# terms

id: PBO:0028401
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitochondrial_electron_transport,_NADH_to_ubiquinone","termid":"PBO:0028401"}


id: GO:0036496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of translation initiation in response to stress by the dephosphorylation of eIF2 alpha.","definition_xrefs":["GOC:PARL","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein dephosphorylation","termid":"GO:0006470"},{"relation_name":"is_a","term_name":"regulation of cellular component size","termid":"GO:0032535"},{"relation_name":"is_a","term_name":"regulation of translational initiation in response to stress","termid":"GO:0043558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of translational initiation by eIF2 alpha dephosphorylation","termid":"GO:0036496"}


id: PBO:0030623
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_alpha-glucosidase_activity","termid":"PBO:0030623"}


id: PBO:0066930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 232","termid":"PBO:0066930"}


id: MONDO:0030996
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited bleeding disorder, platelet-type","termid":"MONDO:0000009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"bleeding disorder, platelet-type, 24","secondary_identifiers":["OMIM:619271","MEDGEN:1785711","UMLS:C5543280","GARD:18273"],"synonyms":[{"name":"BDPLT24","type":"exact"},{"name":"Glanzmann Thrombasthenia-Like With Macrothrombocytopenia 2","type":"exact"},{"name":"bleeding disorder, platelet-type, 24","type":"exact"},{"name":"bleeding disorder, platelet-type, 24, autosomal dominant","type":"exact"}],"termid":"MONDO:0030996","xrefs":{"Monarch":{"xref_id":"0030996"}}}


id: PBO:0080977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZBTB11 antisense RNA 1","termid":"PBO:0080977"}


id: FYECO:0000041
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which a sugar alcohol was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000041 sugar alcohol added (obsolete FYECO:0000041)","termid":"FYECO:0000041"}


id: PBO:0053024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine aminopeptidase 3","termid":"PBO:0053024"}


id: GO:0047062
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (+-)-trans-acenaphthene-1,2-diol + 2 NADP+ = acenaphthene-1,2-dione + 2 H+ + 2 NADPH.","definition_xrefs":["EC:1.10.1.1","RHEA:22184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on diphenols and related substances as donors, NAD or NADP as acceptor","termid":"GO:0016680"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"trans-acenaphthene-1,2-diol dehydrogenase activity","secondary_identifiers":["MetaCyc:1.10.1.1-RXN","KEGG_REACTION:R04059"],"synonyms":[{"name":"(+-)-trans-acenaphthene-1,2-diol:NADP+ oxidoreductase activity","type":"related"},{"name":"trans-1,2-acenaphthenediol dehydrogenase activity","type":"related"}],"termid":"GO:0047062"}


id: PBO:0047814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box N3","termid":"PBO:0047814"}


id: MONDO:0018878
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Branchiootic syndrome is a rare, genetic multiple congenital anomalies syndrome characterized by second branchial arch anomalies (branchial cysts and fistulae), malformations of the outer, middle and inner ear associated with sensorineural, mixed or conductive hearing loss, and the absence of renal abnormalities. Typical ear findings consist of malformed auricles (e.g. lop or cupped ears), preauricular pits and/or tags, and middle and/or inner ear dysplasias (including cochlear, vestibular and semicircular channel hypoplasia, malformation of the ossicles and of middle ear space).","definition_xrefs":["Orphanet:52429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"branchiootic syndrome","secondary_identifiers":["DOID:0060232","UMLS:C4273131","OMIMPS:602588","MEDGEN:1636666","GARD:10148","MESH:C537104","NANDO:1200675","SCTID:764810000"],"synonyms":[{"name":"BOR","type":"exact"},{"name":"bo syndrome","type":"exact"},{"name":"bor","type":"exact"},{"name":"branchiootic dysplasia","type":"exact"}],"termid":"MONDO:0018878","xrefs":{"Monarch":{"xref_id":"0018878"}}}


id: PBO:0088736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Tma20","termid":"PBO:0088736"}


id: MONDO:0024321
data:
  {"annotated_genes":["SJAG_06383","SJAG_05327","SJAG_02523","SJAG_02804","SJAG_03506","SJAG_04975","SJAG_04165","SJAG_01416","SJAG_03292","SJAG_04119","SJAG_02913","SJAG_05278","SJAG_03066","SJAG_04881","SJAG_00295","SJAG_03115","SJAG_00846","SJAG_03672","SJAG_00068"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86956],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010221"},{"annotations":[87215],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033364"},{"annotations":[88791],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032808"},{"annotations":[88815],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032822"},{"annotations":[86862],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0060627"},{"annotations":[86863],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0040500"},{"annotations":[88327],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0060724"},{"annotations":[88155],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0029140"},{"annotations":[86992],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012465"},{"annotations":[88112],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009398"},{"annotations":[87951],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013882"},{"annotations":[88380],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014318"},{"annotations":[88670],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014457"},{"annotations":[87552],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014780"},{"annotations":[87387],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014832"},{"annotations":[87748],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013563"},{"annotations":[88697],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010466"},{"annotations":[87743],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014165"},{"annotations":[87187],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030037"},{"annotations":[88711],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010438"},{"annotations":[87745],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014166"}]},"cv_name":"mondo","definition":"A disease that has its basis in the disruption of GPI anchor biosynthetic process.","definition_xrefs":["MONDO:patterns/basis_in_disruption_of_process"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of glycosylation","termid":"MONDO:0024322"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00068":null,"SJAG_00295":null,"SJAG_00846":null,"SJAG_01416":null,"SJAG_02523":null,"SJAG_02804":null,"SJAG_02913":null,"SJAG_03066":null,"SJAG_03115":null,"SJAG_03292":null,"SJAG_03506":null,"SJAG_03672":null,"SJAG_04119":null,"SJAG_04165":null,"SJAG_04881":null,"SJAG_04975":null,"SJAG_05278":null,"SJAG_05327":null,"SJAG_06383":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"disorder of GPI anchor biosynthesis","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"GPI anchor biosynthetic process disease","type":"exact"},{"name":"GPIBD","type":"exact"},{"name":"disorder of GPI anchor biosynthetic process","type":"exact"},{"name":"glycosylphosphatidylinositol biosynthesis defect","type":"exact"}],"termid":"MONDO:0024321","terms_by_termid":{"MONDO:0009398":null,"MONDO:0010221":null,"MONDO:0010438":null,"MONDO:0010466":null,"MONDO:0012465":null,"MONDO:0013563":null,"MONDO:0013882":null,"MONDO:0014165":null,"MONDO:0014166":null,"MONDO:0014318":null,"MONDO:0014457":null,"MONDO:0014780":null,"MONDO:0014832":null,"MONDO:0029140":null,"MONDO:0030037":null,"MONDO:0032808":null,"MONDO:0032822":null,"MONDO:0033364":null,"MONDO:0040500":null,"MONDO:0060627":null,"MONDO:0060724":null},"xrefs":{"Monarch":{"xref_id":"0024321"}}}


id: PR:O14338
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ebs1 gene.","definition_xrefs":["UniProtKB:O14338","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized serine-rich protein C2F12.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2F12.03c","synonyms":[{"name":"Spom972h-ebs1","type":"exact"}],"termid":"PR:O14338"}


id: GO:0009991
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an extracellular stimulus.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete response to extracellular stimulus (obsolete GO:0009991)","termid":"GO:0009991"}


id: FYPO:0002632
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A metabolism phenotype observed in the vegetative growth phase of the life cycle in which dTTP biosynthesis is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal dTTP biosynthetic process","termid":"FYPO:0002631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased dTTP biosynthetic process","synonyms":[{"name":"decreased dTTP biosynthesis","type":"exact"},{"name":"decreased dTTP biosynthetic process during mitotic cell cycle","type":"related"},{"name":"decreased dTTP biosynthetic process during vegetative growth","type":"exact"},{"name":"reduced dTTP biosynthetic process","type":"exact"}],"termid":"FYPO:0002632"}


id: FYPO:0003050
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome pairing during meiosis (synapsis) is normal (i.e. indistinguishable from wild type). Synapsis is the process in which the side by side pairing and physical juxtaposition of homologous chromosomes is established and maintained. Pairing may be assayed globally or at one or more specific loci.","definition_xrefs":["PomBase:mah","GO:0007129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal homologous chromosome pairing","synonyms":[{"name":"normal homologous chromosome pairing at meiosis","type":"exact"},{"name":"normal synapsis","type":"exact"}],"termid":"FYPO:0003050"}


id: GO:1904077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of estrogen biosynthetic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24530842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of steroid biosynthetic process","termid":"GO:0010894"},{"relation_name":"is_a","term_name":"negative regulation of hormone biosynthetic process","termid":"GO:0032353"},{"relation_name":"is_a","term_name":"regulation of estrogen biosynthetic process","termid":"GO:1904076"},{"relation_name":"negatively_regulates","term_name":"estrogen biosynthetic process","termid":"GO:0006703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of estrogen biosynthetic process","synonyms":[{"name":"down regulation of estrogen anabolism","type":"exact"},{"name":"down regulation of estrogen biosynthesis","type":"exact"},{"name":"down regulation of estrogen biosynthetic process","type":"exact"},{"name":"down regulation of estrogen formation","type":"exact"},{"name":"down regulation of estrogen synthesis","type":"exact"},{"name":"down regulation of oestrogen biosynthesis","type":"exact"},{"name":"down regulation of oestrogen biosynthetic process","type":"exact"},{"name":"down-regulation of estrogen anabolism","type":"exact"},{"name":"down-regulation of estrogen biosynthesis","type":"exact"},{"name":"down-regulation of estrogen biosynthetic process","type":"exact"},{"name":"down-regulation of estrogen formation","type":"exact"},{"name":"down-regulation of estrogen synthesis","type":"exact"},{"name":"down-regulation of oestrogen biosynthesis","type":"exact"},{"name":"down-regulation of oestrogen biosynthetic process","type":"exact"},{"name":"downregulation of estrogen anabolism","type":"exact"},{"name":"downregulation of estrogen biosynthesis","type":"exact"},{"name":"downregulation of estrogen biosynthetic process","type":"exact"},{"name":"downregulation of estrogen formation","type":"exact"},{"name":"downregulation of estrogen synthesis","type":"exact"},{"name":"downregulation of oestrogen biosynthesis","type":"exact"},{"name":"downregulation of oestrogen biosynthetic process","type":"exact"},{"name":"inhibition of estrogen anabolism","type":"narrow"},{"name":"inhibition of estrogen biosynthesis","type":"narrow"},{"name":"inhibition of estrogen biosynthetic process","type":"narrow"},{"name":"inhibition of estrogen formation","type":"narrow"},{"name":"inhibition of estrogen synthesis","type":"narrow"},{"name":"inhibition of oestrogen biosynthesis","type":"narrow"},{"name":"inhibition of oestrogen biosynthetic process","type":"narrow"},{"name":"negative regulation of estrogen anabolism","type":"exact"},{"name":"negative regulation of estrogen biosynthesis","type":"exact"},{"name":"negative regulation of estrogen formation","type":"exact"},{"name":"negative regulation of estrogen synthesis","type":"exact"},{"name":"negative regulation of oestrogen biosynthesis","type":"exact"},{"name":"negative regulation of oestrogen biosynthetic process","type":"exact"}],"termid":"GO:1904077"}


id: PBO:0027071
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_Rad52_foci_at_telomeres","termid":"PBO:0027071"}


id: GO:0160019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of platelet rolling.","definition_xrefs":["PMID:15738422","GOC:sl","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of heterotypic cell-cell adhesion","termid":"GO:0034115"},{"relation_name":"is_a","term_name":"regulation of platelet rolling","termid":"GO:0160017"},{"relation_name":"negatively_regulates","term_name":"platelet rolling","termid":"GO:0160015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of platelet rolling","termid":"GO:0160019"}


id: MONDO:0700195
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A fibrosarcoma, originally observed in a Plymouth Rock hen, now thought to be an expression of infection by certain viruses of the avian leukosis-sarcoma complex in the family","definition_xrefs":["NCIT:C17466"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chicken fibrosarcoma","termid":"MONDO:0700191"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rous sarcoma","termid":"MONDO:0700195","xrefs":{"Monarch":{"xref_id":"0700195"}}}


id: PBO:0042557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 20","termid":"PBO:0042557"}


id: PBO:0029569
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_small_vegetative_cell_population_(obsolete_FYPO:0002152)","termid":"PBO:0029569"}


id: PBO:0089992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small-subunit processome, UTP-C complex subunit Utp22","termid":"PBO:0089992"}


id: MONDO:0019442
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital toxoplasmosis (obsolete MONDO:0019442)","termid":"MONDO:0019442","xrefs":{"Monarch":{"xref_id":"0019442"}}}


id: FYPO:0002982
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of serine residues in one or more specific proteins, or of specific protein sites, does not occur.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete abolished protein serine phosphorylation during vegetative growth (obsolete FYPO:0002982)","synonyms":[{"name":"abolished peptidyl-serine phosphorylation during vegetative growth","type":"exact"},{"name":"abolished protein serine phosphorylation during mitotic cell cycle","type":"related"},{"name":"protein serine phosphorylation abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0002982"}


id: MONDO:0012039
data:
  {"annotated_genes":["SJAG_00988","SJAG_02562","SJAG_03494"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89111,89112,89113],"is_not":false,"summary":null,"term":"MONDO:0012039"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00988":null,"SJAG_02562":null,"SJAG_03494":null},"genotype_count":0,"is_obsolete":false,"name":"myocardial infarction, susceptibility to","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:608446","UMLS:C1832662","MEDGEN:318680"],"synonyms":[{"name":"myocardial infarction, decreased susceptibility to","type":"exact"},{"name":"myocardial infarction, protection against","type":"related"},{"name":"myocardial infarction, susceptibility to","type":"exact"},{"name":"myocardial infarction, susceptibility to, 1","type":"related"},{"name":"susceptibility to myocardial infarction","type":"related"}],"termid":"MONDO:0012039","terms_by_termid":{"MONDO:0012039":null},"xrefs":{"Monarch":{"xref_id":"0012039"}}}


id: PBO:0053682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 869","termid":"PBO:0053682"}


id: PBO:0084942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Multidrug efflux pump of the major facilitator superfamily; required for resistance to aminotriazole and 4-nitroquinoline-N-oxide; ATR1 has a paralog, YMR279C, that arose from the whole genome duplication; protein abundance increases in response to DNA replication stress","termid":"PBO:0084942"}


id: PR:O42908
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A presequence protease, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11851:SF68","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial presequence protease (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC119.17","secondary_identifiers":["UniProtKB:O42908"],"synonyms":[{"name":"SPBC119.17","type":"related"},{"name":"Spom972h-PITRM1","type":"exact"}],"termid":"PR:O42908"}


id: PBO:0005010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orotidine 5'-phosphate decarboxylase Ura4","termid":"PBO:0005010"}


id: PBO:0077465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 185A pseudogene 1","termid":"PBO:0077465"}


id: PBO:0052972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L3MBTL2 antisense RNA 1","termid":"PBO:0052972"}


id: PBO:0065825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB5 interacting factor","termid":"PBO:0065825"}


id: PBO:0057136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 218-1","termid":"PBO:0057136"}


