# terms

id: MONDO:0019136
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any infection due to a fungus of the Zygomycota phylum. The disease typically involves the rhino-facial-cranial area, lungs, gastrointestinal tract, skin, or less commonly other organ systems. The infecting fungi have a predilection for invading vessels of the arterial system, causing embolization and subsequent necrosis of surrounding tissue.","definition_xrefs":["NCIT:C77212"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opportunistic mycosis","termid":"MONDO:0002312"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zygomycosis","secondary_identifiers":["MedDRA:10061418","MESH:D020096","SCTID:76627001","MESH:D009091","SCTID:59277005","icd11.foundation:1676389165","GARD:10224","EFO:0007380","ICD10CM:B46","MEDGEN:12207","ICD9:117.7","DOID:8485","NORD:1946","MedDRA:10028098","UMLS:C0043541","Orphanet:73263"],"synonyms":[{"name":"Mucormycosis","type":"exact"},{"name":"Zygomycota infectious disease","type":"exact"},{"name":"mucormycosis","type":"exact"}],"termid":"MONDO:0019136","xrefs":{"Monarch":{"xref_id":"0019136"}}}


id: PBO:0075955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STAM binding protein","termid":"PBO:0075955"}


id: GO:0044506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the activity of a glucagon-like peptide receptor 1 in a second organism.","definition_xrefs":["PMID:8405712","GOC:fj","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of glucagon-like peptide receptor 1 activity in another organism (obsolete GO:0044506)","synonyms":[{"name":"modulation of glucagon-like peptide receptor 1 activity in other organism","type":"exact"},{"name":"regulation of glucagon-like peptide receptor activity in other organism","type":"exact"}],"termid":"GO:0044506"}


id: PBO:0003006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxyacid dehydrogenase (predicted)","termid":"PBO:0003006"}


id: MONDO:0035785
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete non-syndromic anorectal malformation with vestibular fistula (obsolete MONDO:0035785)","secondary_identifiers":["Orphanet:600993"],"termid":"MONDO:0035785","xrefs":{"Monarch":{"xref_id":"0035785"}}}


id: GO:0008609
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-acyl-glycerone 3-phosphate + a long-chain alcohol = 1-alkyl-glycerone 3-phosphate + a long-chain acid anion.","definition_xrefs":["EC:2.5.1.26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016765"],"is_obsolete":false,"name":"alkylglycerone-phosphate synthase activity","secondary_identifiers":["Reactome:R-HSA-390427","MetaCyc:ALKYLGLYCERONE-PHOSPHATE-SYNTHASE-RXN","RHEA:36171"],"synonyms":[{"name":"1-acyl-glycerone-3-phosphate:long-chain-alcohol O-3-phospho-2-oxopropanyltransferase activity","type":"related"},{"name":"DHAP-AT","type":"related"},{"name":"alkyl DHAP synthetase activity","type":"related"},{"name":"alkyl-DHAP","type":"related"},{"name":"alkyl-DHAP synthase activity","type":"related"},{"name":"alkyldihydroxyacetone phosphate synthetase activity","type":"related"},{"name":"alkyldihydroxyacetonephosphate synthase activity","type":"related"},{"name":"dihydroxyacetone-phosphate acyltransferase activity","type":"related"}],"termid":"GO:0008609"}


id: PBO:0085848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the endoplasmic reticulum; protein abundance increases in response to DNA replication stress","termid":"PBO:0085848"}


id: PBO:0002380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat protein","termid":"PBO:0002380"}


id: PBO:0119978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM171B and ITGAV antisense RNA 1","termid":"PBO:0119978"}


id: GO:0001737
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Orientation of hairs in the imaginal disc-derived wing along a proximal-distal axis, such that each cell of the wing produces one wing hair which points in a distal direction.","definition_xrefs":["PMID:11239465","GOC:mtg_sensu","GOC:ascb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of planar polarity","termid":"GO:0001736"},{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"imaginal disc-derived wing hair organization","termid":"GO:0035317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of imaginal disc-derived wing hair orientation","synonyms":[{"name":"establishment of wing hair orientation","type":"exact"}],"termid":"GO:0001737"}


id: MONDO:0004869
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A varicose disease that involves the pelvic region of trunk.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"varicose disease","termid":"MONDO:0008638"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pelvic varices","secondary_identifiers":["UMLS:C0155795","DOID:9742","SCTID:17406005","icd11.foundation:1717989511","ICD9:456.5","MEDGEN:510082","ICD10CM:I86.2"],"synonyms":[{"name":"pelvic region of trunk varicose disease","type":"exact"},{"name":"varicose disease of pelvic region of trunk","type":"exact"}],"termid":"MONDO:0004869","xrefs":{"Monarch":{"xref_id":"0004869"}}}


id: PBO:0085904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; may have a role in lipid metabolism, based on localization to lipid droplets; predicted to be palmitoylated","termid":"PBO:0085904"}


id: GO:1901446
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of response to propan-1-ol.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to alcohol","termid":"GO:1901420"},{"relation_name":"is_a","term_name":"regulation of response to propan-1-ol","termid":"GO:1901445"},{"relation_name":"negatively_regulates","term_name":"response to propan-1-ol","termid":"GO:1901427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of response to propan-1-ol","synonyms":[{"name":"down regulation of response to propan-1-ol","type":"exact"},{"name":"down-regulation of response to propan-1-ol","type":"exact"},{"name":"downregulation of response to propan-1-ol","type":"exact"},{"name":"inhibition of response to propan-1-ol","type":"narrow"}],"termid":"GO:1901446"}


id: GO:0007411
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemotaxis process that directs the migration of an axon growth cone to a specific target site in response to a combination of attractive and repulsive cues.","definition_xrefs":["ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection guidance","termid":"GO:0097485"},{"relation_name":"part_of","term_name":"axonogenesis","termid":"GO:0007409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axon guidance","secondary_identifiers":["GO:0008040","Reactome:R-HSA-422475","Wikipedia:Axon_guidance"],"synonyms":[{"name":"axon chemotaxis","type":"related"},{"name":"axon growth cone guidance","type":"narrow"},{"name":"axon pathfinding","type":"exact"}],"termid":"GO:0007411"}


id: MONDO:0007525
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited connective tissue disorder that is caused by defects in a protein called collagen. Common symptoms include severe joint hypermobility ; congenital hip dislocation; fragile, hyperextensible skin; hypotonia ; and kyphoscoliosis (kyphosis and scoliosis). EDS, arthrochalasia type is caused by changes (mutations) in the COL1A1 gene or the COL1A2 gene and is inherited in an autosomal dominant manner. Treatment and management is focused on preventing serious complications and relieving associated signs and symptoms.","definition_xrefs":["GARD:0002084"],"direct_ancestors":[{"relation_name":"is_a","term_name":"COL1A1-related Ehlers-Danlos syndrome","termid":"MONDO:0100599"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ehlers-Danlos syndrome, arthrochalasia type","secondary_identifiers":["Orphanet:1899","NANDO:1200650","DOID:0080727","MESH:C562625","GARD:2084","MEDGEN:1645042","NCIT:C125701","OMIM:130060","NANDO:2201260","SCTID:4170004","UMLS:C4551623"],"synonyms":[{"name":"AEDS","type":"related"},{"name":"EDS 7A","type":"narrow"},{"name":"EDS 7B","type":"narrow"},{"name":"EDS VII","type":"exact"},{"name":"EDS VII, mutant procollagen type","type":"related"},{"name":"EDS7A (formerly)","type":"related"},{"name":"EDSARTH1","type":"related"},{"name":"Ehlers-Danlos syndrome type 7","type":"exact"},{"name":"Ehlers-Danlos syndrome type 7A (formerly)","type":"related"},{"name":"Ehlers-Danlos syndrome, arthrochalasia type","type":"exact"},{"name":"Ehlers-Danlos syndrome, arthrochalasia type, 1","type":"related"},{"name":"Ehlers-Danlos syndrome, type VII","type":"exact"},{"name":"Ehlers-Danlos syndrome, type VII, autosomal dominant","type":"related"},{"name":"Ehlers-Danlos syndrome, type VIIA, autosomal dominant","type":"related"},{"name":"arthrochalasia EDS","type":"related"},{"name":"arthrochalasia Ehlers-Danlos syndrome","type":"related"},{"name":"arthrochalasis multiplex congenita","type":"related"}],"termid":"MONDO:0007525","xrefs":{"Monarch":{"xref_id":"0007525"}}}


id: MONDO:0033621
data:
  {"annotated_genes":["SJAG_01352"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87511],"is_not":false,"summary":null,"term":"MONDO:0033621"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01352":null},"genotype_count":0,"is_obsolete":false,"name":"spinal muscular atrophy, infantile, James type","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5436669","MEDGEN:1764556","OMIM:619042"],"synonyms":[{"name":"SMAJI","type":"exact"}],"termid":"MONDO:0033621","terms_by_termid":{"MONDO:0033621":null},"xrefs":{"Monarch":{"xref_id":"0033621"}}}


id: PBO:0001243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"origin recognition complex subunit Orp3 (predicted)","termid":"PBO:0001243"}


id: GO:1902249
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to IMP, inosine monophosphate.","definition_xrefs":["GOC:TermGenie","GOC:mah","PMID:4314233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide binding","termid":"GO:0032555"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"IMP binding","termid":"GO:1902249"}


id: PBO:0040079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylsulfatase A","termid":"PBO:0040079"}


id: GO:0099502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulatory process by which increased cytosolic calcium levels lead to the the fusion of synaptic vesicles with the presynaptic active zone membrane by bringing primed synaptic vesicle membrane into contact with membrane presynaptic active zone membrane.","definition_xrefs":["PMID:23060190"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of synaptic vesicle fusion to presynaptic active zone membrane","termid":"GO:0031632"},{"relation_name":"part_of","term_name":"synaptic vesicle exocytosis","termid":"GO:0016079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0061024","GO:0008150","GO:0023052","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"calcium-dependent activation of synaptic vesicle fusion","termid":"GO:0099502"}


id: FYPO:0004614
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which microtubule polymerization, i.e. the addition of tubulin dimers to the plus end of a microtubule, is abnormal.","definition_xrefs":["PomBase:mah","GO:0046785"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-containing complex assembly","termid":"FYPO:0000447"},{"relation_name":"is_a","term_name":"abnormal microtubule dynamics during vegetative growth","termid":"FYPO:0000901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000054","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal microtubule polymerization during vegetative growth","synonyms":[{"name":"abnormal microtubule growth","type":"exact"},{"name":"abnormal microtubule polymerisation","type":"exact"},{"name":"abnormal microtubule polymerisation during vegetative growth","type":"exact"},{"name":"abnormal microtubule polymerization during mitotic cell cycle","type":"related"},{"name":"abnormal microtubule rescue","type":"related"}],"termid":"FYPO:0004614"}


id: PATO:0000384
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A biological sex quality inhering in an individual or a population whose sex organs contain only male gametes.","definition_xrefs":["MGED:MGED"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenotypic sex","termid":"PATO:0001894"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"male","termid":"PATO:0000384"}


id: PBO:0043156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 24","termid":"PBO:0043156"}


id: GO:1903021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of phosphodiesterase activity, acting on 3'-phosphoglycolate-terminated DNA strands.","definition_xrefs":["PMID:12192046","GOC:TermGenie","GO_REF:0000059","GOC:rb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of phosphodiesterase activity, acting on 3'-phosphoglycolate-terminated DNA strands (obsolete GO:1903021)","termid":"GO:1903021"}


id: GO:0090635
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The desmosomal part containing the desmosomal cadherins, desmogleins and desmocollins, that establish contact and adhere to neighboring cells in a Ca2+-dependent manner.","definition_xrefs":["PMID:20066089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"desmosome","termid":"GO:0030057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"extracellular core region of desmosome","synonyms":[{"name":"desmoglea","type":"exact"}],"termid":"GO:0090635"}


id: PBO:0001153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium ion/proton antiporter Kha1 (predicted)","termid":"PBO:0001153"}


id: PBO:0047947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(16)(q23.2)","termid":"PBO:0047947"}


id: PBO:0116618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA Wnt/beta-catenin associated regulator","termid":"PBO:0116618"}


id: GO:0033117
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A vesicle filled with crystalline protein that shows sequence similarities with various esterases.","definition_xrefs":["GOC:ecd","PMID:2307702"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"esterosome","termid":"GO:0033117"}


id: MONDO:0023079
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epidermal nevus vitamin D resistant rickets","termid":"MONDO:0023079","xrefs":{"Monarch":{"xref_id":"0023079"}}}


id: FYPO:0007861
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which sister chromatids become physically detached in a cell that does not form a mitotic spindle or undergo cytokinesis. The DNA and nucleus may go on to divide in the absence of a spindle, with sister chromatids segregated to separate DNA masses.","definition_xrefs":["PomBase:jh","PomBase:mah","PMID:20967237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle process","termid":"FYPO:0002734"},{"relation_name":"part_of","term_name":"nuclear division in absence of mitotic spindle","termid":"FYPO:0007859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000631","FYPO:0000337","FYPO:0000002"],"is_obsolete":false,"name":"sister chromatid separation during nuclear fission","synonyms":[{"name":"chromosome separation during nuclear fission","type":"exact"},{"name":"sister chromatid separation during nuclear division in absence of mitotic spindle","type":"exact"},{"name":"sister chromatid separation during nuclear fission during mitotic cell cycle","type":"related"},{"name":"sister chromatid separation during nuclear fission during vegetative growth","type":"exact"}],"termid":"FYPO:0007861"}


id: _global:acts_upstream_of,_negative_effect
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"c 'acts upstream of, negative effect' p if c is enables f, and f is causally upstream of p, and the direction of f is negative","direct_ancestors":[{"relation_name":"is_a","term_name":"acts_upstream_of","termid":"_global:acts_upstream_of"},{"relation_name":"is_a","term_name":"acts_upstream_of_or_within,_negative_effect","termid":"_global:acts_upstream_of_or_within,_negative_effect"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acts_upstream_of,_negative_effect","secondary_identifiers":["RO:0004035"],"termid":"_global:acts_upstream_of,_negative_effect"}


id: GO:0033957
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of beta-1,4-linkages in the backbone of lambda-carrageenan, resulting in the tetrasaccharide alpha-D-Galp2,6S2-(1->3)-beta-D-Galp2S-(1->4)-alpha-D-Galp2,6S2-(1->3)-D-Galp2S.","definition_xrefs":["EC:3.2.1.162"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"lambda-carrageenase activity","secondary_identifiers":["MetaCyc:3.2.1.162-RXN"],"synonyms":[{"name":"endo-beta-1,4-carrageenose 2,6,2'-trisulfate-hydrolase activity","type":"related"}],"termid":"GO:0033957"}


id: PBO:0062462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 149 pseudogene","termid":"PBO:0062462"}


id: GO:0100017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that negatively regulates single organismal cell-cell adhesion.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cell-cell adhesion by transcription from RNA polymerase II promoter (obsolete GO:0100017)","termid":"GO:0100017"}


id: PBO:0111345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein","termid":"PBO:0111345"}


id: PBO:0052087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch repeat and BTB domain containing 3","termid":"PBO:0052087"}


id: PBO:0088857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating-type transcription factor (Pc-like)","termid":"PBO:0088857"}


id: PBO:0031008
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cell_cycle_arrest_in_mitotic_interphase","termid":"PBO:0031008"}


id: PBO:0077519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 234","termid":"PBO:0077519"}


id: SO:0001597
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A secondary structure variant that compensate for the change made by a previous variant.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_secondary_structure_variant","termid":"SO:0001596"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"compensatory_transcript_secondary_structure_variant","synonyms":[{"name":"compensatory transcript secondary structure variant","type":"exact"}],"termid":"SO:0001597"}


id: PR:O74798
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC2D10.04 gene.","definition_xrefs":["UniProtKB:O74798","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin-related trafficking adapter C2D10.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2D10.04","synonyms":[{"name":"Spom972h-SPBC2D10.04","type":"exact"}],"termid":"PR:O74798"}


id: PBO:0005814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F0-ATPase delta subunit (predicted)","termid":"PBO:0005814"}


id: MONDO:0030835
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmental delay, impaired growth, dysmorphic facies, and axonal neuropathy","secondary_identifiers":["OMIM:619090","UMLS:C5436781","MEDGEN:1765507"],"synonyms":[{"name":"DIGFAN","type":"exact"}],"termid":"MONDO:0030835","xrefs":{"Monarch":{"xref_id":"0030835"}}}


id: GO:0097597
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Specialized organelle found in Giardia species (trophozoite stage) and characterized by a spiral array of microtubules and microtubule-associated structures including dorsal microribbons and crossbridges. The edge of the ventral disc narrows into a lateral crest. The ventral disk mediates mechanical attachment of the trophozoite to the host's intestinal wall, and contains the contractile proteins actinin, alpha-actinin, myosin, and tropomyosin working towards contraction of the disk involved in adherence.","definition_xrefs":["PMID:4777416","ISBN:9780124260207","GOC:giardia","PMID:11432808","PMID:5961344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membraneless organelle","termid":"GO:0043232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ventral disc","synonyms":[{"name":"adhesive disc","type":"related"},{"name":"ventral adhesive disc","type":"exact"},{"name":"ventral disk","type":"related"}],"termid":"GO:0097597"}


id: PBO:0079989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 27","termid":"PBO:0079989"}


id: SO:0001802
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript processing variant whereby polyadenylation of the encoded transcript is increased with respect to the reference.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyadenylation_variant","termid":"SO:0001545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased_polyadenylation_variant","synonyms":[{"name":"increased polyadenylation variant","type":"exact"}],"termid":"SO:0001802"}


id: MONDO:0010144
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tibial hemimelia is a rare congenital anomaly characterized by deficiency of the tibia with a relatively intact fibula.","definition_xrefs":["Orphanet:93322"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemimelia","termid":"MONDO:0016240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"tibial hemimelia","secondary_identifiers":["MESH:C535563","SCTID:79177001","MEDGEN:120551","UMLS:C0265633","OMIM:275220","GARD:8707","icd11.foundation:1111258427"],"synonyms":[{"name":"Thm","type":"related"},{"name":"absence of tibia","type":"related"},{"name":"bilateral absence of the tibia","type":"related"},{"name":"congenital absence of tibia","type":"exact"},{"name":"congenital aplasia and dysplasia of the tibia with intact fibula","type":"exact"},{"name":"congenital longitudinal deficiency of the tibia","type":"exact"},{"name":"tibia, absence of","type":"related"},{"name":"tibial hemimelia","type":"exact"},{"name":"tibial longitudinal meromelia","type":"exact"}],"termid":"MONDO:0010144","xrefs":{"Monarch":{"xref_id":"0010144"}}}


id: GO:0141137
data:
  {"annotated_genes":["SJAG_03441","SJAG_04205","SJAG_04989","SJAG_05020","SJAG_03366","SJAG_00641","SJAG_04758","SJAG_02385","SJAG_03255","SJAG_07011","SJAG_02768","SJAG_00349","SJAG_02500","SJAG_02773","SJAG_01653","SJAG_00441","SJAG_02254","SJAG_04097","SJAG_00581","SJAG_04613","SJAG_01325","SJAG_03576","SJAG_04755","SJAG_02869","SJAG_00735","SJAG_01513","SJAG_00184","SJAG_03776","SJAG_02303","SJAG_00743","SJAG_03758","SJAG_02981","SJAG_03839","SJAG_04038","SJAG_01465","SJAG_04213","SJAG_00440","SJAG_02589","SJAG_01475","SJAG_03944","SJAG_01230","SJAG_03884","SJAG_05192","SJAG_02541","SJAG_02549","SJAG_00769","SJAG_02571","SJAG_00739","SJAG_04194","SJAG_04596","SJAG_00584","SJAG_02314","SJAG_03787","SJAG_02846","SJAG_02170","SJAG_04274","SJAG_02466","SJAG_00868","SJAG_01611","SJAG_00746","SJAG_03579","SJAG_02872","SJAG_03431","SJAG_03668","SJAG_00087","SJAG_01658","SJAG_01622","SJAG_01711","SJAG_02906","SJAG_02447","SJAG_02329","SJAG_04576","SJAG_03694","SJAG_02927","SJAG_02798","SJAG_01111","SJAG_03752","SJAG_03599","SJAG_01110","SJAG_02458","SJAG_01016","SJAG_00896","SJAG_03145","SJAG_03033","SJAG_01804","SJAG_04005","SJAG_00045","SJAG_00873","SJAG_02066","SJAG_05313"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105668,111194,115008,101206,117569,107599,89973,111425,102798,106858,109518,113607,99635,104943,114834,116085,119409,92508,66117,89618,116261,117262,107452,94607,89474,98268,109166,95965,110303,59099,95993,110910,116578,118768,61575,98900,91613,105188,116872,111317,118208,67672,95932,114988,118400,90688,92522,91098,100050,103383,90308,95324,100482,97291,119316,116096,91880,100316,108585,109281,96118,114410,119431,95946,95593,94110,98466,96456,89796,117116,112325,117248,97703,119137,119829,100956,115177,119480,93225,97266,67725,116170,90157,97710,108737,95822,64517,106394,109718,112461],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045815"}]},"cv_name":"biological_process","definition":"An epigenetic process that increases gene expression at specific genomic regions through chromatin remodeling either by modifying higher order chromatin fiber structure, nucleosomal histones, or the cytosine DNA demethylation.","definition_xrefs":["PMID:36618446"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gene expression","termid":"GO:0010628"},{"relation_name":"is_a","term_name":"epigenetic regulation of gene expression","termid":"GO:0040029"}],"gene_count":90,"genes_by_uniquename":{"SJAG_00045":null,"SJAG_00087":null,"SJAG_00184":null,"SJAG_00349":null,"SJAG_00440":null,"SJAG_00441":null,"SJAG_00581":null,"SJAG_00584":null,"SJAG_00641":null,"SJAG_00735":null,"SJAG_00739":null,"SJAG_00743":null,"SJAG_00746":null,"SJAG_00769":null,"SJAG_00868":null,"SJAG_00873":null,"SJAG_00896":null,"SJAG_01016":null,"SJAG_01110":null,"SJAG_01111":null,"SJAG_01230":null,"SJAG_01325":null,"SJAG_01465":null,"SJAG_01475":null,"SJAG_01513":null,"SJAG_01611":null,"SJAG_01622":null,"SJAG_01653":null,"SJAG_01658":null,"SJAG_01711":null,"SJAG_01804":null,"SJAG_02066":null,"SJAG_02170":null,"SJAG_02254":null,"SJAG_02303":null,"SJAG_02314":null,"SJAG_02329":null,"SJAG_02385":null,"SJAG_02447":null,"SJAG_02458":null,"SJAG_02466":null,"SJAG_02500":null,"SJAG_02541":null,"SJAG_02549":null,"SJAG_02571":null,"SJAG_02589":null,"SJAG_02768":null,"SJAG_02773":null,"SJAG_02798":null,"SJAG_02846":null,"SJAG_02869":null,"SJAG_02872":null,"SJAG_02906":null,"SJAG_02927":null,"SJAG_02981":null,"SJAG_03033":null,"SJAG_03145":null,"SJAG_03255":null,"SJAG_03366":null,"SJAG_03431":null,"SJAG_03441":null,"SJAG_03576":null,"SJAG_03579":null,"SJAG_03599":null,"SJAG_03668":null,"SJAG_03694":null,"SJAG_03752":null,"SJAG_03758":null,"SJAG_03776":null,"SJAG_03787":null,"SJAG_03839":null,"SJAG_03884":null,"SJAG_03944":null,"SJAG_04005":null,"SJAG_04038":null,"SJAG_04097":null,"SJAG_04194":null,"SJAG_04205":null,"SJAG_04213":null,"SJAG_04274":null,"SJAG_04576":null,"SJAG_04596":null,"SJAG_04613":null,"SJAG_04755":null,"SJAG_04758":null,"SJAG_04989":null,"SJAG_05020":null,"SJAG_05192":null,"SJAG_05313":null,"SJAG_07011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0006325","GO:0010467"],"is_obsolete":false,"name":"positive regulation of gene expression, epigenetic","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"activation of gene expression, epigenetic","type":"exact"},{"name":"up regulation of gene expression, epigenetic","type":"exact"},{"name":"up-regulation of gene expression, epigenetic","type":"exact"},{"name":"upregulation of gene expression, epigenetic","type":"exact"}],"termid":"GO:0141137","terms_by_termid":{"GO:0045815":null}}


id: PBO:0043044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine and histidine rich domain containing 1","termid":"PBO:0043044"}


id: PBO:0073155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC61 translocon subunit alpha 1","termid":"PBO:0073155"}


id: GO:0033379
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protease is maintained in a secretory granule in a T cell and prevented from moving elsewhere.","definition_xrefs":["GOC:tb","GOC:mah","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of protein location in T cell secretory granule","termid":"GO:0033377"},{"relation_name":"part_of","term_name":"protease localization to T cell secretory granule","termid":"GO:0033375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"maintenance of protease location in T cell secretory granule","synonyms":[{"name":"maintenance of protease localization in T cell secretory granule","type":"related"},{"name":"maintenance of protease localization in T lymphocyte secretory granule","type":"exact"},{"name":"maintenance of protease localization in T-cell secretory granule","type":"exact"},{"name":"maintenance of protease localization in T-lymphocyte secretory granule","type":"exact"}],"termid":"GO:0033379"}


id: PBO:0085896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; localizes to the cytoplasm and nucleus; overexpression affects protein trafficking through the endocytic pathway","termid":"PBO:0085896"}


id: PR:Q9C115
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rec25 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C115"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination protein rec25 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A5.18c","synonyms":[{"name":"Spom972h-rec25","type":"exact"},{"name":"meiotically up-regulated gene 19 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9C115"}


id: GO:0019325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of fructose that occurs in the absence of oxygen.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete anaerobic fructose catabolic process (obsolete GO:0019325)","synonyms":[{"name":"anaerobic fructose breakdown","type":"exact"},{"name":"anaerobic fructose catabolism","type":"exact"},{"name":"anaerobic fructose degradation","type":"exact"}],"termid":"GO:0019325"}


id: GO:0002489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses a peptide antigen of endogenous origin on its cell surface in association with an MHC class Ib protein complex following intracellular transport via a TAP (transporter associated with antigen processing) pathway. The peptide is typically a fragment of a larger endogenous protein which has been degraded within the cell and is dependent on TAP transport from the cytosol to ER for association with the MHC class Ib molecule. Class Ib here refers to non-classical class I molecules, such as those of the HLA-E gene family.","definition_xrefs":["PMID:15928678","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway","termid":"GO:0002488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway, TAP-dependent","synonyms":[{"name":"TAP-dependent antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway","type":"exact"},{"name":"TAP-dependent endogenous peptide antigen processing and presentation via MHC class Ib via ER pathway","type":"exact"},{"name":"endogenous peptide antigen processing and presentation via MHC class Ib via ER pathway, TAP-dependent","type":"exact"}],"termid":"GO:0002489"}


id: SO:0001957
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"RNA secondary structure that affects the stability of an RNA molecule.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0001957 RNA_stability_element (obsolete SO:0001957)","synonyms":[{"name":"rna stability element","type":"related"}],"termid":"SO:0001957"}


id: PBO:0082763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the small-subunit processome; required for nuclear export of tRNAs; forms a complex with Rrp7p; may facilitate binding of Utp8p to aminoacylated tRNAs and their delivery to Los1p for export; conserved from yeast to mammals","termid":"PBO:0082763"}


id: MONDO:0044273
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hypertension, diastolic, resistance to (obsolete MONDO:0044273)","secondary_identifiers":["OMIM:608622"],"synonyms":[{"name":"hypertension, diastolic, resistance to","type":"related"}],"termid":"MONDO:0044273","xrefs":{"Monarch":{"xref_id":"0044273"}}}


id: GO:0047783
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: corticosterone + reduced adrenal ferredoxin + O2 = 18-hydroxycorticosterone + oxidized adrenal ferredoxin + H2O.","definition_xrefs":["EC:1.14.15.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"corticosterone 18-monooxygenase activity","secondary_identifiers":["RHEA:11872","MetaCyc:RXN66-360"],"synonyms":[{"name":"corticosterone 18-hydroxylase activity","type":"exact"},{"name":"corticosterone methyl oxidase activity","type":"related"},{"name":"corticosterone,reduced-adrenal-ferredoxin:oxygen oxidoreductase (18-hydroxylating)","type":"related"}],"termid":"GO:0047783"}


id: PBO:0075359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRY-box transcription factor 1","termid":"PBO:0075359"}


id: PBO:0029840
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cytoskeleton","termid":"PBO:0029840"}


id: GO:0004900
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with erythropoietin and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:ai","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"erythropoietin receptor activity","termid":"GO:0004900"}


id: PBO:0064939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyglutamine binding protein 1","termid":"PBO:0064939"}


id: PBO:0061395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nephronectin","termid":"PBO:0061395"}


id: GO:0008962
data:
  {"annotated_genes":["SJAG_03700"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[60123],"is_not":false,"summary":null,"term":"GO:0008962"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphatidylglycerophosphate + H2O = phosphatidylglycerol + phosphate.","definition_xrefs":["PMID:4292860"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03700":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"phosphatidylglycerophosphatase activity","references_by_uniquename":{"GO_REF:0000002":null},"secondary_identifiers":["EC:3.1.3.27","Reactome:R-HSA-1483197","RHEA:16725","MetaCyc:PGPPHOSPHA-RXN"],"synonyms":[{"name":"PGP phosphatase activity","type":"related"},{"name":"phosphatidylglycerol phosphatase activity","type":"related"},{"name":"phosphatidylglycerol phosphate phosphatase activity","type":"related"},{"name":"phosphatidylglycerophosphate phosphohydrolase activity","type":"related"}],"termid":"GO:0008962","terms_by_termid":{"GO:0008962":null}}


id: PBO:0013067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence orphan, localizing to double strand breaks Dbl7","termid":"PBO:0013067"}


id: PBO:0055733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LMO7 downstream neighbor","termid":"PBO:0055733"}


