# terms

id: PBO:0090243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Rrp7","termid":"PBO:0090243"}


id: MONDO:0017009
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of chromosome X","termid":"MONDO:0017008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of the short arm of chromosome X","secondary_identifiers":["Orphanet:263775","GARD:12421","UMLS:C5679686","MEDGEN:1826027"],"synonyms":[{"name":"partial duplication of chromosome Xp","type":"exact"},{"name":"partial duplication of the short arm of chromosome type X","type":"exact"},{"name":"partial trisomy of chromosome Xp","type":"exact"},{"name":"partial trisomy of the short arm of chromosome X","type":"exact"}],"termid":"MONDO:0017009","xrefs":{"Monarch":{"xref_id":"0017009"}}}


id: PBO:0087586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C); which is a ubiquitin-protein ligase required for degradation of anaphase inhibitors, including mitotic cyclins, during the metaphase/anaphase transition; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0087586"}


id: PR:P36595
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerases I, II, and III subunit RPABC2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10773:SF8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerases I, II, and III subunit RPABC2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1020.04c","secondary_identifiers":["UniProtKB:P36595"],"synonyms":[{"name":"DNA-directed RNA polymerases I, II, and III 15 kDa polypeptide (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerases I, II, and III subunit ABC2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RPC16 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPCC1020.04c","type":"related"},{"name":"Spom972h-POLR2F","type":"exact"},{"name":"rpo15","type":"related"}],"termid":"PR:P36595"}


id: GO:2000308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tumor necrosis factor (ligand) superfamily member 11 production.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of tumor necrosis factor superfamily cytokine production","termid":"GO:1903556"},{"relation_name":"is_a","term_name":"regulation of tumor necrosis factor (ligand) superfamily member 11 production","termid":"GO:2000307"},{"relation_name":"negatively_regulates","term_name":"tumor necrosis factor (ligand) superfamily member 11 production","termid":"GO:0072535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of tumor necrosis factor (ligand) superfamily member 11 production","synonyms":[{"name":"negative regulation of RANKL production","type":"exact"},{"name":"negative regulation of TNFSF11 production","type":"exact"}],"termid":"GO:2000308"}


id: PBO:0050294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histamine N-methyltransferase","termid":"PBO:0050294"}


id: GO:0075152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism stops, prevents, or reduces the frequency, rate or extent of its symbiont receptor-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of receptor-mediated signal transduction in response to host (obsolete GO:0075152)","synonyms":[{"name":"negative regulation of symbiont receptor-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075152"}


id: GO:0044195
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Long, dynamic tubular channels, formed by invagination of the nuclear envelope, that extend deep into the nucleoplasm. The channels have an underlying lamina and are implicated in functioning in signaling and transport.","definition_xrefs":["GOC:jl","PMID:17959832","PMID:9024685"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"nuclear envelope","termid":"GO:0005635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634"],"is_obsolete":false,"name":"nucleoplasmic reticulum","synonyms":[{"name":"nuclear channels","type":"exact"}],"termid":"GO:0044195"}


id: PR:O13909
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23C11.01 gene.","definition_xrefs":["UniProtKB:O13909","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C23C11.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C11.01","synonyms":[{"name":"Spom972h-SPAC23C11.01","type":"exact"}],"termid":"PR:O13909"}


id: PBO:0055245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2672","termid":"PBO:0055245"}


id: GO:1901514
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + lipo-chitin oligosaccharide(in) = ADP + phosphate + lipo-chitin oligosaccharide(out).","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATPase-coupled transmembrane transporter activity","termid":"GO:0042626"},{"relation_name":"is_a","term_name":"lipo-chitin oligosaccharide transmembrane transporter activity","termid":"GO:1901513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"ATPase-coupled lipo-chitin oligosaccharide transmembrane transporter activity","synonyms":[{"name":"lipo-chitin oligosaccharide transmembrane-transporting ATPase activity","type":"related"}],"termid":"GO:1901514"}


id: MONDO:0007311
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare subtype of CMT1 characterized by a variable clinical presentation. Onset within the first two years of life with a delay in walking is not uncommon; however, onset may occur later. CMT1E is caused by point mutations in the PMP22 (17p12) gene. The disease severity depends on the particular PMP22 mutation, with some cases being very mild and even resembling hereditary neuropathy with liability to pressure palsies, while others having an earlier onset with a more severe phenotype (reminiscent of Dejerine-Sottas syndrome) than that seen in CMT1A, caused by gene duplication. These severe cases may also report deafness and much slower motor nerve conduction velocities compared to CMT1A patients.","definition_xrefs":["Orphanet:90658"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 1","termid":"MONDO:0019011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease type 1E","secondary_identifiers":["MEDGEN:501212","DOID:0110153","icd11.foundation:1924906594","GARD:9190","MESH:C537986","OMIM:118300","UMLS:C3495591"],"synonyms":[{"name":"CMT 1E","type":"related"},{"name":"CMT1E","type":"exact"},{"name":"Charcot Marie Tooth disease type 1E","type":"related"},{"name":"Charcot-Marie-Tooth disease and deafness","type":"exact"},{"name":"Charcot-Marie-Tooth disease demyelinating type 1E","type":"exact"},{"name":"Charcot-Marie-Tooth disease, demyelinating, type 1E","type":"related"},{"name":"Charcot-Marie-Tooth disease, type 1E","type":"exact"},{"name":"Charcot-Marie-Tooth disease-deafness","type":"exact"},{"name":"Charcot-Marie-Tooth disease-deafness syndrome","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy and deafness, autosomal dominant","type":"related"},{"name":"autosomal dominant Charcot-Marie-Tooth neuropathy and deafness","type":"exact"}],"termid":"MONDO:0007311","xrefs":{"Monarch":{"xref_id":"0007311"}}}


id: PBO:0051249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (III)-5-1 (pseudogene)","termid":"PBO:0051249"}


id: PBO:0038358
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-over-expressed_in","termid":"PBO:0038358"}


id: PBO:0063601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal biogenesis factor 13","termid":"PBO:0063601"}


id: PBO:0057234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 421","termid":"PBO:0057234"}


id: PBO:0030403
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_potassium_chloride","termid":"PBO:0030403"}


id: MONDO:0002745
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare borderline or malignant epithelial tumor of the fallopian tube characterized by the presence of neoplastic epithelial cells that contain intracytoplasmic mucin and may resemble the epithelial cells of the endocervix or gastrointestinal tract.","definition_xrefs":["NCIT:C40109"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fallopian tube neoplasm","termid":"MONDO:0021092"},{"relation_name":"is_a","term_name":"mucinous neoplasm","termid":"MONDO:0024338"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fallopian tube mucinous tumor","secondary_identifiers":["UMLS:C1517120","MEDGEN:275871","DOID:3705"],"synonyms":[{"name":"fallopian tube mucinous neoplasm","type":"exact"},{"name":"fallopian tube mucinous tumor","type":"exact"}],"termid":"MONDO:0002745","xrefs":{"Monarch":{"xref_id":"0002745"}}}


id: PATO:0002041
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A diameter that is along the anterior-posterior axis.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diameter","termid":"PATO:0001334"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anterior-posterior diameter","termid":"PATO:0002041"}


id: PBO:0073461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surfactant protein B","termid":"PBO:0073461"}


id: _global:inhibited_by
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"Identifies a chemical substance that decreases the activity of the gene product.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibited_by","secondary_identifiers":["GOREL:0000508"],"synonyms":[{"name":"activity_decreased_by","type":"exact"},{"name":"inhibited by","type":"exact"},{"name":"inhibited_by_chemical","type":"exact"},{"name":"inhibited_by_substance","type":"exact"}],"termid":"_global:inhibited_by"}


id: FYPO:0005709
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle pole body is normal (i.e. indistinguishable from wild type) during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to mitotic spindle pole body","termid":"FYPO:0002967"},{"relation_name":"is_a","term_name":"normal protein localization during mitosis","termid":"FYPO:0004328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000138","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to mitotic spindle pole body during mitosis","synonyms":[{"name":"normal protein localisation to mitotic spindle pole body during mitosis","type":"exact"},{"name":"normal protein localization to mitotic SPB during mitosis","type":"exact"},{"name":"normal protein localization to mitotic spindle pole body during mitotic M phase","type":"related"},{"name":"normal protein localization to mitotic spindle pole body during mitotic nuclear division","type":"exact"},{"name":"normal protein localization to spindle pole body during mitosis during vegetative growth","type":"exact"}],"termid":"FYPO:0005709"}


id: PR:O74955
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A translin-associated protein X that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10741:SF1","PRO:DNx","OMA:SCHPO04270"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translin-associated protein X homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC736.09c","secondary_identifiers":["UniProtKB:O74955"],"synonyms":[{"name":"Spom972h-TSNAX","type":"exact"}],"termid":"PR:O74955"}


id: PBO:0040426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V0 subunit e1 pseudogene 3","termid":"PBO:0040426"}


id: MONDO:0000950
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Term generally used to describe complaints related to refractive error, ocular muscle imbalance, including pain or aching around the eyes, burning and itchiness of the eyelids, ocular fatigue, and headaches.","definition_xrefs":["MESH:D001248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"asthenopia","secondary_identifiers":["UMLS:C0004095","DOID:10141","MEDGEN:2108"],"synonyms":[{"name":"accommodative strain","type":"exact"}],"termid":"MONDO:0000950","xrefs":{"Monarch":{"xref_id":"0000950"}}}


id: PBO:0005044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Set3 complex subunit Hif2","termid":"PBO:0005044"}


id: PBO:0056334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP3K14 antisense RNA 1","termid":"PBO:0056334"}


id: GO:0009749
data:
  {"annotated_genes":["SJAG_01699","SJAG_01754","SJAG_01254","SJAG_04026","SJAG_00574","SJAG_03081","SJAG_00472","SJAG_04312","SJAG_02444"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107734,108680,110856,108330,117395,118425,111367,103668,96038],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010619"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glucose stimulus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hexose","termid":"GO:0009746"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00472":null,"SJAG_00574":null,"SJAG_01254":null,"SJAG_01699":null,"SJAG_01754":null,"SJAG_02444":null,"SJAG_03081":null,"SJAG_04026":null,"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to glucose","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"response to glucose stimulus","type":"exact"}],"termid":"GO:0009749","terms_by_termid":{"GO:0010619":null}}


id: GO:1901729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of monensin A.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00178"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol catabolic process","termid":"GO:0046164"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"},{"relation_name":"is_a","term_name":"monensin A metabolic process","termid":"GO:1901728"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"monensin A catabolic process","synonyms":[{"name":"monensin A breakdown","type":"exact"},{"name":"monensin A catabolism","type":"exact"},{"name":"monensin A degradation","type":"exact"},{"name":"monensin breakdown","type":"exact"},{"name":"monensin catabolism","type":"exact"},{"name":"monensin degradation","type":"exact"}],"termid":"GO:1901729"}


id: MONDO:0015437
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ring chromosome 21 syndrome is an autosomal anomaly characterized by variable clinical features, most commonly including growth retardation, developmental delay, intellectual disability, epilepsy, microcephaly, short stature, dysmorphic features, hypogammaglobulinemia, thrombocytopenia and unspecific skeletal anomalies (hemivertebrae, clinodactyly, syndactyly). In rare cases, it has been described in phenotypically normal individuals.","definition_xrefs":["Orphanet:1445"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ring chromosome disorder","termid":"MONDO:0700091"},{"relation_name":"is_a","term_name":"chromosome 21 disorder","termid":"MONDO:0700124"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring chromosome 21","secondary_identifiers":["NORD:947","SCTID:31325007","GARD:6083","UMLS:C2931422","MEDGEN:419409","MESH:C537109"],"synonyms":[{"name":"Chromosome 21 Ring","type":"exact"},{"name":"R21","type":"related"},{"name":"Ring 21","type":"related"},{"name":"Ring chromosome 21 syndrome","type":"related"},{"name":"Ring chromosome type 21","type":"exact"},{"name":"chromosome 21 en anneau","type":"exact"},{"name":"chromosome 21 ring","type":"related"}],"termid":"MONDO:0015437","xrefs":{"Monarch":{"xref_id":"0015437"}}}


id: PBO:0014269
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital disorders of glycosylation","termid":"PBO:0014269"}


id: PBO:0059680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 46","termid":"PBO:0059680"}


id: MONDO:0035459
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial nephrotic syndrome","termid":"MONDO:0002350"},{"relation_name":"is_a","term_name":"idiopathic nephrotic syndrome","termid":"MONDO:0018170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"idiopathic multidrug-resistant nephrotic syndrome","secondary_identifiers":["UMLS:C5681293","GARD:22287","MEDGEN:1842472","Orphanet:567550","ICD10CM:N04.8"],"termid":"MONDO:0035459","xrefs":{"Monarch":{"xref_id":"0035459"}}}


id: PBO:0031566
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-catalytic_activity_phenotype","termid":"PBO:0031566"}


id: GO:0050442
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glyoxylate + H2O + pentanoyl-CoA = 3-propylmalate + CoA + H+.","definition_xrefs":["RHEA:14457"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, acyl groups converted into alkyl on transfer","termid":"GO:0046912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"3-propylmalate synthase activity","secondary_identifiers":["EC:2.3.3.12","MetaCyc:3-PROPYLMALATE-SYNTHASE-RXN","KEGG_REACTION:R03040"],"synonyms":[{"name":"3-(n-propyl)-malate synthase activity","type":"related"},{"name":"3-propylmalate glyoxylate-lyase (CoA-pentanoylating) activity","type":"related"},{"name":"N-propylmalate synthase activity","type":"related"},{"name":"beta-n-propylmalate synthase activity","type":"related"},{"name":"pentanoyl-CoA:glyoxylate C-pentanoyltransferase (thioester-hydrolysing, 1-carboxybutyl-forming)","type":"related"}],"termid":"GO:0050442"}


id: PBO:0049925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HGF activator","termid":"PBO:0049925"}


id: MONDO:0017658
data:
  {"annotated_genes":["SJAG_04203"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88328],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044330"}]},"cv_name":"mondo","definition":"A neurologic disorder classically characterized by pronounced startle responses to tactile or acoustic stimuli and hypertonia","definition_xrefs":["Wikipedia:Hyperekplexia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04203":null},"genotype_count":0,"is_obsolete":false,"name":"hyperekplexia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:488800","MESH:D000071017","GARD:21281","UMLS:C0234166","Orphanet:306773"],"termid":"MONDO:0017658","terms_by_termid":{"MONDO:0044330":null},"xrefs":{"Monarch":{"xref_id":"0017658"}}}


id: PBO:0069108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 356, pseudogene","termid":"PBO:0069108"}


id: GO:2001280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of unsaturated fatty acid biosynthetic process.","definition_xrefs":["GO:0006636"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of fatty acid biosynthetic process","termid":"GO:0045723"},{"relation_name":"is_a","term_name":"regulation of unsaturated fatty acid biosynthetic process","termid":"GO:2001279"},{"relation_name":"positively_regulates","term_name":"unsaturated fatty acid biosynthetic process","termid":"GO:0006636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of unsaturated fatty acid biosynthetic process","synonyms":[{"name":"positive regulation of fatty acid desaturation","type":"related"},{"name":"positive regulation of polyunsaturated fatty acid biosynthesis","type":"related"},{"name":"positive regulation of unsaturated fatty acid anabolism","type":"exact"},{"name":"positive regulation of unsaturated fatty acid biosynthesis","type":"exact"},{"name":"positive regulation of unsaturated fatty acid formation","type":"exact"},{"name":"positive regulation of unsaturated fatty acid synthesis","type":"exact"}],"termid":"GO:2001280"}


id: MONDO:0032797
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"myopathy, congenital, with tremor","secondary_identifiers":["OMIM:618524","UMLS:C5231401","DOID:0081348","MEDGEN:1684886"],"synonyms":[{"name":"MYOPATHY, CONGENITAL, WITH TREMOR","type":"related"},{"name":"MYOTREM","type":"related"},{"name":"Myogenic Tremor","type":"related"}],"termid":"MONDO:0032797","xrefs":{"Monarch":{"xref_id":"0032797"}}}


id: MONDO:0008784
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autoimmune hemolytic anemia (obsolete MONDO:0008784)","termid":"MONDO:0008784","xrefs":{"Monarch":{"xref_id":"0008784"}}}


id: PBO:0050826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxypyruvate isomerase (putative)","termid":"PBO:0050826"}


id: PBO:0044626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dachsous cadherin-related 1","termid":"PBO:0044626"}


id: PBO:0078830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Pro (anticodon CGG) 1-1","termid":"PBO:0078830"}


id: PBO:0041240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 105","termid":"PBO:0041240"}


id: GO:0003211
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a cardiac ventricle from unspecified parts. A cardiac ventricle receives blood from a cardiac atrium and pumps it out of the heart.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac chamber formation","termid":"GO:0003207"},{"relation_name":"part_of","term_name":"cardiac ventricle morphogenesis","termid":"GO:0003208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac ventricle formation","termid":"GO:0003211"}


id: GO:0170016
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The binding activity of a molecule that brings together an endosome and an ER membrane either via membrane lipid binding or by interacting with an endosome protein, to establish and facilitate organelle exchange.","definition_xrefs":["PMID:33124732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum-organelle membrane tether activity","termid":"GO:0170009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0030674"}],"interesting_parent_ids":["GO:0060090","GO:0030674","GO:0003674"],"is_obsolete":false,"name":"endoplasmic reticulum-endosome tether activity","termid":"GO:0170016"}


id: GO:0072762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a carbendazim stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to carbendazim","termid":"GO:1901597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to carbendazim","termid":"GO:0072762"}


id: PBO:0065939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rac GTPase activating protein 1 pseudogene 1","termid":"PBO:0065939"}


id: MONDO:0850468
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A diffuse large B-cell lymphoma that is categorized as BN2 with high probability by the LymphGen algorithm. This is based on a combination of genetic features and BN2 DLBCLs often, but do not always, have a translocation involving the BCL6 locus and/or some combination of mutations affecting NOTCH2, TNFAIP3, BCL10 and UBE2A. This subgroup also commonly has mutations due to aberrant somatic hypermutation affecting CD70, which can be coding or non-coding.","definition_xrefs":["DOID:0081064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diffuse large B-cell lymphoma","termid":"MONDO:0018905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"BN2 diffuse large B-cell lymphoma","secondary_identifiers":["UMLS:C4725003","MEDGEN:1650982","NCIT:C148395"],"termid":"MONDO:0850468","xrefs":{"Monarch":{"xref_id":"0850468"}}}


id: MONDO:0010251
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic X-linked intellectual disability","termid":"MONDO:0019181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked 50","secondary_identifiers":["MESH:C564713","GARD:22668","DOID:0112029","MEDGEN:376278","OMIM:300115","UMLS:C1848087"],"synonyms":[{"name":"MRX50","type":"exact"},{"name":"intellectual developmental disorder, X-linked 50","type":"exact"},{"name":"intellectual disability, X-linked 50","type":"exact"},{"name":"mental retardation, X-linked 50","type":"related"}],"termid":"MONDO:0010251","xrefs":{"Monarch":{"xref_id":"0010251"}}}


id: MONDO:0001037
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"corneal ulcer","termid":"MONDO:0004577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"ring corneal ulcer","secondary_identifiers":["SCTID:111520007","ICD9:370.02","ICD10CM:H16.02","icd11.foundation:1877531217","MEDGEN:509766","DOID:10444","UMLS:C0155068"],"termid":"MONDO:0001037","xrefs":{"Monarch":{"xref_id":"0001037"}}}


id: PBO:0077997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor associated factor 1","termid":"PBO:0077997"}


