification for rare disorders of diverse organ systems (endocrine, neuromuscular, gastrointestinal, renal, dermatologic, rheumatologic, hematologic) that are affected by substances secreted by a distant neoplasm but not by the action of the neoplasm itself metastasizing to that organ or tissue. Less than 1 % of neoplasms are associated with these syndromes. An immune-mediated response to neoplasm-elaborated proteins may be the cause of these syndromes. Additionally, their manifestation may signal the presence of an occult neoplasm, potentially at an earlier stage of disease thereby leading to a better clinical outcome. Constitutional signs may include fever, night sweats, anorexia and cachexia. Clinical course is usually progressive. Prognosis is variable depending on the effective treatment of the underlying neoplasm.","definition_xrefs":["NCIT:C3311"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"cancer-related condition","termid":"MONDO:0045054"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paraneoplastic syndrome","secondary_identifiers":["MESH:D010257","MEDGEN:45320","UMLS:C0030472","SCTID:49783001"],"synonyms":[{"name":"paraneoplastic syndrome","type":"exact"}],"termid":"MONDO:0021073","xrefs":{"Monarch":{"xref_id":"0021073"}}}


id: PBO:0028641
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_level_during_meiosis","termid":"PBO:0028641"}


id: GO:0038188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by cholecystokinin binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:11181948","GOC:jc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"cholecystokinin signaling pathway","secondary_identifiers":["Wikipedia:Cholecystokinin"],"synonyms":[{"name":"CCK signaling","type":"exact"},{"name":"cholecystokinin receptor signaling pathway","type":"related"}],"termid":"GO:0038188"}


id: PBO:0071321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27a pseudogene 5","termid":"PBO:0071321"}


id: GO:0034313
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a diol, any alcohol containing two hydroxyl groups attached to saturated carbon atoms.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diol metabolic process","termid":"GO:0034311"},{"relation_name":"is_a","term_name":"polyol catabolic process","termid":"GO:0046174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"diol catabolic process","synonyms":[{"name":"dihydric alcohol catabolic process","type":"exact"},{"name":"diol breakdown","type":"exact"},{"name":"diol catabolism","type":"exact"},{"name":"diol degradation","type":"exact"}],"termid":"GO:0034313"}


id: GO:0003754
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Assists in the correct non-covalent assembly of polypeptide-containing structures in vivo, but is not a component of these assembled structures when they are performing their normal biological function.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete chaperone activity (obsolete GO:0003754)","synonyms":[{"name":"chaperone activity","type":"exact"}],"termid":"GO:0003754"}


id: GO:0031058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the covalent alteration of a histone.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone modification (obsolete GO:0031058)","synonyms":[{"name":"activation of histone modification","type":"narrow"},{"name":"stimulation of histone modification","type":"narrow"},{"name":"up regulation of histone modification","type":"exact"},{"name":"up-regulation of histone modification","type":"exact"},{"name":"upregulation of histone modification","type":"exact"}],"termid":"GO:0031058"}


id: GO:0003251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of cell proliferation that contributes to the shaping of a heart valve.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell proliferation involved in heart valve morphogenesis","termid":"GO:0003250"},{"relation_name":"is_a","term_name":"positive regulation of cell proliferation involved in heart morphogenesis","termid":"GO:2000138"},{"relation_name":"positively_regulates","term_name":"cell proliferation involved in heart valve morphogenesis","termid":"GO:0003249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell proliferation involved in heart valve morphogenesis","termid":"GO:0003251"}


id: PBO:0120344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA wybutosine-synthesizing protein 2","termid":"PBO:0120344"}


id: PBO:0049285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase alpha 4","termid":"PBO:0049285"}


id: GO:0060435
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of a bronchiole from an initial condition to its mature state. This process begins with the formation of the bronchiole and ends with the mature structure. A bronchiole is the first airway branch that no longer contains cartilage; it is a branch of the bronchi.","definition_xrefs":["GOC:dph","GOC:mtg_lung"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory tube development","termid":"GO:0030323"},{"relation_name":"part_of","term_name":"lung development","termid":"GO:0030324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bronchiole development","termid":"GO:0060435"}


id: PBO:0039135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aryl hydrocarbon receptor interacting protein like 1","termid":"PBO:0039135"}