id: MONDO:0859136
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"Alzahrani-Kuwahara syndrome","secondary_identifiers":["OMIM:619268","MEDGEN:1782127","GARD:18544","UMLS:C5543274"],"termid":"MONDO:0859136","xrefs":{"Monarch":{"xref_id":"0859136"}}}


id: MONDO:1010520
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cleft lip with or without cleft palate that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleft lip with or without cleft palate, non-human animal","termid":"MONDO:1010034"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft lip with or without cleft palate, dog","secondary_identifiers":["OMIA:001140-9615"],"termid":"MONDO:1010520","xrefs":{"Monarch":{"xref_id":"1010520"}}}


id: MONDO:0013375
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any isolated Klippel-Feil syndrome in which the cause of the disease is a mutation in the GDF3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Klippel-Feil syndrome","termid":"MONDO:0001029"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Klippel-Feil syndrome 3, autosomal dominant","secondary_identifiers":["MEDGEN:462317","OMIM:613702","GARD:15691","UMLS:C3150967","DOID:0080591"],"synonyms":[{"name":"GDF3 isolated Klippel-Feil syndrome","type":"exact"},{"name":"KFS3","type":"related"},{"name":"Klippel-FEIL syndrome 3, autosomal dominant","type":"related"},{"name":"Klippel-Feil syndrome 3, autosomal dominant","type":"exact"},{"name":"isolated Klippel-Feil syndrome caused by mutation in GDF3","type":"exact"}],"termid":"MONDO:0013375","xrefs":{"Monarch":{"xref_id":"0013375"}}}


id: GO:0036297
data:
  {"annotated_genes":["SJAG_05280","SJAG_00819","SJAG_03994","SJAG_01410","SJAG_01644","SJAG_00727","SJAG_02690","SJAG_02200","SJAG_02031","SJAG_03068","SJAG_02556","SJAG_02334","SJAG_03734","SJAG_02294"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77161,79796,98965,106792],"is_not":false,"summary":null,"term":"GO:0036297"},{"annotations":[91411],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036299"},{"annotations":[95471,111883,71776,76674,94814],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1901255"},{"annotations":[102468,113440,100876,105020],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036298"}]},"cv_name":"biological_process","definition":"Removal of a DNA interstrand crosslink (a covalent attachment of DNA bases on opposite strands of the DNA) and restoration of the DNA. DNA interstrand crosslinks occur when both strands of duplex DNA are covalently tethered together (e.g. by an exogenous or endogenous agent), thus preventing the strand unwinding necessary for essential DNA functions such as transcription and replication.","definition_xrefs":["GOC:vw","PMID:16464006","PMID:22064477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA repair","termid":"GO:0006281"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00727":null,"SJAG_00819":null,"SJAG_01410":null,"SJAG_01644":null,"SJAG_02031":null,"SJAG_02200":null,"SJAG_02294":null,"SJAG_02334":null,"SJAG_02556":null,"SJAG_02690":null,"SJAG_03068":null,"SJAG_03734":null,"SJAG_03994":null,"SJAG_05280":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0006281","GO:0008150"],"is_obsolete":false,"name":"interstrand cross-link repair","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6783310"],"synonyms":[{"name":"ICL repair","type":"exact"}],"termid":"GO:0036297","terms_by_termid":{"GO:0036297":null,"GO:0036298":null,"GO:0036299":null,"GO:1901255":null}}


id: PBO:0082683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the ESCRT-II complex; ESCRT-II is involved in ubiquitin-dependent sorting of proteins into the endosome; appears to be functionally related to SNF7; involved in glucose derepression","termid":"PBO:0082683"}


id: PBO:0039886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGAP42 pseudogene 3","termid":"PBO:0039886"}


id: PBO:0017537
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae STE7","termid":"PBO:0017537"}


id: MONDO:0017524
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"polydactyly of a biphalangeal thumb","termid":"MONDO:0008269"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polydactyly of a biphalangeal thumb, bilateral","secondary_identifiers":["Orphanet:295146"],"synonyms":[{"name":"preaxial polydactyly type 1, bilateral","type":"exact"}],"termid":"MONDO:0017524","xrefs":{"Monarch":{"xref_id":"0017524"}}}


id: GO:0046722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of lactic acid, 2-hydroxypropanoic acid, by a cell or a tissue.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane lactate transport","termid":"GO:0035879"},{"relation_name":"is_a","term_name":"acid secretion","termid":"GO:0046717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"lactic acid secretion","synonyms":[{"name":"lactate secretion","type":"exact"}],"termid":"GO:0046722"}


id: PBO:0070716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 21","termid":"PBO:0070716"}


id: GO:0086094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An adrenergic receptor signaling pathway that contributes to an increase in frequency or rate of cardiac muscle contraction through phosphorylation and enhancement of the ryanodine receptor, a calcium-activated calcium-release channel found in the membrane of the sarcoplasmic reticulum. An adrenergic receptor-activated adenylate cyclase generates cAMP. cAMP then activates the cAMP-dependent protein kinase A (PKA), which phosphorylates the ryanodine receptor (RyR). PKA-phosphorylation of RyR enhances channel activity by sensitizing the channel to cytosolic calcium. Cytosolic calcium stimulates contractile proteins to promote muscle contraction.","definition_xrefs":["GOC:bf","GOC:BHF","GOC:mtg_cardiac_conduct_nov11","PMID:21099118"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of ryanodine-sensitive calcium-release channel activity by adrenergic receptor signaling pathway involved in positive regulation of cardiac muscle contraction (obsolete GO:0086094)","synonyms":[{"name":"adrenergic receptor signaling pathway involved in positive regulation of cardiac muscle contraction via ryanodine receptor phosphorylation","type":"narrow"}],"termid":"GO:0086094"}


id: FYPO:0006920
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the frequency of DNA recombination at replication fork barriers is decreased.","definition_xrefs":["PMID:31149897","PomBase:mah","PMID:28586299"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA recombination during vegetative growth","termid":"FYPO:0001345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000293","FYPO:0000002"],"is_obsolete":false,"name":"decreased DNA recombination at mitotic DNA replication fork barriers","synonyms":[{"name":"decreased DNA recombination at mitotic DNA replication fork barriers during mitotic cell cycle","type":"related"},{"name":"decreased DNA recombination at mitotic DNA replication fork barriers during vegetative growth","type":"exact"},{"name":"decreased recombination at mitotic DNA replication fork barriers","type":"exact"},{"name":"reduced DNA recombination at mitotic DNA replication fork barriers","type":"exact"}],"termid":"FYPO:0006920"}


id: PBO:0090858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ornithine cyclodeaminase-like protein","termid":"PBO:0090858"}


id: PBO:0018154
data:
  {"annotation_feature_type":"gene","cv_name":"external_link","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WT overexpression expression profiling","termid":"PBO:0018154"}


id: PBO:0050644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hematopoietic SH2 domain containing","termid":"PBO:0050644"}


id: PBO:0068633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 13, pseudogene","termid":"PBO:0068633"}


id: MOD:01152
data:
  {"annotated_genes":["SJAG_00464","SJAG_02766"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[82437,82527],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00123"}]},"cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with a carboxylic acid group.","definition_xrefs":["Unimod:299"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00464":null,"SJAG_02766":null},"genotype_count":0,"is_obsolete":false,"name":"carboxylated residue","references_by_uniquename":{"PMID:36408920":null},"synonyms":[{"name":"Carboxy","type":"related"},{"name":"Carboxylation","type":"related"}],"termid":"MOD:01152","terms_by_termid":{"MOD:00123":null}}


id: GO:0048871
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state at the level of the multicellular organism.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"is_a","term_name":"homeostatic process","termid":"GO:0042592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"multicellular organismal-level homeostasis","termid":"GO:0048871"}


id: GO:0021571
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of rhombomere 5 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order.","definition_xrefs":["GOC:dph","GOC:jid","GO_REF:0000021","GOC:dgh","GOC:curators","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere development","termid":"GO:0021546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 5 development","termid":"GO:0021571"}


id: PBO:0072047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 17","termid":"PBO:0072047"}


id: GO:0035862
data:
  {"annotated_genes":["SJAG_04487"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100804],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035863"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving dITP (deoxyinosine triphosphate (2'-deoxyinosine 5'-triphosphate). dITP is a deoxyinosine phosphate compound having a triphosphate group at the 5'-position.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleotide metabolic process","termid":"GO:0009151"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside triphosphate metabolic process","termid":"GO:0009215"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04487":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"dITP metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"2'-Deoxyinosine 5'-triphosphate metabolic process","type":"exact"},{"name":"2'-Deoxyinosine-5'-triphosphate metabolic process","type":"exact"},{"name":"dITP metabolism","type":"exact"},{"name":"deoxyinosine 5'-triphosphate metabolic process","type":"exact"},{"name":"deoxyinosine triphosphate (2'-deoxyinosine 5'-triphosphate) metabolic process","type":"exact"}],"termid":"GO:0035862","terms_by_termid":{"GO:0035863":null}}


id: PBO:0088688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal protein, implicated in vesicle trafficking or lipid metabolism","termid":"PBO:0088688"}


id: MONDO:1012677
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Waardenburg syndrome that occurs in golden hamsters due to a mutation in the MITF gene created by genetic engineering or gene editing.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Waardenburg syndrome, golden hamster","termid":"MONDO:1011618"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Waardenburg syndrome, MITF-related, golden hamster","secondary_identifiers":["OMIA:001401-10036"],"synonyms":[{"name":"Waardenburg syndrome, type 2A, golden hamster","type":"related"}],"termid":"MONDO:1012677","xrefs":{"Monarch":{"xref_id":"1012677"}}}


id: GO:1901742
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 2-deoxystreptamine.","definition_xrefs":["GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyol metabolic process","termid":"GO:0019751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"2-deoxystreptamine metabolic process","synonyms":[{"name":"2-deoxystreptamine metabolism","type":"exact"}],"termid":"GO:1901742"}


id: PBO:0048758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GM2A pseudogene 1","termid":"PBO:0048758"}


id: SO:0001913
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A bacterial promoter with sigma ecf factor binding dependency. This is a type of bacterial promoters that requires a sigma ECF factor to bind to identified -10 and -35 sequence regions in order to mediate binding of the RNA polymerase to the promoter region as part of transcription initiation.","definition_xrefs":["Invitrogen:kc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial_RNApol_promoter","termid":"SO:0000613"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bacterial_RNApol_promoter_sigma_ecf_element","synonyms":[{"name":"bacterial RNApol promoter sigma ecf ","type":"exact"}],"termid":"SO:0001913"}


id: PBO:0116909
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"this gene is usually silenced in S. pombe","termid":"PBO:0116909"}


id: PBO:0066142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBAK-RBAKDN readthrough","termid":"PBO:0066142"}


id: PBO:0002973
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expression induced by sulfur limitation","termid":"PBO:0002973"}


id: MONDO:0021260
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease or disorder that involves the sensory ganglion.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sensory ganglionopathy","synonyms":[{"name":"disease of sensory ganglion","type":"exact"},{"name":"disease or disorder of sensory ganglion","type":"exact"},{"name":"disorder of sensory ganglion","type":"exact"},{"name":"sensory ganglion disease","type":"exact"},{"name":"sensory ganglion disease or disorder","type":"exact"}],"termid":"MONDO:0021260","xrefs":{"Monarch":{"xref_id":"0021260"}}}


id: PBO:0082348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase of the DEAD-box protein family; accelerates eIF4F-dependent assembly of 48S translation preinitiation complex (PIC), stimulating recruitment of mRNAs with long, structured 5'-UTRs; cooperates with DEAD-box RNA helicase and paralog Ded1p, stimulating PIC attachment and highly processive scanning by the 40S ribosomal subunit; protein abundance increases in response to DNA replication stress","termid":"PBO:0082348"}


id: MONDO:0044251
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete australia antigen (obsolete MONDO:0044251)","secondary_identifiers":["OMIM:209800"],"synonyms":[{"name":"Australia antigen","type":"related"}],"termid":"MONDO:0044251","xrefs":{"Monarch":{"xref_id":"0044251"}}}


id: MONDO:0957404
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pyogenic autoinflammatory syndrome of childhood (obsolete MONDO:0957404)","secondary_identifiers":["Orphanet:324942"],"termid":"MONDO:0957404","xrefs":{"Monarch":{"xref_id":"0957404"}}}


id: PBO:0054479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1879","termid":"PBO:0054479"}


id: MONDO:0015548
data:
  {"annotated_genes":["SJAG_01229","SJAG_01317","SJAG_00421","SJAG_16459"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87241,87240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008695"},{"annotations":[87543],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011781"},{"annotations":[89081],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008458"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Huntington disease and related disorders","termid":"MONDO:0000167"},{"relation_name":"is_a","term_name":"hereditary dementia","termid":"MONDO:0015547"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00421":null,"SJAG_01229":null,"SJAG_01317":null,"SJAG_16459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002039"],"is_obsolete":false,"name":"Huntington disease-like syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:333.99","GARD:20029","MEDGEN:777988","Orphanet:158266","MESH:C580174","SCTID:702376003","UMLS:C3711380"],"synonyms":[{"name":"Huntington disease phenocopy syndrome","type":"exact"}],"termid":"MONDO:0015548","terms_by_termid":{"MONDO:0008458":null,"MONDO:0008695":null,"MONDO:0011781":null},"xrefs":{"Monarch":{"xref_id":"0015548"}}}


id: GO:0005180
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide hormone (obsolete GO:0005180)","synonyms":[{"name":"peptide hormone","type":"exact"}],"termid":"GO:0005180"}


id: GO:1903254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving hercynylselenocysteine.","definition_xrefs":["PMID:24828577","GOC:TermGenie","GO_REF:0000068"],"gene_count":0,"genotype_count":0,"name":"obsolete hercynylselenocysteine metabolic process (obsolete GO:1903254)","synonyms":[{"name":"hercynylselenocysteine metabolism","type":"exact"}],"termid":"GO:1903254"}


id: GO:0046360
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 2-oxobutyrate, the anion of the organic acid 2-oxobutyric acid, which contains a ketone group on carbon 2.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxobutyrate metabolic process","termid":"GO:0046361"},{"relation_name":"is_a","term_name":"short-chain fatty acid biosynthetic process","termid":"GO:0051790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"2-oxobutyrate biosynthetic process","synonyms":[{"name":"2-oxobutyrate anabolism","type":"exact"},{"name":"2-oxobutyrate biosynthesis","type":"exact"},{"name":"2-oxobutyrate formation","type":"exact"},{"name":"2-oxobutyrate synthesis","type":"exact"},{"name":"alpha-ketobutyrate biosynthesis","type":"exact"},{"name":"alpha-ketobutyrate biosynthetic process","type":"exact"}],"termid":"GO:0046360"}


id: PBO:0047452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FCH and mu domain containing endocytic adaptor 2","termid":"PBO:0047452"}


id: PBO:0031153
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_myo-inositol_import","termid":"PBO:0031153"}


id: GO:0050108
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2S,4R)-bornyl diphosphate + H2O = (1R,2S,4R)-borneol + diphosphate.","definition_xrefs":["PMID:42357","EC:3.1.7.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"monoterpenyl-diphosphatase activity","secondary_identifiers":["MetaCyc:MONOTERPENYL-PYROPHOSPHATASE-RXN","RHEA:81371"],"synonyms":[{"name":"bornyl diphosphate hydrolase activity","type":"related"},{"name":"bornyl pyrophosphate hydrolase activity","type":"related"},{"name":"monoterpenyl-diphosphate diphosphohydrolase activity","type":"related"},{"name":"monoterpenyl-pyrophosphatase activity","type":"exact"}],"termid":"GO:0050108"}


id: PATO:0001410
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being marked by narrow lines or grooves, usually parallel.","definition_xrefs":["Biology-online:Biology-online"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"striated","termid":"PATO:0001410"}


id: PBO:0027348
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_level_in_stationary_phase","termid":"PBO:0027348"}


id: PBO:0068204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 511","termid":"PBO:0068204"}


id: PBO:0081979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZSCAN5A antisense RNA 1","termid":"PBO:0081979"}


id: PBO:0058567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6509","termid":"PBO:0058567"}


id: PBO:0077349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 88B","termid":"PBO:0077349"}


id: MONDO:0014239
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"46,XY partial gonadal dysgenesis","termid":"MONDO:0016674"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testicular anomalies with or without congenital heart disease","secondary_identifiers":["MEDGEN:816188","OMIM:615542","UMLS:C3809858","GARD:18360"],"synonyms":[{"name":"TACHD","type":"related"},{"name":"testicular anomalies with or without congenital heart disease","type":"exact"}],"termid":"MONDO:0014239","xrefs":{"Monarch":{"xref_id":"0014239"}}}


id: PBO:0027492
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_acidification_of_growth_medium_in_stationary_phase","termid":"PBO:0027492"}


id: PBO:0011990
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orthologous to S. cerevisiae YKR022C","termid":"PBO:0011990"}


id: MONDO:0859196
data:
  {"annotated_genes":["SJAG_01809"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88023],"is_not":false,"summary":null,"term":"MONDO:0859196"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01809":null},"genotype_count":0,"is_obsolete":false,"name":"Usmani-Riazuddin syndrome, autosomal recessive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:619548","MEDGEN:1794204","UMLS:C5561994"],"termid":"MONDO:0859196","terms_by_termid":{"MONDO:0859196":null},"xrefs":{"Monarch":{"xref_id":"0859196"}}}


id: FYPO:0001381
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000661","FYPO:0000654","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"abnormal protein kinase activity","termid":"FYPO:0001381"}


id: PBO:0043460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-NOT transcription complex subunit 1","termid":"PBO:0043460"}


id: MONDO:0000946
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Involuntary spasm of the outer muscles of the vagina during penetration that results from a psychological cause.","definition_xrefs":["NCIT:C35113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"psychosexual disorder","termid":"MONDO:0000947"},{"relation_name":"is_a","term_name":"vaginismus","termid":"MONDO:0021723"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"psychologic vaginismus","secondary_identifiers":["SCTID:71787009","UMLS:C0042266","DOID:10131","ICD10CM:F52.5","ICD9:306.51","MEDGEN:52970"],"synonyms":[{"name":"functional vaginismus","type":"exact"},{"name":"non-organic vaginismus","type":"exact"},{"name":"psychogenic vaginismus","type":"exact"}],"termid":"MONDO:0000946","xrefs":{"Monarch":{"xref_id":"0000946"}}}


id: PBO:0042465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle associated 4 pseudogene 2","termid":"PBO:0042465"}


id: FYPO:0003995
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of DNA primase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000654","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"abnormal DNA primase activity","termid":"FYPO:0003995"}


id: PR:O14297
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC9E9.15 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14297"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C9E9.15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9E9.15","synonyms":[{"name":"Spom972h-SPAC9E9.15","type":"exact"}],"termid":"PR:O14297"}


id: MONDO:1012578
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Achromatopsia that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of orbital region, non-human animal","termid":"MONDO:1011315"},{"relation_name":"is_a","term_name":"vision disorder, non-human animal","termid":"MONDO:1011367"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"achromatopsia, non-human animal","termid":"MONDO:1012578","xrefs":{"Monarch":{"xref_id":"1012578"}}}


id: MONDO:0021009
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from the salivary glands. It is the most common primary carcinoma of the salivary glands and usually presents as a firm and painless mass. It is characterized by the presence of epidermoid cells, mucus producing cells, and cells of intermediate type. The majority of cases have a favorable outcome.","definition_xrefs":["NCIT:C5908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salivary gland carcinoma","termid":"MONDO:0000521"},{"relation_name":"is_a","term_name":"oral cavity mucoepidermoid carcinoma","termid":"MONDO:0044964"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"salivary gland mucoepidermoid carcinoma","secondary_identifiers":["DOID:0081293","MEDGEN:277630","SCTID:423708008","UMLS:C1335903"],"synonyms":[{"name":"mucoepidermoid carcinoma of salivary gland","type":"exact"},{"name":"mucoepidermoid carcinoma of the salivary gland","type":"exact"},{"name":"saliva-secreting gland mucoepidermoid carcinoma","type":"exact"},{"name":"salivary gland mucoepidermoid carcinoma","type":"exact"}],"termid":"MONDO:0021009","xrefs":{"Monarch":{"xref_id":"0021009"}}}


id: PBO:0087986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA:pseudouridine synthase; catalyzes the conversion of uridine to pseudouridine at position 31 in cytoplasmic and mitochondrial tRNAs; mutation of Asp168 to Ala abolishes enzyme activity; not essential for viability","termid":"PBO:0087986"}


id: MONDO:0021083
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital fibrosis of extraocular muscles in which the cause of the disease is a mutation in the KIF21A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"congenital fibrosis of extraocular muscles","termid":"MONDO:0007614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"congenital fibrosis of extraocular muscles type 1","secondary_identifiers":["DOID:0081015","MEDGEN:376943","UMLS:C1851102","OMIM:135700"],"synonyms":[{"name":"CFEOM1","type":"exact"},{"name":"Feom1 locus","type":"related"},{"name":"KIF21A congenital fibrosis of extraocular muscles","type":"exact"},{"name":"blepharoptosis with absent eye movements","type":"related"},{"name":"congenital fibrosis of extraocular muscles caused by mutation in KIF21A","type":"exact"},{"name":"fibrosis of extraocular muscles, congenital, 1","type":"exact"},{"name":"fibrosis of extraocular muscles, congenital, 3B","type":"related"},{"name":"ophthalmoplegia, congenital","type":"related"}],"termid":"MONDO:0021083","xrefs":{"Monarch":{"xref_id":"0021083"}}}


id: PBO:0081063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZCRB1 pseudogene 1","termid":"PBO:0081063"}


id: PBO:0051027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin like growth factor binding protein 7","termid":"PBO:0051027"}


id: PBO:0013121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic chromosome segregation protein Dbl2","termid":"PBO:0013121"}


id: PATO:0002177
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A deviation quality inhering in a bearer by virtue of the bearer's changed direction of position towards the middle.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deviation","termid":"PATO:0002175"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deviation towards the medial side","termid":"PATO:0002177"}


id: PBO:0043277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain family 3 member B","termid":"PBO:0043277"}


id: PBO:0043618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COMM domain containing 7","termid":"PBO:0043618"}


id: GO:0050165
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + pantetheine = ADP + pantetheine 4'-phosphate.","definition_xrefs":["EC:2.7.1.34","MetaCyc:PANTETHEINE-KINASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016301","GO:0003824"],"is_obsolete":false,"name":"pantetheine kinase activity","secondary_identifiers":["RHEA:22472"],"synonyms":[{"name":"ATP:pantetheine 4'-phosphotransferase activity","type":"related"},{"name":"pantetheine kinase (phosphorylating)","type":"related"}],"termid":"GO:0050165"}


id: PBO:0046748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex component 3 like 4","termid":"PBO:0046748"}


id: MONDO:0001226
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute inflammation of the conjunctiva characterized by pink or red color in the eyes.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute conjunctivitis","termid":"MONDO:0001214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"acute contagious conjunctivitis","secondary_identifiers":["DOID:11213","ICD9:041.89","MEDGEN:272038","SCTID:399219006","UMLS:C1313983","NCIT:C35704"],"synonyms":[{"name":"Contagious opthalmia","type":"exact"},{"name":"conjunctivitis infective","type":"exact"},{"name":"pinkeye","type":"exact"}],"termid":"MONDO:0001226","xrefs":{"Monarch":{"xref_id":"0001226"}}}


id: PBO:0072548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulatory associated protein of MTOR complex 1","termid":"PBO:0072548"}


id: PBO:0090703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial conserved fungal membrane protein","termid":"PBO:0090703"}


id: PBO:0091925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane brefeldin A efflux transporter Bfr1","termid":"PBO:0091925"}


id: PR:P87148
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein YIF1A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03637","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein yif1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25H2.06c","secondary_identifiers":["UniProtKB:P87148"],"synonyms":[{"name":"Spom972h-YIF1A","type":"exact"},{"name":"YIP1-interacting factor 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"heavy metal resistance factor 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87148"}


id: FYPO:0004431
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to 2-bromo-2-(((4-methylphenyl)sulfonyl)methyl)-1-indanone. Cells stop growing (and may die) at a concentration of 2-bromo-2-(((4-methylphenyl)sulfonyl)methyl)-1-indanone that allows wild type cells to grow.","definition_xrefs":["PomBase:mah","PMID:18204818"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0002683","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to 2-bromo-2-(((4-methylphenyl)sulfonyl)methyl)-1-indanone","synonyms":[{"name":"hypersensitive to 2-bromo-2-(((4-methylphenyl)sulfonyl)methyl)-1-indanone","type":"exact"},{"name":"sensitive to 2-bromo-2-(((4-methylphenyl)sulfonyl)methyl)-1-indanone during mitotic cell cycle","type":"related"},{"name":"sensitive to 2-bromo-2-(((4-methylphenyl)sulfonyl)methyl)-1-indanone during vegetative growth","type":"exact"}],"termid":"FYPO:0004431"}


id: PBO:0001652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myo-inositol transporter Itr1","termid":"PBO:0001652"}


id: PBO:0061887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opioid binding protein/cell adhesion molecule like","termid":"PBO:0061887"}


id: GO:0098896
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a postsynaptic early endosome.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early endosome membrane","termid":"GO:0031901"},{"relation_name":"is_a","term_name":"postsynaptic endosome membrane","termid":"GO:0098895"},{"relation_name":"part_of","term_name":"postsynaptic early endosome","termid":"GO:0098842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005768","GO:0005737"],"is_obsolete":false,"name":"postsynaptic early endosome membrane","termid":"GO:0098896"}


id: MONDO:0005462
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm that originates in the neuroectoderm. The neuroectoderm constitutes the portion of the ectoderm of the early embryo that gives rise to the central and peripheral nervous systems and includes some glial cell precursors.","definition_xrefs":["NCIT:C3716"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete germ cell and embryonal cancer (obsolete MONDO:0002510)","termid":"MONDO:0002510"},{"relation_name":"excluded_subClassOf","term_name":"nervous system cancer","termid":"MONDO:0005872"},{"relation_name":"is_a","term_name":"embryonal neoplasm","termid":"MONDO:0005564"},{"relation_name":"is_a","term_name":"neuroepithelial neoplasm","termid":"MONDO:0021193"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primitive neuroectodermal tumor","secondary_identifiers":["ONCOTREE:PNET","UMLS:C0206663","EFO:0005235","MEDGEN:64627","MESH:D017599","DOID:171","ICDO:9503/3","ICDO:9473/3"],"synonyms":[{"name":"PNET","type":"exact"},{"name":"neuroectodermal neoplasm","type":"exact"},{"name":"neuroectodermal tumor","type":"exact"},{"name":"neuroectodermal tumour","type":"exact"},{"name":"neuroepithelioma","type":"related"},{"name":"primitive neuroectodermal neoplasm","type":"exact"},{"name":"primitive neuroectodermal tumor","type":"exact"},{"name":"primitive neuroectodermal tumor (PNET)","type":"exact"},{"name":"primitive neuroectodermal tumour (PNET)","type":"exact"}],"termid":"MONDO:0005462","xrefs":{"Monarch":{"xref_id":"0005462"}}}


id: PBO:0068432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 2","termid":"PBO:0068432"}


id: PATO:0001464
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality that is equal to the potential energy per unit charge associated with a static (time-invariant) electric field, also called the electrostatic potential.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Electric_potential"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"electric potential","termid":"PATO:0001464"}


id: PBO:0071147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 11","termid":"PBO:0071147"}


id: GO:0019937
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The autocatalytic formation of isopeptide bonds by ligation of peptidyl-lysine and peptidyl-asparagine residues; known to occur in the capsid of some bacteriophage, such as HK97, where it is thought to provide a mechanism for stabilizing the capsid.","definition_xrefs":["RESID:AA0294"],"gene_count":0,"genotype_count":0,"name":"obsolete protein catenane formation via N6-(L-isoaspartyl)-L-lysine, autocatalytic (obsolete GO:0019937)","termid":"GO:0019937"}


id: PBO:0027125
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-spores_sensitive_to_heat","termid":"PBO:0027125"}


id: PBO:0047200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 217 member A","termid":"PBO:0047200"}


id: PBO:0068139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 446","termid":"PBO:0068139"}


id: PBO:0074492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snail family transcriptional repressor 3","termid":"PBO:0074492"}


id: PR:P87314
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hip1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87314"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein hir1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC31F10.13c","synonyms":[{"name":"Spom972h-hip1","type":"exact"},{"name":"histone transcription regulator 1 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87314"}


id: PBO:0090190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Pho7","termid":"PBO:0090190"}


id: PBO:0091593
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"I:g.5142627_5142628insG","termid":"PBO:0091593"}


id: PBO:0072562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS related 2","termid":"PBO:0072562"}


id: PBO:0054867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2281","termid":"PBO:0054867"}


id: MONDO:0012594
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"complement deficiency","termid":"MONDO:0003832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"complement factor I deficiency","secondary_identifiers":["DOID:0050419","UMLS:C3463916","Orphanet:200418","GARD:17098","MEDGEN:483045","MESH:C572568","NANDO:2200798","OMIM:610984","NANDO:2200790"],"synonyms":[{"name":"C3 inactivator deficiency","type":"exact"},{"name":"CFID","type":"related"},{"name":"complement Factor 1 deficiency","type":"related"},{"name":"complement component 3 inactivator deficiency","type":"exact"},{"name":"complement factor I deficiency","type":"exact"},{"name":"immunodeficiency with factor I anomaly","type":"related"}],"termid":"MONDO:0012594","xrefs":{"Monarch":{"xref_id":"0012594"}}}


id: PBO:0011436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retrotransposable element/transposon Tf2-type","termid":"PBO:0011436"}


id: PBO:0083976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glucose-responsive transcription factor; regulates expression of several glucose transporter (HXT) genes in response to glucose; binds to promoters and acts both as a transcriptional activator and repressor; recruits Tup1p/Cyc8p to target gene promoters; RGT1 has a paralog, EDS1, that arose from the whole genome duplication","termid":"PBO:0083976"}


