# terms

id: PBO:0030241
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_tunicamycin","termid":"PBO:0030241"}


id: PBO:0044818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 109A (pseudogene)","termid":"PBO:0044818"}


id: GO:1902383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 11-oxo-beta-amyrin.","definition_xrefs":["GOC:TermGenie","PMID:22128119"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentacyclic triterpenoid biosynthetic process","termid":"GO:0019745"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"11-oxo-beta-amyrin metabolic process","termid":"GO:1902381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"11-oxo-beta-amyrin biosynthetic process","synonyms":[{"name":"11-oxo-beta-amyrin anabolism","type":"exact"},{"name":"11-oxo-beta-amyrin biosynthesis","type":"exact"},{"name":"11-oxo-beta-amyrin formation","type":"exact"},{"name":"11-oxo-beta-amyrin synthesis","type":"exact"}],"termid":"GO:1902383"}


id: PBO:0114605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endocytic adaptor, ENTH/VHS domain Yap18","termid":"PBO:0114605"}


id: PBO:0062598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily J member 8 pseudogene","termid":"PBO:0062598"}


id: SO:0000214
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding aspartyl tRNA (SO:0000257).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_primary_transcript","termid":"SO:0000210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartic_acid_tRNA_primary_transcript","synonyms":[{"name":"aspartic acid tRNA primary transcript","type":"exact"}],"termid":"SO:0000214"}


id: MONDO:0005780
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any infection caused by a virus of the genus Hantavirus, which is transmitted by aerosolized rodent excreta or rodent bites, that can result in a variety of clinical manifestations from hemorrhagic fever with renal syndrome to a pulmonary syndrome.","definition_xrefs":["NCIT:C3899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bunyaviridae infectious disease","termid":"MONDO:0021641"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hantavirus infectious disease","secondary_identifiers":["MEDGEN:67028","UMLS:C0242994","ICD9:079.81","SCTID:359761005","MONDO:0042492","EFO:0007295","MESH:D018778"],"synonyms":[{"name":"Hantavirus caused disease or disorder","type":"exact"},{"name":"Hantavirus disease or disorder","type":"exact"},{"name":"Hantavirus infection","type":"exact"},{"name":"Hantavirus infectious disease","type":"exact"},{"name":"disease caused by hantavirus","type":"related"},{"name":"disease due to hantavirus","type":"exact"},{"name":"infections, Hantavirus","type":"related"}],"termid":"MONDO:0005780","xrefs":{"Monarch":{"xref_id":"0005780"}}}


id: PBO:0056831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase","termid":"PBO:0056831"}


id: GO:0002763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of myeloid leukocyte differentiation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myeloid leukocyte differentiation","termid":"GO:0002761"},{"relation_name":"is_a","term_name":"positive regulation of myeloid cell differentiation","termid":"GO:0045639"},{"relation_name":"is_a","term_name":"positive regulation of leukocyte differentiation","termid":"GO:1902107"},{"relation_name":"positively_regulates","term_name":"myeloid leukocyte differentiation","termid":"GO:0002573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of myeloid leukocyte differentiation","synonyms":[{"name":"activation of myeloid leukocyte differentiation","type":"narrow"},{"name":"stimulation of myeloid leukocyte differentiation","type":"narrow"},{"name":"up regulation of myeloid leukocyte differentiation","type":"exact"},{"name":"up-regulation of myeloid leukocyte differentiation","type":"exact"},{"name":"upregulation of myeloid leukocyte differentiation","type":"exact"}],"termid":"GO:0002763"}


id: PBO:0070821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13","termid":"PBO:0070821"}


id: PBO:0066492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ret finger protein like 4A pseudogene 3","termid":"PBO:0066492"}


id: PBO:0051991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JAKMIP2 antisense RNA 1","termid":"PBO:0051991"}


id: MONDO:0007076
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ocular albinism with sensorineural deafness (obsolete MONDO:0007076)","termid":"MONDO:0007076","xrefs":{"Monarch":{"xref_id":"0007076"}}}


id: GO:0061930
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of erythrocyte enucleation.","definition_xrefs":["PMID:25241935"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"is_a","term_name":"regulation of cell maturation","termid":"GO:1903429"},{"relation_name":"regulates","term_name":"erythrocyte enucleation","termid":"GO:0043131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of erythrocyte enucleation","termid":"GO:0061930"}


id: MONDO:0020368
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Axenfeld's anomaly is a rare congenital ocular defect caused by anterior segment dysgenesis and is characterized by anteriorly displaced Schwalbe's line and iris bands extending into the cornea. In contrast, Rieger's anomaly includes characteristic iris and pupil anomalies.","definition_xrefs":["Orphanet:98978"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete goniodysgenesis (obsolete MONDO:0020218)","termid":"MONDO:0020218"},{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Axenfeld anomaly","secondary_identifiers":["SCTID:204152008","ICD9:743.44","MEDGEN:78611","UMLS:C0266548","icd11.foundation:1703498511","MedDRA:10058653","GARD:16485"],"termid":"MONDO:0020368","xrefs":{"Monarch":{"xref_id":"0020368"}}}


id: PBO:0072367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 53","termid":"PBO:0072367"}


id: PBO:0039543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 40","termid":"PBO:0039543"}


id: SO:0000370
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-coding RNA less than 200 nucleotides long, usually with a specific secondary structure, that acts to regulate gene expression. These include short ncRNAs such as piRNA, miRNA and siRNAs (among others).","definition_xrefs":["PomBase:al","SO:ma","PMID:28541282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sncRNA","termid":"SO:0002247"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small_regulatory_ncRNA","synonyms":[{"name":"small regulatory ncRNA","type":"exact"}],"termid":"SO:0000370"}


id: GO:0019313
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving allose, allo-hexose, an aldohexose similar to glucose, differing only in the configuration of the hydroxyl group of C-3.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete allose metabolic process (obsolete GO:0019313)","synonyms":[{"name":"allose metabolism","type":"exact"}],"termid":"GO:0019313"}


id: PBO:0040886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone morphogenetic protein 8b","termid":"PBO:0040886"}


id: PBO:0087901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor; involved in regulation of invasive growth and starch degradation; controls the activation of FLO11 and STA2 in response to nutritional signals; forms a heterodimer with Flo8p that interacts with the Swi/Snf complex during transcriptional activation of FLO1, FLO11, and STA1","termid":"PBO:0087901"}


id: PBO:0066262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBMX pseudogene 2","termid":"PBO:0066262"}


id: MONDO:0044216
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete artichoke, modification of taste by (obsolete MONDO:0044216)","secondary_identifiers":["OMIM:108320"],"synonyms":[{"name":"artichoke, modification of taste by","type":"related"}],"termid":"MONDO:0044216","xrefs":{"Monarch":{"xref_id":"0044216"}}}


id: MONDO:0002478
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A biphasic neoplasm that arises from the ovary or the testis. It is characterized by the presence of neoplastic germ cells and neoplastic sex cord-stromal cells. It includes the gonadoblastoma and mixed germ cell-sex cord stromal tumor, unclassifiable.","definition_xrefs":["NCIT:C5241"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mixed neoplasm","termid":"MONDO:0021043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mixed germ cell-sex cord-stromal tumor","secondary_identifiers":["UMLS:C1321220","MEDGEN:232941","DOID:2996"],"synonyms":[{"name":"mixed germ cell-Sex cord neoplasm","type":"exact"},{"name":"mixed germ cell-Sex cord tumor","type":"exact"},{"name":"mixed germ cell-Sex cord tumour","type":"exact"},{"name":"mixed germ cell-Sex cord-stromal neoplasm","type":"exact"},{"name":"mixed germ cell-Sex cord-stromal tumor","type":"exact"},{"name":"mixed germ cell-Sex cord-stromal tumour","type":"exact"},{"name":"mixed germ cell-sex cord-stromal tumor (morphologic abnormality)","type":"exact"},{"name":"mixed germ cell-sex cord-stromal tumour (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0002478","xrefs":{"Monarch":{"xref_id":"0002478"}}}


id: GO:0019858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cytosine, 4-amino-2-hydroxypyrimidine, a pyrimidine derivative that is one of the five main bases found in nucleic acids; it occurs widely in cytidine derivatives.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase metabolic process","termid":"GO:0006206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"cytosine metabolic process","synonyms":[{"name":"cytosine metabolism","type":"exact"}],"termid":"GO:0019858"}


id: PBO:0057685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1273h","termid":"PBO:0057685"}


id: GO:0090444
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the consistent predetermined time point at which a nematode larva progresses from an initial condition to a later condition and the rate at which this time point is reached.","definition_xrefs":["PMID:17550772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of development, heterochronic","termid":"GO:0040034"},{"relation_name":"is_a","term_name":"regulation of nematode larval development","termid":"GO:0061062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of nematode larval development, heterochronic","termid":"GO:0090444"}


id: PBO:0061069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFKB activating protein pseudogene 1","termid":"PBO:0061069"}


id: PBO:0086348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTEN homolog with no demonstrated inositol lipid phosphatase activity; plays a role in normal sporulation; homolog of human tumor suppressor gene PTEN/MMAC1/TEP1 and fission yeast ptn1","termid":"PBO:0086348"}


id: PBO:0083923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fructose-1,6-bisphosphatase; key regulatory enzyme in the gluconeogenesis pathway, required for glucose metabolism; undergoes either proteasome-mediated or autophagy-mediated degradation depending on growth conditions; glucose starvation results in redistribution to the periplasm; interacts with Vid30p","termid":"PBO:0083923"}


id: MONDO:0016775
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lichen planus (LP) pemphigoides is a rare cross-over syndrome between lichen planus and bullous pemphigoid.","definition_xrefs":["Orphanet:254478"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lichen planus","termid":"MONDO:0006572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"lichen planus pemphigoides","secondary_identifiers":["icd11.foundation:1373932539","GARD:12677","MEDGEN:590352","UMLS:C0406369","SCTID:238653005"],"synonyms":[{"name":"LP pemphigoides","type":"exact"}],"termid":"MONDO:0016775","xrefs":{"Monarch":{"xref_id":"0016775"}}}


id: PBO:0044870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENN domain containing 2D","termid":"PBO:0044870"}


id: FYPO:0000550
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which pseudohyphal growth is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell growth","termid":"FYPO:0002862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal pseudohyphal growth","secondary_identifiers":["FYPO:0000435"],"synonyms":[{"name":"abnormal filamentous growth","type":"broad"},{"name":"filamentous growth: abnormal","type":"broad"},{"name":"pseudohyphal growth: abnormal","type":"related"}],"termid":"FYPO:0000550"}


id: MONDO:0001337
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"seborrheic keratosis","termid":"MONDO:0008420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"inflamed seborrheic keratosis","secondary_identifiers":["DOID:11685","ICD10CM:L82.0","ICD9:702.11","UMLS:C0376117","SCTID:442348004","MEDGEN:580965"],"termid":"MONDO:0001337","xrefs":{"Monarch":{"xref_id":"0001337"}}}


id: FYPO:0003837
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of RNA polymerase II carboxy-terminal domain kinase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein kinase activity","termid":"FYPO:0002700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000654","FYPO:0000652","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"increased RNA polymerase II carboxy-terminal domain kinase activity","termid":"FYPO:0003837"}


id: PBO:0005324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial outer membrane ATPase Msp1 (predicted)","termid":"PBO:0005324"}


id: FYPO:0005176
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of ferric-chelate reductase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal ferric-chelate reductase activity","termid":"FYPO:0001847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000654","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"increased ferric-chelate reductase activity","termid":"FYPO:0005176"}


id: PBO:0083316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps ORF GAT1/YFL021W","termid":"PBO:0083316"}


id: PBO:0082897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cyclin, interacts with cyclin-dependent kinase Pho85p; member of the Pcl1,2-like subfamily, involved in the regulation of polarized growth and morphogenesis and progression through the cell cycle; is ubiquitinated by Dma1p; phosphorylation by Pho85p targets it for degradation; localizes to sites of polarized cell growth","termid":"PBO:0082897"}


id: GO:0016558
data:
  {"annotated_genes":["SJAG_02797","SJAG_03440","SJAG_01165","SJAG_02997","SJAG_04857","SJAG_00891","SJAG_03324","SJAG_04428","SJAG_00702","SJAG_02034","SJAG_00326","SJAG_02619","SJAG_05315","SJAG_02693","SJAG_05950"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71882,72395,73790,75060,81410,98290,104082,113246],"is_not":false,"summary":null,"term":"GO:0016558"},{"annotations":[75452,63446,72420],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016560"},{"annotations":[65297,117161,100386,119174],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016562"}]},"cv_name":"biological_process","definition":"The import of proteins into the peroxisomal matrix. A peroxisome targeting signal (PTS) binds to a soluble receptor protein in the cytosol, and the resulting complex then binds to a receptor protein in the peroxisome membrane and is imported. The cargo protein is then released into the peroxisome matrix.","definition_xrefs":["PMID:11687502","ISBN:0716731363","PMID:11988772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisomal membrane transport","termid":"GO:0015919"},{"relation_name":"is_a","term_name":"protein transmembrane import into intracellular organelle","termid":"GO:0044743"},{"relation_name":"is_a","term_name":"protein localization to peroxisome","termid":"GO:0072662"},{"relation_name":"is_a","term_name":"establishment of protein localization to peroxisome","termid":"GO:0072663"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00326":null,"SJAG_00702":null,"SJAG_00891":null,"SJAG_01165":null,"SJAG_02034":null,"SJAG_02619":null,"SJAG_02693":null,"SJAG_02797":null,"SJAG_02997":null,"SJAG_03324":null,"SJAG_03440":null,"SJAG_04428":null,"SJAG_04857":null,"SJAG_05315":null,"SJAG_05950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007031"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0007031","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"protein import into peroxisome matrix","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"peroxisome matrix protein import","type":"exact"},{"name":"protein transport to peroxisome matrix","type":"exact"}],"termid":"GO:0016558","terms_by_termid":{"GO:0016558":null,"GO:0016560":null,"GO:0016562":null}}


id: GO:0102749
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H+ + dihydrogeranylgeranyl-chlorophyll a + NADPH = tetrahydrogeranylgeranyl-chlorophyll a + NADP.","definition_xrefs":["GOC:pz","EC:1.3.1.-"],"gene_count":0,"genotype_count":0,"name":"obsolete dihydrogeranylgeranyl-chlorophyll a reductase activity (obsolete GO:0102749)","termid":"GO:0102749"}


id: FYPO:0006066
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of a protein to one or more alpha/beta tubulin heterodimers does not occur. The affected protein may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein-protein interaction","termid":"FYPO:0000705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000702","FYPO:0001985","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"abolished tubulin heterodimer binding","synonyms":[{"name":"abolished protein-protein interaction with tubulin dimer","type":"exact"},{"name":"abolished protein-protein interaction with tubulin heterodimer","type":"exact"},{"name":"abolished tubulin dimer binding","type":"exact"},{"name":"tubulin heterodimer binding abolished","type":"exact"}],"termid":"FYPO:0006066"}


id: GO:0006282
data:
  {"annotated_genes":["SJAG_02058","SJAG_01205","SJAG_00823","SJAG_03160","SJAG_04457","SJAG_03048","SJAG_00573","SJAG_02104","SJAG_00369","SJAG_03695","SJAG_03417"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104187],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001033"},{"annotations":[113614],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904332"},{"annotations":[119143,113892],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045739"},{"annotations":[95697,112031],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000781"},{"annotations":[112778],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905168"},{"annotations":[109244],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001034"},{"annotations":[74367,92723],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000779"},{"annotations":[111164],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010569"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of DNA repair.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA metabolic process","termid":"GO:0051052"},{"relation_name":"is_a","term_name":"regulation of cellular response to stress","termid":"GO:0080135"},{"relation_name":"regulates","term_name":"DNA repair","termid":"GO:0006281"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00369":null,"SJAG_00573":null,"SJAG_00823":null,"SJAG_01205":null,"SJAG_02058":null,"SJAG_02104":null,"SJAG_03048":null,"SJAG_03160":null,"SJAG_03417":null,"SJAG_03695":null,"SJAG_04457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0006281","GO:0008150"],"is_obsolete":false,"name":"regulation of DNA repair","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0006282","terms_by_termid":{"GO:0010569":null,"GO:0045739":null,"GO:1904332":null,"GO:1905168":null,"GO:2000779":null,"GO:2000781":null,"GO:2001033":null,"GO:2001034":null}}


id: MONDO:0019508
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Van der Woude syndrome (VWS) is a rare congenital genetic dysmorphic syndrome characterized by paramedian lower-lip fistulae, cleft lip with or without cleft palate, or isolated cleft palate.","definition_xrefs":["Orphanet:888"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome or malformation associated with head and neck malformations (obsolete MONDO:0015501)","termid":"MONDO:0015501"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"IRF6-related condition","termid":"MONDO:1040010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"van der Woude syndrome","secondary_identifiers":["GARD:8414","icd11.foundation:133440037","DOID:0060239","MESH:C536528","MEDGEN:61233","SCTID:79261008","ICD9:744.89","UMLS:C0175697","NCIT:C74986"],"synonyms":[{"name":"LPS","type":"related"},{"name":"VWS","type":"exact"},{"name":"cleft lip and/or palate with mucous cysts of lower lip","type":"related"},{"name":"cleft lip/palate with mucous cysts of lower lip","type":"exact"},{"name":"lip pit syndrome","type":"related"},{"name":"lip-pit syndrome","type":"exact"}],"termid":"MONDO:0019508","xrefs":{"Monarch":{"xref_id":"0019508"}}}


id: PBO:0003125
data:
  {"annotation_feature_type":"gene","cv_name":"ex_tools","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monoclonal antibodies","termid":"PBO:0003125"}


id: PBO:0047588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor receptor like 1","termid":"PBO:0047588"}


id: MONDO:0032619
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex I deficiency, nuclear type","termid":"MONDO:0100223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial complex 1 deficiency, nuclear type 14","secondary_identifiers":["GARD:16322","UMLS:C4748777","DOID:0112094","OMIM:618236","MEDGEN:1648440"],"synonyms":[{"name":"MC1DN14","type":"related"},{"name":"MITOCHONDRIAL COMPLEX I DEFICIENCY, NUCLEAR TYPE 14","type":"related"}],"termid":"MONDO:0032619","xrefs":{"Monarch":{"xref_id":"0032619"}}}


id: GO:0005777
data:
  {"annotated_genes":["SJAG_02247","SJAG_05950","SJAG_02496","SJAG_00706","SJAG_03715","SJAG_03671","SJAG_04146","SJAG_02384","SJAG_00891","SJAG_03440","SJAG_03324","SJAG_04315","SJAG_04823","SJAG_02630","SJAG_04299","SJAG_03166","SJAG_03091","SJAG_04467","SJAG_03781","SJAG_02619","SJAG_00326","SJAG_04428","SJAG_02848","SJAG_00947","SJAG_04763","SJAG_00114","SJAG_01474","SJAG_02693","SJAG_01685","SJAG_03464","SJAG_00702","SJAG_03493","SJAG_02997","SJAG_01165"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71988,73297,74131,75359,76043,78025,81544,101662,111463,115793],"is_not":false,"summary":null,"term":"GO:0005777"},{"annotations":[72393,116605,117622,120169,61604,107134,113700],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005782"},{"annotations":[77617,81409,79872,59366,79504,72419,77261,98769,120044,75449,82100,108523,117623,73481,100385,117160,80239,75057,92238],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005778"}]},"cv_name":"cellular_component","definition":"A small organelle enclosed by a single membrane, and found in most eukaryotic cells. Contains peroxidases and other enzymes involved in a variety of metabolic processes including free radical detoxification, lipid catabolism and biosynthesis, and hydrogen peroxide metabolism.","definition_xrefs":["GOC:pm","PMID:9302272","UniProtKB-KW:KW-0576"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microbody","termid":"GO:0042579"}],"gene_count":34,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_00326":null,"SJAG_00702":null,"SJAG_00706":null,"SJAG_00891":null,"SJAG_00947":null,"SJAG_01165":null,"SJAG_01474":null,"SJAG_01685":null,"SJAG_02247":null,"SJAG_02384":null,"SJAG_02496":null,"SJAG_02619":null,"SJAG_02630":null,"SJAG_02693":null,"SJAG_02848":null,"SJAG_02997":null,"SJAG_03091":null,"SJAG_03166":null,"SJAG_03324":null,"SJAG_03440":null,"SJAG_03464":null,"SJAG_03493":null,"SJAG_03671":null,"SJAG_03715":null,"SJAG_03781":null,"SJAG_04146":null,"SJAG_04299":null,"SJAG_04315":null,"SJAG_04428":null,"SJAG_04467":null,"SJAG_04763":null,"SJAG_04823":null,"SJAG_05950":null},"genotype_count":0,"in_subsets":["cc_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"peroxisome","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000044":null,"GO_REF:0000107":null},"secondary_identifiers":["NIF_Subcellular:sao499555322","Wikipedia:Peroxisome","GO:0019818"],"synonyms":[{"name":"peroxisomal","type":"related"},{"name":"peroxisome vesicle","type":"broad"}],"termid":"GO:0005777","terms_by_termid":{"GO:0005777":null,"GO:0005778":null,"GO:0005782":null}}


id: GO:0140999
data:
  {"annotated_genes":["SJAG_00769"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[59050],"is_not":false,"summary":null,"term":"GO:0140999"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl4-[histone H3] + 3 S-adenosyl-L-methionine = 2 H+ + N6,N6-trimethyl-L-lysyl4-[histone H3] + 3 S-adenosyl-L-homocysteine. This reaction is the successive addition of three methyl groups to the unmethylated lysine residue at position 4 of histone H3, producing histone H3K4me3.","definition_xrefs":["PMID:18375658","RHEA:60260"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3K4 methyltransferase activity","termid":"GO:0042800"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00769":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140096","GO:0016741","GO:0003674","GO:0003824","GO:0008276","GO:0016740"],"is_obsolete":false,"name":"histone H3K4 trimethyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["EC:2.1.1.354"],"synonyms":[{"name":"histone H3-K4 trimethylation","type":"broad"},{"name":"histone H3K4 trimethylase activity","type":"exact"},{"name":"histone H3K4 trimethylation","type":"broad"},{"name":"histone lysine N-trimethyltransferase activity (H3-K4 specific)","type":"exact"}],"termid":"GO:0140999","terms_by_termid":{"GO:0140999":null}}


id: MONDO:0012102
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"juvenile open angle glaucoma","termid":"MONDO:0020367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"glaucoma 1, open angle, K","secondary_identifiers":["MEDGEN:324817","MESH:C563873","UMLS:C1837527","GARD:18229","OMIM:608696"],"synonyms":[{"name":"GLC1K","type":"exact"},{"name":"JOAG1K","type":"exact"},{"name":"glaucoma 1, open angle, K","type":"exact"},{"name":"glaucoma 1K, primary open angle, juvenile-onset","type":"exact"},{"name":"glaucoma, primary open angle, juvenile-onset, 3","type":"related"}],"termid":"MONDO:0012102","xrefs":{"Monarch":{"xref_id":"0012102"}}}


id: MONDO:0007273
data:
  {"annotated_genes":["SJAG_00260"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87415],"is_not":false,"summary":null,"term":"MONDO:0007273"}]},"cv_name":"mondo","definition":"Any paraganglioma in which the cause of the disease is a mutation in the SDHB gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paraganglioma","termid":"MONDO:0000448"},{"relation_name":"is_a","term_name":"central nervous system cancer","termid":"MONDO:0002714"},{"relation_name":"is_a","term_name":"adrenal gland cancer","termid":"MONDO:0002817"},{"relation_name":"is_a","term_name":"malignant urinary system neoplasm","termid":"MONDO:0006295"},{"relation_name":"is_a","term_name":"hereditary pheochromocytoma-paraganglioma","termid":"MONDO:0017366"},{"relation_name":"is_a","term_name":"peripheral nervous system cancer","termid":"MONDO:0021089"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00260":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"paragangliomas 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1861848","OMIM:115310","GARD:10546","MEDGEN:349380"],"synonyms":[{"name":"PGL4","type":"related"},{"name":"SDHB paraganglioma","type":"exact"},{"name":"SDHB-related hereditary paraganglioma-pheochromocytoma syndrome","type":"related"},{"name":"carotid body tumors and multiple extraadrenal Pheochromocytomas","type":"related"},{"name":"carotid body tumours and multiple extraadrenal Pheochromocytomas","type":"related"},{"name":"paraganglioma caused by mutation in SDHB","type":"exact"},{"name":"paraganglioma, familial malignant","type":"related"},{"name":"paragangliomas 4","type":"exact"},{"name":"paragangliomas type 4","type":"exact"},{"name":"paragangliomas, hereditary extraadrenal","type":"related"},{"name":"pheochromocytoma, extraadrenal and cervical paraganglioma","type":"related"},{"name":"pheochromocytoma, extraadrenal, and cervical paraganglioma","type":"related"},{"name":"pheochromocytoma, familial extraadrenal","type":"related"}],"termid":"MONDO:0007273","terms_by_termid":{"MONDO:0007273":null},"xrefs":{"Monarch":{"xref_id":"0007273"}}}


id: GO:0009920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which the cell plate is formed at the equator of the spindle in the dividing cells during early telophase. An example of this is found in Arabidopsis thaliana.","definition_xrefs":["GOC:mtg_sensu","ISBN:0879015322","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell plate assembly","termid":"GO:0000919"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"plant-type cell wall biogenesis","termid":"GO:0009832"},{"relation_name":"part_of","term_name":"cytoskeleton-dependent cytokinesis","termid":"GO:0061640"},{"relation_name":"part_of","term_name":"mitotic nuclear division","termid":"GO:0140014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0007049","GO:0071554","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"cell plate formation involved in plant-type cell wall biogenesis","synonyms":[{"name":"cell plate formation involved in cellulose and pectin-containing cell wall biogenesis","type":"exact"}],"termid":"GO:0009920"}


id: PBO:0028281
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_mating-type_region_heterochromatin","termid":"PBO:0028281"}


id: PBO:0087724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the SAGA transcriptional regulatory complex; not present in SAGA-like complex SLIK/SALSA; required for SAGA-mediated inhibition at some promoters","termid":"PBO:0087724"}


id: GO:0035842
data:
  {"annotated_genes":["SJAG_02838"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[112611],"is_not":false,"summary":null,"term":"GO:0035842"}]},"cv_name":"cellular_component","definition":"A cell tip which has existed for at least one complete cell cycle, and at which polarized growth occurs, which is part of a cell that has activated bipolar cell growth (i.e. in which new end take-off, NETO, has taken place). For example, in fission yeast the cell end that existed prior to cell division grows immediately after division, and contains a distinctive complement of proteins including actin cytoskeletal structures.","definition_xrefs":["GOC:expert_jd","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"old growing cell tip","termid":"GO:0035840"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02838":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"old cell tip after activation of bipolar cell growth","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"post-NETO old cell end","type":"exact"},{"name":"post-NETO old cell tip","type":"exact"},{"name":"post-new end take-off old cell tip","type":"exact"}],"termid":"GO:0035842","terms_by_termid":{"GO:0035842":null}}


id: PBO:0054824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2237","termid":"PBO:0054824"}


id: MONDO:0029148
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 34","secondary_identifiers":["GARD:18407","MEDGEN:1648297","OMIM:618153","UMLS:C4748403","DOID:0111911"],"synonyms":[{"name":"SPERMATOGENIC FAILURE 34","type":"related"},{"name":"SPGF34","type":"related"}],"termid":"MONDO:0029148","xrefs":{"Monarch":{"xref_id":"0029148"}}}


id: GO:0006983
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the accumulation of normal or misfolded proteins in the endoplasmic reticulum and leading to activation of transcription by NF-kappaB.","definition_xrefs":["PMID:10390516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ER-nucleus signaling pathway","termid":"GO:0006984"},{"relation_name":"is_a","term_name":"response to endoplasmic reticulum stress","termid":"GO:0034976"},{"relation_name":"is_a","term_name":"cellular response to biotic stimulus","termid":"GO:0071216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"ER overload response","secondary_identifiers":["GO:0006985"],"synonyms":[{"name":"EOR","type":"exact"},{"name":"EOR-mediated NF-kappaB activation","type":"narrow"},{"name":"EOR-mediated activation of NF-kappaB","type":"narrow"},{"name":"ER-overload response","type":"exact"},{"name":"endoplasmic reticulum overload response","type":"exact"},{"name":"positive regulation of NF-kappaB transcription factor activity by EOR","type":"narrow"},{"name":"positive regulation of NF-kappaB transcription factor activity by ER overload response","type":"narrow"}],"termid":"GO:0006983"}


id: GO:0046188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of methane, a colorless, odorless, flammable gas with the formula CH4. It is the simplest of the alkanes.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methane metabolic process","termid":"GO:0015947"},{"relation_name":"is_a","term_name":"alkane catabolic process","termid":"GO:0043448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"methane catabolic process","synonyms":[{"name":"methane breakdown","type":"exact"},{"name":"methane catabolism","type":"exact"},{"name":"methane degradation","type":"exact"}],"termid":"GO:0046188"}


id: GO:0097474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a retinal cone cell, one of the two photoreceptor cell types of the vertebrate retina.","definition_xrefs":["CL:0000573","GOC:jc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron apoptotic process","termid":"GO:0051402"},{"relation_name":"is_a","term_name":"retinal cell apoptotic process","termid":"GO:1990009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retinal cone cell apoptotic process","synonyms":[{"name":"cone photoreceptor apoptotic process","type":"exact"}],"termid":"GO:0097474"}


id: PBO:0072526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 55","termid":"PBO:0072526"}


id: PBO:0055336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2764","termid":"PBO:0055336"}


id: GO:2000426
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of apoptotic cell clearance.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of phagocytosis","termid":"GO:0050765"},{"relation_name":"is_a","term_name":"regulation of apoptotic cell clearance","termid":"GO:2000425"},{"relation_name":"negatively_regulates","term_name":"apoptotic cell clearance","termid":"GO:0043277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"negatively_regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of apoptotic cell clearance","synonyms":[{"name":"negative regulation of apoptotic cell removal","type":"exact"},{"name":"negative regulation of efferocytosis","type":"exact"},{"name":"negative regulation of programmed cell clearance","type":"exact"}],"termid":"GO:2000426"}


id: MONDO:1012705
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinal and skeletal dysplasia that occurs in dogs due to a mutation in the COL9A2 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal and skeletal dysplasia, dog","termid":"MONDO:1012317"},{"relation_name":"is_a","term_name":"dwarfism, non-human animal","termid":"MONDO:1012971"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oculoskeletal dysplasia, COL9A2-related, dog","secondary_identifiers":["OMIA:001523-9615"],"synonyms":[{"name":"oculoskeletal dysplasia 2, dog","type":"related"}],"termid":"MONDO:1012705","xrefs":{"Monarch":{"xref_id":"1012705"}}}