id: GO:0072348
data:
  {"annotated_genes":["SJAG_02780","SJAG_03497","SJAG_00991","SJAG_04295","SJAG_00835","SJAG_01589","SJAG_00671","SJAG_05213","SJAG_02463","SJAG_04673","SJAG_03577","SJAG_03452","SJAG_03652","SJAG_02962","SJAG_03334","SJAG_02779","SJAG_01660","SJAG_01890","SJAG_04325","SJAG_01941","SJAG_01344"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59995],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035348"},{"annotations":[73529,80968],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905135"},{"annotations":[64660],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903712"},{"annotations":[97341],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098709"},{"annotations":[114991],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160007"},{"annotations":[120074,98865,97889],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071996"},{"annotations":[103182],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990554"},{"annotations":[103183],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990553"},{"annotations":[72234],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990559"},{"annotations":[104429,90081],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990543"},{"annotations":[90229],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990557"},{"annotations":[105458],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990545"},{"annotations":[95144],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905626"},{"annotations":[67105],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902434"},{"annotations":[62502],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902358"},{"annotations":[102497],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140125"},{"annotations":[91959,91958],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071934"}]},"cv_name":"biological_process","definition":"The directed movement of compounds that contain sulfur, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00671":null,"SJAG_00835":null,"SJAG_00991":null,"SJAG_01344":null,"SJAG_01589":null,"SJAG_01660":null,"SJAG_01890":null,"SJAG_01941":null,"SJAG_02463":null,"SJAG_02779":null,"SJAG_02780":null,"SJAG_02962":null,"SJAG_03334":null,"SJAG_03452":null,"SJAG_03497":null,"SJAG_03577":null,"SJAG_03652":null,"SJAG_04295":null,"SJAG_04325":null,"SJAG_04673":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"sulfur compound transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null},"synonyms":[{"name":"sulfur-containing compound transport","type":"exact"}],"termid":"GO:0072348","terms_by_termid":{"GO:0035348":null,"GO:0071934":null,"GO:0071996":null,"GO:0098709":null,"GO:0140125":null,"GO:0160007":null,"GO:1902358":null,"GO:1902434":null,"GO:1903712":null,"GO:1905135":null,"GO:1905626":null,"GO:1990543":null,"GO:1990545":null,"GO:1990553":null,"GO:1990554":null,"GO:1990557":null,"GO:1990559":null}}


id: PBO:0054657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2063","termid":"PBO:0054657"}


id: PBO:0047752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"farnesyltransferase, CAAX box, alpha pseudogene 2","termid":"PBO:0047752"}


id: GO:0014744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of muscle adaptation.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle adaptation","termid":"GO:0043502"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"muscle adaptation","termid":"GO:0043500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of muscle adaptation","synonyms":[{"name":"positive regulation of muscle plasticity","type":"related"}],"termid":"GO:0014744"}


id: MONDO:0011829
data:
  {"annotated_genes":["SJAG_06603"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88238],"is_not":false,"summary":null,"term":"MONDO:0011829"}]},"cv_name":"mondo","definition":"Any coenzyme Q10 deficiency in which the cause of the disease is a mutation in the COQ2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coenzyme Q10 deficiency","termid":"MONDO:0018151"}],"gene_count":1,"genes_by_uniquename":{"SJAG_06603":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066","MONDO:0005244"],"is_obsolete":false,"name":"coenzyme Q10 deficiency, primary, 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3551954","MEDGEN:764868","DOID:0070238","GARD:18378","OMIM:607426"],"synonyms":[{"name":"COQ10D1","type":"related"},{"name":"COQ2 coenzyme Q10 deficiency","type":"exact"},{"name":"CoQ deficiency 1","type":"related"},{"name":"Coq10 deficiency, primary, 1","type":"related"},{"name":"coenzyme Q deficiency 1","type":"related"},{"name":"coenzyme Q10 deficiency caused by mutation in COQ2","type":"exact"},{"name":"coenzyme Q10 deficiency, primary, 1","type":"exact"},{"name":"coenzyme Q10 deficiency, primary, type 1","type":"exact"},{"name":"ubiquinone deficiency 1","type":"related"}],"termid":"MONDO:0011829","terms_by_termid":{"MONDO:0011829":null},"xrefs":{"Monarch":{"xref_id":"0011829"}}}


id: MONDO:0001771
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"urethral stricture","termid":"MONDO:0002127"},{"relation_name":"is_a","term_name":"post-infectious disorder","termid":"MONDO:0021669"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infective urethral stricture","secondary_identifiers":["MEDGEN:588592","ICD9:136.9","ICD9:598.00","ICD9:598.01","SCTID:80375002","UMLS:C0403696","DOID:13658"],"termid":"MONDO:0001771","xrefs":{"Monarch":{"xref_id":"0001771"}}}


id: PBO:0040576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B9 domain containing 1","termid":"PBO:0040576"}


id: PBO:0034188
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-visits","termid":"PBO:0034188"}


id: GO:0042676
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the cone cells of the compound eye, the lens-secreting cells in the ommatidia, adopt pathways of differentiation that lead to the establishment of their distinct cell type.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"compound eye cone cell differentiation","termid":"GO:0042675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"compound eye cone cell fate commitment","secondary_identifiers":["GO:0007466"],"termid":"GO:0042676"}


id: FYPO:0002815
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell surface is abolished. The cell surface refers to the external part of the cell wall and/or plasma membrane.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization during vegetative growth","termid":"FYPO:0001179"},{"relation_name":"is_a","term_name":"abnormal protein localization to cell surface","termid":"FYPO:0002814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to cell surface","synonyms":[{"name":"abolished protein localisation to cell surface","type":"exact"},{"name":"abolished protein localization to cell surface during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to cell surface during vegetative growth","type":"exact"},{"name":"protein localization to cell surface abolished","type":"exact"}],"termid":"FYPO:0002815"}


id: PBO:0068176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 483","termid":"PBO:0068176"}


id: PR:Q10341
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cys2 gene.","definition_xrefs":["UniProtKB:Q10341","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine-O-acetyltransferase cys2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC106.17c","synonyms":[{"name":"Spom972h-cys2","type":"exact"}],"termid":"PR:Q10341"}


id: PBO:0053090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late cornified envelope 2B","termid":"PBO:0053090"}


id: PBO:0063175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phenazine biosynthesis like protein domain containing","termid":"PBO:0063175"}


id: PBO:0052684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 52","termid":"PBO:0052684"}


id: PBO:0057833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3150b","termid":"PBO:0057833"}


id: MONDO:0016861
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Alagille syndrome","termid":"MONDO:0007318"},{"relation_name":"is_a","term_name":"partial monosomy of the short arm of chromosome 20","termid":"MONDO:0016898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004335","MONDO:0005267","MONDO:0002515"],"is_obsolete":false,"name":"Alagille syndrome due to 20p12 microdeletion","secondary_identifiers":["UMLS:C5679679","Orphanet:261600","GARD:17250","MEDGEN:1826025"],"synonyms":[{"name":"Alagille syndrome due to del(20)(p12)","type":"exact"},{"name":"Alagille syndrome due to monosomy 20p12","type":"exact"},{"name":"Alagille-Watson syndrome due to monosomy 20p12","type":"exact"},{"name":"Arteriohepatic dysplasia due to monosomy 20p12","type":"exact"},{"name":"syndromic bile duct paucity due to monosomy 20p12","type":"exact"}],"termid":"MONDO:0016861","xrefs":{"Monarch":{"xref_id":"0016861"}}}


id: MONDO:0013411
data:
  {"annotated_genes":["SJAG_04567","SJAG_03815","SJAG_02919"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88716,88717,88718],"is_not":false,"summary":null,"term":"MONDO:0013411"}]},"cv_name":"mondo","definition":"Any early-onset non-syndromic cataract in which the cause of the disease is a mutation in the CRYAB gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset zonular cataract","termid":"MONDO:0020379"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02919":null,"SJAG_03815":null,"SJAG_04567":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 16 multiple types","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C565134","MEDGEN:814707","OMIM:613763","DOID:0110250","UMLS:C3808377"],"synonyms":[{"name":"CRYAB early-onset non-syndromic cataract","type":"exact"},{"name":"CTPP2","type":"narrow"},{"name":"CTRCT16","type":"exact"},{"name":"cataract 16, multiple types","type":"related"},{"name":"cataract, congenital lamellar","type":"related"},{"name":"cataract, posterior polar, 2","type":"related"},{"name":"early-onset non-syndromic cataract caused by mutation in CRYAB","type":"exact"},{"name":"posterior polar cataract 2","type":"narrow"}],"termid":"MONDO:0013411","terms_by_termid":{"MONDO:0013411":null},"xrefs":{"Monarch":{"xref_id":"0013411"}}}


id: PBO:0043797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic polyadenylated homeobox like 2","termid":"PBO:0043797"}


id: MONDO:0006047
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from glandular epithelial cells of the pancreas","direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"},{"relation_name":"is_a","term_name":"exocrine pancreatic carcinoma","termid":"MONDO:0005192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"pancreatic adenocarcinoma","secondary_identifiers":["SCTID:700423003","NCIT:C8294","DOID:4074","EFO:1000044","ONCOTREE:PAAD","UMLS:C0281361","MEDGEN:83800"],"synonyms":[{"name":"PAAD","type":"related"},{"name":"adenocarcinoma - pancreas","type":"exact"},{"name":"adenocarcinoma of pancreas","type":"exact"},{"name":"adenocarcinoma of the pancreas","type":"exact"},{"name":"pancreas adenocarcinoma","type":"exact"},{"name":"pancreatic adenocarcinoma","type":"exact"}],"termid":"MONDO:0006047","xrefs":{"Monarch":{"xref_id":"0006047"}}}


id: PBO:0041042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRCA1/BRCA2-containing complex subunit 3","termid":"PBO:0041042"}


id: PBO:0034794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent helicase Slh1, human ASCC3 ortholog (predicted)","termid":"PBO:0034794"}


id: PBO:0045772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extracellular matrix protein 2","termid":"PBO:0045772"}


id: GO:0043960
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-erythro-3-methylmalyl-CoA = mesaconyl-CoA + H2O.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"L-erythro-3-methylmalyl-CoA dehydratase activity","termid":"GO:0043960"}


id: MONDO:0958083
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conjoined twins","secondary_identifiers":["UMLS:C0041428","icd11.foundation:1550169484","ICD10CM:Q89.4","MEDGEN:52901","Orphanet:647916"],"termid":"MONDO:0958083","xrefs":{"Monarch":{"xref_id":"0958083"}}}


id: PBO:0076907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transferrin","termid":"PBO:0076907"}


id: FYPO:0005147
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a proteasome to the nuclear periphery is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to nucleus during vegetative growth","termid":"FYPO:0001424"},{"relation_name":"is_a","term_name":"abnormal protein localization to nuclear periphery","termid":"FYPO:0002338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abolished proteasome localization to nuclear periphery","synonyms":[{"name":"abolished proteasome localisation to nuclear periphery","type":"exact"},{"name":"abolished proteasome localization to nuclear periphery during mitotic cell cycle","type":"related"},{"name":"abolished proteasome localization to nuclear periphery during vegetative growth","type":"exact"},{"name":"proteasome localization to nuclear periphery abolished","type":"exact"}],"termid":"FYPO:0005147"}


id: PBO:0017616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med6","termid":"PBO:0017616"}


id: PBO:0053054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LINC00240 antisense RNA regulating promoter methylation","termid":"PBO:0053054"}


id: PBO:0076151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinyl-CoA:glutarate-CoA transferase","termid":"PBO:0076151"}


id: MONDO:0010357
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MRX78 (obsolete MONDO:0010357)","secondary_identifiers":["OMIM:300551"],"termid":"MONDO:0010357","xrefs":{"Monarch":{"xref_id":"0010357"}}}


id: GO:0015477
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A porin of the bacterial outer membrane that forms transmembrane pores and transports relatively large molecules from the external milieu to the periplasm in an energized process. Energizing of transport across the outer membrane requires a heterotrimeric complex of proteins, the TonB-ExbB-ExbD complex, or in some cases, the TolA-TolQ-TolR complex. Energizing requires proton motive force across the cytoplasmic membrane.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729","TC:1.B.13.-.-"],"gene_count":0,"genotype_count":0,"name":"obsolete receptor porin activity (obsolete GO:0015477)","synonyms":[{"name":"receptor porin activity","type":"exact"}],"termid":"GO:0015477"}


id: MONDO:0007535
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"pulmonary emphysema","termid":"MONDO:0004849"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"emphysema, hereditary pulmonary","secondary_identifiers":["OMIM:130700","MEDGEN:338765","UMLS:C1851718","MESH:C565057"],"synonyms":[{"name":"emphysema, hereditary pulmonary","type":"exact"}],"termid":"MONDO:0007535","xrefs":{"Monarch":{"xref_id":"0007535"}}}


id: PR:O94565
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- omh4 gene.","definition_xrefs":["UniProtKB:O94565","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-glycoside alpha-1,2-mannosyltransferase homolog 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1773.08c","synonyms":[{"name":"Spom972h-omh4","type":"exact"}],"termid":"PR:O94565"}


id: FYPO:0007959
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of mitotic spindle elongation is increased during miotic prophase.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased rate of mitotic spindle elongation","termid":"FYPO:0007958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0000337","FYPO:0001320","FYPO:0005447","FYPO:0000054","FYPO:0001985","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"increased rate of mitotic spindle elongation during prophase","termid":"FYPO:0007959"}


id: MONDO:0800478
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by an uncommon and relatively unknown cause of facial ulceration that occurs after damage to the trigeminal nerve. It characteristically involves non-healing facial ulceration(s) with accompanying anesthesia, paresthesia, and dysesthesia along the distribution of a trigeminal dermatome.","definition_xrefs":["PMID:37089852"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trigeminal trophic syndrome","secondary_identifiers":["UMLS:C1274928","Orphanet:664901","MEDGEN:698241","icd11.foundation:983392135"],"synonyms":[{"name":"TTS","type":"exact"}],"termid":"MONDO:0800478","xrefs":{"Monarch":{"xref_id":"0800478"}}}


id: PBO:0051426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-4 (pseudogene)","termid":"PBO:0051426"}


id: GO:0075169
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism activates, maintains or increases the frequency, rate or extent of its protein kinase-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of symbiont protein kinase-mediated signal transduction in response to host (obsolete GO:0075169)","termid":"GO:0075169"}


id: PBO:0005629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination protein (predicted)","termid":"PBO:0005629"}


id: PBO:0000316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tuberin","termid":"PBO:0000316"}


id: PBO:0065609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTP4A1 pseudogene 3","termid":"PBO:0065609"}


id: PBO:0055692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"limb and CNS expressed 1","termid":"PBO:0055692"}


id: GO:0032724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of fractalkine production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fractalkine production","termid":"GO:0032644"},{"relation_name":"is_a","term_name":"positive regulation of chemokine production","termid":"GO:0032722"},{"relation_name":"positively_regulates","term_name":"fractalkine production","termid":"GO:0032603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of fractalkine production","synonyms":[{"name":"activation of fractalkine production","type":"narrow"},{"name":"stimulation of fractalkine production","type":"narrow"},{"name":"up regulation of fractalkine production","type":"exact"},{"name":"up-regulation of fractalkine production","type":"exact"},{"name":"upregulation of fractalkine production","type":"exact"}],"termid":"GO:0032724"}


id: PBO:0059092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MORC family CW-type zinc finger 4","termid":"PBO:0059092"}


id: GO:0060629
data:
  {"annotated_genes":["SJAG_04457","SJAG_02104","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95699,112033],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090006"},{"annotations":[104212],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062123"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of homologous chromosome segregation, the cell cycle process in which replicated homologous chromosomes are organized and then physically separated and apportioned to two sets during the first division of the meiotic cell cycle. Each replicated chromosome, composed of two sister chromatids, aligns at the cell equator, paired with its homologous partner; this pairing off, referred to as synapsis, permits genetic recombination. One homolog (both sister chromatids) of each morphologic type goes into each of the resulting chromosome sets.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chromosome segregation","termid":"GO:0051983"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"homologous chromosome segregation","termid":"GO:0045143"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02104":null,"SJAG_03048":null,"SJAG_04457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of homologous chromosome segregation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0060629","terms_by_termid":{"GO:0062123":null,"GO:0090006":null}}