id: MONDO:0011771
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare neuromuscular disease characterized by progressive muscular weakness and atrophy predominantly affecting distal parts of limbs, later involvement of proximal and trunk muscles with marked hyperlordosis and late diaphragmatic dysfunction.","definition_xrefs":["Orphanet:139547"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spinal muscular atrophy","termid":"MONDO:0001516"},{"relation_name":"is_a","term_name":"neuronopathy, distal hereditary motor, autosomal recessive","termid":"MONDO:0015363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005559","MONDO:0005244"],"is_obsolete":false,"name":"neuronopathy, distal hereditary motor, autosomal recessive 3","secondary_identifiers":["MEDGEN:337659","MESH:C564626","DOID:0111211","GARD:16956","OMIM:607088","UMLS:C1846823"],"synonyms":[{"name":"HMN 3","type":"related"},{"name":"HMN 4","type":"related"},{"name":"autosomal recessive distal spinal muscular atrophy type 3","type":"exact"},{"name":"dHMN3","type":"related"},{"name":"dHMN3 and dHMN4","type":"exact"},{"name":"dHMN4","type":"related"},{"name":"dSMA3","type":"exact"},{"name":"distal hereditary motor neuropathy type 3 and type 4","type":"exact"},{"name":"distal spinal muscular atrophy type 3","type":"exact"},{"name":"neuronopathy, distal hereditary motor, type 3","type":"related"},{"name":"neuronopathy, distal hereditary motor, type 4","type":"related"},{"name":"neuropathy, distal hereditary motor, type 4","type":"related"},{"name":"spinal muscular atrophy, chronic distal, autosomal recessive","type":"exact"},{"name":"spinal muscular atrophy, distal, autosomal recessive, 3","type":"related"}],"termid":"MONDO:0011771","xrefs":{"Monarch":{"xref_id":"0011771"}}}


id: GO:0048165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stage in oogenesis when the antral spaces fuse to form a single antral space. The oocyte is suspended in the cumulus oophorous and the first polar body in the perivitelline space.","definition_xrefs":["ISBN:0198542771","GOC:jid","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mammalian oogenesis stage","termid":"GO:0022605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fused antrum stage","synonyms":[{"name":"mammalian oogenesis stage 8","type":"exact"}],"termid":"GO:0048165"}


id: GO:0072745
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an antimycin A stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to antimycin A","termid":"GO:1901325"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to antimycin A","termid":"GO:0072745"}


id: PR:O14320
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- coa1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14320"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16E9.03c","synonyms":[{"name":"Spom972h-coa1","type":"exact"}],"termid":"PR:O14320"}


id: PBO:0034045
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-developmentally_induces","termid":"PBO:0034045"}


id: PBO:0050484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOXA11 antisense RNA","termid":"PBO:0050484"}


id: FYPO:0001463
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the intracellular calcium ion (Ca2+) concentration briefly increases abnormally, or does not change, immediately following an extracellular Ca2+ stimulus. Normally, the intracellular Ca2+ concentration increases to a peak in a \\\"burst\\\" within one minute, and then decreases to a new steady-state concentration.","definition_xrefs":["PomBase:mah","PMID:21811607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered cellular calcium level","termid":"FYPO:0001462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal immediate intracellular calcium spike following extracellular calcium stimulus","synonyms":[{"name":"abnormal immediate intracellular calcium spike following extracellular calcium stimulus during mitotic cell cycle","type":"related"},{"name":"abnormal immediate intracellular calcium spike following extracellular calcium stimulus during vegetative growth","type":"exact"}],"termid":"FYPO:0001463"}


id: MONDO:0017374
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete polydactyly (obsolete MONDO:0017374)","termid":"MONDO:0017374","xrefs":{"Monarch":{"xref_id":"0017374"}}}


id: PBO:0058379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4751","termid":"PBO:0058379"}


id: GO:0051744
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: protochlorophyllide a + NADP+ = 3,8-divinyl protochlorophyllide a + NADPH + H+.","definition_xrefs":["GOC:rynl"],"gene_count":0,"genotype_count":0,"name":"obsolete 3,8-divinyl protochlorophyllide a 8-vinyl-reductase (NADPH) activity (obsolete GO:0051744)","termid":"GO:0051744"}


id: MONDO:0700246
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any eye disorder in which the cause of the disease is a variant in the PAX6 gene itself or a variant within another locus that results in defective regulation of the PAX6 gene.","definition_xrefs":["PMID:24290376","PMID:26394807","PMID:17679951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"ocular dysgenesis caused by defects in PAX6 regulation","termid":"MONDO:0700246","xrefs":{"Monarch":{"xref_id":"0700246"}}}


id: FYECO:0000023
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in the presence of cAMP. Presence can either imply exogenous addition of the chemical or the action of adenylate cyclase.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000023 presence of 3',5'-cyclic AMP (obsolete FYECO:0000023)","termid":"FYECO:0000023"}


id: PBO:0056338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP3K20 antisense RNA 1","termid":"PBO:0056338"}


id: PBO:0067268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 342, pseudogene","termid":"PBO:0067268"}


id: PBO:0120356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYRIB antisense RNA 1","termid":"PBO:0120356"}


id: PBO:0088215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino acid/polyamine transporter (predicted)","termid":"PBO:0088215"}


id: PBO:0011454
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"k_cat(x10-5sec-1) for base excision activity of 1,N(6)-ethenoadenine = 5.3","termid":"PBO:0011454"}


id: GO:0061792
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Steps required to transform an immature secretory vesicle into a mature secretory vesicle. Typically proceeds through homotypic membrane fusion and membrane remodeling.","definition_xrefs":["GOC:dph","GOC:PARL","PMID:16618809","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule organization","termid":"GO:0033363"},{"relation_name":"is_a","term_name":"anatomical structure maturation","termid":"GO:0071695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"secretory granule maturation","termid":"GO:0061792"}


id: GO:0036206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of expression of a histone-encoding gene. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein.","definition_xrefs":["GOC:bf","GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone gene expression (obsolete GO:0036206)","synonyms":[{"name":"regulation of expression of histone-encoding gene","type":"exact"}],"termid":"GO:0036206"}


id: GO:0045257
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The enzyme that catalyzes the oxidation of succinate and ubiquinone to fumarate and ubiquinol; involved in aerobic respiration, repressed in anaerobic respiration.","definition_xrefs":["GOC:kd","ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete succinate dehydrogenase complex (ubiquinone) (obsolete GO:0045257)","termid":"GO:0045257"}


id: MONDO:0022263
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital hepatic fibrosis (obsolete MONDO:0022263)","termid":"MONDO:0022263","xrefs":{"Monarch":{"xref_id":"0022263"}}}


id: GO:0033785
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-alpha,beta-D-heptose-7-phosphate + ATP = D-beta-D-heptose-1,7-bisphosphate + ADP.","definition_xrefs":["RHEA:27473"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate kinase activity","termid":"GO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016301","GO:0003674"],"is_obsolete":false,"name":"heptose 7-phosphate kinase activity","secondary_identifiers":["EC:2.7.1.167","MetaCyc:RXN0-4341"],"synonyms":[{"name":"D-alpha,beta-D-heptose 7-phosphate 1-kinase activity","type":"exact"}],"termid":"GO:0033785"}


id: MONDO:0002678
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm arising from the deep soft tissues in children. It is characterized by the presence of spindle-shaped fibroblasts and collagenous stroma formation in a herringbone growth pattern.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibrosarcoma","termid":"MONDO:0005164"},{"relation_name":"is_a","term_name":"childhood malignant neoplasm","termid":"MONDO:0006517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pediatric fibrosarcoma","secondary_identifiers":["DOID:3520","NANDO:2200060","UMLS:C0279981","MEDGEN:124685","NCIT:C8088"],"synonyms":[{"name":"childhood fibrosarcoma","type":"exact"},{"name":"fibrosarcoma","type":"broad"},{"name":"pediatric fibrosarcoma","type":"exact"}],"termid":"MONDO:0002678","xrefs":{"Monarch":{"xref_id":"0002678"}}}


id: MONDO:0006746
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease characterized by fibrotic thickening of the endocardium, particularly the right and/or left inflow tracts. The disease often involves the atrioventricular valves, leading to valvular regurgitaion. It most commonly occurs in children living within 15 degrees of the equator.","definition_xrefs":["NCIT:C34585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"restrictive cardiomyopathy","termid":"MONDO:0005201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"endomyocardial fibrosis","secondary_identifiers":["DOID:12932","EFO:1000921","MedDRA:10014800","icd11.foundation:365224859","MEDGEN:107513","ICD9:425.0","MESH:D004719","GARD:6340","NORD:1092","UMLS:C0553980"],"synonyms":[{"name":"African endomyocardial fibrosis","type":"exact"},{"name":"endomyocardial sclerosis","type":"exact"},{"name":"obscure African cardiomyopathy","type":"exact"}],"termid":"MONDO:0006746","xrefs":{"Monarch":{"xref_id":"0006746"}}}


id: PBO:0000893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-binding protein (predicted)","termid":"PBO:0000893"}


id: PBO:0109646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMPRSS11B N-terminal like (pseudogene)","termid":"PBO:0109646"}


id: PBO:0085731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in the synthesis of GlcNAc-PI; GlcNAc-PI is the first intermediate in the synthesis of glycosylphosphatidylinositol (GPI) anchors; homologous to the human PIG-C protein; GlcNAc-PI stands for N-acetylglucosaminyl phosphatidylinositol","termid":"PBO:0085731"}


id: PBO:0056767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase like 18","termid":"PBO:0056767"}


id: FYPO:0007162
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of karyogamy involved in conjugation with cellular fusion is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear fusion during mating","termid":"FYPO:0000510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000301","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased duration of nuclear fusion during mating","synonyms":[{"name":"increased duration of karyogamy","type":"exact"},{"name":"increased duration of karyogamy involved in conjugation with cellular fusion","type":"exact"},{"name":"prolonged nuclear fusion during mating","type":"exact"}],"termid":"FYPO:0007162"}


id: PBO:0088691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBF/Mak21 family Noc4","termid":"PBO:0088691"}


id: GO:0019624
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of atrazine, a triazine ring-containing herbicide, into isopropylamine.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrazine catabolic process","termid":"GO:0019381"},{"relation_name":"is_a","term_name":"primary amino compound metabolic process","termid":"GO:1901160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrazine catabolic process to isopropylamine","synonyms":[{"name":"atrazine breakdown to isopropylamine","type":"exact"},{"name":"atrazine degradation to isopropylamine","type":"exact"}],"termid":"GO:0019624"}


id: PBO:0086398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative dihydrofolate synthetase; similar to E. coli folylpolyglutamate synthetase/dihydrofolate synthetase; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; RMA1 has a paralog, FOL3, that arose from the whole genome duplication","termid":"PBO:0086398"}


id: PBO:0051993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JAKMIP3 antisense RNA 1","termid":"PBO:0051993"}


id: MONDO:0018102
data:
  {"annotated_genes":["SJAG_00638"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88190],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007376"}]},"cv_name":"mondo","definition":"The term corneal dystrophy embraces a heterogeneous group of bilateral genetically determined non-inflammatory corneal diseases that are usually restricted to the cornea. The designation is imprecise but remains in vogue because of its clinical value.","definition_xrefs":["Orphanet:34533"],"direct_ancestors":[{"relation_name":"is_a","term_name":"corneal disorder","termid":"MONDO:0000942"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00638":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"corneal dystrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0010036","SCTID:5587004","DOID:2566","HP:0001131","ICD9:371.5","ICD9:371.50","MEDGEN:3619","MedDRA:10011005","MESH:D003317","icd11.foundation:1291475891","NCIT:C34513"],"synonyms":[{"name":"corneal dystrophy","type":"exact"},{"name":"corneal dystrophy (disease)","type":"exact"}],"termid":"MONDO:0018102","terms_by_termid":{"MONDO:0007376":null},"xrefs":{"Monarch":{"xref_id":"0018102"}}}


id: SO:0002227
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant extending the CDS, that causes elongation of the resulting polypeptide sequence.","definition_xrefs":["PMID:15864293","PMID:32020195","PMID:27984720","PMID:14732127","PMID:31216041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CDS","termid":"SO:0000316"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDS_extension","synonyms":[{"name":"CDS Extension","type":"exact"},{"name":"elongated CDS","type":"exact"},{"name":"elongated_CDS","type":"exact"}],"termid":"SO:0002227"}


id: PBO:0116303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Repressor of G1 transcription; binds to SCB binding factor (SBF) at SCB target promoters in early G1; phosphorylation of Whi5p by G1 cyclin (Cln)/Cdc28p relieves repression and promoter binding by Whi5p, drives nuclear export, and contributes to both the determination of critical cell size at START and cell fate; dephosphorylated and re-imported into the nucleus post-START during the starvation response, reversing commitment; expression is repressed in M/early G phase; analogous to metazoan Rb","termid":"PBO:0116303"}


id: PBO:0082447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bZIP transcriptional activator of amino acid biosynthetic genes;  activator responds to amino acid starvation; expression is tightly regulated at both the transcriptional and translational levels; contains four upstream open reading frames (uORFs) in 5' untranslated region which regulate translation","termid":"PBO:0082447"}


id: GO:0034075
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: oxidosqualene + H2O = arabidiol ((13R,14R,17E)-malabarica-17,21-diene-3beta,14-diol).","definition_xrefs":["PMID:16774269","PMID:17474751","GOC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidosqualene cyclase activity","termid":"GO:0031559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"arabidiol synthase activity","secondary_identifiers":["EC:4.2.1.124","MetaCyc:RXN-9684","RHEA:31035"],"termid":"GO:0034075"}


id: MONDO:0957018
data:
  {"annotated_genes":["SJAG_04541","SJAG_00400","SJAG_04569","SJAG_01884","SJAG_04969","SJAG_02039","SJAG_03805","SJAG_04290","SJAG_03151","SJAG_04380","SJAG_04118","SJAG_05239"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87128],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012429"},{"annotations":[86957],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012471"},{"annotations":[86960],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012472"},{"annotations":[87048],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014007"},{"annotations":[89090],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014629"},{"annotations":[88539],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054698"},{"annotations":[88347],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054700"},{"annotations":[87211],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054699"},{"annotations":[88985],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0968983"},{"annotations":[88218],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024541"},{"annotations":[88069],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013818"},{"annotations":[87429],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010523"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autoinflammatory syndrome","termid":"MONDO:0019751"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00400":null,"SJAG_01884":null,"SJAG_02039":null,"SJAG_03151":null,"SJAG_03805":null,"SJAG_04118":null,"SJAG_04290":null,"SJAG_04380":null,"SJAG_04541":null,"SJAG_04569":null,"SJAG_04969":null,"SJAG_05239":null},"genotype_count":0,"is_obsolete":false,"name":"autoinflammatory syndrome of childhood","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:21427","MEDGEN:1842803","Orphanet:319719","UMLS:C5680962"],"termid":"MONDO:0957018","terms_by_termid":{"MONDO:0010523":null,"MONDO:0012429":null,"MONDO:0012471":null,"MONDO:0012472":null,"MONDO:0013818":null,"MONDO:0014007":null,"MONDO:0014629":null,"MONDO:0024541":null,"MONDO:0054698":null,"MONDO:0054699":null,"MONDO:0054700":null,"MONDO:0968983":null},"xrefs":{"Monarch":{"xref_id":"0957018"}}}


id: PBO:0059145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MPL proto-oncogene, thrombopoietin receptor","termid":"PBO:0059145"}


id: PBO:0069291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 547, pseudogene","termid":"PBO:0069291"}


id: MOD:00286
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to L-cysteinyl molybdenum bis(molybdopterin guanine dinucleotide).","definition_xrefs":["RESID:AA0281","Unimod:424#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molybdopterin guanine dinucleotide","termid":"MOD:01167"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-cysteinyl molybdenum bis(molybdopterin guanine dinucleotide)","synonyms":[{"name":"2-amino-5,6-dimercapto-7-methyl-3,7,8a,9-tetrahydro-8-oxa-1,3,9,10-tetraazaanthracen-4-one guanosine dinucleotide","type":"exact"},{"name":"L-cysteinyl molybdenum bis(molybdopterin guanine dinucleotide)","type":"exact"},{"name":"MolybdopterinGD","type":"related"},{"name":"bis[8-amino-1a,2,4a,5,6,7,10-heptahydro-2-(trihydrogen diphosphate 5'-ester with guanosine)methyl-6-oxo-3,4-disulfanyl-pteridino[6,7-5,6]pyranoato-S3,S4]-cystein-S-yl-molybdenum","type":"exact"},{"name":"molybdenum bis(molybdopterin guanine dinucleotide)","type":"related"}],"termid":"MOD:00286"}


id: GO:0102898
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H+ + levopimaradienol + NADPH + O2 = levopiramadiene-diol + NADP + H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete levopimaradienol hydroxylase activity (obsolete GO:0102898)","termid":"GO:0102898"}


id: PR:O94527
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A WD and tetratricopeptide repeats protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03590","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein iqw1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC609.03","secondary_identifiers":["UniProtKB:O94527"],"synonyms":[{"name":"Spom972h-WDTC1","type":"exact"}],"termid":"PR:O94527"}


id: MONDO:0056795
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cause of male infertility characterized by X-linked inheritance in which only Sertoli cells (cells that nurture the immature sperm) line the seminiferous tubules (tubes inside the testicles where sperm develop) and there are not any sperm cells present in the seminiferous tubules.","definition_xrefs":["GARD:0008406"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"X-linked spermatogenic failure 1","secondary_identifiers":["MESH:D054331","SCTID:73465006","ICD9:752.89","DOID:0070189","NCIT:C168988","GARD:8406","OMIM:305700"],"synonyms":[{"name":"Del Castillo syndrome","type":"exact"},{"name":"Germinal cell aplasia","type":"exact"},{"name":"SPGFX1","type":"exact"},{"name":"Sertoli cell-only syndrome","type":"exact"},{"name":"spermatogenic failure, X-linked, type 1","type":"exact"}],"termid":"MONDO:0056795","xrefs":{"Monarch":{"xref_id":"0056795"}}}


id: PBO:0046554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group H member 8, envelope","termid":"PBO:0046554"}


id: PBO:0041396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C6","termid":"PBO:0041396"}


id: PBO:0052151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium inwardly rectifying channel subfamily J member 1","termid":"PBO:0052151"}


id: SO:0000849
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A component of the three-prime long terminal repeat.","definition_xrefs":["PMID:8649407"],"direct_ancestors":[{"relation_name":"is_a","term_name":"LTR_component","termid":"SO:0000848"},{"relation_name":"part_of","term_name":"three_prime_LTR","termid":"SO:0000426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_LTR_component","synonyms":[{"name":"3' long terminal repeat component","type":"exact"},{"name":"three prime LTR component","type":"exact"}],"termid":"SO:0000849"}


id: PBO:0079692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin like 5","termid":"PBO:0079692"}


id: PBO:0055157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2576","termid":"PBO:0055157"}


id: PBO:0070950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18a pseudogene 5","termid":"PBO:0070950"}


id: FYPO:0007851
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which spindle assembly does not occur during the first meiotic nuclear division.","definition_xrefs":["PMID:34346498","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"},{"relation_name":"is_a","term_name":"abnormal spindle assembly during meiosis I","termid":"FYPO:0007745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0000631","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished spindle assembly during meiosis I","synonyms":[{"name":"abolished meiosis I spindle assembly","type":"exact"},{"name":"abolished spindle assembly during first meiotic nuclear division","type":"exact"}],"termid":"FYPO:0007851"}


id: GO:0046811
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of histone deacetylase, which catalyzes of the removal of acetyl groups from histones, proteins complexed to DNA in chromatin and chromosomes.","definition_xrefs":["PMID:10482575","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"},{"relation_name":"is_a","term_name":"histone deacetylase regulator activity","termid":"GO:0035033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0004857"}],"interesting_parent_ids":["GO:0003674","GO:0004857","GO:0140678","GO:0030234","GO:0098772"],"is_obsolete":false,"name":"histone deacetylase inhibitor activity","termid":"GO:0046811"}


id: PBO:0086831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function identified by gene-trapping; microarray-based expression analysis, and genome-wide homology searching; partially overlaps a Ty1 element","termid":"PBO:0086831"}


id: PBO:0080748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X antigen family member 3","termid":"PBO:0080748"}


id: GO:2001238
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of extrinsic apoptotic signaling pathway.","definition_xrefs":["GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of apoptotic signaling pathway","termid":"GO:2001235"},{"relation_name":"is_a","term_name":"regulation of extrinsic apoptotic signaling pathway","termid":"GO:2001236"},{"relation_name":"positively_regulates","term_name":"extrinsic apoptotic signaling pathway","termid":"GO:0097191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of extrinsic apoptotic signaling pathway","synonyms":[{"name":"positive regulation of extrinsic apoptosis","type":"narrow"},{"name":"positive regulation of extrinsic apoptotic signalling pathway","type":"exact"}],"termid":"GO:2001238"}


id: GO:0042071
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a leucokinin, any of several octapeptide hormones found in insects, and transmitting the signal to initiate a change in cell activity.","definition_xrefs":["PMID:2716741","GOC:mah","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor activity","termid":"GO:0038023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"leucokinin receptor activity","termid":"GO:0042071"}


id: PBO:0001610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial valine-tRNA ligase Vrs2/Vas2","termid":"PBO:0001610"}


id: PBO:0055636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3075","termid":"PBO:0055636"}


id: FYPO:0004678
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature, polyadenylated 25S rRNA measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased polyadenylated rRNA level","termid":"FYPO:0008091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"increased polyadenylated 25S rRNA level","synonyms":[{"name":"increased mature polyadenylated 25S rRNA transcript level","type":"exact"},{"name":"increased polyadenylated 25S rRNA accumulation","type":"related"},{"name":"increased polyadenylated 25S rRNA level during mitotic cell cycle","type":"related"},{"name":"increased polyadenylated 25S rRNA level during vegetative growth","type":"exact"},{"name":"increased polyadenylated 25S rRNA transcript level","type":"exact"}],"termid":"FYPO:0004678"}


id: PBO:0005135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-Not complex subunit Not2 (predicted)","termid":"PBO:0005135"}


id: PBO:0074153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member E2A (pseudogene)","termid":"PBO:0074153"}


id: PR:Q9Y815
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rsv2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y815"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein rsv2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1105.14","synonyms":[{"name":"Spom972h-rsv2","type":"exact"},{"name":"required for stationary phase viability protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y815"}


id: FYPO:0007623
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of mitochondrial respiratory chain complex III assembly is decreased.","definition_xrefs":["PomBase:mah","GO:0034551"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mitochondrial respiratory chain complex assembly","termid":"FYPO:0007122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased mitochondrial respiratory chain complex III assembly","synonyms":[{"name":"decreased mitochondrial respiratory chain complex III assembly during mitotic cell cycle","type":"related"},{"name":"decreased mitochondrial respiratory chain complex III assembly during vegetative growth","type":"exact"},{"name":"decreased respiratory chain complex III assembly","type":"exact"}],"termid":"FYPO:0007623"}


id: PBO:0055361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2790","termid":"PBO:0055361"}


id: PR:O74393
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC4F6.07c gene.","definition_xrefs":["UniProtKB:O74393","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase mak5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4F6.07c","synonyms":[{"name":"Spom972h-SPBC4F6.07c","type":"exact"}],"termid":"PR:O74393"}


id: GO:0001647
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with cytokinin and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.","definition_xrefs":["GOC:bf","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"},{"relation_name":"is_a","term_name":"cytokinin receptor activity","termid":"GO:0009884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"G protein-coupled cytokinin receptor activity","synonyms":[{"name":"G protein coupled cytokinin receptor activity","type":"exact"},{"name":"G-protein coupled cytokinin receptor activity","type":"exact"},{"name":"cytokinin receptor activity, G-protein coupled","type":"exact"}],"termid":"GO:0001647"}


id: PBO:0049126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor class C group 5 member C","termid":"PBO:0049126"}


id: PBO:0069121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 370, pseudogene","termid":"PBO:0069121"}


id: PBO:0048270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GALNT7 divergent transcript","termid":"PBO:0048270"}


id: GO:0009063
data:
  {"annotated_genes":["SJAG_04842","SJAG_03641","SJAG_02734","SJAG_03861","SJAG_00944","SJAG_03743","SJAG_03293","SJAG_02901","SJAG_03398","SJAG_04827","SJAG_02235","SJAG_02450","SJAG_00674","SJAG_04145","SJAG_00714","SJAG_03434","SJAG_00937","SJAG_02496","SJAG_03671","SJAG_00495","SJAG_01903"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72913,75619,73236],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000949"},{"annotations":[82115],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019478"},{"annotations":[80695],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036088"},{"annotations":[90236,89248],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009450"},{"annotations":[79794,98228,75916],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019464"},{"annotations":[70209],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042853"},{"annotations":[80147],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019544"},{"annotations":[115062,80145],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010121"},{"annotations":[72618],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006533"},{"annotations":[115795],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019450"},{"annotations":[93525,81367],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006538"},{"annotations":[71996,79870],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010133"},{"annotations":[73863],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006567"},{"annotations":[74829],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006574"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of amino acids, organic acids containing one or more amino substituents.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid metabolic process","termid":"GO:0006520"},{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00495":null,"SJAG_00674":null,"SJAG_00714":null,"SJAG_00937":null,"SJAG_00944":null,"SJAG_01903":null,"SJAG_02235":null,"SJAG_02450":null,"SJAG_02496":null,"SJAG_02734":null,"SJAG_02901":null,"SJAG_03293":null,"SJAG_03398":null,"SJAG_03434":null,"SJAG_03641":null,"SJAG_03671":null,"SJAG_03743":null,"SJAG_03861":null,"SJAG_04145":null,"SJAG_04827":null,"SJAG_04842":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0006520"],"is_obsolete":false,"name":"amino acid catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"amino acid breakdown","type":"exact"},{"name":"amino acid catabolism","type":"exact"},{"name":"amino acid degradation","type":"exact"},{"name":"cellular amino acid catabolic process","type":"exact"}],"termid":"GO:0009063","terms_by_termid":{"GO:0000949":null,"GO:0006533":null,"GO:0006538":null,"GO:0006567":null,"GO:0006574":null,"GO:0009450":null,"GO:0010121":null,"GO:0010133":null,"GO:0019450":null,"GO:0019464":null,"GO:0019478":null,"GO:0019544":null,"GO:0036088":null,"GO:0042853":null}}


id: PBO:0113016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bacterially-derived sulfatase; required for use of alkyl sulfates as sulfur source","termid":"PBO:0113016"}


id: FYPO:0001099
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing carbonyl cyanide m-chlorophenyl hydrazone (CCCP).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0000003","FYPO:0002058","FYPO:0000139","FYPO:0002057","FYPO:0000257"],"is_obsolete":false,"name":"normal growth on CCCP","synonyms":[{"name":"normal cell population growth in presence of CCCP","type":"exact"},{"name":"normal cell population growth on CCCP","type":"exact"},{"name":"normal cell population growth on carbonyl cyanide m-chlorophenyl hydrazone","type":"exact"},{"name":"normal cellular response to CCCP","type":"related"},{"name":"normal vegetative cell population growth on CCCP","type":"exact"}],"termid":"FYPO:0001099"}


id: PBO:0072883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SBF1 pseudogene 2","termid":"PBO:0072883"}


id: PBO:0120325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST18 antisense RNA 1","termid":"PBO:0120325"}


id: MONDO:0001803
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tympanic membrane disease that is characterized by blisters on the eardrum resulting from infection.","definition_xrefs":["DOID:13791"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tympanic membrane disorder","termid":"MONDO:0003648"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myringitis bullosa hemorrhagica","secondary_identifiers":["ICD10CM:H73.01","SCTID:33528003","MEDGEN:509977","UMLS:C0155461","ICD9:384.01"],"synonyms":[{"name":"bullous myringitis","type":"exact"}],"termid":"MONDO:0001803","xrefs":{"Monarch":{"xref_id":"0001803"}}}


id: PBO:0078707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon CAG) 1-2","termid":"PBO:0078707"}


id: MONDO:0011340
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"otorhinolaryngologic disease","termid":"MONDO:0024623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital tracheal stenosis","secondary_identifiers":["ICD9:748.3","MEDGEN:120556","NANDO:1201003","SCTID:9660004","icd11.foundation:2095672409","OMIM:603569","UMLS:C0265767","Orphanet:141127","GARD:12008","MESH:C566362"],"synonyms":[{"name":"tracheobronchial stenosis, congenital","type":"related"}],"termid":"MONDO:0011340","xrefs":{"Monarch":{"xref_id":"0011340"}}}


id: MONDO:0017588
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm involving a nail.","definition_xrefs":["MONDO:patterns/neoplasm"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare skin tumor or hamartoma (obsolete MONDO:0019300)","termid":"MONDO:0019300"},{"relation_name":"is_a","term_name":"nail disorder","termid":"MONDO:0002884"},{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nail tumor","secondary_identifiers":["GARD:21235","MEDGEN:867576","Orphanet:300515","UMLS:C4021961"],"synonyms":[{"name":"nail neoplasm","type":"exact"},{"name":"nail neoplasm (disease)","type":"exact"},{"name":"nail tumor","type":"exact"},{"name":"neoplasm of nail","type":"exact"},{"name":"rare nail tumor","type":"related"},{"name":"rare nail tumour","type":"related"},{"name":"tumor of nail","type":"exact"},{"name":"tumour of nail","type":"exact"}],"termid":"MONDO:0017588","xrefs":{"Monarch":{"xref_id":"0017588"}}}


id: PBO:0059401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S31 pseudogene 4","termid":"PBO:0059401"}


id: PBO:0119642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"REV3L antisense RNA 1","termid":"PBO:0119642"}


id: GO:0001863
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a collectin and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["ISBN:0781735149","GOC:signaling","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opsonin receptor activity","termid":"GO:0001847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"collectin receptor activity","termid":"GO:0001863"}