id: GO:0062123
data:
  {"annotated_genes":["SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104212],"is_not":false,"summary":null,"term":"GO:0062123"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of linear element maturation.","definition_xrefs":["PMID:30640914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chromosome organization","termid":"GO:0033044"},{"relation_name":"is_a","term_name":"regulation of linear element assembly","termid":"GO:0090006"},{"relation_name":"regulates","term_name":"linear element maturation","termid":"GO:0062121"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0007049"],"is_obsolete":false,"name":"regulation of linear element maturation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0062123","terms_by_termid":{"GO:0062123":null}}


id: PBO:0027272
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_phosphorylation_of_RNA_polymerase_II_C-terminal_domain_serine_2_residues_during_vegetative_growth","termid":"PBO:0027272"}


id: GO:0060728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the rate or frequency of coreceptor activity involved in epidermal growth factor receptor signaling pathway.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of coreceptor activity involved in epidermal growth factor receptor signaling pathway (obsolete GO:0060728)","synonyms":[{"name":"negative regulation of Neu/ErbB-2 receptor activity","type":"narrow"},{"name":"negative regulation of coreceptor activity involved in epidermal growth factor receptor signalling pathway","type":"exact"}],"termid":"GO:0060728"}


id: PBO:0059506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded cytochrome c oxidase II","termid":"PBO:0059506"}


id: PBO:0013449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase domain and HEAT repeat protein Ppk3","termid":"PBO:0013449"}


id: PBO:0048479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosaminyl (N-acetyl) transferase 2 (I blood group)","termid":"PBO:0048479"}


id: MOD:00188
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to 6'-bromo-L-tryptophan.","definition_xrefs":["PubMed:12118011","PubMed:9434739","RESID:AA0179","Unimod:340#W","PubMed:9030520","PubMed:9033387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"halogenated tryptophan","termid":"MOD:01068"},{"relation_name":"is_a","term_name":"monobrominated residue","termid":"MOD:01912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6'-bromo-L-tryptophan","synonyms":[{"name":"(2S)-2-amino-3-(6-bromo-1H-indol-3-yl)propanoic acid","type":"exact"},{"name":"6'-BrTrp","type":"exact"},{"name":"6'-bromo-L-tryptophan","type":"exact"},{"name":"Bromo","type":"related"},{"name":"MOD_RES 6'-bromotryptophan","type":"exact"},{"name":"bromination","type":"related"}],"termid":"MOD:00188"}


id: PATO:0000370
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A directional quality inhering in a bearer by virtue of the bearer's direction from a lower to a higher point.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"direction","termid":"PATO:0000039"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"up","termid":"PATO:0000370"}


id: MONDO:0019673
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"postaxial polydactyly of fingers","termid":"MONDO:0017426"},{"relation_name":"is_a","term_name":"postaxial polydactyly","termid":"MONDO:0020927"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"postaxial polydactyly type A","secondary_identifiers":["icd11.foundation:476330894","UMLS:C3887487","GARD:16817","HP:0005696","MEDGEN:854350","Orphanet:93334","SCTID:715704001"],"synonyms":[{"name":"PAPA","type":"exact"},{"name":"postaxial polydactyly type A","type":"exact"},{"name":"postaxial polydactyly type A (disease)","type":"exact"}],"termid":"MONDO:0019673","xrefs":{"Monarch":{"xref_id":"0019673"}}}


id: GO:1902831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of spinal cord association neuron differentiation.","definition_xrefs":["PMID:21730158","GO_REF:0000058","GOC:mr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of neuron differentiation","termid":"GO:0045666"},{"relation_name":"is_a","term_name":"regulation of spinal cord association neuron differentiation","termid":"GO:1902829"},{"relation_name":"positively_regulates","term_name":"spinal cord association neuron differentiation","termid":"GO:0021527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of spinal cord association neuron differentiation","synonyms":[{"name":"activation of spinal cord association neuron differentiation","type":"narrow"},{"name":"activation of spinal cord dorsal interneuron differentiation","type":"narrow"},{"name":"positive regulation of spinal cord dorsal interneuron differentiation","type":"exact"},{"name":"up regulation of spinal cord association neuron differentiation","type":"exact"},{"name":"up regulation of spinal cord dorsal interneuron differentiation","type":"exact"},{"name":"up-regulation of spinal cord association neuron differentiation","type":"exact"},{"name":"up-regulation of spinal cord dorsal interneuron differentiation","type":"exact"},{"name":"upregulation of spinal cord association neuron differentiation","type":"exact"},{"name":"upregulation of spinal cord dorsal interneuron differentiation","type":"exact"}],"termid":"GO:1902831"}