id: MONDO:0017645
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare choreic movement disorder (obsolete MONDO:0017645)","secondary_identifiers":["Orphanet:306715"],"termid":"MONDO:0017645","xrefs":{"Monarch":{"xref_id":"0017645"}}}


id: MONDO:0009154
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypothyroidism, congenital, nongoitrous in which the cause of the disease is a mutation in the NKX2-5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypothyroidism, congenital, nongoitrous","termid":"MONDO:0000045"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypothyroidism, congenital, nongoitrous, 5","secondary_identifiers":["MESH:C567123","MEDGEN:388687","OMIM:225250","DOID:0070125","UMLS:C2673630","GARD:15165"],"synonyms":[{"name":"CHNG5","type":"exact"},{"name":"NKX2-5 hypothyroidism, congenital, nongoitrous","type":"exact"},{"name":"congenital nongoitrous hypothyroidism 5","type":"related"},{"name":"hypothyroidism, congenital nongoitrous, 5","type":"exact"},{"name":"hypothyroidism, congenital, nongoitrous caused by mutation in NKX2-5","type":"exact"},{"name":"hypothyroidism, congenital, nongoitrous, 5","type":"exact"},{"name":"hypothyroidism, congenital, nongoitrous, type 5","type":"exact"}],"termid":"MONDO:0009154","xrefs":{"Monarch":{"xref_id":"0009154"}}}


id: FYPO:0004353
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal during S phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during vegetative growth","termid":"FYPO:0001038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0002494","FYPO:0000002","FYPO:0001320","FYPO:0002274"],"is_obsolete":false,"name":"increased protein phosphorylation during mitotic S phase","synonyms":[{"name":"increased protein phosphorylation during mitotic S phase during vegetative growth","type":"exact"},{"name":"increased protein phosphorylation during mitotic S-phase","type":"exact"},{"name":"increased protein/peptide phosphorylation during mitotic S phase","type":"exact"}],"termid":"FYPO:0004353"}


id: PBO:0014299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe sprecific protein","termid":"PBO:0014299"}


id: MONDO:0010682
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete myoclonic epilepsy, progressive, X-linked (obsolete MONDO:0010682)","secondary_identifiers":["OMIM:310370"],"synonyms":[{"name":"myoclonic epilepsy, progressive","type":"exact"}],"termid":"MONDO:0010682","xrefs":{"Monarch":{"xref_id":"0010682"}}}


id: PBO:0063150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POZ/BTB and AT hook containing zinc finger 1","termid":"PBO:0063150"}


id: MONDO:0019411
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Genochondromatosis is characterized by chondromatosis, typically involving the clavicles, upper end of the humerus, and lower end of the femur. Lesions are bilateral and symmetrical. It has been described four patients from the same family and is transmitted as an autosomal dominant trait. Another disorder, genochondromatosis II, shows strong similarities to genochondromatosis but is characterized by the involvement of the short tubular bones and by normal clavicles. It has been described in one unrelated family. Genochondromatosis II may also be inherited as an autosomal dominant trait. Genochondromatosis has a benign clinical course.","definition_xrefs":["Orphanet:85197"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with disorganized development of skeletal components (obsolete MONDO:0019708)","termid":"MONDO:0019708"},{"relation_name":"is_a","term_name":"genochondromatosis","termid":"MONDO:0007653"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genochondromatosis type 1","secondary_identifiers":["icd11.foundation:521879469","GARD:16741","UMLS:C5438970","MEDGEN:1761731"],"termid":"MONDO:0019411","xrefs":{"Monarch":{"xref_id":"0019411"}}}


id: GO:1903206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of hydrogen peroxide-induced cell death.","definition_xrefs":["GOC:TermGenie","PMID:14749723","PMID:24252804","GO_REF:0000058","GOC:PARL","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of hydrogen peroxide-induced cell death (obsolete GO:1903206)","synonyms":[{"name":"down regulation of cell death in response to H2O2","type":"exact"},{"name":"down regulation of cell death in response to hydrogen peroxide","type":"exact"},{"name":"down regulation of hydrogen peroxide-mediated cell death","type":"related"},{"name":"down-regulation of cell death in response to H2O2","type":"exact"},{"name":"down-regulation of cell death in response to hydrogen peroxide","type":"exact"},{"name":"down-regulation of hydrogen peroxide-mediated cell death","type":"related"},{"name":"downregulation of cell death in response to H2O2","type":"exact"},{"name":"downregulation of cell death in response to hydrogen peroxide","type":"exact"},{"name":"downregulation of hydrogen peroxide-mediated cell death","type":"related"},{"name":"inhibition of cell death in response to H2O2","type":"narrow"},{"name":"inhibition of cell death in response to hydrogen peroxide","type":"narrow"},{"name":"inhibition of hydrogen peroxide-mediated cell death","type":"related"},{"name":"negative regulation of cell death in response to H2O2","type":"exact"},{"name":"negative regulation of cell death in response to hydrogen peroxide","type":"exact"},{"name":"negative regulation of hydrogen peroxide-mediated cell death","type":"related"},{"name":"protection against H2O2-induced cell death","type":"related"},{"name":"protection against hydrogen peroxide-induced cell death","type":"related"}],"termid":"GO:1903206"}


id: PBO:0065525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patched 2","termid":"PBO:0065525"}


id: PBO:0028347
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_CENP-A_containing_chromatin","termid":"PBO:0028347"}


id: GO:0008518
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Folate derivative (out) + anion (in) = folate derivative (in) + anion (out). The Reduced Folate Carrier (RCF(SLC19A1) acts by an antiport mechanism. RCF carries several folate derivatives: MTX, PMX, ratitrexed, pralatrexate, 5-methyl THF, and 5-formyl THF.","definition_xrefs":["TC:2.A.48","PMID:24745983","PMID:21568705","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic anion transmembrane transporter activity","termid":"GO:0008509"},{"relation_name":"is_a","term_name":"folic acid transmembrane transporter activity","termid":"GO:0008517"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"folate:monoatomic anion antiporter activity","synonyms":[{"name":"folate:anion antiporter activity","type":"broad"},{"name":"reduced folate carrier activity","type":"related"},{"name":"reduced folate transmembrane transporter activity","type":"related"},{"name":"reduced folate transporter","type":"related"}],"termid":"GO:0008518"}


id: GO:0071820
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an N-box, a DNA motif with the consensus sequence CACNAG that is found in the promoters of genes expressed preferentially at synapses.","definition_xrefs":["GOC:yaf","PMID:11498047"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II cis-regulatory region sequence-specific DNA binding","termid":"GO:0000978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0000976"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003677","GO:0000976"],"is_obsolete":false,"name":"N-box binding","synonyms":[{"name":"N box binding","type":"exact"},{"name":"N-box promoter binding","type":"exact"}],"termid":"GO:0071820"}


id: PBO:0062135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily F member 2 pseudogene","termid":"PBO:0062135"}


id: GO:0033607
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex formed of superoxide dismutase 1 and Bcl-2. Complex formation is thought to link superoxide dismutase to an apoptotic pathway.","definition_xrefs":["PMID:16790527","PMID:15233914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"SOD1-Bcl-2 complex","termid":"GO:0033607"}


id: PBO:0077493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM212 intronic transcript 1","termid":"PBO:0077493"}


id: GO:0099055
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the postsynaptic membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of postsynaptic membrane (obsolete GO:0099055)","termid":"GO:0099055"}


id: GO:0070685
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell projection that forms at the site of macropinocytosis, a form of endocytosis that results in the uptake of relatively large amounts of extracellular fluid. The macropinocytic cup membrane selectively excludes certain proteins, such as H36 or PM4C4 in Dictyostelium, and the underlying cytoskeleton is enriched in F-actin and coronin.","definition_xrefs":["PMID:16968738","PMID:9044041","PMID:12538772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection","termid":"GO:0120025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"macropinocytic cup","synonyms":[{"name":"crown","type":"exact"}],"termid":"GO:0070685"}


id: MONDO:0018861
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An extremely rare mitochondrial disorder characterized by facial dysmorphism similar to that seen in Zellweger syndrome, such as frontal bossing, high forehead, upslanting palpebral fissures, hypoplastic supraorbital ridges, and epicanthal folds, and in addition, pale skin, profound hypotonia, developmental delay, and minor metabolic anomalies. No peroxysomal defects, however, have been reported. Transmission is thought to be autosomal recessive.","definition_xrefs":["Orphanet:50812"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"Zellweger-like syndrome without peroxisomal anomalies","secondary_identifiers":["icd11.foundation:697302760","MEDGEN:930773","GARD:18841","SCTID:718880003","UMLS:C4305104"],"synonyms":[{"name":"AHN-Lerman-Sagie syndrome","type":"exact"}],"termid":"MONDO:0018861","xrefs":{"Monarch":{"xref_id":"0018861"}}}


id: MONDO:0012095
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Intellectual disability-brachydactyly-Pierre Robin syndrome is a rare developmental defect during embryogenesis characterized by mild to moderate intellectual disability and phsychomotor delay, Robin sequence (incl. severe micrognathia and soft palate cleft) and distinct dysmorphic facial features (e.g. synophris, short palpebral fissures, hypertelorism, small, low-set, and posteriorly angulated ears, bulbous nose, long/flat philtrum, and bow-shaped upper lip). Skeletal anomalies, such as brachydactyly, clinodactyly, small hands and feet, and oral manifestations (e.g. bifid, short tongue, oligodontia) are also associated. Additional features reported include microcephaly, capillary hemangiomas on face and scalp, ventricular septal defect, corneal clouding, nystagmus and profound sensorineural deafness.","definition_xrefs":["Orphanet:364577"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome or malformation associated with head and neck malformations (obsolete MONDO:0015501)","termid":"MONDO:0015501"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"intellectual disability-brachydactyly-Pierre Robin syndrome","secondary_identifiers":["MEDGEN:325196","MESH:C563880","OMIM:608670","GARD:17583","UMLS:C1837564"],"synonyms":[{"name":"ROBIN sequence with distinctive facial appearance and brachydactyly","type":"related"}],"termid":"MONDO:0012095","xrefs":{"Monarch":{"xref_id":"0012095"}}}


id: GO:0001900
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates or increases the frequency, rate or extent of cytolysis by that organism of cells in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:tb","GOC:dph","GOC:add"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cytolysis by symbiont of host cells (obsolete GO:0001900)","synonyms":[{"name":"activation by symbiont of cytolysis of host cells","type":"narrow"},{"name":"positive regulation by symbiont of cytolysis of host cells","type":"exact"},{"name":"stimulation by symbiont of cytolysis of host cells","type":"narrow"},{"name":"up regulation by symbiont of cytolysis of host cells","type":"exact"},{"name":"up-regulation by symbiont of cytolysis of host cells","type":"exact"},{"name":"upregulation by symbiont of cytolysis of host cells","type":"exact"}],"termid":"GO:0001900"}


id: FYPO:0000351
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the fungal-type cell wall is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell wall during vegetative growth","termid":"FYPO:0000027"},{"relation_name":"is_a","term_name":"abnormal cell wall morphology","termid":"FYPO:0002947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002946"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002946","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal cell wall morphology during vegetative growth","synonyms":[{"name":"abnormal cell wall morphology during mitotic cell cycle","type":"related"},{"name":"cell wall morphology: abnormal during vegetative growth","type":"related"}],"termid":"FYPO:0000351"}


id: MONDO:0015832
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"True unicornuate uterus is a rare, non-syndromic uterovaginal malformation characterized by a crescent-shaped, small-sized uterus containing a single horn and fallopian tube with no rudimentary horn. Urinary tract anomalies are frequently associated.","definition_xrefs":["Orphanet:180074"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unilateral aplasia of the mullerian ducts","termid":"MONDO:0015831"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"true unicornuate uterus","secondary_identifiers":["icd11.foundation:113532659","MEDGEN:1863468","GARD:20174","UMLS:C5848180"],"synonyms":[{"name":"complete unilateral Mullerian aplasia","type":"exact"},{"name":"complete unilateral Müllerian aplasia","type":"exact"},{"name":"complete unilateral aplasia of the Mullerian ducts","type":"exact"},{"name":"complete unilateral aplasia of the Müllerian ducts","type":"exact"},{"name":"unicornuate uterus without rudimentary horn","type":"exact"}],"termid":"MONDO:0015832","xrefs":{"Monarch":{"xref_id":"0015832"}}}


id: PBO:0056419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARCKS like 1","termid":"PBO:0056419"}


id: GO:0060253
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or decreases the rate or extent of glial cell proliferation.","definition_xrefs":["GOC:sl","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"is_a","term_name":"negative regulation of gliogenesis","termid":"GO:0014014"},{"relation_name":"is_a","term_name":"regulation of glial cell proliferation","termid":"GO:0060251"},{"relation_name":"negatively_regulates","term_name":"glial cell proliferation","termid":"GO:0014009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of glial cell proliferation","termid":"GO:0060253"}


id: GO:0034251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of amides.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"is_a","term_name":"regulation of amide metabolic process","termid":"GO:0034248"},{"relation_name":"regulates","term_name":"amide catabolic process","termid":"GO:0043605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of amide catabolic process","synonyms":[{"name":"regulation of amide breakdown","type":"exact"},{"name":"regulation of amide catabolism","type":"exact"},{"name":"regulation of amide degradation","type":"exact"},{"name":"regulation of cellular amide catabolic process","type":"exact"}],"termid":"GO:0034251"}


id: PR:O43065
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A TATA-binding protein-associated factor 172 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03351","PANTHER:PTHR10799:SF225","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"helicase mot1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1826.01c","secondary_identifiers":["UniProtKB:O43065"],"synonyms":[{"name":"Spom972h-BTAF1","type":"exact"},{"name":"TBP-associated factor mot1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"modifier of transcription 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43065"}


id: GO:0099629
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A network of proteins within and adjacent to the postsynaptic membrane of a symmetric synapse, consisting of anchoring and scaffolding molecules, signaling enzymes and cytoskeletal components that spatially and functionally organize the neurotransmitter receptors at the synapse. This structure is not as thick or electron dense as the postsynaptic densities found in asymmetric synapses.","definition_xrefs":["PMID:18832033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic specialization","termid":"GO:0099572"},{"relation_name":"part_of","term_name":"symmetric synapse","termid":"GO:0032280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"postsynaptic specialization of symmetric synapse","synonyms":[{"name":"postsynaptic density of inhibitory synapse","type":"exact"}],"termid":"GO:0099629"}


id: GO:0048698
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of collateral sprouting in the absence of injury.","definition_xrefs":["GOC:jid","GOC:lm","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of collateral sprouting","termid":"GO:0048671"},{"relation_name":"is_a","term_name":"regulation of collateral sprouting in absence of injury","termid":"GO:0048696"},{"relation_name":"negatively_regulates","term_name":"collateral sprouting in absence of injury","termid":"GO:0048669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of collateral sprouting in absence of injury","synonyms":[{"name":"down regulation of collateral sprouting in the absence of injury","type":"exact"},{"name":"down-regulation of collateral sprouting in the absence of injury","type":"exact"},{"name":"downregulation of collateral sprouting in the absence of injury","type":"exact"},{"name":"inhibition of collateral sprouting in the absence of injury","type":"narrow"}],"termid":"GO:0048698"}


id: MONDO:0019894
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete non-distal monosomy 7p (obsolete MONDO:0019894)","secondary_identifiers":["Orphanet:96136"],"synonyms":[{"name":"non-distal deletion 7p","type":"exact"},{"name":"non-distal monosomy type 7p","type":"exact"},{"name":"non-telomeric monosomy 7p","type":"exact"}],"termid":"MONDO:0019894","xrefs":{"Monarch":{"xref_id":"0019894"}}}


id: PBO:0040494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AU RNA binding methylglutaconyl-CoA hydratase","termid":"PBO:0040494"}


id: PBO:0055902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 25","termid":"PBO:0055902"}


id: GO:0052102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of the host calcium-dependent protein kinase pathway during the host defense response. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by symbiont of defense-related host calcium-dependent protein kinase pathway (obsolete GO:0052102)","synonyms":[{"name":"activation by symbiont of defense-related host calcium-dependent protein kinase pathway","type":"narrow"},{"name":"positive regulation by organism of defense-related calcium-dependent protein kinase pathway in other organism involved in symbiotic interaction","type":"broad"},{"name":"positive regulation of defense-related host CDPK pathway by organism","type":"exact"},{"name":"stimulation by symbiont of defense-related host calcium-dependent protein kinase pathway","type":"narrow"},{"name":"up regulation by symbiont of defense-related host calcium-dependent protein kinase pathway","type":"exact"},{"name":"up-regulation by symbiont of defense-related host calcium-dependent protein kinase pathway","type":"exact"},{"name":"upregulation by symbiont of defense-related host calcium-dependent protein kinase pathway","type":"exact"}],"termid":"GO:0052102"}


id: PBO:0047734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formin binding protein 4","termid":"PBO:0047734"}


id: GO:0008836
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: meso-2,6-diaminopimelate + H+ = L-lysine + CO2.","definition_xrefs":["RHEA:15101","EC:4.1.1.20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"diaminopimelate decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R00451","MetaCyc:DIAMINOPIMDECARB-RXN"],"synonyms":[{"name":"DAP decarboxylase activity","type":"related"},{"name":"DAP-decarboxylase activity","type":"related"},{"name":"diaminopimelic acid decarboxylase activity","type":"related"},{"name":"meso-2,6-diaminoheptanedioate carboxy-lyase (L-lysine-forming)","type":"related"},{"name":"meso-2,6-diaminoheptanedioate carboxy-lyase activity","type":"related"},{"name":"meso-diaminopimelate decarboxylase activity","type":"related"}],"termid":"GO:0008836"}


id: PBO:0070479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 14","termid":"PBO:0070479"}


id: GO:0008613
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action characteristic of a diuretic hormone, a peptide hormone that, upon receptor binding, regulates water balance and fluid secretion.","definition_xrefs":["InterPro:IPR003621","GOC:mah","PMID:8618894"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone activity","termid":"GO:0005179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0098772","GO:0140677","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"diuretic hormone activity","termid":"GO:0008613"}


id: PBO:0090954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Rsd1","termid":"PBO:0090954"}


id: MONDO:0012558
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epiphyseal dysplasia, Baumann type","secondary_identifiers":["MESH:C563664","OMIM:610797","UMLS:C1835830","MEDGEN:322764"],"synonyms":[{"name":"epiphyseal dysplasia, Baumann type","type":"exact"}],"termid":"MONDO:0012558","xrefs":{"Monarch":{"xref_id":"0012558"}}}


id: GO:0140850
data:
  {"annotated_genes":["SJAG_03006","SJAG_02319"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[118073,120728],"is_not":false,"summary":null,"term":"GO:0140850"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a ubiquitin molecule to a histone 2B at the conserved C-terminal lysine (K) residue. The last K residue is at position 119 in fission yeast, 123 in budding yeast, and 120 in mammals.","definition_xrefs":["PMID:28624371","PMID:17363370"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H2B ubiquitin ligase activity","termid":"GO:0141054"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02319":null,"SJAG_03006":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0004842"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0019787"}],"interesting_parent_ids":["GO:0004842","GO:0140096","GO:0016740","GO:0003674","GO:0016746","GO:0019787","GO:0003824"],"is_obsolete":false,"name":"histone H2B C-terminal K residue ubiquitin ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"histone H2B conserved C-terminal lysine ubiquitin ligase activity","type":"exact"},{"name":"histone H2B-K120 ubiquitin ligase activity","type":"exact"},{"name":"histone H2BK120 ubiquitin ligase activity","type":"exact"},{"name":"histone ubiquitin ligase activity (H2B-K120 specific)","type":"exact"}],"termid":"GO:0140850","terms_by_termid":{"GO:0140850":null}}