id: GO:0045145
data:
  {"annotated_genes":["SJAG_01648","SJAG_05280"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74388,98942],"is_not":false,"summary":null,"term":"GO:0045145"}]},"cv_name":"molecular_function","definition":"Catalysis of the sequential cleavage of nucleotides (such as mononucleotides or dinucleotides) from a free 5' terminus of a single-stranded DNA molecule.","definition_xrefs":["GOC:ai","GOC:elh","PMID:20086101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single-stranded DNA exodeoxyribonuclease activity","termid":"GO:0008297"},{"relation_name":"is_a","term_name":"5'-3' DNA exonuclease activity","termid":"GO:0035312"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01648":null,"SJAG_05280":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0004527"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0140097","GO:0004527","GO:0016788"],"is_obsolete":false,"name":"single-stranded DNA 5'-3' DNA exonuclease activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:3.1.11.4"],"synonyms":[{"name":"single-stranded DNA specific 5'-3' exodeoxyribonuclease activity","type":"related"},{"name":"ssDNA-specific 5'-3' exodeoxyribonuclease activity","type":"related"}],"termid":"GO:0045145","terms_by_termid":{"GO:0045145":null}}


id: GO:0042481
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the formation and development of a tooth or teeth.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of animal organ morphogenesis","termid":"GO:2000027"},{"relation_name":"regulates","term_name":"odontogenesis","termid":"GO:0042476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of odontogenesis","secondary_identifiers":["GO:0042484"],"synonyms":[{"name":"regulation of odontogenesis of calcareous or chitinous tooth","type":"narrow"},{"name":"regulation of tooth development","type":"exact"}],"termid":"GO:0042481"}


id: MONDO:0800308
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"orotic aciduria","termid":"MONDO:0009797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0019254"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002280","MONDO:0019254","MONDO:0005570"],"is_obsolete":false,"name":"orotic aciduria without megaloblastic anemia","secondary_identifiers":["MEDGEN:480252","UMLS:C3278622"],"synonyms":[{"name":"OAWA","type":"exact"}],"termid":"MONDO:0800308","xrefs":{"Monarch":{"xref_id":"0800308"}}}


id: MONDO:0006680
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An intradermal nevus characterized by the presence of benign pigmented dendritic spindle-shaped melanocytes. It most frequently occurs in the skin of the distal upper extremities, followed by the lower extremities, scalp, face, and buttocks. It usually presents as a single blue or blue-black papular lesion less than 1cm in diameter. Simple excision is usually curative.","definition_xrefs":["NCIT:C3803"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanocytic nevus","termid":"MONDO:0005073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"blue nevus","secondary_identifiers":["UMLS:C0206736","MedDRA:10062788","EFO:1000841","MEDGEN:104930","SCTID:254806009","ICDO:8780/0","MESH:D018329"],"synonyms":[{"name":"Jadassohn-TiC(che nevus","type":"related"},{"name":"Jadassohn-TiC(che syndrome","type":"related"},{"name":"Jadassohn-Tièche nevus","type":"related"},{"name":"Jadassohn-Tièche syndrome","type":"related"},{"name":"Tièche-Jadassohn nevus","type":"related"},{"name":"benign mesenchymal melanoma","type":"related"},{"name":"blue Nevus of skin","type":"exact"},{"name":"blue Nevus of the skin","type":"exact"},{"name":"blue neuronevus","type":"related"},{"name":"blue nevus","type":"exact"},{"name":"blue skin Nevus","type":"exact"}],"termid":"MONDO:0006680","xrefs":{"Monarch":{"xref_id":"0006680"}}}


id: GO:0034429
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body in the optic tectum towards target cells in the premotor reticulospinal system in the hindbrain.","definition_xrefs":["PMID:17507550","PMID:15065115","GOC:dsf","PMID:8038988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system projection neuron axonogenesis","termid":"GO:0021952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tectobulbar tract morphogenesis","termid":"GO:0034429"}


id: GO:0008196
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Receiving vitellogenin, and delivering vitellogenin into the cell via endocytosis.","definition_xrefs":["GOC:bf","PMID:12429745"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cargo receptor activity","termid":"GO:0038024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038024"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038024"],"is_obsolete":false,"name":"vitellogenin receptor activity","termid":"GO:0008196"}


id: GO:0009719
data:
  {"annotated_genes":["SJAG_03048","SJAG_04183","SJAG_00082","SJAG_01805","SJAG_04140","SJAG_04332","SJAG_01837"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113056,104204,91816,95619,118541],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"},{"annotations":[105979],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072429"},{"annotations":[104213],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072441"},{"annotations":[104214],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990820"},{"annotations":[96360,104215],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072435"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus arising within the organism.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stimulus","termid":"GO:0050896"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_04140":null,"SJAG_04183":null,"SJAG_04332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to endogenous stimulus","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0009719","terms_by_termid":{"GO:0072429":null,"GO:0072435":null,"GO:0072441":null,"GO:0140429":null,"GO:1990820":null}}


id: GO:0007493
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell fate determination process in which a cell becomes capable of differentiating autonomously into an endoderm cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["ISBN:0878932437","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate determination","termid":"GO:0001709"},{"relation_name":"part_of","term_name":"endodermal cell fate commitment","termid":"GO:0001711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endodermal cell fate determination","synonyms":[{"name":"endoderm cell fate determination","type":"exact"}],"termid":"GO:0007493"}


id: GO:0032361
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pyridoxal phosphate, pyridoxal phosphorylated at the hydroxymethyl group of C-5, the active form of vitamin B6.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin B6 catabolic process","termid":"GO:0042820"},{"relation_name":"is_a","term_name":"pyridoxal phosphate metabolic process","termid":"GO:0042822"},{"relation_name":"is_a","term_name":"aldehyde catabolic process","termid":"GO:0046185"},{"relation_name":"is_a","term_name":"organophosphate catabolic process","termid":"GO:0046434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0008150","GO:0006766","GO:0044281"],"is_obsolete":false,"name":"pyridoxal phosphate catabolic process","termid":"GO:0032361"}


id: GO:2001111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lens epithelial cell proliferation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell proliferation","termid":"GO:0050679"},{"relation_name":"is_a","term_name":"regulation of lens epithelial cell proliferation","termid":"GO:2001109"},{"relation_name":"positively_regulates","term_name":"lens epithelial cell proliferation","termid":"GO:0097166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lens epithelial cell proliferation","termid":"GO:2001111"}


id: PBO:0066326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger and CCCH-type domains 2","termid":"PBO:0066326"}


id: PBO:0066991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 294","termid":"PBO:0066991"}


id: GO:0019901
data:
  {"annotated_genes":["SJAG_06592","SJAG_01245"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70238],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043424"},{"annotations":[72714],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034236"}]},"cv_name":"molecular_function","definition":"Binding to a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase binding","termid":"GO:0019900"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01245":null,"SJAG_06592":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"protein kinase binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"termid":"GO:0019901","terms_by_termid":{"GO:0034236":null,"GO:0043424":null}}


id: MOD:00791
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamine residue to L-glutamic acid with one (18)O.","definition_xrefs":["PubMed:8382902","Unimod:366#Q"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deamidated L-glutamine","termid":"MOD:00685"},{"relation_name":"is_a","term_name":"1x(18)O labeled deamidated residue","termid":"MOD:00852"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1x(18)O labeled deamidated L-glutamine","synonyms":[{"name":"Deamidated:18O(1)","type":"related"},{"name":"Deamidation in presence of O18","type":"related"}],"termid":"MOD:00791"}


id: MONDO:0056806
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma that arises from the lung. It is characterized by the presence of large malignant cells. It includes the clear cell and papillary variants of squamous cell carcinoma.","definition_xrefs":["NCIT:C133254"],"direct_ancestors":[{"relation_name":"is_a","term_name":"squamous cell lung carcinoma","termid":"MONDO:0005097"},{"relation_name":"is_a","term_name":"non-small cell lung carcinoma","termid":"MONDO:0005233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"non-small cell squamous lung carcinoma","secondary_identifiers":["DOID:0080521","MEDGEN:1383559","UMLS:C4509816","SCTID:723301009"],"synonyms":[{"name":"non-small cell squamous lung cancer","type":"exact"},{"name":"non-small cell squamous lung carcinoma","type":"exact"},{"name":"squamous non-small cell lung carcinoma","type":"exact"}],"termid":"MONDO:0056806","xrefs":{"Monarch":{"xref_id":"0056806"}}}


id: MOD:00916
data:
  {"annotated_genes":["SJAG_04972","SJAG_02763","SJAG_03012","SJAG_02592"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[121252,82326,121390,82327,121388,121253,121389,121391],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00046"},{"annotations":[82525],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00159"}]},"cv_name":"PSI-MOD","definition":"A protein modification that modifies an L-serine residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02592":null,"SJAG_02763":null,"SJAG_03012":null,"SJAG_04972":null},"genotype_count":0,"is_obsolete":false,"name":"modified L-serine residue","references_by_uniquename":{"PMID:26774782":null,"PMID:31150379":null,"PMID:36408920":null},"synonyms":[{"name":"ModSer","type":"exact"}],"termid":"MOD:00916","terms_by_termid":{"GO:0034599":null,"GO:0034605":null,"GO:0071475":null,"GO:1904547":null,"MOD:00046":null,"MOD:00159":null}}


id: GO:0062038
data:
  {"annotated_genes":["SJAG_01978","SJAG_03453","SJAG_00845","SJAG_02486","SJAG_00781"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89957,92660,105523,116484,117452],"is_not":false,"summary":null,"term":"GO:0062038"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of a pheromone response MAPK cascade.","definition_xrefs":["PMID:9315645"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of MAPK cascade","termid":"GO:0043410"},{"relation_name":"is_a","term_name":"regulation of pheromone response MAPK cascade","termid":"GO:0180039"},{"relation_name":"positively_regulates","term_name":"pheromone response MAPK cascade","termid":"GO:0071507"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00781":null,"SJAG_00845":null,"SJAG_01978":null,"SJAG_02486":null,"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of pheromone response MAPK cascade","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0062038","terms_by_termid":{"GO:0062038":null}}


id: PBO:0086662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified based on comparisons of the genome sequences of six Saccharomyces species; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum","termid":"PBO:0086662"}


id: GO:0099115
data:
  {"annotated_genes":["SJAG_00934","SJAG_03945","SJAG_03042","SJAG_03844","SJAG_03982","SJAG_01067","SJAG_04508","SJAG_03942","SJAG_02621","SJAG_05372","SJAG_01745","SJAG_04623","SJAG_03680","SJAG_03685","SJAG_00302","SJAG_01046","SJAG_00756","SJAG_00335","SJAG_01873","SJAG_04186","SJAG_03449","SJAG_04039","SJAG_01332","SJAG_03664","SJAG_01075","SJAG_03789","SJAG_03356","SJAG_02778","SJAG_02401","SJAG_03418","SJAG_03916","SJAG_04142","SJAG_01601","SJAG_02119","SJAG_01579","SJAG_01540","SJAG_03543","SJAG_04574","SJAG_00678","SJAG_03997"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[61533,62357,89677,90884,91168,91857,93144,108130,109991,113066,116138,116277,118717,120432],"is_not":false,"summary":null,"term":"GO:0099115"},{"annotations":[64633,95642,92733,93888,61306,97976,93083,115844,114064,115148,117802,98542,118988,119560,100930,120696,119960,119616,113960,114466,114467,106008,101377,105909,112333,95888],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140720"}]},"cv_name":"cellular_component","definition":"A region of the chromosome, adjacent to the telomere (on the centromeric side) that contains repetitive DNA and sometimes genes. This region is usually heterochromatin.","definition_xrefs":["PMID:18761674","GOC:mah","PMID:22771823","PMID:26205977","PMID:7660126"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome, telomeric region","termid":"GO:0000781"}],"gene_count":40,"genes_by_uniquename":{"SJAG_00302":null,"SJAG_00335":null,"SJAG_00678":null,"SJAG_00756":null,"SJAG_00934":null,"SJAG_01046":null,"SJAG_01067":null,"SJAG_01075":null,"SJAG_01332":null,"SJAG_01540":null,"SJAG_01579":null,"SJAG_01601":null,"SJAG_01745":null,"SJAG_01873":null,"SJAG_02119":null,"SJAG_02401":null,"SJAG_02621":null,"SJAG_02778":null,"SJAG_03042":null,"SJAG_03356":null,"SJAG_03418":null,"SJAG_03449":null,"SJAG_03543":null,"SJAG_03664":null,"SJAG_03680":null,"SJAG_03685":null,"SJAG_03789":null,"SJAG_03844":null,"SJAG_03916":null,"SJAG_03942":null,"SJAG_03945":null,"SJAG_03982":null,"SJAG_03997":null,"SJAG_04039":null,"SJAG_04142":null,"SJAG_04186":null,"SJAG_04508":null,"SJAG_04574":null,"SJAG_04623":null,"SJAG_05372":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005694","GO:0005575"],"is_obsolete":false,"name":"chromosome, subtelomeric region","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:1990707","GO:1990421","SO:0001997"],"synonyms":[{"name":"nuclear subtelomeric heterochromatin","type":"narrow"},{"name":"sub-telomeric heterochromatin","type":"related"},{"name":"subtelomere","type":"exact"},{"name":"subtelomeric heterochromatin","type":"related"}],"termid":"GO:0099115","terms_by_termid":{"GO:0099115":null,"GO:0140720":null}}


id: MONDO:0010879
data:
  {"annotated_genes":["SJAG_00984"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88814],"is_not":false,"summary":null,"term":"MONDO:0010879"}]},"cv_name":"mondo","definition":"Codas syndrome is a multiple congenital anomalies syndrome characterized by Cerebral, Ocular, Dental, Auricular and Skeletal anomalies.","definition_xrefs":["Orphanet:1458"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00984":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"CODAS syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1838180","MESH:C536434","SCTID:717772000","DOID:0111274","GARD:1418","NCIT:C126744","MEDGEN:333031","OMIM:600373"],"synonyms":[{"name":"CODAS syndrome","type":"exact"},{"name":"cerebral, ocular, dental, auricular, and skeletal anomalies syndrome","type":"related"},{"name":"cerebral, ocular, dental, auricular, and skeletal syndrome","type":"related"},{"name":"cerebro-oculo-dento-auriculo-skeletal syndrome","type":"related"},{"name":"cerebrooculodentoauriculoskeletal syndrome","type":"exact"}],"termid":"MONDO:0010879","terms_by_termid":{"MONDO:0010879":null},"xrefs":{"Monarch":{"xref_id":"0010879"}}}


id: PBO:0109642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 66 member 1 like (pseudogene)","termid":"PBO:0109642"}


id: PBO:0059008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monocyte to macrophage differentiation associated 2","termid":"PBO:0059008"}


id: PBO:0077958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 13-2","termid":"PBO:0077958"}


id: MONDO:0015158
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"periodic fever syndrome","termid":"MONDO:0015137"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unexplained periodic fever syndrome","secondary_identifiers":["GARD:19831","Orphanet:102237","UMLS:C5681779","MEDGEN:1842497"],"termid":"MONDO:0015158","xrefs":{"Monarch":{"xref_id":"0015158"}}}


id: PBO:0040060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein 2/3 complex subunit 5","termid":"PBO:0040060"}


id: GO:0018402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Chondroitin sulfate components are covalently linked to a core glycoprotein via O-glycosidic linkages between xylose and serine residues.","definition_xrefs":["RESID:AA0208"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-chondroitin sulfate linkage via chondroitin sulfate D-glucuronyl-D-galactosyl-D-galactosyl-D-xylosyl-L-serine (obsolete GO:0018402)","synonyms":[{"name":"protein-chondroitin sulphate linkage via chondroitin sulphate D-glucuronyl-D-galactosyl-D-galactosyl-D-xylosyl-L-serine","type":"exact"}],"termid":"GO:0018402"}


id: GO:0047519
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (-)-quinate + pyrroloquinoline-quinone = (-)-3-dehydroquinate + pyrroloquinoline-quinol.","definition_xrefs":["RHEA:23672"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor","termid":"GO:0016901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"quinate dehydrogenase (quinone) activity","secondary_identifiers":["EC:1.1.5.8","KEGG_REACTION:R01873","MetaCyc:1.1.99.25-RXN"],"synonyms":[{"name":"NAD(P)-independent quinate dehydrogenase activity","type":"related"},{"name":"quinate:pyrroloquinoline-quinone 5-oxidoreductase activity","type":"related"},{"name":"quinate:quinone 3-oxidoreductase activity","type":"exact"}],"termid":"GO:0047519"}


id: GO:0060496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from a mesenchymal cell to an epithelial cell and contributes to the development of the lung.","definition_xrefs":["GOC:dph","GOC:mtg_lung"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling involved in lung development","termid":"GO:0060495"},{"relation_name":"is_a","term_name":"mesenchymal-epithelial cell signaling","termid":"GO:0060638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"mesenchymal-epithelial cell signaling involved in lung development","synonyms":[{"name":"mesenchymal-epithelial cell signalling involved in lung development","type":"exact"}],"termid":"GO:0060496"}


id: PBO:0088437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dubious, no evidence for translation on annotated strand","termid":"PBO:0088437"}


id: PBO:0077840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"two pore segment channel 2","termid":"PBO:0077840"}


id: MOD:01990
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to a glycinium (protonated glycine).","definition_xrefs":["ChEBI:64723","PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"},{"relation_name":"is_a","term_name":"alpha-amino protonated residue","termid":"MOD:01700"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protonated glycine (glycinium) residue","termid":"MOD:01990"}


id: PBO:0051437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-21","termid":"PBO:0051437"}


id: PBO:0040902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMS1P4-AGAP5 readthrough","termid":"PBO:0040902"}


id: GO:0009446
data:
  {"annotated_genes":["SJAG_00043"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77490],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033387"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of putrescine, 1,4-diaminobutane; putrescine can be synthesized from arginine or ornithine and is the metabolic precursor of spermidine and spermine.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine biosynthetic process","termid":"GO:0006596"},{"relation_name":"is_a","term_name":"putrescine metabolic process","termid":"GO:0009445"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00043":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"putrescine biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"putrescine anabolism","type":"exact"},{"name":"putrescine biosynthesis","type":"exact"},{"name":"putrescine formation","type":"exact"},{"name":"putrescine synthesis","type":"exact"}],"termid":"GO:0009446","terms_by_termid":{"GO:0033387":null}}


id: GO:0036350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The non-sexual aggregation of single-celled organisms mediated by the binding of cell wall proteins on one cell to mannose residues on the other.","definition_xrefs":["PMID:9851992","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flocculation","termid":"GO:0000128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"mannose-specific flocculation","secondary_identifiers":["GO:0098612"],"synonyms":[{"name":"cell-cell adhesion involved in mannose-specific flocculation","type":"exact"}],"termid":"GO:0036350"}


id: PBO:0080982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 17","termid":"PBO:0080982"}


id: PBO:0078929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon CCG) 1-1","termid":"PBO:0078929"}


id: PBO:0119670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein regulatory complex subunit 9","termid":"PBO:0119670"}


id: GO:0003714
data:
  {"annotated_genes":["SJAG_04381","SJAG_02846","SJAG_02329","SJAG_00441","SJAG_01804","SJAG_04389","SJAG_00290","SJAG_03845","SJAG_00861","SJAG_03627","SJAG_04921","SJAG_04607","SJAG_01926","SJAG_04396","SJAG_03527","SJAG_01157","SJAG_04186","SJAG_02385"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71837,74963,75412,77082,79093,80889,93070,95018,95056,99030,100703,105780,106083,106143,108568,108838,111195,113948],"is_not":false,"summary":null,"term":"GO:0003714"}]},"cv_name":"molecular_function","definition":"A transcription coregulator activity that represses or decreases the transcription of specific gene sets via binding to a DNA-binding transcription factor at a specific genomic locus, either on its own or as part of a complex. Corepressors often act by altering chromatin structure and modifications. For example, one class of transcription corepressors modifies chromatin structure through covalent modification of histones. A second class remodels the conformation of chromatin in an ATP-dependent fashion. A third class modulates interactions of DNA-bound DNA-binding transcription factors with other transcription coregulators.","definition_xrefs":["PMID:10213677","GOC:txnOH-2018","PMID:16858867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription coregulator activity","termid":"GO:0003712"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00290":null,"SJAG_00441":null,"SJAG_00861":null,"SJAG_01157":null,"SJAG_01804":null,"SJAG_01926":null,"SJAG_02329":null,"SJAG_02385":null,"SJAG_02846":null,"SJAG_03527":null,"SJAG_03627":null,"SJAG_03845":null,"SJAG_04186":null,"SJAG_04381":null,"SJAG_04389":null,"SJAG_04396":null,"SJAG_04607":null,"SJAG_04921":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0140110"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003712"}],"interesting_parent_ids":["GO:0030674","GO:0140110","GO:0060090","GO:0003674","GO:0003712"],"is_obsolete":false,"name":"transcription corepressor activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0001106"],"synonyms":[{"name":"RNA polymerase II transcription co-repressor activity","type":"related"},{"name":"RNA polymerase II transcription corepressor activity","type":"related"},{"name":"transcription co-repressor activity","type":"exact"}],"termid":"GO:0003714","terms_by_termid":{"GO:0003714":null}}


id: PBO:0083328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps ORFs SPT5/YML010W and YML009W-B","termid":"PBO:0083328"}


id: MONDO:0007085
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alopecia-epilepsy-pyorrhea-intellectual disability syndrome is characterized by congenital permanent alopecia universalis, intellectual disability, psychomotor epilepsy and periodontitis (pyorrhea). Total permanent alopecia and pyorrhea are invariably concomitant while intellectual disability and psychomotor epilepsy are observed in most patients. No other abnormality of nails or skin (apart from absence of hair) has been reported. Transmission is autosomal dominant.","definition_xrefs":["Orphanet:1008"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"integumentary system disorder","termid":"MONDO:0002051"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alopecia-epilepsy-pyorrhea-intellectual disability syndrome","secondary_identifiers":["MESH:C537057","MEDGEN:350833","OMIM:104130","SCTID:720980004","UMLS:C1863090","GARD:607"],"synonyms":[{"name":"Shokeir syndrome","type":"exact"},{"name":"alopecia, epilepsy, pyorrhea, mental subnormality","type":"related"},{"name":"alopecia, psychomotor epilepsy, pyorrhea, and mental subnormality","type":"related"},{"name":"congenital universal alopecia, epilepsy, mental subnormality and pyorrhea","type":"related"}],"termid":"MONDO:0007085","xrefs":{"Monarch":{"xref_id":"0007085"}}}


id: PBO:0041945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromobox 5 pseudogene 1","termid":"PBO:0041945"}


id: GO:0022628
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The large subunit of a ribosome contained within a chloroplast.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid large ribosomal subunit","termid":"GO:0000311"},{"relation_name":"part_of","term_name":"chloroplast ribosome","termid":"GO:0043253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"chloroplast large ribosomal subunit","synonyms":[{"name":"chloroplast ribosomal LSU complex","type":"exact"},{"name":"chloroplast ribosomal large subunit complex","type":"exact"}],"termid":"GO:0022628"}


id: PBO:0077687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF superfamily member 18","termid":"PBO:0077687"}


id: FYPO:0003572
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 in heterochromatin at subtelomeric regions occurs to a lower extent than normal.","definition_xrefs":["PMID:18761674","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K9 methylation during vegetative growth","termid":"FYPO:0000872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0002494","FYPO:0001985","FYPO:0002274","FYPO:0001320"],"is_obsolete":false,"name":"decreased histone H3-K9 methylation at subtelomeric heterochromatin during vegetative growth","synonyms":[{"name":"decreased histone H3 K9 methylation at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 methylation at subtelomeres during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 methylation at subtelomeric heterochromatin during mitotic cell cycle","type":"related"},{"name":"decreased histone H3-K9 methylation at telomeric heterochromatin during vegetative growth","type":"related"},{"name":"decreased histone H3K9me at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K9 methylation at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 methylation at subtelomeric heterochromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0003572"}


id: PBO:0074880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 59B","termid":"PBO:0074880"}


id: PBO:0001515
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ipc Mannosyl-Transferase homologue","termid":"PBO:0001515"}


id: PBO:0017852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino acid transmembrane transporter (predicted)","termid":"PBO:0017852"}


id: PBO:0061036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIP7 pseudogene 2","termid":"PBO:0061036"}


id: PATO:0001316
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A temperature which is increased by a medium degree.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased temperature","termid":"PATO:0001305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"moderate increased temperature","termid":"PATO:0001316"}


id: PBO:0066666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RIPOR family member 3","termid":"PBO:0066666"}


id: PBO:0065256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 22","termid":"PBO:0065256"}


id: GO:0180001
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a cyclic di-AMP nucleotide.","definition_xrefs":["PMID:32843560","PMID:36629470"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclic nucleotide binding","termid":"GO:0030551"},{"relation_name":"is_a","term_name":"adenyl ribonucleotide binding","termid":"GO:0032559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"cyclic-di-AMP binding","synonyms":[{"name":"cyclic dimeric adenosine monophosphate binding","type":"exact"}],"termid":"GO:0180001"}


id: GO:0072469
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of events in which information about cell size is received and converted into a molecular signal, contributing to a cell size control checkpoint.","definition_xrefs":["GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete detection of stimulus involved in cell size control checkpoint (obsolete GO:0072469)","synonyms":[{"name":"cell size control checkpoint sensor mechanism","type":"related"},{"name":"cell size control checkpoint sensor process","type":"related"},{"name":"detection of stimulus involved in mitotic cell cycle cell size control checkpoint","type":"exact"},{"name":"sensing involved in cell size control checkpoint","type":"related"}],"termid":"GO:0072469"}


id: PBO:0062981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudoautosomal boundary region, X-linked","termid":"PBO:0062981"}


id: PBO:0056796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multifunctional ROCO family signaling regulator 1","termid":"PBO:0056796"}


id: MONDO:0004441
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An embryonal carcinoma that arises from the ovary and occurs in children.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian embryonal carcinoma","termid":"MONDO:0003581"},{"relation_name":"is_a","term_name":"pediatric ovarian germ cell tumor","termid":"MONDO:0003760"},{"relation_name":"is_a","term_name":"malignant childhood germ cell neoplasm","termid":"MONDO:0004479"},{"relation_name":"is_a","term_name":"childhood gonadal germ cell tumor","termid":"MONDO:0020577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"childhood ovarian embryonal carcinoma","secondary_identifiers":["DOID:8036","NCIT:C6546","UMLS:C1332989","MEDGEN:232352"],"synonyms":[{"name":"childhood embryonal carcinoma of ovary","type":"exact"},{"name":"childhood embryonal carcinoma of the ovary","type":"related"},{"name":"ovarian embryonal carcinoma of childhood","type":"exact"},{"name":"paediatric embryonal carcinoma of ovary","type":"exact"},{"name":"paediatric embryonal carcinoma of the ovary","type":"exact"},{"name":"paediatric ovarian embryonal carcinoma","type":"exact"},{"name":"pediatric embryonal carcinoma of ovary","type":"exact"},{"name":"pediatric embryonal carcinoma of the ovary","type":"exact"},{"name":"pediatric ovarian embryonal carcinoma","type":"exact"}],"termid":"MONDO:0004441","xrefs":{"Monarch":{"xref_id":"0004441"}}}


id: MOD:00710
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively adds a proton and replaces two hydrogen atoms with two methyl groups.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dimethylated residue","termid":"MOD:00429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"protonated-dimethylated residue","synonyms":[{"name":"Me2+Res","type":"exact"}],"termid":"MOD:00710"}


id: RO:HOM0000054
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Orthology that involves functional equivalent genes with retention of the ancestral function.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_orthology_relationship_with","termid":"RO:HOM0000017"},{"relation_name":"is_a","term_name":"in_equivalogy_relationship_with","termid":"RO:HOM0000062"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_isoorthology_relationship_with","synonyms":[{"name":"isoorthologous to","type":"exact"}],"termid":"RO:HOM0000054"}


id: PR:O13963
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A diphosphomevalonate decarboxylase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01270","PANTHER:PTHR10977:SF2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphosphomevalonate decarboxylase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24C9.03","secondary_identifiers":["UniProtKB:O13963"],"synonyms":[{"name":"MDDase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-MVD","type":"exact"},{"name":"mevalonate pyrophosphate decarboxylase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mevalonate-5-diphosphate decarboxylase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13963"}


id: GO:0061442
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process involved in cardiac muscle cell fate commitment. Once determination has taken place, a cell becomes committed to differentiate down a particular pathway regardless of its environment.","definition_xrefs":["GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle cell fate determination","termid":"GO:0007521"},{"relation_name":"is_a","term_name":"cardiac cell fate determination","termid":"GO:0060913"},{"relation_name":"part_of","term_name":"cardiac muscle cell fate commitment","termid":"GO:0060923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac muscle cell fate determination","termid":"GO:0061442"}


id: GO:0005572
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA polymerase II transcribed untranslated RNA (obsolete GO:0005572)","synonyms":[{"name":"RNA polymerase II transcribed untranslated RNA","type":"exact"}],"termid":"GO:0005572"}


id: PBO:0073771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 4 member 4","termid":"PBO:0073771"}


id: PBO:0113252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Palmitoylated vacuolar membrane-localized casein kinase I isoform; negatively regulates vacuole fusion during hypertonic stress via phosphorylation of Vps41p; shares essential functions with Hrr25p; targeted to vacuole via AP-3 pathway; regulates vesicle fusion in AP-3 pathway","termid":"PBO:0113252"}


id: PBO:0026702
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_tyrosine_level","termid":"PBO:0026702"}


id: PBO:0056963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 23a","termid":"PBO:0056963"}


id: MONDO:1012194
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"occipital dysplasia, non-human animal","termid":"MONDO:1011949"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"occipital dysplasia, dog","secondary_identifiers":["OMIA:000732-9615"],"termid":"MONDO:1012194","xrefs":{"Monarch":{"xref_id":"1012194"}}}


id: FYPO:0007097
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which actin fusion focus assembly takes place in one or more abnormal locations. An actin fusion focus normally forms during mating at the site where the two cells will fuse. Ectopic fusion foci often form near actin cortical patches, and may also have abnormal composition.","definition_xrefs":["PomBase:mah","PMID:31495586"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin fusion focus assembly","termid":"FYPO:0006108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0004803","FYPO:0000301","FYPO:0005447"],"is_obsolete":false,"name":"ectopic actin fusion focus assembly","synonyms":[{"name":"ectopic actin fusion focus formation","type":"exact"},{"name":"mislocalized actin fusion focus assembly","type":"exact"}],"termid":"FYPO:0007097"}


id: GO:0016760
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + ((1,4)-beta-D-glucosyl)(n) = UDP + ((1,4)-beta-D-glucosyl)(n+1).","definition_xrefs":["EC:2.4.1.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellulose synthase activity","termid":"GO:0016759"},{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"cellulose synthase (UDP-forming) activity","secondary_identifiers":["MetaCyc:CELLULOSE-SYNTHASE-UDP-FORMING-RXN","RHEA:19929"],"synonyms":[{"name":"1,4-beta-D-glucan synthase activity","type":"related"},{"name":"1,4-beta-glucan synthase activity","type":"related"},{"name":"GS-I","type":"related"},{"name":"UDP-glucose-1,4-beta-glucan glucosyltransferase activity","type":"related"},{"name":"UDP-glucose-beta-D-glucan glucosyltransferase activity","type":"related"},{"name":"UDP-glucose-cellulose glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:1,4-beta-D-glucan 4-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose-beta-glucan glucosyltransferase activity","type":"related"},{"name":"UDPglucose-cellulose glucosyltransferase activity","type":"related"},{"name":"UDPglucose:1,4-beta-D-glucan 4-beta-D-glucosyltransferase activity","type":"related"},{"name":"beta-1,4-glucan synthase activity","type":"related"},{"name":"beta-1,4-glucan synthetase activity","type":"related"},{"name":"beta-1,4-glucosyltransferase activity","type":"related"},{"name":"beta-glucan synthase activity","type":"related"},{"name":"glucan synthase activity","type":"related"},{"name":"uridine diphosphoglucose-1,4-beta-glucan glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-cellulose glucosyltransferase activity","type":"related"}],"termid":"GO:0016760"}