id: PBO:0059181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRE11 homolog, double strand break repair nuclease pseudogene 1","termid":"PBO:0059181"}


id: MONDO:0019439
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Secondary amyloidosis is a form of amyloidosis, that complicates chronic inflammatory disorders (mainly rheumatoid arthritis) and is characterized by the aggregation and deposition of amyloid fibrils composed of serum amyloid A protein, an acute phase reactant. Although spleen, suprarenal gland, liver and gut are frequent sites of amyloid deposition, the clinical picture is dominated by renal involvement.","definition_xrefs":["Orphanet:85445"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"},{"relation_name":"is_a","term_name":"non-familial restrictive cardiomyopathy","termid":"MONDO:0016345"},{"relation_name":"is_a","term_name":"amyloidosis","termid":"MONDO:0019065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0021179"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0021179","MONDO:0005267"],"is_obsolete":false,"name":"AA amyloidosis","secondary_identifiers":["DOID:0080936","MEDGEN:782429","MedDRA:10039811","UMLS:C3536715","NCIT:C3818","SCTID:281034005","GARD:10560","icd11.foundation:570181034","ICD9:277.39"],"synonyms":[{"name":"amyloid A amyloidosis","type":"related"},{"name":"amyloidosis AA","type":"related"},{"name":"inflammatory amyloidosis","type":"exact"},{"name":"reactive amyloidosis","type":"exact"},{"name":"secondary amyloidosis","type":"exact"}],"termid":"MONDO:0019439","xrefs":{"Monarch":{"xref_id":"0019439"}}}


id: PBO:0068553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 4, pseudogene","termid":"PBO:0068553"}


id: PBO:0017930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OPT oligopeptide transmembrane transporter family Isp4","termid":"PBO:0017930"}


id: PBO:0090329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-phosphate-glucose-glycolipid alpha-glucosyltransferase Alg10, low frequency splice site, possible frameshifted","termid":"PBO:0090329"}


id: MONDO:0100404
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly MLL gene rearrangement. (A molecular abnormality indicating rearrangement of the MLL (KMT2A) gene.)","definition_xrefs":["NCIT:C122623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"acute myeloid leukemia, MLL gene rearrangement","secondary_identifiers":["DOID:0081094","NCIT:C174129"],"synonyms":[{"name":"AML, KMT2A Gene Rearrangement","type":"exact"},{"name":"AML, KMT2A Rearrangement","type":"exact"},{"name":"AML, Lysine (K)-Specific Methyltransferase 2A Gene Rearrangement","type":"exact"},{"name":"AML, Lysine Methyltransferase 2A Gene Rearrangement","type":"exact"},{"name":"AML, MLL Rearrangement","type":"exact"},{"name":"AML, MLL gene rearrangement","type":"exact"},{"name":"AML, Mixed Lineage Leukaemia Gene Rearrangement","type":"exact"},{"name":"AML, Mixed Lineage Leukemia Gene Rearrangement","type":"exact"},{"name":"AML, Myeloid/Lymphoid Leukaemia Gene Rearrangement","type":"exact"},{"name":"AML, Myeloid/Lymphoid Leukemia Gene Rearrangement","type":"exact"},{"name":"AML, Myeloid/Lymphoid or Mixed Lineage Leukaemia Gene Rearrangement","type":"exact"},{"name":"AML, Myeloid/Lymphoid or Mixed Lineage Leukemia Gene Rearrangement","type":"exact"},{"name":"AML, Myeloid/Lymphoid or Mixed-Lineage Leukaemia (Trithorax Homolog, Drosophila) Gene Rearrangement","type":"exact"},{"name":"AML, Myeloid/Lymphoid or Mixed-Lineage Leukemia (Trithorax Homolog, Drosophila) Gene Rearrangement","type":"exact"}],"termid":"MONDO:0100404","xrefs":{"Monarch":{"xref_id":"0100404"}}}


id: GO:0060879
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Creation of the central hole of the semicircular canal by sealing the edges of the pouch that forms during the process of semicircular canal formation.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube closure","termid":"GO:0060606"},{"relation_name":"part_of","term_name":"semicircular canal formation","termid":"GO:0060876"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"semicircular canal fusion","termid":"GO:0060879"}


id: PBO:0042226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin T2 pseudogene 1","termid":"PBO:0042226"}