id: GO:0032867
data:
  {"annotated_genes":["SJAG_04660","SJAG_03958"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97570,103004],"is_not":false,"summary":null,"term":"GO:0032867"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arabitol + NADP+ = L-arabinose + NADPH + H+.","definition_xrefs":["PMID:12724380","PMID:15184173","RHEA:25229"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldose reductase (NADPH) activity","termid":"GO:0004032"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03958":null,"SJAG_04660":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"L-arabinose reductase (NADPH) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-8772","SABIO-RK:1858","KEGG_REACTION:R01759"],"synonyms":[{"name":"L-arabinose:NADP reductase activity","type":"exact"},{"name":"arabinose reductase activity","type":"broad"},{"name":"arabinose:NADP reductase activity","type":"broad"}],"termid":"GO:0032867","terms_by_termid":{"GO:0032867":null}}


id: GO:0046758
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A form of viral release in which the nucleocapsid evaginates from the host Golgi membrane system, resulting in envelopment of the virus and cell lysis.","definition_xrefs":["ISBN:0072370319"],"gene_count":0,"genotype_count":0,"name":"obsolete lytic virus budding from Golgi membrane (obsolete GO:0046758)","synonyms":[{"name":"lytic Golgi membrane viral budding","type":"exact"},{"name":"lytic viral budding from Golgi membrane","type":"exact"},{"name":"lytic virus budding from Golgi membrane","type":"exact"}],"termid":"GO:0046758"}


id: PBO:0057387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548bb","termid":"PBO:0057387"}


id: MONDO:0016833
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"14q12 microdeletion syndrome is a recently described syndrome characterized by severe intellectual deficit, with a normal neonatal period, followed by a phase of regression at the age of 3-6 months.","definition_xrefs":["Orphanet:261144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 14","termid":"MONDO:0016912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"14q12 microdeletion syndrome","secondary_identifiers":["MEDGEN:930909","SCTID:719574007","UMLS:C4305240","GARD:20771"],"synonyms":[{"name":"Del(14)(q12)","type":"exact"},{"name":"monosomy 14q12","type":"exact"}],"termid":"MONDO:0016833","xrefs":{"Monarch":{"xref_id":"0016833"}}}


id: MONDO:0014265
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Alzheimer disease in which the cause of the disease is a mutation in the ADAM10 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Alzheimer disease","termid":"MONDO:0004975"},{"relation_name":"is_a","term_name":"hereditary dementia","termid":"MONDO:0015547"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0005559"],"is_obsolete":false,"name":"Alzheimer disease 18","secondary_identifiers":["DOID:0110050","OMIM:615590","MEDGEN:816371","UMLS:C3810041"],"synonyms":[{"name":"AD18","type":"exact"},{"name":"ADAM10 Alzheimer disease","type":"exact"},{"name":"Alzheimer disease 18","type":"exact"},{"name":"Alzheimer disease 18, late-onset","type":"related"},{"name":"Alzheimer disease 18, susceptibility to","type":"related"},{"name":"Alzheimer disease caused by mutation in ADAM10","type":"exact"},{"name":"Alzheimer disease type 18","type":"exact"},{"name":"Alzheimer's disease 18","type":"exact"},{"name":"Alzheimer's disease type 18","type":"exact"}],"termid":"MONDO:0014265","xrefs":{"Monarch":{"xref_id":"0014265"}}}


id: MONDO:0020160
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete secondary entropion (obsolete MONDO:0020160)","secondary_identifiers":["Orphanet:98569"],"termid":"MONDO:0020160","xrefs":{"Monarch":{"xref_id":"0020160"}}}


id: PBO:0028240
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_nucleus","termid":"PBO:0028240"}


id: PBO:0002816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone lysine methyltransferase Set3","termid":"PBO:0002816"}


id: GO:0010913
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of sterigmatocystin biosynthesis. Sterigmatocystin biosynthetic processes are the chemical reactions and pathways resulting in the formation of sterigmatocystin, a carcinogenic mycotoxin produced in high yields by strains of the common molds.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"sterigmatocystin biosynthetic process","termid":"GO:0045461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"regulation of sterigmatocystin biosynthetic process","termid":"GO:0010913"}


id: PBO:0045651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox A pseudogene 9","termid":"PBO:0045651"}


id: GO:0047659
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,2-dihydrosantonin + NAD(P)+ = alpha-santonin + NAD(P)H + H+.","definition_xrefs":["MetaCyc:ALPHA-SANTONIN-12-REDUCTASE-RXN","EC:1.3.1.47"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"alpha-santonin 1,2-reductase activity","synonyms":[{"name":"1,2-dihydrosantonin:NAD(P)+ 1,2-oxidoreductase activity","type":"related"},{"name":"a-santonin 1,2-reductase activity","type":"exact"}],"termid":"GO:0047659"}


id: GO:0061846
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of the neuronal cytoplasm located in dendritic spines.","definition_xrefs":["PMID:15673667"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendrite cytoplasm","termid":"GO:0032839"},{"relation_name":"part_of","term_name":"dendritic spine","termid":"GO:0043197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"dendritic spine cytoplasm","termid":"GO:0061846"}


id: GO:0044050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance released via rupture of symbiont sporangia, structures producing and containing spores. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["MITRE:tk"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via substance released by sporangium lysis (obsolete GO:0044050)","synonyms":[{"name":"interaction with host via substance released by lysis of symbiont sporangium","type":"related"},{"name":"interaction with host via substance released by sporangia lysis","type":"exact"}],"termid":"GO:0044050"}


id: PBO:0055635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3074","termid":"PBO:0055635"}


id: GO:0032760
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tumor necrosis factor production.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:15560120","PMID:10891884"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tumor necrosis factor production","termid":"GO:0032680"},{"relation_name":"is_a","term_name":"positive regulation of tumor necrosis factor superfamily cytokine production","termid":"GO:1903557"},{"relation_name":"positively_regulates","term_name":"tumor necrosis factor production","termid":"GO:0032640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of tumor necrosis factor production","secondary_identifiers":["GO:1904469","GO:0042535"],"synonyms":[{"name":"activation of tumor necrosis factor production","type":"narrow"},{"name":"positive regulation of TNF production","type":"exact"},{"name":"positive regulation of TNF secretion","type":"narrow"},{"name":"positive regulation of TNF-alpha production","type":"exact"},{"name":"positive regulation of cachectin secretion","type":"narrow"},{"name":"positive regulation of tumor necrosis factor biosynthesis","type":"narrow"},{"name":"positive regulation of tumor necrosis factor biosynthetic process","type":"narrow"},{"name":"positive regulation of tumor necrosis factor formation","type":"narrow"},{"name":"positive regulation of tumor necrosis factor secretion","type":"narrow"},{"name":"positive regulation of tumor necrosis factor-alpha production","type":"exact"},{"name":"stimulation of tumor necrosis factor production","type":"narrow"},{"name":"up regulation of tumor necrosis factor production","type":"exact"},{"name":"up-regulation of tumor necrosis factor production","type":"exact"},{"name":"upregulation of tumor necrosis factor production","type":"exact"}],"termid":"GO:0032760"}


id: GO:0010746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of plasma membrane long-chain fatty acid transport. Plasma membrane long-chain fatty acid transport is the directed movement of long-chain fatty acids across the plasma membrane. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmembrane transport","termid":"GO:0034762"},{"relation_name":"is_a","term_name":"regulation of long-chain fatty acid import into cell","termid":"GO:0140212"},{"relation_name":"regulates","term_name":"long-chain fatty acid import across plasma membrane","termid":"GO:0015911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"regulation of long-chain fatty acid import across plasma membrane","synonyms":[{"name":"regulation of plasma membrane long-chain fatty acid transport","type":"exact"}],"termid":"GO:0010746"}


id: MONDO:0100121
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital myopathy in which the cause of the disease is a mutation in the SCN4A gene. It include is a spectrum of autosomal recessive disorders including congenital myasthenic syndrome, fetal hypokinesia, and congenital myopathy.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0006025"],"is_obsolete":false,"name":"SCN4A-related myopathy, autosomal recessive","synonyms":[{"name":"SCN4A-related myopathy, autosomal recessive","type":"exact"},{"name":"congenital myopathy with \"corona\" fibers, selective muscle atrophy, and craniosynostosis","type":"exact"},{"name":"congenital myopathy with severe fetal hypokinesia","type":"exact"},{"name":"congenital myopathy with severe foetal hypokinesia","type":"exact"},{"name":"myopathy with ptosis and mild dystrophic pattern","type":"exact"}],"termid":"MONDO:0100121","xrefs":{"Monarch":{"xref_id":"0100121"}}}


id: PBO:0057081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR181A2 host gene","termid":"PBO:0057081"}


id: MONDO:0007290
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cataract (disease) in which the cause of the disease is a mutation in the HSF4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset non-syndromic cataract","termid":"MONDO:0011060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 5 multiple types","secondary_identifiers":["UMLS:C0266537","OMIM:116800","DOID:0110255","MESH:C535342","MEDGEN:78608"],"synonyms":[{"name":"CTRCT5","type":"exact"},{"name":"HSF4 cataract (disease)","type":"exact"},{"name":"cataract (disease) caused by mutation in HSF4","type":"exact"},{"name":"cataract 5, multiple types","type":"related"},{"name":"cataract, Marner type","type":"related"},{"name":"cataract, lamellar","type":"related"}],"termid":"MONDO:0007290","xrefs":{"Monarch":{"xref_id":"0007290"}}}


id: PBO:0053863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1138","termid":"PBO:0053863"}


id: GO:1990585
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trans-4-hydroxy-L-prolyl-[protein] + UDP-beta-L-arabinofuranose = H+ + O-(beta-L-arabinofuranosyl)-trans-4-hydroxy-L-prolyl-[protein] + UDP.","definition_xrefs":["PMID:24036508","RHEA:49472"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"hydroxyproline O-arabinosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-15011","EC:2.4.2.58"],"synonyms":[{"name":"HPAT","type":"exact"}],"termid":"GO:1990585"}


id: PBO:0065538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylserine synthase 2","termid":"PBO:0065538"}


id: MONDO:1012682
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinal disorder characterized by multiple areas of retinal degeneration that occurs in dogs due to a C(73)T stop mutation in the BEST1 gene.","definition_xrefs":["PMID:17460247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal degeneration, non-human animal","termid":"MONDO:1010326"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multifocal retinopathy 1, BEST1-related, dog","secondary_identifiers":["OMIA:001444-9615"],"synonyms":[{"name":"CMR1","type":"exact"},{"name":"multifocal retinopathy 1, dog","type":"related"}],"termid":"MONDO:1012682","xrefs":{"Monarch":{"xref_id":"1012682"}}}


id: MONDO:0800039
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any MELAS syndromein which the cause of the disease is a mutation in the MTND5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MELAS syndrome","termid":"MONDO:0010789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"MELAS syndrome caused by mutation in MTND5","synonyms":[{"name":"MTND5 MELAS syndrome","type":"exact"}],"termid":"MONDO:0800039","xrefs":{"Monarch":{"xref_id":"0800039"}}}


id: MOD:00529
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation","definition_xrefs":["RESID:AA0151#var","Unimod:161"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"Hex3HexNAc2P1 N4-glycosylated asparagine","synonyms":[{"name":"Hex(3)HexNAc(2)P(1)","type":"related"},{"name":"Hex3HexNAc2P1","type":"related"}],"termid":"MOD:00529"}


id: PBO:0046214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 7","termid":"PBO:0046214"}


id: PBO:0074350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"somatomedin B domain containing 1, pseudogene","termid":"PBO:0074350"}


id: MONDO:0014427
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cone-rod dystrophy in which the cause of the disease is a mutation in the POC1B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cone-rod dystrophy","termid":"MONDO:0015993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cone-rod dystrophy 20","secondary_identifiers":["UMLS:C4014856","DOID:0111026","MEDGEN:863293","GARD:16036","OMIM:615973"],"synonyms":[{"name":"CORD20","type":"exact"},{"name":"POC1B cone-rod dystrophy","type":"exact"},{"name":"cone-rod dystrophy 20","type":"exact"},{"name":"cone-rod dystrophy caused by mutation in POC1B","type":"exact"},{"name":"cone-rod dystrophy type 20","type":"exact"}],"termid":"MONDO:0014427","xrefs":{"Monarch":{"xref_id":"0014427"}}}


id: GO:0070743
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is composed of an interleukin-23 alpha (p19, product of the IL23A gene) and an interleukin-12 beta (p40, product of the IL12B gene) subunit and is secreted into the extracellular space.","definition_xrefs":["GOC:add","PMID:11114383","PMID:15999093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"extracellular space","termid":"GO:0005615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005576","GO:0032991"],"is_obsolete":false,"name":"interleukin-23 complex","synonyms":[{"name":"IL-23 complex","type":"exact"},{"name":"IL12B","type":"narrow"},{"name":"IL23A","type":"narrow"},{"name":"p19","type":"narrow"},{"name":"p40","type":"narrow"}],"termid":"GO:0070743"}


id: PBO:0085611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in DNA mismatch repair and meiotic recombination; involved in crossing-over during meiotic recombination; forms a complex with Mlh1p; mammalian homolog is implicated mammalian microsatellite instability","termid":"PBO:0085611"}


id: PBO:0053192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine zipper and EF-hand containing transmembrane protein 1","termid":"PBO:0053192"}


id: GO:1900176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of a nodal signaling pathway, where the nodal signaling pathway is involved in determination of left/right asymmetry in the lateral mesoderm.","definition_xrefs":["PMID:15084459","GOC:TermGenie","GOC:vk","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry (obsolete GO:1900176)","synonyms":[{"name":"down-regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"downregulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"inhibition of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"narrow"},{"name":"negative regulation of nodal signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"}],"termid":"GO:1900176"}


id: SO:0002385
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A 5' UTR variant within an upstream open reading frame.","definition_xrefs":["PMID:32461616","PMID:32926138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5_prime_UTR_variant","termid":"SO:0001623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5_prime_UTR_uORF_variant","termid":"SO:0002385"}


id: MONDO:0021909
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete aplasia cutis congenita recessive (obsolete MONDO:0021909)","termid":"MONDO:0021909","xrefs":{"Monarch":{"xref_id":"0021909"}}}


id: GO:2001015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of skeletal muscle cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of skeletal muscle cell differentiation","termid":"GO:2001014"},{"relation_name":"negatively_regulates","term_name":"skeletal muscle cell differentiation","termid":"GO:0035914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of skeletal muscle cell differentiation","termid":"GO:2001015"}


id: FYPO:0006525
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which sister kinetochores of a replicated chromosome separate prematurely when the population in which the cell is found is in stationary phase.","definition_xrefs":["PMID:11598020","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"premature sister kinetochore separation during stationary phase","synonyms":[{"name":"split kinetochores during stationary phase","type":"related"}],"termid":"FYPO:0006525"}


id: PBO:0057348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 543","termid":"PBO:0057348"}


id: GO:0060500
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the branching morphogenesis by which the initial primordium of the lung is formed.","definition_xrefs":["GOC:mtg_lung","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in lung bud formation (obsolete GO:0060500)","termid":"GO:0060500"}


id: MOD:01514
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Modifications that have monoisotopic mass differences from their respective origins that are nominally equal (sometimes called isobaric) at a resolution below 0.01 Da.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modifications with monoisotopic mass differences that are nominally equal at a resolution below 0.1 Da","termid":"MOD:01513"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modifications with monoisotopic mass differences that are nominally equal at a resolution below 0.01 Da","termid":"MOD:01514"}


id: PBO:0034347
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-capable_of_upregulating_or_causing_pathological_process","termid":"PBO:0034347"}


id: MONDO:0017683
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"homocystinuria without methylmalonic aciduria","termid":"MONDO:0018964"},{"relation_name":"is_a","term_name":"methylmalonic aciduria and/or homocystinuria, cblD type","termid":"MONDO:0100463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002280","MONDO:0005570","MONDO:0004736","MONDO:0006025"],"is_obsolete":false,"name":"methylcobalamin deficiency type cblDv1","secondary_identifiers":["MEDGEN:1826168","GARD:17385","UMLS:C5679956","Orphanet:308380"],"synonyms":[{"name":"functional methionine synthase deficiency type cblDv1","type":"exact"}],"termid":"MONDO:0017683","xrefs":{"Monarch":{"xref_id":"0017683"}}}


id: MONDO:0008760
data:
  {"annotated_genes":["SJAG_00413"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88830],"is_not":false,"summary":null,"term":"MONDO:0008760"}]},"cv_name":"mondo","definition":"Beta-ketothiolase (T2) deficiency is a rare organic aciduria affecting ketone body metabolism and the catabolism of isoleucine and characterized by intermittent ketoacidotic episodes associated with vomiting, dyspnea, tachypnoea, hypotonia, lethargy and coma, with an onset during infancy or toddlerhood and usually ceasing by adolescence.","definition_xrefs":["Orphanet:134"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"classic organic aciduria","termid":"MONDO:0019215"},{"relation_name":"is_a","term_name":"inborn disorder of ketolysis","termid":"MONDO:0019229"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00413":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0006025","MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"beta-ketothiolase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C535434","NANDO:2200493","GARD:872","OMIM:203750","UMLS:C1536500","NANDO:1200987","MEDGEN:280689","DOID:14723","NCIT:C98841"],"synonyms":[{"name":"2-Methyl-3-hydroxybutyric acidemia","type":"related"},{"name":"2-methyl-3-hydroxybutyricacidemia","type":"exact"},{"name":"3-Ktd deficiency","type":"related"},{"name":"3-ketothiolase deficiency","type":"exact"},{"name":"3-oxothiolase deficiency","type":"exact"},{"name":"ALPHA-methylacetoacetic aciduria","type":"related"},{"name":"Alpha methylacetoacetic aciduria","type":"exact"},{"name":"Alpha-methyl-acetoacetyl-CoA thiolase deficiency","type":"exact"},{"name":"BKT","type":"exact"},{"name":"Beta ketothiolase deficiency","type":"related"},{"name":"Mat deficiency","type":"related"},{"name":"T2 deficiency","type":"exact"},{"name":"alpha-methylacetoaceticaciduria","type":"exact"},{"name":"beta-ketothiolase deficiency","type":"exact"},{"name":"mitochondrial acetoacetyl-CoA thiolase deficiency","type":"exact"},{"name":"mitochondrial acetoacetyl-Coa thiolase deficiency","type":"related"},{"name":"mitochondrial acetoacetyl-coenzyme A thiolase deficiency","type":"exact"},{"name":"peroxisomal thiolase deficiency","type":"exact"}],"termid":"MONDO:0008760","terms_by_termid":{"MONDO:0008760":null},"xrefs":{"Monarch":{"xref_id":"0008760"}}}


id: PR:Q9UTE0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sey1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTE0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein sey1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC222.14c","synonyms":[{"name":"Spom972h-sey1","type":"exact"}],"termid":"PR:Q9UTE0"}


id: PATO:0002368
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A viviparous organism having never given birth.","definition_xrefs":["PATOC:mf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parity","termid":"PATO:0002370"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nulliparous","termid":"PATO:0002368"}


id: GO:0042330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell or organism in response to an external stimulus.","definition_xrefs":["ISBN:0192801023","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"locomotion","termid":"GO:0040011"},{"relation_name":"part_of","term_name":"response to external stimulus","termid":"GO:0009605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"taxis","secondary_identifiers":["Wikipedia:Taxis"],"synonyms":[{"name":"directed movement in response to stimulus","type":"exact"}],"termid":"GO:0042330"}