id: MONDO:0100091
data:
  {"annotated_genes":["SJAG_01344","SJAG_03785","SJAG_05213"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86954,86952,86953],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009925"},{"annotations":[87668,87669,87670],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008333"}]},"cv_name":"mondo","definition":"An inheritable form of pseudoxanthoma elasticum (PXE), that causes calcium and other minerals to accumulate in the elastic fibers of the skin, eyes, and blood vessels, and less frequently in other areas such as the digestive tract. PXE may cause the following symptoms: growth of yellowish bumps on the skin of the neck, under the arms, or in the groin area; reduced vision; periodic weakness in the legs (claudication); or bleeding in the gastrointestinal tract, particularly the stomach. A clinical diagnosis of PXE can be made when an individual is found to have both the characteristic eye findings and yellow bumps on the skin. ABCC6 is the only gene known to be associated with this condition. Currently, there is no treatment for this condition, but affected individuals may benefit from routine visits to an eye doctor who specializes in retinal disorders, and by having regular physical examinationswith their primary physician.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"pseudoxanthoma elasticum (inherited or acquired)","termid":"MONDO:0024308"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01344":null,"SJAG_03785":null,"SJAG_05213":null},"genotype_count":0,"is_obsolete":false,"name":"inherited pseudoxanthoma elasticum","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1274225","GARD:9643","MEDGEN:697574"],"synonyms":[{"name":"inherited Gronblad Strandberg syndrome","type":"exact"},{"name":"inherited PXE","type":"exact"}],"termid":"MONDO:0100091","terms_by_termid":{"MONDO:0008333":null,"MONDO:0009925":null},"xrefs":{"Monarch":{"xref_id":"0100091"}}}


id: GO:0033069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ansamycins, any of a group of complex macrolactam compounds characterized by a cyclic structure in which an aliphatic ansa chain forms a bridge between two non-adjacent positions of a cyclic p-system; many exhibit antibacterial, antifungal or antitumor activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antibiotic metabolic process","termid":"GO:0016999"},{"relation_name":"is_a","term_name":"polyketide metabolic process","termid":"GO:0030638"},{"relation_name":"is_a","term_name":"lactam metabolic process","termid":"GO:0072338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"ansamycin metabolic process","synonyms":[{"name":"ansamycin metabolism","type":"exact"}],"termid":"GO:0033069"}


id: MONDO:0016825
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mitochondrial myopathy-lactic acidosis-deafness is a type of metabolic myopathy described only in two sisters to date, presenting during childhood, and characterized clinically by growth failure, severe muscle weakness, and moderate sensorineural deafness and biochemically by metabolic acidosis, elevated serum pyruvate concentration, hyperalaninemia and hyperalaninuria. There have been no further descriptions in the literature since 1973.","definition_xrefs":["Orphanet:2597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn mitochondrial myopathy","termid":"MONDO:0009637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial myopathy-lactic acidosis-deafness syndrome","secondary_identifiers":["OMIM:251950","GARD:3682","MEDGEN:343245","MESH:C537476","UMLS:C1855033"],"synonyms":[{"name":"MMLA","type":"related"},{"name":"metabolic myopathy associated with chronic lactic acidemia, growth failure, and nerve deafness","type":"related"},{"name":"mitochondrial myopathy with lactic acidosis","type":"exact"},{"name":"mitochondrial myopathy-lactic acidosis-hearing loss syndrome","type":"exact"}],"termid":"MONDO:0016825","xrefs":{"Monarch":{"xref_id":"0016825"}}}


id: PBO:0040540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,3-galactosyltransferase 6","termid":"PBO:0040540"}


id: PBO:0050842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin binding sialoprotein","termid":"PBO:0050842"}


id: GO:0033120
data:
  {"annotated_genes":["SJAG_02018","SJAG_01919","SJAG_01040","SJAG_03279","SJAG_02058","SJAG_00996"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[120293,91291],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905746"},{"annotations":[75764,93974,77066,112779],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048026"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of RNA splicing.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gene expression","termid":"GO:0010628"},{"relation_name":"is_a","term_name":"regulation of RNA splicing","termid":"GO:0043484"},{"relation_name":"positively_regulates","term_name":"RNA splicing","termid":"GO:0008380"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00996":null,"SJAG_01040":null,"SJAG_01919":null,"SJAG_02018":null,"SJAG_02058":null,"SJAG_03279":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of RNA splicing","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0033120","terms_by_termid":{"GO:0048026":null,"GO:1905746":null}}


id: GO:0021697
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the cerebellar cortex. This process pertains to the initial formation of a structure from unspecified parts. The cerebellar cortex is a thin mantle of gray matter that covers the surface of each cerebral hemisphere. It has a characteristic morphology with convolutions (gyri) and crevices (sulci) that have specific functions. Six layers of nerve cells and the nerve pathways that connect them comprise the cerebellar cortex. Together, these regions are responsible for the processes of conscious thought, perception, emotion and memory as well as advanced motor function.","definition_xrefs":["GO_REF:0000021","GOC:jid","GOC:cls","GOC:dph","ISBN:0838580343","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"cerebellar cortex morphogenesis","termid":"GO:0021696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar cortex formation","termid":"GO:0021697"}


id: PBO:0065608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTP4A1 pseudogene 2","termid":"PBO:0065608"}


id: PATO:0001934
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being perfectly circular.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"circular","termid":"PATO:0000411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orbicular","termid":"PATO:0001934"}


id: PR:Q9P3V8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of any of the following genes in Schizosaccharomyces pombe 972h-: SPAC977.01/SPBC1348.02/SPBPB2B2.19c.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P3V8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C977.01/C1348.02/PB2B2.19c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB2B2.19c","synonyms":[{"name":"Spom972h-SPBPB2B2.19c","type":"exact"}],"termid":"PR:Q9P3V8"}


id: GO:0072718
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cisplatin stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cisplatin","termid":"GO:0072718"}


id: MONDO:0018018
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-familial restrictive cardiomyopathy","termid":"MONDO:0016345"},{"relation_name":"is_a","term_name":"amyloidosis","termid":"MONDO:0019065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0021179"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0005066","MONDO:0021179"],"is_obsolete":false,"name":"wild type ATTR amyloidosis","secondary_identifiers":["ICD10CM:E85.82","MEDGEN:87446","UMLS:C0342623","DOID:0080937","NANDO:1200212","ICD9:277.39","Orphanet:330001","GARD:21501","SCTID:237877004"],"synonyms":[{"name":"ATTRwt amyloidosis","type":"exact"},{"name":"ATTRwt-related amyloidosis","type":"exact"},{"name":"SSA","type":"exact"},{"name":"Senile systemic amyloidosis","type":"exact"},{"name":"wild type ATTR-related amyloidosis","type":"exact"}],"termid":"MONDO:0018018","xrefs":{"Monarch":{"xref_id":"0018018"}}}


id: MONDO:0005180
data:
  {"annotated_genes":["SJAG_01317","SJAG_01270","SJAG_03866","SJAG_00063","SJAG_00078","SJAG_01039","SJAG_04545","SJAG_04404","SJAG_01229","SJAG_04757","SJAG_00421","SJAG_02106","SJAG_16459"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87576,87577],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014796"},{"annotations":[87976,87977],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011658"},{"annotations":[87586,87585],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014233"},{"annotations":[88737,88738],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011706"},{"annotations":[89151,89150],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008199"},{"annotations":[89114],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013625"},{"annotations":[88171,88172],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957576"}]},"cv_name":"mondo","definition":"A progressive degenerative disorder of the central nervous system characterized by loss of dopamine producing neurons in the substantia nigra and the presence of Lewy bodies in the substantia nigra and locus coeruleus. Signs and symptoms include tremor which is most pronounced during rest, muscle rigidity, slowing of the voluntary movements, a tendency to fall back, and a mask-like facial expression.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"synucleinopathy","termid":"MONDO:0000510"},{"relation_name":"is_a","term_name":"parkinsonian disorder","termid":"MONDO:0021095"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00063":null,"SJAG_00078":null,"SJAG_00421":null,"SJAG_01039":null,"SJAG_01229":null,"SJAG_01270":null,"SJAG_01317":null,"SJAG_02106":null,"SJAG_03866":null,"SJAG_04404":null,"SJAG_04545":null,"SJAG_04757":null,"SJAG_16459":null},"genotype_count":0,"is_obsolete":false,"name":"Parkinson disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:168600","ICD9:332","DOID:14330","Orphanet:319705","SCTID:49049000","ICD10CM:G20","ICD9:332.0","NANDO:1200010","MESH:D010300","NCIT:C26845","MEDGEN:10590","UMLS:C0030567","icd11.foundation:296066191","birnlex:2098"],"synonyms":[{"name":"PD","type":"exact"},{"name":"Parkinson disease","type":"exact"},{"name":"Parkinson's disease","type":"exact"},{"name":"paralysis agitans","type":"exact"}],"termid":"MONDO:0005180","terms_by_termid":{"MONDO:0008199":null,"MONDO:0011658":null,"MONDO:0011706":null,"MONDO:0013625":null,"MONDO:0014233":null,"MONDO:0014796":null,"MONDO:0957576":null},"xrefs":{"Monarch":{"xref_id":"0005180"}}}


id: MONDO:0011002
data:
  {"annotated_genes":["SJAG_00031"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88285],"is_not":false,"summary":null,"term":"MONDO:0011002"}]},"cv_name":"mondo","definition":"Any hereditary motor and sensory neuropathy type 6 in which the cause of the disease is a mutation in the MFN2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"motor peripheral neuropathy","termid":"MONDO:0002316"},{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease","termid":"MONDO:0015626"},{"relation_name":"is_a","term_name":"hereditary motor and sensory neuropathy type 6","termid":"MONDO:0019551"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00031":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"neuropathy, hereditary motor and sensory, type 6A","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18091","OMIM:601152"],"synonyms":[{"name":"Charcot-Marie-Tooth disease, type 6","type":"broad"},{"name":"Charcot-Marie-Tooth disease, type 6A","type":"exact"},{"name":"HMSN 6A","type":"related"},{"name":"HMSN6A","type":"exact"},{"name":"MFN2 hereditary motor and sensory neuropathy type 6","type":"exact"},{"name":"hereditary motor and sensory neuropathy VIA","type":"exact"},{"name":"hereditary motor and sensory neuropathy type 6 caused by mutation in MFN2","type":"exact"},{"name":"neuropathy, hereditary motor and sensory, type 6","type":"broad"},{"name":"neuropathy, hereditary motor and sensory, type VIA","type":"exact"},{"name":"peripheral neuropathy and optic atrophy","type":"broad"}],"termid":"MONDO:0011002","terms_by_termid":{"MONDO:0011002":null},"xrefs":{"Monarch":{"xref_id":"0011002"}}}


id: FYPO:0005340
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which deacetylation of lysine at position 4 of histone H4 is normal (i.e. indistinguishable from wild type) during a cellular response to hydroxyurea.","definition_xrefs":["PMID:24478943","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone modification during vegetative growth","termid":"FYPO:0002600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal histone H4 deacetylation during cellular response to hydroxyurea","synonyms":[{"name":"normal histone H4 deacetylation during cellular response to HU","type":"exact"},{"name":"normal histone H4 deacetylation during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"normal histone H4 deacetylation during cellular response to hydroxyurea during vegetative growth","type":"exact"}],"termid":"FYPO:0005340"}


id: PATO:0001026
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality which is equal to the energy transferred by a force to a moving object.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Work"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"work","synonyms":[{"name":"W","type":"exact"}],"termid":"PATO:0001026"}


id: GO:0072409
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of events in which information about a biological process or quality is received and converted into a molecular signal, contributing to a meiotic cell cycle checkpoint.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete detection of stimulus involved in meiotic cell cycle checkpoint (obsolete GO:0072409)","synonyms":[{"name":"meiotic cell cycle checkpoint sensor mechanism","type":"related"},{"name":"meiotic cell cycle checkpoint sensor process","type":"related"},{"name":"sensing involved in meiotic cell cycle checkpoint","type":"related"}],"termid":"GO:0072409"}


id: GO:0005703
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A swelling at a site along the length of a polytene chromosome, thought to be the site of active transcription.","definition_xrefs":["GOC:bf","ISBN:0120649012"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal region","termid":"GO:0098687"},{"relation_name":"part_of","term_name":"polytene chromosome","termid":"GO:0005700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005694","GO:0005575"],"is_obsolete":false,"name":"polytene chromosome puff","termid":"GO:0005703"}


id: GO:0070736
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the posttranslational transfer of a glycine residue to the gamma-carboxyl group(s) of one or more specific glutamate residues on a target protein.","definition_xrefs":["GOC:mah","PMID:19524510"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-glycine ligase activity","termid":"GO:0070735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0140096","GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"protein-glycine ligase activity, initiating","synonyms":[{"name":"protein glycylase activity, initiating","type":"exact"}],"termid":"GO:0070736"}


id: PBO:0005852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane associated protein Pal1","termid":"PBO:0005852"}


id: PBO:0073188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenoprotein S","termid":"PBO:0073188"}


id: PBO:0047062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 120B","termid":"PBO:0047062"}


id: PBO:0068505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 94, pseudogene","termid":"PBO:0068505"}


id: PBO:0089525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U5 snRNP complex ATPase subunit Brr2","termid":"PBO:0089525"}


id: GO:0014059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of dopamine.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catecholamine secretion","termid":"GO:0050433"},{"relation_name":"regulates","term_name":"dopamine secretion","termid":"GO:0014046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of dopamine secretion","termid":"GO:0014059"}


id: GO:0016596
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to thienylcyclohexylpiperidine.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"thienylcyclohexylpiperidine binding","synonyms":[{"name":"TCP binding","type":"broad"}],"termid":"GO:0016596"}


id: FYPO:0004728
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cytoplasmic microtubules are formed by the extension of existing nuclear microtubules through a puncture in the nuclear envelope. Normally, cytoplasmic microtubules are nucleated from microtubule organizing centers in the cytoplasm.","definition_xrefs":["PMID:15772152","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic microtubule formation from nuclear microtubules","termid":"FYPO:0004727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000054","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"cytoplasmic microtubule formation from nuclear microtubules following nuclear envelope breakthrough","synonyms":[{"name":"cytoplasmic microtubule formation from nuclear microtubules following nuclear envelope breakthrough during mitotic cell cycle","type":"related"},{"name":"cytoplasmic microtubule formation from nuclear microtubules following nuclear envelope breakthrough during vegetative growth","type":"exact"}],"termid":"FYPO:0004728"}


id: PBO:0082432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRCA1 C-terminal domain protein needed for recovery from DNA damage; implicated in Mms22-dependent DNA repair during S phase; involved in recruiting SMC5/6 complex to double-strand breaks; DNA damage induces phosphorylation by Mec1p at one or more SQ/TQ motifs; interacts with Mms22p and Slx4p; has four BRCT domains; has a role in regulation of Ty1 transposition; relative distribution to nuclear foci increases upon DNA replication stress","termid":"PBO:0082432"}


id: GO:1903522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of blood circulation.","definition_xrefs":["GOC:TermGenie","PMID:10659969","GO_REF:0000058","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of system process","termid":"GO:0044057"},{"relation_name":"regulates","term_name":"blood circulation","termid":"GO:0008015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of blood circulation","synonyms":[{"name":"regulation of hemolymph circulation","type":"related"}],"termid":"GO:1903522"}


id: GO:1990671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining of the lipid bilayer membrane around a vesicle to the lipid bilayer membrane around the Golgi medial cisterna. This can involve anterograde or retrograde transport vesicles.","definition_xrefs":["PMID:16038056","GOC:bhm","PMID:24119662"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion with Golgi apparatus","termid":"GO:0048280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"vesicle fusion with Golgi medial cisterna membrane","termid":"GO:1990671"}


id: GO:0071598
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribonucleoprotein complex that is found in the cytoplasm of axons and dendrites, and transports translationally silenced mRNAs to dendritic synapses, where they are released and translated in response to specific exogenous stimuli.","definition_xrefs":["GOC:go_curators","GOC:mah","PMID:19015237","GOC:BHF","PMID:20368989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic ribonucleoprotein granule","termid":"GO:0036464"},{"relation_name":"part_of","term_name":"neuron projection cytoplasm","termid":"GO:0120111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"neuronal ribonucleoprotein granule","synonyms":[{"name":"neuronal RNA granule","type":"narrow"},{"name":"neuronal RNP granule","type":"exact"}],"termid":"GO:0071598"}


id: PBO:0034653
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_maintenance_of_protein_localization_in_vacuole,_with_protein_secreted","termid":"PBO:0034653"}


id: PBO:0058945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIX23 pseudogene 4","termid":"PBO:0058945"}


id: PATO:0002313
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Having or resembling the shape of a telescope.","definition_xrefs":["PATOC:BF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telescopic","termid":"PATO:0002313"}


id: FYPO:0004324
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 16 of histone H4 in at the centromere central core occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah","PMID:18493607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H4-K16 acetylation during vegetative growth","termid":"FYPO:0007632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002274","FYPO:0002494","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased histone H4-K16 acetylation at centromere central core during vegetative growth","synonyms":[{"name":"increased histone H4-K16 acetylation at centromere central core during mitotic cell cycle","type":"related"},{"name":"increased histone H4K16 acetylation at centromere central core during vegetative growth","type":"exact"}],"termid":"FYPO:0004324"}


id: PBO:0034129
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-ubiquitously_expresses","termid":"PBO:0034129"}


id: PBO:0005141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Psk1","termid":"PBO:0005141"}


id: GO:0021658
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of rhombomere 3 is generated and organized. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:dph","GOC:jid","GOC:curators","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere morphogenesis","termid":"GO:0021593"},{"relation_name":"part_of","term_name":"rhombomere 3 development","termid":"GO:0021569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 3 morphogenesis","termid":"GO:0021658"}


id: MONDO:0004712
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Localized rash characterized by grouped vesicles or pustules on an erythematous base that is caused by herpes simplex virus infection.","definition_xrefs":["NCIT:C35620"],"direct_ancestors":[{"relation_name":"is_a","term_name":"herpes simplex infectious disease","termid":"MONDO:0004609"},{"relation_name":"is_a","term_name":"skin infection","termid":"MONDO:0021201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"herpes simplex dermatitis","secondary_identifiers":["MESH:D007617","SCTID:186535001","UMLS:C0854331","ICD9:054.0","DOID:9123","ICD9:054.41","ICD10CM:B00.0","MEDGEN:163132"],"synonyms":[{"name":"Herpes simplex dermatitis","type":"exact"},{"name":"Herpes simplex dermatitis of eyelid","type":"narrow"},{"name":"Herpes simplex eyelid dermatitis","type":"narrow"},{"name":"Herpes simplex virus dermatitis","type":"exact"},{"name":"Simplexvirus caused dermatitis","type":"exact"},{"name":"Simplexvirus dermatitis","type":"exact"},{"name":"eczema herpeticum","type":"related"},{"name":"eczema herpeticum (disorder) [ambiguous]","type":"exact"},{"name":"herpes simplex dermatitis","type":"exact"},{"name":"herpes simplex virus eyelid dermatitis","type":"narrow"}],"termid":"MONDO:0004712","xrefs":{"Monarch":{"xref_id":"0004712"}}}


id: PBO:0042896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement factor H","termid":"PBO:0042896"}


id: PBO:0068281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease H1 pseudogene 2","termid":"PBO:0068281"}


id: PATO:0001708
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A size quality inhering in an bearer by virtue of the bearer's extension in one dimension.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"size","termid":"PATO:0000117"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-D extent","synonyms":[{"name":"1-D size","type":"exact"}],"termid":"PATO:0001708"}


id: MONDO:0010147
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tongue, pigmented fungiform papillae of","secondary_identifiers":["UMLS:C1848756","OMIM:275250","MEDGEN:336411"],"synonyms":[{"name":"tongue, pigmented fungiform papillae of","type":"exact"}],"termid":"MONDO:0010147","xrefs":{"Monarch":{"xref_id":"0010147"}}}


id: PBO:0000542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AMP binding enzyme (predicted)","termid":"PBO:0000542"}


id: GO:0046182
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-idonate, the anion of idonic acid, an aldonic acid derived from L-idose, an aldohexose which is epimeric with D-glucose.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate biosynthetic process","termid":"GO:0016051"},{"relation_name":"is_a","term_name":"L-idonate metabolic process","termid":"GO:0019523"},{"relation_name":"is_a","term_name":"aldonic acid biosynthetic process","termid":"GO:0046175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"L-idonate biosynthetic process","synonyms":[{"name":"L-idonate anabolism","type":"exact"},{"name":"L-idonate biosynthesis","type":"exact"},{"name":"L-idonate formation","type":"exact"},{"name":"L-idonate synthesis","type":"exact"}],"termid":"GO:0046182"}


id: PR:Q9P7D7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A bifunctional protein aas that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long-chain-fatty-acid--CoA ligase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP4H10.11c","secondary_identifiers":["UniProtKB:Q9P7D7"],"synonyms":[{"name":"SPBP4H10.11c","type":"related"},{"name":"Spom972h-aas","type":"exact"},{"name":"fatty acid activator 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"long-chain acyl-CoA synthetase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7D7"}


id: GO:0045873
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the sevenless signaling pathway.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"negative regulation of cell fate commitment","termid":"GO:0010454"},{"relation_name":"is_a","term_name":"regulation of sevenless signaling pathway","termid":"GO:0045501"},{"relation_name":"is_a","term_name":"negative regulation of R7 cell differentiation","termid":"GO:0045677"},{"relation_name":"negatively_regulates","term_name":"sevenless signaling pathway","termid":"GO:0045500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of sevenless signaling pathway","synonyms":[{"name":"down regulation of sevenless signaling pathway","type":"exact"},{"name":"down-regulation of sevenless signaling pathway","type":"exact"},{"name":"downregulation of sevenless signaling pathway","type":"exact"},{"name":"inhibition of sevenless signaling pathway","type":"narrow"},{"name":"negative regulation of sev signaling pathway","type":"exact"},{"name":"negative regulation of sevenless signalling pathway","type":"exact"}],"termid":"GO:0045873"}


id: PBO:0084147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High-affinity leucine permease; functions as a branched-chain amino acid permease involved in uptake of leucine, isoleucine and valine; contains 12 predicted transmembrane domains; BAP2 has a paralog, BAP3, that arose from the whole genome duplication","termid":"PBO:0084147"}


id: PBO:0085698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in retention of membrane proteins; including Sec12p, in the ER; localized to Golgi; functions as a retrieval receptor in returning membrane proteins to the ER","termid":"PBO:0085698"}


id: GO:0046300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 2,4-dichlorophenoxyacetic acid, a chlorinated phenoxy compound which functions as a systemic herbicide and is used to control many types of broadleaf weeds.","definition_xrefs":["UM-BBD_pathwayID:2,4-d","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2,4-dichlorophenoxyacetic acid metabolic process","termid":"GO:0018901"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"2,4-dichlorophenoxyacetic acid catabolic process","secondary_identifiers":["UM-BBD_pathwayID:2\\,4-d"],"synonyms":[{"name":"2,4-dichlorophenoxyacetic acid breakdown","type":"exact"},{"name":"2,4-dichlorophenoxyacetic acid catabolism","type":"exact"},{"name":"2,4-dichlorophenoxyacetic acid degradation","type":"exact"}],"termid":"GO:0046300"}


id: GO:0048294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of isotype switching to IgE isotypes.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of isotype switching","termid":"GO:0045829"},{"relation_name":"is_a","term_name":"regulation of isotype switching to IgE isotypes","termid":"GO:0048293"},{"relation_name":"negatively_regulates","term_name":"isotype switching to IgE isotypes","termid":"GO:0048289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0006310","GO:0010467","GO:0006259"],"is_obsolete":false,"name":"negative regulation of isotype switching to IgE isotypes","synonyms":[{"name":"down regulation of isotype switching to IgE isotypes","type":"exact"},{"name":"down-regulation of isotype switching to IgE isotypes","type":"exact"},{"name":"downregulation of isotype switching to IgE isotypes","type":"exact"},{"name":"inhibition of isotype switching to IgE isotypes","type":"narrow"},{"name":"negative regulation of class switch recombination to IgE isotypes","type":"exact"},{"name":"negative regulation of class switching to IgE isotypes","type":"exact"},{"name":"negative regulation of isotype switch recombination to IgE isotypes","type":"exact"}],"termid":"GO:0048294"}


id: GO:0006049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of UDP-N-acetylglucosamine, a substance composed of N-acetylglucosamine, a common structural unit of oligosaccharides, in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-N-acetylglucosamine metabolic process","termid":"GO:0006047"},{"relation_name":"is_a","term_name":"nucleotide-sugar catabolic process","termid":"GO:0009227"},{"relation_name":"is_a","term_name":"amino sugar catabolic process","termid":"GO:0046348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"UDP-N-acetylglucosamine catabolic process","synonyms":[{"name":"UDP-N-acetylglucosamine breakdown","type":"exact"},{"name":"UDP-N-acetylglucosamine catabolism","type":"exact"},{"name":"UDP-N-acetylglucosamine degradation","type":"exact"}],"termid":"GO:0006049"}


id: GO:2000324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of nuclear receptor-mediated glucocorticoid signaling pathway.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intracellular steroid hormone receptor signaling pathway","termid":"GO:0033145"},{"relation_name":"is_a","term_name":"regulation of nuclear receptor-mediated glucocorticoid signaling pathway","termid":"GO:2000322"},{"relation_name":"positively_regulates","term_name":"nuclear receptor-mediated glucocorticoid signaling pathway","termid":"GO:0042921"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of nuclear receptor-mediated glucocorticoid signaling pathway","synonyms":[{"name":"positive regulation of glucocorticoid receptor signaling pathway","type":"exact"},{"name":"positive regulation of glucocorticoid receptor signalling pathway","type":"exact"}],"termid":"GO:2000324"}


id: PR:O59678
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribosome biogenesis regulatory protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR17602:SF4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis regulatory protein homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A3.16","secondary_identifiers":["UniProtKB:O59678"],"synonyms":[{"name":"Spom972h-RRS1","type":"exact"}],"termid":"PR:O59678"}


id: PBO:0076935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trefoil factor 3","termid":"PBO:0076935"}


id: PBO:0083353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the verified gene JJJ1/YNL227C","termid":"PBO:0083353"}


id: MOD:00230
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts two L-cysteine residues, two L-histidine residues and a two-iron two-sulfur cluster to bis-L-cysteinyl bis-L-histidino diiron disulfide.","definition_xrefs":["PubMed:9651245","PubMed:2765515","RESID:AA0225"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-histidine residue","termid":"MOD:02070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"bis-L-cysteinyl bis-L-histidino diiron disulfide","synonyms":[{"name":"METAL Iron-sulfur (2Fe-2S)","type":"exact"},{"name":"METAL Iron-sulfur (2Fe-2S); via pros nitrogen","type":"exact"},{"name":"Rieske iron-sulfur cofactor","type":"exact"},{"name":"bis-L-cysteinyl bis-L-histidino diiron disulfide","type":"exact"},{"name":"di-mu-sulfido(bis-S-cysteinyliron)(bis-N3'-histidinoiron)","type":"exact"}],"termid":"MOD:00230"}


id: PBO:0085105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear protein with role in transcription, protein quality control; localizes to the intranuclear quality control compartment (INQ) in response to proteasome inhibition or DNA replication stress; INQ likely sequesters proteins involved in DNA metabolism for degradation or re-folding; also localizes to coding regions of transcribed genes; contains three WD domains (WD-40 repeat); human ortholog WDR76 also exhibits perinuclear localization under similar stress conditions","termid":"PBO:0085105"}


id: PATO:0001294
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A scalar EM radiation quality which obtains by the capacity of the bearer to scatter or reflect radiation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"full-spectrum EM radiation quality","termid":"PATO:0001292"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radiation reflective quality","termid":"PATO:0001294"}


id: MONDO:1011689
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hematologic disorder, non-human animal","termid":"MONDO:1011319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemolytic anemia, non-human animal","secondary_identifiers":["OMIA:000430"],"termid":"MONDO:1011689","xrefs":{"Monarch":{"xref_id":"1011689"}}}


id: GO:0042564
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A dimer consisting of an alpha and a beta-subunit that imports proteins with an NLS into the nucleus through a nuclear pore.","definition_xrefs":["PMID:9323123","GOC:jl","PMID:9323134","Wikipedia:Importin"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleocytoplasmic transport complex","termid":"GO:0031074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"NLS-dependent protein nuclear import complex","termid":"GO:0042564"}


id: PBO:0055242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2669","termid":"PBO:0055242"}


id: PBO:0080726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WT1 interacting protein","termid":"PBO:0080726"}


id: PBO:0040479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ataxin 2","termid":"PBO:0040479"}


id: GO:0047661
data:
  {"annotated_genes":["SJAG_04298","SJAG_00036"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[62977,66974],"is_not":false,"summary":null,"term":"GO:0047661"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: an L-amino acid = a D-amino acid.","definition_xrefs":["EC:5.1.1.10","MetaCyc:AMINO-ACID-RACEMASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on amino acids and derivatives","termid":"GO:0016855"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00036":null,"SJAG_04298":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"amino-acid racemase activity","references_by_uniquename":{"GO_REF:0000002":null},"secondary_identifiers":["RHEA:18317"],"synonyms":[{"name":"L-amino acid racemase activity","type":"related"}],"termid":"GO:0047661","terms_by_termid":{"GO:0047661":null}}


id: PBO:0086034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function, essential for stationary phase survival; not required for growth on nonfermentable carbon sources; possibly linked with vacuolar transport","termid":"PBO:0086034"}


id: PBO:0075505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated serine rich 2 like","termid":"PBO:0075505"}


id: PBO:0075717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serglycin pseudogene 1","termid":"PBO:0075717"}


id: PBO:0074079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC25A51 pseudogene 3","termid":"PBO:0074079"}


id: GO:0004951
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with cholecystokinin and transmitting the signal across the membrane by activating an associated G-protein to initiate a change in cell activity. Cholecystokinin can act as a neuropeptide or as a gastrointestinal hormone.","definition_xrefs":["GOC:signaling","PMID:9835394"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled peptide receptor activity","termid":"GO:0008528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"cholecystokinin receptor activity","synonyms":[{"name":"CCK receptor activity","type":"exact"}],"termid":"GO:0004951"}


id: PBO:0005854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-coA-sterol acyltransferase Are2 (predicted)","termid":"PBO:0005854"}


id: MONDO:0001972
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A brucellosis that involves an infection caused by Brucella melitensis [NCBITaxon:29459] in cattle, goats, sheep and humans. The disease has symptom fever, has symptom malaise, has symptom anorexia, has symptom limb pain and has symptom back pain.","definition_xrefs":["DOID:14456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brucellosis","termid":"MONDO:0005683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Brucella melitensis brucellosis","secondary_identifiers":["UMLS:C0302362","ICD9:023.0","SCTID:427999003","MEDGEN:549869"],"termid":"MONDO:0001972","xrefs":{"Monarch":{"xref_id":"0001972"}}}