id: FYPO:0005647
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the kinetochore is divided into two or more parts.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal kinetochore morphology","termid":"FYPO:0005646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"split kinetochore","termid":"FYPO:0005647"}


id: MONDO:0009836
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pancreatitis, sclerosing cholangitis, and sicca complex","secondary_identifiers":["OMIM:260480","UMLS:C1850080","MEDGEN:340461","MESH:C564906"],"synonyms":[{"name":"pancreatitis, sclerosing cholangitis, and sicca complex","type":"exact"}],"termid":"MONDO:0009836","xrefs":{"Monarch":{"xref_id":"0009836"}}}


id: PBO:0083594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a protein, based on available experimental and comparative sequence data; YAR070C has a paralog, YHR214C-B, that arose from a segmental duplication","termid":"PBO:0083594"}


id: FYPO:0007439
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of eisosome is abnormal. For example, an eisosome may protrude into the cell interior. The eisosome consists of a furrow-like plasma membrane sub-domain and associated integral transmembrane proteins, and the proteins (eisosome filaments) that form a scaffolding lattice on the cytoplasmic face.","definition_xrefs":["PomBase:mah","GO:0032126"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal eisosome","termid":"FYPO:0007262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal eisosome morphology","synonyms":[{"name":"abnormal eisosome morphology during mitotic cell cycle","type":"related"},{"name":"abnormal eisosome morphology during vegetative growth","type":"exact"},{"name":"eisosome remodeling","type":"related"}],"termid":"FYPO:0007439"}


id: PBO:0047774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box C1","termid":"PBO:0047774"}


id: MONDO:0018896
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Thrombotic thrombocytopenic purpura (TTP) is an aggressive and life-threatening form of thrombotic microangiopathy (TMA) characterized by profound peripheral thrombocytopenia, microangiopathic hemolytic anemia (MAHA) and organ failure of variable severity and is comprised of congenital TTP and acquired TTP.","definition_xrefs":["Orphanet:54057"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thrombophilia","termid":"MONDO:0002305"},{"relation_name":"is_a","term_name":"thrombocytopenic purpura","termid":"MONDO:0043768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"thrombotic thrombocytopenic purpura","secondary_identifiers":["NANDO:2200649","DOID:10772","UMLS:C0034155","MedDRA:10043648","MESH:D011697","icd11.foundation:1708277768","NANDO:2100189","NANDO:1200316","NCIT:C78797","GARD:16659","MEDGEN:48266","NORD:1769","SCTID:78129009"],"synonyms":[{"name":"Moschcowitz disease","type":"exact"},{"name":"Moschcowitz's syndrome","type":"exact"},{"name":"Moschowitz disease","type":"exact"},{"name":"TTP","type":"exact"}],"termid":"MONDO:0018896","xrefs":{"Monarch":{"xref_id":"0018896"}}}


id: GO:0016275
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: S-adenosyl-L-methionine + (cytochrome c)-arginine = S-adenosyl-L-homocysteine + (cytochrome c)-N(omega)-methyl-arginine.","definition_xrefs":["GOC:ma"],"gene_count":0,"genotype_count":0,"name":"obsolete [cytochrome c]-arginine N-methyltransferase activity (obsolete GO:0016275)","synonyms":[{"name":"S-adenosyl-L-methionine:cytochrome c-arginine nomega-methyltransferasea","type":"related"},{"name":"S-adenosyl-L-methionine:cytochrome c-arginine omega-N-methyltransferasea","type":"related"},{"name":"cytochrome c-arginine N-methyltransferase activity","type":"related"}],"termid":"GO:0016275"}


id: FYPO:0006470
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature ribosomal RNA (rRNA) measured in a cell is lower than normal. Total rRNA or a specific rRNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mature ncRNA level","termid":"FYPO:0006466"},{"relation_name":"is_a","term_name":"altered mature rRNA level during vegetative growth","termid":"FYPO:0006468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"decreased mature rRNA level","synonyms":[{"name":"decreased mature rRNA accumulation","type":"related"},{"name":"decreased mature rRNA level during mitotic cell cycle","type":"related"},{"name":"decreased mature rRNA level during vegetative growth","type":"exact"},{"name":"decreased mature rRNA transcript level","type":"exact"},{"name":"decreased mature ribosomal RNA level","type":"exact"},{"name":"decreased rRNA level","type":"broad"},{"name":"reduced mature rRNA level","type":"exact"}],"termid":"FYPO:0006470"}