id: PBO:0086663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified based on comparison to related yeast species; mCherry fusion protein localizes to the vacuole","termid":"PBO:0086663"}


id: PBO:0054833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2247","termid":"PBO:0054833"}


id: PBO:0051104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1-17 (pseudogene)","termid":"PBO:0051104"}


id: PBO:0066625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RIC8 guanine nucleotide exchange factor B","termid":"PBO:0066625"}


id: PBO:0066147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBBP4 pseudogene 3","termid":"PBO:0066147"}


id: GO:0031428
data:
  {"annotated_genes":["SJAG_02377","SJAG_00943","SJAG_02350","SJAG_00744","SJAG_03410"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72524,75026,77174,78146,112043],"is_not":false,"summary":null,"term":"GO:0031428"}]},"cv_name":"cellular_component","definition":"A ribonucleoprotein complex containing a box C/D type RNA that is capable of ribose-2'-O-methylation of target RNAs. Box C/D type RNAs are widespread in eukaryotes and in Archaea, suggesting that an RNA-based guide mechanism for directing specific RNA 2'-O-ribose methylations was present in the common ancestor of Archaea and Eukarya.","definition_xrefs":["PMID:17284456","ISBN:0879695897","PMID:11842104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"box C/D RNP complex","termid":"GO:0170049"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00744":null,"SJAG_00943":null,"SJAG_02350":null,"SJAG_02377":null,"SJAG_03410":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"box C/D methylation guide snoRNP complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"box C/D sRNP complex","type":"narrow"},{"name":"box C/D small nucleolar ribonucleoprotein complex","type":"narrow"},{"name":"box C/D snoRNP complex","type":"narrow"},{"name":"box C/D snoRNP ribose 2'-O methylase complex","type":"exact"},{"name":"box C/D snoRNP ribose-2'-O-methyltransferase complex","type":"narrow"}],"termid":"GO:0031428","terms_by_termid":{"GO:0031428":null}}


id: PBO:0036030
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-incomplete_septum","termid":"PBO:0036030"}


id: MONDO:0003216
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from glandular epithelial cells of the ureter","direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"},{"relation_name":"is_a","term_name":"ureter carcinoma","termid":"MONDO:0006481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ureter adenocarcinoma","secondary_identifiers":["MEDGEN:234456","NCIT:C6155","UMLS:C1336873","DOID:4938"],"synonyms":[{"name":"adenocarcinoma of the ureter","type":"exact"},{"name":"adenocarcinoma of ureter","type":"exact"},{"name":"ureter adenocarcinoma","type":"exact"},{"name":"ureteral adenocarcinoma","type":"exact"}],"termid":"MONDO:0003216","xrefs":{"Monarch":{"xref_id":"0003216"}}}


id: PATO:0000606
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000606 absolute angle value (obsolete PATO:0000606)","termid":"PATO:0000606"}


id: PBO:0049473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"granzyme H","termid":"PBO:0049473"}


id: SO:0001777
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant that has arisen after splitting of the embryo, resulting in the variant being found in only some of the tissues or cells of the body.","direct_ancestors":[{"relation_name":"is_a","term_name":"variant_origin","termid":"SO:0001762"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"somatic_variant","synonyms":[{"name":"somatic variant","type":"exact"}],"termid":"SO:0001777"}


id: PBO:0116302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Leucine-zipper transcriptional activator; regulates the sulfur amino acid pathway; requires different combinations of auxiliary factors Cbf1p, Met28p, Met31p and Met32p; specific involvement in sulfur starvation-induced autophagy with Gcn4p; feedforward loop exists in the regulation of genes controlled by Met4p and Met32p; ubiquitinated by SCF-Met30p, leading to either degradation or maintenance in an inactive state; regulates degradation of its DNA-binding cofactors by SCF-Met30p targeting","termid":"PBO:0116302"}


id: FYPO:0003619
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mRNA splicing via the spliceosome is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA splicing","termid":"FYPO:0003468"},{"relation_name":"is_a","term_name":"normal RNA metabolic process","termid":"FYPO:0004850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal mRNA splicing, via spliceosome","synonyms":[{"name":"normal mRNA splicing, via spliceosome during mitotic cell cycle","type":"related"},{"name":"normal mRNA splicing, via spliceosome during vegetative growth","type":"exact"},{"name":"normal nuclear mRNA splicing, via spliceosome","type":"exact"}],"termid":"FYPO:0003619"}


id: MONDO:0003904
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell lung carcinoma detectable by sputum cytology only. The primary tumor is undetectable radiographically or during bronchoscopy; therefore, it can not be assessed.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"squamous cell lung carcinoma","termid":"MONDO:0005097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"lung occult squamous cell carcinoma","secondary_identifiers":["MEDGEN:235400","NCIT:C6686","DOID:6510","UMLS:C1335100"],"synonyms":[{"name":"occult squamous cell carcinoma of lung","type":"related"},{"name":"occult squamous cell carcinoma of the lung","type":"exact"},{"name":"occult squamous cell lung carcinoma","type":"exact"}],"termid":"MONDO:0003904","xrefs":{"Monarch":{"xref_id":"0003904"}}}


id: GO:0035023
data:
  {"annotated_genes":["SJAG_04462"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73283],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035024"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Rho protein signal transduction.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of small GTPase mediated signal transduction","termid":"GO:0051056"},{"relation_name":"regulates","term_name":"Rho protein signal transduction","termid":"GO:0007266"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04462":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of Rho protein signal transduction","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0035023","terms_by_termid":{"GO:0035024":null}}


id: PBO:0028765
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_autophosphorylation_during_cellular_response_to_DNA_damage","termid":"PBO:0028765"}


id: MONDO:0017013
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Trisomy 8p is a rare chromosomal anomaly syndrome, resulting from the partial duplication of the short arm of chromosome 8, with highly variable phenotype ranging from no dysmorphic features and only mild intellectual disability to patients with severe developmental delay, neonatal hypotonia, short stature, profound intellectual disability, mild dysmorphic features (e.g. mild ptosis, hypertelorism, down-slanting palpebral fissures, broad nasal bridge, short, prominent philtrum, abnormal dentition) and structural brain abnormalities. Autism, epilepsy, and spastic paraplegia have also been reported.","definition_xrefs":["Orphanet:264450"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of the short arm of chromosome 8","termid":"MONDO:0016945"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trisomy 8p","secondary_identifiers":["MESH:C538019","GARD:20920","UMLS:C0795825","MEDGEN:167072"],"synonyms":[{"name":"Duplication 8p","type":"exact"},{"name":"trisomy type 8p","type":"exact"}],"termid":"MONDO:0017013","xrefs":{"Monarch":{"xref_id":"0017013"}}}


id: GO:1990147
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a talin, a family of related cytoskeletal proteins that play a role in assembly of actin filaments and migration of various cell types.","definition_xrefs":["PMID:23372168","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal protein binding","termid":"GO:0008092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674","GO:0008092"],"is_obsolete":false,"name":"talin binding","termid":"GO:1990147"}


id: MONDO:0004057
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infiltrating bladder transitional cell carcinoma exhibiting micropapillary growth pattern. -- 2003","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infiltrating bladder urothelial carcinoma","termid":"MONDO:0003890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"micropapillary variant infiltrating bladder urothelial carcinoma","secondary_identifiers":["UMLS:C1517579","MEDGEN:273397","NCIT:C27202","DOID:6976"],"synonyms":[{"name":"infiltrating bladder urothelial carcinoma, micropapillary variant","type":"exact"}],"termid":"MONDO:0004057","xrefs":{"Monarch":{"xref_id":"0004057"}}}


id: GO:0006630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete lipid binding (obsolete GO:0006630)","synonyms":[{"name":"lipid binding","type":"exact"}],"termid":"GO:0006630"}


id: PBO:0075511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal peptidase complex subunit 2 pseudogene 2","termid":"PBO:0075511"}


id: FYPO:0001863
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which leptomycin B binding by a gene product does not occur. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"},{"relation_name":"is_a","term_name":"abolished molecular function","termid":"FYPO:0005446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"abolished leptomycin B binding","synonyms":[{"name":"abolished LMB binding","type":"exact"},{"name":"leptomycin B binding abolished","type":"exact"}],"termid":"FYPO:0001863"}


id: MONDO:0005692
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cat scratch disease is an infectious illness caused by the bacteria bartonella (Bartonella henselae). It is believed to be transmitted by cat scratches, bites, or exposure to cat saliva. This self-limiting infectious diseaseis characterized by a bump or blister at the site of the bite or scratch and swelling and pain in the lymph nodes. Other features may include fatigue, headache, achiness, and fever. Although cat-scratch disease usually subsides without treatment, antibiotic and/or antimicrobial therapy may help speed recovery.","direct_ancestors":[{"relation_name":"is_a","term_name":"lymphadenitis","termid":"MONDO:0002052"},{"relation_name":"is_a","term_name":"bartonellosis","termid":"MONDO:0005664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"cat-scratch disease","secondary_identifiers":["Orphanet:50839","GARD:27","ICD10CM:A28.1","SCTID:79974007","DOID:11258","UMLS:C0007361","EFO:0007195","ICD9:078.3","icd11.foundation:2003001085","MedDRA:10007729","MESH:D002372","MEDGEN:2861","NCIT:C84620"],"synonyms":[{"name":"Cat scratch disease","type":"related"},{"name":"Cat-scratch fever","type":"exact"},{"name":"Foshay-Mollaret Cat scratch fever","type":"exact"},{"name":"bartonellosis due to Bartonella henselae infection","type":"exact"},{"name":"benign lymphoreticulosis","type":"exact"},{"name":"cat scratch fever","type":"exact"},{"name":"debre's syndrome","type":"exact"},{"name":"debre-Mollaret syndrome","type":"exact"}],"termid":"MONDO:0005692","xrefs":{"Monarch":{"xref_id":"0005692"}}}


id: MONDO:1012628
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked form of progressive retinal atrophy that occurs in dogs due to a mutation in the RPGR gene and is characterized by normal photoreceptor morphogenesis, after which progressive rod–cone degeneration develops in the peripheral retina, gradually advancing toward the optic disc.","definition_xrefs":["PMID:32176262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"progressive retinal atrophy, dog","termid":"MONDO:1012226"},{"relation_name":"is_a","term_name":"X-linked disease, non-human animal","termid":"MONDO:1012575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked progressive retinal atrophy 1, RPGR-related, dog","secondary_identifiers":["OMIA:000831-9615"],"synonyms":[{"name":"XLPRA1","type":"exact"},{"name":"progressive retinal atrophy, X-linked, type 1, dog","type":"related"}],"termid":"MONDO:1012628","xrefs":{"Monarch":{"xref_id":"1012628"}}}


id: PBO:0068718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4atac small nuclear 7, pseudogene","termid":"PBO:0068718"}


id: PBO:0040207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASTN2 antisense RNA 1","termid":"PBO:0040207"}


id: GO:0071380
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a prostagladin E stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to prostaglandin E","termid":"GO:0034695"},{"relation_name":"is_a","term_name":"cellular response to prostaglandin stimulus","termid":"GO:0071379"},{"relation_name":"is_a","term_name":"cellular response to alcohol","termid":"GO:0097306"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to prostaglandin E stimulus","termid":"GO:0071380"}


id: PBO:0028156
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_doxorubicin_level","termid":"PBO:0028156"}


id: PBO:0028735
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_L-ergothioneine_level_during_vegetative_growth","termid":"PBO:0028735"}


id: PBO:0052034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"junctional sarcoplasmic reticulum protein 1","termid":"PBO:0052034"}


id: MONDO:0000135
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Kenny-Caffey syndrome (obsolete MONDO:0000135)","termid":"MONDO:0000135","xrefs":{"Monarch":{"xref_id":"0000135"}}}


id: PBO:0044615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDB1 and CUL4 associated factor 17","termid":"PBO:0044615"}


id: GO:0005875
data:
  {"annotated_genes":["SJAG_05185","SJAG_03673","SJAG_04841","SJAG_01546","SJAG_00397","SJAG_04412","SJAG_04745","SJAG_00697","SJAG_00594","SJAG_02807","SJAG_00140","SJAG_01613","SJAG_00113","SJAG_02286","SJAG_01837","SJAG_00930","SJAG_02561","SJAG_02651","SJAG_01370","SJAG_01739","SJAG_00773","SJAG_01297","SJAG_02336","SJAG_00332","SJAG_01662"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[96582,99083,106366,106694],"is_not":false,"summary":null,"term":"GO:0005875"},{"annotations":[111055,78652,113743,75229],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032133"},{"annotations":[81496,67236,79100,92797,67427],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005868"},{"annotations":[97020,78392,112903,82201,69089],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005869"},{"annotations":[75583,90764,98574,77682],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005871"},{"annotations":[110084,105703],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016938"},{"annotations":[101028],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005872"},{"annotations":[110092,105711],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005873"}]},"cv_name":"cellular_component","definition":"Any multimeric complex connected to a microtubule.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"microtubule cytoskeleton","termid":"GO:0015630"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00113":null,"SJAG_00140":null,"SJAG_00332":null,"SJAG_00397":null,"SJAG_00594":null,"SJAG_00697":null,"SJAG_00773":null,"SJAG_00930":null,"SJAG_01297":null,"SJAG_01370":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_01662":null,"SJAG_01739":null,"SJAG_01837":null,"SJAG_02286":null,"SJAG_02336":null,"SJAG_02561":null,"SJAG_02651":null,"SJAG_02807":null,"SJAG_03673":null,"SJAG_04412":null,"SJAG_04745":null,"SJAG_04841":null,"SJAG_05185":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0015630","GO:0032991"],"is_obsolete":false,"name":"microtubule associated complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000024":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0005875","terms_by_termid":{"GO:0005868":null,"GO:0005869":null,"GO:0005871":null,"GO:0005872":null,"GO:0005873":null,"GO:0005875":null,"GO:0016938":null,"GO:0032133":null}}


id: PBO:0075129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein U4/U6.U5 subunit 27","termid":"PBO:0075129"}


id: PBO:0080736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WWP1 antisense RNA 1","termid":"PBO:0080736"}


id: MONDO:0012900
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial isolated restrictive cardiomyopathy in which the cause of the disease is a mutation in the TNNT2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial restrictive cardiomyopathy","termid":"MONDO:0016340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"cardiomyopathy, familial restrictive, 3","secondary_identifiers":["MEDGEN:382807","UMLS:C2676271","MESH:C567316","DOID:0111427","OMIM:612422","GARD:18072"],"synonyms":[{"name":"RCM3","type":"related"},{"name":"TNNT2 familial isolated restrictive cardiomyopathy","type":"exact"},{"name":"cardiomyopathy, familial restrictive, 3","type":"exact"},{"name":"cardiomyopathy, familial restrictive, type 3","type":"exact"},{"name":"familial isolated restrictive cardiomyopathy caused by mutation in TNNT2","type":"exact"}],"termid":"MONDO:0012900","xrefs":{"Monarch":{"xref_id":"0012900"}}}


id: FYPO:0002440
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin cable distribution is abnormal. The process normally establishes the spatial arrangement of actin cables within the cell. Actin cables are parallel actin filament bundles nucleated by formin, and are the most common form of actin filament bundles found in yeasts.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cable organization","termid":"FYPO:0002030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0004803","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal actin cable distribution","synonyms":[{"name":"abnormal actin cable distribution during mitotic cell cycle","type":"related"},{"name":"abnormal actin cable distribution during vegetative growth","type":"exact"},{"name":"abnormal actin cable localization","type":"related"},{"name":"abnormal formin-nucleated actin cable distribution","type":"exact"}],"termid":"FYPO:0002440"}


id: FYECO:0000418
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which leucine was completely excluded from the experimental medium/buffer.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping absent","termid":"FYECO:0000120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine absent","termid":"FYECO:0000418"}


id: MONDO:0006027
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A synovial sarcoma (disease) that involves the breast.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast sarcoma","termid":"MONDO:0002490"},{"relation_name":"is_a","term_name":"synovial sarcoma","termid":"MONDO:0010434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"breast synovial sarcoma","synonyms":[{"name":"breast synovial sarcoma (disease)","type":"exact"}],"termid":"MONDO:0006027","xrefs":{"Monarch":{"xref_id":"0006027"}}}


id: PBO:0077975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon CGC) 3-1","termid":"PBO:0077975"}


id: PBO:0089011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin/importin beta family nuclear export signal receptor Crm1","termid":"PBO:0089011"}


id: PBO:0035983
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_phosphorylation_during_vegetative_growth","termid":"PBO:0035983"}


id: GO:2001266
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any Roundabout signaling pathway that is involved in axon guidance.","definition_xrefs":["PMID:14527427","PMID:21820427","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Roundabout signaling pathway","termid":"GO:0035385"},{"relation_name":"part_of","term_name":"axon guidance","termid":"GO:0007411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"Roundabout signaling pathway involved in axon guidance","synonyms":[{"name":"ROBO signaling pathway involved in axon chemotaxis","type":"related"},{"name":"ROBO signaling pathway involved in axon growth cone guidance","type":"related"},{"name":"ROBO signaling pathway involved in axon guidance","type":"exact"},{"name":"ROBO signaling pathway involved in axon pathfinding","type":"exact"},{"name":"ROBO/SLIT signaling pathway involved in axon chemotaxis","type":"related"},{"name":"ROBO/SLIT signaling pathway involved in axon growth cone guidance","type":"related"},{"name":"ROBO/SLIT signaling pathway involved in axon guidance","type":"exact"},{"name":"ROBO/SLIT signaling pathway involved in axon pathfinding","type":"exact"},{"name":"Roundabout signaling pathway involved in axon chemotaxis","type":"related"},{"name":"Roundabout signaling pathway involved in axon growth cone guidance","type":"related"},{"name":"Roundabout signaling pathway involved in axon pathfinding","type":"exact"},{"name":"Roundabout signalling pathway involved in axon chemotaxis","type":"related"},{"name":"Roundabout signalling pathway involved in axon growth cone guidance","type":"related"},{"name":"Roundabout signalling pathway involved in axon guidance","type":"exact"},{"name":"Roundabout signalling pathway involved in axon pathfinding","type":"exact"}],"termid":"GO:2001266"}


id: PBO:0049909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HEXA antisense RNA 1","termid":"PBO:0049909"}


id: PBO:0034105
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_synology_relationship_with","termid":"PBO:0034105"}


id: PBO:0090870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, iron ion","termid":"PBO:0090870"}


id: PBO:0002315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (guanine) methyltransferase Trm5 (predicted)","termid":"PBO:0002315"}


id: GO:0052384
data:
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id: PR:Q7LKZ7
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id: PBO:0072173
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id: GO:0140769
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id: PBO:0082593
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id: PBO:0080802
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id: PBO:0079675
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id: PBO:0041968
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id: PBO:0042961
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id: GO:0051726
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id: MONDO:0018475
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id: PBO:0066172
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBIS pseudogene 5","termid":"PBO:0066172"}


id: PBO:0003794
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Esf2 (predicted)","termid":"PBO:0003794"}


id: MONDO:0019356
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urogenital tract malformation","secondary_identifiers":["ICD10CM:Q60-Q64","GARD:19029","Orphanet:83001"],"termid":"MONDO:0019356","xrefs":{"Monarch":{"xref_id":"0019356"}}}


id: PBO:0042210
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin J pseudogene 1","termid":"PBO:0042210"}


id: PBO:0059172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myelin protein zero like 3","termid":"PBO:0059172"}


id: PBO:0062053
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily W member 1","termid":"PBO:0062053"}