id: PBO:0048406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth arrest associated lncRNA 1","termid":"PBO:0048406"}


id: MONDO:0004839
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete neurofibroma (obsolete MONDO:0004839)","termid":"MONDO:0004839","xrefs":{"Monarch":{"xref_id":"0004839"}}}


id: PBO:0012557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit beta 5","termid":"PBO:0012557"}


id: MONDO:0002982
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A small round cell tumor with neural differentiation arising from the soft tissues.","definition_xrefs":["NCIT:C27471"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"extraskeletal Ewing sarcoma","termid":"MONDO:0018270"},{"relation_name":"is_a","term_name":"peripheral primitive neuroectodermal tumor","termid":"MONDO:0018271"},{"relation_name":"is_a","term_name":"extraskeletal Ewing sarcoma/peripheral primitive neuroectodermal tumor","termid":"MONDO:0021039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"peripheral primitive neuroectodermal tumor of soft tissues","secondary_identifiers":["UMLS:C1112437","DOID:4389","MEDGEN:205115"],"synonyms":[{"name":"peripheral neuroectodermal tumor of soft tissues","type":"exact"},{"name":"peripheral neuroectodermal tumor of the soft tissues","type":"exact"},{"name":"peripheral neuroectodermal tumour of soft tissues","type":"exact"},{"name":"peripheral neuroectodermal tumour of the soft tissues","type":"exact"},{"name":"peripheral neuroepithelioma of soft tissues","type":"exact"},{"name":"peripheral neuroepithelioma of the soft tissues","type":"exact"},{"name":"peripheral primitive neuroectodermal tumor of soft tissues","type":"exact"},{"name":"soft tissue peripheral neuroepithelioma","type":"related"}],"termid":"MONDO:0002982","xrefs":{"Monarch":{"xref_id":"0002982"}}}


id: PBO:0036159
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_oxidation_during_vegetative_growth","termid":"PBO:0036159"}


id: PBO:0029490
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_microcolony,_elongated_cells_(obsolete_FYPO:0002225)","termid":"PBO:0029490"}


id: MONDO:0030968
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"intellectual developmental disorder, autosomal recessive 76","secondary_identifiers":["MEDGEN:1808571","OMIM:619931","UMLS:C5677007","DOID:0081235"],"synonyms":[{"name":"MRT76","type":"exact"},{"name":"intellectual developmental disorder, autosomal recessive 76","type":"exact"},{"name":"mental retardation, autosomal recessive 76","type":"exact"}],"termid":"MONDO:0030968","xrefs":{"Monarch":{"xref_id":"0030968"}}}


id: MONDO:0018882
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Vasculitis represents a clinically heterogenous group of diseases of multifactorial etiology characterized by inflammation of either large-sized vessels (large-vessel vasculitis, e.g. Giant-cell arteritis and Takayasu arteritis), medium-sized vessels (medium-vessel vasculitis e.g. polyarteritis nodosa and Kawasaki disease), or small-sized vessels (small-vessel vasculitis, e.g. granulomatosis with polyangiitis, microscopic polyangiitis, immunoglobulin A vasculitis, and cutaneous leukocytoclastic angiitis). Vasculitis occurs at any age, may be acute or chronic, and manifests with general symptoms such as fever, weight loss and fatigue, as well as more specific clinical signs depending on the type of vessels and organs affected. The degree of severity is variable, ranging from life or sight threatening disease (e.g. Behcet disease) to relatively minor skin disease.","definition_xrefs":["Orphanet:52759"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vasculitis","secondary_identifiers":["MedDRA:10036023","Wikipedia:Vasculitis","MESH:D014657","GARD:18844","NCIT:C26912","DOID:865","EFO:0006803","icd11.foundation:572581721","MedDRA:10047115","MEDGEN:12054","SCTID:31996006","UMLS:C0042384"],"synonyms":[{"name":"angiitis","type":"related"},{"name":"systemic vasculitis","type":"narrow"}],"termid":"MONDO:0018882","xrefs":{"Monarch":{"xref_id":"0018882"}}}


id: FYPO:0004279
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of hypoxanthine DNA N-glycosylase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA N-glycosylase activity","termid":"FYPO:0008216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000661","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"abnormal hypoxanthine DNA N-glycosylase activity","termid":"FYPO:0004279"}


id: GO:0030816
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cAMP metabolic process (obsolete GO:0030816)","synonyms":[{"name":"activation of cAMP metabolic process","type":"narrow"},{"name":"positive regulation of 3',5' cAMP metabolic process","type":"exact"},{"name":"positive regulation of 3',5' cAMP metabolism","type":"exact"},{"name":"positive regulation of 3',5'-cAMP metabolic process","type":"exact"},{"name":"positive regulation of 3',5'-cAMP metabolism","type":"exact"},{"name":"positive regulation of adenosine 3',5'-cyclophosphate metabolic process","type":"exact"},{"name":"positive regulation of adenosine 3',5'-cyclophosphate metabolism","type":"exact"},{"name":"positive regulation of cAMP metabolism","type":"exact"},{"name":"positive regulation of cyclic AMP metabolic process","type":"exact"},{"name":"positive regulation of cyclic AMP metabolism","type":"exact"},{"name":"stimulation of cAMP metabolic process","type":"narrow"},{"name":"up regulation of cAMP metabolic process","type":"exact"},{"name":"up-regulation of cAMP metabolic process","type":"exact"},{"name":"upregulation of cAMP metabolic process","type":"exact"}],"termid":"GO:0030816"}


id: PBO:0113036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell wall mannoprotein that localizes to birth scars of daughter cells; linked to beta-1,3- and beta-1,6-glucan heteropolymer through phosphodiester bond; required for propionic acid resistance; targeted to vacuole via AP-3 pathway","termid":"PBO:0113036"}


id: GO:0018488
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an aromatic aldehyde + O2 + H2O = an aromatic acid + hydrogen peroxide.","definition_xrefs":["EC:1.2.3.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde oxidase activity","termid":"GO:0004031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"aryl-aldehyde oxidase activity","secondary_identifiers":["UM-BBD_reactionID:r0145","MetaCyc:ARYL-ALDEHYDE-OXIDASE-RXN","RHEA:18569"],"synonyms":[{"name":"aryl-aldehyde:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0018488"}


id: PBO:0109358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LAMTOR5 and SLC16A4 antisense RNA 1","termid":"PBO:0109358"}


id: PBO:0048104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FtsJ RNA 2'-O-methyltransferase 3","termid":"PBO:0048104"}


id: GO:0004045
data:
  {"annotated_genes":["SJAG_05221","SJAG_05008","SJAG_00936","SJAG_00308"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77685,79651,100465,103891],"is_not":false,"summary":null,"term":"GO:0004045"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: an N-acyl-L-alpha-aminoacyl-tRNA + H2O = an N-acyl-L-amino acid + a tRNA + H+.","definition_xrefs":["RHEA:54448"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00308":null,"SJAG_00936":null,"SJAG_05008":null,"SJAG_05221":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0140101","GO:0140098","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"peptidyl-tRNA hydrolase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:AMINOCYL-TRNA-HYDROLASE-RXN","GO:0019851","EC:3.1.1.29","GO:0019850"],"synonyms":[{"name":"D-tyrosyl-tRNA hydrolase activity","type":"narrow"},{"name":"N-substituted aminoacyl transfer RNA hydrolase activity","type":"related"},{"name":"aminoacyl-tRNA aminoacylhydrolase activity","type":"related"},{"name":"aminoacyl-tRNA hydrolase reaction","type":"exact"},{"name":"aminoacyl-transfer ribonucleate hydrolase activity","type":"related"}],"termid":"GO:0004045","terms_by_termid":{"GO:0004045":null}}


id: GO:0046586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the attachment of one cell to another cell via adhesion molecules that require the presence of calcium for the interaction.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-cell adhesion","termid":"GO:0022407"},{"relation_name":"regulates","term_name":"calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules","termid":"GO:0016339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"regulation of calcium-dependent cell-cell adhesion","termid":"GO:0046586"}


id: GO:0080064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A lipid oxidation process proceeding through a series of three successive monooxygenations of the alpha methyl group on the C4 carbon (CH3 to CH2OH to CHO to COOH) and resulting in this overall reaction: 4,4-dimethyl-9beta,19-cyclopropylsterol + 3 NADPH + 3 H+ + 3 O2 = 4-alpha-carboxy, 4-beta-methyl-9beta,19-cyclopropylsterol + 3 NADP+ + 3 H2O.","definition_xrefs":["GOC:pr","PMID:14653780"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid oxidation","termid":"GO:0034440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"4,4-dimethyl-9beta,19-cyclopropylsterol oxidation","synonyms":[{"name":"4,4-dimethyl-9beta,19-cyclopropylsterol-4alpha-methyl oxidase activity","type":"related"}],"termid":"GO:0080064"}


id: GO:0060565
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that prevents the activation of APC-Cdc20 complex activity regulating the mitotic cell cycle.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete inhibition of APC-Cdc20 complex activity (obsolete GO:0060565)","synonyms":[{"name":"inhibition of APC activity during mitotic cell cycle","type":"exact"},{"name":"inhibition of APC-Cdc20 complex activity","type":"exact"},{"name":"inhibition of APC/C activity during mitotic cell cycle","type":"related"},{"name":"inhibition of cyclosome activity during mitotic cell cycle","type":"related"},{"name":"inhibition of mitotic anaphase-promoting complex activity","type":"related"}],"termid":"GO:0060565"}


id: MONDO:1012185
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"necrotising myelopathy, non-human animal","termid":"MONDO:1011850"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"necrotising myelopathy, dog","secondary_identifiers":["OMIA:000706-9615"],"termid":"MONDO:1012185","xrefs":{"Monarch":{"xref_id":"1012185"}}}


id: PBO:0073815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 6 member 17","termid":"PBO:0073815"}


id: PBO:0064681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 17","termid":"PBO:0064681"}


id: PBO:0049022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPN-loop GTPase 3 pseudogene 1","termid":"PBO:0049022"}


id: GO:0140063
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A histone reader that specifically binds either to an unmodified histone.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone reader activity","termid":"GO:0140566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0140566"}],"interesting_parent_ids":["GO:0003674","GO:0060090","GO:0030674","GO:0140566"],"is_obsolete":false,"name":"unmodified histone reader activity","termid":"GO:0140063"}


id: MONDO:0015899
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any of the forms of primary aldosteronism that have a rare incidence.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare primary hyperaldosteronism (obsolete MONDO:0015899)","secondary_identifiers":["Orphanet:181415"],"synonyms":[{"name":"rare Conn syndrome","type":"exact"},{"name":"rare Conn's syndrome","type":"exact"},{"name":"rare primary aldosteronism","type":"exact"}],"termid":"MONDO:0015899","xrefs":{"Monarch":{"xref_id":"0015899"}}}


id: PBO:0084865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the small subunit; essential for viability, unlike most other mitoribosomal proteins","termid":"PBO:0084865"}


id: MONDO:0015256
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"blepharoptosis-cleft palate-ectrodactyly-dental anomalies syndrome","secondary_identifiers":["Orphanet:1258"],"synonyms":[{"name":"Rodini-Richieri Costa syndrome","type":"exact"}],"termid":"MONDO:0015256","xrefs":{"Monarch":{"xref_id":"0015256"}}}


id: FYPO:0001296
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of oleoyl-CoA ligase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal oleoyl-CoA ligase activity","synonyms":[{"name":"normal oleoyl-CoA synthetase activity","type":"exact"}],"termid":"FYPO:0001296"}


id: MONDO:1011252
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Keratitis that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"keratitis, non-human animal","termid":"MONDO:1010330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratitis, dog","secondary_identifiers":["OMIA:001287-9615"],"termid":"MONDO:1011252","xrefs":{"Monarch":{"xref_id":"1011252"}}}


id: PR:O60169
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC19F8.05 gene.","definition_xrefs":["UniProtKB:O60169","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C19F8.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19F8.05","synonyms":[{"name":"Spom972h-SPBC19F8.05","type":"exact"}],"termid":"PR:O60169"}


id: PBO:0028835
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_homologous_chromosome_pairing_at_cis-acting_homologous_chromosome_pairing_region","termid":"PBO:0028835"}


id: PBO:0039375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiomotin","termid":"PBO:0039375"}


id: PBO:0047207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 220 member A","termid":"PBO:0047207"}


id: MONDO:0032646
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital anomaly of kidney and urinary tract","termid":"MONDO:0019719"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"congenital anomalies of kidney and urinary tract 3","secondary_identifiers":["MEDGEN:1648427","UMLS:C4748921","OMIM:618270"],"synonyms":[{"name":"CAKUT3","type":"related"},{"name":"CONGENITAL ANOMALIES OF KIDNEY AND URINARY TRACT 3","type":"related"}],"termid":"MONDO:0032646","xrefs":{"Monarch":{"xref_id":"0032646"}}}


id: GO:0044443
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a pilus, a proteinaceous hair-like appendage on the surface of bacteria ranging from 2-8 nm in diameter.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete pilus part (obsolete GO:0044443)","synonyms":[{"name":"fimbrial part","type":"exact"},{"name":"fimbrium component","type":"exact"},{"name":"pilus component","type":"exact"}],"termid":"GO:0044443"}


id: MONDO:0009387
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial lipoprotein lipase deficiency is a rare genetic disorder is which a person lacks the enzyme lipoprotein lipase, a protein needed to break down fat molecules. Deficiency of this enzyme prevents affected individuals from properly digesting certain fats. This results in the accumulation of fatty droplets called chylomicrons in the blood and an increase in the blood concentration of triglycerides. Symptoms include episodes of abdominal pain, recurrent inflammation of the pancreas (pancreatitis), abnormal enlargement of the liver and/or spleen (hepatosplenomegaly), and the development of skin lesions known as erruptive xanthomas. Familial lipoprotein lipase deficiency is caused by changes (mutations) in the LPL gene. It is inherited in an autosomal recessive pattern. Treatment aims to control symptoms and blood triglyceride levels with a very low-fat diet. Treatment for individual symptoms (i.e. pancreatitis) involves following established treatment guidelines.","direct_ancestors":[{"relation_name":"is_a","term_name":"familial hyperlipidemia","termid":"MONDO:0001336"},{"relation_name":"is_a","term_name":"syndromic dyslipidemia","termid":"MONDO:0015905"},{"relation_name":"is_a","term_name":"familial chylomicronemia syndrome","termid":"MONDO:0018637"},{"relation_name":"is_a","term_name":"hyperlipoproteinemia","termid":"MONDO:0037748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"familial lipoprotein lipase deficiency","secondary_identifiers":["Orphanet:309015","NCIT:C84771","icd11.foundation:1829539217","MESH:D008072","OMIM:238600","SCTID:275598004","UMLS:C0023817","MEDGEN:7352","DOID:14118","ICD9:272.3","NORD:1129","GARD:12241"],"synonyms":[{"name":"Burger-Grutz syndrome","type":"related"},{"name":"Fredrickson type I hyperlipoproteinemia","type":"exact"},{"name":"Fredrickson type I lipaemia","type":"exact"},{"name":"LPL deficiency","type":"exact"},{"name":"chylomicronemia, familial","type":"related"},{"name":"endogenous hypertriglyceridaemia","type":"related"},{"name":"familial LPL deficiency","type":"exact"},{"name":"familial chylomicronemia syndrome","type":"broad"},{"name":"familial fat-induced hypertriglyceridemia","type":"related"},{"name":"familial hyperchylomicronemia","type":"related"},{"name":"familial hyperlipoproteinemia type I","type":"exact"},{"name":"familial lipoprotein lipase deficiency (disorder) [ambiguous]","type":"exact"},{"name":"familial lipoprotein lipase deficiency with type I phenotype","type":"exact"},{"name":"high density lipoprotein cholesterol level QTL 11","type":"exact"},{"name":"hypercholesterinaemic xanthomatosis","type":"exact"},{"name":"hyperchylomicronemia","type":"exact"},{"name":"hyperchylomicronemia, familial","type":"related"},{"name":"hyperlipemia, essential familial","type":"related"},{"name":"hyperlipemia, idiopathic, Burger-Grutz type","type":"related"},{"name":"hyperlipoproteinemia type I","type":"broad"},{"name":"hyperlipoproteinemia, type 1","type":"broad"},{"name":"hyperlipoproteinemia, type 1A","type":"related"},{"name":"hyperlipoproteinemia, type I","type":"broad"},{"name":"lipase D deficiency","type":"related"},{"name":"lipd deficiency","type":"related"},{"name":"lipoprotein lipase deficiency","type":"related"},{"name":"lipoprotein lipase deficiency, familial","type":"related"},{"name":"mixed hyperglyceridemia","type":"exact"},{"name":"type I hyperlipoproteinemia","type":"broad"}],"termid":"MONDO:0009387","xrefs":{"Monarch":{"xref_id":"0009387"}}}


id: PBO:0035831
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H4_acetylation_during_vegetative_growth","termid":"PBO:0035831"}


id: PBO:0086139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for mitochondrial ribosome small subunit biogenesis; null mutant is defective in respiration and in maturation of 15S rRNA; protein is localized to the mitochondrial inner membrane; null mutant interacts synthetically with prohibitin (Phb1p)","termid":"PBO:0086139"}


id: GO:0106142
data:
  {"annotated_genes":["SJAG_03713"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100215],"is_not":false,"summary":null,"term":"GO:0106142"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + adenine(645) in 25S rRNA = S-adenosyl-L-homocysteine + N(1)-methyladenine(645) in 25S rRNA.","definition_xrefs":["PMID:23180764","EC:2.1.1.287"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA (adenine) methyltransferase activity","termid":"GO:0016433"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03713":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0140098","GO:0003824","GO:0016741"],"is_obsolete":false,"name":"rRNA (adenine-N1-)-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:43792"],"synonyms":[{"name":"25S rRNA (adenine(645)-N(1))-methyltransferase","type":"related"},{"name":"25S rRNA m(1)A(645) methyltransferase","type":"related"}],"termid":"GO:0106142","terms_by_termid":{"GO:0106142":null}}


id: MONDO:1010334
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Retinitis pigmentosa that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal degeneration, non-human animal","termid":"MONDO:1010326"},{"relation_name":"is_a","term_name":"perceptual disorders, non-human animal","termid":"MONDO:1011343"},{"relation_name":"is_a","term_name":"hereditary neurological disease, non-human animal","termid":"MONDO:1012972"},{"relation_name":"is_a","term_name":"inborn errors of metabolism, non-human animal","termid":"MONDO:1012979"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinitis pigmentosa, non-human animal","secondary_identifiers":["OMIA:001413"],"termid":"MONDO:1010334","xrefs":{"Monarch":{"xref_id":"1010334"}}}


id: PBO:0067047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 67, pseudogene","termid":"PBO:0067047"}


id: GO:0075014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The increase in size or mass of symbiont, or the progression of the symbiont from an initial condition to a later condition, occurring on or near its host rhizosphere. The host rhizosphere is defined as total below-ground surfaces of a plant as a habitat for its symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete growth or development of symbiont on or near host rhizosphere (obsolete GO:0075014)","synonyms":[{"name":"growth or development of symbiont on or near host rhizosphere","type":"exact"}],"termid":"GO:0075014"}


id: MONDO:0100140
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A COVID-19 infection that presents with various signs and symptoms (e.g., fever, cough, sore throat, malaise, headache, muscle pain) without shortness of breath, dyspnea, or abnormal imaging.","gene_count":0,"genotype_count":0,"name":"obsolete mild COVID-19 infection (obsolete MONDO:0100140)","secondary_identifiers":["DOID:0081014"],"termid":"MONDO:0100140","xrefs":{"Monarch":{"xref_id":"0100140"}}}


id: GO:1900872
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving pentadec-1-ene.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkene metabolic process","termid":"GO:0043449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pentadec-1-ene metabolic process","synonyms":[{"name":"pentadec-1-ene metabolism","type":"exact"}],"termid":"GO:1900872"}


id: PBO:0061104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurolysin","termid":"PBO:0061104"}


id: GO:1904324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of inhibitory G protein-coupled receptor phosphorylation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:15937517"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein phosphorylation","termid":"GO:0001933"},{"relation_name":"is_a","term_name":"positive regulation of G protein-coupled receptor signaling pathway","termid":"GO:0045745"},{"relation_name":"is_a","term_name":"regulation of inhibitory G protein-coupled receptor phosphorylation","termid":"GO:1904323"},{"relation_name":"negatively_regulates","term_name":"inhibitory G protein-coupled receptor phosphorylation","termid":"GO:0002030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of inhibitory G protein-coupled receptor phosphorylation","synonyms":[{"name":"down regulation of inhibitory G-protein coupled receptor phosphorylation","type":"exact"},{"name":"down-regulation of inhibitory G-protein coupled receptor phosphorylation","type":"exact"},{"name":"downregulation of inhibitory G-protein coupled receptor phosphorylation","type":"exact"},{"name":"inhibition of inhibitory G-protein coupled receptor phosphorylation","type":"narrow"},{"name":"negative regulation of inhibitory G-protein coupled receptor phosphorylation","type":"exact"}],"termid":"GO:1904324"}


id: MONDO:0012368
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aminoacylase 1 deficiency (ACY1D) is an inborn error of metabolism marked by a characteristic pattern of urinary N-acetyl amino acid excretion and neurologic symptoms.","definition_xrefs":["Orphanet:137754"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of amino acid metabolism","termid":"MONDO:0004736"},{"relation_name":"is_a","term_name":"inborn aminoacylase deficiency","termid":"MONDO:0017686"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"aminoacylase 1 deficiency","secondary_identifiers":["SCTID:709282004","MESH:C538246","EFO:1001981","GARD:9741","OMIM:609924","ICD9:270.8","MEDGEN:324393","UMLS:C1835922"],"synonyms":[{"name":"ACY1 deficiency","type":"related"},{"name":"ACY1D","type":"exact"},{"name":"N-acyl-L-amino acid amidohydrolase deficiency","type":"exact"},{"name":"aminoacylase 1 deficiency","type":"exact"},{"name":"deficiency of the aminoacylase-1 enzyme","type":"related"},{"name":"neurological conditions associated with aminoacylase 1 deficiency","type":"exact"}],"termid":"MONDO:0012368","xrefs":{"Monarch":{"xref_id":"0012368"}}}


id: PBO:0040862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic leucine zipper nuclear factor 1","termid":"PBO:0040862"}


id: MONDO:0019939
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"schizophrenia","termid":"MONDO:0005090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"early-onset schizophrenia","secondary_identifiers":["GARD:19352","MEDGEN:1800824","Orphanet:96369","UMLS:C1656427"],"termid":"MONDO:0019939","xrefs":{"Monarch":{"xref_id":"0019939"}}}


id: PBO:0071201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 42","termid":"PBO:0071201"}


id: PBO:0065924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB, member of RAS oncogene family like 3","termid":"PBO:0065924"}


id: PR:Q10409
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tsr3 gene.","definition_xrefs":["UniProtKB:Q10409","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein tsr3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F3.04c","synonyms":[{"name":"Spom972h-tsr3","type":"exact"}],"termid":"PR:Q10409"}


id: MONDO:0011116
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lung agenesis - heart defect - thumb anomalies is a very rare syndrome characterized by unilateral complete or partial lung agenesis, congenital cardiac defects and ipsilateral thumb anomalies.","definition_xrefs":["Orphanet:1120"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete non-syndromic respiratory or mediastinal malformation (obsolete MONDO:0015221)","termid":"MONDO:0015221"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lung agenesis-heart defect-thumb anomalies syndrome","secondary_identifiers":["GARD:3378","MESH:C535708","SCTID:721976003","UMLS:C3275954","MEDGEN:477585","OMIM:601612"],"synonyms":[{"name":"LACHT","type":"related"},{"name":"Manouvrier syndrome","type":"related"},{"name":"Mardini-Nyhan association","type":"related"},{"name":"Mardini-Nyhan syndrome","type":"exact"},{"name":"lung agenesis heart defect thumb anomalies","type":"related"},{"name":"lung agenesis, congenital heart defects, and thumb anomalies syndrome","type":"related"},{"name":"pulmonary aplasia and triphalangia of the thumb","type":"related"}],"termid":"MONDO:0011116","xrefs":{"Monarch":{"xref_id":"0011116"}}}


id: FYPO:0005198
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is decreased during a cellular response to ultraviolet light.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein kinase activity","termid":"FYPO:0001382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000661","FYPO:0000707","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"decreased protein kinase activity during cellular response to UV","synonyms":[{"name":"decreased protein kinase activity during cellular response to ultraviolet light","type":"exact"},{"name":"reduced protein kinase activity during cellular response to UV","type":"exact"}],"termid":"FYPO:0005198"}


id: GO:0031765
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 2 galanin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galanin receptor binding","termid":"GO:0031763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"type 2 galanin receptor binding","synonyms":[{"name":"type 2 galanin receptor ligand","type":"narrow"}],"termid":"GO:0031765"}


id: MONDO:0023007
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic disorder, characterized by under-development of bone marrow and neurological disorders such as weakness on one side of the body, agenesis of corpus callosum and hydrocephalus.","definition_xrefs":["PMID:2264478"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"bone marrow disorder","termid":"MONDO:0003225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"Drachtman Weinblatt Sitarz syndrome","secondary_identifiers":["UMLS:C2930947","GARD:1913","MESH:C535603","MEDGEN:419292"],"synonyms":[{"name":"Drachtman Weinblatt Sitarz syndrome","type":"exact"},{"name":"marrow hypoplasia associated with congenital neurologic anomalies","type":"related"}],"termid":"MONDO:0023007","xrefs":{"Monarch":{"xref_id":"0023007"}}}


id: GO:0102772
data:
  {"annotated_genes":["SJAG_04913","SJAG_05311"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74257,93628],"is_not":false,"summary":null,"term":"GO:0102772"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a dihydroceramide + 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 = a phytoceramide + 2 Fe(III)-[cytochrome b5] + H2O.","definition_xrefs":["EC:1.14.18.5","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, another compound as one donor, and incorporation of one atom of oxygen","termid":"GO:0016716"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04913":null,"SJAG_05311":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"sphingolipid C4-monooxygenase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-14250","Reactome:R-HSA-428260","RHEA:55808"],"synonyms":[{"name":"sphingolipid long-chain base 4-hydroxylase activity","type":"related"}],"termid":"GO:0102772","terms_by_termid":{"GO:0102772":null}}


id: PBO:0071675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 7","termid":"PBO:0071675"}


id: SO:0000771
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A quantitative trait locus (QTL) is a polymorphic locus which contains alleles that differentially affect the expression of a continuously distributed phenotypic trait. Usually it is a marker described by statistical association to quantitative variation in the particular phenotypic trait that is thought to be controlled by the cumulative action of alleles at multiple loci.","direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"QTL","synonyms":[{"name":"quantitative trait locus","type":"exact"}],"termid":"SO:0000771"}


id: GO:0050174
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-phenylalanine = phenylethylamine + CO2.","definition_xrefs":["MetaCyc:PHENYLALANINE-DECARBOXYLASE-RXN","EC:4.1.1.53"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"phenylalanine decarboxylase activity","secondary_identifiers":["RHEA:19717"],"synonyms":[{"name":"L-phenylalanine carboxy-lyase (phenylethylamine-forming)","type":"exact"},{"name":"L-phenylalanine carboxy-lyase activity","type":"related"},{"name":"L-phenylalanine decarboxylase activity","type":"related"},{"name":"aromatic L-amino acid decarboxylase activity","type":"broad"}],"termid":"GO:0050174"}


id: MONDO:0009024
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by cortical blindness, intellectual deficit, and polydactyly.","definition_xrefs":["Orphanet:1389"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"disorder of visual system","termid":"MONDO:0024458"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cortical blindness-intellectual disability-polydactyly syndrome","secondary_identifiers":["GARD:1548","MEDGEN:347487","UMLS:C1857568","MESH:C565674","OMIM:218010"],"synonyms":[{"name":"cortical blindness, retardation, and postaxial polydactyly","type":"related"}],"termid":"MONDO:0009024","xrefs":{"Monarch":{"xref_id":"0009024"}}}


id: PBO:0043207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC28 protein kinase regulatory subunit 1B","termid":"PBO:0043207"}


id: PBO:0053270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte immunoglobulin like receptor A3","termid":"PBO:0053270"}


id: PBO:0061706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear transport factor 2","termid":"PBO:0061706"}


id: PBO:0080380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS11 divergent transcript","termid":"PBO:0080380"}


id: GO:0004843
data:
  {"annotated_genes":["SJAG_00087","SJAG_01768","SJAG_04497","SJAG_04651","SJAG_03429","SJAG_01481","SJAG_00795","SJAG_01528","SJAG_00644","SJAG_00966","SJAG_02419","SJAG_04538","SJAG_04215","SJAG_03686","SJAG_00764","SJAG_00573","SJAG_02774","SJAG_02341","SJAG_03752","SJAG_02244","SJAG_01312","SJAG_00742","SJAG_00546"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[63548,65157,67199,68555,70898,71774,73670,74298,74590,75442,75448,75870,76915,78110,78167,78234,78663,79280,79801,82004,95221,99830,116171],"is_not":false,"summary":null,"term":"GO:0004843"}]},"cv_name":"molecular_function","definition":"An thiol-dependent isopeptidase activity that cleaves ubiquitin from a target protein to which it is conjugated.","definition_xrefs":["PMID:30783221","GOC:jh2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteine-type peptidase activity","termid":"GO:0008234"},{"relation_name":"is_a","term_name":"deubiquitinase activity","termid":"GO:0101005"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00087":null,"SJAG_00546":null,"SJAG_00573":null,"SJAG_00644":null,"SJAG_00742":null,"SJAG_00764":null,"SJAG_00795":null,"SJAG_00966":null,"SJAG_01312":null,"SJAG_01481":null,"SJAG_01528":null,"SJAG_01768":null,"SJAG_02244":null,"SJAG_02341":null,"SJAG_02419":null,"SJAG_02774":null,"SJAG_03429":null,"SJAG_03686":null,"SJAG_03752":null,"SJAG_04215":null,"SJAG_04497":null,"SJAG_04538":null,"SJAG_04651":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0008233","GO:0140096","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"cysteine-type deubiquitinase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-8865182","Reactome:R-HSA-6807118","Reactome:R-HSA-5689972","Reactome:R-HSA-6782628","Reactome:R-HSA-5690196","Reactome:R-HSA-5697009","Reactome:R-HSA-5696968","Reactome:R-HSA-6781814","Reactome:R-HSA-5689973","Reactome:R-HSA-5690152","Reactome:R-HSA-8853514","Reactome:R-HSA-5653770","Reactome:R-HSA-8869456","Reactome:R-HSA-5696947","Reactome:R-HSA-9033491","Reactome:R-HSA-6782820","EC:3.4.19.12","Reactome:R-HSA-8873946","Reactome:R-HSA-4641236","Reactome:R-HSA-5696958","Reactome:R-HSA-5690759","Reactome:R-HSA-5696605","Reactome:R-HSA-8853515","Reactome:R-HSA-8986083","Reactome:R-HSA-3215295","Reactome:R-HSA-6782106","Reactome:R-HSA-8853503","Reactome:R-HSA-5696534","Reactome:R-HSA-6786171","Reactome:R-HSA-9033478","Reactome:R-HSA-5690080","Reactome:R-HSA-5690159","Reactome:R-HSA-5696997","Reactome:R-HSA-2179291","Reactome:R-HSA-5690790","Reactome:R-HSA-5696627","Reactome:R-HSA-5689950","Reactome:R-HSA-3215310","Reactome:R-HSA-6781897","Reactome:R-HSA-5688837","Reactome:R-HSA-5655466","Reactome:R-HSA-5690157","Reactome:R-HSA-5688797","Reactome:R-HSA-5691381","Reactome:R-HSA-870437","Reactome:R-HSA-6782069","Reactome:R-HSA-1358795","Reactome:R-HSA-5696945","Reactome:R-HSA-5696600","Reactome:R-HSA-9653514","Reactome:R-HSA-8875443","Reactome:R-HSA-5696465","Reactome:R-HSA-8853529","Reactome:R-HSA-5696960","Reactome:R-HSA-6781779","Reactome:R-HSA-5696914","Reactome:R-HSA-3640872","Reactome:R-HSA-8862184","Reactome:R-HSA-5696872","GO:0036459","Reactome:R-HSA-5690319","Reactome:R-HSA-6783177","Reactome:R-HSA-6781764","Reactome:R-HSA-6807206","Reactome:R-HSA-5696564"],"synonyms":[{"name":"UBP","type":"narrow"},{"name":"UCH2","type":"narrow"},{"name":"deubiquitinase","type":"broad"},{"name":"deubiquitinase activity","type":"broad"},{"name":"deubiquitinating enzyme","type":"broad"},{"name":"deubiquitylase","type":"broad"},{"name":"thiol-dependent deubiquitinase","type":"exact"},{"name":"thiol-dependent ubiquitin-specific protease activity","type":"exact"},{"name":"thiol-dependent ubiquitinyl hydrolase activity","type":"exact"},{"name":"ubiquitin C-terminal hydrolase","type":"related"},{"name":"ubiquitin hydrolase activity","type":"broad"},{"name":"ubiquitin-specific protease activity","type":"broad"},{"name":"ubiquitinyl hydrolase 1 activity","type":"narrow"},{"name":"ubiquitinyl hydrolase activity","type":"broad"}],"termid":"GO:0004843","terms_by_termid":{"GO:0004843":null}}