id: PBO:0002671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPPDE peptidase family (predicted)","termid":"PBO:0002671"}


id: MONDO:0044972
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease or disorder that involves the eosinophil.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte disorder","termid":"MONDO:0004805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"eosinophil disorder","secondary_identifiers":["UMLS:C1691020","MEDGEN:739396","SCTID:417967008"],"synonyms":[{"name":"disease of eosinophil","type":"exact"},{"name":"disease or disorder of eosinophil","type":"exact"},{"name":"disorder of eosinophil","type":"exact"},{"name":"eosinophil disease or disorder","type":"exact"}],"termid":"MONDO:0044972","xrefs":{"Monarch":{"xref_id":"0044972"}}}


id: FYECO:0000412
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which tunicamycin was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ tunicamycin","synonyms":[{"name":"tunicamycin added","type":"exact"}],"termid":"FYECO:0000412"}


id: GO:0021919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by the binding of a member of the BMP (bone morphogenetic protein) family to a receptor on the surface of a target cell, which contributes to the spatial identity of regions along the dorsal-ventral axis of the spinal cord.","definition_xrefs":["GOC:jid","PMID:12593981","GOC:cls","GOC:dph","GO_REF:0000021","GOC:dgh"],"gene_count":0,"genotype_count":0,"name":"obsolete BMP signaling pathway involved in spinal cord dorsal/ventral patterning (obsolete GO:0021919)","synonyms":[{"name":"BMP signaling pathway in spinal cord dorsoventral patterning","type":"exact"},{"name":"BMP signaling pathway involved in spinal cord dorsal-ventral patterning","type":"exact"},{"name":"BMP signalling pathway involved in spinal cord dorsal-ventral patterning","type":"exact"},{"name":"bone morphogenetic protein signaling pathway in spinal cord dorsal-ventral patterning","type":"exact"},{"name":"bone morphogenetic protein signalling pathway involved in spinal cord dorsal-ventral patterning","type":"exact"}],"termid":"GO:0021919"}


id: PBO:0067817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 119","termid":"PBO:0067817"}


id: MONDO:0003312
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A category of rare neoplasms that arise from the ovary. It includes low grade endometrioid stromal sarcoma and undifferentiated sarcoma.","definition_xrefs":["NCIT:C40065"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"ovarian sarcoma","termid":"MONDO:0002225"},{"relation_name":"is_a","term_name":"ovarian neoplasm","termid":"MONDO:0021068"},{"relation_name":"is_a","term_name":"endometrioid stromal and related neoplasms","termid":"MONDO:0037742"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian endometrioid stromal and related neoplasms","secondary_identifiers":["MEDGEN:926076","UMLS:C4288544","DOID:5169"],"synonyms":[{"name":"endometrioid stromal and related neoplasms of ovary","type":"exact"},{"name":"ovarian endometrioid stromal and related neoplasms","type":"exact"},{"name":"ovarian endometrioid stromal sarcoma","type":"related"},{"name":"ovary endometrioid stromal and related neoplasms","type":"exact"}],"termid":"MONDO:0003312","xrefs":{"Monarch":{"xref_id":"0003312"}}}


id: MONDO:0022551
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A polygenic and multifactorial disease that develops as a result of a complex interplay between genetic susceptibility and environmental and endogenous factors, which leads to the loss of immune tolerance to thyroid antigens and in particular to the TSH receptor.","definition_xrefs":["PMID:26293122"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Basedow's coma","synonyms":[{"name":"Coma basedovicum","type":"related"},{"name":"Karl Adolph von Basedow","type":"related"}],"termid":"MONDO:0022551","xrefs":{"Monarch":{"xref_id":"0022551"}}}


id: PBO:0081483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 365","termid":"PBO:0081483"}


id: GO:0031255
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The area of a motile cell perpendicular to the direction of movement.","definition_xrefs":["GOC:pr","GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral part of cell","termid":"GO:0097574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"lateral part of motile cell","termid":"GO:0031255"}


id: GO:0019710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The methylation of peptidyl-asparagine to form peptidyl-N4-methyl-L-asparagine or peptidyl-N4,N4-dimethyl-L-asparagine.","definition_xrefs":["RESID:AA0311","RESID:AA0070"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-asparagine methylation (obsolete GO:0019710)","termid":"GO:0019710"}