id: PBO:0043143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 11","termid":"PBO:0043143"}


id: MONDO:0001655
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pathologic nystagmus","termid":"MONDO:0004843"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dissociated nystagmus","secondary_identifiers":["icd11.foundation:50035755","SCTID:9520006","UMLS:C0155380","ICD10CM:H55.04","DOID:13174","MEDGEN:56362","ICD9:379.55"],"synonyms":[{"name":"dissociated nystagmus","type":"exact"}],"termid":"MONDO:0001655","xrefs":{"Monarch":{"xref_id":"0001655"}}}


id: PBO:0016963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein New11","termid":"PBO:0016963"}


id: PBO:0053968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1278","termid":"PBO:0053968"}


id: GO:0045305
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Functions to either promote or inhibit the establishment of competence for transformation.","definition_xrefs":["GOC:mlg"],"gene_count":0,"genotype_count":0,"name":"obsolete regulator of establishment of competence for transformation activity (obsolete GO:0045305)","synonyms":[{"name":"regulator of establishment of competence for transformation activity","type":"exact"}],"termid":"GO:0045305"}


id: PBO:0061062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NKAIN1 pseudogene 2","termid":"PBO:0061062"}


id: PBO:0111839
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin Kar3 subfamily","termid":"PBO:0111839"}


id: PBO:0004513
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.3.1.16","termid":"PBO:0004513"}


id: PBO:0012006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fusion cytochrome c oxidase assembly protein Cox1102, mitochondrial ribosomal protein Rsm2202, fusion protein (predicted)","termid":"PBO:0012006"}


id: PBO:0060090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 37","termid":"PBO:0060090"}


id: GO:0019509
data:
  {"annotated_genes":["SJAG_00309","SJAG_01404","SJAG_02689","SJAG_03881","SJAG_03614","SJAG_02293"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59182,78629,79552,80103,80962,82046],"is_not":false,"summary":null,"term":"GO:0019509"}]},"cv_name":"biological_process","definition":"The generation of L-methionine (2-amino-4-(methylthio)butanoic acid) from methylthioadenosine.","definition_xrefs":["PMID:19946895","MetaCyc:PWY-4361","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-methionine salvage","termid":"GO:0071267"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00309":null,"SJAG_01404":null,"SJAG_02293":null,"SJAG_02689":null,"SJAG_03614":null,"SJAG_03881":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006790","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"L-methionine salvage from methylthioadenosine","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null},"secondary_identifiers":["Reactome:R-HSA-1237112","MetaCyc:PWY-6754","MetaCyc:PWY-6753","MetaCyc:PWY-6756"],"synonyms":[{"name":"methionine recycling","type":"narrow"},{"name":"methionine regeneration","type":"narrow"},{"name":"methionine salvage from methylthioadenosine","type":"exact"},{"name":"methionine salvage pathway","type":"exact"}],"termid":"GO:0019509","terms_by_termid":{"GO:0019509":null}}


id: PBO:0060142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial poly(A) polymerase","termid":"PBO:0060142"}


id: PBO:0027015
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_positive_regulation_of_protein_kinase_activity","termid":"PBO:0027015"}


id: GO:0097273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any biological process involved in the maintenance of an internal steady state of creatinine.","definition_xrefs":["PMID:12695560","GOC:yaf"],"gene_count":0,"genotype_count":0,"name":"obsolete creatinine homeostasis (obsolete GO:0097273)","termid":"GO:0097273"}


id: PBO:0029182
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_trehalose_6-phosphate_level_during_heat_shock","termid":"PBO:0029182"}


id: GO:0009844
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The physiological and developmental changes by a seed, spore, pollen grain (microspore), or zygote that occur after release from dormancy, and encompassing events prior to and including the first visible indications of growth.","definition_xrefs":["GOC:lr"],"gene_count":0,"genotype_count":0,"name":"obsolete germination (obsolete GO:0009844)","synonyms":[{"name":"germination","type":"exact"}],"termid":"GO:0009844"}


id: PBO:0071759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P1 pseudogene 6","termid":"PBO:0071759"}


id: PBO:0041524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 16 open reading frame 82","termid":"PBO:0041524"}


id: PBO:0041369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C4orf46 pseudogene 1","termid":"PBO:0041369"}


id: PBO:0030228
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_tacrolimus","termid":"PBO:0030228"}


id: PBO:0088091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-glycosyltransferase subunit of the GPI-GnT complex; UDP-GlcNAc-binding and catalytic subunit of the enzyme that mediates the first step in glycosylphosphatidylinositol (GPI) biosynthesis, mutations cause defects in transcription and in biogenesis of cell wall proteins","termid":"PBO:0088091"}


id: PBO:0049014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPM6A divergent transcript","termid":"PBO:0049014"}


id: GO:0061509
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a protein is transported to, or maintained to the old mitotic spindle pole body resulting in its being distributed asymmetrically.","definition_xrefs":["GOC:vw","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete asymmetric protein localization to old mitotic spindle pole body (obsolete GO:0061509)","termid":"GO:0061509"}


id: PR:Q1RKN3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tlh2 gene.","definition_xrefs":["UniProtKB:Q1RKN3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase tlh2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBCPT2R1.08c","synonyms":[{"name":"Spom972h-tlh2","type":"exact"},{"name":"Sub-telomeric helicase RecQ homolog 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q1RKN3"}


id: PBO:0036387
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by Rhodotorula minuta DPS1","termid":"PBO:0036387"}


id: PBO:0049197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Grid2 interacting protein","termid":"PBO:0049197"}


id: GO:0005692
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribonucleoprotein complex that contains small nuclear RNA U11, a heptameric ring of Sm proteins, as well as several proteins that are unique to the U11 snRNP, most of which remain associated with the U11 snRNA both while the U11 snRNP is free or assembled into a series of spliceosomal complexes.","definition_xrefs":["ISBN:0879695897","GOC:krc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal snRNP complex","termid":"GO:0097525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"U11 snRNP","synonyms":[{"name":"12S U11 snRNP","type":"narrow"},{"name":"snRNP U11","type":"exact"}],"termid":"GO:0005692"}


id: MONDO:0045072
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Abnormal secretion of hormones in conjunction with neoplastic growth occurring anywhere in the body.","definition_xrefs":["NCIT:C4065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplastic syndrome","termid":"MONDO:0021058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectopic hormone secretion syndrome associated with neoplasia","secondary_identifiers":["MEDGEN:208863","UMLS:C0851689"],"synonyms":[{"name":"ectopic hormone secretion syndrome associated with neoplasia","type":"exact"},{"name":"neoplasm associated ectopic hormone secretion syndrome","type":"exact"}],"termid":"MONDO:0045072","xrefs":{"Monarch":{"xref_id":"0045072"}}}


id: GO:0000271
data:
  {"annotated_genes":["SJAG_04771","SJAG_04666","SJAG_04184","SJAG_00218","SJAG_00876","SJAG_03057","SJAG_03123","SJAG_00183","SJAG_05285","SJAG_00963","SJAG_04483","SJAG_03705","SJAG_01835","SJAG_01288","SJAG_01963","SJAG_01255","SJAG_04236","SJAG_04659","SJAG_02278","SJAG_02446","SJAG_04462","SJAG_00424","SJAG_02916","SJAG_01453","SJAG_03587","SJAG_04073","SJAG_01787","SJAG_01376","SJAG_02590","SJAG_02222","SJAG_04668","SJAG_01290","SJAG_04509","SJAG_00610","SJAG_01426","SJAG_01028","SJAG_04878"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[64310,78547,76920],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006078"},{"annotations":[97068,81205,95146,102440],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051072"},{"annotations":[96278],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[74739],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034412"},{"annotations":[72372,73157,75095,75267,80516],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070600"},{"annotations":[72800,74742,117681,93414,107935,77603,76257,115022],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071970"},{"annotations":[79965,104464],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070880"},{"annotations":[78840,80766],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045719"},{"annotations":[89326,94234],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140748"},{"annotations":[89710],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032951"},{"annotations":[107745,119904,94218,107174,92583,119771,69409],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090334"},{"annotations":[91254,94240,104671,96756],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a polysaccharide, a polymer of many (typically more than 10) monosaccharide residues linked glycosidically.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide metabolic process","termid":"GO:0005976"},{"relation_name":"is_a","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"},{"relation_name":"is_a","term_name":"carbohydrate biosynthetic process","termid":"GO:0016051"}],"gene_count":37,"genes_by_uniquename":{"SJAG_00183":null,"SJAG_00218":null,"SJAG_00424":null,"SJAG_00610":null,"SJAG_00876":null,"SJAG_00963":null,"SJAG_01028":null,"SJAG_01255":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01376":null,"SJAG_01426":null,"SJAG_01453":null,"SJAG_01787":null,"SJAG_01835":null,"SJAG_01963":null,"SJAG_02222":null,"SJAG_02278":null,"SJAG_02446":null,"SJAG_02590":null,"SJAG_02916":null,"SJAG_03057":null,"SJAG_03123":null,"SJAG_03587":null,"SJAG_03705":null,"SJAG_04073":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04462":null,"SJAG_04483":null,"SJAG_04509":null,"SJAG_04659":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null,"SJAG_04878":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"polysaccharide biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"glycan biosynthesis","type":"exact"},{"name":"glycan biosynthetic process","type":"exact"},{"name":"polysaccharide anabolism","type":"exact"},{"name":"polysaccharide biosynthesis","type":"exact"},{"name":"polysaccharide formation","type":"exact"},{"name":"polysaccharide synthesis","type":"exact"}],"termid":"GO:0000271","terms_by_termid":{"GO:0006078":null,"GO:0032951":null,"GO:0034412":null,"GO:0034413":null,"GO:0045719":null,"GO:0051072":null,"GO:0070600":null,"GO:0070610":null,"GO:0070880":null,"GO:0071970":null,"GO:0090334":null,"GO:0140748":null}}


id: PBO:0001136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7-like Rlp7 involved in ribosome biogenesis (predicted)","termid":"PBO:0001136"}


id: GO:0007235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of Ypd1 protein (obsolete GO:0007235)","synonyms":[{"name":"activation of Ypd1 protein","type":"exact"}],"termid":"GO:0007235"}


id: MONDO:0020786
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete short sleep, familial natural, 2 (obsolete MONDO:0020786)","secondary_identifiers":["OMIM:618591"],"synonyms":[{"name":"FNSS2","type":"related"},{"name":"SHORT SLEEP, FAMILIAL NATURAL, 2","type":"related"},{"name":"short sleep, familial natural, 2","type":"exact"}],"termid":"MONDO:0020786","xrefs":{"Monarch":{"xref_id":"0020786"}}}


id: GO:2000419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of eosinophil extravasation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular extravasation","termid":"GO:0002691"},{"relation_name":"is_a","term_name":"regulation of eosinophil migration","termid":"GO:2000416"},{"relation_name":"regulates","term_name":"eosinophil extravasation","termid":"GO:0072682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of eosinophil extravasation","termid":"GO:2000419"}


id: MONDO:0014962
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive non-syndromic intellectual disability in which the cause of the disease is a mutation in the MBOAT7 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792","MONDO:0006025"],"is_obsolete":false,"name":"intellectual disability, autosomal recessive 57","secondary_identifiers":["GARD:22575","DOID:0081219","MEDGEN:934640","OMIM:617188","UMLS:C4310673"],"synonyms":[{"name":"MBOAT7 autosomal recessive non-syndromic intellectual disability","type":"exact"},{"name":"MRT57","type":"exact"},{"name":"autosomal recessive non-syndromic intellectual disability caused by mutation in MBOAT7","type":"exact"},{"name":"intellectual developmental disorder, autosomal recessive 57","type":"exact"},{"name":"intellectual disability, autosomal recessive 57","type":"exact"},{"name":"intellectual disability, autosomal recessive type 57","type":"exact"},{"name":"mental retardation, autosomal recessive 57","type":"exact"},{"name":"mental retardation, autosomal recessive type 57","type":"exact"}],"termid":"MONDO:0014962","xrefs":{"Monarch":{"xref_id":"0014962"}}}


id: GO:1905944
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of formation of growth cone in injured axon.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:19737525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of sprouting of injured axon","termid":"GO:0048687"},{"relation_name":"is_a","term_name":"regulation of formation of growth cone in injured axon","termid":"GO:1905942"},{"relation_name":"positively_regulates","term_name":"formation of growth cone in injured axon","termid":"GO:0048689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of formation of growth cone in injured axon","synonyms":[{"name":"activation of formation of growth cone in injured axon","type":"narrow"},{"name":"up regulation of formation of growth cone in injured axon","type":"exact"},{"name":"up-regulation of formation of growth cone in injured axon","type":"exact"},{"name":"upregulation of formation of growth cone in injured axon","type":"exact"}],"termid":"GO:1905944"}


id: GO:0008143
data:
  {"annotated_genes":["SJAG_03214","SJAG_01910","SJAG_00425","SJAG_03283","SJAG_02808","SJAG_04601","SJAG_01222","SJAG_01650","SJAG_03747","SJAG_04427","SJAG_04271","SJAG_03448"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71980,72345,74756,76366,77920,79451,80586,90898,91263,91305,98926,99362],"is_not":false,"summary":null,"term":"GO:0008143"}]},"cv_name":"molecular_function","definition":"Binding to a sequence of adenylyl residues in an RNA molecule, such as the poly(A) tail, a sequence of adenylyl residues at the 3' end of eukaryotic mRNA.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poly-purine tract binding","termid":"GO:0070717"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00425":null,"SJAG_01222":null,"SJAG_01650":null,"SJAG_01910":null,"SJAG_02808":null,"SJAG_03214":null,"SJAG_03283":null,"SJAG_03448":null,"SJAG_03747":null,"SJAG_04271":null,"SJAG_04427":null,"SJAG_04601":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003723","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"poly(A) binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"poly(A) binding, within an RNA molecule","type":"exact"},{"name":"poly(rA) binding","type":"exact"},{"name":"poly-A binding","type":"exact"},{"name":"polyadenylate binding","type":"exact"}],"termid":"GO:0008143","terms_by_termid":{"GO:0008143":null}}


id: MONDO:0004867
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the upper respiratory tract.","direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"upper respiratory tract disorder","secondary_identifiers":["UMLS:C0264221","ICD9:478.19","MEDGEN:538406","DOID:974","ICD9:478.9","ICD9:478.1","SCTID:201060008"],"synonyms":[{"name":"disease of upper respiratory tract","type":"exact"},{"name":"disease or disorder of upper respiratory tract","type":"exact"},{"name":"disorder of upper respiratory tract","type":"exact"},{"name":"upper respiratory tract disease","type":"exact"},{"name":"upper respiratory tract disease or disorder","type":"exact"}],"termid":"MONDO:0004867","xrefs":{"Monarch":{"xref_id":"0004867"}}}


id: MONDO:0019971
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"soft tissue neoplasm","termid":"MONDO:0006424"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanoma of soft tissue","secondary_identifiers":["GARD:19367","Orphanet:97338"],"synonyms":[{"name":"clear cell sarcoma of the tendons and aponeuroses","type":"exact"}],"termid":"MONDO:0019971","xrefs":{"Monarch":{"xref_id":"0019971"}}}


id: PBO:0031441
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mislocalized_protein_during_vegetative_growth","termid":"PBO:0031441"}


id: PBO:0089857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone lysine H3-K36 methyltransferase Set2","termid":"PBO:0089857"}