id: FYPO:0004172
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is decreased during a cellular response to heat.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein kinase activity","termid":"FYPO:0001382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000707","FYPO:0000661","FYPO:0000652"],"is_obsolete":false,"name":"decreased protein kinase activity during cellular response to heat","synonyms":[{"name":"decreased protein kinase activity during cellular response to heat stress","type":"exact"},{"name":"reduced protein kinase activity during cellular response to heat","type":"exact"}],"termid":"FYPO:0004172"}


id: PBO:0001178
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.1.1.17","termid":"PBO:0001178"}


id: PBO:0039401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANAPC1 pseudogene 6","termid":"PBO:0039401"}


id: BFO:0000063
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x precedes y if and only if the time point at which x ends is before or equivalent to the time point at which y starts. Formally: x precedes y iff ω(x) <= α(y), where α is a function that maps a process to a start point, and ω is a function that maps a process to an end point.","direct_ancestors":[{"relation_name":"is_a","term_name":"temporally_related_to","termid":"RO:0002222"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"precedes","termid":"BFO:0000063"}


id: MONDO:0859172
data:
  {"annotated_genes":["SJAG_04731"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89146],"is_not":false,"summary":null,"term":"MONDO:0859172"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hemolytic anemia","termid":"MONDO:0003664"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04731":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"hemolytic disease of fetus and newborn, RH-induced","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1789316","OMIM:619462","UMLS:C0748400"],"termid":"MONDO:0859172","terms_by_termid":{"MONDO:0859172":null},"xrefs":{"Monarch":{"xref_id":"0859172"}}}


id: GO:0052728
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-violaxanthin = all-trans-capsorubin.","definition_xrefs":["RHEA:21752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity","termid":"GO:0016860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"capsorubin synthase activity","secondary_identifiers":["MetaCyc:RXN-7946"],"synonyms":[{"name":"CCS","type":"broad"},{"name":"capsanthin-capsorubin synthase activity","type":"broad"},{"name":"ketoxanthophyll synthase activity","type":"broad"},{"name":"violaxanthin-capsorubin isomerase (ketone-forming) activity","type":"exact"}],"termid":"GO:0052728"}


id: GO:0047331
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycerol + diphosphate = glycerol 1-phosphate + H+ + phosphate.","definition_xrefs":["RHEA:13689","EC:2.7.1.79"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016301","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"diphosphate-glycerol phosphotransferase activity","secondary_identifiers":["MetaCyc:2.7.1.79-RXN","KEGG_REACTION:R01044"],"synonyms":[{"name":"PPi-glycerol phosphotransferase activity","type":"related"},{"name":"diphosphate:glycerol 1-phosphotransferase activity","type":"related"},{"name":"pyrophosphate--glycerol phosphotransferase activity","type":"related"}],"termid":"GO:0047331"}


id: GO:0090168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The reformation of the Golgi following its breakdown and partitioning contributing to Golgi inheritance.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi organization","termid":"GO:0007030"},{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"part_of","term_name":"Golgi inheritance","termid":"GO:0048313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"Golgi reassembly","synonyms":[{"name":"Golgi apparatus reassembly","type":"exact"}],"termid":"GO:0090168"}


id: MONDO:0010790
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare mitochondrial oxidative phosphorylation disorder characterized by myoclonic seizures, ataxia, generalized epilepsy, muscle weakness and ragged red fibers in the muscle biopsy.","definition_xrefs":["Orphanet:551"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"progressive myoclonus epilepsy","termid":"MONDO:0020074"},{"relation_name":"excluded_subClassOf","term_name":"metabolic epilepsy","termid":"MONDO:0100033"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"mitochondrial encephalomyopathy","termid":"MONDO:0004675"},{"relation_name":"is_a","term_name":"progressive myoclonus epilepsy","termid":"MONDO:0020074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066","MONDO:0002320","MONDO:0005027","MONDO:0005336"],"is_obsolete":false,"name":"MERRF syndrome","secondary_identifiers":["ICD10CM:E88.42","SCTID:68448003","NORD:1441","DOID:310","OMIM:545000","UMLS:C0162672","ICD9:277.87","MedDRA:10069825","GARD:7144","MESH:D017243","NANDO:1200177","NANDO:2200526","MEDGEN:56486","NCIT:C84889"],"synonyms":[{"name":"Fukuhara syndrome","type":"exact"},{"name":"MERRF","type":"exact"},{"name":"MERRF syndrome","type":"exact"},{"name":"myoclonic epilepsy - ragged red fibers","type":"exact"},{"name":"myoclonic epilepsy - ragged red fibres","type":"exact"},{"name":"myoclonic epilepsy associated with ragged red fibers","type":"related"},{"name":"myoclonic epilepsy associated with ragged red fibres","type":"related"},{"name":"myoclonic epilepsy associated with ragged-RED fibers","type":"related"},{"name":"myoclonic epilepsy associated with ragged-RED fibres","type":"related"},{"name":"myoclonic epilepsy with ragged red fibers","type":"related"},{"name":"myoclonic epilepsy with ragged red fibres","type":"related"},{"name":"myoclonus epilepsy and ragged red fibers","type":"exact"},{"name":"myoclonus epilepsy and ragged red fibres","type":"exact"},{"name":"myoclonus epilepsy associated with ragged-red fibers","type":"exact"},{"name":"myoclonus epilepsy associated with ragged-red fibres","type":"exact"},{"name":"myoclonus with epilepsy and with ragged Red fibers","type":"exact"},{"name":"myoclonus with epilepsy and with ragged Red fibers (MERRF syndrome)","type":"exact"},{"name":"myoclonus with epilepsy and with ragged Red fibres","type":"exact"},{"name":"myoclonus with epilepsy and with ragged Red fibres (MERRF syndrome)","type":"exact"},{"name":"myoencephalopathy ragged-red fiber disease","type":"related"},{"name":"myoencephalopathy ragged-red fibre disease","type":"related"}],"termid":"MONDO:0010790","xrefs":{"Monarch":{"xref_id":"0010790"}}}


id: PBO:0054005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1333","termid":"PBO:0054005"}


id: MONDO:0004392
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An extraskeletal myxoid chondrosarcoma arising from the structures within the cranium.","definition_xrefs":["NCIT:C5462"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system sarcoma","termid":"MONDO:0002217"},{"relation_name":"is_a","term_name":"extraskeletal myxoid chondrosarcoma","termid":"MONDO:0012825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"intracranial extraskeletal myxoid chondrosarcoma","secondary_identifiers":["UMLS:C1334238","DOID:7903","MEDGEN:232660"],"synonyms":[{"name":"intracranial chondrosarcoma","type":"related"},{"name":"intracranial extraskeletal myxoid chondrosarcoma","type":"exact"}],"termid":"MONDO:0004392","xrefs":{"Monarch":{"xref_id":"0004392"}}}


id: MONDO:0006845
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mycobacterium infections of the male reproductive tract (genitalia, male).","definition_xrefs":["MESH:D014389"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male reproductive system disorder","termid":"MONDO:0003150"},{"relation_name":"is_a","term_name":"urogenital tuberculosis","termid":"MONDO:0006002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"male genital tuberculosis","secondary_identifiers":["MedDRA:10061234","SCTID:240379005","UMLS:C0041317","MEDGEN:52886"],"synonyms":[{"name":"Male genital Tuberculoses","type":"related"},{"name":"Tuberculoses, Male genital","type":"related"},{"name":"genital Tuberculoses, Male","type":"related"},{"name":"genital tuberculosis, Male","type":"related"},{"name":"male genital tuberculosis","type":"exact"},{"name":"male reproductive system tuberculosis","type":"exact"}],"termid":"MONDO:0006845","xrefs":{"Monarch":{"xref_id":"0006845"}}}


id: PBO:0088763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidyl-prolyl cis-trans isomerase","termid":"PBO:0088763"}


id: MONDO:0033655
data:
  {"annotated_genes":["SJAG_01355"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87533],"is_not":false,"summary":null,"term":"MONDO:0033655"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex IV deficiency, nuclear-type","termid":"MONDO:0033885"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01355":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex 4 deficiency, nuclear type 20","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0070505","MEDGEN:1771040","UMLS:C5436726","OMIM:619064","GARD:16417"],"synonyms":[{"name":"MC4DN20","type":"exact"},{"name":"mitochondrial complex IV deficiency, nuclear type 20","type":"exact"}],"termid":"MONDO:0033655","terms_by_termid":{"MONDO:0033655":null},"xrefs":{"Monarch":{"xref_id":"0033655"}}}


id: GO:0008793
data:
  {"annotated_genes":["SJAG_03312"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100162],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004838"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: an L-alpha aromatic amino acid + 2-oxoglutarate = an aromatic oxo acid + L-glutamate.","definition_xrefs":["RHEA:17533"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0016769","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"aromatic-amino-acid transaminase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:2.6.1.57-RXN"],"synonyms":[{"name":"ArAT","type":"related"},{"name":"aromatic amino acid aminotransferase activity","type":"exact"},{"name":"aromatic amino acid transferase activity","type":"exact"},{"name":"aromatic aminotransferase activity","type":"exact"},{"name":"aromatic-amino-acid:2-oxoglutarate aminotransferase activity","type":"exact"}],"termid":"GO:0008793","terms_by_termid":{"GO:0004838":null}}


id: PBO:0040601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAG cochaperone 5","termid":"PBO:0040601"}


id: FYPO:0006501
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which actin fusion focus assembly begins earlier than normal. An actin fusion focus normally forms during mating at the site where the two cells will fuse.","definition_xrefs":["PomBase:mah","PMID:29453312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin fusion focus assembly","termid":"FYPO:0006108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0004803"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0004803","FYPO:0000301","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"premature actin fusion focus assembly","synonyms":[{"name":"advanced actin fusion focus assembly","type":"exact"},{"name":"premature actin fusion focus formation","type":"exact"}],"termid":"FYPO:0006501"}


id: PBO:0028898
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_pear-shaped_vegetative_cell","termid":"PBO:0028898"}


id: GO:0031400
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the covalent alteration of one or more amino acid residues within a protein.","definition_xrefs":["GOC:mah","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein modification process","termid":"GO:0031399"},{"relation_name":"is_a","term_name":"negative regulation of protein metabolic process","termid":"GO:0051248"},{"relation_name":"negatively_regulates","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein modification process","synonyms":[{"name":"down regulation of protein modification","type":"exact"},{"name":"down-regulation of protein modification","type":"exact"},{"name":"downregulation of protein modification","type":"exact"},{"name":"inhibition of protein modification","type":"narrow"}],"termid":"GO:0031400"}


id: PBO:0075885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST6GAL2 intronic transcript 1","termid":"PBO:0075885"}


id: PBO:0072219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S19 pseudogene 2","termid":"PBO:0072219"}


id: MONDO:0012477
data:
  {"annotated_genes":["SJAG_02295"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86836],"is_not":false,"summary":null,"term":"MONDO:0012477"}]},"cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the SNRNP200 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"},{"relation_name":"is_a","term_name":"SNRNP200-related dominant retinopathy","termid":"MONDO:0800098"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02295":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005328","MONDO:0005066"],"is_obsolete":false,"name":"retinitis pigmentosa 33","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1835895","GARD:10400","ICD10CM:H35.5","MESH:C563676","DOID:0110366","MEDGEN:332080","OMIM:610359"],"synonyms":[{"name":"RP 33","type":"related"},{"name":"RP33","type":"exact"},{"name":"SNRNP200 retinitis pigmentosa","type":"exact"},{"name":"retinitis pigmentosa 33","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in SNRNP200","type":"exact"},{"name":"retinitis pigmentosa type 33","type":"exact"}],"termid":"MONDO:0012477","terms_by_termid":{"MONDO:0012477":null},"xrefs":{"Monarch":{"xref_id":"0012477"}}}


id: GO:0070626
data:
  {"annotated_genes":["SJAG_02850"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78725],"is_not":false,"summary":null,"term":"GO:0070626"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate = fumarate + 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide.","definition_xrefs":["RHEA:23920"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amidine-lyase activity","termid":"GO:0016842"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02850":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"(S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido) succinate lyase (fumarate-forming) activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-73828","KEGG_REACTION:R04559","Reactome:R-HSA-73800","MetaCyc:AICARSYN-RXN"],"synonyms":[{"name":"(S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate AMP-lyase (fumarate-forming) activity","type":"related"},{"name":"SAICAR-lyase (fumarate forming) activity","type":"related"},{"name":"adenylosuccinase activity","type":"broad"},{"name":"adenylosuccinate lyase activity","type":"broad"},{"name":"succino AMP-lyase activity","type":"broad"}],"termid":"GO:0070626","terms_by_termid":{"GO:0070626":null}}


id: PBO:0056779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mex-3 RNA binding family member A","termid":"PBO:0056779"}


id: PBO:0087087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L5; nascent Rpl5p is bound by specific chaperone Syo1p during translation; homologous to mammalian ribosomal protein L5 and bacterial L18; binds 5S rRNA and is required for 60S subunit assembly","termid":"PBO:0087087"}


id: PATO:0002504
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed posterodorsally.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"posterodorsal orientation","synonyms":[{"name":"posterodorsally directed","type":"exact"}],"termid":"PATO:0002504"}


id: PR:Q9UT22
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC9.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UT22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylthioribulose-1-phosphate dehydratase-like protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9.06c","synonyms":[{"name":"Spom972h-SPAC9.06c","type":"exact"}],"termid":"PR:Q9UT22"}


id: GO:0003355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed, self-propelled movement of cilia of inner ear epithelial cells, resulting the aggregation of otolith seed particles.","definition_xrefs":["GOC:krc","GOC:dph","PMID:19043402"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cilium movement involved in extracellular fluid movement","termid":"GO:0003351"},{"relation_name":"part_of","term_name":"otolith formation","termid":"GO:0032475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"cilium movement involved in otolith formation","termid":"GO:0003355"}


id: PBO:0052625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 4","termid":"PBO:0052625"}


id: PBO:0053397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 327","termid":"PBO:0053397"}


id: GO:0140235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A polyadenylation event (the enzymatic addition of a sequence of adenylyl residues at the 3' end of an RNA molecule) that takes place at a postsynapse.","definition_xrefs":["PMID:22727665"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA processing","termid":"GO:0006396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"RNA polyadenylation at postsynapse","termid":"GO:0140235"}


id: PBO:0109040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PET117 pseudogene 1","termid":"PBO:0109040"}


id: PBO:0030754
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_glutamate_dehydrogenase_(NADP+)_activity","termid":"PBO:0030754"}


id: PBO:0058789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7158","termid":"PBO:0058789"}


id: GO:0045170
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A germline specific spherical organelle, rich in membrane skeletal proteins. Precursor to the fusome.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membraneless organelle","termid":"GO:0043232"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"spectrosome","termid":"GO:0045170"}


id: PBO:0082411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bHLH/Zip transcription factor for retrograde (RTG) and TOR pathways; forms a complex with another bHLH/Zip protein, Rtg1p, to activate the pathways; target of Hog1p","termid":"PBO:0082411"}


id: PBO:0065203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA processing factor 38A","termid":"PBO:0065203"}


id: PBO:0091541
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-A amino terminus domain (NTD) Isomerase","termid":"PBO:0091541"}


id: PBO:0071565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 31","termid":"PBO:0071565"}


id: PBO:0062628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily H member 5 pseudogene","termid":"PBO:0062628"}


id: GO:0032182
data:
  {"annotated_genes":["SJAG_01585","SJAG_03189","SJAG_01134","SJAG_00805","SJAG_02021","SJAG_04384","SJAG_00521","SJAG_00941","SJAG_03756","SJAG_02451","SJAG_02116","SJAG_02833","SJAG_01936","SJAG_01467","SJAG_00821","SJAG_03250","SJAG_00033","SJAG_01051","SJAG_04379","SJAG_00312","SJAG_00907","SJAG_00439","SJAG_04024","SJAG_02912"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58460,75908],"is_not":false,"summary":null,"term":"GO:0032182"},{"annotations":[61938,79481,68449,73935,75261,80249,74830,75807,80214,81618,78450,69923,63575,80827,60866,77501,62374,58504,73850,67314,73023,79141],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043130"}]},"cv_name":"molecular_function","definition":"Binding to a small conjugating protein such as ubiquitin or a ubiquitin-like protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00033":null,"SJAG_00312":null,"SJAG_00439":null,"SJAG_00521":null,"SJAG_00805":null,"SJAG_00821":null,"SJAG_00907":null,"SJAG_00941":null,"SJAG_01051":null,"SJAG_01134":null,"SJAG_01467":null,"SJAG_01585":null,"SJAG_01936":null,"SJAG_02021":null,"SJAG_02116":null,"SJAG_02451":null,"SJAG_02833":null,"SJAG_02912":null,"SJAG_03189":null,"SJAG_03250":null,"SJAG_03756":null,"SJAG_04024":null,"SJAG_04379":null,"SJAG_04384":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"ubiquitin-like protein binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000117":null},"synonyms":[{"name":"small conjugating protein binding","type":"exact"}],"termid":"GO:0032182","terms_by_termid":{"GO:0032182":null,"GO:0043130":null}}


id: GO:0102459
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 8-oxo-dADP + H2O = 8-oxo-dAMP + hydrogenphosphate + H+.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside diphosphate phosphatase activity","termid":"GO:0017110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"8-oxo-dADP diphosphate phosphatase activity","secondary_identifiers":["MetaCyc:RXN-14005"],"synonyms":[{"name":"8-oxo-deoxyadenine diphosphate phosphatase activity","type":"exact"}],"termid":"GO:0102459"}


id: PBO:0031730
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_meiosis","termid":"PBO:0031730"}


id: GO:0002858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of natural killer cell mediated cytotoxicity directed against tumor cell target.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of natural killer cell mediated immune response to tumor cell","termid":"GO:0002855"},{"relation_name":"is_a","term_name":"regulation of natural killer cell mediated cytotoxicity","termid":"GO:0042269"},{"relation_name":"regulates","term_name":"natural killer cell mediated cytotoxicity directed against tumor cell target","termid":"GO:0002420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of natural killer cell mediated cytotoxicity directed against tumor cell target","termid":"GO:0002858"}


id: FYPO:0000237
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A gene expression phenotype in which regulation of translation in response to nitrogen starvation is abnormal. Translation may be down-regulated to a greater extent than normal, and may not be restored to normal levels upon prolonged nitrogen starvation.","definition_xrefs":["PMID:18065650","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to nitrogen starvation","termid":"FYPO:0000152"},{"relation_name":"is_a","term_name":"abnormal regulation of translation in response to stress","termid":"FYPO:0000263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000298","FYPO:0006551"],"is_obsolete":false,"name":"abnormal regulation of translation in response to nitrogen starvation","synonyms":[{"name":"abnormal regulation of translation in response to nitrogen depletion","type":"exact"},{"name":"abnormal regulation of translation in response to nitrogen deprivation","type":"exact"},{"name":"abnormal translational regulation in response to nitrogen starvation","type":"exact"},{"name":"defective in recovery of translation during nitrogen starvation","type":"related"}],"termid":"FYPO:0000237"}


id: GO:0141194
data:
  {"annotated_genes":["SJAG_00087","SJAG_03356","SJAG_03689","SJAG_03680","SJAG_04141","SJAG_02621","SJAG_01008","SJAG_03042","SJAG_02594","SJAG_02119","SJAG_01540","SJAG_04061","SJAG_01601","SJAG_00414","SJAG_02409","SJAG_01331","SJAG_03916","SJAG_00058","SJAG_03193","SJAG_04030","SJAG_04574","SJAG_04253","SJAG_02725","SJAG_00756"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115850],"is_not":false,"summary":null,"term":"GO:0141194"},{"annotations":[108141],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902795"},{"annotations":[98546,90590,117848,100943,119849,114068,112505,108385,120699,113064,116169,119967,115532,90647,95906,93087,97156,101383,117287,119564,112338,116429],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140727"}]},"cv_name":"biological_process","definition":"The formation of heterochromatin into a heterochromatin domain by a process mediated by a small interfering siRNA.","definition_xrefs":["GOC:ha","GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory ncRNA-mediated heterochromatin formation","termid":"GO:0031048"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00058":null,"SJAG_00087":null,"SJAG_00414":null,"SJAG_00756":null,"SJAG_01008":null,"SJAG_01331":null,"SJAG_01540":null,"SJAG_01601":null,"SJAG_02119":null,"SJAG_02409":null,"SJAG_02594":null,"SJAG_02621":null,"SJAG_02725":null,"SJAG_03042":null,"SJAG_03193":null,"SJAG_03356":null,"SJAG_03680":null,"SJAG_03689":null,"SJAG_03916":null,"SJAG_04030":null,"SJAG_04061":null,"SJAG_04141":null,"SJAG_04253":null,"SJAG_04574":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0006325","GO:0010467"],"is_obsolete":false,"name":"siRNA-mediated heterochromatin formation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0141194","terms_by_termid":{"GO:0140727":null,"GO:0141194":null,"GO:1902795":null}}


id: PBO:0056759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase 14, N6-adenosine-methyltransferase subunit","termid":"PBO:0056759"}


id: PBO:0027068
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_metabolic_process","termid":"PBO:0027068"}


id: PBO:0050266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 44","termid":"PBO:0050266"}


id: PBO:0063241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin alpha 6","termid":"PBO:0063241"}


id: PR:O14362
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- smi1 gene.","definition_xrefs":["UniProtKB:O14362","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall biosynthesis/cell cycle regulator smi1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30D10.17c","synonyms":[{"name":"Spom972h-smi1","type":"exact"}],"termid":"PR:O14362"}


id: PBO:0043492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contactin 1","termid":"PBO:0043492"}


id: MONDO:0008202
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Parotidomegaly, hereditary bilateral","secondary_identifiers":["MEDGEN:401477","MESH:C566821","OMIM:168800","UMLS:C1868590"],"synonyms":[{"name":"Parotidomegaly, hereditary bilateral","type":"exact"}],"termid":"MONDO:0008202","xrefs":{"Monarch":{"xref_id":"0008202"}}}


id: PBO:0074640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 32","termid":"PBO:0074640"}


id: PBO:0090496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA pseudouridine synthase Pus4","termid":"PBO:0090496"}


id: GO:1905824
data:
  {"annotated_genes":["SJAG_01837"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118540],"is_not":false,"summary":null,"term":"GO:1905824"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitotic sister chromatid arm separation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:18765790","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mitotic sister chromatid separation","termid":"GO:1901970"},{"relation_name":"is_a","term_name":"regulation of mitotic sister chromatid arm separation","termid":"GO:1905822"},{"relation_name":"positively_regulates","term_name":"mitotic sister chromatid arm separation","termid":"GO:1990891"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01837":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of mitotic sister chromatid arm separation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of mitotic sister chromatid arm separation","type":"narrow"},{"name":"up regulation of mitotic sister chromatid arm separation","type":"exact"},{"name":"up-regulation of mitotic sister chromatid arm separation","type":"exact"},{"name":"upregulation of mitotic sister chromatid arm separation","type":"exact"}],"termid":"GO:1905824","terms_by_termid":{"GO:1905824":null}}


id: PBO:0089157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"traub family protein involved in ribosome biogenesis","termid":"PBO:0089157"}


id: FYPO:0006370
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the movement of a protein in cis and trans between heterochromatin domains occurs to a lower extent than normal in regions of subtelomeric heterochromatin.","definition_xrefs":["PMID:26438724","GO:1990707","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"},{"relation_name":"is_a","term_name":"abnormal chromatin organization during vegetative growth","termid":"FYPO:0001352"},{"relation_name":"is_a","term_name":"abnormal dynamic protein localization pattern","termid":"FYPO:0006606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0000641"],"is_obsolete":false,"name":"decreased protein exchange at subtelomeric heterochromatin","synonyms":[{"name":"decreased protein exchange at subtelomeric heterochromatin during mitotic cell cycle","type":"related"},{"name":"decreased protein exchange at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"decreased protein exchange at telomeric heterochromatin","type":"related"},{"name":"decreased protein motility on subtelomeric heterochromatin","type":"exact"},{"name":"reduced protein exchange at subtelomeric heterochromatin","type":"exact"}],"termid":"FYPO:0006370"}


id: PBO:0069617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 894, pseudogene","termid":"PBO:0069617"}


id: GO:1990068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The seed development process whose outcome is the drying of a maturing seed.","definition_xrefs":["PMID:20138563"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"},{"relation_name":"part_of","term_name":"seed maturation","termid":"GO:0010431"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"seed dehydration","termid":"GO:1990068"}


id: PR:Q10334
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glutamate-pyruvate aminotransferase AlaA that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alanine aminotransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC582.08","secondary_identifiers":["UniProtKB:Q10334"],"synonyms":[{"name":"GPT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-alaA","type":"exact"},{"name":"glutamate pyruvate transaminase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"glutamic--alanine transaminase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"glutamic--pyruvic transaminase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10334"}


id: MONDO:0006587
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete nodular nonsuppurative panniculitis (obsolete MONDO:0006587)","termid":"MONDO:0006587","xrefs":{"Monarch":{"xref_id":"0006587"}}}


id: GO:0140174
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the activity: a (2R)-2-hydroxycarboxylate + FAD + H+ = a 2-oxocarboxylate + FADH2.","definition_xrefs":["PMID:37863926","RHEA:82511"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(2R)-oxo-acid reductase activity","termid":"GO:0033719"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"(2R)-2-hydroxycarboxylate dehydrogenase activity","termid":"GO:0140174"}


id: MONDO:0009383
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary hyperbilirubinemia","termid":"MONDO:0002408"},{"relation_name":"is_a","term_name":"liver disorder","termid":"MONDO:0005154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"transient familial neonatal hyperbilirubinemia","secondary_identifiers":["OMIM:237900","UMLS:C0270210","MEDGEN:75718","Orphanet:2312","GARD:2791","MESH:C562692"],"synonyms":[{"name":"HBLRTFN","type":"related"},{"name":"Lucey-Driscoll syndrome","type":"exact"},{"name":"breast milk jaundice","type":"related"},{"name":"hyperbilirubinemia transient familial neonatal","type":"related"},{"name":"hyperbilirubinemia, familial transient neonatal","type":"exact"},{"name":"hyperbilirubinemia, transient familial neonatal","type":"related"},{"name":"transient familial hyperbilirubinemia","type":"related"}],"termid":"MONDO:0009383","xrefs":{"Monarch":{"xref_id":"0009383"}}}


id: FYPO:0007893
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which protein dephosphorylation is normal during mitotic exit (i.e. indistinguishable from wild type). Protein dephosphorylation is the removal of a phosphate group from a protein amino acid.","definition_xrefs":["PMID:12546793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein dephosphorylation during vegetative growth","termid":"FYPO:0001922"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal protein dephosphorylation during mitotic exit","termid":"FYPO:0007893"}


id: MONDO:0020729
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal agammaglobulinemia","termid":"MONDO:0011096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"autosomal recessive agammaglobulinemia 1","secondary_identifiers":["UMLS:C3152144","MEDGEN:463494","DOID:0081136","OMIM:601495"],"synonyms":[{"name":"AGM1","type":"exact"},{"name":"agammaglobulinemia 1, autosomal recessive","type":"related"},{"name":"agammaglobulinemia, autosomal recessive, due to IGHM defect","type":"related"},{"name":"autosomal recessive agammaglobulinemia 1","type":"exact"}],"termid":"MONDO:0020729","xrefs":{"Monarch":{"xref_id":"0020729"}}}


id: GO:0070765
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that has aspartic-type endopeptidase activity and contains a presenilin catalytic subunit (either PSEN1 or PSEN2), an APH1 subunit (multiple genes and splice variants exist), nicastrin (NCT), and presenilin enhancer (aka PEN-2 or Psenen), as the core complex. Variants of the complex with different subunit compositions differ in localization and specific substrates. Additionally, variants of the complex exist that contain a additional regulatory subunit as well as the four core subunits; known regulatory subunits include gamma-secretase-activating protein (aka gSAP), TMP1 (aka TMED10), and CD147 antigen (aka basigin). Gamma-secretase cleaves type I transmembrane protein substrates, including the cell surface receptor Notch and the amyloid-beta precursor protein.","definition_xrefs":["PMID:15286082","PMID:32616437","PMID:28320827","GOC:krc","PMID:25565961","PMID:15890777","PMID:17047368","PMID:22122073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"gamma-secretase complex","synonyms":[{"name":"CD147-gamma-secretase complex (APH-1a, PS-1, PEN-2, NCT variant)","type":"narrow"},{"name":"PS1 complex","type":"narrow"},{"name":"PS2 complex","type":"narrow"},{"name":"gamma-secretase complex (APH1A, PSEN1, PSENEN, NCSTN variant)","type":"narrow"},{"name":"gamma-secretase complex (APH1A, PSEN2, PSENEN, NCSTN)","type":"narrow"},{"name":"gamma-secretase complex (APH1B, PSEN1, PSENEN, NCSTN)","type":"narrow"},{"name":"gamma-secretase complex (APH1B, PSEN2, PSENEN, NCSTN)","type":"narrow"},{"name":"presenilin complex","type":"exact"}],"termid":"GO:0070765"}