id: GO:0033941
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->2)-alpha-D- and (1->6)-alpha-D- linkages in mannan, releasing D-mannose.","definition_xrefs":["EC:3.2.1.137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-mannosidase activity","termid":"GO:0004559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"mannan exo-1,2-1,6-alpha-mannosidase activity","secondary_identifiers":["MetaCyc:3.2.1.137-RXN"],"synonyms":[{"name":"1,2-1,6-alpha-D-mannan D-mannohydrolase activity","type":"related"},{"name":"exo-1,2-1,6-alpha-mannosidase activity","type":"related"}],"termid":"GO:0033941"}


id: PBO:0049065
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 82","termid":"PBO:0049065"}


id: PBO:0079352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TUB antisense RNA 1","termid":"PBO:0079352"}


id: GO:0001501
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton).","definition_xrefs":["GOC:jid","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system development","termid":"GO:0048731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal system development","synonyms":[{"name":"skeletal development","type":"exact"}],"termid":"GO:0001501"}


id: GO:0060176
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of aggregation during sorocarp development. Aggregation involved in sorocarp development is the process whose specific outcome is the progression of the aggregate over time, from its formation to the point when a slug is formed. Aggregate development begins in response to starvation and continues by the chemoattractant-mediated movement of cells toward each other. The aggregate is a multicellular structure that gives rise to the slug.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to nutrient levels","termid":"GO:0032107"},{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of cellular response to stress","termid":"GO:0080135"},{"relation_name":"regulates","term_name":"aggregation involved in sorocarp development","termid":"GO:0031152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of aggregation involved in sorocarp development","termid":"GO:0060176"}


id: PR:Q9P795
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- air1 gene.","definition_xrefs":["UniProtKB:Q9P795","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein air1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP35G2.08c","synonyms":[{"name":"Spom972h-air1","type":"exact"}],"termid":"PR:Q9P795"}


id: SO:0001507
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A collection of one or more sequences of an individual.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_part","term_name":"sequence_alteration","termid":"SO:0001059"},{"relation_name":"is_a","term_name":"sequence_collection","termid":"SO:0001260"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variant_collection","synonyms":[{"name":"variant collection","type":"related"}],"termid":"SO:0001507"}


id: MONDO:0015923
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of peripheral neuropathy that is acquired during the lifetime of the individual.","definition_xrefs":["MONDO:patterns/acquired"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral neuropathy","termid":"MONDO:0005244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"acquired peripheral neuropathy","secondary_identifiers":["MEDGEN:1842976","UMLS:C5680596","Orphanet:182086","GARD:20243"],"synonyms":[{"name":"acquired peripheral neuropathy","type":"exact"}],"termid":"MONDO:0015923","xrefs":{"Monarch":{"xref_id":"0015923"}}}


id: GO:0016701
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  {"annotated_genes":["SJAG_00519","SJAG_00309","SJAG_03225"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[59178],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010308"},{"annotations":[73130],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010309"},{"annotations":[91650],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102672"},{"annotations":[68219],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016702"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and molecular oxygen is incorporated into a donor.","definition_xrefs":["EC:1.13.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00309":null,"SJAG_00519":null,"SJAG_03225":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-9020251","Reactome:R-HSA-9025995","Reactome:R-HSA-9026405","Reactome:R-HSA-9018859","Reactome:R-HSA-9020282","Reactome:R-HSA-9025996","Reactome:R-HSA-9025999","Reactome:R-HSA-9020277","Reactome:R-HSA-9020264","Reactome:R-HSA-9027607","Reactome:R-HSA-9027624","Reactome:R-HSA-9027628","Reactome:R-HSA-9027633","Reactome:R-HSA-9028255","Reactome:R-HSA-9020278","Reactome:R-HSA-9026005","Reactome:R-HSA-9027627","Reactome:R-HSA-9018894","Reactome:R-HSA-9027532","Reactome:R-HSA-9018858","Reactome:R-HSA-2161951","Reactome:R-HSA-9018863","Reactome:R-HSA-9020261","Reactome:R-HSA-9020259","Reactome:R-HSA-9020255","Reactome:R-HSA-9024997","Reactome:R-HSA-9020256"],"synonyms":[{"name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, miscellaneous","type":"narrow"},{"name":"oxygenase","type":"broad"}],"termid":"GO:0016701","terms_by_termid":{"GO:0010308":null,"GO:0010309":null,"GO:0016702":null,"GO:0102672":null}}


id: PR:Q09886
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug42 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09886"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 42 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC584.12","synonyms":[{"name":"Spom972h-mug42","type":"exact"}],"termid":"PR:Q09886"}


id: GO:0043053
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Entry into the facultative diapause of the dauer (enduring) larval stage of nematode development.","definition_xrefs":["PMID:10077613","GOC:kmv","GOC:cab1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"entry into diapause","termid":"GO:0055115"},{"relation_name":"part_of","term_name":"dauer larval development","termid":"GO:0040024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dauer entry","synonyms":[{"name":"nematode entry into dormancy","type":"exact"}],"termid":"GO:0043053"}


id: MONDO:0006946
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Abnormalities of bone mineral metabolism associated with chronic kidney disease.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary hyperparathyroidism of renal origin","termid":"MONDO:0001530"},{"relation_name":"is_a","term_name":"rickets","termid":"MONDO:0005520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"renal osteodystrophy","secondary_identifiers":["SCTID:16726004","DOID:13068","ICD9:588.0","MEDGEN:20524","ICD10CM:N25.0","MedDRA:10038489","EFO:1001152","UMLS:C0035086","MESH:D012080"],"synonyms":[{"name":"Osteodystrophies, renal","type":"related"},{"name":"osteodystrophy, renal","type":"related"},{"name":"renal Osteodystrophies","type":"related"},{"name":"renal rickets","type":"exact"},{"name":"rickets, renal","type":"related"}],"termid":"MONDO:0006946","xrefs":{"Monarch":{"xref_id":"0006946"}}}


id: MOD:00348
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  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-alanine residue to N-carbamoyl-L-alanine.","definition_xrefs":["RESID:AA0343","PubMed:12203680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-alanine residue","termid":"MOD:00901"},{"relation_name":"is_a","term_name":"alpha-aminocarbamoylated residue","termid":"MOD:01679"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-carbamoyl-L-alanine","synonyms":[{"name":"(S)-2-(carbamoylamino)propanoic acid","type":"exact"},{"name":"2-ureidopropanoic acid","type":"exact"},{"name":"MOD_RES N-carbamoylalanine","type":"exact"},{"name":"N-carbamoyl-L-alanine","type":"exact"},{"name":"N-carbamylalanine","type":"exact"},{"name":"N2CbmAla","type":"exact"}],"termid":"MOD:00348"}


id: GO:0019151
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-galactose + NAD+ = D-galactono-1,4-lactone + NADH + H+.","definition_xrefs":["EC:1.1.1.48"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"galactose 1-dehydrogenase activity","secondary_identifiers":["MetaCyc:GALACTODEHYDROG-RXN","RHEA:21296"],"synonyms":[{"name":"D-galactose 1-dehydrogenase activity","type":"exact"},{"name":"D-galactose dehydrogenase activity","type":"related"},{"name":"D-galactose:NAD+ 1-oxidoreductase activity","type":"related"},{"name":"NAD-dependent D-galactose dehydrogenase activity","type":"related"},{"name":"beta-galactose dehydrogenase activity","type":"related"}],"termid":"GO:0019151"}


id: GO:0099534
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The directed change of presynaptic cytosolic free calcium ion concentration in the cytosol via the reversible binding of calcium ions to calcium-binding proteins in the cytosol thereby modulating the spatial and temporal dynamics of changes in presynaptic cytosolic calcium concentrations.","definition_xrefs":["PMID:24442513","PMID:26190970"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium ion binding involved in regulation of cytosolic calcium ion concentration","termid":"GO:0099510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0046872"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0046872"],"is_obsolete":false,"name":"calcium ion binding involved in regulation of presynaptic cytosolic calcium ion concentration","synonyms":[{"name":"calcium ion binding involved in regulation of presynaptic cytosolic calcium levels","type":"exact"},{"name":"presynaptic calcium ion buffering","type":"exact"},{"name":"regulation of presynaptic cytosolic calcium ion concentration by calcium ion buffering","type":"exact"}],"termid":"GO:0099534"}


id: GO:0005050
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete peroxisome receptor (obsolete GO:0005050)","synonyms":[{"name":"peroxisome receptor","type":"exact"}],"termid":"GO:0005050"}


id: PBO:0088557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER farnesyl pyrophosphate synthetase Erg20","termid":"PBO:0088557"}


id: GO:1902121
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to lithocholic acid.","definition_xrefs":["GOC:bf","GOC:TermGenie","PMID:20371703"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid binding","termid":"GO:0005496"},{"relation_name":"is_a","term_name":"bile acid binding","termid":"GO:0032052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0008289","GO:0003674"],"is_obsolete":false,"name":"lithocholic acid binding","synonyms":[{"name":"LCA binding","type":"exact"}],"termid":"GO:1902121"}


id: PBO:0013818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABC1 kinase family protein, implicted in mitochondrial ergosterol and phospholipd homeostasis","termid":"PBO:0013818"}


id: MONDO:1012413
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neonatal pancytopenia, non-human animal","termid":"MONDO:1011702"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neonatal pancytopenia, cattle","secondary_identifiers":["OMIA:001539-9913"],"termid":"MONDO:1012413","xrefs":{"Monarch":{"xref_id":"1012413"}}}


id: FYPO:0005573
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which nuclear transport is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport","termid":"FYPO:0001720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"abnormal nuclear transport","synonyms":[{"name":"nuclear transport: abnormal","type":"related"}],"termid":"FYPO:0005573"}


id: GO:0033772
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3',5'-unsubstituted flavanone + 2 O2 + 2 reduced [NADPH--hemoprotein reductase] = a 3',5'-dihydroxyflavanone + 2 H+ + 2 H2O + 2 oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:55448"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"flavonoid 3',5'-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-13192","EC:1.14.14.81"],"synonyms":[{"name":"F3',5'H","type":"related"},{"name":"F3'5'H","type":"related"},{"name":"flavanone,NADPH:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0033772"}


id: SO:0002043
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A Y-RNA primary transcript that also encodes pre-miR sequence that is processed to form functionally active miRNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_part","term_name":"pre_miRNA","termid":"SO:0001244"},{"relation_name":"is_a","term_name":"Y_RNA_primary_transcript","termid":"SO:0002042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"miR_encoding_Y_RNA_primary_transcript","synonyms":[{"name":"miR encoding Y-RNA primary transcript","type":"exact"}],"termid":"SO:0002043"}


id: FYPO:0005422
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is inviable and elongated, has a nucleus that is broken into multiple small fragments, and progression through the mitotic cell cycle is arrested in interphase during a cellular response to ultraviolet light. The cell contains no septum.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated cell with fragmented nucleus and mitotic cell cycle arrest in interphase","termid":"FYPO:0004197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0002403"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001320","FYPO:0001985","FYPO:0000004","FYPO:0000002","FYPO:0005447","FYPO:0000005","FYPO:0002403"],"is_obsolete":false,"name":"inviable elongated cell with fragmented nucleus and mitotic cell cycle arrest in interphase during cellular response to UV","synonyms":[{"name":"elongated inviable cell with fragmented nucleus and mitotic cell cycle arrest in interphase during cellular response to UV during vegetative growth","type":"exact"},{"name":"elongated inviable vegetative cell with fragmented nucleus and mitotic cell cycle arrest in interphase during cellular response to UV","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell with fragmented nucleus and cell cycle arrest in mitotic interphase during cellular response to UV","type":"exact"},{"name":"inviable elongated vegetative cell with fragmented nuclear DNA and mitotic cell cycle arrest in interphase during cellular response to UV","type":"related"},{"name":"inviable elongated vegetative cell with fragmented nucleus and cell cycle arrest in interphase during cellular response to UV during mitotic cell cycle","type":"related"},{"name":"inviable elongated vegetative cell with fragmented nucleus and mitotic cell cycle arrest in interphase during cellular response to UV","type":"exact"},{"name":"inviable elongated vegetative cell with fragmented nucleus and mitotic interphase arrest during cellular response to UV","type":"exact"},{"name":"lethal; elongated vegetative cell with fragmented nucleus and mitotic cell cycle arrest in interphase during cellular response to UV","type":"exact"},{"name":"mitotic cell cycle arrest in interphase and elongated inviable cell with fragmented nucleus during cellular response to UV","type":"exact"},{"name":"mitotic interphase arrested elongated inviable vegetative cell during cellular response to UV","type":"exact"}],"termid":"FYPO:0005422"}


id: PBO:0066091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RASA3 intronic transcript 1","termid":"PBO:0066091"}


id: GO:0036000
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A small subcellular vesicle, surrounded by a membrane, in the pellicle of ciliate protozoans that discharges a mucus-like secretion.","definition_xrefs":["PMID:4629881","GOC:mag","PMID:10723937"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule","termid":"GO:0030141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"mucocyst","termid":"GO:0036000"}


id: PBO:0072326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 12","termid":"PBO:0072326"}


id: GO:0110059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of blood vessel endothelial cell differentiation.","definition_xrefs":["GOC:BHF_miRNA","GOC:rph","PMID:23072816","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of endothelial cell differentiation","termid":"GO:0045602"},{"relation_name":"is_a","term_name":"regulation of blood vessel endothelial cell differentiation","termid":"GO:0110057"},{"relation_name":"negatively_regulates","term_name":"blood vessel endothelial cell differentiation","termid":"GO:0060837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of blood vessel endothelial cell differentiation","termid":"GO:0110059"}


id: PBO:0074678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 62","termid":"PBO:0074678"}


id: PBO:0042049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 106","termid":"PBO:0042049"}


id: MOD:01528
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue with the Applied Biosystems iTRAQ8plex-113 reporter+balance group.","definition_xrefs":["Unimod:730"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(13)C isotope tagged reagent","termid":"MOD:01428"},{"relation_name":"is_a","term_name":"(15)N isotope tagged reagent","termid":"MOD:01429"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent acylated residue","termid":"MOD:01526"},{"relation_name":"is_a","term_name":"modifications with monoisotopic mass differences that are nominally equal at 304.205359 Da","termid":"MOD:01591"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-113 reporter+balance reagent acylated residue","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Representative mass and accurate mass for 113, 114, 116 & 117","type":"related"},{"name":"iTRAQ8plex","type":"related"},{"name":"iTRAQ8plex:13C(7)15N(1)","type":"related"}],"termid":"MOD:01528"}


id: MONDO:0056797
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with midbrain and hindbrain malformations","secondary_identifiers":["OMIM:617523","UMLS:C4479613","MEDGEN:1385580","DOID:0080312"],"synonyms":[{"name":"NEDMHM","type":"exact"},{"name":"neurodevelopmental disorder with midbrain and hindbrain malformations","type":"exact"}],"termid":"MONDO:0056797","xrefs":{"Monarch":{"xref_id":"0056797"}}}


id: PBO:0052458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kruppel like factor 7 pseudogene 1","termid":"PBO:0052458"}


id: MONDO:0043786
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of a serous membrane.","definition_xrefs":["NCIT:C70428"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serositis","secondary_identifiers":["UMLS:C0036749","MEDGEN:20711","SCTID:370469003","MESH:D012700"],"synonyms":[{"name":"Serositides","type":"related"},{"name":"inflammation of serous membrane","type":"exact"},{"name":"serositis","type":"exact"},{"name":"serous membrane inflammation","type":"exact"}],"termid":"MONDO:0043786","xrefs":{"Monarch":{"xref_id":"0043786"}}}


id: GO:0008388
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: reduced [NADPH-hemoprotein reductase] + O2 + a steroid = oxidized [NADPH-hemoprotein reductase] + H2O + H+ + 15alpha-hydroxy steroid.","definition_xrefs":["RHEA:83179","PMID:2703500"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hydroxylase activity","termid":"GO:0008395"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"steroid 15-alpha-hydroxylase activity","synonyms":[{"name":"cytochrome P450 CYP2A4","type":"narrow"}],"termid":"GO:0008388"}


id: PBO:0027065
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-RNA_transport_phenotype","termid":"PBO:0027065"}


id: PBO:0053889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1169","termid":"PBO:0053889"}


id: GO:0006100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving intermediates of the tricarboxylic acid cycle.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete tricarboxylic acid cycle intermediate metabolic process (obsolete GO:0006100)","synonyms":[{"name":"Krebs cycle intermediate metabolic process","type":"exact"},{"name":"Krebs cycle intermediate metabolism","type":"exact"},{"name":"TCA intermediate metabolic process","type":"exact"},{"name":"TCA intermediate metabolism","type":"exact"},{"name":"citric acid cycle intermediate metabolic process","type":"exact"},{"name":"citric acid cycle intermediate metabolism","type":"exact"},{"name":"tricarboxylic acid cycle intermediate metabolic process","type":"exact"},{"name":"tricarboxylic acid cycle intermediate metabolism","type":"exact"}],"termid":"GO:0006100"}


id: PBO:0090884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator complex tRNA uridine(34) acetyltransferase subunit Elp3","termid":"PBO:0090884"}


id: FYPO:0006842
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosomes containing the histone H3 variant CenH3 (also called CENP-A; Cnp1 in S. pombe) are assembled over a normal (i.e. indistinguishable from wild type) portion of the centromeric region of the chromosome. CENP-A-containing nucleosomes are assembled into chromatin around centromeres, encompassing the central core and centromeric inner repeat regions.","definition_xrefs":["GO:0000729","PMID:28904333","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal chromatin organization","termid":"FYPO:0007940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal spatial extent of CENP-A containing nucleosome assembly","synonyms":[{"name":"normal extent of CENP-A containing nucleosome","type":"related"},{"name":"normal spatial extent of CENP-A containing nucleosome assembly at centromere","type":"exact"},{"name":"normal spatial extent of CENP-A containing nucleosome assembly during mitotic cell cycle","type":"related"},{"name":"normal spatial extent of CENP-A containing nucleosome assembly during vegetative growth","type":"exact"},{"name":"normal spatial extent of CENP-A deposition","type":"related"},{"name":"normal spatial extent of CENP-A loading","type":"related"},{"name":"normal spatial extent of CenH3-containing nucleosome assembly at centromere","type":"related"},{"name":"normal spatial extent of DNA replication-independent nucleosome assembly at centromere","type":"exact"},{"name":"normal spatial extent of centromere-specific histone exchange","type":"exact"},{"name":"normal spatial extent of centromere-specific nucleosome assembly","type":"exact"},{"name":"normal spatial extent of centromeric DNA replication-independent nucleosome assembly","type":"exact"}],"termid":"FYPO:0006842"}


id: PBO:0045368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthamide biosynthesis 3 pseudogene 1","termid":"PBO:0045368"}


id: PBO:0076859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 9","termid":"PBO:0076859"}


id: PBO:0082857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Core component of transport protein particle (TRAPP) complexes I-III; TRAPP complexes are related multimeric guanine nucleotide-exchange factors for the GTPase Ypt1p, regulating ER-Golgi traffic (TRAPPI), intra-Golgi traffic (TRAPPII), endosome-Golgi traffic (TRAPPII and III) and autophagy (TRAPPIII); human homology TRAPPC1 complements yeast null mutant","termid":"PBO:0082857"}


id: PBO:0089384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperone for translation factor EF2, Armadillo-type fold, Hgh1","termid":"PBO:0089384"}


id: PBO:0001228
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pheochromocytoma","termid":"PBO:0001228"}