id: FYPO:0000888
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 in centromere outer repeat regions occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K9 dimethylation at centromere during vegetative growth","termid":"FYPO:0000877"},{"relation_name":"is_a","term_name":"abnormal histone H3-K9 dimethylation at centromere outer repeat during vegetative growth","termid":"FYPO:0000886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0002274","FYPO:0001985"],"is_obsolete":false,"name":"decreased histone H3-K9 dimethylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"decreased histone H3 K9 dimethylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at centromere otr during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"decreased histone H3-K9 dimethylation at centromeric outer repeat region during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at pericentric region during vegetative growth","type":"related"},{"name":"decreased histone H3-K9 dimethylation at pericentromeric region during vegetative growth","type":"related"},{"name":"decreased histone H3K9 dimethylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"decreased histone H3K9me2 at centromere outer repeat during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K9 dimethylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 dimethylation at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0000888"}


id: FYPO:0001397
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which actin cortical patches are localized to only the old end of a cell following cell division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monopolar actin cortical patch localization during vegetative growth","termid":"FYPO:0001019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0004803","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"monopolar actin cortical patch localization to old end","synonyms":[{"name":"decreased actin cortical patch localization at non-growing end","type":"related"},{"name":"monopolar F-actin patch localization to old end","type":"exact"},{"name":"monopolar actin cortical patch localisation to old end","type":"exact"},{"name":"monopolar actin cortical patch localization to old end during mitotic cell cycle","type":"related"},{"name":"monopolar actin cortical patch localization to old end during vegetative growth","type":"exact"},{"name":"monopolar actin cortical patch location at old end","type":"related"},{"name":"monopolar actin patch localization to old end","type":"exact"},{"name":"reduced actin patch localization to non-growing cell end","type":"related"}],"termid":"FYPO:0001397"}


id: GO:1900680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ferricrocin biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ferricrocin biosynthetic process","termid":"GO:1900678"},{"relation_name":"is_a","term_name":"positive regulation of ferrichrome biosynthetic process","termid":"GO:1905570"},{"relation_name":"positively_regulates","term_name":"ferricrocin biosynthetic process","termid":"GO:0031171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"positive regulation of ferricrocin biosynthetic process","synonyms":[{"name":"activation of ferricrocin anabolism","type":"exact"},{"name":"activation of ferricrocin biosynthesis","type":"exact"},{"name":"activation of ferricrocin biosynthetic process","type":"narrow"},{"name":"activation of ferricrocin biosynthetic process, peptide formation","type":"narrow"},{"name":"activation of ferricrocin biosynthetic process, peptide modification","type":"narrow"},{"name":"activation of ferricrocin formation","type":"exact"},{"name":"activation of ferricrocin synthesis","type":"exact"},{"name":"positive regulation of ferricrocin anabolism","type":"exact"},{"name":"positive regulation of ferricrocin biosynthesis","type":"exact"},{"name":"positive regulation of ferricrocin biosynthetic process, peptide formation","type":"narrow"},{"name":"positive regulation of ferricrocin biosynthetic process, peptide modification","type":"narrow"},{"name":"positive regulation of ferricrocin formation","type":"exact"},{"name":"positive regulation of ferricrocin synthesis","type":"exact"},{"name":"up regulation of ferricrocin anabolism","type":"exact"},{"name":"up regulation of ferricrocin biosynthesis","type":"exact"},{"name":"up regulation of ferricrocin biosynthetic process","type":"exact"},{"name":"up regulation of ferricrocin biosynthetic process, peptide formation","type":"narrow"},{"name":"up regulation of ferricrocin biosynthetic process, peptide modification","type":"narrow"},{"name":"up regulation of ferricrocin formation","type":"exact"},{"name":"up regulation of ferricrocin synthesis","type":"exact"},{"name":"up-regulation of ferricrocin anabolism","type":"exact"},{"name":"up-regulation of ferricrocin biosynthesis","type":"exact"},{"name":"up-regulation of ferricrocin biosynthetic process","type":"exact"},{"name":"up-regulation of ferricrocin biosynthetic process, peptide formation","type":"narrow"},{"name":"up-regulation of ferricrocin biosynthetic process, peptide modification","type":"narrow"},{"name":"up-regulation of ferricrocin formation","type":"exact"},{"name":"up-regulation of ferricrocin synthesis","type":"exact"},{"name":"upregulation of ferricrocin anabolism","type":"exact"},{"name":"upregulation of ferricrocin biosynthesis","type":"exact"},{"name":"upregulation of ferricrocin biosynthetic process","type":"exact"},{"name":"upregulation of ferricrocin biosynthetic process, peptide formation","type":"narrow"},{"name":"upregulation of ferricrocin biosynthetic process, peptide modification","type":"narrow"},{"name":"upregulation of ferricrocin formation","type":"exact"},{"name":"upregulation of ferricrocin synthesis","type":"exact"}],"termid":"GO:1900680"}


id: PATO:0000973
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A permeability quality inhering in a bearer by virtue of the bearer's disposition to admit the passage of gas or liquid through pores or interstices.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"permeability","termid":"PATO:0000970"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"porosity","termid":"PATO:0000973"}


id: PBO:0073250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 3","termid":"PBO:0073250"}


id: GO:0043559
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to insulin, a polypeptide hormone produced by the islets of Langerhans of the pancreas in mammals, and by the homologous organs of other organisms.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"},{"relation_name":"is_a","term_name":"peptide hormone binding","termid":"GO:0017046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"insulin binding","termid":"GO:0043559"}


id: PBO:0120008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 67, pseudogene","termid":"PBO:0120008"}


id: GO:0097663
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An SCF ubiquitin ligase complex in which the F-box protein is Dia2 in S. cerevisiae (Pof3 in S. pombe).","definition_xrefs":["GOC:vw","GOC:jd","PMID:15147268","PMID:14747994"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SCF ubiquitin ligase complex","termid":"GO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"SCF-Dia2/Pof3 ubiquitin ligase complex","termid":"GO:0097663"}


id: PBO:0029937
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mixed_population_including_germinated_spores_with_elongated_germ_tubes_and_elongated_cells_(obsolete_FYPO:0002300)","termid":"PBO:0029937"}


id: PBO:0053434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 379","termid":"PBO:0053434"}


id: PBO:0054674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2080","termid":"PBO:0054674"}


id: GO:0009602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus from a symbiont (an organism living in close physical association with an organism of a different species) is received and converted into a molecular signal. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198506732","GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to symbiont","termid":"GO:0009608"},{"relation_name":"is_a","term_name":"biological process involved in interaction with symbiont","termid":"GO:0051702"},{"relation_name":"is_a","term_name":"detection of other organism","termid":"GO:0098543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of symbiont","secondary_identifiers":["GO:0051855"],"synonyms":[{"name":"perception of symbiont","type":"related"},{"name":"recognition of symbiont","type":"exact"}],"termid":"GO:0009602"}


id: PBO:0114857
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"there is a gene with the systematic identifier SPBC3B8.10 (ina17)","termid":"PBO:0114857"}


id: MONDO:1010707
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Porphyria cutanea tarda that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyria cutanea tarda, non-human animal","termid":"MONDO:1010102"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"porphyria cutanea tarda, sheep","secondary_identifiers":["OMIA:001176-9940"],"termid":"MONDO:1010707","xrefs":{"Monarch":{"xref_id":"1010707"}}}


id: PBO:0060214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mevalonate kinase","termid":"PBO:0060214"}


id: PBO:0054776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2189","termid":"PBO:0054776"}


id: PATO:0002083
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Having extra or fewer parts.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"has number of","termid":"PATO:0001555"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"altered number of","termid":"PATO:0002083"}


id: SO:0000429
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The U3 segment of the three-prime long terminal repeat.","direct_ancestors":[{"relation_name":"is_a","term_name":"U3_LTR_region","termid":"SO:0000424"},{"relation_name":"is_a","term_name":"five_prime_LTR_component","termid":"SO:0000850"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3_five_prime_LTR_region","synonyms":[{"name":"U3 5' long term repeat region","type":"exact"},{"name":"U3 five prime LTR region","type":"exact"}],"termid":"SO:0000429"}


id: MOD:00932
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label","definition_xrefs":["Unimod:499","PubMed:11821862"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"IDBEST tag for quantitation","synonyms":[{"name":"Heavy IDBEST tag for quantitation","type":"related"},{"name":"IGBP:13C(2)","type":"related"}],"termid":"MOD:00932"}


id: PBO:0068114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 421","termid":"PBO:0068114"}


id: PBO:0082385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta 5 subunit of the 20S proteasome; responsible for the chymotryptic activity of the proteasome","termid":"PBO:0082385"}


id: MONDO:1011936
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arthritis deformans, non-human animal","secondary_identifiers":["OMIA:000065"],"termid":"MONDO:1011936","xrefs":{"Monarch":{"xref_id":"1011936"}}}


id: GO:0033830
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetylglucosamine + Skp1-protein-hydroxyproline = UDP + Skp1-protein-O-(N-acetyl-D-glucosaminyl)hydroxyproline.","definition_xrefs":["EC:2.4.1.229"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0016740","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"Skp1-protein-hydroxyproline N-acetylglucosaminyltransferase activity","secondary_identifiers":["RHEA:17841"],"synonyms":[{"name":"Skp1-HyPro GlcNAc-transferase activity","type":"related"},{"name":"UDP-GlcNAc:Skp1-hydroxyproline GlcNAc-transferase activity","type":"related"},{"name":"UDP-GlcNAc:hydroxyproline polypeptide GlcNAc-transferase activity","type":"related"},{"name":"UDP-N-acetyl-D-glucosamine:Skp1-protein-hydroxyproline N-acetyl-D-glucosaminyl-transferase activity","type":"related"},{"name":"UDP-N-acetylglucosamine (GlcNAc):hydroxyproline polypeptide GlcNAc-transferase activity","type":"related"}],"termid":"GO:0033830"}


id: FYPO:0000691
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of DNA-1,N6-ethenoadenine N-glycosylase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"normal DNA-1,N6-ethenoadenine N-glycosylase activity","termid":"FYPO:0000691"}


id: GO:0090231
data:
  {"annotated_genes":["SJAG_03353","SJAG_03681","SJAG_04259","SJAG_01679","SJAG_00883","SJAG_03126","SJAG_02451","SJAG_02169","SJAG_03327","SJAG_02336","SJAG_01297","SJAG_01837"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109066,105713,113815,92535,115643,101405,110094,116131,117762],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902426"},{"annotations":[96010],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140499"},{"annotations":[115648],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905326"},{"annotations":[118538],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090267"},{"annotations":[103160],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905325"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the spindle checkpoint, a cell cycle checkpoint that delays the metaphase/anaphase transition until the spindle is correctly assembled and oriented, and chromosomes are attached to the spindle.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle checkpoint","termid":"GO:1901976"},{"relation_name":"regulates","term_name":"spindle checkpoint signaling","termid":"GO:0031577"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00883":null,"SJAG_01297":null,"SJAG_01679":null,"SJAG_01837":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02451":null,"SJAG_03126":null,"SJAG_03327":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0023052","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of spindle checkpoint","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0090231","terms_by_termid":{"GO:0090267":null,"GO:0140499":null,"GO:1902426":null,"GO:1905325":null,"GO:1905326":null}}


id: PR:Q9P3T9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bsd1 gene.","definition_xrefs":["UniProtKB:Q9P3T9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metal homeostasis protein bsd1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC328.07c","synonyms":[{"name":"Spom972h-bsd1","type":"exact"}],"termid":"PR:Q9P3T9"}


id: GO:0019455
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown, via the compound cystine, of L-cysteine, catalyzed by the enzyme cystine reductase.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-cysteine catabolic process via cystine","termid":"GO:0019453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006790","GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"L-cysteine catabolic process via cystine, using cystine reductase","synonyms":[{"name":"L-cysteine breakdown via cystine, using cystine reductase","type":"exact"},{"name":"L-cysteine degradation via cystine, using cystine reductase","type":"exact"}],"termid":"GO:0019455"}


id: SO:0000979
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-protein_coding gene that encodes a guide_RNA.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non_protein_coding","termid":"SO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gRNA_encoding","synonyms":[{"name":"gRNA encoding","type":"exact"}],"termid":"SO:0000979"}


id: GO:0034829
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-hydroxydec-2,4-diene-1,10-dioate + H2O = (2Z)-2,4-dihydroxydec-2-enedioate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-hydroxydec-2,4-diene-1,10-dioate hydratase activity (obsolete GO:0034829)","termid":"GO:0034829"}


id: GO:0045087
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens.","definition_xrefs":["GO_REF:0000022","GOC:ebc","GOC:add","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response","termid":"GO:0006955"},{"relation_name":"is_a","term_name":"defense response to symbiont","termid":"GO:0140546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"innate immune response","secondary_identifiers":["GO:0002226","Reactome:R-HSA-168249","Wikipedia:Innate_immune_system"],"synonyms":[{"name":"innate immunity","type":"exact"},{"name":"nonspecific immune response","type":"exact"}],"termid":"GO:0045087"}


id: PBO:0077336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM72 antisense RNA 1","termid":"PBO:0077336"}


id: PBO:0052726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 18","termid":"PBO:0052726"}


id: GO:0019847
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Acts to inhibit neural function in another living organism.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete neurotoxin activity (obsolete GO:0019847)","synonyms":[{"name":"neurotoxin activity","type":"exact"}],"termid":"GO:0019847"}


id: PBO:0052018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JMJD7-PLA2G4B readthrough","termid":"PBO:0052018"}


id: GO:1905017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of isoleucine-tRNA ligase activity.","definition_xrefs":["PMID:1665486","GO_REF:0000059","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of isoleucine-tRNA ligase activity (obsolete GO:1905017)","synonyms":[{"name":"activation of L-isoleucine:tRNAIle ligase (AMP-forming)","type":"narrow"},{"name":"activation of isoleucine translase activity","type":"narrow"},{"name":"activation of isoleucine-tRNA ligase activity","type":"narrow"},{"name":"activation of isoleucine-tRNA synthetase activity","type":"narrow"},{"name":"activation of isoleucine-transfer RNA ligase activity","type":"narrow"},{"name":"activation of isoleucyl-tRNA synthetase activity","type":"narrow"},{"name":"activation of isoleucyl-transfer RNA synthetase activity","type":"narrow"},{"name":"activation of isoleucyl-transfer ribonucleate synthetase activity","type":"narrow"},{"name":"positive regulation of L-isoleucine:tRNAIle ligase (AMP-forming)","type":"exact"},{"name":"positive regulation of isoleucine translase activity","type":"exact"},{"name":"positive regulation of isoleucine-tRNA synthetase activity","type":"exact"},{"name":"positive regulation of isoleucine-transfer RNA ligase activity","type":"exact"},{"name":"positive regulation of isoleucyl-tRNA synthetase activity","type":"exact"},{"name":"positive regulation of isoleucyl-transfer RNA synthetase activity","type":"exact"},{"name":"positive regulation of isoleucyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"up regulation of L-isoleucine:tRNAIle ligase (AMP-forming)","type":"exact"},{"name":"up regulation of isoleucine translase activity","type":"exact"},{"name":"up regulation of isoleucine-tRNA ligase activity","type":"exact"},{"name":"up regulation of isoleucine-tRNA synthetase activity","type":"exact"},{"name":"up regulation of isoleucine-transfer RNA ligase activity","type":"exact"},{"name":"up regulation of isoleucyl-tRNA synthetase activity","type":"exact"},{"name":"up regulation of isoleucyl-transfer RNA synthetase activity","type":"exact"},{"name":"up regulation of isoleucyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"up-regulation of L-isoleucine:tRNAIle ligase (AMP-forming)","type":"exact"},{"name":"up-regulation of isoleucine translase activity","type":"exact"},{"name":"up-regulation of isoleucine-tRNA ligase activity","type":"exact"},{"name":"up-regulation of isoleucine-tRNA synthetase activity","type":"exact"},{"name":"up-regulation of isoleucine-transfer RNA ligase activity","type":"exact"},{"name":"up-regulation of isoleucyl-tRNA synthetase activity","type":"exact"},{"name":"up-regulation of isoleucyl-transfer RNA synthetase activity","type":"exact"},{"name":"up-regulation of isoleucyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"upregulation of L-isoleucine:tRNAIle ligase (AMP-forming)","type":"exact"},{"name":"upregulation of isoleucine translase activity","type":"exact"},{"name":"upregulation of isoleucine-tRNA ligase activity","type":"exact"},{"name":"upregulation of isoleucine-tRNA synthetase activity","type":"exact"},{"name":"upregulation of isoleucine-transfer RNA ligase activity","type":"exact"},{"name":"upregulation of isoleucyl-tRNA synthetase activity","type":"exact"},{"name":"upregulation of isoleucyl-transfer RNA synthetase activity","type":"exact"},{"name":"upregulation of isoleucyl-transfer ribonucleate synthetase activity","type":"exact"}],"termid":"GO:1905017"}