id: MONDO:0018660
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hemophilia is a genetic disorder characterized by spontaneous hemorrhage or prolonged bleeding due to factor VIII or IX deficiency.","definition_xrefs":["Orphanet:448"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare hemorrhagic disorder due to a constitutional coagulation factors defect (obsolete MONDO:0019039)","termid":"MONDO:0019039"},{"relation_name":"is_a","term_name":"coagulation protein disease","termid":"MONDO:0002242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"hemophilia","secondary_identifiers":["UMLS:C0684275","MEDGEN:146334","NCIT:C3093","SCTID:90935002","MedDRA:10061992","GARD:10418"],"synonyms":[{"name":"hemophilia","type":"exact"}],"termid":"MONDO:0018660","xrefs":{"Monarch":{"xref_id":"0018660"}}}


id: MOD:01408
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-threonine residue to form L-threonine thiazoline-4-carboxylic acid.","definition_xrefs":["RESID:AA0485","PubMed:11320328"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiazole/thiazoline ring crosslinked residues","termid":"MOD:01420"},{"relation_name":"is_a","term_name":"crosslinked L-threonine residue","termid":"MOD:02056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-threonine thiazoline-4-carboxylic acid","synonyms":[{"name":"(4S)-2-[(1S,2R)-1-amino-2-hydroxypropyl]-4,5-dihydro-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"2-[1-azanyl-2-hydroxypropyl]-4,5-dihydro-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK (4S)-thiazoline-4-carboxylic acid (Thr-Cys)","type":"exact"},{"name":"L-threonine (4S)-thiazoline-4-carboxylic acid","type":"exact"}],"termid":"MOD:01408"}


id: MONDO:0004085
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A epithelioid cell melanoma that involves the optic choroid.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant choroid melanoma","termid":"MONDO:0003878"},{"relation_name":"is_a","term_name":"epithelioid cell uveal melanoma","termid":"MONDO:0006200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004992"],"is_obsolete":false,"name":"choroid epithelioid cell melanoma","secondary_identifiers":["UMLS:C1333024","DOID:7041","MEDGEN:232360","NCIT:C6102"],"synonyms":[{"name":"choroid epithelioid cell melanoma","type":"exact"},{"name":"choroidal epithelioid cell melanoma","type":"exact"},{"name":"epithelioid cell melanoma of choroid","type":"exact"},{"name":"epithelioid cell melanoma of optic choroid","type":"exact"},{"name":"epithelioid cell melanoma of the choroid","type":"exact"},{"name":"optic choroid epithelioid cell melanoma","type":"exact"}],"termid":"MONDO:0004085","xrefs":{"Monarch":{"xref_id":"0004085"}}}


id: PBO:0083704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER integral membrane protein, ERMES complex subunit; ERMES links the ER to mitochondria and may promote inter-organellar calcium and phospholipid exchange as well as coordinating mitochondrial DNA replication and growth; required for mitophagy; ERMES complex is often co-localized with peroxisomes and with concentrated areas of pyruvate dehydrogenase","termid":"PBO:0083704"}


id: MONDO:0060671
data:
  {"annotated_genes":["SJAG_02712","SJAG_03557"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89124,89125],"is_not":false,"summary":null,"term":"MONDO:0060671"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02712":null,"SJAG_03557":null},"genotype_count":0,"is_obsolete":false,"name":"epilepsy, juvenile myoclonic, susceptibility to, 10","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4693613","MEDGEN:1647781","DOID:0111325","OMIM:617924"],"synonyms":[{"name":"EJM10","type":"related"},{"name":"epilepsy, juvenile myoclonic, susceptibility to, 10","type":"exact"}],"termid":"MONDO:0060671","terms_by_termid":{"MONDO:0060671":null},"xrefs":{"Monarch":{"xref_id":"0060671"}}}


id: PBO:0061257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"notch receptor 2","termid":"PBO:0061257"}


id: FYPO:0004119
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an inviable cell that is elongated, has more than one nucleus, has one or more septa with abnormal size, shape, or structure, and that undergoes two or more rounds of cell division, and then dies.","definition_xrefs":["PomBase:mah","PMID:15116432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions, elongated cell","termid":"FYPO:0002262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000005","FYPO:0001320","FYPO:0000004"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, elongated multinucleate cell with abnormal septum morphology","synonyms":[{"name":"inviable following spore germination, multiple cell divisions, elongated multinucleate cell with abnormal septum morphology","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, elongated multinucleate cell with abnormal septum formation","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, elongated multinucleate cell with abnormal septum morphology","type":"exact"}],"termid":"FYPO:0004119"}


id: PBO:0084889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial transcription elongation factor; DEAD-box protein; required for efficient splicing of mitochondrial Group I and II introns; non-polar RNA helicase that also facilities strand annealing; promotes RNA folding by stabilizing an early assembly intermediate","termid":"PBO:0084889"}


id: GO:1902622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of neutrophil migration.","definition_xrefs":["PMID:1826836","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte migration","termid":"GO:0002685"},{"relation_name":"regulates","term_name":"neutrophil migration","termid":"GO:1990266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neutrophil migration","termid":"GO:1902622"}


id: PR:P34208
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- chk1 gene.","definition_xrefs":["UniProtKB:P34208","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase chk1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1259.13","synonyms":[{"name":"Spom972h-chk1","type":"exact"},{"name":"checkpoint kinase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P34208"}


id: PR:Q9HDW3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tfb5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HDW3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II transcription factor B subunit 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32F12.15","synonyms":[{"name":"Spom972h-tfb5","type":"exact"},{"name":"TFIIH subunit 5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"general transcription and DNA repair factor IIH subunit 5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HDW3"}


id: GO:0016892
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of ester linkages within ribonucleic acids by creating internal breaks to yield 3'-phosphomonoesters.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA endonuclease activity","termid":"GO:0004521"},{"relation_name":"is_a","term_name":"hydrolase activity, acting on ester bonds","termid":"GO:0016788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0016788","GO:0140098","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"RNA endonuclease activity producing 3'-phosphomonoesters, hydrolytic mechanism","secondary_identifiers":["EC:3.1.27.-","Reactome:R-HSA-9755252","Reactome:R-HSA-9705961"],"synonyms":[{"name":"endoribonuclease activity, producing 3'-phosphomonoesters","type":"exact"},{"name":"endoribonuclease activity, producing other than 5'-phosphomonoesters","type":"exact"}],"termid":"GO:0016892"}


id: PBO:0064505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II, I and III subunit F","termid":"PBO:0064505"}


id: GO:0140894
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to an endolysosomal pattern recognition receptor (PRR) of the toll-like family. PRRs bind pathogen-associated molecular pattern (PAMPs), structures conserved among microbial species.","definition_xrefs":["PMID:29679565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0002753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"endolysosomal toll-like receptor signaling pathway","synonyms":[{"name":"endolysosomal pattern recognition receptor signaling pathway","type":"exact"}],"termid":"GO:0140894"}


id: PBO:0026686
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_proline_level","termid":"PBO:0026686"}


id: MONDO:0007252
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An extremely rare multiple congenital malformation syndrome characterized by congenital contractures of hand and feet with variable degrees of severity of camptodactyly, clubfoot and, less frequently, cleft palate. Intelligence is normal but in some cases, additional abnormalities, such as short stature, kyphoscoliosis, ptosis, micrognathia, and cryptorchidism may also be present. Gordon syndrome, Marden-Walker syndrome and arthrogryposis with oculomotor limitation and electroretinal anomalies clinically and genetically overlap, and could represent variable expressions of the same condition.","definition_xrefs":["Orphanet:376"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"distal arthrogryposis","termid":"MONDO:0019942"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gordon syndrome","secondary_identifiers":["DOID:0111607","ICD9:579.8","GARD:2553","MEDGEN:66314","MESH:C537288","NORD:1199","OMIM:114300","SCTID:237850008","UMLS:C0220666"],"synonyms":[{"name":"DA3","type":"related"},{"name":"Gordon syndrome","type":"exact"},{"name":"arthrogryposis distal type 3","type":"related"},{"name":"arthrogryposis multiplex congenita, distal, type 2A","type":"related"},{"name":"arthrogryposis, distal, type 3","type":"related"},{"name":"camptodactyly, cleft palate, and clubfoot","type":"related"},{"name":"camptodactyly-cleft palate-clubfoot syndrome","type":"exact"},{"name":"distal arthrogryposis type 3","type":"exact"},{"name":"distal arthrogryposis type IIA","type":"exact"}],"termid":"MONDO:0007252","xrefs":{"Monarch":{"xref_id":"0007252"}}}


id: GO:0110125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of myotube cell migration.","definition_xrefs":["GOC:ha","PMID:29122742"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell migration","termid":"GO:0030336"},{"relation_name":"is_a","term_name":"regulation of myotube cell migration","termid":"GO:0110123"},{"relation_name":"negatively_regulates","term_name":"myotube cell migration","termid":"GO:0110122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of myotube cell migration","termid":"GO:0110125"}


id: MONDO:0006229
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive, high-grade and poorly differentiated carcinoma with neuroendocrine differentiation that arises from the stomach. It is characterized by the presence of malignant small cells.","definition_xrefs":["NCIT:C6764"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small cell carcinoma","termid":"MONDO:0000402"},{"relation_name":"is_a","term_name":"gastric neuroendocrine neoplasm","termid":"MONDO:0003111"},{"relation_name":"is_a","term_name":"gastric carcinoma","termid":"MONDO:0004950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"gastric small cell neuroendocrine carcinoma","secondary_identifiers":["ONCOTREE:STSC","DOID:6552","MEDGEN:272664","UMLS:C1333788","EFO:1000277"],"synonyms":[{"name":"Oat cell carcinoma of stomach","type":"exact"},{"name":"Oat cell carcinoma of the stomach","type":"exact"},{"name":"STSC","type":"related"},{"name":"gastric Oat cell carcinoma","type":"exact"},{"name":"gastric small cell carcinoma","type":"exact"},{"name":"gastric small cell neuroendocrine carcinoma","type":"exact"},{"name":"small cell carcinoma of stomach","type":"exact"},{"name":"small cell carcinoma of the stomach","type":"exact"},{"name":"stomach small cell carcinoma","type":"exact"}],"termid":"MONDO:0006229","xrefs":{"Monarch":{"xref_id":"0006229"}}}


id: MONDO:0001865
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autoimmune polyendocrinopathy syndrome (obsolete MONDO:0001865)","termid":"MONDO:0001865","xrefs":{"Monarch":{"xref_id":"0001865"}}}


id: GO:0010199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which boundaries between lateral organs and the meristem is established and maintained.","definition_xrefs":["PMID:12068116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of plant organ boundary","termid":"GO:0090691"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"organ boundary specification between lateral organs and the meristem","termid":"GO:0010199"}


id: PBO:0075621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sprouty related EVH1 domain containing 2","termid":"PBO:0075621"}


id: PBO:0039261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase 7 family member A1 pseudogene 3","termid":"PBO:0039261"}


id: PR:Q9P6L5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- end4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P6L5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endocytosis protein end4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC688.11","synonyms":[{"name":"SLA2 protein homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-end4","type":"exact"}],"termid":"PR:Q9P6L5"}


id: PBO:0085787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unconfirmed function; similar to cell surface flocculin Flo11p; ORF exhibits genomic organization compatible with a translational readthrough-dependent mode of expression; in W303 strain one continuous open reading frame comprising of YDL037C, the intergenic region and YDL039C encodes the gene IMI1","termid":"PBO:0085787"}


id: FYPO:0007738
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the distribution of a protein localized to chromatin at the 3' ends of genes that can be transcribed by RNA polymerase II is normal (i.e. indistinguishable from wild type) during metaphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah","PMID:33771877"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin at 3' end of genes","termid":"FYPO:0007731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000138","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to chromatin at 3' end of RNA polymerase II-transcribed genes during mitotic metaphase","synonyms":[{"name":"normal condensin localization to chromatin at 3' end of RNA polymerase II-transcribed genes during mitotic metaphase","type":"broad"},{"name":"normal protein localisation to chromatin at 3' end of RNA polymerase II-transcribed genes during mitotic metaphase","type":"exact"},{"name":"normal protein localization to chromatin at 3' end of RNA polymerase II-transcribed genes during metaphase during vegetative growth","type":"exact"},{"name":"normal protein localization to chromatin at 3' end of RNA polymerase II-transcribed genes during metaphase of mitotic cell cycle","type":"exact"},{"name":"normal protein localization to chromatin downstream of RNA polymerase II-transcribed genes during mitotic metaphase","type":"exact"}],"termid":"FYPO:0007738"}


id: MONDO:0030941
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"erythrokeratodermia variabilis","termid":"MONDO:0017851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"erythrokeratodermia variabilis et progressiva 7","secondary_identifiers":["OMIM:619209","MEDGEN:1780408","UMLS:C5543106","GARD:18674"],"synonyms":[{"name":"EKVP7","type":"exact"},{"name":"erythrokeratodermia variabilis et progressiva 7","type":"exact"}],"termid":"MONDO:0030941","xrefs":{"Monarch":{"xref_id":"0030941"}}}


id: PBO:0000514
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae YKR079C","termid":"PBO:0000514"}


id: PBO:0071672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 4","termid":"PBO:0071672"}


id: PBO:0012048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sporulation specific PIL domain protein Meu14","termid":"PBO:0012048"}


id: GO:0001095
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a general RNA polymerase II transcription factor belonging to the TFIIE complex, one of the factors involved in formation of the preinitiation complex (PIC) by RNA polymerase II.","definition_xrefs":["GOC:krc","PMID:16858867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II general transcription initiation factor binding","termid":"GO:0001091"},{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"TFIIE-class transcription factor complex binding","synonyms":[{"name":"TFIIE-class transcription factor binding","type":"exact"}],"termid":"GO:0001095"}


id: GO:0019446
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of tyrosine into other compounds, including phosphoenolpyruvate.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete tyrosine catabolic process to phosphoenolpyruvate (obsolete GO:0019446)","synonyms":[{"name":"tyrosine breakdown to phosphoenolpyruvate","type":"exact"},{"name":"tyrosine degradation to phosphoenolpyruvate","type":"exact"}],"termid":"GO:0019446"}


id: PBO:0088972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S30","termid":"PBO:0088972"}


id: MONDO:0054736
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mosaic variegated aneuploidy syndrome","termid":"MONDO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mosaic variegated aneuploidy syndrome 3","secondary_identifiers":["OMIM:617598","UMLS:C4539839","GARD:16240","DOID:0080689","MEDGEN:1616382"],"synonyms":[{"name":"MOSAIC variegated aneuploidy syndrome 3","type":"related"},{"name":"MVA3","type":"related"}],"termid":"MONDO:0054736","xrefs":{"Monarch":{"xref_id":"0054736"}}}


id: SO:0001793
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A read from an end of the clone sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"read","termid":"SO:0000150"},{"relation_name":"part_of","term_name":"clone","termid":"SO:0000151"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clone_end","synonyms":[{"name":"clone end","type":"exact"}],"termid":"SO:0001793"}


id: FYPO:0000676
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transport phenotype observed in the vegetative growth phase of the life cycle in which protein targeting to the vacuole is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vacuolar transport during vegetative growth","termid":"FYPO:0000597"},{"relation_name":"is_a","term_name":"abnormal protein targeting during vegetative growth","termid":"FYPO:0000675"},{"relation_name":"is_a","term_name":"abnormal protein localization to vacuole","termid":"FYPO:0005490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein targeting to vacuole","synonyms":[{"name":"abnormal protein targeting to vacuole during mitotic cell cycle","type":"related"},{"name":"abnormal protein targeting to vacuole during vegetative growth","type":"exact"},{"name":"abnormal vacuolar protein sorting","type":"exact"}],"termid":"FYPO:0000676"}


id: PR:Q9Y7S8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dbl1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7S8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C2H8.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC2H8.05c","synonyms":[{"name":"Spom972h-dbl1","type":"exact"}],"termid":"PR:Q9Y7S8"}


id: GO:1990230
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex capable of catalyzing the transfer of an iron-sulfur (Fe-S) cluster from one compound (donor) to another (acceptor), which may be a target protein or another Fe-S assembly complex. In humans, it consists of HSPA9, HSCB, GLRX5, ABCB7 and GFER.","definition_xrefs":["GOC:bhm","PMID:19810706","PMID:34660592"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"iron-sulfur cluster transfer complex","synonyms":[{"name":"Fe-S cluster transfer complex","type":"exact"},{"name":"IscA complex","type":"narrow"},{"name":"SufA complex","type":"narrow"},{"name":"SufA dimer","type":"narrow"}],"termid":"GO:1990230"}


id: GO:0102207
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: docosanoate + O2 + reduced [NADPH--hemoprotein reductase] = 22-hydroxydocosanoate + H+ + H2O + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["GOC:krc","RHEA:40079","GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete docosanoate omega-hydroxylase activity (obsolete GO:0102207)","synonyms":[{"name":"behenate omega-hydroxylase activity","type":"exact"}],"termid":"GO:0102207"}


id: PBO:0051330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2-24","termid":"PBO:0051330"}


id: PBO:0053861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1134","termid":"PBO:0053861"}


id: PBO:0045344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"docking protein 4","termid":"PBO:0045344"}


id: PBO:0090309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"organic solute transmembrane transporter","termid":"PBO:0090309"}


id: PBO:0004871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S3 (predicted)","termid":"PBO:0004871"}


id: GO:1900927
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of L-threonine import into cell.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organic acid transport","termid":"GO:0032891"},{"relation_name":"is_a","term_name":"negative regulation of transmembrane transport","termid":"GO:0034763"},{"relation_name":"is_a","term_name":"negative regulation of amino acid transport","termid":"GO:0051956"},{"relation_name":"is_a","term_name":"regulation of L-threonine import across plasma membrane","termid":"GO:1900926"},{"relation_name":"negatively_regulates","term_name":"L-threonine import across plasma membrane","termid":"GO:1903807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"negative regulation of L-threonine import across plasma membrane","synonyms":[{"name":"down regulation of L-threonine import","type":"exact"},{"name":"down regulation of L-threonine uptake","type":"related"},{"name":"down-regulation of L-threonine import","type":"exact"},{"name":"down-regulation of L-threonine uptake","type":"related"},{"name":"downregulation of L-threonine import","type":"exact"},{"name":"downregulation of L-threonine uptake","type":"related"},{"name":"inhibition of L-threonine import","type":"narrow"},{"name":"inhibition of L-threonine uptake","type":"narrow"},{"name":"negative regulation of L-threonine uptake","type":"related"}],"termid":"GO:1900927"}


id: FYPO:0000660
data:
  {"alleles_by_uniquename":{"SJAG_01458:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01458","name":"acb1delta","uniquename":"SJAG_01458:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121468],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000719"}]},"cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate and other catalytic properties of a specified catalytic activity are normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity phenotype","termid":"FYPO:0000654"},{"relation_name":"is_a","term_name":"normal molecular function","termid":"FYPO:0000706"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01458":null},"genotype_count":1,"genotypes_by_uniquename":{"acb1delta":{"display_name":"acb1delta","display_uniquename":"acb1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01458:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257","FYPO:0000654"],"is_obsolete":false,"name":"normal catalytic activity","references_by_uniquename":{"PMID:31956022":null},"single_locus_annotated_genes":["SJAG_01458"],"single_locus_genotype_uniquenames":["acb1delta"],"termid":"FYPO:0000660","terms_by_termid":{"FYECO:0000126":null,"FYPO:0000719":null}}


id: MONDO:0016125
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete infectious, fungal or parasitic myopathy (obsolete MONDO:0016125)","secondary_identifiers":["Orphanet:206988"],"termid":"MONDO:0016125","xrefs":{"Monarch":{"xref_id":"0016125"}}}


id: MONDO:0018254
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"},{"relation_name":"is_a","term_name":"spondyloepimetaphyseal dysplasia","termid":"MONDO:0100510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondyloepimetaphyseal dysplasia, Isidor type","secondary_identifiers":["MEDGEN:1676518","UMLS:C5190629","GARD:21586","Orphanet:370015"],"termid":"MONDO:0018254","xrefs":{"Monarch":{"xref_id":"0018254"}}}


id: MONDO:0011881
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any striate palmoplantar keratoderma in which the cause of the disease is a mutation in the KRT1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striate palmoplantar keratoderma","termid":"MONDO:0018865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"keratosis palmoplantaris striata 3","secondary_identifiers":["GARD:9173","OMIM:607654","MEDGEN:418996","MESH:C536163","UMLS:C2931123","DOID:0081110"],"synonyms":[{"name":"KRT1 striate palmoplantar keratoderma","type":"exact"},{"name":"PPKS3","type":"related"},{"name":"keratoderma palmoplantar striate form 3","type":"related"},{"name":"keratoderma, palmoplantar, striate form 3","type":"related"},{"name":"keratosis palmoplantaris striata III","type":"related"},{"name":"keratosis palmoplantaris striata type 3","type":"exact"},{"name":"striate palmoplantar keratoderma 3","type":"related"},{"name":"striate palmoplantar keratoderma caused by mutation in KRT1","type":"exact"}],"termid":"MONDO:0011881","xrefs":{"Monarch":{"xref_id":"0011881"}}}


id: MONDO:0017436
data:
  {"annotated_genes":["SJAG_03847","SJAG_01863"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87970],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009670"},{"annotations":[87266],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012656"}]},"cv_name":"mondo","definition":"A syndrome characterized by congenital nonprogressive joint contractures. The contractures can involve the upper or lower limbs and/or the vertebral column, leading to various degrees of flexion or extension limitations evident at birth.","definition_xrefs":["PMID:22610851","DOID:0060558"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"arthrogryposis syndrome","termid":"MONDO:0015225"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01863":null,"SJAG_03847":null},"genotype_count":0,"is_obsolete":false,"name":"lethal congenital contracture syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:253310","icd11.foundation:1866017256","Orphanet:294965","UMLS:C5848326","MEDGEN:1863860","GARD:12643"],"synonyms":[{"name":"LCCS","type":"exact"}],"termid":"MONDO:0017436","terms_by_termid":{"MONDO:0009670":null,"MONDO:0012656":null},"xrefs":{"Monarch":{"xref_id":"0017436"}}}


id: PBO:0091857
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human PFDN5","termid":"PBO:0091857"}


id: PBO:0016950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Slt1","termid":"PBO:0016950"}


id: PBO:0081546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 462","termid":"PBO:0081546"}


id: GO:0102740
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: theobromine + S-adenosyl-L-methionine = H+ + caffeine + S-adenosyl-L-homocysteine.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete theobromine:S-adenosyl-L-methionine 1-N-methyltransferase activity (obsolete GO:0102740)","termid":"GO:0102740"}


id: PBO:0087246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine-rich protein that contains a bHLH DNA binding motif; binds E-boxes of glycolytic genes and contributes to their activation; may function as a transcriptional activator in Ty1-mediated gene expression; bHLH stands for basic-helix-loop-helix","termid":"PBO:0087246"}


id: FYPO:0004393
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosomes or sister chromatids do not move towards the spindle poles at the same time during meiosis I, but instead one or more chromosomes remain distant from the spindle pole after the bulk of the DNA has separated. Segregation may stop before completing separation of chromosomes, or may eventually be completed.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lagging meiotic chromosomes","termid":"FYPO:0002091"},{"relation_name":"is_a","term_name":"abnormal homologous chromosome segregation","termid":"FYPO:0004159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"lagging chromosomes during meiosis I","synonyms":[{"name":"lagging chromosomes during first meiotic nuclear division","type":"exact"}],"termid":"FYPO:0004393"}


id: GO:0034934
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: phenanthrene-4-carboxylate + 2 H+ + 2 e- + O2 = cis-3,4-phenanthrenedihydrodiol-4-carboxylate.","definition_xrefs":["UM-BBD_reactionID:r0939"],"gene_count":0,"genotype_count":0,"name":"obsolete phenanthrene-4-carboxylate dioxygenase activity (obsolete GO:0034934)","termid":"GO:0034934"}


id: PBO:0068685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 66, pseudogene","termid":"PBO:0068685"}


id: PBO:0089823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small RNA 2'-O-methyltransferase Hen1","termid":"PBO:0089823"}


id: FYPO:0000148
data:
  {"alleles_by_uniquename":{"SJAG_01330:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01330","name":"mad2delta","uniquename":"SJAG_01330:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121194,121289],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004318"}]},"cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype in which regulation of the mitotic cell cycle is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle","termid":"FYPO:0000059"},{"relation_name":"is_a","term_name":"regulation phenotype during vegetative growth","termid":"FYPO:0001334"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01330":null},"genotype_count":1,"genotypes_by_uniquename":{"mad2delta":{"display_name":"mad2delta","display_uniquename":"mad2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01330:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000631","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal regulation of mitotic cell cycle","references_by_uniquename":{"PMID:21802294":null,"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_01330"],"single_locus_genotype_uniquenames":["mad2delta"],"termid":"FYPO:0000148","terms_by_termid":{"FYECO:0000162":null,"FYPO:0004318":null}}


id: PATO:0015004
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A increase in the ability of a process to produce its output.","definition_xrefs":["PATOC:PortlandMeetingFeb2015"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"increased process quality","termid":"PATO:0002304"},{"relation_name":"is_a","term_name":"process efficacy","termid":"PATO:0015002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased efficacy","termid":"PATO:0015004"}


id: GO:0045023
data:
  {"annotated_genes":["SJAG_03689","SJAG_02621","SJAG_03356"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[119962,117844,101379],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0070317"}]},"cv_name":"biological_process","definition":"The mitotic cell cycle phase transition whose occurrence commits the cell from the G0 quiescent state to the G1 phase. Under certain conditions, cells exit the cell cycle during G1 and remain in the G0 state as nongrowing, non-dividing (quiescent) cells. Appropriate stimulation of such cells induces them to return to G1 and resume growth and division. The G0 to G1 transition is accompanied by many changes in the program of gene expression.","definition_xrefs":["ISBN:0716731363","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03356":null,"SJAG_03689":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"G0 to G1 transition","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0045023","terms_by_termid":{"GO:0070317":null}}


id: PR:P87303
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A general transcription factor IIH subunit 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13152:SF0","OMA:SCHPO03841","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II transcription factor B subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13G1.13","secondary_identifiers":["UniProtKB:P87303"],"synonyms":[{"name":"RNA polymerase II transcription factor B 52 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase II transcription factor B p52 subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-GTF2H4","type":"exact"}],"termid":"PR:P87303"}


id: PBO:0109830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"single-stranded telomeric binding protein Tcg1","termid":"PBO:0109830"}


id: PBO:0049211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate ionotropic receptor NMDA type subunit 3A","termid":"PBO:0049211"}


id: MONDO:0005407
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An eosinophilic esophagitis that starts in childhood.","definition_xrefs":["EFO:0004594"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eosinophilic esophagitis","termid":"MONDO:0005361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"childhood eosinophilic esophagitis","synonyms":[{"name":"eosinophilic esophagitis of childhood","type":"exact"},{"name":"paediatric eosinophilic esophagitis","type":"exact"},{"name":"pediatric eosinophilic esophagitis","type":"exact"}],"termid":"MONDO:0005407","xrefs":{"Monarch":{"xref_id":"0005407"}}}


id: PBO:0045615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 26 (pseudogene)","termid":"PBO:0045615"}


id: PR:O59698
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glycerol-3-phosphate transporter GlpT that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02606","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C36.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC36.01c","secondary_identifiers":["UniProtKB:O59698"],"synonyms":[{"name":"Spom972h-glpT","type":"exact"}],"termid":"PR:O59698"}


id: MONDO:0005878
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Onchocerciasis affecting the eye.","definition_xrefs":["NCIT:C34862"],"direct_ancestors":[{"relation_name":"is_a","term_name":"onchocerciasis","termid":"MONDO:0017137"},{"relation_name":"is_a","term_name":"parasitic eye infection","termid":"MONDO:0020947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"ocular onchocerciasis","secondary_identifiers":["SCTID:240842000","MEDGEN:45196","MESH:D015827","UMLS:C0029002","EFO:0007398"],"synonyms":[{"name":"eyeball of camera-type eye onchocerciasis","type":"exact"},{"name":"onchocerciasis of eyeball of camera-type eye","type":"exact"}],"termid":"MONDO:0005878","xrefs":{"Monarch":{"xref_id":"0005878"}}}


id: PBO:0038692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTB pseudogene 3","termid":"PBO:0038692"}


id: GO:0052906
data:
  {"annotated_genes":["SJAG_00255"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[68305],"is_not":false,"summary":null,"term":"GO:0052906"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + guanine(37) in tRNA = N(1)-methylguanine(37) in tRNA + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA (guanine) methyltransferase activity","termid":"GO:0016423"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00255":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"}],"interesting_parent_ids":["GO:0140098","GO:0003824","GO:0140101","GO:0016741","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"tRNA (guanine(37)-N1)-methyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["RHEA:36899","Reactome:R-HSA-6782859","MetaCyc:RXN-12458"],"synonyms":[{"name":"tRNA (guanine(37)-N(1))-methyltransferase activity","type":"exact"},{"name":"tRNA (guanosine(37)-N(1))-methyltransferase activity","type":"exact"},{"name":"tRNA (guanosine(37)-N1-)-methyltransferase activity","type":"exact"},{"name":"tRNA (m(1)G(37)) methyltransferase activity","type":"related"},{"name":"tRNA-(N(1)G37) methyltransferase activity","type":"related"},{"name":"transfer RNA (m(1)G(37)) methyltransferase activity","type":"related"}],"termid":"GO:0052906","terms_by_termid":{"GO:0052906":null}}


id: PBO:0089613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated HORMA domain protein Atg101","termid":"PBO:0089613"}


id: PBO:0058728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6856","termid":"PBO:0058728"}


id: PATO:0001739
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality that inheres in an bearer by virtue of how that bearer interacts with radiation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radiation quality","termid":"PATO:0001739"}