id: PBO:0058783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7152","termid":"PBO:0058783"}


id: PBO:0070865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L14 pseudogene 3","termid":"PBO:0070865"}


id: PBO:0073700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SKAP1 antisense RNA 1","termid":"PBO:0073700"}


id: PBO:0049665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H19 imprinted maternally expressed transcript","termid":"PBO:0049665"}


id: MONDO:0010281
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lysosomal glycogen storage disease characterized by severe cardiomyopathy and variable degrees of muscle weakness, frequently associated with intellectual deficit.","definition_xrefs":["Orphanet:34587"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"glycogen storage disease II","termid":"MONDO:0009290"},{"relation_name":"excluded_subClassOf","term_name":"obsolete muscular glycogenosis (obsolete MONDO:0016118)","termid":"MONDO:0016118"},{"relation_name":"is_a","term_name":"disorder of glycogen metabolism","termid":"MONDO:0002412"},{"relation_name":"is_a","term_name":"lysosomal glycogen storage disease","termid":"MONDO:0017738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"Danon disease","secondary_identifiers":["MEDGEN:209235","NORD:1033","DOID:0050437","ICD9:759.89","MESH:D052120","NANDO:1200145","NANDO:1200222","OMIM:300257","EFO:1001333","icd11.foundation:1233188442","UMLS:C0878677","SCTID:419097006","GARD:9730","NCIT:C84735"],"synonyms":[{"name":"ANTOPOL disease","type":"exact"},{"name":"Antopol disease","type":"related"},{"name":"Danon disease","type":"exact"},{"name":"Danon disease, X-linked dominant","type":"exact"},{"name":"GSD IIb","type":"related"},{"name":"GSD IIb, formerly","type":"related"},{"name":"GSD due to LAMP-2 deficiency","type":"exact"},{"name":"GSD2B (formerly)","type":"related"},{"name":"LAMP2 lysosomal glycogen storage disease","type":"exact"},{"name":"X-linked vacuolar cardiomyopathy and myopathy","type":"related"},{"name":"glycogen storage cardiomyopathy","type":"related"},{"name":"glycogen storage disease IIb","type":"related"},{"name":"glycogen storage disease due to LAMP-2 deficiency","type":"related"},{"name":"glycogen storage disease limited to the heart","type":"related"},{"name":"glycogen storage disease type 2b (formerly)","type":"related"},{"name":"glycogen storage disease type IIb","type":"exact"},{"name":"glycogenosis due to LAMP-2 deficiency","type":"exact"},{"name":"lysosomal glycogen storage disease caused by mutation in LAMP2","type":"exact"},{"name":"lysosomal glycogen storage disease with normal acid maltase activity","type":"exact"},{"name":"lysosomal glycogen storage disease without acid maltase deficiency","type":"related"},{"name":"lysosomal glycogen storage disease without acid maltase deficiency (formerly)","type":"related"},{"name":"lysosomal glycogen storage disease without acid maltase deficiency, formerly","type":"related"},{"name":"pseudoglycogenosis 2","type":"related"},{"name":"pseudoglycogenosis II","type":"exact"},{"name":"vacuolar cardiomyopathy and myopathy X-linked","type":"related"},{"name":"vacuolar cardiomyopathy and myopathy, X-linked","type":"related"}],"termid":"MONDO:0010281","xrefs":{"Monarch":{"xref_id":"0010281"}}}


id: PR:O74414
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A dephospho-CoA kinase domain-containing protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04434"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C14G10.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC14G10.01","secondary_identifiers":["UniProtKB:O74414"],"synonyms":[{"name":"Spom972h-DCAKD","type":"exact"}],"termid":"PR:O74414"}


id: MONDO:0007528
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome","termid":"MONDO:0020066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ehlers-Danlos syndrome, autosomal dominant, type unspecified","secondary_identifiers":["OMIM:130090","MEDGEN:65083","MESH:C562424","UMLS:C0220679"],"synonyms":[{"name":"EDS, unspecified type","type":"related"},{"name":"Ehlers-Danlos syndrome, Friedman-Harrod type","type":"related"},{"name":"Ehlers-Danlos syndrome, autosomal dominant, type unspecified","type":"exact"}],"termid":"MONDO:0007528","xrefs":{"Monarch":{"xref_id":"0007528"}}}


id: GO:0048171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that decreases long-term neuronal synaptic plasticity, the ability of neuronal synapses to change long-term as circumstances require. Long-term neuronal synaptic plasticity generally involves increase or decrease in actual synapse numbers.","definition_xrefs":["GOC:jid","PMID:11891290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of long-term neuronal synaptic plasticity","termid":"GO:0048169"},{"relation_name":"is_a","term_name":"negative regulation of neurogenesis","termid":"GO:0050768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of long-term neuronal synaptic plasticity","synonyms":[{"name":"down regulation of long-term neuronal synaptic plasticity","type":"exact"},{"name":"down-regulation of long-term neuronal synaptic plasticity","type":"exact"},{"name":"downregulation of long-term neuronal synaptic plasticity","type":"exact"},{"name":"inhibition of long-term neuronal synaptic plasticity","type":"narrow"}],"termid":"GO:0048171"}


id: GO:1903126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of centriole-centriole cohesion.","definition_xrefs":["GOC:als","GO_REF:0000058","PMID:24554434","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"regulation of centriole-centriole cohesion","termid":"GO:0030997"},{"relation_name":"negatively_regulates","term_name":"centriole-centriole cohesion","termid":"GO:0010457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007010","GO:0007049","GO:0008150","GO:0000226"],"is_obsolete":false,"name":"negative regulation of centriole-centriole cohesion","synonyms":[{"name":"down regulation of centriole-centriole cohesion","type":"exact"},{"name":"down-regulation of centriole-centriole cohesion","type":"exact"},{"name":"downregulation of centriole-centriole cohesion","type":"exact"},{"name":"inhibition of centriole-centriole cohesion","type":"narrow"}],"termid":"GO:1903126"}


id: PBO:0063266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin beta 12","termid":"PBO:0063266"}


id: PBO:0091163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBA domain protein Dph1/Dsk2","termid":"PBO:0091163"}


id: PBO:0040780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BET1 antisense RNA 1","termid":"PBO:0040780"}


id: GO:0006398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any mRNA 3'-end processing that involves the binding to and cleavage of a stem-loop structure. For example, histone mRNAs contain a highly conserved stem-loop sequence at the 3' end of the mRNA with a 6 base pairs (bp) stem and a 4-nt loop. The mRNA is cleaved between these two elements, after the fourth or fifth nucleotide, which is typically an adenosine.","definition_xrefs":["GOC:mah","GOC:tb","PMID:17998288"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone mRNA metabolic process","termid":"GO:0008334"},{"relation_name":"is_a","term_name":"mRNA 3'-end processing","termid":"GO:0031124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0016071","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"mRNA 3'-end processing by stem-loop binding and cleavage","secondary_identifiers":["Reactome:R-HSA-77588"],"synonyms":[{"name":"histone mRNA 3' end processing","type":"narrow"}],"termid":"GO:0006398"}


id: PBO:0077270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 11","termid":"PBO:0077270"}


id: PBO:0034115
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_habitat","termid":"PBO:0034115"}


id: PBO:0049601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 4","termid":"PBO:0049601"}


id: PBO:0063712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglucomutase 5 pseudogene 1","termid":"PBO:0063712"}


id: GO:0047942
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-glutamate + ATP + ethylamine = N(5)-ethyl-L-glutamine + ADP + 2 H+ + phosphate.","definition_xrefs":["EC:6.3.1.6","RHEA:20525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-ammonia (or amide) ligase activity","termid":"GO:0016880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"glutamate-ethylamine ligase activity","secondary_identifiers":["MetaCyc:RXN-12905","KEGG_REACTION:R02929"],"synonyms":[{"name":"L-glutamate:ethylamine ligase (ADP-forming)","type":"related"},{"name":"N(5)-ethyl-L-glutamine synthetase activity","type":"related"},{"name":"N5-ethyl-L-glutamine synthetase activity","type":"related"},{"name":"N5-ethylglutamine synthetase activity","type":"related"},{"name":"theanine synthetase activity","type":"related"}],"termid":"GO:0047942"}


id: MONDO:1010323
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Entropion that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of orbital region, non-human animal","termid":"MONDO:1011315"},{"relation_name":"is_a","term_name":"disorder of visual system, non-human animal","termid":"MONDO:1011316"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"entropion, non-human animal","secondary_identifiers":["OMIA:000337"],"termid":"MONDO:1010323","xrefs":{"Monarch":{"xref_id":"1010323"}}}


id: PR:O14085
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC2F3.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14085"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocation protein sec72 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F3.02","synonyms":[{"name":"Spom972h-SPAC2F3.02","type":"exact"}],"termid":"PR:O14085"}


id: GO:0070953
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of neutrophil mediated killing of a fungal cell, the directed killing of a fungal cell by a neutrophil.","definition_xrefs":["GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neutrophil mediated killing of symbiont cell","termid":"GO:0070949"},{"relation_name":"is_a","term_name":"regulation of defense response to fungus","termid":"GO:1900150"},{"relation_name":"regulates","term_name":"neutrophil-mediated killing of fungus","termid":"GO:0070947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neutrophil mediated killing of fungus","termid":"GO:0070953"}


id: PBO:0045099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal membrane arm assembly component 1","termid":"PBO:0045099"}


id: PBO:0043547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type I alpha receptor","termid":"PBO:0043547"}


id: GO:1900122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of a protein or other molecule binding to a receptor.","definition_xrefs":["GOC:TermGenie","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein binding","termid":"GO:0032092"},{"relation_name":"is_a","term_name":"regulation of receptor binding","termid":"GO:1900120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of receptor binding","synonyms":[{"name":"activation of receptor binding","type":"narrow"},{"name":"up regulation of receptor binding","type":"exact"},{"name":"upregulation of receptor binding","type":"exact"}],"termid":"GO:1900122"}


id: PBO:0079351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TUB bipartite transcription factor","termid":"PBO:0079351"}


id: FYPO:0003787
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form mitotic spindle microtubules that are longer than normal, and extend beyond the spindle pole body. The protruding spindle microtubules are surrounded by an extension of the nuclear envelope.","definition_xrefs":["PomBase:mah","PMID:17486116"],"direct_ancestors":[{"relation_name":"has_part","term_name":"nuclear envelope protrusion present during mitosis","termid":"FYPO:0003788"},{"relation_name":"is_a","term_name":"long microtubules","termid":"FYPO:0000055"},{"relation_name":"is_a","term_name":"long mitotic spindle","termid":"FYPO:0000733"},{"relation_name":"is_a","term_name":"nuclear envelope protrusion present during mitosis","termid":"FYPO:0003788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"has_part","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002403","FYPO:0000120","FYPO:0005447","FYPO:0001985","FYPO:0000054","FYPO:0000002","FYPO:0002399","FYPO:0001320"],"is_obsolete":false,"name":"long mitotic spindle microtubules protruding beyond spindle pole body","synonyms":[{"name":"elongated mitotic spindle microtubules protruding from spindle pole body","type":"exact"},{"name":"elongated mitotic spindle microtubules protruding from spindle pole body during M-phase","type":"exact"},{"name":"long mitotic spindle microtubules protruding beyond spindle pole body, with nuclear envelope deformation","type":"related"},{"name":"long mitotic spindle microtubules protruding beyond spindle pole body, with nuclear envelope protrusion","type":"exact"},{"name":"long mitotic spindle microtubules protruding from SPB","type":"exact"},{"name":"long mitotic spindle microtubules protruding from spindle pole body during mitotic cell cycle","type":"related"},{"name":"long mitotic spindle microtubules protruding from spindle pole body during vegetative growth","type":"exact"},{"name":"long nuclear microtubules protruding through nuclear envelope","type":"related"},{"name":"mitotic spindle microtubules protruding beyond spindle pole body","type":"broad"},{"name":"nuclear envelope protrusion with long mitotic spindle microtubules protruding beyond spindle pole body","type":"exact"}],"termid":"FYPO:0003787"}


id: MONDO:0014087
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Smith-McCort dysplasia in which the cause of the disease is a mutation in the RAB33B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Smith-McCort dysplasia","termid":"MONDO:0015799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Smith-McCort dysplasia 2","secondary_identifiers":["GARD:15921","OMIM:615222","MEDGEN:811489","UMLS:C3714896","DOID:0081271"],"synonyms":[{"name":"RAB33B Smith-McCort dysplasia","type":"exact"},{"name":"SMITH-McCort dysplasia 2","type":"related"},{"name":"Smc2","type":"related"},{"name":"Smith-McCort dysplasia 2","type":"exact"},{"name":"Smith-McCort dysplasia caused by mutation in RAB33B","type":"exact"},{"name":"Smith-McCort dysplasia type 2","type":"exact"}],"termid":"MONDO:0014087","xrefs":{"Monarch":{"xref_id":"0014087"}}}


id: PBO:0052160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium inwardly rectifying channel subfamily J member 8","termid":"PBO:0052160"}


id: MONDO:0800101
data:
  {"annotated_genes":["SJAG_02889"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87409],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012056"},{"annotations":[87361],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0031007"}]},"cv_name":"mondo","definition":"A retinopathy, typically severe and early onset, caused by biallelic variants in the NMNAT1 gene. Some patients have been reported to have spondyloepiphyseal dysplasia syndrome, including sensorineural hearing loss, intellectual disability in addition to retinopathy. However, additional studies are needed to definitively describe this disease association.","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02889":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"NMNAT1-related retinopathy","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"LCA9","type":"narrow"},{"name":"Leber congenital amaurosis 9","type":"narrow"},{"name":"Leber congenital amaurosis caused by mutation in NMNAT1","type":"narrow"},{"name":"Leber congenital amaurosis type 9","type":"narrow"},{"name":"NMNAT1 Leber congenital amaurosis","type":"narrow"},{"name":"NMNAT1-related retinopathy","type":"exact"},{"name":"SHILCA","type":"narrow"},{"name":"SHILCA Syndrome","type":"narrow"},{"name":"amaurosis congenita of Leber, type 9","type":"related"},{"name":"spondyloepiphyseal dysplasia, sensorineural hearing loss, intellectual developmental disorder, and Leber congenital amaurosis","type":"narrow"}],"termid":"MONDO:0800101","terms_by_termid":{"MONDO:0012056":null,"MONDO:0031007":null},"xrefs":{"Monarch":{"xref_id":"0800101"}}}


id: MONDO:0006366
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-neoplastic polyp that arises from the stomach and is characterized by the presence of smooth muscle branching bands, and hyperplasia with cystic dilatation of the foveolar epithelium.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"Peutz-Jeghers syndrome","termid":"MONDO:0008280"},{"relation_name":"is_a","term_name":"gastric hamartomatous polyp","termid":"MONDO:0006224"},{"relation_name":"is_a","term_name":"Peutz-Jeghers polyp","termid":"MONDO:0006365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"Peutz-Jeghers polyp of the stomach","secondary_identifiers":["UMLS:C1335398","NCIT:C36205","MEDGEN:233323"],"synonyms":[{"name":"Gastric Peutz-Jeghers polyp","type":"exact"}],"termid":"MONDO:0006366","xrefs":{"Monarch":{"xref_id":"0006366"}}}


id: PBO:0052280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine demethylase 6B","termid":"PBO:0052280"}


id: PBO:0028367
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_septum","termid":"PBO:0028367"}


id: MOD:00329
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct between a glutamic acid residue and the porphyrin compound heme b, (7,12-diethenyl-3,8,13,17-tetramethylporphyrin-2,18-dipropanoato)iron.","definition_xrefs":["Unimod:436#E","PubMed:11980497","PubMed:11821421","RESID:AA0324","PubMed:11139583"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyrin modified residue","termid":"MOD:00699"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-glutamic acid residue","termid":"MOD:02068"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxyheme-L-glutamate ester","synonyms":[{"name":"5-hydroxymethyl protoporphyrin IX 5-glutamate ester","type":"exact"},{"name":"BINDING Heme (covalent; via 1 link)","type":"exact"},{"name":"Hydroxyheme","type":"related"},{"name":"[3-[(S)-(4-amino-4-carboxy)butanoyloxymethyl]-7,12-diethenyl-8,13,17-trimethyl-21H,23H-porphine-2,18-bis(2-carboxyethyl)-N21,N22,N23,N24]-ferrate","type":"exact"},{"name":"cytochrome P450 CYP4A family heme cofactor","type":"exact"},{"name":"hydroxyheme","type":"related"},{"name":"hydroxyheme-L-glutamate ester","type":"exact"}],"termid":"MOD:00329"}


id: PBO:0001607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"esterase/lipase (predicted)","termid":"PBO:0001607"}


id: PBO:0083490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene YBR301W; YBR300C is not an essential gene","termid":"PBO:0083490"}


id: PBO:0056325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP3K7 C-terminal like","termid":"PBO:0056325"}


id: MONDO:0957467
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"urogenital tuberculosis","termid":"MONDO:0006002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary genito-urinary tuberculosis","secondary_identifiers":["Orphanet:645874"],"termid":"MONDO:0957467","xrefs":{"Monarch":{"xref_id":"0957467"}}}


id: GO:0008681
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-methoxy-6-(all-trans-octaprenyl)phenol + H+ + NADPH + O2 = 2-methoxy-6-all-trans-octaprenyl-1,4-benzoquinol + H2O + NADP+.","definition_xrefs":["RHEA:29407","PMID:27822549","PMID:4572721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-octaprenyl-6-methoxyphenol hydroxylase activity","secondary_identifiers":["MetaCyc:2-OCTAPRENYL-6-METHOXYPHENOL-HYDROX-RXN"],"termid":"GO:0008681"}


id: PBO:0030966
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_trimethylation","termid":"PBO:0030966"}


id: GO:1900599
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of demethylkotanin.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"demethylkotanin metabolic process","termid":"GO:1900597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"demethylkotanin biosynthetic process","synonyms":[{"name":"demethylkotanin anabolism","type":"exact"},{"name":"demethylkotanin biosynthesis","type":"exact"},{"name":"demethylkotanin formation","type":"exact"},{"name":"demethylkotanin synthesis","type":"exact"}],"termid":"GO:1900599"}


id: PBO:0052120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily D member 3","termid":"PBO:0052120"}


id: GO:0048914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of compact myelin sheaths around the axons of the anterior lateral line nerve.","definition_xrefs":["PMID:12112375"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myelination of lateral line nerve axons","termid":"GO:0048897"},{"relation_name":"part_of","term_name":"anterior lateral line nerve glial cell morphogenesis involved in differentiation","termid":"GO:0048940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myelination of anterior lateral line nerve axons","termid":"GO:0048914"}


id: GO:0071076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The enzymatic addition of a sequence of uridylyl residues at the 3' end of an RNA molecule.","definition_xrefs":["GOC:vw","PMID:19430462"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA 3' uridylation (obsolete GO:0071076)","termid":"GO:0071076"}


id: PBO:0041291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C1s","termid":"PBO:0041291"}


id: PBO:0001881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metaxin 1 (predicted)","termid":"PBO:0001881"}


id: GO:0110044
data:
  {"annotated_genes":["SJAG_05288","SJAG_04682","SJAG_02404","SJAG_01311","SJAG_03501","SJAG_03486","SJAG_03371","SJAG_02723","SJAG_04332","SJAG_00457","SJAG_04813","SJAG_01401","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96358,103443,106749,110889],"is_not":false,"summary":null,"term":"GO:0110044"},{"annotations":[104185,107638,108483,120246,107803,111113,106264],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110045"},{"annotations":[120101,118346],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140648"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of mitotic to meiotic cell cycle switching, the process in which a cell switches cell cycle mode from mitotic to meiotic division.","definition_xrefs":["PMID:17674143","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic cell cycle","termid":"GO:0007346"},{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of meiotic cell cycle","termid":"GO:0051445"},{"relation_name":"regulates","term_name":"cell cycle switching, mitotic to meiotic cell cycle","termid":"GO:0051728"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00457":null,"SJAG_01311":null,"SJAG_01401":null,"SJAG_02404":null,"SJAG_02723":null,"SJAG_03048":null,"SJAG_03371":null,"SJAG_03486":null,"SJAG_03501":null,"SJAG_04332":null,"SJAG_04682":null,"SJAG_04813":null,"SJAG_05288":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of cell cycle switching, mitotic to meiotic cell cycle","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"sexual differentiation","type":"related"}],"termid":"GO:0110044","terms_by_termid":{"GO:0110044":null,"GO:0110045":null,"GO:0140648":null}}


id: PBO:0003343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAG family molecular chaperone regulator Bag102 (predicted)","termid":"PBO:0003343"}


id: GO:0006202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of guanosine monophosphate into other compounds, including guanine.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GMP catabolic process","termid":"GO:0046038"},{"relation_name":"is_a","term_name":"guanine metabolic process","termid":"GO:0046098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"GMP catabolic process to guanine","synonyms":[{"name":"GMP breakdown to guanine","type":"exact"},{"name":"GMP degradation to guanine","type":"exact"}],"termid":"GO:0006202"}


id: PR:Q09872
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- eti1 gene.","definition_xrefs":["UniProtKB:Q09872","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C12G12.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12G12.09","synonyms":[{"name":"Spom972h-eti1","type":"exact"}],"termid":"PR:Q09872"}


id: MONDO:0056815
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare carcinoma that arises from the intrahepatic bile ducts and is composed of malignant glandular cells and malignant squamous cells.","definition_xrefs":["NCIT:C118630"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenosquamous carcinoma","termid":"MONDO:0006074"},{"relation_name":"is_a","term_name":"squamous cell carcinoma of liver and intrahepatic biliary tract","termid":"MONDO:0018534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515","MONDO:0004992"],"is_obsolete":false,"name":"liver adenosquamous carcinoma","secondary_identifiers":["MEDGEN:858180","UMLS:C3898586"],"synonyms":[{"name":"liver adenosquamous cancer","type":"exact"},{"name":"liver adenosquamous carcinoma","type":"exact"}],"termid":"MONDO:0056815","xrefs":{"Monarch":{"xref_id":"0056815"}}}


id: GO:0033562
data:
  {"annotated_genes":["SJAG_03689","SJAG_03356","SJAG_04574","SJAG_01601","SJAG_02621"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100932,101378,112334,117843,119961],"is_not":false,"summary":null,"term":"GO:0033562"}]},"cv_name":"biological_process","definition":"A process in which the RNAi machinery mediates the degradation of nascent transcripts in association with chromatin.","definition_xrefs":["PMID:17512405","GOC:vw","GOC:mah","PMID:22431512","PMID:21151114"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory ncRNA-mediated gene silencing","termid":"GO:0031047"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01601":null,"SJAG_02621":null,"SJAG_03356":null,"SJAG_03689":null,"SJAG_04574":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"co-transcriptional gene silencing by RNA interference machinery","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RNAi-mediated CTGS","type":"exact"},{"name":"co-transcriptional gene silencing by small RNA","type":"exact"},{"name":"cotranscriptional gene silencing by RNA interference machinery","type":"related"},{"name":"cotranscriptional gene silencing by small RNA","type":"related"},{"name":"small RNA-mediated cotranscriptional gene silencing","type":"exact"}],"termid":"GO:0033562","terms_by_termid":{"GO:0033562":null}}


id: PBO:0029903
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-haploproficient","termid":"PBO:0029903"}


id: PBO:0076531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 45","termid":"PBO:0076531"}


id: _global:go_annotation_extension_relation
data:
  {"annotation_feature_type":"gene","cv_name":"external","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"go_annotation_extension_relation","secondary_identifiers":["GOREL:0000000"],"termid":"_global:go_annotation_extension_relation"}


id: GO:0047415
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(2)-benzoyl-D-arginine-4-nitroanilide + H2O = 4-nitroaniline + N(2)-benzoyl-D-arginine + H+.","definition_xrefs":["EC:3.5.1.72","RHEA:14421"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016810"],"is_obsolete":false,"name":"D-benzoylarginine-4-nitroanilide amidase activity","secondary_identifiers":["KEGG_REACTION:R04113","MetaCyc:3.5.1.72-RXN"],"synonyms":[{"name":"D-BAPA-ase activity","type":"related"},{"name":"N-benzoyl-D-arginine-4-nitroanilide amidohydrolase activity","type":"related"},{"name":"benzoyl-D-arginine arylamidase activity","type":"related"}],"termid":"GO:0047415"}


id: MONDO:1010269
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypospadias that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis, non-human animal","termid":"MONDO:1011313"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"reproductive system disorder, non-human animal","termid":"MONDO:1011354"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypospadias, non-human animal","secondary_identifiers":["OMIA:001187"],"termid":"MONDO:1010269","xrefs":{"Monarch":{"xref_id":"1010269"}}}


id: GO:0102967
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (6E)-8-hydroxygeraniol + NADP = (6E)-8-hydroxygeranial + NADPH + H+.","definition_xrefs":["RHEA:32607","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"10-hydroxygeraniol oxidoreductase activity","secondary_identifiers":["MetaCyc:RXN-9367"],"termid":"GO:0102967"}


id: GO:1902047
data:
  {"annotated_genes":["SJAG_02059","SJAG_02125","SJAG_04134","SJAG_02060","SJAG_04469","SJAG_02344","SJAG_03817"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104425],"is_not":false,"summary":null,"term":"GO:1902047"},{"annotations":[108226],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902267"},{"annotations":[70461,70558,62414,62438,58059],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903711"},{"annotations":[62413,70557,62437,70460],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903710"}]},"cv_name":"biological_process","definition":"The process in which a polyamine macromolecule is transported across a membrane.","definition_xrefs":["GOC:TermGenie","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine transport","termid":"GO:0015846"},{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":7,"genes_by_uniquename":{"SJAG_02059":null,"SJAG_02060":null,"SJAG_02125":null,"SJAG_02344":null,"SJAG_03817":null,"SJAG_04134":null,"SJAG_04469":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"polyamine transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:1905122"],"synonyms":[{"name":"polyamine import","type":"related"},{"name":"polyamine uptake","type":"related"}],"termid":"GO:1902047","terms_by_termid":{"GO:1902047":null,"GO:1902267":null,"GO:1903710":null,"GO:1903711":null}}


id: FYPO:0002493
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of DNA 5'-adenosine monophosphate hydrolase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA 5'-adenosine monophosphate hydrolase activity","termid":"FYPO:0002491"},{"relation_name":"is_a","term_name":"decreased nuclease activity","termid":"FYPO:0004253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0005447","FYPO:0000652","FYPO:0000661","FYPO:0000002","FYPO:0000707"],"is_obsolete":false,"name":"decreased DNA 5'-adenosine monophosphate hydrolase activity","synonyms":[{"name":"reduced DNA 5'-adenosine monophosphate hydrolase activity","type":"exact"}],"termid":"FYPO:0002493"}


id: PBO:0079957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP7 antisense RNA 1","termid":"PBO:0079957"}


id: MONDO:0012538
data:
  {"annotated_genes":["SJAG_03025"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87650],"is_not":false,"summary":null,"term":"MONDO:0012538"}]},"cv_name":"mondo","definition":"Any nemaline myopathy in which the cause of the disease is a mutation in the CFL2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"typical nemaline myopathy","termid":"MONDO:0015737"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03025":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"nemaline myopathy 7","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:610687","DOID:0110934","GARD:15493","MEDGEN:343979","MESH:C565198","UMLS:C1853154"],"synonyms":[{"name":"CFL2 nemaline myopathy","type":"exact"},{"name":"NEM7","type":"exact"},{"name":"nemaline myopathy 7","type":"exact"},{"name":"nemaline myopathy 7, autosomal recessive","type":"exact"},{"name":"nemaline myopathy caused by mutation in CFL2","type":"exact"},{"name":"nemaline myopathy type 7","type":"exact"}],"termid":"MONDO:0012538","terms_by_termid":{"MONDO:0012538":null},"xrefs":{"Monarch":{"xref_id":"0012538"}}}


id: PBO:0073828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 7 member 5 pseudogene 2","termid":"PBO:0073828"}


id: MONDO:0009768
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive form of oculodentodigital dysplasia.","definition_xrefs":["MONDO:patterns/autosomal_recessive"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"oculodentodigital dysplasia","termid":"MONDO:0008111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005093","MONDO:0006025"],"is_obsolete":false,"name":"oculodentodigital dysplasia, autosomal recessive","secondary_identifiers":["MEDGEN:412708","GARD:15213","OMIM:257850","UMLS:C2749477","MESH:C567605"],"synonyms":[{"name":"ODDD, autosomal recessive","type":"related"},{"name":"ODOD recessive","type":"related"},{"name":"ODOD, autosomal recessive","type":"related"},{"name":"autosomal recessive oculodentodigital dysplasia","type":"exact"},{"name":"oculodentodigital dysplasia, autosomal recessive","type":"exact"},{"name":"oculodentoosseous dysplasia recessive","type":"related"},{"name":"oculodentoosseous dysplasia, autosomal recessive","type":"related"}],"termid":"MONDO:0009768","xrefs":{"Monarch":{"xref_id":"0009768"}}}


id: PBO:0061208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nodal growth differentiation factor","termid":"PBO:0061208"}


id: PBO:0073389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SETD4 antisense RNA 1","termid":"PBO:0073389"}


id: PBO:0015703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane transmembrane transport regulator (predicted)","termid":"PBO:0015703"}


id: MONDO:0019180
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder of angiogenesis leading to arteriovenous dilatations: cutaneo-mucosal hemorrhagic telangiectasias and visceral shunting.","definition_xrefs":["Orphanet:774"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skin vascular disease","termid":"MONDO:0019293"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"telangiectasis","termid":"MONDO:0001576"},{"relation_name":"is_a","term_name":"capillary malformation","termid":"MONDO:0016231"},{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"hereditary hemorrhagic telangiectasia","secondary_identifiers":["GARD:6626","OMIMPS:187300","NANDO:2100296","NANDO:2201034","UMLS:C0039445","NANDO:1200744","MESH:D013683","ICD10CM:I78.0","icd11.foundation:714406192","MEDGEN:52657","SCTID:21877004","ICD9:448.0","DOID:1270","MedDRA:10019883","NORD:1229","NCIT:C35064"],"synonyms":[{"name":"HHT","type":"exact"},{"name":"Osler hemorrhagic telangiectasia syndrome","type":"exact"},{"name":"Osler-Weber-Rendu disease","type":"exact"},{"name":"Rendu-Osler disease","type":"exact"},{"name":"Rendu-Osler-Weber disease","type":"exact"},{"name":"hereditary hemorrhagic telangiectasia","type":"exact"},{"name":"telangiectasia, hereditary Hemorrahagic, of Rendu, Osler","type":"exact"},{"name":"telangiectasia, hereditary hemorrhagic","type":"exact"}],"termid":"MONDO:0019180","xrefs":{"Monarch":{"xref_id":"0019180"}}}


id: PBO:0066470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rieske Fe-S domain containing","termid":"PBO:0066470"}


id: PBO:0056770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase 21C, AARS1 lysine","termid":"PBO:0056770"}