id: GO:0005052
data:
  {"annotated_genes":["SJAG_00702"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75451],"is_not":false,"summary":null,"term":"GO:0005052"}]},"cv_name":"molecular_function","definition":"Binding to a type 1 peroxisome targeting signal, a tripeptide with the consensus sequence (S/A/C)-(K/R/H)-L.","definition_xrefs":["GOC:mah","PMID:11687502"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome targeting sequence binding","termid":"GO:0000268"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00702":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005048"}],"interesting_parent_ids":["GO:0005048","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"peroxisome matrix targeting signal-1 binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"PEX5","type":"narrow"},{"name":"PTS1 binding","type":"exact"},{"name":"PTS1 receptor","type":"narrow"},{"name":"peroxisomal targeting signal 1 (PTS1) binding","type":"exact"},{"name":"peroxisome targeting signal-1 binding","type":"exact"},{"name":"peroxisome targeting signal-1 receptor","type":"narrow"}],"termid":"GO:0005052","terms_by_termid":{"GO:0005052":null}}


id: PBO:0060844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofilament medium pseudogene 1","termid":"PBO:0060844"}


id: PBO:0070563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 29","termid":"PBO:0070563"}


id: MONDO:0035320
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare type of familial hypoaldosteronism characterized by early infantile onset of vomiting, diarrhea, severe dehydration, and failure to thrive. Analysis of plasma electrolytes shows hyponatremia, hyperkalemia, and acidosis. Plasma renin activity is elevated, and aldosterone levels are low.","definition_xrefs":["Orphanet:556030"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"familial hypoaldosteronism","termid":"MONDO:0018541"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"early-onset familial hypoaldosteronism","secondary_identifiers":["UMLS:C5680171","GARD:22243","ICD10CM:E27.4","MEDGEN:1842560"],"synonyms":[{"name":"Early-onset familial hyperreninemic hypoaldosteronism","type":"exact"},{"name":"Severe aldosterone synthase deficiency","type":"exact"}],"termid":"MONDO:0035320","xrefs":{"Monarch":{"xref_id":"0035320"}}}


id: PR:Q09722
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A eukaryotic translation initiation factor 3 subunit M that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit M (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1751.03","secondary_identifiers":["UniProtKB:Q09722"],"synonyms":[{"name":"Spom972h-EIF3M","type":"exact"},{"name":"eIF3m (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09722"}


id: FYPO:0005028
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which dimethylation of lysine at position 20 of histone H4 occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H4-K20 methylation during vegetative growth","termid":"FYPO:0004215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0002274","FYPO:0005447","FYPO:0001320","FYPO:0002494"],"is_obsolete":false,"name":"decreased H4-K20 dimethylation during vegetative growth","synonyms":[{"name":"decreased H4K20me2 during vegetative growth","type":"exact"},{"name":"decreased histone H4-K20 dimethylation during mitotic cell cycle","type":"related"},{"name":"decreased histone H4-K20 dimethylation during vegetative growth","type":"exact"},{"name":"decreased histone lysine H4-K20 dimethylation during vegetative growth","type":"exact"},{"name":"reduced histone H4-K20 dimethylation during vegetative growth","type":"exact"}],"termid":"FYPO:0005028"}


id: PBO:0084666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial adenylate kinase; catalyzes the reversible synthesis of GTP and AMP from GDP and ADP; may serve as a back-up for synthesizing GTP or ADP depending on metabolic conditions; 3' sequence of ADK2 varies with strain background","termid":"PBO:0084666"}


id: PBO:0077811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor protein p53 binding protein 2","termid":"PBO:0077811"}


id: GO:0070196
data:
  {"annotated_genes":["SJAG_02376"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113195],"is_not":false,"summary":null,"term":"GO:0070196"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the eukaryotic translation initiation factor 3 complex.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02376":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"eIF-3 assembly","type":"exact"},{"name":"eIF3 assembly","type":"exact"}],"termid":"GO:0070196","terms_by_termid":{"GO:0070196":null}}


id: PBO:0039317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALMS1 intronic transcript 1","termid":"PBO:0039317"}


id: PBO:0046848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 9","termid":"PBO:0046848"}


id: GO:0019418
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the conversion of sulfide to elemental sulfur in a higher oxidation state, or to sulfite or sulfate.","definition_xrefs":["MetaCyc:Sulfide-Oxidation"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"sulfide oxidation","synonyms":[{"name":"sulphide oxidation","type":"exact"}],"termid":"GO:0019418"}


id: PBO:0000153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-C2H2 type","termid":"PBO:0000153"}


id: PBO:0041070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain protein I3 pseudogene 3","termid":"PBO:0041070"}


id: FYPO:0004117
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an inviable cell that does not divide, and that has a septum with normal size, shape, or structure.","definition_xrefs":["PMID:15116432","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"normal septum morphology","termid":"FYPO:0006213"},{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division","termid":"FYPO:0001991"},{"relation_name":"is_a","term_name":"normal septum morphology","termid":"FYPO:0006213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000004","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, normal septum morphology","synonyms":[{"name":"inviable after spore germination, undivided cell, normal septum morphology","type":"exact"},{"name":"inviable after spore germination, without cell division, normal septum formation","type":"exact"},{"name":"inviable following spore germination, without cell division, normal septum morphology","type":"exact"},{"name":"inviable germinated spore, without cell division, normal septum morphology","type":"exact"},{"name":"lethal after spore germination, without cell division, normal septum morphology","type":"exact"}],"termid":"FYPO:0004117"}


id: GO:1900883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 17-methylnonadec-1-ene.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkene biosynthetic process","termid":"GO:0043450"},{"relation_name":"is_a","term_name":"17-methylnonadec-1-ene metabolic process","termid":"GO:1900882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"17-methylnonadec-1-ene biosynthetic process","synonyms":[{"name":"17-methylnonadec-1-ene anabolism","type":"exact"},{"name":"17-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"17-methylnonadec-1-ene formation","type":"exact"},{"name":"17-methylnonadec-1-ene synthesis","type":"exact"}],"termid":"GO:1900883"}


id: GO:0050458
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + H2O + lauroyl-CoA = (3S,4S)-3-hydroxytetradecane-1,3,4-tricarboxylate + CoA + H+.","definition_xrefs":["RHEA:10364"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, acyl groups converted into alkyl on transfer","termid":"GO:0046912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"decylhomocitrate synthase activity","secondary_identifiers":["KEGG_REACTION:R03859","MetaCyc:DECYLHOMOCITRATE-SYNTHASE-RXN","EC:2.3.3.4"],"synonyms":[{"name":"2-decylhomocitrate synthase activity","type":"related"},{"name":"3-hydroxytetradecane-1,3,4-tricarboxylate 2-oxoglutarate-lyase (CoA- acylating) activity","type":"related"},{"name":"3-hydroxytetradecane-1,3,4-tricarboxylate 2-oxoglutarate-lyase (CoA-acylating)","type":"related"},{"name":"dodecanoyl-CoA:2-oxoglutarate C-dodecanoyltransferase (thioester-hydrolysing, 1-carboxyundecyl-forming)","type":"related"}],"termid":"GO:0050458"}


id: PR:Q10275
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mba1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10275"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C13G7.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G7.11","synonyms":[{"name":"Spom972h-mba1","type":"exact"}],"termid":"PR:Q10275"}


id: PBO:0069598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 875, pseudogene","termid":"PBO:0069598"}


id: PBO:0033816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic APC inhibitor Mes1","termid":"PBO:0033816"}


id: PBO:0084502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific protein required for prospore membrane morphogenesis; required for the proper shape of the prospore membrane (PSM) and for spore wall formation; functions cooperatively with SPO71 in PSM elongation; physically interacts with Spo71p; genetically antagonistic to SPO1, similar to SPO71; localizes to the PSM; required for spore wall formation during sporulation; dispensable for both nuclear divisions during meiosis; dysferlin domain-only protein","termid":"PBO:0084502"}


id: PR:Q10477
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pmc3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of RNA polymerase II transcription subunit 27 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17C9.05c","synonyms":[{"name":"RNA polymerase II mediator complex protein pmc3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-pmc3","type":"exact"},{"name":"mediator complex subunit 27 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10477"}


id: GO:0140861
data:
  {"annotated_genes":["SJAG_03145","SJAG_01385","SJAG_03628","SJAG_00783","SJAG_02701","SJAG_04190","SJAG_04039","SJAG_04613","SJAG_05282","SJAG_02439","SJAG_02198","SJAG_00187","SJAG_04272","SJAG_03579","SJAG_02500","SJAG_00045","SJAG_02698","SJAG_02303","SJAG_04097","SJAG_03792","SJAG_04989","SJAG_00349","SJAG_02990","SJAG_01611","SJAG_04793","SJAG_03230"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74153,75537,90686,92506,94186,94606,96116,96420,96644,96885,99033,100719,100778,100953,101205,101492,105857,106044,106547,108711,109564,110908,115006,116576,117462,120445],"is_not":false,"summary":null,"term":"GO:0140861"}]},"cv_name":"biological_process","definition":"A chromatin remodeling process that allows DNA repair enzyme to access genomic DNA and repair DNA lesions.","definition_xrefs":["PMID:35689883","PMID:29095668","PMID:28053344","PMID:15528408"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin remodeling","termid":"GO:0006338"},{"relation_name":"part_of","term_name":"DNA damage response","termid":"GO:0006974"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00045":null,"SJAG_00187":null,"SJAG_00349":null,"SJAG_00783":null,"SJAG_01385":null,"SJAG_01611":null,"SJAG_02198":null,"SJAG_02303":null,"SJAG_02439":null,"SJAG_02500":null,"SJAG_02698":null,"SJAG_02701":null,"SJAG_02990":null,"SJAG_03145":null,"SJAG_03230":null,"SJAG_03579":null,"SJAG_03628":null,"SJAG_03792":null,"SJAG_04039":null,"SJAG_04097":null,"SJAG_04190":null,"SJAG_04272":null,"SJAG_04613":null,"SJAG_04793":null,"SJAG_04989":null,"SJAG_05282":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006325","GO:0008150"],"is_obsolete":false,"name":"DNA repair-dependent chromatin remodeling","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"DNA damage-dependent chromatin remodelling","type":"exact"}],"termid":"GO:0140861","terms_by_termid":{"GO:0140861":null}}


id: FYPO:0000249
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which cell growth is decreased relative to normal in a medium containing ammonia as the nitrogen source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0000139","FYPO:0001985","FYPO:0005447","FYPO:0000003","FYPO:0002058","FYPO:0002057"],"is_obsolete":false,"name":"decreased cell population growth on ammonia nitrogen source","secondary_identifiers":["FYPO:0000248"],"synonyms":[{"name":"decreased growth on ammonia nitrogen source","type":"broad"},{"name":"decreased vegetative cell growth on ammonia nitrogen source","type":"exact"},{"name":"growth defect, slow growth in minimal media","type":"related"},{"name":"growth defect, slow growth with ammonia nitrogen source","type":"narrow"},{"name":"reduced cell growth on ammonia nitrogen source","type":"exact"},{"name":"slow cell growth in minimal medium","type":"related"},{"name":"slow cell growth on ammonia nitrogen source","type":"narrow"}],"termid":"FYPO:0000249"}


id: GO:0035308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process the stops, prevents, or reduces the frequency, rate or extent of removal of phosphate groups from a protein.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of protein dephosphorylation (obsolete GO:0035308)","synonyms":[{"name":"down regulation of protein amino acid dephosphorylation","type":"exact"},{"name":"down-regulation of protein amino acid dephosphorylation","type":"exact"},{"name":"downregulation of protein amino acid dephosphorylation","type":"exact"},{"name":"inhibition of protein amino acid dephosphorylation","type":"narrow"},{"name":"negative regulation of protein amino acid dephosphorylation","type":"exact"}],"termid":"GO:0035308"}


id: GO:0001588
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the neurotransmitter dopamine and activating adenylate cyclase via coupling to Gs to initiate a change in cell activity.","definition_xrefs":["ISBN:0953351033","IUPHAR_RECEPTOR:2260","IUPHAR_RECEPTOR:2252","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dopamine neurotransmitter receptor activity","termid":"GO:0004952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"dopamine neurotransmitter receptor activity, coupled via Gs","secondary_identifiers":["GO:0001590","GO:0001589"],"synonyms":[{"name":"dopamine D1 receptor activity","type":"narrow"},{"name":"dopamine D5 receptor activity","type":"narrow"}],"termid":"GO:0001588"}


id: PBO:0062836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase complex subunit pseudogene 2","termid":"PBO:0062836"}


id: GO:0032069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of nuclease activity, the hydrolysis of ester linkages within nucleic acids.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of nuclease activity (obsolete GO:0032069)","synonyms":[{"name":"nuclease regulator activity","type":"related"}],"termid":"GO:0032069"}


id: GO:0050386
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-carbamoyl-L-aspartate + H2O + 2 H+ = L-aspartate + CO2 + NH4.","definition_xrefs":["RHEA:14365","EC:3.5.1.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016810","GO:0003824"],"is_obsolete":false,"name":"ureidosuccinase activity","secondary_identifiers":["MetaCyc:UREIDOSUCCINASE-RXN","KEGG_REACTION:R00484"],"synonyms":[{"name":"N-carbamoyl-L-aspartate amidohydrolase activity","type":"related"}],"termid":"GO:0050386"}


id: MONDO:0100437
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A retinopathy caused by a variant in the X-linked gene, RPGR.","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"RPGR-related retinopathy","synonyms":[{"name":"COD1","type":"narrow"},{"name":"CORDX1","type":"narrow"},{"name":"RP3","type":"narrow"},{"name":"RPGR retinitis pigmentosa","type":"narrow"},{"name":"RPGR retinopathy","type":"exact"},{"name":"X-linked cone dystrophy 1","type":"narrow"},{"name":"X-linked cone-rod dystrophy 1","type":"narrow"},{"name":"X-linked cone-rod dystrophy type 1","type":"narrow"},{"name":"choroidoretinal degeneration with retinal reflex in heterozygous women","type":"narrow"},{"name":"cone dystrophy 1, X-linked","type":"narrow"},{"name":"cone dystrophy X-linked 1","type":"narrow"},{"name":"cone-rod degeneration, X-linked","type":"narrow"},{"name":"cone-rod dystrophy X-linked 1","type":"narrow"},{"name":"cone-rod dystrophy, X-linked, 1","type":"narrow"},{"name":"cone-rod dystrophy, X-linked, type 1","type":"narrow"},{"name":"macular degeneration, X-linked atrophic","type":"narrow"},{"name":"retinal ciliopathy due to mutation in the RPGR gene","type":"narrow"},{"name":"retinitis pigmentosa 15","type":"narrow"},{"name":"retinitis pigmentosa 3","type":"narrow"},{"name":"retinitis pigmentosa caused by mutation in RPGR","type":"narrow"},{"name":"retinitis pigmentosa type 3","type":"narrow"}],"termid":"MONDO:0100437","xrefs":{"Monarch":{"xref_id":"0100437"}}}