id: GO:0044644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant negative regulation of complement activation via the alternative pathway in the bitten/stung organism.","definition_xrefs":["GOC:fj","GOC:jl","PMID:20837040"],"gene_count":0,"genotype_count":0,"name":"obsolete envenomation resulting in negative regulation of complement activation, alternative pathway in another organism (obsolete GO:0044644)","synonyms":[{"name":"envenomation resulting in negative regulation of complement activation, alternative pathway in other organism","type":"exact"}],"termid":"GO:0044644"}


id: PBO:0071285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 8","termid":"PBO:0071285"}


id: PBO:0058419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4788","termid":"PBO:0058419"}


id: GO:0042547
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events resulting in chemical or structural changes to existing cell walls and contribute to multidimensional cell growth.","definition_xrefs":["GOC:jl","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall modification","termid":"GO:0042545"},{"relation_name":"part_of","term_name":"multidimensional cell growth","termid":"GO:0009825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0071554","GO:0008150"],"is_obsolete":false,"name":"cell wall modification involved in multidimensional cell growth","synonyms":[{"name":"cell wall modification during cell expansion","type":"exact"},{"name":"cell wall modification during multidimensional cell growth","type":"related"}],"termid":"GO:0042547"}


id: PBO:0113483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Telomere-linked gene, silencing of which is strictly Sir2-dependent","termid":"PBO:0113483"}


id: GO:1990981
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A regulation of protein localization to cell division site involved in cell separation after cytokinesis.","definition_xrefs":["PMID:25411334"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of protein localization to cell division site involved in cell separation after cytokinesis (obsolete GO:1990981)","termid":"GO:1990981"}


id: PBO:0070964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18 pseudogene 2","termid":"PBO:0070964"}


id: MONDO:0005064
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete infectious meningitis (obsolete MONDO:0005064)","termid":"MONDO:0005064","xrefs":{"Monarch":{"xref_id":"0005064"}}}


id: MONDO:0001765
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"polyneuropathy","termid":"MONDO:0001824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"polyneuropathy in collagen vascular disease","secondary_identifiers":["MEDGEN:509648","SCTID:193177003","UMLS:C0154759","ICD9:357.1","ICD9:357.4","DOID:13649"],"termid":"MONDO:0001765","xrefs":{"Monarch":{"xref_id":"0001765"}}}


id: GO:0036495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of translation initiation as a result of endoplasmic reticulum stress.","definition_xrefs":["GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translational initiation in response to stress","termid":"GO:0032057"},{"relation_name":"is_a","term_name":"regulation of translation initiation in response to endoplasmic reticulum stress","termid":"GO:0036491"},{"relation_name":"is_a","term_name":"negative regulation of translation in response to endoplasmic reticulum stress","termid":"GO:1902010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of translation initiation in response to endoplasmic reticulum stress","synonyms":[{"name":"negative regulation of translation initiation in response to ER stress","type":"related"}],"termid":"GO:0036495"}


id: GO:0035004
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + a phosphatidylinositol = ADP + a phosphatidylinositol 3-phosphate. This reaction is the addition of a phosphate group to phosphatidylinositol or one of its phosphorylated derivatives at the 3' position of the inositol ring.","definition_xrefs":["GOC:bf","PMID:10209156","PMID:9255069"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphatidylinositol 3-kinase activity (obsolete GO:0035004)","secondary_identifiers":["Wikipedia:Phosphoinositide_3-kinase"],"synonyms":[{"name":"phosphoinositide 3-kinase activity","type":"exact"}],"termid":"GO:0035004"}


id: GO:0015932
data:
  {"annotated_genes":["SJAG_01960","SJAG_00434","SJAG_04328","SJAG_01177","SJAG_00339","SJAG_00612","SJAG_03503","SJAG_04325","SJAG_02050","SJAG_00760","SJAG_03334","SJAG_00154","SJAG_03452","SJAG_04697","SJAG_04162"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103184],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046964"},{"annotations":[103185],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902557"},{"annotations":[59996],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008521"},{"annotations":[59186],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005471"},{"annotations":[104680],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140987"},{"annotations":[72235],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015228"},{"annotations":[75627],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015230"},{"annotations":[95153],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005457"},{"annotations":[73531],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005458"},{"annotations":[77211],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001409"},{"annotations":[77509],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051724"},{"annotations":[80938],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015218"},{"annotations":[76592,77735,90184],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005459"},{"annotations":[77736],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005460"},{"annotations":[79322],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005462"},{"annotations":[79323],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005464"}]},"cv_name":"molecular_function","definition":"Enables the transfer of nucleobases, nucleosides, nucleotides and nucleic acids from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00154":null,"SJAG_00339":null,"SJAG_00434":null,"SJAG_00612":null,"SJAG_00760":null,"SJAG_01177":null,"SJAG_01960":null,"SJAG_02050":null,"SJAG_03334":null,"SJAG_03452":null,"SJAG_03503":null,"SJAG_04162":null,"SJAG_04325":null,"SJAG_04328":null,"SJAG_04697":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"nucleobase-containing compound transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"nucleobase, nucleoside, nucleotide and nucleic acid transmembrane transporter activity","type":"related"}],"termid":"GO:0015932","terms_by_termid":{"GO:0001409":null,"GO:0005457":null,"GO:0005458":null,"GO:0005459":null,"GO:0005460":null,"GO:0005462":null,"GO:0005464":null,"GO:0005471":null,"GO:0008521":null,"GO:0015218":null,"GO:0015228":null,"GO:0015230":null,"GO:0046964":null,"GO:0051724":null,"GO:0140987":null,"GO:1902557":null}}


id: GO:0030314
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Complex formed in muscle cells between the membrane of the sarcoplasmic reticulum and invaginations of the plasma membrane (T-tubules).","definition_xrefs":["PMID:11535622"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"sarcoplasm","termid":"GO:0016528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"junctional membrane complex","synonyms":[{"name":"triad junction","type":"broad"}],"termid":"GO:0030314"}


id: MONDO:0000106
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete apnea (obsolete MONDO:0000106)","synonyms":[{"name":"apnea","type":"exact"},{"name":"obsolete apnea (disease)","type":"exact"}],"termid":"MONDO:0000106","xrefs":{"Monarch":{"xref_id":"0000106"}}}


id: GO:0062180
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: calcidiol + 2 H+ + O2 + 2 reduced [adrenodoxin] = (23S)-23,25-dihydroxycalciol + H2O + 2 oxidized [adrenodoxin].","definition_xrefs":["PMID:22100522","PMID:30205156","RHEA:46616"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin D 23-hydroxylase activity","termid":"GO:0062179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"25-hydroxycholecalciferol-23-hydroxylase activity","termid":"GO:0062180"}


id: GO:0006157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of deoxyadenosine, 2-deoxyribosyladenine, one of the four major nucleosides of DNA.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyadenosine metabolic process","termid":"GO:0046090"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside catabolic process","termid":"GO:0046124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"deoxyadenosine catabolic process","secondary_identifiers":["GO:0006159"],"synonyms":[{"name":"deoxyadenosine breakdown","type":"exact"},{"name":"deoxyadenosine catabolism","type":"exact"},{"name":"deoxyadenosine degradation","type":"exact"},{"name":"deoxyadenosine phosphorolysis","type":"related"}],"termid":"GO:0006157"}


id: MONDO:0005630
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease characterized by suppurative and granulomatous lesions in the respiratory tract, upper alimentary tract, skin, kidneys, joints, and other tissues. Actinobacillus lignieresii infects cattle and sheep while A. equuli infects horses and pigs.","definition_xrefs":["MESH:D000187"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cattle disease","termid":"MONDO:0024913"},{"relation_name":"is_a","term_name":"horse disease","termid":"MONDO:0024950"},{"relation_name":"is_a","term_name":"sheep disease","termid":"MONDO:0024985"},{"relation_name":"is_a","term_name":"swine disease","termid":"MONDO:0024990"},{"relation_name":"is_a","term_name":"Actinobacillus infectious disease, non-human animal","termid":"MONDO:0700059"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actinobacillosis","secondary_identifiers":["DOID:4974","SCTID:16140007"],"termid":"MONDO:0005630","xrefs":{"Monarch":{"xref_id":"0005630"}}}


id: PBO:0066967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 269","termid":"PBO:0066967"}


id: MONDO:1012620
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inherited disorder of neuromuscular transmission resulting in muscle weakness and fatigability exacerbated by exercise that occurs in dogs due to a mutation in the CHRNE gene.","definition_xrefs":["PMID:38853290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"myasthenia, dog","termid":"MONDO:1012175"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital myasthenic syndrome, CHRNE-related, dog","secondary_identifiers":["OMIA:000685-9615"],"termid":"MONDO:1012620","xrefs":{"Monarch":{"xref_id":"1012620"}}}


id: PBO:0081534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 444","termid":"PBO:0081534"}


id: MONDO:0005344
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A viral infection caused by the hepatitis B virus.","definition_xrefs":["NCIT:C3097"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"is_a","term_name":"Hepadnaviridae infectious disease","termid":"MONDO:0005786"},{"relation_name":"is_a","term_name":"viral hepatitis","termid":"MONDO:0006011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"hepatitis B virus infection","secondary_identifiers":["MESH:D006509","MEDGEN:6807","UMLS:C0019163","EFO:0004197","SCTID:66071002","ICD9:070.30","DOID:2043"],"synonyms":[{"name":"Hepatitis B","type":"exact"},{"name":"Hepatitis B infection","type":"exact"},{"name":"Hepatitis B virus caused hepatitis","type":"exact"},{"name":"Hepatitis B virus hepatitis","type":"exact"},{"name":"chronic hepatitis B","type":"narrow"},{"name":"hepatitis B infection","type":"exact"},{"name":"hepatitis type B","type":"exact"},{"name":"serum hepatitis","type":"related"},{"name":"viral Hepatitis B","type":"exact"}],"termid":"MONDO:0005344","xrefs":{"Monarch":{"xref_id":"0005344"}}}


id: GO:0018640
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dibenzothiophene + NADH + H+ + O2 = dibenzothiophene-5-oxide + NAD+ + H2O.","definition_xrefs":["RHEA:49076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"dibenzothiophene monooxygenase activity","secondary_identifiers":["UM-BBD_enzymeID:r0037","MetaCyc:RXN-621"],"termid":"GO:0018640"}


id: MONDO:0014517
data:
  {"annotated_genes":["SJAG_03536"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88517],"is_not":false,"summary":null,"term":"MONDO:0014517"}]},"cv_name":"mondo","definition":"Any generalized epilepsy with febrile seizures plus in which the cause of the disease is a mutation in the STX1B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"generalized epilepsy with febrile seizures plus","termid":"MONDO:0018214"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03536":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"generalized epilepsy with febrile seizures plus, type 9","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:863832","DOID:0111301","OMIM:616172","GARD:18668","UMLS:C4015395"],"synonyms":[{"name":"GEFSP9","type":"related"},{"name":"Gefs+, type 9","type":"related"},{"name":"STX1B generalised epilepsy with febrile seizures plus","type":"exact"},{"name":"STX1B generalized epilepsy with febrile seizures plus","type":"exact"},{"name":"STX1b generalised epilepsy with febrile seizures plus","type":"exact"},{"name":"STX1b generalized epilepsy with febrile seizures plus","type":"exact"},{"name":"generalised epilepsy with febrile seizures plus caused by mutation in STX1B","type":"exact"},{"name":"generalised epilepsy with febrile seizures plus caused by mutation in STX1b","type":"exact"},{"name":"generalized epilepsy with febrile seizures plus caused by mutation in STX1B","type":"exact"},{"name":"generalized epilepsy with febrile seizures plus caused by mutation in STX1b","type":"exact"},{"name":"generalized epilepsy with febrile seizures plus, type 9","type":"exact"}],"termid":"MONDO:0014517","terms_by_termid":{"MONDO:0014517":null},"xrefs":{"Monarch":{"xref_id":"0014517"}}}


id: PBO:0061734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoredoxin like 1","termid":"PBO:0061734"}


id: GO:0061355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of a Wnt protein from a cell.","definition_xrefs":["PMID:19223472","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein secretion","termid":"GO:0009306"},{"relation_name":"is_a","term_name":"signal release","termid":"GO:0023061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"Wnt protein secretion","termid":"GO:0061355"}


id: GO:0009712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a compound containing a pyrocatechol (1,2-benzenediol) nucleus or substituent.","definition_xrefs":["ISBN:0198547684","GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"catechol-containing compound metabolic process","synonyms":[{"name":"catechol metabolic process","type":"related"},{"name":"catechol metabolism","type":"related"}],"termid":"GO:0009712"}


id: PBO:0062306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily P member 3","termid":"PBO:0062306"}


id: GO:0031804
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 7 metabotropic glutamate receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled glutamate receptor binding","termid":"GO:0035256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"type 7 metabotropic glutamate receptor binding","synonyms":[{"name":"type 7 metabotropic glutamate receptor ligand","type":"narrow"}],"termid":"GO:0031804"}


id: PBO:0018162
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe SYntaxin-like protein","termid":"PBO:0018162"}


id: PATO:0002106
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular quality inhering in a bearer by virtue of its lacking most of the cellular characteristics which would allow it to be fully differentiated.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"differentiated","termid":"PATO:0002099"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poorly differentiated","termid":"PATO:0002106"}


id: GO:0051685
data:
  {"annotated_genes":["SJAG_03170","SJAG_04221","SJAG_00053","SJAG_01116"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59785,92222],"is_not":false,"summary":null,"term":"GO:0051685"},{"annotations":[108861,117064],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990854"}]},"cv_name":"biological_process","definition":"Any process in which the endoplasmic reticulum is maintained in a specific location within a cell and prevented from moving elsewhere.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum localization","termid":"GO:0051643"},{"relation_name":"is_a","term_name":"maintenance of organelle location","termid":"GO:0051657"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_01116":null,"SJAG_03170":null,"SJAG_04221":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"maintenance of ER location","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"maintenance of ER localization","type":"related"},{"name":"maintenance of endoplasmic reticulum localization","type":"exact"}],"termid":"GO:0051685","terms_by_termid":{"GO:0051685":null,"GO:1990854":null}}


id: GO:0031489
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a class V myosin; myosin V is a dimeric molecule involved in intracellular transport.","definition_xrefs":["GOC:mah","PMID:11212351","PMID:33541831"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin binding","termid":"GO:0017022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0008092"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674","GO:0008092"],"is_obsolete":false,"name":"myosin V binding","termid":"GO:0031489"}


id: PBO:0038348
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-active_ingredient_in'","termid":"PBO:0038348"}


id: GO:0061106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of the differentiation of a neuroendocrine cell in the stomach.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inhibition of neuroepithelial cell differentiation","termid":"GO:0002085"},{"relation_name":"is_a","term_name":"negative regulation of neuron differentiation","termid":"GO:0045665"},{"relation_name":"is_a","term_name":"regulation of stomach neuroendocrine cell differentiation","termid":"GO:0061105"},{"relation_name":"negatively_regulates","term_name":"stomach neuroendocrine cell differentiation","termid":"GO:0061102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of stomach neuroendocrine cell differentiation","termid":"GO:0061106"}


id: PBO:0089197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase Sdh1","termid":"PBO:0089197"}


id: MONDO:0957874
data:
  {"annotated_genes":["SJAG_00459"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88118],"is_not":false,"summary":null,"term":"MONDO:0957874"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neuronopathy, distal hereditary motor, autosomal recessive","termid":"MONDO:0015363"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0006025","MONDO:0005559"],"is_obsolete":false,"name":"neuronopathy, distal hereditary motor, autosomal recessive 9","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0081428","UMLS:C5882672","OMIM:620402","MEDGEN:1850177"],"termid":"MONDO:0957874","terms_by_termid":{"MONDO:0957874":null},"xrefs":{"Monarch":{"xref_id":"0957874"}}}


id: MONDO:0032877
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with nonspecific brain abnormalities and with or without seizures","secondary_identifiers":["MEDGEN:1684757","UMLS:C5231470","OMIM:618709"],"synonyms":[{"name":"NEDBAS","type":"related"},{"name":"NEURODEVELOPMENTAL DISORDER WITH NONSPECIFIC BRAIN ABNORMALITIES AND WITH OR WITHOUT SEIZURES","type":"related"},{"name":"neurodevelopmental disorder with nonspecific brain abnormalities and with or without seizures","type":"exact"}],"termid":"MONDO:0032877","xrefs":{"Monarch":{"xref_id":"0032877"}}}


id: FYPO:0001249
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which the probability that a DNA replication will initiate at a particular replication origin is higher than in wild type. In cells with increased origin firing efficiency, genomic DNA replication initiates from more origins than wild type, and is completed in more, smaller segments, than wild type.","definition_xrefs":["PMID:18799612","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of mitotic DNA replication initiation","termid":"FYPO:0001248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"increased origin firing efficiency","synonyms":[{"name":"increased origin firing efficiency during mitotic cell cycle","type":"related"},{"name":"increased origin firing efficiency during vegetative growth","type":"exact"}],"termid":"FYPO:0001249"}


id: PBO:0049715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAUS augmin like complex subunit 1 pseudogene 3","termid":"PBO:0049715"}


id: GO:0070200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a protein to a specific location in the telomeric region of a chromosome.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of protein localization to chromosome","termid":"GO:0070199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"establishment of protein localization to telomere","synonyms":[{"name":"establishment of protein localisation to telomere","type":"exact"},{"name":"establishment of protein localization to chromosome, telomeric region","type":"exact"}],"termid":"GO:0070200"}


id: PBO:0031784
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cytokinesis","termid":"PBO:0031784"}


id: MONDO:1012781
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any paroxysmal dyskinesia that occurs in dogs due to a mutation in the PIGN gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paroxysmal dyskinesia, dog","termid":"MONDO:1010422"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paroxysmal dyskinesia, PIGN-related, dog","secondary_identifiers":["OMIA:002084-9615"],"termid":"MONDO:1012781","xrefs":{"Monarch":{"xref_id":"1012781"}}}


id: PBO:0004139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex subunit Sus1","termid":"PBO:0004139"}


id: GO:0048895
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a glial cell in a lateral line nerve.","definition_xrefs":["PMID:12062041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell differentiation","termid":"GO:0010001"},{"relation_name":"part_of","term_name":"lateral line nerve development","termid":"GO:0048892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral line nerve glial cell differentiation","termid":"GO:0048895"}


id: PBO:0039067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"agmatinase","termid":"PBO:0039067"}


id: PBO:0038650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACOXL antisense RNA 1","termid":"PBO:0038650"}


id: MONDO:0014766
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukodystrophy and acquired microcephaly with or without dystonia;","secondary_identifiers":["UMLS:C4225213","MEDGEN:908888","OMIM:616763"],"synonyms":[{"name":"LDAMD","type":"related"},{"name":"leukodystrophy and acquired microcephaly with or without dystonia","type":"related"}],"termid":"MONDO:0014766","xrefs":{"Monarch":{"xref_id":"0014766"}}}


id: PBO:0075021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-32","termid":"PBO:0075021"}


id: MONDO:0858999
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KDM3B-related intellectual disability-facial dysmorphism-short stature syndrome","secondary_identifiers":["Orphanet:633004"],"termid":"MONDO:0858999","xrefs":{"Monarch":{"xref_id":"0858999"}}}


id: PBO:0028141
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sulfide_absent_from_cell","termid":"PBO:0028141"}


id: PBO:0030440
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_tRNA_modification","termid":"PBO:0030440"}


id: PBO:0060288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin light chain 5","termid":"PBO:0060288"}


id: PBO:0043451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calponin 2 pseudogene 12","termid":"PBO:0043451"}


id: PBO:0042146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 4 like 2","termid":"PBO:0042146"}


id: GO:0008822
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete crotonobetaine/carnitine-CoA ligase activity (obsolete GO:0008822)","synonyms":[{"name":"crotonobetaine/carnitine-CoA ligase activity","type":"exact"}],"termid":"GO:0008822"}


id: GO:0018229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of a C-terminal peptidyl-cysteine to form peptidyl-L-cysteine methyl ester.","definition_xrefs":["RESID:AA0105"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-L-cysteine methyl ester biosynthetic process from peptidyl-cysteine (obsolete GO:0018229)","synonyms":[{"name":"peptidyl-L-cysteine methyl ester anabolism from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-L-cysteine methyl ester formation from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-L-cysteine methyl ester synthesis from peptidyl-cysteine","type":"exact"}],"termid":"GO:0018229"}


id: PBO:0080604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 38","termid":"PBO:0080604"}


id: GO:0019328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of gallate, the anion of gallic acid, in the absence of oxygen.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gallate catabolic process","termid":"GO:0019396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"anaerobic gallate catabolic process","secondary_identifiers":["MetaCyc:P3-PWY"],"synonyms":[{"name":"anaerobic gallate breakdown","type":"exact"},{"name":"anaerobic gallate catabolism","type":"exact"},{"name":"anaerobic gallate degradation","type":"exact"},{"name":"anaerobic gallic acid catabolic process","type":"exact"},{"name":"anaerobic gallic acid catabolism","type":"exact"},{"name":"gallate fermentation","type":"exact"}],"termid":"GO:0019328"}


id: MONDO:0004943
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant soft tissue neoplasm that arises from the structures of the orbit. The majority of the cases are rhabdomyosarcomas.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orbital cancer","termid":"MONDO:0002889"},{"relation_name":"is_a","term_name":"sarcoma","termid":"MONDO:0005089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"orbit sarcoma","secondary_identifiers":["DOID:9987","UMLS:C1335131","MEDGEN:277449","NCIT:C6095","SCTID:699354006"],"synonyms":[{"name":"orbit of skull sarcoma","type":"exact"},{"name":"orbital sarcoma","type":"exact"},{"name":"sarcoma of orbit","type":"exact"},{"name":"sarcoma of orbit of skull","type":"exact"},{"name":"sarcoma of the orbit","type":"exact"}],"termid":"MONDO:0004943","xrefs":{"Monarch":{"xref_id":"0004943"}}}


id: GO:0140772
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl-[protein] + hexadecanoyl-CoA = CoA + H+ + N(6)-hexadecanoyl-L-lysyl-[protein].","definition_xrefs":["PMID:30061757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-lysine N6-palmitoyltransferase activity","termid":"GO:0018031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0016740","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"CoA-dependent peptidyl-lysine N6-palmitoyltransferase activity","termid":"GO:0140772"}


id: GO:0071284
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lead ion stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lead ion","termid":"GO:0010288"},{"relation_name":"is_a","term_name":"cellular response to metal ion","termid":"GO:0071248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to lead ion","termid":"GO:0071284"}


id: PBO:0059262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L28","termid":"PBO:0059262"}


id: MONDO:0002893
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete chondroid chordoma (obsolete MONDO:0002893)","termid":"MONDO:0002893","xrefs":{"Monarch":{"xref_id":"0002893"}}}


id: PBO:0039918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGEF17 antisense RNA 1","termid":"PBO:0039918"}


id: PBO:0089720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (m1A) methyltransferase non-catalytic subunit Gcd10","termid":"PBO:0089720"}


id: PBO:0085656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in mitochondrion organization; functions with Nca2p to regulate mitochondrial expression of subunits 6 (Atp6p) and 8 (Atp8p) of the Fo-F1 ATP synthase; SWAT-GFP, seamless-GFP and mCherry fusion proteins localize to the vacuole; member of the SUN family; expression induced in cells treated with the mycotoxin patulin; NCA3 has a paralog, UTH1, that arose from the whole genome duplication","termid":"PBO:0085656"}


id: GO:0033851
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 dimethylallyl diphosphate = diphosphate + lavandulyl diphosphate.","definition_xrefs":["RHEA:21676","EC:2.5.1.69"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016765","GO:0016740"],"is_obsolete":false,"name":"lavandulyl diphosphate synthase activity","secondary_identifiers":["MetaCyc:2.5.1.69-RXN","KEGG_REACTION:R08950"],"synonyms":[{"name":"FDS-5","type":"related"},{"name":"dimethylallyl-diphosphate:dimethylallyl-diphosphate dimethylallyltransferase (lavandulyl-diphosphate-forming) activity","type":"related"}],"termid":"GO:0033851"}


id: PBO:0117084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU2F3 antisense RNA 1","termid":"PBO:0117084"}


id: MONDO:0013819
data:
  {"annotated_genes":["SJAG_02254"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88070],"is_not":false,"summary":null,"term":"MONDO:0013819"}]},"cv_name":"mondo","definition":"Any Coffin-Siris syndrome in which the cause of the disease is a mutation in the ARID1A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"Coffin-Siris syndrome","termid":"MONDO:0015452"},{"relation_name":"is_a","term_name":"BAFopathy","termid":"MONDO:0700120"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02254":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual disability, autosomal dominant 14","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3553247","MEDGEN:766161","OMIM:614607","DOID:0070044","GARD:15820"],"synonyms":[{"name":"ARID1A Coffin-Siris syndrome","type":"exact"},{"name":"ARID1A-related BAFopathy","type":"exact"},{"name":"COFFIN-SIRIS syndrome 2","type":"related"},{"name":"CSS2","type":"exact"},{"name":"Coffin-Siris syndrome 2","type":"related"},{"name":"Coffin-Siris syndrome caused by mutation in ARID1A","type":"exact"},{"name":"MRD14","type":"exact"},{"name":"autosomal dominant intellectual disability 14","type":"exact"},{"name":"autosomal dominant mental retardation 14","type":"exact"},{"name":"intellectual disability, autosomal dominant 14","type":"exact"},{"name":"intellectual disability, autosomal dominant type 14","type":"exact"},{"name":"mental retardation, autosomal dominant 14","type":"related"},{"name":"mental retardation, autosomal dominant type 14","type":"exact"}],"termid":"MONDO:0013819","terms_by_termid":{"MONDO:0013819":null},"xrefs":{"Monarch":{"xref_id":"0013819"}}}


id: MONDO:0019788
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Non-functioning paraganglioma is a rare neuroendocrine tumor arising from neural crest-derived paraganglion cells (most often in the para-aortic region at the level of renal hilia, organ of Zuckerkandl, thoracic paraspinal region, bladder, and carotid body) not associated with catecholamine secretion. These tumors are usually clinically silent and symptoms, if present, are nonspecific and depend on the location of the tumor. Association with certain hereditary cancer-predisposing syndromes, such as multiple endocrine neoplasia, neurofibromatosis type 1 or von Hippel Lindau syndrome, may be observed.","definition_xrefs":["Orphanet:94080"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paraganglioma","termid":"MONDO:0000448"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-secreting paraganglioma","secondary_identifiers":["MEDGEN:1634671","GARD:19248","SCTID:764999002","UMLS:C4707263"],"synonyms":[{"name":"non-functioning paraganglioma","type":"related"}],"termid":"MONDO:0019788","xrefs":{"Monarch":{"xref_id":"0019788"}}}


id: GO:0000313
data:
  {"annotated_genes":["SJAG_02777","SJAG_01463","SJAG_03040","SJAG_00844","SJAG_04244","SJAG_01719","SJAG_03192","SJAG_01473","SJAG_01727","SJAG_00513","SJAG_02643","SJAG_04753","SJAG_01303","SJAG_00889","SJAG_03053","SJAG_00105","SJAG_04173","SJAG_02836","SJAG_03284","SJAG_01468","SJAG_04918","SJAG_02359","SJAG_04281","SJAG_00799","SJAG_01478","SJAG_03459","SJAG_00860","SJAG_04893","SJAG_04889","SJAG_00148","SJAG_02067","SJAG_04788","SJAG_05573","SJAG_01630","SJAG_01413","SJAG_04378","SJAG_06253","SJAG_03636","SJAG_03584","SJAG_01045","SJAG_04164","SJAG_02762","SJAG_01734","SJAG_00077","SJAG_03065","SJAG_04019","SJAG_05320","SJAG_03176","SJAG_00060","SJAG_01829","SJAG_03402","SJAG_05218","SJAG_02452","SJAG_02324","SJAG_01520","SJAG_01591","SJAG_03297","SJAG_02201","SJAG_05244","SJAG_06110","SJAG_00315","SJAG_04689","SJAG_07009","SJAG_02071","SJAG_04490","SJAG_05270","SJAG_04216","SJAG_00944","SJAG_04493","SJAG_04207","SJAG_00628","SJAG_01767","SJAG_00086","SJAG_03649","SJAG_00782","SJAG_04494","SJAG_00497"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[73557,119781,79864,77355,112955,116570,116452,74542,80992,80175,81152,81469,78359,76560,73885,77128,99795,107534,109918,110017,114080,72504,114581,81602,98410,79632,71366,74208,68362,79892,99774,78388,108590,105503,112626,111688,74803,82179,115307,72944,110067,118014,118123,79039],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005762"},{"annotations":[74105,105824,75855,112514,117454,111980,91772,104132,109922,104903,112232,99798,70895,99799,96001,110426,117874,80093,75903,107865,74969,119949,78298,108230,74337,77468,96303,91746,98442,110182,114216,97741,93895],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005763"}]},"cv_name":"cellular_component","definition":"A ribosome contained within a subcellular membrane-bounded organelle.","definition_xrefs":["GOC:mcc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribosome","termid":"GO:0005840"},{"relation_name":"part_of","term_name":"organelle","termid":"GO:0043226"}],"gene_count":77,"genes_by_uniquename":{"SJAG_00060":null,"SJAG_00077":null,"SJAG_00086":null,"SJAG_00105":null,"SJAG_00148":null,"SJAG_00315":null,"SJAG_00497":null,"SJAG_00513":null,"SJAG_00628":null,"SJAG_00782":null,"SJAG_00799":null,"SJAG_00844":null,"SJAG_00860":null,"SJAG_00889":null,"SJAG_00944":null,"SJAG_01045":null,"SJAG_01303":null,"SJAG_01413":null,"SJAG_01463":null,"SJAG_01468":null,"SJAG_01473":null,"SJAG_01478":null,"SJAG_01520":null,"SJAG_01591":null,"SJAG_01630":null,"SJAG_01719":null,"SJAG_01727":null,"SJAG_01734":null,"SJAG_01767":null,"SJAG_01829":null,"SJAG_02067":null,"SJAG_02071":null,"SJAG_02201":null,"SJAG_02324":null,"SJAG_02359":null,"SJAG_02452":null,"SJAG_02643":null,"SJAG_02762":null,"SJAG_02777":null,"SJAG_02836":null,"SJAG_03040":null,"SJAG_03053":null,"SJAG_03065":null,"SJAG_03176":null,"SJAG_03192":null,"SJAG_03284":null,"SJAG_03297":null,"SJAG_03402":null,"SJAG_03459":null,"SJAG_03584":null,"SJAG_03636":null,"SJAG_03649":null,"SJAG_04019":null,"SJAG_04164":null,"SJAG_04173":null,"SJAG_04207":null,"SJAG_04216":null,"SJAG_04244":null,"SJAG_04281":null,"SJAG_04378":null,"SJAG_04490":null,"SJAG_04493":null,"SJAG_04494":null,"SJAG_04689":null,"SJAG_04753":null,"SJAG_04788":null,"SJAG_04889":null,"SJAG_04893":null,"SJAG_04918":null,"SJAG_05218":null,"SJAG_05244":null,"SJAG_05270":null,"SJAG_05320":null,"SJAG_05573":null,"SJAG_06110":null,"SJAG_06253":null,"SJAG_07009":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"organellar ribosome","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0000313","terms_by_termid":{"GO:0005762":null,"GO:0005763":null}}