id: GO:0140132
data:
  {"annotated_genes":["SJAG_00532"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94781],"is_not":false,"summary":null,"term":"GO:0140132"}]},"cv_name":"molecular_function","definition":"Binding to an iron-sulfur cluster and delivering it to an acceptor molecule.","definition_xrefs":["PMID:22966982","PMID:29051382"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metallochaperone activity","termid":"GO:0016530"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00532":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140104"}],"interesting_parent_ids":["GO:0003674","GO:0140104"],"is_obsolete":false,"name":"iron-sulfur cluster chaperone activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"iron-sulfur cluster carrier activity","type":"exact"}],"termid":"GO:0140132","terms_by_termid":{"GO:0140132":null}}


id: GO:1904501
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of chromatin-mediated maintenance of transcription.","definition_xrefs":["GO_REF:0000058","GOC:BHF_telomere","GOC:BHF","PMID:22723415","GOC:nc","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of chromatin-mediated maintenance of transcription (obsolete GO:1904501)","synonyms":[{"name":"activation of chromatin-mediated maintenance of transcription","type":"narrow"},{"name":"up regulation of chromatin-mediated maintenance of transcription","type":"exact"},{"name":"up-regulation of chromatin-mediated maintenance of transcription","type":"exact"},{"name":"upregulation of chromatin-mediated maintenance of transcription","type":"exact"}],"termid":"GO:1904501"}


id: PBO:0062712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily I member 2","termid":"PBO:0062712"}


id: FYPO:0003469
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which small nuclear RNA (snRNA) splicing is normal (i.e. indistinguishable from wild type). All snRNA splicing may be normal, or one splicing of or more specific snRNA molecules may be specifically assayed.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA splicing","termid":"FYPO:0003468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000294","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal snRNA splicing","synonyms":[{"name":"normal snRNA splicing during mitotic cell cycle","type":"related"},{"name":"normal snRNA splicing during vegetative growth","type":"exact"}],"termid":"FYPO:0003469"}


id: PBO:0082234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-glucosidase; weak, but broad substrate specificity for alpha-1,4- and alpha-1,6-glucosides; member of IMA isomaltase family; not required for isomaltose utilization, but Ima4p overexpression allows the ima1 null mutant to grow on isomaltose; identical to IMA3","termid":"PBO:0082234"}


id: GO:0031162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of exogenous sulfur into a metallo-sulfur cluster.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete sulfur incorporation into metallo-sulfur cluster (obsolete GO:0031162)","synonyms":[{"name":"sulphur incorporation into metallo-sulphur cluster","type":"exact"}],"termid":"GO:0031162"}


id: FYECO:0000421
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which (R,Z)-10-hydroxyoctadec-8-enoic acid was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ (8E,10S)-10-hydroxy-8-octadecenoic acid","synonyms":[{"name":"+ (R,Z)-10-hydroxyoctadec-8-enoic acid","type":"exact"}],"termid":"FYECO:0000421"}


id: GO:0050337
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: thiosulfate + 2 glutathione = glutathione disulfide + hydrogen sulfide + sulfite + 2 H+.","definition_xrefs":["RHEA:14505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfurtransferase activity","termid":"GO:0016783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016782","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"thiosulfate-thiol sulfurtransferase activity","secondary_identifiers":["MetaCyc:THIOSULFATE--THIOL-SULFURTRANSFERASE-RXN","EC:2.8.1.3","Reactome:R-HSA-1655879"],"synonyms":[{"name":"glutathione-dependent thiosulfate reductase activity","type":"related"},{"name":"sulfane reductase activity","type":"related"},{"name":"sulfane sulfurtransferase activity","type":"related"},{"name":"thiosulfate:thiol sulfurtransferase activity","type":"related"},{"name":"thiosulphate-thiol sulphurtransferase activity","type":"exact"}],"termid":"GO:0050337"}


id: PBO:0029457
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-small_vacuoles_present_in_increased_numbers","termid":"PBO:0029457"}


id: GO:0098017
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The part of the viral capsid that comprises the most common capsomere type. For example, in a T=3 icosahedral capsid, which is composed of 12 pentameric and 20 hexameric capsomeres, the hexameric capsomeres are major subunits.","definition_xrefs":["GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"capsomere","termid":"GO:0046727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"viral capsid, major subunit","synonyms":[{"name":"major capsomere","type":"exact"},{"name":"major head protein","type":"related"}],"termid":"GO:0098017"}


id: PBO:0080078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 40","termid":"PBO:0080078"}


id: MONDO:0010101
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Teebi-Shaltout syndrome is a rare, genetic, development defect during embryogenesis malformation syndrome characterized by association of characteristic facial features (including abnormal head shape with narrow forehead, hypertelorism, telecanthus, small earlobes, broad nasal bridge and tip, underdeveloped ala nasi, small/wide mouth and high/cleft palate), ectodermal dysplasia (including oligodontia with delayed dentition, slow growing hair and reduced sweating) and skeletal abnormalities including camptodactyly and caudal appendage. Short stature and abnormal palmar creases are additional clinical features.","definition_xrefs":["Orphanet:3291"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Teebi-Shaltout syndrome","secondary_identifiers":["OMIM:272950","UMLS:C1848912","GARD:5125","MEDGEN:376472","MESH:C536950"],"synonyms":[{"name":"TBSH","type":"related"},{"name":"Teebi Shaltout syndrome","type":"related"},{"name":"Teebi-Shaltout syndrome","type":"exact"},{"name":"craniofacial anomalies, abnormal hair, camptodactyly, and caudal appendage","type":"related"}],"termid":"MONDO:0010101","xrefs":{"Monarch":{"xref_id":"0010101"}}}


id: PATO:0001847
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's being drawn together, compressed or squeezed physically.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"constricted","secondary_identifiers":["PATO:0001837"],"synonyms":[{"name":"stenosis","type":"exact"},{"name":"stenotic","type":"exact"},{"name":"stricture","type":"exact"}],"termid":"PATO:0001847"}


id: MONDO:1010986
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hydrocephalus that occurs in tiger.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrocephalus, non-human animal","termid":"MONDO:1010233"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrocephalus, tiger","secondary_identifiers":["OMIA:000487-9694"],"termid":"MONDO:1010986","xrefs":{"Monarch":{"xref_id":"1010986"}}}


id: MONDO:1012232
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary adenomatosis, non-human animal","termid":"MONDO:1011927"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary adenomatosis, cattle","secondary_identifiers":["OMIA:000840-9913"],"termid":"MONDO:1012232","xrefs":{"Monarch":{"xref_id":"1012232"}}}


id: GO:0031357
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the chloroplast inner membrane consisting of the gene products having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of chloroplast inner membrane (obsolete GO:0031357)","synonyms":[{"name":"integral to chloroplast inner membrane","type":"narrow"}],"termid":"GO:0031357"}


id: PBO:0017757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WIP family cytoskeletal protein Bbc1 (predicted)","termid":"PBO:0017757"}


id: PBO:0044078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystatin like 1","termid":"PBO:0044078"}


id: MONDO:0017144
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete alpha-thalassemia and related diseases (obsolete MONDO:0017144)","secondary_identifiers":["Orphanet:275745"],"termid":"MONDO:0017144","xrefs":{"Monarch":{"xref_id":"0017144"}}}


id: MONDO:0007020
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute neurological disorder characterized by the triad of ophthalmoplegia, ataxia, and disturbances of mental activity or consciousness. Eye movement abnormalities include nystagmus, external rectus palsies, and reduced conjugate gaze. thiamine deficiency and chronic alcoholism are associated conditions. Pathologic features include periventricular petechial hemorrhages and neuropil breakdown in the diencephalon and brainstem. Chronic thiamine deficiency may lead to korsakoff syndrome. (Adams et al., Principles of Neurology, 6th ed, pp1139-42; Davis & Robertson, Textbook of Neuropathology, 2nd ed, pp452-3)","definition_xrefs":["MESH:D014899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"},{"relation_name":"is_a","term_name":"alcohol-related disorders","termid":"MONDO:0021698"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wernicke encephalopathy","secondary_identifiers":["MEDGEN:53073","Orphanet:97354","UMLS:C0043121","icd11.foundation:1360335041","ICD9:265.1","DOID:2384","SCTID:21007002","ICD10CM:E51.2"],"synonyms":[{"name":"Wernicke's disease","type":"exact"},{"name":"Wernicke's encephalopathy","type":"exact"},{"name":"dementia due to thiamine deficiency","type":"exact"}],"termid":"MONDO:0007020","xrefs":{"Monarch":{"xref_id":"0007020"}}}


id: MONDO:0001064
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute form of otosalpingitis.","definition_xrefs":["MONDO:patterns/acute"],"direct_ancestors":[{"relation_name":"is_a","term_name":"otosalpingitis","termid":"MONDO:0002172"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute eustachian salpingitis","secondary_identifiers":["DOID:10550","ICD10CM:H68.01","SCTID:194268005","UMLS:C0155429","ICD9:381.51","MEDGEN:509961"],"synonyms":[{"name":"acute eustachian tube salpingitis","type":"exact"},{"name":"acute otosalpingitis","type":"exact"},{"name":"otosalpingitis, acute","type":"exact"}],"termid":"MONDO:0001064","xrefs":{"Monarch":{"xref_id":"0001064"}}}


id: GO:0075232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates, maintains or increases the frequency, rate or extent of spore movement on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of spore movement on or near host (obsolete GO:0075232)","termid":"GO:0075232"}


id: PBO:0083774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential nuclear envelope integral membrane protein; interacts with chromatin, helping to maintain normal chromatin architecture and transcriptional regulation of certain loci at the nuclear envelope; interacts and functions with Apq12p and Brl1p in lipid homeostasis; mutants are defective in nuclear pore complex biogenesis, nuclear envelope morphology, mRNA nuclear export, and are sensitive to sterol biosynthesis inhibitors and membrane fluidizing agents; homologous to Brl1p","termid":"PBO:0083774"}


id: MONDO:0000830
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Waldenstroem's macroglobulinemia (obsolete MONDO:0000830)","termid":"MONDO:0000830","xrefs":{"Monarch":{"xref_id":"0000830"}}}


id: MONDO:0015639
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Benign partial epilepsy with secondarily generalized seizures in infancy is a rare infantile epilepsy syndrome characterized by seizures presenting with motion arrest and staring. They are followed by generalized tonic-clonic convulsions with normal interictal EEG and focal paroxysmal discharges, followed by generalization in ictal EEG. Seizures usually occur in clusters and are responsive to treatment. Psychomotor development is normal.","definition_xrefs":["Orphanet:166302"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign non-familial infantile seizures","termid":"MONDO:0015637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"benign partial epilepsy with secondarily generalized seizures in infancy","secondary_identifiers":["GARD:20073","icd11.foundation:413225821","MEDGEN:1656339","UMLS:C4749728"],"termid":"MONDO:0015639","xrefs":{"Monarch":{"xref_id":"0015639"}}}


id: PBO:0085173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-mannosylated heat shock protein; secreted and covalently attached to the cell wall via beta-1,3-glucan and disulfide bridges; required for cell wall stability; induced by heat shock, oxidative stress, and nitrogen limitation; HSP150 has a paralog, PIR3, that arose from the whole genome duplication","termid":"PBO:0085173"}


id: SO:0001772
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant that has been found to cause disease.","direct_ancestors":[{"relation_name":"is_a","term_name":"variant_phenotype","termid":"SO:0001769"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disease_causing_variant","synonyms":[{"name":"disease causing variant","type":"exact"}],"termid":"SO:0001772"}


id: PBO:0088656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein, chaperone for V-type ATPase, BIG1 family","termid":"PBO:0088656"}


id: PBO:0046608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K9, member 10","termid":"PBO:0046608"}


id: PBO:0001405
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"targets correlated with Clr3 and Sir2 targets","termid":"PBO:0001405"}


id: MONDO:1010771
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bullous pemphigoid that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bullous pemphigoid, non-human animal","termid":"MONDO:1010137"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bullous pemphigoid, pig","secondary_identifiers":["OMIA:001183-9823"],"termid":"MONDO:1010771","xrefs":{"Monarch":{"xref_id":"1010771"}}}


id: PBO:0083598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame unlikely to encode a functional protein; expression if heat-inducible; located in promoter region of essential CCT3 gene encoding a subunit of the cytosolic chaperonin Cct ring complex, overlaps ORF YJL016W","termid":"PBO:0083598"}


id: PBO:0068478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 57, pseudogene","termid":"PBO:0068478"}


id: PBO:0071615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 33","termid":"PBO:0071615"}


id: GO:0043724
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-keto-3-deoxygalactonate = D-glyceraldehyde + pyruvate.","definition_xrefs":["PMID:12824170"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-keto-3-deoxygalactonate aldolase activity","synonyms":[{"name":"KDGal aldolase activity","type":"exact"}],"termid":"GO:0043724"}


id: PBO:0074783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 4B","termid":"PBO:0074783"}


id: GO:0005674
data:
  {"annotated_genes":["SJAG_00095","SJAG_04852","SJAG_00735"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71637,80946,82197],"is_not":false,"summary":null,"term":"GO:0005674"}]},"cv_name":"cellular_component","definition":"A general transcription initiation factor which in humans consists of a heterodimer of an alpha and a beta subunit. Helps recruit RNA polymerase II to the initiation complex and promotes translation elongation.","definition_xrefs":["PMID:7597077","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"},{"relation_name":"part_of","term_name":"RNA polymerase II, holoenzyme","termid":"GO:0016591"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00095":null,"SJAG_00735":null,"SJAG_04852":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005654","GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"transcription factor TFIIF complex","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0005674","terms_by_termid":{"GO:0005674":null}}


id: PBO:0053449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 397","termid":"PBO:0053449"}


id: GO:0061092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the translocation, or flipping, of phospholipid molecules from one monolayer of a membrane bilayer to the opposite monolayer.","definition_xrefs":["GOC:tb","GOC:jh","PMID:19966303","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of phospholipid translocation","termid":"GO:0061091"},{"relation_name":"is_a","term_name":"positive regulation of phospholipid transport","termid":"GO:2001140"},{"relation_name":"positively_regulates","term_name":"phospholipid translocation","termid":"GO:0045332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0061024"],"is_obsolete":false,"name":"positive regulation of phospholipid translocation","termid":"GO:0061092"}


id: PBO:0070973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18 pseudogene 11","termid":"PBO:0070973"}


id: PBO:0024807
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-contributes_to","termid":"PBO:0024807"}


id: GO:1905469
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of clathrin-coated pit assembly.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:bf","GOC:PARL","PMID:26589353"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of clathrin-coated pit assembly (obsolete GO:1905469)","synonyms":[{"name":"down regulation of clathrin-coated pit assembly","type":"exact"},{"name":"down regulation of clathrin-coated pit formation","type":"exact"},{"name":"down regulation of coated pit assembly","type":"exact"},{"name":"down regulation of coated pit formation","type":"exact"},{"name":"down-regulation of clathrin-coated pit assembly","type":"exact"},{"name":"down-regulation of clathrin-coated pit formation","type":"exact"},{"name":"down-regulation of coated pit assembly","type":"exact"},{"name":"down-regulation of coated pit formation","type":"exact"},{"name":"downregulation of clathrin-coated pit assembly","type":"exact"},{"name":"downregulation of clathrin-coated pit formation","type":"exact"},{"name":"downregulation of coated pit assembly","type":"exact"},{"name":"downregulation of coated pit formation","type":"exact"},{"name":"inhibition of clathrin-coated pit assembly","type":"narrow"},{"name":"inhibition of clathrin-coated pit formation","type":"narrow"},{"name":"inhibition of coated pit assembly","type":"narrow"},{"name":"inhibition of coated pit formation","type":"narrow"},{"name":"negative regulation of clathrin-coated pit formation","type":"exact"},{"name":"negative regulation of coated pit assembly","type":"exact"},{"name":"negative regulation of coated pit formation","type":"exact"}],"termid":"GO:1905469"}


id: PBO:0077610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMSB4X pseudogene 1","termid":"PBO:0077610"}


id: PBO:0091581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMN complex subunit Yip11/Gem2","termid":"PBO:0091581"}


id: PR:O94706
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription initiation factor TFIID subunit 8 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR23307:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription initiation factor TFIID subunit 8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1259.06","secondary_identifiers":["UniProtKB:O94706"],"synonyms":[{"name":"SPCC1259.06","type":"related"},{"name":"Spom972h-TAF8","type":"exact"},{"name":"TBP-associated factor 8 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94706"}


id: GO:0016345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of chromosomes in the center of the spindle towards the spindle poles, mediated by the shortening of microtubules attached to the chromosomes, during female meiosis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic chromosome movement towards spindle pole","termid":"GO:0016344"},{"relation_name":"part_of","term_name":"female meiosis chromosome segregation","termid":"GO:0016321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0007049","GO:0051179","GO:0140013","GO:0008150"],"is_obsolete":false,"name":"female meiotic chromosome movement towards spindle pole","synonyms":[{"name":"chromosome movement towards spindle pole during female meiosis","type":"exact"},{"name":"female meiotic chromosome movement","type":"broad"},{"name":"female meiotic chromosome movement to spindle pole","type":"exact"}],"termid":"GO:0016345"}


id: PATO:0002401
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"characterised by an unidentifiable pattern.","definition_xrefs":["PATOC:MPATH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spatial pattern","termid":"PATO:0000060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"random pattern","termid":"PATO:0002401"}


id: PBO:0112311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TGF-beta induced lncRNA activating myofibroblasts","termid":"PBO:0112311"}


id: MONDO:0100545
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id: MONDO:0012566
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autism, susceptiblity to","termid":"MONDO:0020836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autism, susceptibility to, 11","secondary_identifiers":["MEDGEN:370932","OMIM:610836","UMLS:C1970512"],"synonyms":[{"name":"AUTS11","type":"exact"},{"name":"autism susceptibility 11","type":"exact"},{"name":"autism, susceptibility to, 11","type":"exact"}],"termid":"MONDO:0012566","xrefs":{"Monarch":{"xref_id":"0012566"}}}


id: PBO:0048020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferric chelate reductase 1 like","termid":"PBO:0048020"}


id: PBO:0048733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate dehydrogenase 1 pseudogene 4","termid":"PBO:0048733"}


id: PBO:0117431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zDHHC palmitoyltransferase 22","termid":"PBO:0117431"}


id: GO:0017063
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: phosphatidylcholine + H2O = 2-acylglycerophosphocholine + a fatty acid anion.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphatidylserine-specific phospholipase A1 activity (obsolete GO:0017063)","synonyms":[{"name":"phosphatidylserine-specific phospholipase A1 activity","type":"exact"}],"termid":"GO:0017063"}


id: MONDO:0022953
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete delta-1-pyrroline-5-carboxylate dehydrogenase deficiency (obsolete MONDO:0022953)","termid":"MONDO:0022953","xrefs":{"Monarch":{"xref_id":"0022953"}}}


id: MONDO:1010675
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Anotia that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anotia, non-human animal","termid":"MONDO:1010090"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anotia, cattle","secondary_identifiers":["OMIA:001411-9913"],"termid":"MONDO:1010675","xrefs":{"Monarch":{"xref_id":"1010675"}}}


id: GO:2001261
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of semaphorin-plexin signaling pathway.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of semaphorin-plexin signaling pathway","termid":"GO:2001260"},{"relation_name":"negatively_regulates","term_name":"semaphorin-plexin signaling pathway","termid":"GO:0071526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of semaphorin-plexin signaling pathway","synonyms":[{"name":"negative regulation of semaphorin-plexin signalling pathway","type":"exact"}],"termid":"GO:2001261"}