id: PBO:0017818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E4 Prp19","termid":"PBO:0017818"}


id: MONDO:0023193
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Friedman Goodman syndrome","termid":"MONDO:0023193","xrefs":{"Monarch":{"xref_id":"0023193"}}}


id: MONDO:0009657
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare autosomal recessive lysosomal storage disease caused by deficiency of the enzyme acetyl-CoA:alpha-glucosaminide acetyltransferase. It is characterized by behavioral changes, sleep disturbances, and mental developmental delays.","definition_xrefs":["NCIT:C84899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucopolysaccharidosis type 3","termid":"MONDO:0018937"},{"relation_name":"is_a","term_name":"lysosomal storage disease with skeletal involvement","termid":"MONDO:0800088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792","MONDO:0002561"],"is_obsolete":false,"name":"mucopolysaccharidosis type 3C","secondary_identifiers":["NANDO:1200103","GARD:7073","icd11.foundation:1755913480","UMLS:C0086649","OMIM:252930","Orphanet:79271","SCTID:75238000","DOID:0111393","NANDO:2201176","MEDGEN:39477"],"synonyms":[{"name":"Acetyl-CoA alpha-glucosaminide n-acetyltransferase deficiency","type":"related"},{"name":"HGSNAT deficiency","type":"exact"},{"name":"MPS 3C","type":"related"},{"name":"MPS III C","type":"exact"},{"name":"MPS IIIC","type":"related"},{"name":"MPS3C","type":"exact"},{"name":"MPSIIIC","type":"exact"},{"name":"Mucopoly-saccharidosis type 3C","type":"related"},{"name":"Sanfilippo C","type":"exact"},{"name":"Sanfilippo syndrome C","type":"related"},{"name":"Sanfilippo syndrome type C","type":"exact"},{"name":"acetyl-CoA:alpha-glucosaminide N-acetyltransferase deficiency","type":"related"},{"name":"heparan-alpha-glucosaminide N-acetyltransferase deficiency","type":"exact"},{"name":"mucopolysaccharidosis type 3C","type":"exact"},{"name":"mucopolysaccharidosis type IIIC","type":"exact"},{"name":"mucopolysaccharidosis type IIIC (Sanfilippo C)","type":"exact"},{"name":"mucopolysaccharidosis, type 3C","type":"related"},{"name":"mucopolysaccharidosis, type IIIC","type":"related"}],"termid":"MONDO:0009657","xrefs":{"Monarch":{"xref_id":"0009657"}}}


id: PATO:0000515
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A resistance quality inhering in a bearer by virtue of its disposition to endure or being insensitive to a stimulus.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"resistance to","termid":"PATO:0001046"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tolerant to","synonyms":[{"name":"tolerant","type":"exact"}],"termid":"PATO:0000515"}


id: MONDO:0957252
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary dyskinesia, primary, 50","secondary_identifiers":["UMLS:C5830473","OMIM:620356","MEDGEN:1841109"],"termid":"MONDO:0957252","xrefs":{"Monarch":{"xref_id":"0957252"}}}


id: GO:0120539
data:
  {"annotated_genes":["SJAG_00721"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91451],"is_not":false,"summary":null,"term":"GO:0120539"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 4-hydroxy-3-methoxy-5-(all-trans-polyprenyl)benzoate + H+ = a 2-methoxy-6-(all-trans-polyprenyl)phenol + CO2.","definition_xrefs":["PMID:38295803","PMID:38425362","RHEA:81179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00721":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"4-hydroxy-3-methoxy-5-polyprenylbenzoate decarboxylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-2162195","EC:4.1.1.130"],"termid":"GO:0120539","terms_by_termid":{"GO:0120539":null}}


id: GO:1990650
data:
  {"annotated_genes":["SJAG_00063"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110142],"is_not":false,"summary":null,"term":"GO:1990650"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 2,4,5,6-tetrakisphosphate + H2O = 1D-myo-inositol 2,4,6-trisphosphate + phosphate.","definition_xrefs":["PMID:15316017","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol tetrakisphosphate phosphatase activity","termid":"GO:0052743"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00063":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"inositol-2,4,5,6-tetrakisphosphate 5-phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990650","terms_by_termid":{"GO:1990650":null}}


id: GO:0110151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of biomineralization, the formation and deposition of mineral crystals by living organisms.","definition_xrefs":["PMID:22992051"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of biomineralization (obsolete GO:0110151)","synonyms":[{"name":"positive regulation of biomineral formation","type":"narrow"},{"name":"positive regulation of biomineralisation","type":"exact"},{"name":"positive regulation of mineralisation","type":"exact"},{"name":"positive regulation of mineralization","type":"exact"}],"termid":"GO:0110151"}


id: PBO:0069186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 440, pseudogene","termid":"PBO:0069186"}


id: MONDO:0004486
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenomyoma that arises from the cervix and is characterized by the presence of endocervical mucinous glands and a smooth muscle cell component. There is no atypia or significant mitotic activity present.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cervical adenomyoma","termid":"MONDO:0003238"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endocervical type cervical adenomyoma","secondary_identifiers":["DOID:8177","MEDGEN:275706","UMLS:C1516405","NCIT:C40232"],"synonyms":[{"name":"cervical adenomyoma, endocervical type","type":"exact"}],"termid":"MONDO:0004486","xrefs":{"Monarch":{"xref_id":"0004486"}}}


id: GO:0050412
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trans-cinnamate + UDP-D-glucose = 1-O-trans-cinnamoyl-beta-D-glucopyranose + UDP.","definition_xrefs":["EC:2.4.1.177","RHEA:13437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"cinnamate beta-D-glucosyltransferase activity","secondary_identifiers":["MetaCyc:CINNAMATE-GLUCOSYLTRANSFERASE-RXN","KEGG_REACTION:R02256"],"synonyms":[{"name":"UDP-glucose:trans-cinnamate beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPG:t-cinnamate glucosyltransferase activity","type":"related"},{"name":"UDPglucose:trans-cinnamate beta-D-glucosyltransferase activity","type":"related"},{"name":"cinnamate b-D-glucosyltransferase activity","type":"exact"},{"name":"cinnamate glucosyltransferase activity","type":"exact"},{"name":"uridine diphosphoglucose-cinnamate glucosyltransferase activity","type":"related"}],"termid":"GO:0050412"}


id: PBO:0064687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 23","termid":"PBO:0064687"}


id: PBO:0056069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphocyte antigen 6 family member E","termid":"PBO:0056069"}


id: PATO:0000333
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color pattern inhering in a bearer by virtue of bearer's being marked with a round area of different hue or degree of saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multi-colored","termid":"PATO:0001533"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spotted","termid":"PATO:0000333"}


id: GO:0010457
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which the two centrioles within a centrosome remain tightly paired.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"part_of","term_name":"centrosome cycle","termid":"GO:0007098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0000226","GO:0008150","GO:0007049","GO:0007010"],"is_obsolete":false,"name":"centriole-centriole cohesion","termid":"GO:0010457"}


id: GO:1900982
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phenazine biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"regulation of phenazine biosynthetic process","termid":"GO:1900980"},{"relation_name":"positively_regulates","term_name":"phenazine biosynthetic process","termid":"GO:0002047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of phenazine biosynthetic process","synonyms":[{"name":"activation of acridizine biosynthesis","type":"related"},{"name":"activation of acridizine biosynthetic process","type":"related"},{"name":"activation of azophenylene biosynthesis","type":"related"},{"name":"activation of azophenylene biosynthetic process","type":"related"},{"name":"activation of dibenzo-p-diazine biosynthesis","type":"related"},{"name":"activation of dibenzo-p-diazine biosynthetic process","type":"related"},{"name":"activation of dibenzopyrazine biosynthesis","type":"related"},{"name":"activation of dibenzopyrazine biosynthetic process","type":"related"},{"name":"activation of phenazine biosynthetic process","type":"narrow"},{"name":"positive regulation of acridizine biosynthesis","type":"related"},{"name":"positive regulation of acridizine biosynthetic process","type":"related"},{"name":"positive regulation of azophenylene biosynthesis","type":"related"},{"name":"positive regulation of azophenylene biosynthetic process","type":"related"},{"name":"positive regulation of dibenzo-p-diazine biosynthesis","type":"related"},{"name":"positive regulation of dibenzo-p-diazine biosynthetic process","type":"related"},{"name":"positive regulation of dibenzopyrazine biosynthesis","type":"related"},{"name":"positive regulation of dibenzopyrazine biosynthetic process","type":"related"},{"name":"up regulation of acridizine biosynthesis","type":"related"},{"name":"up regulation of acridizine biosynthetic process","type":"related"},{"name":"up regulation of azophenylene biosynthesis","type":"related"},{"name":"up regulation of azophenylene biosynthetic process","type":"related"},{"name":"up regulation of dibenzo-p-diazine biosynthesis","type":"related"},{"name":"up regulation of dibenzo-p-diazine biosynthetic process","type":"related"},{"name":"up regulation of dibenzopyrazine biosynthesis","type":"related"},{"name":"up regulation of dibenzopyrazine biosynthetic process","type":"related"},{"name":"up regulation of phenazine biosynthetic process","type":"exact"},{"name":"up-regulation of acridizine biosynthesis","type":"related"},{"name":"up-regulation of acridizine biosynthetic process","type":"related"},{"name":"up-regulation of azophenylene biosynthesis","type":"related"},{"name":"up-regulation of azophenylene biosynthetic process","type":"related"},{"name":"up-regulation of dibenzo-p-diazine biosynthesis","type":"related"},{"name":"up-regulation of dibenzo-p-diazine biosynthetic process","type":"related"},{"name":"up-regulation of dibenzopyrazine biosynthesis","type":"related"},{"name":"up-regulation of dibenzopyrazine biosynthetic process","type":"related"},{"name":"up-regulation of phenazine biosynthetic process","type":"exact"},{"name":"upregulation of acridizine biosynthesis","type":"related"},{"name":"upregulation of acridizine biosynthetic process","type":"related"},{"name":"upregulation of azophenylene biosynthesis","type":"related"},{"name":"upregulation of azophenylene biosynthetic process","type":"related"},{"name":"upregulation of dibenzo-p-diazine biosynthesis","type":"related"},{"name":"upregulation of dibenzo-p-diazine biosynthetic process","type":"related"},{"name":"upregulation of dibenzopyrazine biosynthesis","type":"related"},{"name":"upregulation of dibenzopyrazine biosynthetic process","type":"related"},{"name":"upregulation of phenazine biosynthetic process","type":"exact"}],"termid":"GO:1900982"}


id: PBO:0043630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPI coat complex subunit beta 2","termid":"PBO:0043630"}


id: PBO:0004099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin Pom152","termid":"PBO:0004099"}


id: PBO:0084549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the REF (RNA and export factor binding proteins) family; when overexpressed, can substitute for the function of Yra1p in export of poly(A)+ mRNA from the nucleus","termid":"PBO:0084549"}


id: PBO:0083347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the verified gene DNF1/YER166W","termid":"PBO:0083347"}


id: PBO:0040835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BST2 interferon stimulated positive regulator","termid":"PBO:0040835"}


id: PBO:0027493
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_miconazole","termid":"PBO:0027493"}


id: PBO:0084421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Major isoform of tropomyosin; binds to and stabilizes actin cables and filaments, which direct polarized cell growth and the distribution of several organelles; acetylated by the NatB complex and acetylated form binds actin most efficiently; TPM1 has a paralog, TPM2, that arose from the whole genome duplication","termid":"PBO:0084421"}


id: GO:0072577
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in an endothelial cell. An endothelial cell comprises the outermost layer or lining of anatomical structures and can be squamous or cuboidal.","definition_xrefs":["CL:0000115","GOC:mah","GOC:BHF","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process","termid":"GO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endothelial cell apoptotic process","synonyms":[{"name":"apoptosis of endothelial cells","type":"exact"},{"name":"endothelial cell apoptosis","type":"narrow"},{"name":"endothelial cell programmed cell death by apoptosis","type":"exact"},{"name":"killing of endothelial cells","type":"exact"},{"name":"programmed cell death of endothelial cells by apoptosis","type":"exact"},{"name":"programmed cell death, endothelial cells","type":"exact"}],"termid":"GO:0072577"}


id: PBO:0067213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 279, pseudogene","termid":"PBO:0067213"}


id: GO:0070229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of lymphocyte death by apoptotic process.","definition_xrefs":["GOC:add","GOC:mtg_apoptosis","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lymphocyte apoptotic process","termid":"GO:0070228"},{"relation_name":"is_a","term_name":"negative regulation of leukocyte apoptotic process","termid":"GO:2000107"},{"relation_name":"negatively_regulates","term_name":"lymphocyte apoptotic process","termid":"GO:0070227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lymphocyte apoptotic process","synonyms":[{"name":"down regulation of lymphocyte apoptosis","type":"exact"},{"name":"down-regulation of lymphocyte apoptosis","type":"exact"},{"name":"downregulation of lymphocyte apoptosis","type":"exact"},{"name":"inhibition of lymphocyte apoptosis","type":"narrow"},{"name":"negative regulation of lymphocyte apoptosis","type":"narrow"}],"termid":"GO:0070229"}


id: MONDO:0014115
data:
  {"annotated_genes":["SJAG_01197"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86801],"is_not":false,"summary":null,"term":"MONDO:0014115"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01197":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hypomyelination with brain stem and spinal cord involvement and leg spasticity","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:17554","Orphanet:363412","MEDGEN:1667792","OMIM:615281","UMLS:C4755254"],"synonyms":[{"name":"HBSL","type":"exact"},{"name":"aspartyl-tRNA synthetase deficiency","type":"related"},{"name":"hypomyelination with brainstem and spinal cord involvement and leg spasticity","type":"related"}],"termid":"MONDO:0014115","terms_by_termid":{"MONDO:0014115":null},"xrefs":{"Monarch":{"xref_id":"0014115"}}}


id: PBO:0069026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 271, pseudogene","termid":"PBO:0069026"}


id: PBO:0080783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XK related, Y-linked pseudogene 3","termid":"PBO:0080783"}


id: FYPO:0002879
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which transcription does not occur when the cell is subject to glucose starvation. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished transcription","termid":"FYPO:0002877"},{"relation_name":"is_a","term_name":"decreased transcription during glucose starvation","termid":"FYPO:0003120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0000294","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abolished transcription during glucose starvation","synonyms":[{"name":"abolished glucose deprivation induced gene expression","type":"related"},{"name":"abolished transcription during cellular response to glucose starvation","type":"exact"},{"name":"abolished transcription during glucose depletion","type":"exact"},{"name":"abolished transcription during glucose deprivation","type":"exact"},{"name":"abolished transcription during glucose limitation","type":"related"},{"name":"abolished transcription during glucose starvation during mitotic cell cycle","type":"related"},{"name":"abolished transcription during glucose starvation during vegetative growth","type":"exact"},{"name":"abolished transcription in response to glucose starvation","type":"exact"},{"name":"transcription abolished during glucose starvation","type":"exact"}],"termid":"FYPO:0002879"}


id: PBO:0081464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 334","termid":"PBO:0081464"}


id: PBO:0091225
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SODium","termid":"PBO:0091225"}


id: PBO:0063588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal biogenesis factor 3","termid":"PBO:0063588"}


id: PBO:0060716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A6","termid":"PBO:0060716"}