id: PBO:0039551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 45","termid":"PBO:0039551"}


id: PBO:0049760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"host cell factor C2","termid":"PBO:0049760"}


id: PR:Q09948
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rsc4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09948"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin structure-remodeling complex subunit rsc4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1734.15","synonyms":[{"name":"RSC complex subunit rsc4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rsc4","type":"exact"},{"name":"bromodomain-containing protein brd1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09948"}


id: GO:0017159
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-pantetheine + H2O = (R)-pantothenate + cysteamine.","definition_xrefs":["RHEA:13445","EC:3.5.1.92"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016810"],"is_obsolete":false,"name":"pantetheine hydrolase activity","secondary_identifiers":["MetaCyc:3.5.1.92-RXN","Reactome:R-HSA-8938300","KEGG_REACTION:R02973"],"synonyms":[{"name":"(R)-pantetheine amidohydrolase activity","type":"related"},{"name":"pantetheinase activity","type":"related"},{"name":"vanin","type":"related"},{"name":"vanin-1","type":"related"}],"termid":"GO:0017159"}


id: FYPO:0005239
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-tyrosine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular amino acid level","termid":"FYPO:0003986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular tyrosine level","synonyms":[{"name":"increased cellular L-tyrosine level","type":"exact"},{"name":"increased cellular tyrosine level during mitotic cell cycle","type":"related"},{"name":"increased cellular tyrosine level during vegetative growth","type":"exact"},{"name":"increased tyrosine accumulation","type":"related"}],"termid":"FYPO:0005239"}


id: MONDO:0006693
data:
  {"annotated_genes":["SJAG_03145"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87738],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013542"}]},"cv_name":"mondo","definition":"Pathological conditions of intracranial arteries supplying the cerebrum. These diseases often are due to abnormalities or pathological processes in the anterior cerebral artery; middle cerebral artery; and posterior cerebral artery.","definition_xrefs":["MESH:D002539"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracranial arterial disease","termid":"MONDO:0006808"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03145":null},"genotype_count":0,"is_obsolete":false,"name":"cerebral arterial disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:3527","EFO:1000859","MEDGEN:2963","UMLS:C0007774"],"termid":"MONDO:0006693","terms_by_termid":{"MONDO:0013542":null},"xrefs":{"Monarch":{"xref_id":"0006693"}}}


id: GO:0009017
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-succinyl-L-glutamate + H2O = L-glutamate + succinate.","definition_xrefs":["EC:3.5.1.96","RHEA:15169"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016810"],"is_obsolete":false,"name":"succinylglutamate desuccinylase activity","secondary_identifiers":["MetaCyc:SUCCGLUDESUCC-RXN","KEGG_REACTION:R00411"],"synonyms":[{"name":"AstE","type":"related"},{"name":"N-succinyl-L-glutamate amidohydrolase activity","type":"related"},{"name":"N2-succinylglutamate desuccinylase activity","type":"exact"},{"name":"SGDS","type":"related"}],"termid":"GO:0009017"}


id: PR:P87141
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A regulatory-associated protein of mTOR that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00613"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat-containing protein mip1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A7.11","secondary_identifiers":["UniProtKB:P87141"],"synonyms":[{"name":"Spom972h-RPTOR","type":"exact"}],"termid":"PR:P87141"}


id: FYPO:0006086
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which one or more bridges consisting of unresolved intertwined sister chromatids form following replication fork arrest, and persist until mitotic anaphase. Bridges contain dsDNA and RPA-bound ssDNA, and may break, resulting in unequal sister chromatid segregation.","definition_xrefs":["PMID:28475874","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal replication fork processing","termid":"FYPO:0003586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000293"],"is_obsolete":false,"name":"increased mitotic sister chromatid bridge formation during replication fork processing","synonyms":[{"name":"anaphase bridge formation following replication fork processing","type":"related"}],"termid":"FYPO:0006086"}