id: PR:Q1MTR2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An RNA-binding protein with serine-rich domain 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR15481:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein with serine-rich domain 1 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13G1.14c","secondary_identifiers":["UniProtKB:Q1MTR2"],"synonyms":[{"name":"Spom972h-RNPS1","type":"exact"}],"termid":"PR:Q1MTR2"}


id: PBO:0040055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein 2/3 complex subunit 3 pseudogene 3","termid":"PBO:0040055"}


id: MONDO:0009492
data:
  {"annotated_genes":["SJAG_02769"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88338],"is_not":false,"summary":null,"term":"MONDO:0009492"}]},"cv_name":"mondo","definition":"Succinyl-CoA:3-ketoacid CoA transferase deficiency (SCOTD) is a defect in ketone body utilization characterized by severe, potentially fatal intermittent episodes of ketoacidosis.","definition_xrefs":["Orphanet:832"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of ketolysis","termid":"MONDO:0019229"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02769":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"succinyl-CoA:3-ketoacid CoA transferase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:270.8","MESH:C537527","MEDGEN:137979","GARD:4774","NANDO:2200499","UMLS:C0342792","OMIM:245050","SCTID:238004006"],"synonyms":[{"name":"3-oxoacid CoA transferase deficiency","type":"related"},{"name":"OXCT1 deficiency","type":"exact"},{"name":"SCOT deficiency","type":"exact"},{"name":"SCOTD","type":"related"},{"name":"Scot deficiency","type":"related"},{"name":"Succinyl CoA:3-oxoacid CoA transferase deficiency","type":"exact"},{"name":"ketoacidosis due to Scot deficiency","type":"related"},{"name":"succinyl-CoA acetoacetate transferase deficiency","type":"exact"},{"name":"succinyl-CoA:3-ketoacid CoA transferase deficiency","type":"exact"},{"name":"succinyl-CoA:3-oxoacid CoA transferase deficiency","type":"exact"},{"name":"succinyl-CoA:3-oxoacid-CoA transferase deficiency","type":"related"},{"name":"succinyl-Coa:3-ketoacid Coa-transferase deficiency","type":"related"},{"name":"succinyl-Coa:acetoacetate transferase deficiency","type":"related"}],"termid":"MONDO:0009492","terms_by_termid":{"MONDO:0009492":null},"xrefs":{"Monarch":{"xref_id":"0009492"}}}


id: PBO:0083616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dynein light intermediate chain (LIC); localizes with dynein, null mutant is defective in nuclear migration","termid":"PBO:0083616"}


id: PBO:0074946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 110","termid":"PBO:0074946"}


id: GO:1903104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of insulin receptor signaling pathway involved in determination of adult lifespan.","definition_xrefs":["GO_REF:0000058","GOC:kmv","GOC:TermGenie","PMID:19853560"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of insulin receptor signaling pathway involved in determination of adult lifespan (obsolete GO:1903104)","synonyms":[{"name":"regulation of daf-2 receptor signaling pathway of determination of adult lifespan","type":"narrow"},{"name":"regulation of insulin receptor signaling pathway of determination of adult lifespan","type":"exact"},{"name":"regulation of insulin receptor signalling pathway of determination of adult lifespan","type":"exact"}],"termid":"GO:1903104"}


id: GO:0018549
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: methanethiol + O2 + H2O = formaldehyde + hydrogen sulfide + hydrogen peroxide.","definition_xrefs":["EC:1.8.3.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor","termid":"GO:0016670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"methanethiol oxidase activity","secondary_identifiers":["UM-BBD_reactionID:r0209","MetaCyc:METHANETHIOL-OXIDASE-RXN","RHEA:11812"],"synonyms":[{"name":"(MM)-oxidase activity","type":"related"},{"name":"MT-oxidase activity","type":"related"},{"name":"methanethiol:oxygen oxidoreductase activity","type":"related"},{"name":"methyl mercaptan oxidase activity","type":"related"},{"name":"methylmercaptan oxidase activity","type":"related"}],"termid":"GO:0018549"}


id: PBO:0000005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene characterisation status","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fission yeast specific family","termid":"PBO:0000005"}


id: PBO:0076173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfotransferase family 1C member 4","termid":"PBO:0076173"}


id: PBO:0074022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 15","termid":"PBO:0074022"}


id: GO:0075099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism modulates the frequency, rate or extent of protein kinase-mediated signal transduction in the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by host of symbiont protein kinase-mediated signal transduction (obsolete GO:0075099)","termid":"GO:0075099"}


id: PBO:0018004
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ssb1 stimulates helicase activity at low ATP concentration (0.2 mM)","termid":"PBO:0018004"}


id: MONDO:0003169
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A astrocytoma that involves the diencephalon.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diencephalic cancer","termid":"MONDO:0002786"},{"relation_name":"is_a","term_name":"brain glioma","termid":"MONDO:0005499"},{"relation_name":"is_a","term_name":"brain astrocytoma","termid":"MONDO:0021631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"diencephalic astrocytomas","secondary_identifiers":["MEDGEN:272542","NCIT:C5128","UMLS:C1333284","DOID:4855"],"synonyms":[{"name":"astrocytoma (excluding glioblastoma) of diencephalon","type":"exact"},{"name":"astrocytoma of diencephalon","type":"exact"},{"name":"astrocytoma of the diencephalon","type":"exact"},{"name":"diencephalic astrocytoma","type":"exact"},{"name":"diencephalon astrocytoma","type":"exact"},{"name":"diencephalon astrocytoma (excluding glioblastoma)","type":"exact"}],"termid":"MONDO:0003169","xrefs":{"Monarch":{"xref_id":"0003169"}}}


id: PBO:0059062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MOB kinase activator 3A","termid":"PBO:0059062"}


id: PBO:0054894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2308","termid":"PBO:0054894"}


id: SO:0000945
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region that results from recombination between attP_site and attB_site, composed of the 5' portion of attP_site and the 3' portion of attB_site.","definition_xrefs":["SO:as"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integration_excision_site","termid":"SO:0000946"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"attR_site","synonyms":[{"name":"attPB'","type":"related"},{"name":"attR site","type":"exact"}],"termid":"SO:0000945"}


id: MONDO:0008992
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Juberg-Hayward syndrome is a polymalformative syndrome that associates multiple skeletal anomalies with microcephaly, facial dysmorphism, urogenital anomalies and intellectual deficit.","definition_xrefs":["Orphanet:2319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Juberg-Hayward syndrome","secondary_identifiers":["icd11.foundation:395922030","SCTID:721874001","MEDGEN:162906","GARD:3060","MESH:C537690","OMIM:216100","NORD:1531","UMLS:C0796099"],"synonyms":[{"name":"JHS","type":"related"},{"name":"Juberg-Hayward syndrome","type":"exact"},{"name":"Orocraniodigital Syndrome","type":"exact"},{"name":"Orocraniodigital syndrome","type":"exact"},{"name":"cleft LIP/palate with abnormal thumbs and microcephaly","type":"related"},{"name":"cleft lip/palate-abnormal thumbs-microcephaly syndrome","type":"exact"}],"termid":"MONDO:0008992","xrefs":{"Monarch":{"xref_id":"0008992"}}}


id: GO:0061175
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Terminal inflated portion of the axon of a non-glutamatergic neuron, containing the specialized apparatus necessary to release neurotransmitters at a regulatory synapse. The axon terminus is considered to be the whole region of thickening and the terminal bouton is a specialized region of it.","definition_xrefs":["GOC:dph","GOC:mc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terminal bouton","termid":"GO:0043195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"type II terminal bouton","synonyms":[{"name":"type II terminal button","type":"exact"}],"termid":"GO:0061175"}


id: PBO:0090473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP I, II, and III complex subunit Trs23","termid":"PBO:0090473"}


id: MONDO:0008824
data:
  {"annotated_genes":["SJAG_01065"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87916],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100104"}]},"cv_name":"mondo","definition":"Fetal akinesia deformation sequence (FADS) is a condition characterized by decreased fetal movement (fetal akinesia) as well as intra-uterine growth restriction (IUGR), multiple joint contractures (arthrogryposis), facial anomalies, underdevelopment of the lungs (pulmonary hypoplasia) and other developmental abnormalities. It is generally accepted that this condition is not a true diagnosis or a specific syndrome, but rather a description of a group of abnormalities resulting from fetal akinesia. About 30% of affected individuals are stillborn; many liveborn infants survive only a short time due to complications of pulmonary hypoplasia. FADS may be inherited in an autosomal recessive manner in some cases and may sometimes be caused by mutations in the RAPSN or DOK7 genes.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete non-syndromic respiratory or mediastinal malformation (obsolete MONDO:0015221)","termid":"MONDO:0015221"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"arthrogryposis multiplex congenita","termid":"MONDO:0015168"},{"relation_name":"is_a","term_name":"thoracic malformation","termid":"MONDO:0015929"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01065":null},"genotype_count":0,"is_obsolete":false,"name":"fetal akinesia deformation sequence","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:9634","MESH:C536647","OMIMPS:208150","NCIT:C129071","SCTID:401138005","DOID:0111375","ICD9:754.89"],"synonyms":[{"name":"FADS","type":"exact"},{"name":"arthrogryposis multiplex congenita with pulmonary hypoplasia","type":"related"},{"name":"arthrogryposis multiplex congenita-pulmonary hypoplasia syndrome","type":"exact"},{"name":"fetal akinesia deformation sequence","type":"exact"},{"name":"fetal akinesia sequence","type":"related"},{"name":"foetal akinesia sequence","type":"related"}],"termid":"MONDO:0008824","terms_by_termid":{"MONDO:0100104":null},"xrefs":{"Monarch":{"xref_id":"0008824"}}}


id: GO:0014830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the arteriole. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The arteriole is the smallest division of the artery located between the muscular arteries and the capillaries.","definition_xrefs":["GOC:mtg_muscle","MA:0000706","MSH:D001160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"artery smooth muscle contraction","termid":"GO:0014824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"arteriole smooth muscle contraction","termid":"GO:0014830"}


id: PBO:0027315
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_cytoplasmic_stress_granule","termid":"PBO:0027315"}


id: MONDO:0012282
data:
  {"annotated_genes":["SJAG_00183"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86830],"is_not":false,"summary":null,"term":"MONDO:0012282"}]},"cv_name":"mondo","definition":"An autosomal recessive syndrome characterized by joint contractures, skeletal abnormalities, anterior segment anomalies of the eye and early lethality.","definition_xrefs":["PMID:10319196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"},{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"},{"relation_name":"is_a","term_name":"B3GALT6-congenital disorder of glycosylation","termid":"MONDO:0100586"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"Al-Gazali syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:609465","UMLS:C1836121","MESH:C536817","MEDGEN:373020","Orphanet:2725","GARD:10054"],"synonyms":[{"name":"Al Gazali Al Talabani syndrome","type":"related"},{"name":"Al Gazali syndrome","type":"related"},{"name":"Al-Gazali syndrome","type":"exact"},{"name":"eye defects arachnodactyly cardiopathy","type":"related"}],"termid":"MONDO:0012282","terms_by_termid":{"MONDO:0012282":null},"xrefs":{"Monarch":{"xref_id":"0012282"}}}


id: PBO:0088623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome base subcomplex ATPase subunit Rpt2","termid":"PBO:0088623"}


id: PBO:0060445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD kinase 2, mitochondrial","termid":"PBO:0060445"}


id: MONDO:0016399
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete amino acid or protein metabolism disease with epilepsy (obsolete MONDO:0016399)","secondary_identifiers":["Orphanet:225689"],"termid":"MONDO:0016399","xrefs":{"Monarch":{"xref_id":"0016399"}}}


id: PBO:0016054
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell Division Cycle","termid":"PBO:0016054"}


id: GO:0140082
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Isoenergetic transfer of SUMO from one protein to an existing ubiquitin chain via the reaction X-ubiquitin + Y-ubiquitin = Y-ubiquitin-ubiquitin + X, where both the X-ubiquitin and Y-ubiquitin-ubiquitin linkages are thioester bonds between the C-terminal glycine of ubiquitin and a sulfhydryl side group of a cysteine residue.","definition_xrefs":["PMID:28552615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SUMO ligase activity","termid":"GO:0061665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0019787"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0019787","GO:0140096","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"SUMO-ubiquitin ligase activity","termid":"GO:0140082"}


id: PBO:0026745
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_phosphorylation_during_glucose_starvation","termid":"PBO:0026745"}


id: SO:0002269
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"R2 retrotransposons are LINE elements (SO:0000194) that insert site-specifically into the host organism's 28S ribosomal RNA (rRNA) genes.","definition_xrefs":["PMID:21734471"],"direct_ancestors":[{"relation_name":"is_a","term_name":"LINE_element","termid":"SO:0000194"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R2_LINE_retrotransposon","synonyms":[{"name":"R2 LINE retrotransposon","type":"exact"},{"name":"R2 retrotransposon","type":"exact"},{"name":"RIR retrotransposon","type":"exact"}],"termid":"SO:0002269"}


id: SO:0005837
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The primary transcript of an evolutionarily conserved eukaryotic low molecular weight RNA capable of intermolecular hybridization with both homologous and heterologous 18S rRNA.","definition_xrefs":["PMID:2251119"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snoRNA_primary_transcript","termid":"SO:0000232"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U14_snoRNA_primary_transcript","synonyms":[{"name":"4.5S snRNA primary transcript","type":"exact"},{"name":"U14 snoRNA primary transcript","type":"exact"}],"termid":"SO:0005837"}


id: GO:0052365
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of xylan within the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by host of symbiont xylan (obsolete GO:0052365)","termid":"GO:0052365"}


id: PBO:0064227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase C gamma 1","termid":"PBO:0064227"}


id: PBO:0111772
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAR domain","termid":"PBO:0111772"}


id: PBO:0058041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4262","termid":"PBO:0058041"}


id: PBO:0041770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calpain 10","termid":"PBO:0041770"}


id: PBO:0080775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XK related 6","termid":"PBO:0080775"}


id: GO:0052651
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of monoacylglycerol, any ester of glycerol in which any one of its hydroxyl groups has been acylated with a fatty acid, the other being non-esterified.","definition_xrefs":["PMID:25290914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoacylglycerol metabolic process","termid":"GO:0046462"},{"relation_name":"is_a","term_name":"acylglycerol catabolic process","termid":"GO:0046464"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"monoacylglycerol catabolic process","synonyms":[{"name":"monoacylglycerol breakdown","type":"exact"},{"name":"monoacylglycerol catabolism","type":"exact"},{"name":"monoacylglycerol degradation","type":"exact"}],"termid":"GO:0052651"}


id: PBO:0027284
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_nucleus_during_cellular_response_to_salt_stress","termid":"PBO:0027284"}


id: PATO:0002229
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quadrangular shape quality inhering in a bearer by virtue of the bearer's being approximately rectangular.","direct_ancestors":[{"relation_name":"is_a","term_name":"quadrangular","termid":"PATO:0001988"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subrectangular","termid":"PATO:0002229"}


id: PBO:0086823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YNL018C has a paralog, YNL034W, that arose from a segmental duplication","termid":"PBO:0086823"}


id: PBO:0064782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPM1B divergent transcript","termid":"PBO:0064782"}


id: GO:0090076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which the extent of skeletal muscle tissue contraction is reduced. Muscle relaxation involves the removal of calcium from the cytoplasm to the sarcoplasmic reticulum lumen through the action of Ca2+ ATPases.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"relaxation of muscle","termid":"GO:0090075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"relaxation of skeletal muscle","termid":"GO:0090076"}


id: PBO:0045370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthamide biosynthesis 5","termid":"PBO:0045370"}


id: PBO:0087404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Structural component of the meiotic outer plaque; outer plaque is a membrane-organizing center that assembles on the cytoplasmic face of the spindle pole body during meiosis II and triggers the formation of the prospore membrane","termid":"PBO:0087404"}


id: CHEBI:16526
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbon dioxide","termid":"CHEBI:16526"}


id: MONDO:0020310
data:
  {"annotated_genes":["SJAG_02765","SJAG_00824","SJAG_01184"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87153],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024556"},{"annotations":[88951],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014924"},{"annotations":[88950],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014925"}]},"cv_name":"mondo","definition":"Familial focal epilepsy with variable foci is a rare genetic epilepsy disorder characterized by autosomal dominant lesional and nonlesional focal epilepsy with variable penetrance. Focal seizures emanate from different cortical locations (temporal, frontal, centroparietal, parietal, parietaloccipital, occipital) in different family members, but for each individual a single focus remains constant throughout lifetime. Seizure type (tonic, tonic-clonic or hyperkinetic) and severity varies among family members and tends to decrease (but do not disappear) during adulthood. Many patients have an aura and show automatisms during diurnal seizures whereas others have nocturnal seizures. Most individuals are of normal intelligence but patients with intellectual disability, autistic spectrum disorder and obsessive-compulsive disorder have been described.","definition_xrefs":["Orphanet:98820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial partial epilepsy","termid":"MONDO:0017704"},{"relation_name":"is_a","term_name":"variable-age onset focal epilepsy syndrome","termid":"MONDO:0800492"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00824":null,"SJAG_01184":null,"SJAG_02765":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"familial focal epilepsy with variable foci","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:855404450","OMIMPS:604364","GARD:13295","MESH:C565785","DOID:0081420","MEDGEN:348951","UMLS:C1858477","SCTID:764522009"],"synonyms":[{"name":"FFEVF","type":"exact"},{"name":"epilepsy, familial focal, with variable foci","type":"exact"},{"name":"familial focal epilepsy with variable foci","type":"exact"},{"name":"familial partial epilepsy with variable foci","type":"exact"}],"termid":"MONDO:0020310","terms_by_termid":{"MONDO:0014924":null,"MONDO:0014925":null,"MONDO:0024556":null},"xrefs":{"Monarch":{"xref_id":"0020310"}}}


id: PBO:0057368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548aj-2","termid":"PBO:0057368"}


id: FYPO:0007209
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cohesion between sister chromatids is decreased along the length of the chromosome arms during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah","PMID:31483748"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid cohesion","termid":"FYPO:0006521"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000631","FYPO:0000641","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased sister chromatid cohesion along chromosome arms during mitotic interphase","synonyms":[{"name":"decreased mitotic sister chromatid cohesion along chromosome arms during interphase","type":"exact"},{"name":"decreased sister chromatid cohesion along chromosome arms during interphase of mitotic cell cycle","type":"exact"},{"name":"decreased sister chromatid cohesion along chromosome arms during mitotic interphase during vegetative growth","type":"exact"},{"name":"reduced sister chromatid cohesion along chromosome arms during mitotic interphase","type":"exact"}],"termid":"FYPO:0007209"}


id: PBO:0062330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily C member 69 pseudogene","termid":"PBO:0062330"}


id: PR:Q10180
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug113 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 113 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3F10.05c","synonyms":[{"name":"Spom972h-mug113","type":"exact"}],"termid":"PR:Q10180"}


id: PBO:0003084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"single-stranded telomeric binding protein Tgc1","termid":"PBO:0003084"}


id: PBO:0005494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Jmjc domain chromatin associated protein Epe1","termid":"PBO:0005494"}


id: PBO:0039294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG9 intronic transcript 1","termid":"PBO:0039294"}