id: MONDO:0019323
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pemphigus erythematosus is a rare superficial pemphigus disease characterized clinically by well-demarcated, localized, erythematous, scaly, hyperkeratotic, crusted plaques, with frequent butterfly distribution over the malar area of the face (but also commonly involving trunk and scalp, and less frequently the extremities, with a photoexposed distribution). Histologically, granular deposits along the dermal-epidermal junction, in addition to intercellular deposition in the upper epidermis, are observed.","definition_xrefs":["Orphanet:79480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pemphigus","termid":"MONDO:0006594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"pemphigus erythematosus","secondary_identifiers":["GARD:19022","icd11.foundation:399813106","MedDRA:10058917","SCTID:36739006","MEDGEN:537812","EFO:0008603","ICD10CM:L10.4","NANDO:1200233","UMLS:C0263312"],"synonyms":[{"name":"Senear-Usher syndrome","type":"exact"},{"name":"seborrheic pemphigus","type":"exact"}],"termid":"MONDO:0019323","xrefs":{"Monarch":{"xref_id":"0019323"}}}


id: PBO:0035822
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_methylation_at_heterochromatin_island_during_vegetative_growth","termid":"PBO:0035822"}


id: PBO:0074177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 37 member 4","termid":"PBO:0074177"}


id: PBO:0059126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macrophage expressed 1","termid":"PBO:0059126"}


id: MONDO:0000919
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm involving the ampulla of Vater.","definition_xrefs":["NCIT:C3536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"duodenum cancer","termid":"MONDO:0000920"},{"relation_name":"is_a","term_name":"ampulla of vater neoplasm","termid":"MONDO:0000921"},{"relation_name":"is_a","term_name":"malignant tumor of extrahepatic bile duct","termid":"MONDO:0021321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"ampulla of vater cancer","secondary_identifiers":["SCTID:363417006","DOID:10020","ICD10CM:C24.1","MEDGEN:57785","UMLS:C0153454","ICD9:156.2"],"synonyms":[{"name":"cancer of hepatopancreatic ampulla","type":"exact"},{"name":"hepatopancreatic ampulla cancer","type":"exact"},{"name":"malignant ampulla of Vater neoplasm","type":"exact"},{"name":"malignant ampulla of Vater tumor","type":"exact"},{"name":"malignant ampulla of Vater tumour","type":"exact"},{"name":"malignant hepatopancreatic ampulla neoplasm","type":"exact"},{"name":"malignant neoplasm of ampulla of Vater","type":"exact"},{"name":"malignant neoplasm of hepatopancreatic ampulla","type":"exact"},{"name":"malignant neoplasm of the ampulla of Vater","type":"exact"},{"name":"malignant tumor of ampulla of Vater","type":"exact"},{"name":"malignant tumor of ampulla of vater","type":"exact"},{"name":"malignant tumor of the ampulla of Vater","type":"exact"},{"name":"malignant tumour of ampulla of Vater","type":"exact"},{"name":"malignant tumour of ampulla of vater","type":"exact"},{"name":"malignant tumour of the ampulla of Vater","type":"exact"}],"termid":"MONDO:0000919","xrefs":{"Monarch":{"xref_id":"0000919"}}}


id: GO:1900937
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of nonadec-1-ene biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of olefin biosynthetic process","termid":"GO:1900913"},{"relation_name":"is_a","term_name":"positive regulation of nonadec-1-ene metabolic process","termid":"GO:1900934"},{"relation_name":"is_a","term_name":"regulation of nonadec-1-ene biosynthetic process","termid":"GO:1900935"},{"relation_name":"positively_regulates","term_name":"nonadec-1-ene biosynthetic process","termid":"GO:1900877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of nonadec-1-ene biosynthetic process","synonyms":[{"name":"activation of nonadec-1-ene anabolism","type":"exact"},{"name":"activation of nonadec-1-ene biosynthesis","type":"exact"},{"name":"activation of nonadec-1-ene biosynthetic process","type":"narrow"},{"name":"activation of nonadec-1-ene formation","type":"exact"},{"name":"activation of nonadec-1-ene synthesis","type":"exact"},{"name":"positive regulation of nonadec-1-ene anabolism","type":"exact"},{"name":"positive regulation of nonadec-1-ene biosynthesis","type":"exact"},{"name":"positive regulation of nonadec-1-ene formation","type":"exact"},{"name":"positive regulation of nonadec-1-ene synthesis","type":"exact"},{"name":"up regulation of nonadec-1-ene anabolism","type":"exact"},{"name":"up regulation of nonadec-1-ene biosynthesis","type":"exact"},{"name":"up regulation of nonadec-1-ene biosynthetic process","type":"exact"},{"name":"up regulation of nonadec-1-ene formation","type":"exact"},{"name":"up regulation of nonadec-1-ene synthesis","type":"exact"},{"name":"up-regulation of nonadec-1-ene anabolism","type":"exact"},{"name":"up-regulation of nonadec-1-ene biosynthesis","type":"exact"},{"name":"up-regulation of nonadec-1-ene biosynthetic process","type":"exact"},{"name":"up-regulation of nonadec-1-ene formation","type":"exact"},{"name":"up-regulation of nonadec-1-ene synthesis","type":"exact"},{"name":"upregulation of nonadec-1-ene anabolism","type":"exact"},{"name":"upregulation of nonadec-1-ene biosynthesis","type":"exact"},{"name":"upregulation of nonadec-1-ene biosynthetic process","type":"exact"},{"name":"upregulation of nonadec-1-ene formation","type":"exact"},{"name":"upregulation of nonadec-1-ene synthesis","type":"exact"}],"termid":"GO:1900937"}


id: SOFP:finished
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"If the annotation of the feature is complete","definition_xrefs":["so:sjc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"finished","termid":"SOFP:finished"}


id: PBO:0028607
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_serine_phosphorylation_during_vegetative_growth","termid":"PBO:0028607"}


id: PBO:0088888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic methionine-tRNA ligase Mrs1","termid":"PBO:0088888"}


id: PBO:0113055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of ESCRT-II complex; contains GLUE (GRAM Like Ubiquitin binding in EAP45) domain which is involved in interactions with ESCRT-I and ubiquitin-dependent sorting of proteins into endosome; plays role in lager yeast flocculation under brewing conditions; plays role in formation of mutant huntingtin (Htt) aggregates in yeast","termid":"PBO:0113055"}


id: PBO:0081859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 791","termid":"PBO:0081859"}


id: PBO:0049552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 14","termid":"PBO:0049552"}


id: GO:0000783
data:
  {"annotated_genes":["SJAG_02194","SJAG_02362","SJAG_04245","SJAG_03092","SJAG_01378","SJAG_03685","SJAG_01864","SJAG_01777"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[112218,64279],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990879"},{"annotations":[81600,96904,101537,117801,93654,91579],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070187"}]},"cv_name":"cellular_component","definition":"A complex of DNA and protein located at the end of a linear chromosome in the nucleus that protects and stabilizes a linear chromosome.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomere cap complex","termid":"GO:0000782"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01378":null,"SJAG_01777":null,"SJAG_01864":null,"SJAG_02194":null,"SJAG_02362":null,"SJAG_03092":null,"SJAG_03685":null,"SJAG_04245":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005694","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"nuclear telomere cap complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0000783","terms_by_termid":{"GO:0070187":null,"GO:1990879":null}}


id: PBO:0112851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asynchronous replication autosomal RNA 15-1","termid":"PBO:0112851"}


id: PBO:0027419
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_Golgi_apparatus,_with_protein_mislocalized_to_endoplasmic_reticulum","termid":"PBO:0027419"}


id: MONDO:0019216
data:
  {"annotated_genes":["SJAG_01851","SJAG_04157","SJAG_01152","SJAG_02163","SJAG_02955","SJAG_00531","SJAG_03795","SJAG_03400","SJAG_01298","SJAG_04637","SJAG_03827","SJAG_01059","SJAG_03375","SJAG_01422","SJAG_04334","SJAG_02084","SJAG_03592","SJAG_04296","SJAG_02848","SJAG_01526","SJAG_00643","SJAG_03557","SJAG_05342","SJAG_04495","SJAG_01634","SJAG_02384","SJAG_04529","SJAG_02946","SJAG_02180","SJAG_01797","SJAG_02712","SJAG_01998","SJAG_02295","SJAG_02947","SJAG_04497","SJAG_02150"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88178],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014392"},{"annotations":[87040],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014593"},{"annotations":[87050,87051],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014598"},{"annotations":[87013,87012,87014],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014625"},{"annotations":[88967],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014933"},{"annotations":[88014],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009448"},{"annotations":[89039],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010645"},{"annotations":[88113],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008379"},{"annotations":[87862],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010828"},{"annotations":[88002],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010806"},{"annotations":[87918],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011075"},{"annotations":[88995],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010723"},{"annotations":[88467],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012363"},{"annotations":[86836],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012477"},{"annotations":[88552],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013468"},{"annotations":[87249],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013516"},{"annotations":[87629,87630],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013611"},{"annotations":[87613],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014256"},{"annotations":[88385,88387,88384,88389,88383,88382,88381,88386,88388],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014323"},{"annotations":[88066],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014400"},{"annotations":[88631],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015013"},{"annotations":[88506,88505],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044320"},{"annotations":[88028],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032604"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"inborn 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id: PBO:0072343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 29","termid":"PBO:0072343"}


id: MONDO:0007291
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete familial cerebral cavernous malformation (obsolete MONDO:0007291)","termid":"MONDO:0007291","xrefs":{"Monarch":{"xref_id":"0007291"}}}


id: GO:0140906
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: R-CH + a halogen + oxygen donor = R-C-halogen +H2O.","definition_xrefs":["PMID:28466644","PMID:34368824"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"halogenase activity","termid":"GO:0140906"}


id: PBO:0089106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic tryptophan-tRNA ligase Wrs1","termid":"PBO:0089106"}


id: PBO:0027093
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_rDNA_copy_number","termid":"PBO:0027093"}


id: MONDO:1011090
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Renal dysplasia that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal dysplasia, non-human animal","termid":"MONDO:1010268"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"renal dysplasia, cattle","secondary_identifiers":["OMIA:001135-9913"],"termid":"MONDO:1011090","xrefs":{"Monarch":{"xref_id":"1011090"}}}


id: PBO:0043308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride intracellular channel 1 pseudogene 1","termid":"PBO:0043308"}


id: GO:1903294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glutamate secretion, neurotransmission.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:16782817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glutamate secretion","termid":"GO:0014048"},{"relation_name":"is_a","term_name":"regulation of neurotransmitter secretion","termid":"GO:0046928"},{"relation_name":"is_a","term_name":"regulation of synaptic transmission, glutamatergic","termid":"GO:0051966"},{"relation_name":"regulates","term_name":"glutamate secretion, neurotransmission","termid":"GO:0061535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of glutamate secretion, neurotransmission","termid":"GO:1903294"}


id: GO:0004626
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a fatty acid anion.","definition_xrefs":["EC:3.1.1.4"],"gene_count":0,"genotype_count":0,"name":"obsolete cytosolic phospholipase A2 activity (obsolete GO:0004626)","synonyms":[{"name":"cytosolic phospholipase A2 activity","type":"exact"}],"termid":"GO:0004626"}


id: MONDO:0008741
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"PAGOD syndrome is a severe developmental syndrome characterized by multiple congenital anomalies including cardiovascular defects, pulmonary hypoplasia, diaphragmatic defects and genital anomalies.","definition_xrefs":["Orphanet:991"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"46,XY disorder of sex development","termid":"MONDO:0020040"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAGOD syndrome","secondary_identifiers":["UMLS:C1859967","MESH:C537018","MEDGEN:347985","OMIM:202660","SCTID:722132007","GARD:3086"],"synonyms":[{"name":"Kennerknecht sorgo Oberhoffer syndrome","type":"related"},{"name":"PAGOD syndrome","type":"exact"},{"name":"agonadism with multiple internal malformations","type":"related"},{"name":"pulmonary hypoplasia, hypoplasia of the pulmonary artery, agonadism, omphalocele-diaphragmatic defect, and dextrocardia","type":"related"},{"name":"pulmonary hypoplasia-agonadism-dextrocardia-diaphragmatic hernia syndrome","type":"exact"}],"termid":"MONDO:0008741","xrefs":{"Monarch":{"xref_id":"0008741"}}}


id: MONDO:0006006
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well differentiated squamous cell carcinoma characterized by a papillary growth pattern, acanthosis, mild cytologic atypia, and pushing tumor margins. The most commonly affected anatomic sites are the oral cavity, nasal cavity, larynx, esophagus, anus, vagina, vulva, and the plantar region of the foot.","definition_xrefs":["NCIT:C3781"],"direct_ancestors":[{"relation_name":"is_a","term_name":"papillary squamous carcinoma","termid":"MONDO:0002979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"verrucous carcinoma","secondary_identifiers":["EFO:0007535","SCTID:403904009","UMLS:C0206706","MEDGEN:60213","DOID:3737","ICDO:8051/3","MESH:D018289","ICD9:199.1"],"synonyms":[{"name":"verrucous carcinoma","type":"exact"},{"name":"verrucous carcinoma NOS (morphologic abnormality)","type":"exact"},{"name":"verrucous epidermoid carcinoma","type":"exact"},{"name":"verrucous epidermoid cell carcinoma","type":"exact"},{"name":"verrucous squamous carcinoma","type":"exact"},{"name":"verrucous squamous cell carcinoma","type":"exact"},{"name":"warty carcinoma","type":"related"}],"termid":"MONDO:0006006","xrefs":{"Monarch":{"xref_id":"0006006"}}}


id: GO:0002860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of natural killer cell mediated cytotoxicity directed against tumor cell target.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of natural killer cell mediated immune response to tumor cell","termid":"GO:0002857"},{"relation_name":"is_a","term_name":"regulation of natural killer cell mediated cytotoxicity directed against tumor cell target","termid":"GO:0002858"},{"relation_name":"is_a","term_name":"positive regulation of natural killer cell mediated cytotoxicity","termid":"GO:0045954"},{"relation_name":"positively_regulates","term_name":"natural killer cell mediated cytotoxicity directed against tumor cell target","termid":"GO:0002420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of natural killer cell mediated cytotoxicity directed against tumor cell target","synonyms":[{"name":"activation of natural killer cell mediated cytotoxicity directed against tumor cell target","type":"narrow"},{"name":"stimulation of natural killer cell mediated cytotoxicity directed against tumor cell target","type":"narrow"},{"name":"up regulation of natural killer cell mediated cytotoxicity directed against tumor cell target","type":"exact"},{"name":"up-regulation of natural killer cell mediated cytotoxicity directed against tumor cell target","type":"exact"},{"name":"upregulation of natural killer cell mediated cytotoxicity directed against tumor cell target","type":"exact"}],"termid":"GO:0002860"}


id: PBO:0065739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal membrane protein 4","termid":"PBO:0065739"}


id: PBO:0024802
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_part_structure_that_is_capable_of","termid":"PBO:0024802"}


id: GO:0060841
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the venous blood vessel over time from its initial formation to the mature structure. Venous blood vessels carry blood back to the heart after the capillary bed.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel development","termid":"GO:0001568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"venous blood vessel development","termid":"GO:0060841"}


id: GO:1903320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein modification by small protein conjugation or removal.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of post-translational protein modification","termid":"GO:1901873"},{"relation_name":"regulates","term_name":"protein modification by small protein conjugation or removal","termid":"GO:0070647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"regulation of protein modification by small protein conjugation or removal","termid":"GO:1903320"}


id: GO:0001726
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork.","definition_xrefs":["ISBN:0124325653"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection","termid":"GO:0120025"},{"relation_name":"part_of","term_name":"cell leading edge","termid":"GO:0031252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ruffle","synonyms":[{"name":"membrane ruffle","type":"related"}],"termid":"GO:0001726"}


id: MONDO:0024285
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"heavy chain disease","termid":"MONDO:0019464"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"epsilon-heavy chain disease","secondary_identifiers":["ICD9:273.2","SCTID:60620005","MEDGEN:543922","UMLS:C0272254"],"synonyms":[{"name":"IgE heavy chain disease","type":"related"}],"termid":"MONDO:0024285","xrefs":{"Monarch":{"xref_id":"0024285"}}}


id: PBO:0041750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAMTA2 antisense RNA 1","termid":"PBO:0041750"}


id: GO:1900151
data:
  {"annotated_genes":["SJAG_02370"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93489],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060212"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay.","definition_xrefs":["GOC:mcc","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA stability","termid":"GO:0043488"},{"relation_name":"regulates","term_name":"nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay","termid":"GO:0000288"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02370":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0016071","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of deadenylation-dependent mRNA decay","type":"exact"},{"name":"regulation of mRNA breakdown, deadenylation-dependent decay","type":"exact"},{"name":"regulation of mRNA catabolic process, deadenylation-dependent","type":"exact"},{"name":"regulation of mRNA catabolic process, deadenylylation-dependent","type":"exact"},{"name":"regulation of mRNA catabolism, deadenylation-dependent","type":"exact"},{"name":"regulation of mRNA catabolism, deadenylylation-dependent","type":"exact"},{"name":"regulation of mRNA degradation, deadenylation-dependent decay","type":"exact"},{"name":"regulation of nuclear mRNA catabolic process, deadenylation-dependent decay","type":"exact"}],"termid":"GO:1900151","terms_by_termid":{"GO:0060212":null}}


id: PBO:0081414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 267","termid":"PBO:0081414"}


id: PBO:0069067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 314, pseudogene","termid":"PBO:0069067"}


id: GO:0019461
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of glutamine into fumarate, beginning with the conversion of glutamine to glutamate catalyzed by the enzyme glutamate synthase (NADPH) (EC:1.4.1.13).","definition_xrefs":["GOC:bf","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete glutamine catabolic process to fumarate, using glutamate synthase (NADPH) (obsolete GO:0019461)","synonyms":[{"name":"glutamate catabolic process to fumarate, using glutamate synthase (NADPH)","type":"related"},{"name":"glutamine breakdown to fumarate, using glutamate synthase (NADPH)","type":"exact"},{"name":"glutamine degradation to fumarate, using glutamate synthase (NADPH)","type":"exact"}],"termid":"GO:0019461"}


id: GO:1904544
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of free ubiquitin chain polymerization.","definition_xrefs":["GO_REF:0000058","PMID:24660806","GOC:PARL","GOC:pad","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein polymerization","termid":"GO:0032273"},{"relation_name":"is_a","term_name":"regulation of free ubiquitin chain polymerization","termid":"GO:1904542"},{"relation_name":"positively_regulates","term_name":"free ubiquitin chain polymerization","termid":"GO:0010994"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of free ubiquitin chain polymerization","synonyms":[{"name":"activation of free ubiquitin chain polymerization","type":"narrow"},{"name":"up regulation of free ubiquitin chain polymerization","type":"exact"},{"name":"up-regulation of free ubiquitin chain polymerization","type":"exact"},{"name":"upregulation of free ubiquitin chain polymerization","type":"exact"}],"termid":"GO:1904544"}


id: PR:P41892
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cdc7 gene.","definition_xrefs":["UniProtKB:P41892","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division control protein 7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21.06c","synonyms":[{"name":"Spom972h-cdc7","type":"exact"}],"termid":"PR:P41892"}


id: PBO:0057396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548f-4","termid":"PBO:0057396"}


id: PBO:0069997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1292, pseudogene","termid":"PBO:0069997"}


id: GO:0045900
data:
  {"annotated_genes":["SJAG_05000"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77097],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001125"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of translational elongation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translational elongation","termid":"GO:0006448"},{"relation_name":"is_a","term_name":"negative regulation of translation","termid":"GO:0017148"},{"relation_name":"negatively_regulates","term_name":"translational elongation","termid":"GO:0006414"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of translational elongation","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"down regulation of translational elongation","type":"exact"},{"name":"down-regulation of translational elongation","type":"exact"},{"name":"downregulation of translational elongation","type":"exact"},{"name":"inhibition of translational elongation","type":"narrow"}],"termid":"GO:0045900","terms_by_termid":{"GO:2001125":null}}


id: PBO:0043147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 15","termid":"PBO:0043147"}


id: PBO:0060020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 8","termid":"PBO:0060020"}


id: PBO:0077892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TP53RK binding protein pseudogene 1","termid":"PBO:0077892"}


id: PBO:0086500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative plasma membrane sensor; involved in cell integrity signaling and stress response during glucose starvation and oxidative stress; has structural and functional similarity to Mid2p; MTL1 has a paralog, MID2, that arose from the whole genome duplication","termid":"PBO:0086500"}


id: SO:1000184
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant affecting splicing and causes an exon loss.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000184 sequence_variant_causes_exon_loss (obsolete SO:1000184)","synonyms":[{"name":"mutation causes exon loss","type":"related"},{"name":"sequence variant causes exon loss","type":"exact"}],"termid":"SO:1000184"}


id: PBO:0009641
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.2.-.-","termid":"PBO:0009641"}


id: FYPO:0000614
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of progression through S phase of the mitotic cell cycle is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic S phase progression","termid":"FYPO:0000610"},{"relation_name":"is_a","term_name":"increased duration of mitotic cell cycle phase","termid":"FYPO:0001069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000631"],"is_obsolete":false,"name":"increased duration of mitotic S phase","secondary_identifiers":["FYPO:0000612","FYPO:0000613"],"synonyms":[{"name":"decreased rate of mitotic S phase progression","type":"related"},{"name":"delayed mitotic S phase progression","type":"related"},{"name":"delayed mitotic S phase progression during vegetative growth","type":"related"},{"name":"increased S phase index","type":"related"},{"name":"increased duration of S phase during mitotic cell cycle","type":"exact"},{"name":"increased duration of mitotic S phase during vegetative growth","type":"exact"},{"name":"mitotic cell cycle progression in S phase: decreased rate","type":"related"},{"name":"mitotic cell cycle progression in S phase: delayed","type":"related"},{"name":"mitotic cell cycle progression in S phase: increased duration","type":"related"},{"name":"prolonged mitotic S phase","type":"exact"},{"name":"reduced rate of mitotic S phase progression","type":"related"}],"termid":"FYPO:0000614"}


id: PATO:0002356
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a physical object that has been constantly realizing some of its functions.","definition_xrefs":["PATOC:RH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"active","termid":"PATO:0002354"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"constitutively active","termid":"PATO:0002356"}


id: PBO:0065975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD54 like 2","termid":"PBO:0065975"}


id: MONDO:0014821
data:
  {"annotated_genes":["SJAG_00893"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87611],"is_not":false,"summary":null,"term":"MONDO:0014821"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with decreased bone density (obsolete MONDO:0019704)","termid":"MONDO:0019704"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00893":null},"genotype_count":0,"is_obsolete":false,"name":"complex lethal osteochondrodysplasia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:17807","MEDGEN:900688","Orphanet:457378","UMLS:C4225162","OMIM:616897"],"synonyms":[{"name":"Complex lethal osteochondrodysplasia, Symoens-Barnes-Gistelinck type","type":"exact"},{"name":"OCLSBG","type":"related"},{"name":"osteochondrodysplasia, COMPLEX lethal, Symoens-Barnes-Gistelinck type","type":"related"},{"name":"osteochondrodysplasia, Complex lethal, Symoens-Barnes-Gistelinck type","type":"related"}],"termid":"MONDO:0014821","terms_by_termid":{"MONDO:0014821":null},"xrefs":{"Monarch":{"xref_id":"0014821"}}}


id: PBO:0004991
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.11.1.6","termid":"PBO:0004991"}


id: PBO:0080868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YJU2 splicing factor homolog","termid":"PBO:0080868"}


id: MONDO:0006973
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma arising from the sebaceous glands, sweat glands, or the hair follicles. Representative examples include sebaceous carcinoma, apocrine carcinoma, eccrine carcinoma, and pilomatrical carcinoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermal appendage tumor","termid":"MONDO:0002297"},{"relation_name":"is_a","term_name":"skin carcinoma","termid":"MONDO:0002656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"skin appendage carcinoma","secondary_identifiers":["NCIT:C3775","EFO:1001183","UMLS:C0206697","MedDRA:10040798","MEDGEN:60209","ONCOTREE:SKAC","ICDO:8390/3","MESH:D018280"],"synonyms":[{"name":"adnexal carcinoma","type":"exact"},{"name":"carcinoma of adnexa","type":"exact"},{"name":"carcinoma of cutaneous appendage","type":"exact"},{"name":"carcinoma of skin appendage","type":"exact"},{"name":"carcinoma, adnexal, malignant","type":"exact"},{"name":"cutaneous appendage carcinoma","type":"exact"},{"name":"skin adnexal carcinoma","type":"related"},{"name":"skin appendage carcinoma","type":"exact"}],"termid":"MONDO:0006973","xrefs":{"Monarch":{"xref_id":"0006973"}}}


id: FYPO:0008351
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of AMP 5'-nucleotidase activity is abolished.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal 5'-nucleotidase activity","termid":"FYPO:0008349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000661","FYPO:0000654","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"abolished AMP 5'-nucleotidase activity","termid":"FYPO:0008351"}


id: GO:0035845
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level and results in the assembly, arrangement of constituent parts, or disassembly of the outer segment of a photoreceptor cell, a sensory cell that reacts to the presence of light. The outer segment of the photoreceptor cell contains the light-absorbing materials.","definition_xrefs":["PMID:14507858","ISBN:0824072820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"},{"relation_name":"part_of","term_name":"photoreceptor cell development","termid":"GO:0042461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"photoreceptor cell outer segment organization","synonyms":[{"name":"photoreceptor cell outer segment organisation","type":"exact"},{"name":"photoreceptor outer segment organization","type":"exact"}],"termid":"GO:0035845"}


id: PBO:0004283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear export factor (predicted)","termid":"PBO:0004283"}


id: PBO:0065830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB6D, member RAS oncogene family","termid":"PBO:0065830"}


id: PBO:0038778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activin A receptor type 1C","termid":"PBO:0038778"}


id: GO:0008802
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: betaine aldehyde + NAD+ + H2O = betaine + NADH + H+.","definition_xrefs":["EC:1.2.1.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase (NAD+) activity","termid":"GO:0004029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"betaine-aldehyde dehydrogenase (NAD+) activity","secondary_identifiers":["Reactome:R-HSA-6797955","MetaCyc:BADH-RXN","RHEA:15305"],"synonyms":[{"name":"BADH activity","type":"related"},{"name":"BetB","type":"related"},{"name":"betaine aldehyde dehydrogenase activity","type":"related"},{"name":"betaine aldehyde oxidase activity","type":"related"},{"name":"betaine-aldehyde:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0008802"}


id: MONDO:0017785
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"PENS syndrome is a rare, genetic, neurocutaneous syndrome characterized by the presence of randomly distributed, small, white to yellowish, multiple, rounded or irregular polycyclically-shaped, epidermal keratotic papules and plaques of ''gem-like'' appearance with a rough surface, typically located on the trunk and proximal limbs, associated with variable neurological abnormalities, including psychomotor delay, epilepsy, speech and language impairment and attention deficit-hyperactivity disorder. Clumsiness, dyslexia and oftalmological abnormalities have also been reported.","definition_xrefs":["Orphanet:313936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanocytic nevus","termid":"MONDO:0005073"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"PENS syndrome","secondary_identifiers":["MEDGEN:1654469","GARD:13447","UMLS:C4749916"],"synonyms":[{"name":"papular epidermal nevi with skyline basal cell layers syndrome","type":"exact"}],"termid":"MONDO:0017785","xrefs":{"Monarch":{"xref_id":"0017785"}}}


id: MONDO:0018581
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"stiff-person syndrome","termid":"MONDO:0008491"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progressive encephalomyelitis with rigidity and myoclonus","secondary_identifiers":["UMLS:C1861457","MEDGEN:349287","GARD:13110","Orphanet:438266"],"synonyms":[{"name":"PERM","type":"exact"},{"name":"progressive encephalomyelitis with rigidity","type":"exact"}],"termid":"MONDO:0018581","xrefs":{"Monarch":{"xref_id":"0018581"}}}


id: PBO:0087015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribonucleotide-diphosphate reductase (RNR) small subunit; the RNR complex catalyzes the rate-limiting step in dNTP synthesis and is regulated by DNA replication and DNA damage checkpoint pathways via localization of the small subunits; relocalizes from nucleus to cytoplasm upon DNA replication stress; RNR4 has a paralog, RNR2, that arose from the whole genome duplication","termid":"PBO:0087015"}


id: PBO:0087154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA export factor associated with the nuclear pore complex (NPC); associates with NUP116p; required for polyadenylated RNA export but not for protein import; homologous to S. pombe Rae1p and human RAE1","termid":"PBO:0087154"}


id: PBO:0060723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A10","termid":"PBO:0060723"}


id: MONDO:0005771
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign condition characterized by the development of irregular patches in the surface of the tongue resulting in a map-like appearance. The patches migrate from day to day and usually resolve without treatment.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrophic glossitis","termid":"MONDO:0001989"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"geographic tongue","secondary_identifiers":["EFO:0007283","icd11.foundation:1460387786","DOID:1455","ICD9:529.1","SCTID:59032001","UMLS:C0017677","MEDGEN:6619","NCIT:C84588","ICD10CM:K14.1"],"synonyms":[{"name":"Pityriasis linguae","type":"exact"},{"name":"benign migratory glossitis","type":"exact"},{"name":"glossitis areata exfoliativa","type":"exact"}],"termid":"MONDO:0005771","xrefs":{"Monarch":{"xref_id":"0005771"}}}


id: PBO:0040938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 9","termid":"PBO:0040938"}


id: PBO:0017499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane nicotinic acid transmembrane transporter (predicted)","termid":"PBO:0017499"}


id: PBO:0000000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene characterisation status","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"published","termid":"PBO:0000000"}


id: PBO:0027409
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_catabolic_process_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0027409"}


id: GO:0021691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the cerebellar Purkinje cell layer to attain its fully functional state. The Purkinje cell layer lies just underneath the molecular layer of the cerebellar cortex. It contains the neuronal cell bodies of the Purkinje cells that are arranged side by side in a single layer. Candelabrum interneurons are vertically oriented between the Purkinje cells. Purkinje neurons are inhibitory and provide the output of the cerebellar cortex through axons that project into the white matter. Extensive dendritic trees from the Purkinje cells extend upward in a single plane into the molecular layer where they synapse with parallel fibers of granule cells.","definition_xrefs":["GOC:cls","ISBN:0838580343","GOC:dph","GOC:jid","GOC:dgh","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure maturation","termid":"GO:0071695"},{"relation_name":"part_of","term_name":"cerebellar Purkinje cell layer development","termid":"GO:0021680"},{"relation_name":"part_of","term_name":"cerebellar cortex maturation","termid":"GO:0021699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar Purkinje cell layer maturation","termid":"GO:0021691"}


id: PBO:0057552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 665","termid":"PBO:0057552"}


id: GO:0106159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent small RNA loading onto RISC.","definition_xrefs":["PMID:29775584","GOC:ha"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of small RNA loading onto RISC (obsolete GO:0106159)","termid":"GO:0106159"}


id: GO:0102399
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: S-adenosyl-L-methionine + dTDP-3-N-methylamino-4-oxo-2,3,6-trideoxy-alpha-D-glucose = S-adenosyl-L-homocysteine + dTDP-3-N,N-dimethylamino-4-oxo-2,3,6-trideoxy-alpha-D-glucose + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete dTDP-3-N-methylamino-4-oxo-2,3,6-trideoxy-alpha-D-glucose N-methyltransferase activity (obsolete GO:0102399)","termid":"GO:0102399"}


id: PBO:0049426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GUSB pseudogene 3","termid":"PBO:0049426"}


id: PBO:0003842
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae TOP2","termid":"PBO:0003842"}