id: PBO:0064259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain containing A7","termid":"PBO:0064259"}


id: RO:0002634
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"parasite_of","termid":"RO:0002444"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoparasite_of","synonyms":[{"name":"lives inside of","type":"related"}],"termid":"RO:0002634"}


id: PBO:0082697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the kinetochore sub-complex COMA; COMA (Ctf19p, Okp1p, Mcm21p, Ame1p) bridges kinetochore subunits in contact with centromeric DNA with subunits bound to microtubules during kinetochore assembly; involved in minichromosome maintenance; modified by sumoylation; orthologous to human centromere constitutive-associated network (CCAN) subunit CENP-O and fission yeast mal2","termid":"PBO:0082697"}


id: GO:0019150
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + D-ribulose = ADP + D-ribulose 5-phosphate.","definition_xrefs":["EC:2.7.1.47"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"carbohydrate kinase activity","termid":"GO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"D-ribulokinase activity","secondary_identifiers":["RHEA:17601","MetaCyc:D-RIBULOKIN-RXN"],"synonyms":[{"name":"ATP:D-ribulose 5-phosphotransferase activity","type":"related"},{"name":"D-ribulokinase (phosphorylating)","type":"related"}],"termid":"GO:0019150"}


id: PBO:0040125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and SOCS box containing 11","termid":"PBO:0040125"}


id: MONDO:0011318
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tonoki syndrome","secondary_identifiers":["UMLS:C1863918","MESH:C536967","MEDGEN:355094","OMIM:603396"],"synonyms":[{"name":"Tonoki syndrome","type":"exact"},{"name":"short stature, brachydactyly, nail dysplasia and intellectual disability","type":"related"},{"name":"short stature, brachydactyly, nail dysplasia and mental retardation","type":"related"}],"termid":"MONDO:0011318","xrefs":{"Monarch":{"xref_id":"0011318"}}}


id: PBO:0050161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 17","termid":"PBO:0050161"}


id: GO:0016524
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with alpha-latrotoxin, a potent presynaptic neurotoxin, and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:jl","PMID:10025961","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"latrotoxin receptor activity","synonyms":[{"name":"latrophilin","type":"narrow"}],"termid":"GO:0016524"}


id: PBO:0089863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid elongase Elo1","termid":"PBO:0089863"}


id: FYPO:0007585
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which septation initiation network signaling begins earlier than normal. Signaling may begin in interphase of the mitotic cell cycle.","definition_xrefs":["PMID:19736319","PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septation initiation network signaling","termid":"FYPO:0007569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000298"],"is_obsolete":false,"name":"premature septation initiation network signaling","synonyms":[{"name":"advanced septation initiation network signaling","type":"exact"},{"name":"premature SIN signaling","type":"exact"},{"name":"premature septation initiation network signaling during mitotic cell cycle","type":"related"},{"name":"premature septation initiation network signaling during vegetative growth","type":"exact"},{"name":"premature septation initiation network signalling","type":"exact"},{"name":"premature septation initiation signaling","type":"exact"}],"termid":"FYPO:0007585"}


id: GO:0039690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A viral genome replication process where the template genome is positive stranded, single stranded RNA ((+)ssRNA). Replication of the positive strand leads to dsRNA formation, which in turn is transcribed into positive single stranded RNA.","definition_xrefs":["VZ:1116","GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral RNA genome replication","termid":"GO:0039694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive stranded viral RNA replication","synonyms":[{"name":"ss(+) viral RNA replication","type":"related"}],"termid":"GO:0039690"}


id: MONDO:0009262
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"GM1 gangliosidosis type 3 is a mild, chronic, adult form of GM1 gangliosidosis characterized by onset generally during childhood or adolescence and by cerebellar dysfunction.","definition_xrefs":["Orphanet:79257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GM1 gangliosidosis","termid":"MONDO:0018149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0002561"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005328","MONDO:0002525","MONDO:0002561"],"is_obsolete":false,"name":"GM1 gangliosidosis type 3","secondary_identifiers":["NANDO:1200069","SCTID:238027003","DOID:0080489","GARD:2431","MEDGEN:78655","NANDO:2201198","OMIM:230650","UMLS:C0268273","icd11.foundation:1331496842"],"synonyms":[{"name":"Beta-galactosidase deficiency type 3","type":"related"},{"name":"GM1-gangliosidosis, type 3","type":"related"},{"name":"GM1-gangliosidosis, type III","type":"related"},{"name":"adult GM1 gangliosidosis","type":"related"},{"name":"adult-onset GM1 gangliosidosis","type":"exact"},{"name":"gangliosidosis GM1 type 3","type":"related"},{"name":"gangliosidosis generalised GM1 chronic type","type":"related"},{"name":"gangliosidosis generalized GM1 chronic type","type":"related"},{"name":"gangliosidosis, generalised GM1, adult type","type":"related"},{"name":"gangliosidosis, generalised GM1, chronic type","type":"related"},{"name":"gangliosidosis, generalised GM1, type 3","type":"related"},{"name":"gangliosidosis, generalized GM1, adult type","type":"related"},{"name":"gangliosidosis, generalized GM1, chronic type","type":"related"},{"name":"gangliosidosis, generalized GM1, type 3","type":"related"}],"termid":"MONDO:0009262","xrefs":{"Monarch":{"xref_id":"0009262"}}}


id: PBO:0084721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial inner membrane protein; exposed to the mitochondrial matrix; associates with mitochondrial ribosomes; NOT required for respiratory growth; homolog of human Letm1, a protein implicated in Wolf-Hirschhorn syndrome","termid":"PBO:0084721"}


id: PBO:0082383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta 3 subunit of the 20S proteasome; involved in ubiquitin-dependent catabolism; human homolog is subunit C10","termid":"PBO:0082383"}


id: PBO:0016071
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe mPR1","termid":"PBO:0016071"}


id: MONDO:0016727
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Extraventricular neurocytoma (EVN), a variant of central neurocytoma, is a rare neuronal neoplasm, composed of round cells with neuronal differentiation, which is located outside of the ventricular system, usually within the spinal cord or cerebral hemispheres and that manifests with headache, nausea, vomiting, complex partial seizures or focal neurological deficits. In some cases it may exhibit atypical features consistent with aggressive clinical behavior.","definition_xrefs":["Orphanet:251927"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mixed neuronal-glial tumor","termid":"MONDO:0016729"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extraventricular neurocytoma","secondary_identifiers":["GARD:20727","DOID:0081314","SCTID:716787002","MEDGEN:457401","NCIT:C92555","ICDO:9506/1","ONCOTREE:EVN","UMLS:C2985175"],"synonyms":[{"name":"EVN","type":"exact"},{"name":"extraventricular neurocytoma (WHO grade II)","type":"exact"}],"termid":"MONDO:0016727","xrefs":{"Monarch":{"xref_id":"0016727"}}}


id: GO:0039718
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cytoplasmic viral factory that consists of a double-membrane bound vesicle. Has a diameter of 200-300nm and is derived from the endoplasmic reticulum or Golgi apparatus. Produced by Picornaviridae, Nidovirales, Arteriviridae and Coronaviridae.","definition_xrefs":["PMID:22440839","VZ:1951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic viral factory","termid":"GO:0039714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"double membrane vesicle viral factory","synonyms":[{"name":"DMV viral factory","type":"exact"}],"termid":"GO:0039718"}


id: GO:0021513
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that regulates the coordinated growth and differentiation that establishes the non-random dorsal-ventral spatial arrangement of the spinal cord.","definition_xrefs":["GOC:dph","GO_REF:0000021","GOC:dgh","GOC:cls","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dorsal/ventral pattern formation","termid":"GO:0009953"},{"relation_name":"part_of","term_name":"spinal cord patterning","termid":"GO:0021511"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spinal cord dorsal/ventral patterning","synonyms":[{"name":"spinal cord dorsal-ventral patterning","type":"exact"},{"name":"spinal cord dorsoventral patterning","type":"exact"}],"termid":"GO:0021513"}


id: GO:2001019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of retrograde axon cargo transport.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intracellular transport","termid":"GO:0032388"},{"relation_name":"is_a","term_name":"regulation of retrograde axon cargo transport","termid":"GO:2001017"},{"relation_name":"positively_regulates","term_name":"retrograde axonal transport","termid":"GO:0008090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of retrograde axon cargo transport","synonyms":[{"name":"positive regulation of retrograde axonal transport","type":"exact"}],"termid":"GO:2001019"}


id: PBO:0090841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L16","termid":"PBO:0090841"}


id: PBO:0049307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase omega 2","termid":"PBO:0049307"}


id: GO:0030369
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with ICAM-3, intercellular adhesion molecule 3, and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity. ICAM-3, or CD50, are constitutively expressed on monocytes, granulocytes and lymphocytes; on physiological stimulation, they become transiently phosphorylated on serine residues.","definition_xrefs":["PMID:7515813","GOC:signaling","ISBN:0198506732","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"ICAM-3 receptor activity","termid":"GO:0030369"}


id: PBO:0071308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 31","termid":"PBO:0071308"}


id: GO:0033345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-asparagine, via the intermediate L-aspartate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-asparagine catabolic process","termid":"GO:0006530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"L-asparagine catabolic process via L-aspartate","secondary_identifiers":["MetaCyc:ASPARAGINE-DEG1-PWY"],"termid":"GO:0033345"}


id: PBO:0080034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 20","termid":"PBO:0080034"}


id: PBO:0076009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress induced phosphoprotein 1","termid":"PBO:0076009"}


id: PBO:0108506
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eco_evidence","termid":"PBO:0108506"}


id: PBO:0001844
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.4.1.83","termid":"PBO:0001844"}


id: PBO:0013826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy protein Atg16","termid":"PBO:0013826"}


id: PBO:0091084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DSB-forming protein Rec12/Spo11","termid":"PBO:0091084"}


id: PBO:0044052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine and glycine rich protein 3","termid":"PBO:0044052"}


id: PBO:0012017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"simialar to S. pombe SPAC1F8.07c (paralog)","termid":"PBO:0012017"}


id: PBO:0073115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short chain dehydrogenase/reductase family 42E, member 1 pseudogene 3","termid":"PBO:0073115"}


id: GO:0003186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the structure of the tricuspid valve is generated and organized.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrioventricular valve morphogenesis","termid":"GO:0003181"},{"relation_name":"part_of","term_name":"tricuspid valve development","termid":"GO:0003175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tricuspid valve morphogenesis","termid":"GO:0003186"}


id: GO:1902299
data:
  {"annotated_genes":["SJAG_00247","SJAG_02607","SJAG_02074"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105146,112413,116885],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902985"}]},"cv_name":"biological_process","definition":"Any pre-replicative complex assembly that is involved in cell cycle DNA replication.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"is_a","term_name":"pre-replicative complex assembly","termid":"GO:0036388"},{"relation_name":"part_of","term_name":"cell cycle DNA replication","termid":"GO:0044786"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00247":null,"SJAG_02074":null,"SJAG_02607":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0044085","GO:0006259","GO:0008150","GO:0006260","GO:0065003"],"is_obsolete":false,"name":"pre-replicative complex assembly involved in cell cycle DNA replication","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pre-RC assembly involved in cell cycle DNA replication","type":"exact"},{"name":"pre-replication complex assembly involved in cell cycle DNA replication","type":"related"}],"termid":"GO:1902299","terms_by_termid":{"GO:1902985":null}}


id: GO:0008694
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 4-hydroxy-3-(all-trans-polyprenyl)benzoate + H+ = a 2-(all-trans-polyprenyl)phenol + CO2.","definition_xrefs":["RHEA:41680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"4-hydroxy-3-polyprenylbenzoate decarboxylase activity","secondary_identifiers":["EC:4.1.1.98","MetaCyc:RXN-15309","GO:0019167"],"synonyms":[{"name":"3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity","type":"narrow"},{"name":"3-octaprenyl-4-hydroxybenzoate decarboxylase activity","type":"narrow"},{"name":"3-polyprenyl 4-hydroxybenzoate decarboxylase activity","type":"exact"},{"name":"3-polyprenyl-4-hydroxybenzoate carboxy-lyase activity","type":"exact"},{"name":"PPHB decarboxylase activity","type":"exact"},{"name":"UbiD","type":"related"},{"name":"UbiX","type":"related"},{"name":"polyprenyl p-hydroxybenzoate decarboxylase activity","type":"exact"}],"termid":"GO:0008694"}


id: GO:1904997
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of leukocyte adhesion to arterial endothelial cell.","definition_xrefs":["GOC:BHF","GOC:BHF_miRNA","GOC:TermGenie","PMID:22267480","GO_REF:0000058","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte adhesion to vascular endothelial cell","termid":"GO:1904994"},{"relation_name":"regulates","term_name":"leukocyte adhesion to arterial endothelial cell","termid":"GO:0061757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"regulation of leukocyte adhesion to arterial endothelial cell","termid":"GO:1904997"}


id: PBO:0082677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the EKC/KEOPS protein complex; EKC/KEOPS complex is required for t6A tRNA modification and telomeric TG1-3 recombination; may have role in transcription; other complex members are Kae1p, Gon7p, Bud32p, and Cgi121p","termid":"PBO:0082677"}


id: FYPO:0000830
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of vanadate ions (VO4(3-)) than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0001985","FYPO:0002682","FYPO:0005447"],"is_obsolete":false,"name":"resistance to vanadate","synonyms":[{"name":"normal growth on sodium orthovanadate","type":"exact"},{"name":"resistance to orthovanadate","type":"exact"},{"name":"resistance to sodium orthovanadate","type":"exact"},{"name":"resistance to vanadate during mitotic cell cycle","type":"related"},{"name":"resistance to vanadate during vegetative growth","type":"exact"},{"name":"resistance to vanadate ions","type":"exact"},{"name":"resistance to vanadate(3-)","type":"exact"},{"name":"resistance to vanadium oxoanion","type":"broad"},{"name":"resistant to vanadate","type":"exact"}],"termid":"FYPO:0000830"}


id: GO:0032903
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of production of nerve growth factor (NGF).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neurotrophin production","termid":"GO:0032899"},{"relation_name":"regulates","term_name":"nerve growth factor production","termid":"GO:0032902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of nerve growth factor production","synonyms":[{"name":"regulation of NGF production","type":"exact"},{"name":"regulation of beta-nerve growth factor production","type":"exact"}],"termid":"GO:0032903"}


id: MONDO:0014586
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital myasthenic syndrome characterized by autosomal recessive inheritance of postsynaptic neuromuscular junction defects, early-onset progressive muscle weakness, and kinetic abnormalities of the AChR channel that has material basis in homozygous or compound heterozygous mutation in the CHRNE gene on chromosome 17p13.","definition_xrefs":["DOID:0110677","PMID:25792100","PMID:8755487"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myasthenic syndrome 4","termid":"MONDO:1040021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"congenital myasthenic syndrome 4B","secondary_identifiers":["MEDGEN:904424","GARD:16087","OMIM:616324","UMLS:C4225369"],"synonyms":[{"name":"CMS4B","type":"exact"},{"name":"congenital myasthenic syndrome 4B fast-channel","type":"exact"},{"name":"congenital myasthenic syndrome type 4B","type":"exact"},{"name":"myasthenic syndrome, congenital, 4B, FAST-channel","type":"related"}],"termid":"MONDO:0014586","xrefs":{"Monarch":{"xref_id":"0014586"}}}


id: PATO:0000321
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of red and blue hues.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Magenta"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color","termid":"PATO:0000014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"magenta","termid":"PATO:0000321"}


id: GO:0102435
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: myricetin + S-adenosyl-L-methionine = 7-O-methylmyricetin + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:74719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"myricetin 7-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13910"],"termid":"GO:0102435"}


id: PBO:0070273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 8","termid":"PBO:0070273"}


id: MONDO:0014229
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Syndromic microphthalmia-12 is a rare disease characterized by bilateral small eyeballs (microphthalmia), lungs that are too small (pulmonary hypoplasia), and a defect or hole in the diaphragm that allows the abdominal contents to move into the chest cavity (diaphragmatic hernia). Other symptoms may include: Severe global developmental delay with progressive motor impairment due to spasticity and/or uncontrolled repetitive muscular contractions (dystonia), with or without abnormal quick movements that resemble dancing (chorea), Defects of the cerebellum (Chiari type I malformation) Accumulation of cerebrospinal fluid inside the brain (hydrocephaly), Severe feeding difficulties, Mild facial dysmorphism with broad nasal root and tip, and a very small chin (micrognathia), Severe language delay, Wheelchair-bound. Syndromic microphthalmia-12 is caused by mutations in the RARB gene. There is no specific treatment for this syndrome.","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic microphthalmia","termid":"MONDO:0016073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"microphthalmia, syndromic 12","secondary_identifiers":["UMLS:C3809803","DOID:0111800","OMIM:615524","GARD:13235","MEDGEN:816133"],"synonyms":[{"name":"MCOPS12","type":"related"},{"name":"RARB syndromic microphthalmia","type":"exact"},{"name":"microphthalmia with or without pulmonary hypoplasia, diaphragmatic hernia, and/or Cardiac defects","type":"related"},{"name":"microphthalmia, syndromic 12","type":"exact"},{"name":"microphthalmia, syndromic type 12","type":"exact"},{"name":"syndromic microphthalmia caused by mutation in RARB","type":"exact"},{"name":"syndromic microphthalmia-12","type":"related"}],"termid":"MONDO:0014229","xrefs":{"Monarch":{"xref_id":"0014229"}}}


id: MONDO:0035581
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A rare genetic lethal multiple congenital anomalies/dysmorphic syndrome characterized by early intrauterine growth retardation, generalized edema, craniofacial dysmorphism (such as microcephaly, brachycephaly, frontal bossing, hypertelorism, short palpebral fissures, or absent nasal bone), cerebellar hypoplasia, sex reversal in male fetuses, congenital heart defects (including septal and valve defects and cardiomegaly), and late fetal loss. [Orphanet:580933]","gene_count":0,"genotype_count":0,"name":"obsolete lethal brain and heart developmental defects (obsolete MONDO:0035581)","secondary_identifiers":["Orphanet:580933"],"termid":"MONDO:0035581","xrefs":{"Monarch":{"xref_id":"0035581"}}}


id: MONDO:0012894
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"osteoarthritis","termid":"MONDO:0005178"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteoarthritis susceptibility 6","secondary_identifiers":["ICD9:715.96","SCTID:239873007","OMIM:612401"],"synonyms":[{"name":"OS6","type":"exact"},{"name":"osteoarthritis of knee","type":"related"},{"name":"osteoarthritis susceptibility 6","type":"exact"}],"termid":"MONDO:0012894","xrefs":{"Monarch":{"xref_id":"0012894"}}}


id: MONDO:1012089
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"gastric dilatation volvulus syndrome, non-human animal","termid":"MONDO:1011659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gastric dilatation volvulus syndrome, domestic guinea pig","secondary_identifiers":["OMIA:000404-10141"],"termid":"MONDO:1012089","xrefs":{"Monarch":{"xref_id":"1012089"}}}


id: MONDO:0012069
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"keratoconus","termid":"MONDO:0015486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"keratoconus 3","secondary_identifiers":["MESH:C563900","OMIM:608586","UMLS:C1837809","MEDGEN:324883"],"synonyms":[{"name":"KTCN3","type":"exact"},{"name":"keratoconus 3","type":"exact"}],"termid":"MONDO:0012069","xrefs":{"Monarch":{"xref_id":"0012069"}}}


id: PBO:0063959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-4-phosphate 5-kinase type 1 gamma","termid":"PBO:0063959"}


id: GO:0051893
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of focal adhesion formation, the establishment and maturation of focal adhesions.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-matrix adhesion","termid":"GO:0001952"},{"relation_name":"is_a","term_name":"regulation of cell-substrate junction assembly","termid":"GO:0090109"},{"relation_name":"regulates","term_name":"focal adhesion assembly","termid":"GO:0048041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0044085","GO:0007155","GO:0008150"],"is_obsolete":false,"name":"regulation of focal adhesion assembly","synonyms":[{"name":"regulation of adhesion plaque assembly","type":"related"}],"termid":"GO:0051893"}


id: PBO:0001723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin Nup132","termid":"PBO:0001723"}


id: PBO:0074037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 22","termid":"PBO:0074037"}


id: PBO:0000356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR40 (predicted)","termid":"PBO:0000356"}


id: GO:0071396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lipid stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to lipid","termid":"GO:0071396"}


id: GO:0120070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of any stomach fundus smooth muscle contraction.","definition_xrefs":["GOC:sl","PMID:15890336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of stomach fundus smooth muscle contraction","termid":"GO:0120068"},{"relation_name":"is_a","term_name":"negative regulation of gastro-intestinal system smooth muscle contraction","termid":"GO:1904305"},{"relation_name":"negatively_regulates","term_name":"stomach fundus smooth muscle contraction","termid":"GO:0014825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of stomach fundus smooth muscle contraction","termid":"GO:0120070"}


id: PBO:0076652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-box transcription factor 6","termid":"PBO:0076652"}


id: PBO:0084114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Helicase encoded by the Y' element of subtelomeric regions; highly expressed in the mutants lacking the telomerase component TLC1; potentially phosphorylated by Cdc28p; induced by treatment with 8-methoxypsoralen and UVA irradiation","termid":"PBO:0084114"}


id: MONDO:0015704
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic craniosynostosis","termid":"MONDO:0015338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"familial scaphocephaly syndrome","secondary_identifiers":["Orphanet:169163","MedDRA:10072229","GARD:20113","MEDGEN:797875","UMLS:C3267076"],"termid":"MONDO:0015704","xrefs":{"Monarch":{"xref_id":"0015704"}}}


id: GO:0048517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of trichome initiation; as in, but not restricted to, the flowering plants (Magnoliophyta, ncbi_taxonomy_id:3398).","definition_xrefs":["GOC:lr"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of trichome initiation (sensu Magnoliophyta) (obsolete GO:0048517)","synonyms":[{"name":"positive regulation of trichome initiation (sensu Magnoliophyta)","type":"exact"}],"termid":"GO:0048517"}


id: GO:0009760
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The combination of atmospheric CO2 with a 3-carbon molecule phosphoenol pyruvate (PEP) in the mesophyll cells to make a 4-carbon acid which is immediately converted to malic acid. The malic acid is then passed across to the bundle sheath cells where it is broken down again to pyruvic acid and CO2. The acid is passed back to the mesophyll cells to be used again, while the CO2 is fed into the reductive pentose-phosphate cycle (Calvin cycle) and converted into sugar and starch.","definition_xrefs":["ISBN:0816017360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon fixation","termid":"GO:0015977"},{"relation_name":"is_a","term_name":"photosynthesis, dark reaction","termid":"GO:0019685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"C4 photosynthesis","secondary_identifiers":["Wikipedia:C4_carbon_fixation"],"termid":"GO:0009760"}


id: PBO:0039713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein A5","termid":"PBO:0039713"}


id: PR:P0CT55
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tef103 gene.","definition_xrefs":["UniProtKB:P0CT55","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor 1-alpha-B/C (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC839.15c","synonyms":[{"name":"EF-1-alpha-B/C (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-tef103","type":"exact"}],"termid":"PR:P0CT55"}


id: PBO:0110052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial RNA-binding protein Yme2","termid":"PBO:0110052"}


id: MONDO:0013259
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Oguchi disease in which the cause of the disease is a mutation in the GRK1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete hereditary night blindness (obsolete MONDO:0004587)","termid":"MONDO:0004587"},{"relation_name":"is_a","term_name":"Oguchi disease","termid":"MONDO:0019152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Oguchi disease-2","secondary_identifiers":["GARD:15660","DOID:0110713","OMIM:613411","UMLS:C3150678","MEDGEN:462028"],"synonyms":[{"name":"CSNBO2","type":"exact"},{"name":"GRK1 Oguchi disease","type":"exact"},{"name":"Oguchi disease 2","type":"related"},{"name":"Oguchi disease caused by mutation in GRK1","type":"exact"},{"name":"Oguchi disease type 2","type":"exact"},{"name":"congenital stationary night blindness Oguchi type 2","type":"exact"},{"name":"night blindness, congenital stationary, Oguchi type 2","type":"related"}],"termid":"MONDO:0013259","xrefs":{"Monarch":{"xref_id":"0013259"}}}


id: PBO:0082272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Amphiphysin-like lipid raft protein; N-BAR domain protein that interacts with Rvs167p and regulates polarization of the actin cytoskeleton, endocytosis, cell polarity, cell fusion and viability following starvation or osmotic stress","termid":"PBO:0082272"}


id: PBO:0086531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; not conserved in closely related Saccharomyces species; 26% of ORF overlaps the dubious ORF YDR524C-A; insertion mutation in a cdc34-2 mutant background causes altered bud morphology","termid":"PBO:0086531"}


id: PBO:0068374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 167","termid":"PBO:0068374"}


id: PBO:0035789
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_replication_fork_pausing_at_highly_transcribed_RNA_polymerase_II_genes","termid":"PBO:0035789"}


id: SO:0001713
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 20th residue (a lysine), from the start of the H4histone protein is mono-methylated.","direct_ancestors":[{"relation_name":"is_a","term_name":"histone_methylation_site","termid":"SO:0001701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H4K20_monomethylation_site","synonyms":[{"name":"H4K20 mono-methylation site","type":"exact"},{"name":"H4K20Me1","type":"related"}],"termid":"SO:0001713"}


id: GO:0046390
data:
  {"annotated_genes":["SJAG_00836","SJAG_01661","SJAG_03355","SJAG_03759","SJAG_00444","SJAG_01298","SJAG_00915","SJAG_04849","SJAG_04354","SJAG_01814","SJAG_00779","SJAG_03164","SJAG_04681","SJAG_04634","SJAG_03925","SJAG_MIT15","SJAG_02038","SJAG_00985","SJAG_00542","SJAG_03140","SJAG_00197","SJAG_02850","SJAG_05204","SJAG_04122","SJAG_01859","SJAG_02364","SJAG_03708","SJAG_03114","SJAG_02105","SJAG_MIT37","SJAG_MIT09","SJAG_01081","SJAG_04123","SJAG_01070","SJAG_00044","SJAG_00694","SJAG_03811","SJAG_04970","SJAG_00533","SJAG_00964","SJAG_04845","SJAG_04422","SJAG_05024","SJAG_02598","SJAG_07003","SJAG_00438","SJAG_02564","SJAG_00133","SJAG_04709","SJAG_04713","SJAG_04882","SJAG_02887","SJAG_06634"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76014],"is_not":false,"summary":null,"term":"GO:0046390"},{"annotations":[78728,80706],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044208"},{"annotations":[64193],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044210"},{"annotations":[65440,60564,57215,58353,73333,78503,66803,71662],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006189"},{"annotations":[59484,59858,61710,62707,57334],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044205"},{"annotations":[74163,64435,75610],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006015"},{"annotations":[73640],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006172"},{"annotations":[57366,75680],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044209"},{"annotations":[82169],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046705"},{"annotations":[69603],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009224"},{"annotations":[65646],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006241"},{"annotations":[94784,69605],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044211"},{"annotations":[74584],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009398"},{"annotations":[59857,63912],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006177"},{"annotations":[103014,77381],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032263"},{"annotations":[104057,76647,65644],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006183"},{"annotations":[65953,77382],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032264"},{"annotations":[119870],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905707"},{"annotations":[103638,95093,94667,96662,109647,120945,95682,105473,110631,109739,104859,106843,90944,120951,105499,120957,117707],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042776"},{"annotations":[82168],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006225"},{"annotations":[89272,93788,94785,69604,90266],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044206"},{"annotations":[65645],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006228"},{"annotations":[77383,110114],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032265"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ribose phosphate, any phosphorylated ribose sugar.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribose phosphate metabolic process","termid":"GO:0019693"},{"relation_name":"is_a","term_name":"organophosphate biosynthetic process","termid":"GO:0090407"},{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic 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phosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null},"synonyms":[{"name":"ribose phosphate anabolism","type":"exact"},{"name":"ribose phosphate biosynthesis","type":"exact"},{"name":"ribose phosphate formation","type":"exact"},{"name":"ribose phosphate synthesis","type":"exact"}],"termid":"GO:0046390","terms_by_termid":{"GO:0006015":null,"GO:0006172":null,"GO:0006177":null,"GO:0006183":null,"GO:0006189":null,"GO:0006225":null,"GO:0006228":null,"GO:0006241":null,"GO:0009224":null,"GO:0009398":null,"GO:0032263":null,"GO:0032264":null,"GO:0032265":null,"GO:0042776":null,"GO:0044205":null,"GO:0044206":null,"GO:0044208":null,"GO:0044209":null,"GO:0044210":null,"GO:0044211":null,"GO:0046390":null,"GO:0046705":null,"GO:1905707":null}}