id: GO:0047253
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetyl-beta-D-glucosaminyl-1,6-beta-D-(N-acetyl-B-glucosaminyl-1,2)-beta-D-mannosyl-R + UDP-N-acetyl-D-glucosamine = N-acetyl-beta-D-glucosaminyl-1,6-beta-D-(N-acetyl-D-glucosaminyl-1,2-beta)-(N-acetyl-D-glucosaminyl-1,4-beta)-D-mannosyl-R + UDP.","definition_xrefs":["MetaCyc:2.4.1.201-RXN","EC:2.4.1.201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a glycoprotein","termid":"GO:0140103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0140096","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"alpha-1,6-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity","secondary_identifiers":["RHEA:19945"],"synonyms":[{"name":"N-acetylglucosaminyltransferase VI activity","type":"related"},{"name":"N-glycosyl-oligosaccharide-glycoprotein N-acetylglucosaminyltransferase VI activity","type":"related"},{"name":"UDP-N-acetyl-D-glucosamine:2,6-bis(N-acetyl-beta-D-glucosaminyl)-alpha-D-mannosyl-glycoprotein 4-beta-N-acetyl-D-glucosaminyltransferase activity","type":"related"},{"name":"alpha-1,6-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase activity","type":"exact"},{"name":"mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyl-transferase activity","type":"exact"},{"name":"mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine-glycopeptide beta-1->4-acetylglucosaminyltransferase VI","type":"related"},{"name":"uridine diphosphoacetylglucosamine-glycopeptide beta-1->4-acetylglucosaminyltransferase VI activity","type":"related"}],"termid":"GO:0047253"}


id: PBO:0055724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lamin tail domain containing 1","termid":"PBO:0055724"}


id: MONDO:0014369
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Postaxial polydactyly-anterior pituitary anomalies-facial dysmorphism syndrome is a rare, genetic developmental defect during embryogenesis characterized primarily by congenital hypopituitarism and/or postaxial polydactyly. It can be associated with short stature, delayed bone age, hypogonadotropic hypogonadism, and/or midline facial defects (e.g. hypotelorism, mild midface hypoplasia, flat nasal bridge, and cleft lip and/or palate). Hypoplastic anterior pituitary and ectopic posterior pituitary lobe are frequent findings on MRI examination.","definition_xrefs":["Orphanet:420584"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"non-acquired combined pituitary hormone deficiency","termid":"MONDO:0018762"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0000426"],"is_obsolete":false,"name":"postaxial polydactyly-anterior pituitary anomalies-facial dysmorphism syndrome","secondary_identifiers":["UMLS:C4014479","OMIM:615849","DOID:0080328","GARD:13349","MEDGEN:862916"],"synonyms":[{"name":"CJS","type":"related"},{"name":"Culler-Jones syndrome","type":"related"},{"name":"Pallister-Hall syndrome 2","type":"related"},{"name":"Pallister-Hall syndrome 2, formerly","type":"related"}],"termid":"MONDO:0014369","xrefs":{"Monarch":{"xref_id":"0014369"}}}


id: PR:O60079
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ubp12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin carboxyl-terminal hydrolase 12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1494.05c","synonyms":[{"name":"Spom972h-ubp12","type":"exact"},{"name":"deubiquitinating enzyme 12 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin thioesterase 12 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-specific-processing protease 12 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60079"}


id: GO:1905397
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in an activated CD8-positive, alpha-beta T cell.","definition_xrefs":["GOC:TermGenie","GO_REF:0000085","PMID:24187568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell apoptotic process","termid":"GO:0070231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"activated CD8-positive, alpha-beta T cell apoptotic process","synonyms":[{"name":"activated CD8-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"activated CD8-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"activated CD8-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"activated CD8-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"activated CD8-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"activated CD8-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"activated CD8-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"}],"termid":"GO:1905397"}


id: PBO:0027806
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_KT5926","termid":"PBO:0027806"}


id: PR:O60175
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein Hikeshi that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein OPI10 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21H7.06c","secondary_identifiers":["UniProtKB:O60175"],"synonyms":[{"name":"Spom972h-C11orf73","type":"exact"}],"termid":"PR:O60175"}


id: PATO:0001588
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A variability of rate which is relatively low.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"variability of rate","termid":"PATO:0001586"},{"relation_name":"is_a","term_name":"decreased process quality","termid":"PATO:0002302"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased variability of rate","synonyms":[{"name":"low variability of rate","type":"exact"}],"termid":"PATO:0001588"}


id: GO:2000460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of eukaryotic cell surface binding.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of eukaryotic cell surface binding (obsolete GO:2000460)","synonyms":[{"name":"regulation of eukaryotic cell surface binding","type":"exact"}],"termid":"GO:2000460"}