id: MONDO:0957428
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"B-cell acute lymphoblastic leukemia","termid":"MONDO:0004947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"B-lymphoblastic leukemia/lymphoma with t(17;19)","secondary_identifiers":["MEDGEN:1843405","Orphanet:641375","UMLS:C5816789"],"termid":"MONDO:0957428","xrefs":{"Monarch":{"xref_id":"0957428"}}}


id: PBO:0091111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APC amino acid transmembrane transporter","termid":"PBO:0091111"}


id: GO:0051390
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that terminates the activity of the active enzyme MAP kinase kinase kinase (MAPKKK).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete inactivation of MAPKKK activity (obsolete GO:0051390)","synonyms":[{"name":"inactivation of MAP kinase kinase kinase activity","type":"exact"},{"name":"termination of MAP kinase kinase kinase activity","type":"exact"},{"name":"termination of MAPKKK activity","type":"exact"}],"termid":"GO:0051390"}


id: MONDO:0005960
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Silicosis is a respiratory disease caused by breathing in (inhaling) silica dust. There are three types of silicosis: Simple chronic silicosis, the most common type of silicosis, results from long-term exposure (usually more than 20years) to low amounts of silica dust. Simple chronic silicosismay causepeople to have difficulty breathing. Accelerated silicosis occurs after 5 to 15 yearsof exposure of higher levels of silica.Swelling of the lungsand other symptoms occur faster in this type of silicosis than in the simple chronic form. Acute silicosis results from short-term exposure (weeks or months) of large amounts of silica.The lungs become very inflamed and can fill with fluid, causing severe shortness of breath and low blood oxygen levels. A cough, weight loss, and fatigue may also be present. Acute silicosis progresses rapidly and can be fatal within months. People who work in jobs where they are exposed to silica dust (mining, quarrying, construction, sand blasting, stone cutting) are at risk of developing this condition.","direct_ancestors":[{"relation_name":"is_a","term_name":"pneumoconiosis","termid":"MONDO:0015926"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silicosis","secondary_identifiers":["GARD:7647","MESH:D012829","MEDGEN:20758","ICD9:502","SCTID:805002","DOID:10325","EFO:0007485","UMLS:C0037116","NCIT:C3369"],"synonyms":[{"name":"accelerated silicosis","type":"related"},{"name":"acute silicosis","type":"related"},{"name":"chronic silicosis","type":"related"},{"name":"experimental silicosis","type":"related"},{"name":"nodular silicosis","type":"related"},{"name":"pneumoconiosis caused by silica","type":"related"},{"name":"pneumoconiosis due to silica","type":"exact"},{"name":"pneumoconiosis due to silicates","type":"exact"},{"name":"silica pneumoconiosis","type":"exact"},{"name":"silicatosis","type":"related"},{"name":"silicosis","type":"exact"},{"name":"silicotic fibrosis of lung","type":"exact"},{"name":"silicotuberculosis","type":"narrow"}],"termid":"MONDO:0005960","xrefs":{"Monarch":{"xref_id":"0005960"}}}


id: MOD:01491
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a threonine residue with the Applied Biosystems iTRAQ4plex-114 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ4plex-114 reporter+balance reagent acylated residue","termid":"MOD:01485"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent O-acylated residue","termid":"MOD:01713"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ4plex-114 reporter+balance reagent O3-acylated threonine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"iTRAQ4plex114","type":"related"}],"termid":"MOD:01491"}


id: MONDO:1012716
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any difference of sexual development that occurs in horses with a XY karyotype.","definition_xrefs":["OMIA:001601-9796"],"direct_ancestors":[{"relation_name":"is_a","term_name":"difference of sexual differentiation, non-human animal","termid":"MONDO:0700105"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XY difference of sexual development, horse","termid":"MONDO:1012716","xrefs":{"Monarch":{"xref_id":"1012716"}}}


id: GO:2000504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of blood vessel remodeling.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of tissue remodeling","termid":"GO:0034105"},{"relation_name":"is_a","term_name":"regulation of blood vessel remodeling","termid":"GO:0060312"},{"relation_name":"positively_regulates","term_name":"blood vessel remodeling","termid":"GO:0001974"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of blood vessel remodeling","synonyms":[{"name":"positive regulation of blood vessel remodelling","type":"exact"}],"termid":"GO:2000504"}


id: PBO:0065290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich transmembrane protein 4","termid":"PBO:0065290"}


id: SO:0002039
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A shRNA primary transcript that also encodes pre-miR sequence that is processed to form functionally active miRNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_part","term_name":"pre_miRNA","termid":"SO:0001244"},{"relation_name":"is_a","term_name":"shRNA_primary_transcript","termid":"SO:0002038"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"miR_encoding_shRNA_primary_transcript","synonyms":[{"name":"miR encoding shRNA primary transcript","type":"exact"}],"termid":"SO:0002039"}


id: MONDO:0008187
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial panic disorder","termid":"MONDO:0031240"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"panic disorder 1","secondary_identifiers":["UMLS:C1868649","MEDGEN:401493","OMIM:167870"],"synonyms":[{"name":"PAND1","type":"exact"},{"name":"panic disorder","type":"related"},{"name":"panic disorder 1","type":"exact"},{"name":"panic disorder susceptibility locus, chromosome 13Q-related","type":"related"},{"name":"panic disorder syndrome 1","type":"exact"},{"name":"panic disorder with Joint laxity","type":"related"},{"name":"panic disorder with bladder conditions","type":"related"},{"name":"panic disorder, susceptibility to","type":"exact"}],"termid":"MONDO:0008187","xrefs":{"Monarch":{"xref_id":"0008187"}}}


id: PBO:0069875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1162, pseudogene","termid":"PBO:0069875"}


id: MONDO:0025087
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute, highly contagious disease affecting swine of all ages and caused by the classical swine fever virus. It has a sudden onset with high morbidity and mortality.","definition_xrefs":["MESH:D006691"],"direct_ancestors":[{"relation_name":"is_a","term_name":"swine disease","termid":"MONDO:0024990"},{"relation_name":"is_a","term_name":"pestivirus infectious disease, non-human animal","termid":"MONDO:0700203"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"classical swine fever","synonyms":[{"name":"Hog cholera","type":"related"},{"name":"cholera, Hog","type":"related"},{"name":"swine fever","type":"related"},{"name":"swine fever, classical","type":"related"}],"termid":"MONDO:0025087","xrefs":{"Monarch":{"xref_id":"0025087"}}}


id: PBO:0017650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Seh1-associated complex subunit Seh1","termid":"PBO:0017650"}


id: GO:0033656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change that impairs the structure or function of the host chloroplast. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated disruption of host cellular anatomical structure","termid":"GO:0052008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated disruption of host chloroplast","synonyms":[{"name":"disruption by symbiont of host chloroplast","type":"exact"},{"name":"modification by symbiont of host chloroplast","type":"related"}],"termid":"GO:0033656"}


id: MONDO:0013263
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the PCARE gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"},{"relation_name":"is_a","term_name":"PCARE-related retinopathy","termid":"MONDO:0800404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"retinitis pigmentosa 54","secondary_identifiers":["ICD10CM:H35.5","MEDGEN:462041","UMLS:C3150691","DOID:0110364","OMIM:613428","GARD:15662"],"synonyms":[{"name":"PCARE retinitis pigmentosa","type":"exact"},{"name":"RP54","type":"exact"},{"name":"retinitis pigmentosa 54","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in PCARE","type":"exact"},{"name":"retinitis pigmentosa type 54","type":"exact"}],"termid":"MONDO:0013263","xrefs":{"Monarch":{"xref_id":"0013263"}}}


id: PBO:0078646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon CTT) 2-2","termid":"PBO:0078646"}


id: PATO:0002114
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A composition quality inhering in a bearer by virtue of the bearer's containing excess lipid.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"composition","termid":"PATO:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty","termid":"PATO:0002114"}


id: PBO:0059444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane spanning 4-domains A15","termid":"PBO:0059444"}


id: MONDO:0013725
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary nonpolyposis colon cancer in which the cause of the disease is a mutation in the MLH3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"Lynch syndrome","termid":"MONDO:0005835"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"hereditary nonpolyposis colon cancer","termid":"MONDO:0018630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"colorectal cancer, hereditary nonpolyposis, type 7","secondary_identifiers":["GARD:15799","MESH:C565777","MEDGEN:346893","DOID:0070276","UMLS:C1858380","OMIM:614385"],"synonyms":[{"name":"HNPCC7","type":"related"},{"name":"MLH3 hereditary nonpolyposis colon cancer","type":"exact"},{"name":"colorectal cancer, hereditary nonpolyposis, type 7","type":"exact"},{"name":"hereditary nonpolyposis colon cancer caused by mutation in MLH3","type":"exact"}],"termid":"MONDO:0013725","xrefs":{"Monarch":{"xref_id":"0013725"}}}


id: PBO:0042490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin 12 pseudogene 3","termid":"PBO:0042490"}


id: MONDO:0028618
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete gastroenteric neuroendocrine neoplasm (obsolete MONDO:0028618)","secondary_identifiers":["Orphanet:481508"],"termid":"MONDO:0028618","xrefs":{"Monarch":{"xref_id":"0028618"}}}


id: PR:O43013
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- csi1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C2G2.14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G2.14","synonyms":[{"name":"Spom972h-csi1","type":"exact"}],"termid":"PR:O43013"}


id: PBO:0059088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MORC1 antisense RNA 1","termid":"PBO:0059088"}


id: PBO:0069126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 376, pseudogene","termid":"PBO:0069126"}


id: PBO:0077877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiopurine S-methyltransferase pseudogene 4","termid":"PBO:0077877"}


id: PBO:0064136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate kinase M1/2 pseudogene 3","termid":"PBO:0064136"}


id: MONDO:0007901
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"levator-medial rectus synkinesis","secondary_identifiers":["MESH:C563625","OMIM:151610","UMLS:C1835403","MEDGEN:320592"],"synonyms":[{"name":"levator-medial rectus synkinesis","type":"exact"},{"name":"oculomotor-levator synkinesis","type":"related"}],"termid":"MONDO:0007901","xrefs":{"Monarch":{"xref_id":"0007901"}}}


id: GO:0043028
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and modulates the activity of a cysteine-type endopeptidase involved in the apoptotic process.","definition_xrefs":["PMID:14744432","Wikipedia:Caspase","GOC:mtg_apoptosis","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme regulator activity","termid":"GO:0030234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0003674","GO:0098772","GO:0030234"],"is_obsolete":false,"name":"cysteine-type endopeptidase regulator activity involved in apoptotic process","synonyms":[{"name":"caspase regulator activity","type":"broad"}],"termid":"GO:0043028"}


id: MONDO:0008303
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial male limited precocious puberty (FMPP) is a gonadotropin-independent familial form of male-limited precocious puberty, generally presenting between 2-5 years of age as accelerated growth, early development of secondary sexual characteristics and reduced adult height.","definition_xrefs":["Orphanet:3000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"peripheral precocious puberty","termid":"MONDO:0015791"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial male-limited precocious puberty","secondary_identifiers":["OMIM:176410","MedDRA:10063654","GARD:4475","DOID:0111545","MedDRA:10063656","SCTID:237818003","UMLS:C0342549","MEDGEN:87444"],"synonyms":[{"name":"FMPP","type":"exact"},{"name":"LHCGR peripheral precocious puberty","type":"exact"},{"name":"Leydig cell adenoma, somatic, with male-limited precocious puberty","type":"related"},{"name":"familial Testotoxicosis (subtype)","type":"related"},{"name":"familial gonadotropin-independent male-limited sexual precocity","type":"exact"},{"name":"leydig cell adenoma, somatic, with precocious puberty","type":"exact"},{"name":"male-limited precocious puberty","type":"exact"},{"name":"peripheral precocious puberty caused by mutation in LHCGR","type":"exact"},{"name":"precocious puberty, male","type":"exact"},{"name":"precocious puberty, male limited","type":"related"},{"name":"precocious puberty, male-limited","type":"related"},{"name":"pubertas praecox","type":"broad"},{"name":"sexual precocity, familial, gonadotropin-independent","type":"related"},{"name":"testotoxicosis","type":"exact"},{"name":"testotoxicosis, familial","type":"exact"}],"termid":"MONDO:0008303","xrefs":{"Monarch":{"xref_id":"0008303"}}}


id: PBO:0053377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 303","termid":"PBO:0053377"}


id: GO:0009747
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by hexose and dependent on the detection of hexokinase.","definition_xrefs":["GOC:sm","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose mediated signaling","termid":"GO:0009757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"hexokinase-dependent signaling","synonyms":[{"name":"hexokinase-dependent signalling","type":"exact"}],"termid":"GO:0009747"}


id: PBO:0031578
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromosome_organization","termid":"PBO:0031578"}


id: PBO:0050523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox D11","termid":"PBO:0050523"}


id: PBO:0028671
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_Sad1_foci_during_response_to_DNA_damage","termid":"PBO:0028671"}


id: PR:Q9C0Z4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAPB21F2.02 gene.","definition_xrefs":["UniProtKB:Q9C0Z4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein dopey (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB21F2.02","synonyms":[{"name":"Spom972h-SPAPB21F2.02","type":"exact"}],"termid":"PR:Q9C0Z4"}


id: FYPO:0007368
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell's energy charge higher than normal. Energy charge is a measure of energy available to the cell, as reflected in the ATP-ADP-AMP balance and defined as (ATP + 1/2 ADP)/(AMP + ADP + ATP).","definition_xrefs":["PomBase:mah","PMID:6027798","PMID:32319721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased energy charge","termid":"FYPO:0007368"}


id: MONDO:0009711
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic disorder caused by mutations in the TPM3, ACTA1, RYR1 or SEPN1 genes. It is inherited in an autosomal dominant or recessive pattern and rarely in an X-linked pattern. It manifests with myopathy throughout the body, particularly in the muscles of the shoulders, upper arms, hips, and thighs. Affected individuals may have contractures, lordosis, or scoliosis. In a minority of cases mild to severe breathing problems may occur.","definition_xrefs":["PMID:31578728","NCIT:C120046"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"qualitative or quantitative defects of alpha-actin","termid":"MONDO:0016193"},{"relation_name":"excluded_subClassOf","term_name":"qualitative or quantitative defects of selenoprotein N1","termid":"MONDO:0016197"},{"relation_name":"excluded_subClassOf","term_name":"qualitative or quantitative defects of tropomyosin","termid":"MONDO:0017303"},{"relation_name":"excluded_subClassOf","term_name":"alpha-actinopathy","termid":"MONDO:0100084"},{"relation_name":"excluded_subClassOf","term_name":"TPM3-related myopathy","termid":"MONDO:0100108"},{"relation_name":"excluded_subClassOf","term_name":"RYR1-related myopathy","termid":"MONDO:0100150"},{"relation_name":"excluded_subClassOf","term_name":"TPM2-related myopathy","termid":"MONDO:0100196"},{"relation_name":"is_a","term_name":"congenital structural myopathy","termid":"MONDO:0002921"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"congenital fiber-type disproportion myopathy","secondary_identifiers":["NANDO:2200868","Orphanet:2020","UMLS:C0546264","NANDO:1200483","GARD:6161","DOID:0080102","MEDGEN:108177"],"synonyms":[{"name":"CFTDM","type":"exact"},{"name":"congenital fiber type disproportion","type":"related"},{"name":"congenital fiber-type disproportion","type":"exact"},{"name":"congenital fibre type disproportion","type":"related"},{"name":"congenital myopathy with fiber type disproportion","type":"exact"},{"name":"congenital myopathy with fibre type disproportion","type":"exact"},{"name":"myopathy, congenital with fiber-type disproportion","type":"related"}],"termid":"MONDO:0009711","xrefs":{"Monarch":{"xref_id":"0009711"}}}


id: GO:0050484
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 5'-GMP + H2O = guanosine + phosphate.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete GMP 5'-nucleotidase activity (obsolete GO:0050484)","secondary_identifiers":["MetaCyc:RXN-7609"],"synonyms":[{"name":"GMP 5' nucleotidase activity","type":"exact"},{"name":"IMP-GMP specific 5'-nucleotidase activity","type":"related"}],"termid":"GO:0050484"}


id: MONDO:0012610
data:
  {"annotated_genes":["SJAG_03136"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89176],"is_not":false,"summary":null,"term":"MONDO:0012610"}]},"cv_name":"mondo","definition":"Any inflammatory bowel disease in which the cause of the disease is a mutation in the ATG16L1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03136":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"inflammatory bowel disease 10","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1970207","DOID:0110885","MEDGEN:370205","MESH:C567021","OMIM:611081"],"synonyms":[{"name":"ATG16L1 inflammatory bowel disease","type":"exact"},{"name":"IBD10","type":"exact"},{"name":"inflammatory bowel disease (Crohn disease) 10","type":"exact"},{"name":"inflammatory bowel disease 10","type":"exact"},{"name":"inflammatory bowel disease caused by mutation in ATG16L1","type":"exact"},{"name":"inflammatory bowel disease type 10","type":"exact"}],"termid":"MONDO:0012610","terms_by_termid":{"MONDO:0012610":null},"xrefs":{"Monarch":{"xref_id":"0012610"}}}


id: MONDO:0006290
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A gonadal or extragonadal malignant neoplasm that arises from germ cells. Representative examples include embryonal carcinoma, yolk sac tumor, and seminoma.","definition_xrefs":["NCIT:C4925"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cancer","termid":"MONDO:0004992"},{"relation_name":"is_a","term_name":"germ cell tumor","termid":"MONDO:0005040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant germ cell tumor","secondary_identifiers":["UMLS:C4048549","GARD:3360","SCTID:145831000119103","EFO:1000352","MEDGEN:890580"],"synonyms":[{"name":"cancer of germ cell","type":"exact"},{"name":"germ cell cancer","type":"exact"},{"name":"germ cell tumor, malignant","type":"exact"},{"name":"malignant germ cell neoplasm","type":"exact"},{"name":"malignant germ cell tumor","type":"exact"},{"name":"malignant neoplasm of germ cell","type":"exact"},{"name":"malignant neoplasm of the germ cell","type":"exact"},{"name":"malignant tumor of germ cell","type":"exact"},{"name":"malignant tumor of the germ cell","type":"exact"},{"name":"malignant tumour of germ cell","type":"exact"},{"name":"malignant tumour of the germ cell","type":"exact"}],"termid":"MONDO:0006290","xrefs":{"Monarch":{"xref_id":"0006290"}}}


id: PBO:0090966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab GAP Gyp10","termid":"PBO:0090966"}


id: GO:1990790
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glial cell derived neurotrophic factor stimulus.","definition_xrefs":["PMID:20877310"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to growth factor","termid":"GO:0070848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to glial cell derived neurotrophic factor","synonyms":[{"name":"response to ATF","type":"exact"},{"name":"response to GDNF","type":"exact"},{"name":"response to astrocyte-derived trophic factor","type":"exact"}],"termid":"GO:1990790"}


id: MONDO:0003735
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A variant of teratoma composed of incompletely differentiated components resembling fetal tissues. Even if the immature component is only a minor element of an otherwise differentiated teratoma, the tumor is still classified as immature. (Adapted from WHO)","definition_xrefs":["NCIT:C7014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system teratoma","termid":"MONDO:0002718"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central nervous system immature teratoma","secondary_identifiers":["DOID:6019","UMLS:C1332883","ONCOTREE:BIMT","MEDGEN:272442"],"synonyms":[{"name":"CNS immature teratoma","type":"exact"},{"name":"central nervous system immature teratoma","type":"exact"},{"name":"immature teratoma","type":"related"},{"name":"immature teratoma of CNS","type":"exact"},{"name":"immature teratoma of central nervous system","type":"exact"},{"name":"immature teratoma of the CNS","type":"exact"},{"name":"immature teratoma of the central nervous system","type":"exact"}],"termid":"MONDO:0003735","xrefs":{"Monarch":{"xref_id":"0003735"}}}


id: PBO:0043697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 5B pseudogene 3","termid":"PBO:0043697"}


id: MONDO:0002861
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sarcoma that arises from the testis. The majority of cases arise from teratomas or spermatocytic seminomas.","definition_xrefs":["NCIT:C6359"],"direct_ancestors":[{"relation_name":"is_a","term_name":"testicular cancer","termid":"MONDO:0005447"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"testis sarcoma","secondary_identifiers":["UMLS:C1336727","MEDGEN:234943","DOID:4062"],"synonyms":[{"name":"sarcoma of testis","type":"exact"},{"name":"sarcoma of the testis","type":"exact"},{"name":"testicular sarcoma","type":"exact"},{"name":"testis sarcoma","type":"exact"}],"termid":"MONDO:0002861","xrefs":{"Monarch":{"xref_id":"0002861"}}}


id: GO:0010059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that induces or promotes atrichoblast fate specification.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of atrichoblast fate specification","termid":"GO:0010058"},{"relation_name":"is_a","term_name":"positive regulation of cell fate specification","termid":"GO:0042660"},{"relation_name":"is_a","term_name":"positive regulation of plant epidermal cell differentiation","termid":"GO:1903890"},{"relation_name":"positively_regulates","term_name":"atrichoblast fate specification","termid":"GO:0010056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of atrichoblast fate specification","synonyms":[{"name":"activation of atrichoblast fate","type":"narrow"},{"name":"stimulation of atrichoblast fate","type":"narrow"},{"name":"up regulation of atrichoblast fate","type":"exact"},{"name":"up-regulation of atrichoblast fate","type":"exact"},{"name":"upregulation of atrichoblast fate","type":"exact"}],"termid":"GO:0010059"}


id: PBO:0081115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger AN1-type containing 4","termid":"PBO:0081115"}


id: GO:2000950
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of xyloglucan metabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macromolecule metabolic process","termid":"GO:0010604"},{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"regulation of xyloglucan metabolic process","termid":"GO:2000948"},{"relation_name":"positively_regulates","term_name":"xyloglucan metabolic process","termid":"GO:0010411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"positive regulation of xyloglucan metabolic process","synonyms":[{"name":"positive regulation of xyloglucan metabolism","type":"exact"}],"termid":"GO:2000950"}


id: PBO:0040796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic helix-loop-helix family member a9","termid":"PBO:0040796"}


id: PBO:0052933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 21-1","termid":"PBO:0052933"}


id: PBO:0081302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 84","termid":"PBO:0081302"}


id: PBO:0053538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 540","termid":"PBO:0053538"}


id: MONDO:0020098
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete constitutional anemia due to iron metabolism disorder (obsolete MONDO:0020098)","secondary_identifiers":["Orphanet:98360"],"termid":"MONDO:0020098","xrefs":{"Monarch":{"xref_id":"0020098"}}}


id: PR:Q9P7Y3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pkr1 gene.","definition_xrefs":["UniProtKB:Q9P7Y3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type ATPase assembly factor pkr1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP23A10.02","synonyms":[{"name":"Spom972h-pkr1","type":"exact"}],"termid":"PR:Q9P7Y3"}


id: MONDO:0018975
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A clinically heterogeneous, neurocutaneous genetic disorder characterized by cafe-au-lait spots, iris Lisch nodules, axillary and inguinal freckling, and multiple neurofibromas.","definition_xrefs":["Orphanet:636"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"excluded_subClassOf","term_name":"obsolete Moyamoya syndrome (obsolete MONDO:0018792)","termid":"MONDO:0018792"},{"relation_name":"excluded_subClassOf","term_name":"obsolete rare skin tumor or hamartoma (obsolete MONDO:0019300)","termid":"MONDO:0019300"},{"relation_name":"excluded_subClassOf","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"},{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"},{"relation_name":"is_a","term_name":"RASopathy","termid":"MONDO:0021060"},{"relation_name":"is_a","term_name":"neurofibromatosis","termid":"MONDO:0021061"},{"relation_name":"is_a","term_name":"neurocristopathy","termid":"MONDO:0021635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"neurofibromatosis type 1","secondary_identifiers":["NANDO:2201003","SCTID:92824003","NANDO:1200225","MEDGEN:18013","DOID:0111253","MESH:C538607","NCIT:C3273","ICD9:237.71","MESH:D009456","NANDO:1200226","NANDO:2100287","OMIM:162200","UMLS:C0027831","NORD:1502","icd11.foundation:337970533","MedDRA:10047712","GARD:7866","ICD10CM:Q85.01","DECIPHER:15"],"synonyms":[{"name":"NF1","type":"exact"},{"name":"Neurofibromatosis 1","type":"exact"},{"name":"Nf1-Microdeletion syndrome","type":"exact"},{"name":"Recklinghausen's disease","type":"related"},{"name":"Von Recklinghausen disease","type":"related"},{"name":"neurofibromatosis","type":"broad"},{"name":"neurofibromatosis 1","type":"exact"},{"name":"neurofibromatosis type 1","type":"exact"},{"name":"neurofibromatosis type 1 microdeletion syndrome","type":"related"},{"name":"neurofibromatosis type i","type":"exact"},{"name":"neurofibromatosis, peripheral type","type":"related"},{"name":"neurofibromatosis, type 1","type":"exact"},{"name":"neurofibromatosis, type I","type":"related"},{"name":"nonmosaic NF1","type":"exact"},{"name":"nonmosaic neurofibromatosis type 1","type":"exact"},{"name":"peripheral neurofibromatosis","type":"exact"},{"name":"type 1 neurofibromatosis","type":"related"},{"name":"von Reklinghausen disease","type":"related"}],"termid":"MONDO:0018975","xrefs":{"Monarch":{"xref_id":"0018975"}}}


id: MONDO:0020106
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hemolytic anemia due to a disorder of glycolytic enzymes (obsolete MONDO:0020106)","secondary_identifiers":["Orphanet:98372"],"termid":"MONDO:0020106","xrefs":{"Monarch":{"xref_id":"0020106"}}}


id: PBO:0051290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1D-8","termid":"PBO:0051290"}


id: MONDO:0005766
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pulmonary diseases caused by fungal infections, usually through hematogenous spread.","definition_xrefs":["MESH:D008172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal infectious disease","termid":"MONDO:0002041"},{"relation_name":"is_a","term_name":"lung disorder","termid":"MONDO:0005275"},{"relation_name":"is_a","term_name":"respiratory tract infectious disorder","termid":"MONDO:0024355"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fungal lung infectious disease","secondary_identifiers":["EFO:0007278","UMLS:C0024116","MEDGEN:6144"],"synonyms":[{"name":"Fungi caused lung disease","type":"exact"},{"name":"Fungi lung disease","type":"exact"},{"name":"fungal disease, pulmonary","type":"related"},{"name":"fungal diseases, pulmonary","type":"related"},{"name":"fungal infection, pulmonary","type":"related"},{"name":"fungal infections, pulmonary","type":"related"},{"name":"fungal lung disease","type":"related"},{"name":"fungal lung diseases","type":"related"},{"name":"lung disease, fungal","type":"related"},{"name":"pulmonary fungal disease","type":"related"},{"name":"pulmonary fungal diseases","type":"related"},{"name":"pulmonary fungal infection","type":"related"},{"name":"pulmonary fungal infections","type":"related"}],"termid":"MONDO:0005766","xrefs":{"Monarch":{"xref_id":"0005766"}}}


id: PBO:0085206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Outer mitochondrial membrane GTPase, subunit of the ERMES complex; potential regulatory subunit of the ERMES complex that links the ER to mitochondria and may promote inter-organellar calcium and phospholipid exchange as well as coordinating mitochondrial DNA replication and growth; cells lacking Gem1p contain collapsed, globular, or grape-like mitochondria; ortholog of metazoan Miro GTPases","termid":"PBO:0085206"}


id: MONDO:1011143
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Choanal atresia that occurs in llama.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choanal atresia, non-human animal","termid":"MONDO:1010289"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choanal atresia, llama","secondary_identifiers":["OMIA:001764-9844"],"termid":"MONDO:1011143","xrefs":{"Monarch":{"xref_id":"1011143"}}}


id: PBO:0038377
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_treated_by_substance","termid":"PBO:0038377"}


id: PBO:0086676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by fungal homology comparisons and RT-PCR; this ORF partially overlaps RDN5-4; YLR157C-C has a paralog, YLR154C-H, that arose from a segmental duplication","termid":"PBO:0086676"}


id: PBO:0038353
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-stem_parasite_of","termid":"PBO:0038353"}


id: FYPO:0007584
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which cell length is normal, and the cell contains more than one septum.","definition_xrefs":["PMID:19736319","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiseptate vegetative cell","termid":"FYPO:0000118"},{"relation_name":"is_a","term_name":"normal vegetative cell length","termid":"FYPO:0003503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001312","FYPO:0000032","FYPO:0001320","FYPO:0000257","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"multiseptate vegetative cell with normal cell length","synonyms":[{"name":"multiseptate cell with normal cell length during vegetative growth","type":"exact"},{"name":"multiseptate vegetative cell with normal cell length during mitotic cell cycle","type":"related"},{"name":"multiseptate vegetative cell with normal length","type":"exact"},{"name":"normal length multiseptate vegetative cell","type":"exact"}],"termid":"FYPO:0007584"}


id: MONDO:0008021
data:
  {"annotated_genes":["SJAG_03131"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87606],"is_not":false,"summary":null,"term":"MONDO:0008021"}]},"cv_name":"mondo","definition":"Any Cowden disease in which the cause of the disease is a mutation in the PTEN gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Cowden disease","termid":"MONDO:0016063"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03131":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0000426"],"is_obsolete":false,"name":"Cowden syndrome 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16450","OMIM:158350"],"synonyms":[{"name":"CS","type":"related"},{"name":"CWS1","type":"related"},{"name":"Cowden disease caused by mutation in PTEN","type":"exact"},{"name":"Cowden syndrome 1","type":"exact"},{"name":"Cowden syndrome type 1","type":"exact"},{"name":"Lhermitte-Duclos disease","type":"related"},{"name":"Lhermitte-Duclos syndrome","type":"exact"},{"name":"PTEN Cowden disease","type":"exact"},{"name":"Proteus-like syndrome","type":"related"},{"name":"cerebellar granule cell Hypertrophy and megalencephaly","type":"related"},{"name":"cerebelloparenchymal disorder 6","type":"related"},{"name":"dysplastic gangliocytoma of the cerebellum","type":"related"},{"name":"multiple hamartoma syndrome","type":"related"}],"termid":"MONDO:0008021","terms_by_termid":{"MONDO:0008021":null},"xrefs":{"Monarch":{"xref_id":"0008021"}}}


id: PATO:0001150
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001150 absolute susceptibility value (obsolete PATO:0001150)","termid":"PATO:0001150"}


id: GO:0009825
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell irreversibly increases in size in two or three [spatial] dimensions or along two or three axes.","definition_xrefs":["ISBN:0943088399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell growth","termid":"GO:0016049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"multidimensional cell growth","synonyms":[{"name":"cell growth in three dimensions","type":"exact"},{"name":"cell growth in two dimensions","type":"narrow"}],"termid":"GO:0009825"}


id: SO:0000507
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non functional descendant of an exon, part of a pseudogene.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudogenic_region","termid":"SO:0000462"},{"relation_name":"non_functional_homolog_of","term_name":"exon","termid":"SO:0000147"},{"relation_name":"part_of","term_name":"pseudogenic_transcript","termid":"SO:0000516"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudogenic_exon","synonyms":[{"name":"pseudogenic exon","type":"exact"}],"termid":"SO:0000507"}