id: GO:0110038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of nematode male tail tip morphogenesis.","definition_xrefs":["PMID:28068334","GOC:rz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of nematode male tail tip morphogenesis","termid":"GO:0110037"},{"relation_name":"negatively_regulates","term_name":"nematode male tail tip morphogenesis","termid":"GO:0045138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of nematode male tail tip morphogenesis","termid":"GO:0110038"}


id: GO:0097639
data:
  {"annotated_genes":["SJAG_04637"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102179],"is_not":false,"summary":null,"term":"GO:0097639"}]},"cv_name":"biological_process","definition":"The directed movement of L-lysine from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:8195186","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid import across plasma membrane","termid":"GO:0089718"},{"relation_name":"is_a","term_name":"L-lysine transmembrane transport","termid":"GO:1903401"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04637":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"L-lysine import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1903410"],"synonyms":[{"name":"L-lysine import into cell","type":"exact"}],"termid":"GO:0097639","terms_by_termid":{"GO:0097639":null}}


id: GO:0160246
data:
  {"annotated_genes":["SJAG_00972"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[65767],"is_not":false,"summary":null,"term":"GO:0160246"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 oxidized [2Fe-2S]-[protein] + NADPH = 2 reduced [2Fe-2S]-[protein] + NADP+ + H+.","definition_xrefs":["RHEA:67716"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on iron-sulfur proteins as donors, NAD or NADP as acceptor","termid":"GO:0016731"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00972":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"NADPH-iron-sulfur [2Fe-2S] protein oxidoreductase activity","references_by_uniquename":{"GO_REF:0000002":null},"termid":"GO:0160246","terms_by_termid":{"GO:0160246":null}}


id: GO:0047378
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-acetyl-1-alkyl-sn-glycerol + H2O = 1-alkyl-sn-glycerol + acetate + H+.","definition_xrefs":["RHEA:11552","EC:3.1.1.71"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"acetylalkylglycerol acetylhydrolase activity","secondary_identifiers":["MetaCyc:3.1.1.71-RXN","KEGG_REACTION:R04043"],"synonyms":[{"name":"2-acetyl-1-alkyl-sn-glycerol acetylhydrolase activity","type":"related"},{"name":"alkylacetylglycerol acetylhydrolase activity","type":"related"}],"termid":"GO:0047378"}


id: PBO:0028073
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_single_or_double_cell_division,_arrest_with_anucleate_cell_(obsolete_FYPO:0003761)","termid":"PBO:0028073"}


id: PBO:0084472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Master regulator that regulates transcript levels of the FLP1 gene; acts in concert with Rep2p to regulate transcript levels of the FLP1 gene that promotes plasmid copy amplification and 2-micron plasmid-inheritance; also autoregulates levels of its own transcript; both Rep1p and Rep2p are sumoylated which is important for function","termid":"PBO:0084472"}


id: PBO:0057652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1245a","termid":"PBO:0057652"}


id: GO:0046261
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of 4-nitrotoluene, 1-methyl-4-nitrobenzene.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete 4-nitrotoluene biosynthetic process (obsolete GO:0046261)","synonyms":[{"name":"4-nitrotoluene anabolism","type":"exact"},{"name":"4-nitrotoluene biosynthesis","type":"exact"},{"name":"4-nitrotoluene biosynthetic process","type":"exact"},{"name":"4-nitrotoluene formation","type":"exact"},{"name":"4-nitrotoluene synthesis","type":"exact"},{"name":"4NT biosynthesis","type":"exact"},{"name":"4NT biosynthetic process","type":"exact"}],"termid":"GO:0046261"}


id: PBO:0071325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27 pseudogene 1","termid":"PBO:0071325"}


id: GO:1904563
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phosphatidylinositol 5-phosphate.","definition_xrefs":["GO_REF:0000068","GOC:dph","PMID:23916588","GOC:pad","GOC:autophagy","GOC:PARL","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol phosphate biosynthetic process","termid":"GO:0046854"},{"relation_name":"is_a","term_name":"phosphatidylinositol 5-phosphate metabolic process","termid":"GO:1904562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"phosphatidylinositol 5-phosphate biosynthetic process","synonyms":[{"name":"phosphatidylinositol 5-phosphate anabolism","type":"exact"},{"name":"phosphatidylinositol 5-phosphate biosynthesis","type":"exact"},{"name":"phosphatidylinositol 5-phosphate formation","type":"exact"},{"name":"phosphatidylinositol 5-phosphate synthesis","type":"exact"}],"termid":"GO:1904563"}


id: PBO:0052624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 3","termid":"PBO:0052624"}


id: PBO:0082607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Co-chaperone that binds and regulates Hsp90 family chaperones; plays a role in determining prion variants; important for pp60v-src activity in yeast; homologous to the mammalian p23 proteins, and like p23 can regulate telomerase activity; protein abundance increases in response to DNA replication stress","termid":"PBO:0082607"}


id: MONDO:0015085
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bathing suit ichthyosis (BSI) is a rare variant of autosomal recessive congenital ichthyosis (ARCI) characterized by the presence of large dark scales in specific areas of the body.","definition_xrefs":["Orphanet:100976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive congenital ichthyosis","termid":"MONDO:0017265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"bathing suit ichthyosis","secondary_identifiers":["GARD:16938","icd11.foundation:174005370","SCTID:725588002","UMLS:C4511230","MEDGEN:1386460"],"synonyms":[{"name":"BSI","type":"exact"}],"termid":"MONDO:0015085","xrefs":{"Monarch":{"xref_id":"0015085"}}}


id: GO:0050483
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 5'-IMP + H2O = inosine + phosphate.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete IMP 5'-nucleotidase activity (obsolete GO:0050483)","secondary_identifiers":["MetaCyc:RXN-7607"],"synonyms":[{"name":"IMP 5' nucleotidase activity","type":"exact"},{"name":"IMP-GMP specific 5'-nucleotidase activity","type":"related"}],"termid":"GO:0050483"}


id: MONDO:0002100
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm involving the cardiovascular system.","definition_xrefs":["NCIT:C114940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cancer","termid":"MONDO:0004992"},{"relation_name":"is_a","term_name":"cardiovascular neoplasm","termid":"MONDO:0024757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"cardiovascular cancer","secondary_identifiers":["MEDGEN:858066","DOID:176","UMLS:C3898472"],"synonyms":[{"name":"cancer of cardiovascular system","type":"exact"},{"name":"cardiovascular neoplasm","type":"broad"},{"name":"cardiovascular system cancer","type":"exact"},{"name":"cardiovascular tumors","type":"exact"},{"name":"cardiovascular tumours","type":"exact"},{"name":"malignant cardiovascular neoplasm","type":"exact"},{"name":"malignant cardiovascular system neoplasm","type":"exact"},{"name":"malignant neoplasm of cardiovascular system","type":"exact"}],"termid":"MONDO:0002100","xrefs":{"Monarch":{"xref_id":"0002100"}}}


id: PBO:0017449
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-parasite_of","termid":"PBO:0017449"}


id: PBO:0036180
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H4-K20_trimethylation_during_vegetative_growth","termid":"PBO:0036180"}


id: GO:0009833
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of cellulose and pectin-containing cell walls that form adjacent to the middle lamella following cell division and during cell expansion. An example of this is found in Arabidopsis thaliana.","definition_xrefs":["GOC:mtg_sensu","GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant-type cell wall biogenesis","termid":"GO:0009832"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic cytokinesis","termid":"GO:0000281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"part_of","termid":"GO:0000281"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0044085","GO:0000281","GO:0071554","GO:0008150"],"is_obsolete":false,"name":"plant-type primary cell wall biogenesis","synonyms":[{"name":"cellulose and pectin-containing primary cell wall biogenesis","type":"exact"},{"name":"primary cell wall anabolism","type":"broad"},{"name":"primary cell wall biogenesis","type":"exact"},{"name":"primary cell wall biosynthetic process","type":"broad"},{"name":"primary cell wall formation","type":"broad"},{"name":"primary cell wall synthesis","type":"broad"}],"termid":"GO:0009833"}


id: GO:0034771
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H4 by addition of one methyl group to lysine at position 20 of the histone.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H4-K20 monomethylation (obsolete GO:0034771)","synonyms":[{"name":"histone H4 K20 monomethylation","type":"exact"},{"name":"histone lysine H4 K20 monomethylation","type":"exact"}],"termid":"GO:0034771"}


id: GO:0030107
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a MHC class I molecule of the HLA-A subclass to mediate signaling that inhibits activation of a lymphocyte.","definition_xrefs":["GOC:mah","PMID:9368779","PMID:11929129","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inhibitory MHC class I receptor activity","termid":"GO:0032396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"HLA-A specific inhibitory MHC class I receptor activity","termid":"GO:0030107"}


id: FYPO:0001141
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A conjugation phenotype in which regulation of transcription in response to mating pheromone is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transcriptional response to pheromone","termid":"FYPO:0000984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000298"],"is_obsolete":false,"name":"abolished transcriptional response to pheromone","synonyms":[{"name":"abolished regulation of transcription from RNA polymerase II promoter by pheromones","type":"exact"},{"name":"transcriptional response to pheromone abolished","type":"exact"}],"termid":"FYPO:0001141"}


id: PBO:0039080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkylglycerone phosphate synthase","termid":"PBO:0039080"}


id: GO:0050588
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 8'-apo-beta-carotenol + O2 = (E,E)-7-hydroxy-6-methylhepta-3,5-dienal + 14'-apo-beta-carotenal.","definition_xrefs":["RHEA:26023","EC:1.13.11.67"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)","termid":"GO:0016703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"apo-beta-carotenoid-14',13'-dioxygenase activity","secondary_identifiers":["KEGG_REACTION:R08889","MetaCyc:1.13.12.12-RXN"],"synonyms":[{"name":"8'-apo-beta-carotenol:O2 oxidoreductase activity","type":"related"},{"name":"apo-b-carotenoid-14',13'-dioxygenase activity","type":"exact"}],"termid":"GO:0050588"}


id: PBO:0079594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 D N-terminal like (pseudogene)","termid":"PBO:0079594"}


id: PBO:0081773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 705A","termid":"PBO:0081773"}


id: MOD:00594
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Natural or modified resiues with a mass of 113.047678 Da.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at a resolution below 0.000001 Da","termid":"MOD:00569"},{"relation_name":"is_a","term_name":"residues isobaric at 113.0-113.1 Da","termid":"MOD:00624"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"residues isobaric at 113.047678 Da","termid":"MOD:00594"}


id: PBO:0066612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rhox homeobox family member 1 pseudogene 3","termid":"PBO:0066612"}


id: MONDO:0022177
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of chromosome 13","termid":"MONDO:0700029"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 13q trisomy","secondary_identifiers":["GARD:20883","MESH:C535485","Orphanet:262932","UMLS:C0795849","MEDGEN:162780"],"synonyms":[{"name":"13q duplication","type":"exact"},{"name":"13q trisomy","type":"exact"},{"name":"Duplication 13q","type":"exact"},{"name":"chromosome 13q duplication","type":"exact"},{"name":"partial duplication of chromosome 13q","type":"exact"},{"name":"partial duplication of the long arm of chromosome 13","type":"exact"},{"name":"partial duplication of the long arm of chromosome type 13","type":"exact"},{"name":"partial trisomy 13q","type":"exact"},{"name":"partial trisomy of chromosome 13q","type":"exact"},{"name":"partial trisomy of the long arm of chromosome 13","type":"exact"},{"name":"trisomy 13q","type":"exact"}],"termid":"MONDO:0022177","xrefs":{"Monarch":{"xref_id":"0022177"}}}


id: GO:0036237
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an acyl-glucuronoside + H2O = an alcohol + D-glucuronate.","definition_xrefs":["GOC:BHF","GOC:vk","PMID:22294686"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016798"],"is_obsolete":false,"name":"acyl-glucuronidase activity","synonyms":[{"name":"acyl-glucuronide deglucuronidation activity","type":"narrow"}],"termid":"GO:0036237"}


id: GO:1900751
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a 4-(trimethylammonio)butanoate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["PMID:16365044","PMID:20357772","PMID:20829798","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"amino-acid betaine transport","termid":"GO:0015838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"4-(trimethylammonio)butanoate transport","synonyms":[{"name":"4-(N-trimethylamino)butyrate transport","type":"exact"},{"name":"4-butyrobetaine transport","type":"exact"},{"name":"Actinine transport","type":"related"},{"name":"C7H15NO2 transport","type":"related"},{"name":"butyrobetaine transport","type":"related"},{"name":"deoxycarnitine transport","type":"related"},{"name":"gamma-Butyrobetain transport","type":"exact"},{"name":"gamma-butyrobetaine transport","type":"exact"}],"termid":"GO:1900751"}


id: GO:0008526
data:
  {"annotated_genes":["SJAG_03746","SJAG_03172","SJAG_03741","SJAG_01225","SJAG_03721"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71893,75123,76279,78041,78344],"is_not":false,"summary":null,"term":"GO:0008526"}]},"cv_name":"molecular_function","definition":"Removes phosphatidylinositol from a membrane or a monolayer lipid particle, transports it through the aqueous phase while protected in a hydrophobic pocket, and brings it to an acceptor membrane or lipid particle.","definition_xrefs":["PMID:20823909","GOC:krc","PMID:25797198","PMID:24220498"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transfer activity","termid":"GO:0120014"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01225":null,"SJAG_03172":null,"SJAG_03721":null,"SJAG_03741":null,"SJAG_03746":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0120013"}],"interesting_parent_ids":["GO:0005215","GO:0120013","GO:0003674"],"is_obsolete":false,"name":"phosphatidylinositol transfer activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-8874470","Reactome:R-HSA-1483229","GO:0120018","Reactome:R-HSA-8869241"],"synonyms":[{"name":"intermembrane phosphatidylinositol transfer activity","type":"narrow"},{"name":"intermembrane phosphotidylinositol transfer activity","type":"narrow"},{"name":"phosphatidylinositol carrier activity","type":"exact"},{"name":"phosphatidylinositol transporter activity","type":"broad"}],"termid":"GO:0008526","terms_by_termid":{"GO:0008526":null}}


id: PBO:0068012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 317","termid":"PBO:0068012"}


id: GO:0042473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the outer ear are generated and organized. The outer ear is the part of the ear external to the tympanum (eardrum). It consists of a tube (the external auditory meatus) that directs sound waves on to the tympanum, and may also include the external pinna, which extends beyond the skull.","definition_xrefs":["ISBN:0192801023","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"ear morphogenesis","termid":"GO:0042471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"outer ear morphogenesis","termid":"GO:0042473"}


id: GO:0001875
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a lipopolysaccharide and transmitting the signal across the cell membrane to initiate an innate immune response. Lipopolysaccharides (LPS) are major components of the outer membrane of Gram-negative bacteria, making them prime targets for recognition by the immune system.","definition_xrefs":["PMID:14609719","PMID:15379975"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern recognition receptor activity","termid":"GO:0038187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"lipopolysaccharide immune receptor activity","synonyms":[{"name":"LPS receptor activity","type":"exact"},{"name":"endotoxin receptor activity","type":"broad"},{"name":"lipopolysaccharide receptor activity","type":"broad"}],"termid":"GO:0001875"}


id: PBO:0055155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2574","termid":"PBO:0055155"}


id: MONDO:0850090
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrosis-neurodegeneration-cerebral angiomatosis syndrome","secondary_identifiers":["Orphanet:621758","GARD:22487"],"termid":"MONDO:0850090","xrefs":{"Monarch":{"xref_id":"0850090"}}}


id: MONDO:0017681
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete erythrokeratoderma variabilis progressiva (obsolete MONDO:0017681)","termid":"MONDO:0017681","xrefs":{"Monarch":{"xref_id":"0017681"}}}