id: MONDO:0005672
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Blastomycosis is a rare infection that may develop when people inhale a fungus called Blastomyces dermatitidis, a fungus that is found in moist soil, particularly where there is rotting vegetation. The fungus enters the body through the lungs, infecting them. The fungus then spreads to other areas of the body.The infection may affect the skin, bones and joints, and other areas. The disease usually affects people with weakened immune systems, such as those with HIV or who have had an organ transplant.","direct_ancestors":[{"relation_name":"is_a","term_name":"primary systemic mycosis","termid":"MONDO:0000308"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"blastomycosis","secondary_identifiers":["ICD9:116","DOID:12663","MEDGEN:597","SCTID:191950004","UMLS:C0005716","MESH:D001759","NCIT:C34429","CSP:1988-4119","NCIT:C34428","ICD10CM:B40","ICD9:116.0","EFO:0007174","icd11.foundation:1968108845"],"synonyms":[{"name":"Blastomyces dermatitidis caused disease or disorder","type":"exact"},{"name":"Blastomyces dermatitidis disease or disorder","type":"exact"},{"name":"Blastomyces dermatitidis infection","type":"exact"},{"name":"Blastomyces dermatitidis infectious disease","type":"exact"},{"name":"Chicago disease","type":"exact"},{"name":"Gilchrist's disease","type":"exact"},{"name":"North American blastomycosis","type":"exact"},{"name":"blastomycotic infection","type":"exact"},{"name":"infection by Blastomyces dermatitidis","type":"exact"}],"termid":"MONDO:0005672","xrefs":{"Monarch":{"xref_id":"0005672"}}}


id: PBO:0034078
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_apomorphy_relationship_with","termid":"PBO:0034078"}


id: MONDO:0009687
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"congenital myasthenic syndrome","termid":"MONDO:0018940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"myasthenia, congenital, refractory to acetylcholinesterase inhibitors","secondary_identifiers":["MEDGEN:338127","MESH:C564979","OMIM:254190","UMLS:C1850806"],"synonyms":[{"name":"myasthenia, congenital, refractory to acetylcholinesterase inhibitors","type":"exact"}],"termid":"MONDO:0009687","xrefs":{"Monarch":{"xref_id":"0009687"}}}


id: MONDO:0100099
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by the inability to belch, abdominal bloating and discomfort/nausea, or chest pain, especially after eating, socially awkward gurgling noises from the chest and lower neck as though the esophagus is churning and straining to eject the air, excessive flatulence, social inhibition, and difficulty vomiting (common but not universal). Botulinum toxin (BT) injection into the cricopharyngeus muscle (CPM) is done for both diagnosis and treatment of R-CPD.","definition_xrefs":["PMID:31236539"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retrograde cricopharyngeus dysfunction","synonyms":[{"name":"R-CPD","type":"exact"}],"termid":"MONDO:0100099","xrefs":{"Monarch":{"xref_id":"0100099"}}}


id: GO:0018458
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (1S,6R)-isopiperitenol + NAD+ = (6R)-isoperitenone + H+ + NADH.","definition_xrefs":["RHEA:20860","EC:1.1.1.223"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"isopiperitenol dehydrogenase activity","secondary_identifiers":["UM-BBD_reactionID:r0740","KEGG_REACTION:R03261","MetaCyc:ISOPIPERITENOL-DEHYDROGENASE-RXN"],"synonyms":[{"name":"(-)-trans-isopiperitenol:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0018458"}


id: GO:0050012
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 juglone + O2 = 2 3,5-dihydroxy-1,4-naphthoquinone + 2 H+.","definition_xrefs":["RHEA:18745","PMID:4041238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups, oxygen as acceptor","termid":"GO:0016727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"juglone 3-hydroxylase activity","secondary_identifiers":["KEGG_REACTION:R04327","MetaCyc:JUGLONE-3-MONOOXYGENASE-RXN","EC:1.17.3.4"],"synonyms":[{"name":"5-hydroxy-1,4-naphthoquinone,hydrogen-donor:oxygen oxidoreductase (3-hydroxylating)","type":"related"},{"name":"juglone 3-monooxygenase activity","type":"exact"},{"name":"juglone hydroxylase activity","type":"exact"},{"name":"naphthoquinone hydroxylase activity","type":"related"}],"termid":"GO:0050012"}


id: MONDO:0015940
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any of the forms of rheumatologic disorder that have a rare incidence.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare rheumatologic disease (obsolete MONDO:0015940)","secondary_identifiers":["Orphanet:182231"],"synonyms":[{"name":"rare rheumatologic disorder","type":"exact"},{"name":"rare rheumatological disease","type":"exact"}],"termid":"MONDO:0015940","xrefs":{"Monarch":{"xref_id":"0015940"}}}


id: GO:1904405
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a formaldehyde stimulus.","definition_xrefs":["GOC:TermGenie","PMID:9149109","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to aldehyde","termid":"GO:0110096"},{"relation_name":"is_a","term_name":"response to formaldehyde","termid":"GO:1904404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to formaldehyde","termid":"GO:1904405"}


id: GO:1903817
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of voltage-gated potassium channel activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","PMID:19219384"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of potassium ion transmembrane transporter activity","termid":"GO:1901017"},{"relation_name":"is_a","term_name":"negative regulation of cation channel activity","termid":"GO:2001258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of voltage-gated potassium channel activity","synonyms":[{"name":"down regulation of voltage gated potassium channel activity","type":"exact"},{"name":"down regulation of voltage-dependent potassium channel activity","type":"exact"},{"name":"down regulation of voltage-gated potassium channel activity","type":"exact"},{"name":"down regulation of voltage-gated potassium ion channel activity","type":"exact"},{"name":"down regulation of voltage-sensitive potassium channel","type":"exact"},{"name":"down-regulation of voltage gated potassium channel activity","type":"exact"},{"name":"down-regulation of voltage-dependent potassium channel activity","type":"exact"},{"name":"down-regulation of voltage-gated potassium channel activity","type":"exact"},{"name":"down-regulation of voltage-gated potassium ion channel activity","type":"exact"},{"name":"down-regulation of voltage-sensitive potassium channel","type":"exact"},{"name":"downregulation of voltage gated potassium channel activity","type":"exact"},{"name":"downregulation of voltage-dependent potassium channel activity","type":"exact"},{"name":"downregulation of voltage-gated potassium channel activity","type":"exact"},{"name":"downregulation of voltage-gated potassium ion channel activity","type":"exact"},{"name":"downregulation of voltage-sensitive potassium channel","type":"exact"},{"name":"inhibition of voltage gated potassium channel activity","type":"narrow"},{"name":"inhibition of voltage-dependent potassium channel activity","type":"narrow"},{"name":"inhibition of voltage-gated potassium channel activity","type":"narrow"},{"name":"inhibition of voltage-gated potassium ion channel activity","type":"narrow"},{"name":"inhibition of voltage-sensitive potassium channel","type":"narrow"},{"name":"negative regulation of voltage gated potassium channel activity","type":"exact"},{"name":"negative regulation of voltage-dependent potassium channel activity","type":"exact"},{"name":"negative regulation of voltage-gated potassium ion channel activity","type":"exact"},{"name":"negative regulation of voltage-sensitive potassium channel","type":"exact"}],"termid":"GO:1903817"}


id: GO:1990396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The error-free repair of a single-strand break in DNA in which the broken DNA molecule is repaired using homologous sequences. A strand in the broken DNA searches for a homologous region in an intact chromosome to serve as the template for DNA synthesis. The restoration of two intact DNA molecules results in the exchange, reciprocal or nonreciprocal, of genetic material between the intact DNA molecule and the broken DNA molecule.","definition_xrefs":["GOC:bhm","PMID:24339919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single strand break repair","termid":"GO:0000012"},{"relation_name":"is_a","term_name":"recombinational repair","termid":"GO:0000725"},{"relation_name":"is_a","term_name":"error-free postreplication DNA repair","termid":"GO:0042275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006310","GO:0006281"],"is_obsolete":false,"name":"single-strand break repair via homologous recombination","termid":"GO:1990396"}


id: PBO:0068934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 177, pseudogene","termid":"PBO:0068934"}


id: GO:0035777
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the pronephric distal tubule over time, from its formation to the mature structure. A pronephric nephron tubule is an epithelial tube that is part of the pronephros.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:yaf","PMID:18787069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pronephric nephron tubule development","termid":"GO:0039020"},{"relation_name":"is_a","term_name":"distal tubule development","termid":"GO:0072017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pronephric distal tubule development","termid":"GO:0035777"}


id: PBO:0082216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha 5 subunit of the 20S proteasome; involved in ubiquitin-dependent catabolism; human homolog is subunit zeta","termid":"PBO:0082216"}


id: GO:0097144
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An oligomeric protein complex consisting of BAX, a member of the Bcl-2 family of anti- and proapoptotic regulators.","definition_xrefs":["GOC:so","PMID:14634621"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bcl-2 family protein complex","termid":"GO:0097136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"BAX complex","termid":"GO:0097144"}


id: GO:0099014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a neuronal dense core vesicle.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dense core granule organization","termid":"GO:0061109"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuronal dense core vesicle organization","termid":"GO:0099014"}


id: PBO:0081269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 33C, pseudogene","termid":"PBO:0081269"}


id: PBO:0053307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lin-28 homolog B","termid":"PBO:0053307"}


id: PBO:0031826
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_RNA_modification","termid":"PBO:0031826"}


id: GO:0031715
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a C5L2 anaphylatoxin chemotactic receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C5a anaphylatoxin chemotactic receptor binding","termid":"GO:0031714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"C5L2 anaphylatoxin chemotactic receptor binding","synonyms":[{"name":"C5L2 anaphylatoxin chemotactic receptor ligand","type":"narrow"}],"termid":"GO:0031715"}


id: FYPO:0007204
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which DNA binding at an rDNA spacer replication fork barrier by a gene product does not occur, when a gene or the bound DNA sequence is mutated. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PMID:18794373","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished double-stranded DNA binding","termid":"FYPO:0007543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000653","FYPO:0000652"],"is_obsolete":false,"name":"abolished rDNA spacer replication fork barrier binding","synonyms":[{"name":"abolished DNA binding at rDNA spacer replication fork barrier","type":"exact"}],"termid":"FYPO:0007204"}


id: GO:0005358
data:
  {"annotated_genes":["SJAG_03608"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[119078],"is_not":false,"summary":null,"term":"GO:0005358"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glucose + H+ = glucose + H+. This activity is constitutive and therefore always present, regardless of demand. Symporter activity enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-glucose:proton symporter activity","termid":"GO:0005356"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03608":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"high-affinity D-glucose:proton symporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"high-affinity glucose:proton symporter activity","type":"exact"},{"name":"high-affinity hydrogen/glucose transporter activity","type":"broad"},{"name":"high-affinity hydrogen:glucose symporter activity","type":"exact"},{"name":"high-affinity hydrogen:glucose transporter activity","type":"broad"}],"termid":"GO:0005358","terms_by_termid":{"GO:0005358":null}}


id: MONDO:0020260
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete myasthenic syndrome with eye involvement (obsolete MONDO:0020260)","secondary_identifiers":["Orphanet:98690"],"termid":"MONDO:0020260","xrefs":{"Monarch":{"xref_id":"0020260"}}}


id: PBO:0052114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily C member 2","termid":"PBO:0052114"}


id: MONDO:0013109
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"acute lymphoblastic leukemia","termid":"MONDO:0004967"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukemia, acute lymphocytic, susceptibility to, 2","secondary_identifiers":["UMLS:C2751593","MEDGEN:442766","OMIM:613067"],"synonyms":[{"name":"ALL2","type":"related"},{"name":"leukemia, acute lymphoblastic, susceptibility to, 2","type":"related"},{"name":"leukemia, acute lymphocytic, susceptibility to, 2","type":"exact"}],"termid":"MONDO:0013109","xrefs":{"Monarch":{"xref_id":"0013109"}}}


id: FYPO:0002991
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the G1/S transition of the mitotic cell cycle begins earlier than normal, during a cellular response to hydrogen peroxide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"premature mitotic G1/S phase transition","termid":"FYPO:0000398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"premature mitotic G1/S phase transition during cellular response to hydrogen peroxide","synonyms":[{"name":"advanced mitotic G1/S phase transition during cellular response to hydrogen peroxide","type":"exact"},{"name":"premature G1/S phase transition during cellular response to hydrogen peroxide during mitotic cell cycle","type":"exact"},{"name":"premature cell cycle progression through mitotic G1/S phase transition during cellular response to hydrogen peroxide","type":"exact"},{"name":"premature mitotic G1/S phase transition during cellular response to H2O2","type":"exact"},{"name":"premature mitotic G1/S phase transition during cellular response to hydrogen peroxide during vegetative growth","type":"exact"}],"termid":"FYPO:0002991"}


id: PBO:0088209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Novel ORF identified via pan-genome analysis; conserved in other strains of S. cerevisiae","termid":"PBO:0088209"}


id: MONDO:0009305
data:
  {"annotated_genes":["SJAG_02875"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86995],"is_not":false,"summary":null,"term":"MONDO:0009305"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02875":null},"genotype_count":0,"is_obsolete":false,"name":"granulocytopenia with immunoglobulin abnormality","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111974","MESH:C565535","OMIM:233600","MEDGEN:383874","UMLS:C1856263"],"synonyms":[{"name":"granulocytopenia with immunoglobulin abnormality","type":"exact"},{"name":"immunodeficiency 59 and hypoglycemia","type":"exact"}],"termid":"MONDO:0009305","terms_by_termid":{"MONDO:0009305":null},"xrefs":{"Monarch":{"xref_id":"0009305"}}}


id: PBO:0079914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome c reductase hinge protein","termid":"PBO:0079914"}


id: GO:0044312
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transient, cytoplasmic organelle found in Plasmodium species that resembles a cytoplasmic inclusion body and whose function is poorly understood. Crystalloids form in ookinetes and disappear after ookinete-to-oocyst transformation.","definition_xrefs":["PMID:19932717","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membraneless organelle","termid":"GO:0043232"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"crystalloid","termid":"GO:0044312"}


id: GO:0120540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification, often by sulfation, of sugars in the polysaccharide chain component of chondroitin sulfate proteoglycans.","definition_xrefs":["PMID:38500384"],"gene_count":0,"genotype_count":0,"name":"obsolete chondroitin sulfate proteoglycan biosynthetic process, enzymatic modification (obsolete GO:0120540)","termid":"GO:0120540"}


id: FYPO:0001285
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylethanolamine measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased phospholipid level","termid":"FYPO:0001289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular phosphatidylethanolamine level","synonyms":[{"name":"decreased cellular PE level","type":"exact"},{"name":"decreased cellular phosphatidylethanolamine level during mitotic cell cycle","type":"related"},{"name":"decreased cellular phosphatidylethanolamine level during vegetative growth","type":"exact"},{"name":"decreased phosphatidylethanolamine accumulation","type":"related"},{"name":"reduced cellular phosphatidylethanolamine level","type":"exact"}],"termid":"FYPO:0001285"}


id: MONDO:0008872
data:
  {"annotated_genes":["SJAG_02246"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89066],"is_not":false,"summary":null,"term":"MONDO:0008872"}]},"cv_name":"mondo","definition":"A form of microcephalic primordial dwarfism (MPD) characterized by severe pre- and postnatal growth retardation, with marked microcephaly in proportion to body size, skeletal dysplasia, abnormal dentition, insulin resistance, and increased risk for cerebrovascular disease.","definition_xrefs":["Orphanet:2637"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microcephalic osteodysplastic primordial dwarfism","termid":"MONDO:0000060"},{"relation_name":"is_a","term_name":"osteochondrodysplasia","termid":"MONDO:0005516"},{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"},{"relation_name":"is_a","term_name":"primordial dwarfism and slender bone disorder","termid":"MONDO:0800063"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02246":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0700092"],"is_obsolete":false,"name":"microcephalic osteodysplastic primordial dwarfism type II","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C565898","OMIM:210720","SCTID:254103003","GARD:9844","UMLS:C0432246","MEDGEN:96587","DOID:0060609"],"synonyms":[{"name":"MOPD II","type":"related"},{"name":"MOPD type II","type":"exact"},{"name":"MOPD2","type":"related"},{"name":"Majewski osteodysplastic primordial dwarfism type II","type":"exact"},{"name":"Mopd 2","type":"related"},{"name":"microcephalic osteodysplastic primordial dwarfism type 2","type":"related"},{"name":"microcephalic osteodysplastic primordial dwarfism with tooth abnormalities","type":"related"},{"name":"microcephalic osteodysplastic primordial dwarfism, type 2","type":"related"},{"name":"microcephalic osteodysplastic primordial dwarfism, type II","type":"related"},{"name":"osteodysplastic primordial dwarfism type 2","type":"related"},{"name":"osteodysplastic primordial dwarfism type II","type":"exact"},{"name":"osteodysplastic primordial dwarfism, type 2","type":"related"}],"termid":"MONDO:0008872","terms_by_termid":{"MONDO:0008872":null},"xrefs":{"Monarch":{"xref_id":"0008872"}}}


id: PBO:0053469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 433","termid":"PBO:0053469"}


id: PBO:0089923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF2011 family conserved fungal protein","termid":"PBO:0089923"}


id: GO:0098928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Signal transduction in which the initial step occurs in a presynapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"presynaptic signal transduction","synonyms":[{"name":"presynaptic signaling pathway","type":"exact"}],"termid":"GO:0098928"}


id: FYPO:0003730
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which a cell population does not grow in a medium containing galactose as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cell population growth on galactose carbon source","termid":"FYPO:0000251"},{"relation_name":"is_a","term_name":"abolished vegetative cell population growth","termid":"FYPO:0001575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0002057","FYPO:0002060","FYPO:0002058","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"abolished cell population growth on galactose carbon source","synonyms":[{"name":"abolished galactose utilization","type":"related"},{"name":"abolished growth on galactose carbon source","type":"broad"},{"name":"abolished vegetative cell population growth on galactose carbon source","type":"exact"},{"name":"cell population growth on galactose carbon source abolished","type":"exact"}],"termid":"FYPO:0003730"}


id: MONDO:1012676
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary chondrodysplasia that occurs in sheep due to a mutation in the SLC13A1 gene.","definition_xrefs":["PMID:22742499"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrodysplasia, non-human animal","termid":"MONDO:1010306"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondrodysplasia, SLC13A1-related, sheep","secondary_identifiers":["OMIA:001400-9940"],"termid":"MONDO:1012676","xrefs":{"Monarch":{"xref_id":"1012676"}}}


id: PBO:0089313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"medial cortical node Gef2-related protein Nod1","termid":"PBO:0089313"}


id: PBO:0065680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidyl-tRNA hydrolase 2","termid":"PBO:0065680"}


id: PBO:0053800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1055","termid":"PBO:0053800"}


id: MONDO:0005483
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hair loss as a result of chemotherapy treatment.","definition_xrefs":["EFO:0005400"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alopecia","termid":"MONDO:0004907"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chemotherapy-induced alopecia","secondary_identifiers":["MEDGEN:1720394","NCIT:C164162","UMLS:C5236021"],"termid":"MONDO:0005483","xrefs":{"Monarch":{"xref_id":"0005483"}}}


id: PBO:0034312
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-composed_primarily_of","termid":"PBO:0034312"}


id: GO:0042914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a colicin into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Colicins are a group of antibiotics produced by E. coli and related species that are encoded by a group of naturally occurring plasmids, e.g. Col E1.","definition_xrefs":["GOC:jl","PMID:17347522"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacteriocin transport","termid":"GO:0043213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"colicin transport","termid":"GO:0042914"}


id: GO:0072112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a glomerular visceral epithelial cell. A glomerular visceral epithelial cell is a specialized epithelial cell that contains 'feet' that interdigitate with the 'feet' of other glomerular epithelial cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal filtration cell differentiation","termid":"GO:0061318"},{"relation_name":"is_a","term_name":"glomerular epithelial cell differentiation","termid":"GO:0072311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"podocyte differentiation","synonyms":[{"name":"glomerular visceral epithelial cell differentiation","type":"exact"}],"termid":"GO:0072112"}