id: FYPO:0004700
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is bent along the long axis. In a bent cell, the long axis has one or more angles, rather than following a straight line.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell shape","termid":"FYPO:0002196"},{"relation_name":"is_a","term_name":"bent cell","termid":"FYPO:0005793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000005","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"bent vegetative cell","synonyms":[{"name":"bent cell during vegetative growth","type":"exact"},{"name":"bent vegetative cell during mitotic cell cycle","type":"related"},{"name":"cell morphology, bent during vegetative growth","type":"exact"}],"termid":"FYPO:0004700"}


id: PBO:0056140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LZTS1 antisense RNA 1","termid":"PBO:0056140"}


id: MONDO:0007893
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare multisystem genetic disorder characterized by lentigines, hypertrophic cardiomyopathy, short stature, pectus deformity, and dysmorphic facial features.","definition_xrefs":["Orphanet:500"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"Noonan syndrome and Noonan-related syndrome","termid":"MONDO:0020297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0000426"],"is_obsolete":false,"name":"Noonan syndrome with multiple lentigines","secondary_identifiers":["SCTID:111306001","MESH:D044542","NCIT:C84820","GARD:1100","NORD:1360","MedDRA:10062901","DOID:14291","UMLS:C0175704","MEDGEN:104494","ICD9:709.09","OMIMPS:151100"],"synonyms":[{"name":"Capute-Rimoin-Konigsmark-Esterly-Richardson syndrome","type":"exact"},{"name":"Cardiomyopathic lentiginosis","type":"exact"},{"name":"Gorlin syndrome II","type":"exact"},{"name":"LEOPARD syndrome","type":"exact"},{"name":"Moynahan syndrome","type":"related"},{"name":"Noonan syndrome with multiple lentigines","type":"exact"},{"name":"familial multiple lentigines syndrome","type":"exact"},{"name":"generalised lentiginosis","type":"exact"},{"name":"generalized lentiginosis","type":"exact"},{"name":"lentigines, electrocardiographic conduction abnormalities, ocular hypertelorism, pulmonic stenosis, abnormal genitalia, retardation of growth, Deafnes","type":"related"},{"name":"lentigines, electrocardiographic conduction defects, 0cular hypertelorism, pulmonary stenosis, abnormalities of the genitals, retarded Growth, deafness","type":"exact"},{"name":"lentiginosis profusa syndrome","type":"exact"},{"name":"progressive cardiomyopathic lentiginosis","type":"exact"}],"termid":"MONDO:0007893","xrefs":{"Monarch":{"xref_id":"0007893"}}}


id: MONDO:0019688
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete sulfation-related bone disorder (obsolete MONDO:0019688)","secondary_identifiers":["Orphanet:93423"],"synonyms":[{"name":"inborn error of sulphation","type":"exact"},{"name":"sulphation disorder","type":"exact"}],"termid":"MONDO:0019688","xrefs":{"Monarch":{"xref_id":"0019688"}}}


id: PBO:0004389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L29","termid":"PBO:0004389"}


id: PBO:0059090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MORC2 antisense RNA 1","termid":"PBO:0059090"}


id: GO:0010875
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of cholesterol efflux. Cholesterol efflux is the directed movement of cholesterol, cholest-5-en-3-beta-ol, out of a cell or organelle.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cholesterol efflux","termid":"GO:0010874"},{"relation_name":"is_a","term_name":"positive regulation of cholesterol transport","termid":"GO:0032376"},{"relation_name":"positively_regulates","term_name":"cholesterol efflux","termid":"GO:0033344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of cholesterol efflux","termid":"GO:0010875"}


id: GO:0045606
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of epidermal cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell differentiation","termid":"GO:0030858"},{"relation_name":"is_a","term_name":"regulation of epidermal cell differentiation","termid":"GO:0045604"},{"relation_name":"is_a","term_name":"positive regulation of epidermis development","termid":"GO:0045684"},{"relation_name":"positively_regulates","term_name":"epidermal cell differentiation","termid":"GO:0009913"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of epidermal cell differentiation","synonyms":[{"name":"activation of epidermal cell differentiation","type":"narrow"},{"name":"positive regulation of hypodermal cell differentiation","type":"related"},{"name":"stimulation of epidermal cell differentiation","type":"narrow"},{"name":"up regulation of epidermal cell differentiation","type":"exact"},{"name":"up-regulation of epidermal cell differentiation","type":"exact"},{"name":"upregulation of epidermal cell differentiation","type":"exact"}],"termid":"GO:0045606"}