id: GO:0031443
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within fast-twitch skeletal muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The fast-twitch skeletal muscle is characterized by fast time parameters, high force development and fatiguability.","definition_xrefs":["GOC:mah","GOC:ef","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"twitch skeletal muscle contraction","termid":"GO:0014721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fast-twitch skeletal muscle fiber contraction","synonyms":[{"name":"fast-twitch skeletal fiber contraction","type":"exact"},{"name":"fast-twitch skeletal fibre contraction","type":"exact"},{"name":"fast-twitch skeletal muscle fibre contraction","type":"exact"},{"name":"fast-twitch skeletal myofiber contraction","type":"exact"},{"name":"fast-twitch skeletal myofibre contraction","type":"exact"}],"termid":"GO:0031443"}


id: PBO:0052011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"jumonji domain containing 1C","termid":"PBO:0052011"}


id: GO:0035783
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of providing, via surface-bound receptor-ligand pairs, a second, antigen-independent, signal in addition to that provided by the T cell receptor to augment CD4-positive, alpha-beta T cell activation.","definition_xrefs":["GOC:BHF","CL:0000624","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell costimulation","termid":"GO:0031295"},{"relation_name":"is_a","term_name":"positive regulation of CD4-positive, alpha-beta T cell activation","termid":"GO:2000516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"CD4-positive, alpha-beta T cell costimulation","synonyms":[{"name":"CD4-positive, alpha beta T cell costimulation","type":"exact"}],"termid":"GO:0035783"}


id: PBO:0016908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug125","termid":"PBO:0016908"}


id: PBO:0075034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-45","termid":"PBO:0075034"}


id: PBO:0067862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 164","termid":"PBO:0067862"}


id: PBO:0064854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory inhibitor subunit 14B pseudogene 5","termid":"PBO:0064854"}


id: MONDO:0017934
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aphonia-deafness-retinal dystrophy-bifid halluces-intellectual disability syndrome is a rare, genetic, multiple congenital anomalies/dysmorphic syndrome characterized by moderate to severe intellectual disability, congenital aphonia, hearing loss, optic atrophy, retinal dystrophy, broad thumbs and duplicated halluces. Facial dysmorphism (incl. thick eyebrows, ptosis, long, downslanting palpebral fissures, microstomia, low-set, posteriorly rotated ears) and genital abnormalities are also associated.","definition_xrefs":["Orphanet:324540"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aphonia-deafness-retinal dystrophy-bifid halluces-intellectual disability syndrome","secondary_identifiers":["UMLS:C4751006","GARD:21443","MEDGEN:1651057"],"synonyms":[{"name":"aphonia-deafness-retinal dystrophy-duplicated halluces-intellectual disability syndrome","type":"exact"},{"name":"aphonia-hearing loss-retinal dystrophy-duplicated halluces-intellectual disability syndrome","type":"exact"}],"termid":"MONDO:0017934","xrefs":{"Monarch":{"xref_id":"0017934"}}}


id: PATO:0000712
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000712 bouts value (obsolete PATO:0000712)","termid":"PATO:0000712"}


id: PBO:0075918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 10","termid":"PBO:0075918"}


id: PBO:0075258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 11","termid":"PBO:0075258"}


id: GO:0045211
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters cross the synaptic cleft and transmit the signal to the postsynaptic membrane.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synaptic membrane","termid":"GO:0097060"},{"relation_name":"part_of","term_name":"postsynapse","termid":"GO:0098794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"postsynaptic membrane","synonyms":[{"name":"post-synaptic membrane","type":"exact"}],"termid":"GO:0045211"}


id: PBO:0054047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1388","termid":"PBO:0054047"}


id: PBO:0000388
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.3.48","termid":"PBO:0000388"}


id: GO:1905847
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to oxidopamine.","definition_xrefs":["GO_REF:0000058","PMID:23721876","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of cellular response to oxidopamine","termid":"GO:1905846"},{"relation_name":"negatively_regulates","term_name":"cellular response to oxidopamine","termid":"GO:1905842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular response to oxidopamine","synonyms":[{"name":"down regulation of cellular response to oxidopamine","type":"exact"},{"name":"down-regulation of cellular response to oxidopamine","type":"exact"},{"name":"downregulation of cellular response to oxidopamine","type":"exact"},{"name":"inhibition of cellular response to oxidopamine","type":"narrow"}],"termid":"GO:1905847"}


id: FYPO:0007689
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cells can grow in a normally (i.e. as in wild type) polarized manner as in the presence of a polarity landmark. The landmark itself may be in a normal or abnormal location.","definition_xrefs":["PMID:21148300","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal cell growth polarization","synonyms":[{"name":"normal cell growth polarisation","type":"exact"},{"name":"normal cell growth polarization during mitotic cell cycle","type":"related"},{"name":"normal cell growth polarization during vegetative growth","type":"exact"},{"name":"normal vegetative cell growth polarization","type":"exact"}],"termid":"FYPO:0007689"}


id: FYPO:0005783
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic checkpoint complex assembly is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex assembly during vegetative growth","termid":"FYPO:0001215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal mitotic checkpoint complex assembly","synonyms":[{"name":"normal MCC assembly","type":"exact"},{"name":"normal mitotic checkpoint complex assembly during mitotic cell cycle","type":"related"},{"name":"normal mitotic checkpoint complex assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0005783"}


id: PBO:0087937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translational inhibitor and suppressor of proteasome-assembly defects; P-body component that inhibits translation, rescues proteasome base assembly defects and aggregation of regulatory particle subunits during stress when overexpressed; proposed to function to bridge the HOG and pheromone pathways with the cell wall integrity pathway in response to heat stress; interacts physically and genetically with splicing factor MSL1; large, highly-charge protein containing many disordered regions","termid":"PBO:0087937"}


id: PBO:0082408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta-tubulin; associates with alpha-tubulin (Tub1p and Tub3p) to form tubulin dimer, which polymerizes to form microtubules; mutation in human ortholog is associated with congenital fibrosis of the extraocular muscles (CFEOM) with polymicrogyria","termid":"PBO:0082408"}


id: MONDO:0021921
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"corneal disorder","termid":"MONDO:0000942"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"muscular atrophy","termid":"MONDO:0004323"},{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0005328","MONDO:0005240"],"is_obsolete":false,"name":"Arnold stickler bourne syndrome","secondary_identifiers":["MEDGEN:419426","MESH:C537431","GARD:366","UMLS:C2931492"],"synonyms":[{"name":"corneal crystals myopathy and nephropathy","type":"related"},{"name":"corneal crystals myopathy and neuropathy","type":"related"}],"termid":"MONDO:0021921","xrefs":{"Monarch":{"xref_id":"0021921"}}}


id: GO:0090086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of protein deubiquitination. Protein deubiquitination is the removal of one or more ubiquitin groups from a protein.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein deubiquitination","termid":"GO:0090085"},{"relation_name":"is_a","term_name":"negative regulation of protein modification by small protein conjugation or removal","termid":"GO:1903321"},{"relation_name":"negatively_regulates","term_name":"protein deubiquitination","termid":"GO:0016579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0070647"},{"rel_name":"regulates","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"negative regulation of protein deubiquitination","termid":"GO:0090086"}


id: GO:0036254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amiloride stimulus.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular response to amiloride (obsolete GO:0036254)","termid":"GO:0036254"}


id: PBO:0055314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2742","termid":"PBO:0055314"}


id: GO:1903504
data:
  {"annotated_genes":["SJAG_04259","SJAG_03681","SJAG_02336","SJAG_02169","SJAG_01297","SJAG_02451","SJAG_00883","SJAG_01837","SJAG_03126","SJAG_01679","SJAG_03353"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115643,92535,101405,116131,109066,117762,105713,110094,113815],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902426"},{"annotations":[96010],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140499"},{"annotations":[118538],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090267"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitotic spindle checkpoint.","definition_xrefs":["PMID:23442800","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic cell cycle","termid":"GO:0007346"},{"relation_name":"is_a","term_name":"regulation of spindle checkpoint","termid":"GO:0090231"},{"relation_name":"regulates","term_name":"mitotic spindle checkpoint signaling","termid":"GO:0071174"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00883":null,"SJAG_01297":null,"SJAG_01679":null,"SJAG_01837":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02451":null,"SJAG_03126":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of mitotic spindle checkpoint","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of mitotic cell cycle spindle checkpoint","type":"exact"}],"termid":"GO:1903504","terms_by_termid":{"GO:0090267":null,"GO:0140499":null,"GO:1902426":null}}


id: PBO:0050527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterochromatin protein 1 binding protein 3","termid":"PBO:0050527"}


id: GO:0008882
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + [L-glutamate:ammonia ligase (ADP-forming)] = diphosphate + adenylyl-[L-glutamate:ammonia ligase (ADP-forming)].","definition_xrefs":["EC:2.7.7.42"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016779","GO:0003824"],"is_obsolete":false,"name":"[glutamate-ammonia-ligase] adenylyltransferase activity","secondary_identifiers":["MetaCyc:GSADENYLATION-RXN","RHEA:18589"],"synonyms":[{"name":"ATP:L-glutamate:ammonia ligase (ADP-forming) adenylyltransferase activity","type":"related"},{"name":"ATP:[glutamate-ammonia-ligase] adenylyltransferase activity","type":"exact"},{"name":"ATP:glutamine synthetase adenylyltransferase activity","type":"related"},{"name":"adenosine triphosphate:glutamine synthetase adenylyltransferase activity","type":"related"},{"name":"glutamate-ammonia-ligase adenylyltransferase activity","type":"exact"},{"name":"glutamine-synthetase adenylyltransferase activity","type":"related"}],"termid":"GO:0008882"}


id: GO:0021664
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of rhombomere 5 are generated and organized. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order.","definition_xrefs":["GOC:jid","GO_REF:0000021","GOC:cls","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere morphogenesis","termid":"GO:0021593"},{"relation_name":"part_of","term_name":"rhombomere 5 development","termid":"GO:0021571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 5 morphogenesis","termid":"GO:0021664"}


id: PBO:0001896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structure-specific endonuclease subunit","termid":"PBO:0001896"}


id: GO:0045185
data:
  {"annotated_genes":["SJAG_00368","SJAG_01017","SJAG_01738","SJAG_01001","SJAG_00661"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[68198],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032065"},{"annotations":[101998,112715,95834],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097248"},{"annotations":[93947],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006621"}]},"cv_name":"biological_process","definition":"Any process in which a protein is maintained in a location and prevented from moving elsewhere. These include sequestration, stabilization to prevent transport elsewhere and the active retrieval of proteins that do move away.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of location","termid":"GO:0051235"},{"relation_name":"part_of","term_name":"intracellular protein localization","termid":"GO:0008104"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00368":null,"SJAG_00661":null,"SJAG_01001":null,"SJAG_01017":null,"SJAG_01738":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"maintenance of protein location","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"active protein retrieval","type":"narrow"},{"name":"maintenance of protein localization","type":"related"},{"name":"protein retention","type":"narrow"},{"name":"protein sequestering","type":"narrow"}],"termid":"GO:0045185","terms_by_termid":{"GO:0006621":null,"GO:0032065":null,"GO:0097248":null}}


id: PBO:0085357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphopantetheine:protein transferase (PPTase); activates mitochondrial acyl carrier protein (Acp1p) by phosphopantetheinylation","termid":"PBO:0085357"}


id: PBO:0068275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNASE11 and RNASE12 antisense RNA 1","termid":"PBO:0068275"}


id: GO:0043709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a cell to a solid substrate, via cell adhesion molecules, during the formation of a biofilm composed of microorganisms of the same species.","definition_xrefs":["GOC:dph","GOC:tb","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell adhesion involved in biofilm formation","termid":"GO:0043708"},{"relation_name":"part_of","term_name":"single-species submerged biofilm formation","termid":"GO:0090609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"cell adhesion involved in single-species biofilm formation","synonyms":[{"name":"cell adhesion during single-species biofilm formation","type":"related"}],"termid":"GO:0043709"}


id: PBO:0038607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACBD3 antisense RNA 1","termid":"PBO:0038607"}


id: PBO:0091092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane V-ATPase assembly factor Pkr1","termid":"PBO:0091092"}


id: GO:0030774
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + anthranilate = N-methylanthranilate + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["EC:2.1.1.111","RHEA:12180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"anthranilate N-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R00984","MetaCyc:ANTHRANILATE-N-METHYLTRANSFERASE-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:anthranilate N-methyltransferase activity","type":"related"},{"name":"anthranilic acid N-methyltransferase activity","type":"related"}],"termid":"GO:0030774"}


id: PBO:0060960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFKB inhibitor zeta","termid":"PBO:0060960"}


id: MONDO:0006603
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, epidermal skin lesion characterized by overexpression of collagen during wound healing.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"reactive cutaneous fibrous lesion","secondary_identifiers":["NCIT:C27549","DOID:2053","EFO:1000759","MEDGEN:235529","UMLS:C1335666"],"termid":"MONDO:0006603","xrefs":{"Monarch":{"xref_id":"0006603"}}}


id: FYPO:0001816
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of phosphoribosylamine-glycine ligase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000707","FYPO:0001985","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"abnormal phosphoribosylamine-glycine ligase activity","synonyms":[{"name":"abnormal GAR synthetase activity","type":"exact"}],"termid":"FYPO:0001816"}


id: MONDO:0044816
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of idiopathic torsion dystonia that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited dystonia","termid":"MONDO:0044807"},{"relation_name":"is_a","term_name":"idiopathic torsion dystonia","termid":"MONDO:0044811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"familial idiopathic torsion dystonia","secondary_identifiers":["SCTID:230318005","NCIT:C35437","ICD10CM:G24.1","MEDGEN:95980","UMLS:C0393598"],"synonyms":[{"name":"familial Idiopathic dystonia","type":"exact"},{"name":"genetic torsion dystonia","type":"related"},{"name":"hereditary idiopathic torsion dystonia","type":"exact"},{"name":"idiopathic familial dystonia","type":"exact"}],"termid":"MONDO:0044816","xrefs":{"Monarch":{"xref_id":"0044816"}}}


id: PBO:0039027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with GTPase domain, ankyrin repeat and PH domain 3","termid":"PBO:0039027"}


id: MONDO:0016820
data:
  {"annotated_genes":["SJAG_03145"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87738],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013542"}]},"cv_name":"mondo","definition":"Moyamoya disease (MMD) is a rare intracranial arteriopathy involving progressive stenosis of the cerebral vasculature located at the base of the brain causing transient ischemic attacks or strokes.","definition_xrefs":["Orphanet:2573"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral arterial disease","termid":"MONDO:0006693"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03145":null},"genotype_count":0,"is_obsolete":false,"name":"Moyamoya disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NORD:1457","NANDO:2200850","ICD10CM:I67.5","MESH:D009072","ICD9:437.5","NANDO:1200183","NCIT:C84895","OMIMPS:252350","UMLS:C0026654","DOID:13099","GARD:7064","NANDO:2100228","SCTID:89142007","icd11.foundation:369231682","icd11.foundation:1746892088","MedDRA:10028047","MEDGEN:7726"],"synonyms":[{"name":"MYMY","type":"related"},{"name":"Moyamoya disease, primary","type":"related"},{"name":"Moyamoya disease, secondary","type":"related"},{"name":"idiopathic Moyamoya disease","type":"exact"},{"name":"progressive intracranial arterial occlusion","type":"exact"}],"termid":"MONDO:0016820","terms_by_termid":{"MONDO:0013542":null},"xrefs":{"Monarch":{"xref_id":"0016820"}}}


id: GO:0031718
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1 cannabinoid receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cannabinoid receptor binding","termid":"GO:0031717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"type 1 cannabinoid receptor binding","synonyms":[{"name":"type 1 cannabinoid receptor ligand","type":"narrow"}],"termid":"GO:0031718"}


id: GO:1902061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving betaine aldehyde.","definition_xrefs":["PMID:23563483","GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"betaine aldehyde metabolic process","synonyms":[{"name":"betaine aldehyde metabolism","type":"exact"}],"termid":"GO:1902061"}


id: PBO:0054551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1951","termid":"PBO:0054551"}


id: PBO:0081609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 532","termid":"PBO:0081609"}


id: MONDO:0060774
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A superficial polypoid lesion that arises from the vagina. It is characterized by the presence of a fibroblastic stroma which is often myxoid, covered by squamous epithelial cells.","definition_xrefs":["NCIT:C4948"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyp of vagina","termid":"MONDO:0021394"},{"relation_name":"is_a","term_name":"fibroepithelial polyp","termid":"MONDO:0060765"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vaginal fibroepithelial polyp","secondary_identifiers":["UMLS:C0750071","MEDGEN:152894"],"synonyms":[{"name":"fibroepithelial polyp of the vagina","type":"exact"},{"name":"fibroepithelial polyp of vagina","type":"exact"},{"name":"vaginal fibroepithelial polyp","type":"exact"},{"name":"vaginal fibroepithelial stromal polyp","type":"exact"}],"termid":"MONDO:0060774","xrefs":{"Monarch":{"xref_id":"0060774"}}}


id: PBO:0052110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily A regulatory beta subunit 3","termid":"PBO:0052110"}


id: PBO:0073018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synthesis of cytochrome C oxidase 2","termid":"PBO:0073018"}


id: MONDO:1011111
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cryptorchidism that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cryptorchidism, non-human animal","termid":"MONDO:1010275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptorchidism, horse","secondary_identifiers":["OMIA:000243-9796"],"termid":"MONDO:1011111","xrefs":{"Monarch":{"xref_id":"1011111"}}}


id: GO:0014832
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the urinary bladder. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The urinary bladder is a musculomembranous sac along the urinary tract.","definition_xrefs":["PMID:11768524","PMID:18276178","GOC:mtg_muscle","PMID:538956","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urinary tract smooth muscle contraction","termid":"GO:0014848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"urinary bladder smooth muscle contraction","termid":"GO:0014832"}


id: GO:0009457
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A group of small electron carriers, characteristic of anaerobic bacteria, photosynthetic bacteria, cyanobacteria and eukaryotic algae. Contain flavin mononucleotide.","definition_xrefs":["GOC:kd"],"gene_count":0,"genotype_count":0,"name":"obsolete flavodoxin (obsolete GO:0009457)","synonyms":[{"name":"flavodoxin","type":"exact"}],"termid":"GO:0009457"}


id: GO:0090294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transcription regulation process in which the presence of one nitrogen source leads to an increase in the frequency, rate, or extent of transcription of specific genes involved in the metabolism of other nitrogen sources.","definition_xrefs":["GOC:mah","GOC:rb","PMID:19104072"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA-templated transcription","termid":"GO:0045893"},{"relation_name":"is_a","term_name":"nitrogen catabolite regulation of transcription","termid":"GO:0090293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006355","GO:0008150","GO:0006351","GO:0010467"],"is_obsolete":false,"name":"nitrogen catabolite activation of transcription","synonyms":[{"name":"positive regulation of transcription by nitrogen catabolites","type":"exact"}],"termid":"GO:0090294"}


id: PBO:0030313
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_cell_cycle_arrest_with_replicated_DNA","termid":"PBO:0030313"}


id: MONDO:0012841
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory bowel disease that has material basis in variation in the chromosome region 5p13.1.","definition_xrefs":["PMID:17447842","DOID:0110888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"inflammatory bowel disease 18","secondary_identifiers":["UMLS:C2677090","MESH:C567377","MEDGEN:393655","OMIM:612262"],"synonyms":[{"name":"IBD18","type":"exact"},{"name":"inflammatory bowel disease 18","type":"exact"},{"name":"inflammatory bowel disease type 18","type":"exact"}],"termid":"MONDO:0012841","xrefs":{"Monarch":{"xref_id":"0012841"}}}


id: PBO:0113349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for initiation of the G0 program; prevents degradation of nutrient-regulated mRNAs via the 5'-3' mRNA decay pathway; phosphorylation (S64) by Rim15p increases interaction with and inhibition of PP2A-Cdc55 for timely mitotic progression; can also activate PP2A-Cdc55 complexes and influence Cdc55p localization along with Igo1p; GFP protein localizes to the cytoplasm and nucleus; IGO2 has a paralog, IGO1, that arose from the whole genome duplication","termid":"PBO:0113349"}


id: MONDO:0021573
data:
  {"annotated_genes":["SJAG_04003"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87717],"is_not":false,"summary":null,"term":"MONDO:0021573"}]},"cv_name":"mondo","definition":"Any inherited oocyte maturation defect in which the cause of the disease is a mutation in the TUBB8 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited oocyte maturation defect","termid":"MONDO:0014769"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04003":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"oocyte maturation defect 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4225210","GARD:18496","OMIM:616780","MEDGEN:903836"],"synonyms":[{"name":"OOMD2","type":"exact"},{"name":"TUBB8 inherited oocyte maturation defect","type":"exact"},{"name":"inherited oocyte maturation defect caused by mutation in TUBB8","type":"exact"},{"name":"oocyte maturation defect 2","type":"exact"}],"termid":"MONDO:0021573","terms_by_termid":{"MONDO:0021573":null},"xrefs":{"Monarch":{"xref_id":"0021573"}}}


id: GO:0031500
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A high molecular weight complex characterized in S. pombe containing the cell-end anchoring protein Tea1. This complex is transported to the cell ends by microtubules and is involved in bipolar growth and the maintennce of normal cell polarity.","definition_xrefs":["PMID:15936270"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule associated complex","termid":"GO:0005875"},{"relation_name":"part_of","term_name":"polarisome","termid":"GO:0000133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0015630","GO:0005737","GO:0032991","GO:0005938"],"is_obsolete":false,"name":"Tea1 cell-end complex","termid":"GO:0031500"}


id: PBO:0116771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TCF25 ribosome quality control complex subunit","termid":"PBO:0116771"}


id: PBO:0031793
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_cell_cycle_phase_transition","termid":"PBO:0031793"}


id: MONDO:0054700
data:
  {"annotated_genes":["SJAG_04290"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88347],"is_not":false,"summary":null,"term":"MONDO:0054700"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"proteosome-associated autoinflammatory syndrome","termid":"MONDO:0009726"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005046"],"is_obsolete":false,"name":"proteasome-associated autoinflammatory syndrome 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4747989","GARD:18447","MEDGEN:1648482","OMIM:618048","DOID:0060914"],"synonyms":[{"name":"PRAAS2","type":"related"},{"name":"proteasome-associated autoinflammatory syndrome 2","type":"exact"}],"termid":"MONDO:0054700","terms_by_termid":{"MONDO:0054700":null},"xrefs":{"Monarch":{"xref_id":"0054700"}}}


id: PBO:0086977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit of the Glc7p type-1 protein phosphatase; involved with Reg1p, Glc7p, and Snf1p in regulation of glucose-repressible genes, also involved in glucose-induced proteolysis of maltose permease; REG2 has a paralog, REG1, that arose from the whole genome duplication","termid":"PBO:0086977"}


id: PBO:0017595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med18","termid":"PBO:0017595"}


id: PBO:0077717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transportin 1 pseudogene 3","termid":"PBO:0077717"}


id: GO:0102764
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 6-deoxotyphasterol + O2 + a reduced electron acceptor = 6-deoxocastasterone + H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 6-deoxotyphasterol C-23 hydroxylase activity (obsolete GO:0102764)","termid":"GO:0102764"}


id: PBO:0069855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1141, pseudogene","termid":"PBO:0069855"}


id: PR:Q10178-3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A U2 snRNP component prp10 (Schizosaccharomyces pombe 972h-) that is a translation product of some mRNA giving rise to a protein with the amino acid sequence represented by UniProtKB:Q10178-3.","definition_xrefs":["UniProtKB:Q10178","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"U2 snRNP component prp10 (Schizosaccharomyces pombe 972h-)","termid":"PR:Q10178"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP component prp10 isoform E (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.03c","secondary_identifiers":["UniProtKB:Q10178-3"],"synonyms":[{"name":"Spom972h-SF3B1/iso:E","type":"exact"}],"termid":"PR:Q10178-3"}


id: PBO:0109171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYLD antisense RNA 2","termid":"PBO:0109171"}


id: GO:0046032
data:
  {"annotated_genes":["SJAG_05314","SJAG_02009","SJAG_02369","SJAG_02135","SJAG_04048","SJAG_04334","SJAG_01310","SJAG_00685","SJAG_03903","SJAG_04192","SJAG_00027","SJAG_02785","SJAG_03373","SJAG_00605","SJAG_06622","SJAG_02796","SJAG_02945","SJAG_02107","SJAG_04495","SJAG_00839","SJAG_03660","SJAG_03828","SJAG_00461","SJAG_06621"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111237,105204,79584,111241,111242,105461,107282,99808,107284,111238,107653,118210,107283,107652,111243,111239,111240,74174,100079,96339],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[90422],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[74826,77883],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[71755],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006110"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ADP, adenosine 5'-diphosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide catabolic process","termid":"GO:0009154"},{"relation_name":"is_a","term_name":"purine ribonucleoside diphosphate catabolic process","termid":"GO:0009181"},{"relation_name":"is_a","term_name":"ADP metabolic process","termid":"GO:0046031"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00685":null,"SJAG_00839":null,"SJAG_01310":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02785":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"ADP catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"ADP breakdown","type":"exact"},{"name":"ADP catabolism","type":"exact"},{"name":"ADP degradation","type":"exact"}],"termid":"GO:0046032","terms_by_termid":{"GO:0006110":null,"GO:0045820":null,"GO:0061613":null,"GO:0061621":null}}


id: GO:0060509
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a type I pneumocyte. A type I pneumocyte is a flattened cell with greatly attenuated cytoplasm and a paucity of organelles.","definition_xrefs":["GOC:dph","GOC:mtg_lung","ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung epithelial cell differentiation","termid":"GO:0060487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"type I pneumocyte differentiation","synonyms":[{"name":"membranous pneumocyte differentiation","type":"exact"},{"name":"small alveolar cell differentiation","type":"related"},{"name":"squamous alveolar cell differentiation","type":"related"}],"termid":"GO:0060509"}


id: PBO:0056363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAPK6 divergent transcript","termid":"PBO:0056363"}


id: PBO:0082894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cyclin-dependent kinase inhibitor (CKI); inhibitor of Cdc28-Clb kinase complexes that controls G1/S phase transition, preventing premature S phase and ensuring genomic integrity; phosphorylated by Clb5/6-Cdk1 and Cln1/2-Cdk1 kinase which regulate timing of Sic1p degradation; phosphorylation targets Sic1p for SCF(CDC4)-dependent turnover; functional homolog of mammalian Kip1","termid":"PBO:0082894"}


id: PBO:0083671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endoplasmic reticulum transmembrane protein; may interact with ribosomes, based on co-purification experiments; homolog of human BAP31 protein; YET1 has a paralog, YET2, that arose from the whole genome duplication","termid":"PBO:0083671"}


id: GO:1990950
data:
  {"annotated_genes":["SJAG_00666","SJAG_04853","SJAG_00145"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101961,104109],"is_not":false,"summary":null,"term":"GO:1990950"},{"annotations":[96978],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905191"}]},"cv_name":"biological_process","definition":"The cell cycle process in which a cell progresses from metaphase to anaphase as part of meiosis II.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metaphase/anaphase transition of meiotic cell cycle","termid":"GO:0044785"},{"relation_name":"is_a","term_name":"meiosis II cell cycle process","termid":"GO:0061983"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00145":null,"SJAG_00666":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"metaphase/anaphase transition of meiosis II","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"meiosis II metaphase/anaphase transition","type":"exact"},{"name":"second meiotic metaphase/anaphase transition","type":"related"}],"termid":"GO:1990950","terms_by_termid":{"GO:1905191":null,"GO:1990950":null}}


id: SO:0000978
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a guide_RNA that specifies the insertions and deletions of bases in the editing of a target mRNA.","definition_xrefs":["SO:jk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guide_RNA_region","termid":"SO:0000930"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"template_region","synonyms":[{"name":"information region","type":"exact"},{"name":"template region","type":"exact"}],"termid":"SO:0000978"}


id: MONDO:0017410
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Porencephaly is characterized by a circumscribed intracerebral cavity of variable size that may be bordered by abnormal polymicrogyric gray matter. In extreme cases, this cavity may result in a communication between the pial surface and the ventricle; this is termed schizencephaly.","definition_xrefs":["Orphanet:2940"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete cerebral malformation with epilepsy (obsolete MONDO:0015655)","termid":"MONDO:0015655"},{"relation_name":"is_a","term_name":"encephaloclastic disorder","termid":"MONDO:0017103"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"porencephaly","secondary_identifiers":["DOID:0060263","MedDRA:10036172","icd11.foundation:137059367","UMLS:C4082173","GARD:7430","NANDO:1201074","HP:0002132","MESH:D065708","MEDGEN:901502"],"termid":"MONDO:0017410","xrefs":{"Monarch":{"xref_id":"0017410"}}}


id: GO:0004336
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-galactosyl-N-acylsphingosine + H2O = D-galactose + N-acylsphingosine.","definition_xrefs":["EC:3.2.1.46"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylceramidase activity","termid":"GO:0017042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016798","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"galactosylceramidase activity","secondary_identifiers":["RHEA:14297","Reactome:R-HSA-1606564","MetaCyc:GALACTOSYLCERAMIDASE-RXN"],"synonyms":[{"name":"D-galactosyl-N-acylsphingosine galactohydrolase activity","type":"related"},{"name":"beta-galactocerebrosidase activity","type":"related"},{"name":"beta-galactosylceramidase activity","type":"related"},{"name":"ceramide galactosidase activity","type":"related"},{"name":"cerebroside beta-galactosidase activity","type":"related"},{"name":"cerebroside galactosidase activity","type":"related"},{"name":"galactocerebrosidase activity","type":"related"},{"name":"galactocerebroside beta-galactosidase activity","type":"related"},{"name":"galactocerebroside galactosidase activity","type":"related"},{"name":"galactocerebroside-beta-D-galactosidase activity","type":"related"},{"name":"galactosylceramidase I","type":"related"},{"name":"galactosylceramide beta-galactosidase activity","type":"related"},{"name":"galactosylcerebrosidase activity","type":"related"},{"name":"galcerase activity","type":"related"},{"name":"lactosylceramidase I","type":"related"},{"name":"lactosylceramidase activity","type":"related"}],"termid":"GO:0004336"}


id: GO:0009324
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that possesses D-amino-acid dehydrogenase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"D-amino-acid dehydrogenase complex","termid":"GO:0009324"}


id: PR:000059626
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An inner kinetochore subunit cnp20 (Schizosaccharomyces pombe) that has not been phosphorylated on residues equivalent to Ser-3, Thr-8, Ser-12, Ser-13, Ser-14, Thr-21, Ser-23, Thr-29, Ser-31, Ser-33, Thr-36, Ser-39, Thr-43, and Thr-45 of the amino acid sequence represented by UniProtKB:Q9HGK9. Example: UniProtKB:Q9HGK9, Ser-3/Thr-8/Ser-12/Ser-13/Ser-14/Thr-21/Ser-23/Thr-29/Ser-31/Ser-33/Thr-36/Ser-39/Thr-43/Thr-45, PR:000026291.","definition_xrefs":["PMID:34810257","PomBase:VW","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cnp20/UnPhos-CIM","pombase_gene_id":"SPBC800.13","synonyms":[{"name":"Cnp20/UnPhos-CIM","type":"exact"},{"name":"PomBase_original_PRO_term_name: inner kinetochore subunit cnp20 unphosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-cnp20/UnPhos:1","type":"exact"},{"name":"UniProtKB:Q9HGK9, Ser-3/Thr-8/Ser-12/Ser-13/Ser-14/Thr-21/Ser-23/Thr-29/Ser-31/Ser-33/Thr-36/Ser-39/Thr-43/Thr-45, PR:000026291","type":"narrow"}],"termid":"PR:000059626"}


id: PBO:0029452
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_cell_cycle_arrest,_elongated_cell","termid":"PBO:0029452"}


id: PBO:0086259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that regulates nuclear import of Rnr2p and Rnr4p; phosphorylated by Dun1p in response to DNA damage and degraded; N-terminal half shows similarity to S. pombe Spd1 protein; DIF1 has a paralog, SML1, that arose from the whole genome duplication","termid":"PBO:0086259"}


id: GO:0032749
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-25 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-25 production","termid":"GO:0032669"},{"relation_name":"positively_regulates","term_name":"interleukin-25 production","termid":"GO:0032629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of interleukin-25 production","secondary_identifiers":["GO:0045537","GO:0150150"],"synonyms":[{"name":"activation of interleukin-25 production","type":"narrow"},{"name":"positive regulation of IL-25 production","type":"exact"},{"name":"positive regulation of interleukin-25 biosynthetic process","type":"narrow"},{"name":"positive regulation of interleukin-25 secretion","type":"narrow"},{"name":"stimulation of interleukin-25 production","type":"narrow"},{"name":"up regulation of interleukin-25 production","type":"exact"},{"name":"up-regulation of interleukin-25 production","type":"exact"},{"name":"upregulation of interleukin-25 production","type":"exact"}],"termid":"GO:0032749"}


id: MONDO:0600002
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infectious disease caused by certain viruses or bacteria that can damage the walls of tiny blood vessels, making them leak, and can hamper the blood's ability to clot and cause severe, life-threatening illness.","direct_ancestors":[{"relation_name":"is_a","term_name":"infectious disease","termid":"MONDO:0005550"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemorrhagic fever","secondary_identifiers":["NCIT:C36169"],"synonyms":[{"name":"haemorrhagic fever","type":"exact"}],"termid":"MONDO:0600002","xrefs":{"Monarch":{"xref_id":"0600002"}}}


id: GO:0050655
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dermatan sulfate proteoglycans, which consist of a core protein linked to a dermatan sulfate glycosaminoglycan. The dermatan sulfate chain is composed of the repeating disaccharide unit beta-(1,4)-D-hexuronic acid-beta-(1,3)-N-acetyl-D-galactosamine. The former can be a mixture of sulfated and nonsulfated D-glucuronic and L-iduronic acids, and the latter can be O-sulfated.","definition_xrefs":["PMID:17239763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteoglycan metabolic process","termid":"GO:0006029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dermatan sulfate proteoglycan metabolic process","synonyms":[{"name":"chondroitin sulfate B proteoglycan metabolic process","type":"exact"},{"name":"chondroitin sulfate B proteoglycan metabolism","type":"exact"},{"name":"dermatan sulfate proteoglycan metabolism","type":"exact"},{"name":"dermatan sulphate proteoglycan metabolic process","type":"exact"},{"name":"dermatan sulphate proteoglycan metabolism","type":"exact"}],"termid":"GO:0050655"}


id: GO:0050465
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-(hydroxyamino)quinoline N-oxide + 2 NAD(P)+ + H2O = 4-nitroquinoline N-oxide + 2 NAD(P)H + 2 H+.","definition_xrefs":["EC:1.7.1.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor","termid":"GO:0046857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"nitroquinoline-N-oxide reductase [NAD(P)H] activity","secondary_identifiers":["MetaCyc:1.7.1.9-RXN"],"synonyms":[{"name":"4-(hydroxyamino)quinoline N-oxide:NADP+ oxidoreductase activity","type":"related"},{"name":"4-nitroquinoline 1-oxide reductase activity","type":"related"},{"name":"4NQO reductase activity","type":"related"},{"name":"NAD(P)H2:4-nitroquinoline-N-oxide oxidoreductase activity","type":"related"},{"name":"NAD(P)H:4-nitroquinoline-N-oxide oxidoreductase activity","type":"related"}],"termid":"GO:0050465"}


id: MONDO:1011892
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinal intradural arachnoid cyst, non-human animal","secondary_identifiers":["OMIA:001923"],"termid":"MONDO:1011892","xrefs":{"Monarch":{"xref_id":"1011892"}}}


id: MONDO:0003269
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete subependymal giant cell astrocytoma (obsolete MONDO:0003269)","termid":"MONDO:0003269","xrefs":{"Monarch":{"xref_id":"0003269"}}}


id: PR:Q9URV1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A platelet-activating factor acetylhydrolase 2, cytoplasmic that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02437","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC106.11c","secondary_identifiers":["UniProtKB:Q9URV1"],"synonyms":[{"name":"1-alkyl-2-acetylglycerophosphocholine esterase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"2-acetyl-1-alkylglycerophosphocholine esterase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PAFAH2","type":"exact"}],"termid":"PR:Q9URV1"}


id: FYPO:0003290
data:
  {"alleles_by_uniquename":{"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121508],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003727"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the structure of the glycan moiety of a glycoprotein differs from wild type.","definition_xrefs":["PMID:9125114","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"},{"relation_name":"output_of","term_name":"abnormal protein glycosylation during vegetative growth","termid":"FYPO:0001910"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04697":null},"genotype_count":1,"genotypes_by_uniquename":{"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0002494"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002494","FYPO:0002274","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal glycoprotein glycan structure","references_by_uniquename":{"PMID:36058798":null},"single_locus_annotated_genes":["SJAG_04697"],"single_locus_genotype_uniquenames":["gms1delta"],"synonyms":[{"name":"abnormal glycoprotein oligosaccharide structure","type":"related"}],"termid":"FYPO:0003290","terms_by_termid":{"FYPO:0003727":null,"FYPO_EXT:0000001":null}}


id: PBO:0030855
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_tacrolimus","termid":"PBO:0030855"}


id: GO:0051851
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an host alters or subverts a process in a symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of process of another organism","termid":"GO:0035821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"host-mediated perturbation of symbiont process","synonyms":[{"name":"modification by host of symbiont morphology or physiology","type":"related"},{"name":"modulation by host of symbiont process","type":"exact"}],"termid":"GO:0051851"}


id: MONDO:0020776
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with bacteria of the family CHLAMYDIACEAE.","definition_xrefs":["MESH:D002694"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gram-negative bacterial infections","termid":"MONDO:0021678"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chlamydiaceae infections","secondary_identifiers":["EFO:1001288","UMLS:C0008153","MEDGEN:3013"],"synonyms":[{"name":"Chlamydiaceae Infection","type":"related"},{"name":"Chlamydiaceae Infections","type":"related"},{"name":"Infection, Chlamydiaceae","type":"related"},{"name":"Infections, Chlamydiaceae","type":"related"}],"termid":"MONDO:0020776","xrefs":{"Monarch":{"xref_id":"0020776"}}}


id: PBO:0072963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretogranin V","termid":"PBO:0072963"}


id: MONDO:0016216
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Adult hepatocellular carcinoma is the most common primary liver cancer of adulthood. Derived from well-differentiated hepatocytes, it often develops from chronic liver cirrhosis which is most often due to hepatitis B and C virus or alcohol abuse. Symptoms are hepatic mass, abdominal pain and, in advanced stages, jaundice, cachexia and liver failure.","definition_xrefs":["Orphanet:210159"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hepatocellular carcinoma","termid":"MONDO:0007256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"adult hepatocellular carcinoma","secondary_identifiers":["MEDGEN:124633","UMLS:C0279607","DOID:0070328","GARD:6608","NCIT:C7956"],"synonyms":[{"name":"adult HCC","type":"exact"},{"name":"adult hepatocellular carcinoma","type":"exact"},{"name":"adult hepatoma","type":"exact"},{"name":"adult primary carcinoma of liver cell","type":"exact"},{"name":"adult primary carcinoma of the liver cell","type":"exact"},{"name":"adult primary hepatocellular carcinoma","type":"exact"},{"name":"adult primary hepatoma","type":"exact"},{"name":"adult primary liver cell carcinoma","type":"exact"},{"name":"hepatocellular cancer","type":"broad"},{"name":"hepatocellular carcinoma of adults","type":"exact"}],"termid":"MONDO:0016216","xrefs":{"Monarch":{"xref_id":"0016216"}}}


id: MONDO:0005968
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The commonest and least serious of the deep mycoses, characterized by nodular lesions of the cutaneous and subcutaneous tissues. It is caused by inhalation of contaminated dust or by infection of a wound.","definition_xrefs":["MESH:D013174"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"primary systemic mycosis","termid":"MONDO:0000308"},{"relation_name":"excluded_subClassOf","term_name":"dermatomycosis","termid":"MONDO:0002040"},{"relation_name":"is_a","term_name":"fungal infectious disease","termid":"MONDO:0002041"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sporotrichosis","secondary_identifiers":["MEDGEN:21298","ICD10CM:B42","icd11.foundation:579570784","EFO:0007494","UMLS:C0038034","GARD:7692","ICD9:117.1","SCTID:42094007","DOID:14484","Orphanet:826","MedDRA:10041736"],"synonyms":[{"name":"rose gardener's disease","type":"related"}],"termid":"MONDO:0005968","xrefs":{"Monarch":{"xref_id":"0005968"}}}


id: PBO:0089138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial glutamyl-tRNA amidotransferase beta subunit Gta2","termid":"PBO:0089138"}


id: PBO:0017834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"siroheme synthase Met8 (predicted)","termid":"PBO:0017834"}


id: PBO:0058422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4791","termid":"PBO:0058422"}


id: MONDO:0014007
data:
  {"annotated_genes":["SJAG_04380"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87048],"is_not":false,"summary":null,"term":"MONDO:0014007"}]},"cv_name":"mondo","definition":"Any Aicardi-Goutieres syndrome in which the cause of the disease is a mutation in the ADAR gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Aicardi-Goutieres syndrome","termid":"MONDO:0018866"},{"relation_name":"is_a","term_name":"ADAR-related type 1 interferonopathy","termid":"MONDO:0700261"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04380":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0006025","MONDO:0005046"],"is_obsolete":false,"name":"Aicardi-Goutieres syndrome 6","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:761287","UMLS:C3539013","OMIM:615010","NANDO:2200898","GARD:15894"],"synonyms":[{"name":"ADAR Aicardi-Goutieres syndrome","type":"exact"},{"name":"AGS6","type":"related"},{"name":"Adar Aicardi-Goutieres syndrome","type":"exact"},{"name":"Aicardi-Goutieres syndrome 6","type":"exact"},{"name":"Aicardi-Goutieres syndrome caused by mutation in ADAR","type":"exact"},{"name":"Aicardi-Goutieres syndrome caused by mutation in Adar","type":"exact"},{"name":"Aicardi-Goutieres syndrome type 6","type":"exact"}],"termid":"MONDO:0014007","terms_by_termid":{"MONDO:0014007":null},"xrefs":{"Monarch":{"xref_id":"0014007"}}}


id: MONDO:0011864
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"common variable immunodeficiency","termid":"MONDO:0015517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"immunodeficiency, common variable, 1","secondary_identifiers":["OMIM:607594","UMLS:C3149378","DOID:0081144","MEDGEN:460728"],"synonyms":[{"name":"CVID1","type":"related"},{"name":"antibody deficiency due to Icos defect","type":"related"},{"name":"immunodeficiency, common variable","type":"related"},{"name":"immunodeficiency, common variable, 1","type":"exact"},{"name":"immunodeficiency, common variable, type 1","type":"exact"}],"termid":"MONDO:0011864","xrefs":{"Monarch":{"xref_id":"0011864"}}}


id: SO:0000972
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000972 RNA_replication_mode (obsolete SO:0000972)","synonyms":[{"name":"RNA replication mode","type":"exact"}],"termid":"SO:0000972"}


id: FYPO:0007816
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of polyphosphate measured in a cell (total or free) is higher than normal.","definition_xrefs":["PMID:34147496","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular polyphosphate level","synonyms":[{"name":"increased cellular polyphosphate level during mitotic cell cycle","type":"related"},{"name":"increased cellular polyphosphate level during vegetative growth","type":"exact"},{"name":"increased polyphosphate accumulation","type":"related"}],"termid":"FYPO:0007816"}


id: PBO:0004711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESCRT III complex subunit (predicted)","termid":"PBO:0004711"}


id: MONDO:0011910
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autosomal dominant limb-girdle muscular dystrophy type 1C (obsolete MONDO:0011910)","secondary_identifiers":["Orphanet:265","SCTID:719986000","DOID:0110302","OMIM:607801","NCIT:C148318","MESH:C563362"],"termid":"MONDO:0011910","xrefs":{"Monarch":{"xref_id":"0011910"}}}


id: GO:0019732
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An immune response against a fungus mediated through a body fluid. An example of this process is the antifungal humoral response in Drosophila melanogaster.","definition_xrefs":["GOC:go_curators","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antimicrobial humoral response","termid":"GO:0019730"},{"relation_name":"is_a","term_name":"defense response to fungus","termid":"GO:0050832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antifungal humoral response","secondary_identifiers":["GO:0019734","GO:0006966"],"termid":"GO:0019732"}


id: PBO:0087436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit e of mitochondrial F1F0-ATPase; ATPase is a large, evolutionarily conserved enzyme complex required for ATP synthesis; essential for the dimeric and oligomeric state of ATP synthase, which in turn determines the shape of inner membrane cristae","termid":"PBO:0087436"}


id: PBO:0072530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 60","termid":"PBO:0072530"}


id: PBO:0030327
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_CDP-diacylglycerol-serine_O-phosphatidyltransferase_activity","termid":"PBO:0030327"}


id: GO:0055101
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Stops, prevents or reduces the activity of a glycerophospholipase, an enzyme that catalyzes of the hydrolysis of a glycerophospholipid.","definition_xrefs":["GOC:ai","GOC:BHF","GOC:rl"],"gene_count":0,"genotype_count":0,"name":"obsolete glycerophospholipase inhibitor activity (obsolete GO:0055101)","synonyms":[{"name":"glycerophospholipase inhibitor activity","type":"exact"}],"termid":"GO:0055101"}


id: PBO:0055112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2531","termid":"PBO:0055112"}


id: MONDO:0006557
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hemangioma arising from the subcutaneous soft tissues.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system benign neoplasm","termid":"MONDO:0000652"},{"relation_name":"is_a","term_name":"hemangioma","termid":"MONDO:0006500"},{"relation_name":"is_a","term_name":"subcutaneous tissue disorder","termid":"MONDO:0019296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemangioma of subcutaneous tissue","secondary_identifiers":["UMLS:C0685200","DOID:13081","MEDGEN:146343","SCTID:93473009","NCIT:C8540"],"synonyms":[{"name":"angioma of subcutaneous tissue","type":"exact"},{"name":"angioma of the subcutaneous tissue","type":"exact"},{"name":"hemangioma of subcutaneous tissue","type":"exact"},{"name":"hemangioma of superficial fascia","type":"exact"},{"name":"hemangioma of the subcutaneous tissue","type":"exact"},{"name":"subcutaneous angioma","type":"exact"},{"name":"subcutaneous haemangioma","type":"exact"},{"name":"subcutaneous hemangioma","type":"exact"},{"name":"subcutaneous tissue angioma","type":"exact"},{"name":"subcutaneous tissue hemangioma","type":"exact"},{"name":"superficial fascia hemangioma","type":"exact"}],"termid":"MONDO:0006557","xrefs":{"Monarch":{"xref_id":"0006557"}}}


id: PBO:0085399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane protein, component of eisosomes; long-lived protein that remains stable in eisosomes of mother cells while other eisosome proteins, Pil1p and Lsp1p, turn over; may function to anchor the eisosome in place; sporulation and plasma membrane sphingolipid content are altered in mutants; localizes to furrow-like invaginations (MCC patches)","termid":"PBO:0085399"}


id: PBO:0086625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and the nucleus and is induced in response to the DNA-damaging agent MMS","termid":"PBO:0086625"}


id: GO:0002260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of regulating the proliferation and elimination of lymphocytes such that the total number of lymphocytes within a whole or part of an organism is stable over time in the absence of an outside stimulus.","definition_xrefs":["GOC:add","PMID:15826826","PMID:16551252","PMID:16551262","PMID:16319493"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte homeostasis","termid":"GO:0001776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lymphocyte homeostasis","termid":"GO:0002260"}


id: PBO:0112266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assigned_by","termid":"PBO:0112266"}


id: GO:1904304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of gastro-intestinal system smooth muscle contraction.","definition_xrefs":["PMID:10821044","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of smooth muscle contraction","termid":"GO:0006940"},{"relation_name":"regulates","term_name":"gastro-intestinal system smooth muscle contraction","termid":"GO:0014831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of gastro-intestinal system smooth muscle contraction","termid":"GO:1904304"}


id: MONDO:0015226
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndrome with limb malformations as a major feature (obsolete MONDO:0015226)","secondary_identifiers":["Orphanet:109009"],"termid":"MONDO:0015226","xrefs":{"Monarch":{"xref_id":"0015226"}}}


id: GO:0120042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of macrophage proliferation.","definition_xrefs":["GOC:rph","GOC:BHF","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte proliferation","termid":"GO:0070664"},{"relation_name":"is_a","term_name":"regulation of macrophage proliferation","termid":"GO:0120040"},{"relation_name":"negatively_regulates","term_name":"macrophage proliferation","termid":"GO:0061517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of macrophage proliferation","termid":"GO:0120042"}


id: PR:P87027
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spg1 gene.","definition_xrefs":["UniProtKB:P87027","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septum-promoting GTP-binding protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1565.06c","synonyms":[{"name":"GTPase spg1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-spg1","type":"exact"},{"name":"sid3 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87027"}


id: SO:0002132
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A long non-coding transcript that contains a protein coding gene within its intronic sequence on the same strand, with no overlap of exonic sequence.","definition_xrefs":["GENECODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lncRNA","termid":"SO:0001877"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sense_overlap_lncRNA","synonyms":[{"name":"sense overlap lncRNA","type":"exact"},{"name":"sense_overlap_lncRNA","type":"exact"},{"name":"sense_overlapping","type":"exact"}],"termid":"SO:0002132"}


id: PBO:0076353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin 17","termid":"PBO:0076353"}


id: PBO:0079356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha 1c","termid":"PBO:0079356"}


id: GO:0072391
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phenol, a compound that consists of a benzene ring with one attached hydroxyl group.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"phenol metabolic process","termid":"GO:0072390"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phenol biosynthetic process","termid":"GO:0072391"}


id: FYPO:0008235
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the assembly of the nuclear RNA-directed RNA polymerase complex is abolished.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-containing complex assembly","termid":"FYPO:0000447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished nuclear RNA-directed RNA polymerase complex assembly","termid":"FYPO:0008235"}


id: MONDO:0018860
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microlissencephaly-micromelia syndrome is a syndrome of abnormal cortical development, characterized by severe prenatal polyhydramnios, postnatal microcephaly, lissencephaly, upper limb micromelia, dysmorphic facies (coarse face, hypertrichosis, and short nose with long philtrum), intractable seizures, and early death. Hypoparathyroidism was noted in one case.","definition_xrefs":["Orphanet:50810"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microlissencephaly-micromelia syndrome","secondary_identifiers":["GARD:18840","UMLS:C4509878","MEDGEN:1377242"],"synonyms":[{"name":"Basel-Vanagaite-Sirota syndrome","type":"exact"}],"termid":"MONDO:0018860","xrefs":{"Monarch":{"xref_id":"0018860"}}}


id: GO:0070587
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of attachment of a cell to another cell affecting gastrulation.","definition_xrefs":["GOC:dsf","PMID:19091770"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-cell adhesion","termid":"GO:0022407"},{"relation_name":"regulates","term_name":"cell-cell adhesion involved in gastrulation","termid":"GO:0070586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"regulation of cell-cell adhesion involved in gastrulation","termid":"GO:0070587"}


id: PBO:0080782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XK related, Y-linked pseudogene 2","termid":"PBO:0080782"}


id: PR:O60101
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phosphoglycerate kinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate kinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14F5.04c","secondary_identifiers":["UniProtKB:O60101"],"synonyms":[{"name":"SPBC14F5.04c","type":"related"},{"name":"Spom972h-pgk","type":"exact"}],"termid":"PR:O60101"}


id: PBO:0044091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 45 member A11, pseudogene","termid":"PBO:0044091"}


id: GO:2000464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of astrocyte chemotaxis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of chemotaxis","termid":"GO:0050921"},{"relation_name":"is_a","term_name":"positive regulation of glial cell migration","termid":"GO:1903977"},{"relation_name":"is_a","term_name":"regulation of astrocyte chemotaxis","termid":"GO:2000458"},{"relation_name":"positively_regulates","term_name":"astrocyte chemotaxis","termid":"GO:0035700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of astrocyte chemotaxis","termid":"GO:2000464"}


id: PATO:0001468
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature quality inhering in a bearer by virtue of the bearer's being curved towards the back or upper surface of an organism.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curved","termid":"PATO:0000406"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"curved dorsal","synonyms":[{"name":"curved posterior (human torso)","type":"exact"},{"name":"curved superior (human head)","type":"exact"}],"termid":"PATO:0001468"}


id: PBO:0079598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2E2 divergent transcript","termid":"PBO:0079598"}


id: PBO:0050343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 45","termid":"PBO:0050343"}


id: PBO:0059772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 46","termid":"PBO:0059772"}


id: GO:0062009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of the secondary palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The secondary palate is the part of the palate formed from the fusion of the two palatine shelves, extensions of the maxillary prominences.","definition_xrefs":["PMID:28784960"],"direct_ancestors":[{"relation_name":"is_a","term_name":"roof of mouth development","termid":"GO:0060021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"secondary palate development","termid":"GO:0062009"}


id: PBO:0086777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum; identified based on homology to <i>Ashbya gossypii</i>","termid":"PBO:0086777"}


id: PBO:0085387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane high glucose sensor that regulates glucose transport; low affinity sesnor that contains 12 predicted transmembrane segments and a long C-terminal tail required for hexose transporter induction; phosphorylation of the tail by Yck1p/Yck2p facilitates binding to the HXT co-repressors, Mth1p and Std1p; RGT2 has a paralog, SNF3, that arose from the whole genome duplication","termid":"PBO:0085387"}


id: PBO:0058283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4659b","termid":"PBO:0058283"}


id: PBO:0058084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4301","termid":"PBO:0058084"}


id: PBO:0079360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha 3f pseudogene","termid":"PBO:0079360"}


id: MONDO:0009859
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Phaver syndrome is a very rare syndrome characterized by the association of limb Pterygia, Heart anomalies, Autosomal recessive inheritance, Vertebral defects, Ear anomalies and Radial defects.","definition_xrefs":["Orphanet:2876"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHAVER syndrome","secondary_identifiers":["MESH:C538357","OMIM:261575","SCTID:723453002","GARD:4465","MEDGEN:376670","UMLS:C1849928"],"synonyms":[{"name":"PHAVER syndrome","type":"exact"},{"name":"Powell-Chandra-Saal syndrome","type":"exact"},{"name":"pterygia heart defects autosomal recessive inheritance vertebral defects Ear anomalies and radial defects","type":"related"}],"termid":"MONDO:0009859","xrefs":{"Monarch":{"xref_id":"0009859"}}}


id: PBO:0003280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome subunit Rrp46 (predicted)","termid":"PBO:0003280"}


id: PBO:0044419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily W member 1","termid":"PBO:0044419"}


id: PATO:0001088
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001088 absolute efficiency value (obsolete PATO:0001088)","termid":"PATO:0001088"}


id: FYPO:0000553
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of pseudohyphal growth is increased during a cellular hyperosmotic response.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased pseudohyphal growth","termid":"FYPO:0003776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased pseudohyphal growth during cellular hyperosmotic response","secondary_identifiers":["FYPO:0000438"],"synonyms":[{"name":"increased filamentous growth during cellular hyperosmotic response","type":"broad"}],"termid":"FYPO:0000553"}


id: PBO:0065747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyrroline-5-carboxylate reductase 2","termid":"PBO:0065747"}


id: FYPO:0003632
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of one gene product (RNA or protein) to a ribonucleoprotein complex is abnormal. The gene product whose binding to the ribonucleoprotein complex is affected may be encoded by the mutated gene, or may be encoded by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein complex binding","termid":"FYPO:0003591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0000702","FYPO:0000652","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"abnormal ribonucleoprotein complex binding","synonyms":[{"name":"abnormal RNP binding","type":"exact"}],"termid":"FYPO:0003632"}


id: MONDO:0004200
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A term used by urologists to describe an infiltrating carcinoma of the bladder that has not invaded into the muscularis propria of the bladder wall regardless of histologic type or grade.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urinary bladder carcinoma","termid":"MONDO:0004986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"superficial urinary bladder carcinoma","secondary_identifiers":["MEDGEN:234371","NCIT:C27474","UMLS:C1336527","DOID:7371","SCTID:425231005"],"synonyms":[{"name":"superficial bladder cancer","type":"exact"},{"name":"superficial bladder carcinoma","type":"exact"},{"name":"superficial urinary bladder cancer","type":"exact"},{"name":"superficial urinary bladder carcinoma","type":"exact"}],"termid":"MONDO:0004200","xrefs":{"Monarch":{"xref_id":"0004200"}}}


id: MONDO:1010834
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Wilson disease that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Wilson disease, non-human animal","termid":"MONDO:1010164"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wilson disease, pig","secondary_identifiers":["OMIA:001071-9823"],"termid":"MONDO:1010834","xrefs":{"Monarch":{"xref_id":"1010834"}}}


id: PBO:0048571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-glutamyl carboxylase","termid":"PBO:0048571"}


id: MONDO:0018514
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any of the forms of epithelial neoplasm of rectum that have a rare incidence.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare epithelial tumor of rectum (obsolete MONDO:0018514)","secondary_identifiers":["Orphanet:423998"],"synonyms":[{"name":"rare epithelial neoplasm of rectum","type":"exact"},{"name":"rare rectal epithelial tumor","type":"exact"}],"termid":"MONDO:0018514","xrefs":{"Monarch":{"xref_id":"0018514"}}}


id: GO:0070660
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Differentiation of new inner ear sensory hair cells to replace those lost or destroyed by injury.","definition_xrefs":["PMID:19381250","GOC:dsf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner ear receptor cell differentiation","termid":"GO:0060113"},{"relation_name":"is_a","term_name":"mechanoreceptor differentiation involved in mechanosensory epithelium regeneration","termid":"GO:0070656"},{"relation_name":"part_of","term_name":"inner ear sensory epithelium regeneration","termid":"GO:0070659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inner ear receptor cell differentiation involved in inner ear sensory epithelium regeneration","termid":"GO:0070660"}


id: PBO:0074641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 33","termid":"PBO:0074641"}


id: SO:1000159
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An intrachromosomal transposition whereby the segment between the first two breaks listed is removed and inserted at the third break; the insertion is in cytologically the same orientation as its flanking segments.","definition_xrefs":["FB:reference_manual"],"direct_ancestors":[{"relation_name":"has_part","term_name":"direct","termid":"SO:0001514"},{"relation_name":"is_a","term_name":"intrachromosomal_transposition","termid":"SO:1000041"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uninverted_intrachromosomal_transposition","synonyms":[{"name":"(Drosophila)eTp","type":"related"},{"name":"uninverted intrachromosomal transposition","type":"exact"}],"termid":"SO:1000159"}


id: MONDO:1012695
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any dwarfism that occurs in cattle due to a mutation in the PRKG2 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"dwarfism, non-human animal","termid":"MONDO:1012971"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dwarfism, PRKG2-related, cattle","secondary_identifiers":["OMIA:001485-9913"],"termid":"MONDO:1012695","xrefs":{"Monarch":{"xref_id":"1012695"}}}


id: PBO:0027499
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_oligomycin","termid":"PBO:0027499"}


id: PBO:0087992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA threonylcarbamoyladenosine dehydratase; required for the ct6A tRNA base modification, where an adenosine at position 37 is modified to form a cyclized active ester with an oxazolone ring; localized to the mitochondrial outer membrane; TCD1 has a paralog, TCD2, that arose from the whole genome duplication","termid":"PBO:0087992"}