id: FYPO:0008311
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the meiotic spindle pole body during prophase of the first meiotic nuclear division is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to meiotic spindle pole body during meiosis I","termid":"FYPO:0004764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to meiotic spindle pole body during prophase I","termid":"FYPO:0008311"}


id: PBO:0081185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZHX1-C8orf76 readthrough","termid":"PBO:0081185"}


id: PBO:0076195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO2 pseudogene 4","termid":"PBO:0076195"}


id: MONDO:0010480
data:
  {"annotated_genes":["SJAG_02297"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87028],"is_not":false,"summary":null,"term":"MONDO:0010480"}]},"cv_name":"mondo","definition":"Any nonspherocytic hemolytic anemia in which the cause of the disease is a variation in the G6PD gene resulting in severely decreased activity levels of the enzyme glucose-6-phosphate dehydrogenase. Individuals with hemizygous or homozygous G6PD variants associated with chronic nonspherocytic hemolytic anemia (CNSHA) will clinically manifest CNSHA. Individuals with G6PD variants that cause CNSHA are at risk for severe neonatal jaundice and acute exacerbation of their chronic hemolytic anemia in response to certain medication exposures, chemical exposures, infections, or consumption of fava beans.","direct_ancestors":[{"relation_name":"is_a","term_name":"anemia, nonspherocytic hemolytic","termid":"MONDO:0000105"},{"relation_name":"is_a","term_name":"G6PD deficiency","termid":"MONDO:0005775"},{"relation_name":"is_a","term_name":"inborn disorder of pentose phosphate metabolism","termid":"MONDO:0019231"},{"relation_name":"is_a","term_name":"anemia due to erythrocyte enzyme disorder","termid":"MONDO:0020585"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02297":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005066","MONDO:0005570","MONDO:0037792"],"is_obsolete":false,"name":"anemia, nonspherocytic hemolytic, due to G6PD deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:6520","MESH:C567533","OMIM:300908","MEDGEN:403555","Orphanet:466026","UMLS:C2720289"],"synonyms":[{"name":"Class I G6PD deficiency","type":"exact"},{"name":"anemia, congenital, nonspherocytic hemolytic, 1, G6PD deficient","type":"exact"},{"name":"anemia, nonspherocytic hemolytic, due to G6PD deficiency","type":"exact"},{"name":"class I glucose-6-phosphate dehydrogenase deficiency","type":"exact"},{"name":"hemolytic anaemia due to G6PD deficiency","type":"exact"},{"name":"hemolytic anemia due to G6PD deficiency","type":"exact"},{"name":"hemolytic anemia, G6PD deficient (favism), X-linked dominant","type":"exact"},{"name":"severe hemolytic anaemia due to G6PD deficiency","type":"exact"},{"name":"severe hemolytic anemia due to G6PD deficiency","type":"exact"}],"termid":"MONDO:0010480","terms_by_termid":{"MONDO:0010480":null},"xrefs":{"Monarch":{"xref_id":"0010480"}}}


id: PBO:0051676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibitor of growth family, X-linked (pseudogene)","termid":"PBO:0051676"}


id: PBO:0077836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trophoblast glycoprotein","termid":"PBO:0077836"}


id: GO:0098868
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The increase in size or mass of a bone that contributes to the shaping of that bone.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organ growth","termid":"GO:0035265"},{"relation_name":"part_of","term_name":"bone development","termid":"GO:0060348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bone growth","termid":"GO:0098868"}


id: PR:Q09726
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atp25 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09726"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase synthesis protein 25, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31A2.06","synonyms":[{"name":"Spom972h-atp25","type":"exact"}],"termid":"PR:Q09726"}


id: PBO:0119276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial and cytoplasmic cysteine-tRNA ligase Crs1","termid":"PBO:0119276"}


id: PBO:0055991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich transmembrane and O-methyltransferase domain containing","termid":"PBO:0055991"}


id: PR:Q09823
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rec10 gene.","definition_xrefs":["UniProtKB:Q09823","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination protein rec10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25G10.04c","synonyms":[{"name":"Spom972h-rec10","type":"exact"}],"termid":"PR:Q09823"}


id: PBO:0063672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piggyBac transposable element derived 3 pseudogene 1","termid":"PBO:0063672"}


id: GO:0003198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transition where a cardiac epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell that will contribute to the formation of the endocardial cushion.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac epithelial to mesenchymal transition","termid":"GO:0060317"},{"relation_name":"part_of","term_name":"endocardial cushion formation","termid":"GO:0003272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial to mesenchymal transition involved in endocardial cushion formation","termid":"GO:0003198"}


id: PBO:0002935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box/WD repeat protein Pop2","termid":"PBO:0002935"}


id: PBO:0074601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 11B","termid":"PBO:0074601"}


id: GO:0120292
data:
  {"annotated_genes":["SJAG_02214","SJAG_01584","SJAG_03300"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90813,107963,118278],"is_not":false,"summary":null,"term":"GO:0120292"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitotic recombination-dependent replication fork processing. Regulation of mitotic recombination prevents recombination between inappropriate homologous sequences. Proteins involved in homologous recombination are required for replication restart.","definition_xrefs":["PMID:31149897","GOC:krc","PMID:23093942","GOC:mah","PMID:28586299"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA metabolic process","termid":"GO:0051054"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"is_a","term_name":"regulation of mitotic recombination-dependent replication fork processing","termid":"GO:1903221"},{"relation_name":"positively_regulates","term_name":"mitotic recombination-dependent replication fork processing","termid":"GO:1990426"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01584":null,"SJAG_02214":null,"SJAG_03300":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0007049"],"is_obsolete":false,"name":"positive regulation of mitotic recombination-dependent replication fork processing","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of homologous recombination dependent replication fork recovery","type":"related"},{"name":"positive regulation of mitotic recombination involved in replication fork processing","type":"related"},{"name":"positive regulation of recombination-dependent DNA replication","type":"exact"}],"termid":"GO:0120292","terms_by_termid":{"GO:0120292":null}}


id: PBO:0072385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS27A pseudogene 11","termid":"PBO:0072385"}


id: PBO:0042356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD99 molecule like 2","termid":"PBO:0042356"}


id: GO:0001089
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a basal RNA polymerase II transcription factor of the TFIIF class in order to modulate transcription. The transcription factor may or may not also interact selectively with DNA as well.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription factor activity, TFIIF-class transcription factor binding (obsolete GO:0001089)","synonyms":[{"name":"TFIIF-class binding transcription factor activity","type":"exact"}],"termid":"GO:0001089"}


id: PBO:0061908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily A member 2","termid":"PBO:0061908"}


id: MONDO:0100205
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease caused by infection with parainfluenza virus type 4.","definition_xrefs":["PMID:27197630","MONDO:patterns/infectious_disease_by_agent","PMID:21636318"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parainfluenza infectious disease","termid":"MONDO:0100197"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parainfluenza virus type 4 infectious disease","synonyms":[{"name":"human rubulavirus 4 infectious disease","type":"exact"},{"name":"infection caused by human parainfluenza virus 4","type":"exact"},{"name":"infection caused by parainfluenza virus 4","type":"related"},{"name":"infection due to human parainfluenza virus 4","type":"exact"},{"name":"infection due to parainfluenza virus 4","type":"related"}],"termid":"MONDO:0100205","xrefs":{"Monarch":{"xref_id":"0100205"}}}


id: MONDO:0001640
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An spondylitis caused by infection with Neisseria gonorrhoeae.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spondylitis","termid":"MONDO:0003937"},{"relation_name":"is_a","term_name":"gonorrhea","termid":"MONDO:0004277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gonococcal spondylitis","secondary_identifiers":["DOID:13127","icd11.foundation:1439203351","MEDGEN:509212","SCTID:53664003","UMLS:C0153219","ICD9:098.53"],"termid":"MONDO:0001640","xrefs":{"Monarch":{"xref_id":"0001640"}}}


id: FYPO:0004359
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which cell cycle regulation mediated by the mitotic cell cycle DNA replication checkpoint does not occur under conditions that normally trigger the checkpoint signaling and response. The DNA replication checkpoint normally prevents the initiation of mitosis until DNA replication is complete.","definition_xrefs":["PomBase:mah","PMID:11988741","GO:0033314"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle DNA replication checkpoint","termid":"FYPO:0000173"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0000631","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished mitotic cell cycle DNA replication checkpoint","termid":"FYPO:0004359"}


id: PATO:0001930
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue the bearer's having or exhibiting variation its shape.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variability of shape","termid":"PATO:0001929"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variant shape","termid":"PATO:0001930"}


id: MONDO:1010623
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Situs inversus that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"situs inversus, non-human animal","termid":"MONDO:1010068"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"situs inversus, horse","secondary_identifiers":["OMIA:001102-9796"],"termid":"MONDO:1010623","xrefs":{"Monarch":{"xref_id":"1010623"}}}


id: PBO:0120035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiolipin synthase/ hydrolase fusion protein Crd1 OR mitochondrial hydrolase, N-terminal portion of Crd1 fusion protein","termid":"PBO:0120035"}


id: GO:0110100
data:
  {"annotated_genes":["SJAG_00794","SJAG_00773","SJAG_04745"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97127],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140456"},{"annotations":[97128,77558,79559],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000073"}]},"cv_name":"biological_process","definition":"The release of duplicated spindle pole bodies (SPBs) and their migration away from each other within the nuclear membrane. Duplicated SPBs are connected by a bridge structure that is severed in order to release the SPBs from one another. Following liberation, SPBs diffuse through the nuclear membrane until they are across from each other. SPB separation must take place in order for a bipolar spindle to assemble.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"part_of","term_name":"spindle pole body organization","termid":"GO:0051300"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00773":null,"SJAG_00794":null,"SJAG_04745":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0007010","GO:0000226","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"spindle pole body separation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0110100","terms_by_termid":{"GO:0000073":null,"GO:0140456":null}}


id: GO:0061215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a nephron in the mesonephros over time, from its formation to the mature structure. A nephron is the functional unit of the kidney.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron development","termid":"GO:0072006"},{"relation_name":"part_of","term_name":"mesonephros development","termid":"GO:0001823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric nephron development","termid":"GO:0061215"}


id: GO:0015406
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete ABC-type uptake permease activity (obsolete GO:0015406)","synonyms":[{"name":"ABC-type uptake permease activity","type":"exact"}],"termid":"GO:0015406"}


id: PBO:0031106
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_ionizing_radiation_during_vegetative_growth","termid":"PBO:0031106"}


id: PBO:0028140
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_18S_rRNA_level","termid":"PBO:0028140"}


id: PBO:0055374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2803","termid":"PBO:0055374"}


id: GO:1904286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein-pyridoxal-5-phosphate linkage.","definition_xrefs":["PMID:25957689","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein modification process","termid":"GO:0031400"},{"relation_name":"is_a","term_name":"regulation of protein-pyridoxal-5-phosphate linkage","termid":"GO:1904285"},{"relation_name":"negatively_regulates","term_name":"protein-pyridoxal-5-phosphate linkage","termid":"GO:0018352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein-pyridoxal-5-phosphate linkage","synonyms":[{"name":"down regulation of protein-pyridoxal-5-phosphate linkage","type":"exact"},{"name":"down-regulation of protein-pyridoxal-5-phosphate linkage","type":"exact"},{"name":"downregulation of protein-pyridoxal-5-phosphate linkage","type":"exact"},{"name":"inhibition of protein-pyridoxal-5-phosphate linkage","type":"narrow"}],"termid":"GO:1904286"}


id: GO:0046738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The intentional, virally-encoded stimulation of an innate host defense response to viral infection.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete induction of innate immune response in host by virus (obsolete GO:0046738)","synonyms":[{"name":"active induction of innate immune response in host by virus","type":"related"},{"name":"active viral induction of innate immune response in host","type":"exact"}],"termid":"GO:0046738"}


id: MONDO:1010862
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lysosomal storage disease that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal storage disease, non-human animal","termid":"MONDO:1010171"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysosomal storage disease, cattle","secondary_identifiers":["OMIA:000616-9913"],"termid":"MONDO:1010862","xrefs":{"Monarch":{"xref_id":"1010862"}}}


id: PBO:0053659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 836","termid":"PBO:0053659"}


id: MONDO:0010334
data:
  {"annotated_genes":["SJAG_03244"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88058],"is_not":false,"summary":null,"term":"MONDO:0010334"}]},"cv_name":"mondo","definition":"Severe motor and intellectual disabilities-sensorineural deafness-dystonia syndrome is a rare genetic neurological disorder characterized by intrauterine growth retardation, failure to thrive, infantile onset of sensorineural deafness, severe global developmental delay or absent psychomotor development, paraplegia or quadriplegia with dystonia and pyramidal signs, microcephaly, ocular abnormalities (strabismus, optic atrophy), mildly dysmorphic features (deep-set eyes, prominent nasal bridge, micrognathia), seizures and abnormalities of brain morphology (hypomyelinating white matter changes, cerebral atrophy).","definition_xrefs":["Orphanet:369939"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndrome caused by partial chromosomal deletion","termid":"MONDO:0000761"},{"relation_name":"is_a","term_name":"inherited dystonia","termid":"MONDO:0044807"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03244":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"severe motor and intellectual disabilities-sensorineural deafness-dystonia syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0112123","MESH:C564508","MEDGEN:812964","GARD:17592","OMIM:300475","UMLS:C3806634"],"synonyms":[{"name":"DDCH","type":"related"},{"name":"contiguous ABCD1/Dxs1375E deletion syndrome","type":"related"},{"name":"deafness, dystonia, and cerebral hypomyelination","type":"related"},{"name":"deafness, dystonia, and cerebral hypomyelination, X-linked recessive","type":"exact"}],"termid":"MONDO:0010334","terms_by_termid":{"MONDO:0010334":null},"xrefs":{"Monarch":{"xref_id":"0010334"}}}


id: MONDO:0026777
data:
  {"annotated_genes":["SJAG_00853"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87681],"is_not":false,"summary":null,"term":"MONDO:0026777"}]},"cv_name":"mondo","definition":"An adult-onset inflammatory disease that affects only males and is caused by somatic, not germline, mutations. The disorder is characterized by adult onset of rheumatologic symptoms at a mean age of 64 years. Features include recurrent fevers, pulmonary and dermatologic inflammatory manifestations, vasculitis, deep vein thrombosis, arthralgias, and ear and nose chondritis. Laboratory studies indicate hematologic abnormalities, including macrocytic anemia, as well as increased levels of acute-phase reactants; about half of patients have positive autoantibodies. Bone marrow biopsy shows degenerative vacuolization restricted to myeloid and erythroid precursor cells, as well as variable hematopoietic dyspoiesis and dysplasias. The condition does not respond to rheumatologic medications and the features may result in premature death.","definition_xrefs":["OMIM:301054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoinflammatory syndrome","termid":"MONDO:0019751"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00853":null},"genotype_count":0,"is_obsolete":false,"name":"VEXAS syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1765785","Orphanet:596753","DOID:0080828","NCIT:C181924","UMLS:C5435753","GARD:15001"],"synonyms":[{"name":"VEXAS","type":"exact"},{"name":"VEXAS syndrome, somatic","type":"exact"},{"name":"vacuoles, E1 enzyme, X-linked, autoinflammatory, somatic syndrome","type":"exact"}],"termid":"MONDO:0026777","terms_by_termid":{"MONDO:0026777":null},"xrefs":{"Monarch":{"xref_id":"0026777"}}}


id: PBO:0058941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial matrix import factor 23","termid":"PBO:0058941"}


id: PR:P87169
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitotic spindle assembly checkpoint protein MAD1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02796","PANTHER:PTHR23168:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle assembly checkpoint component mad1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3D6.04c","secondary_identifiers":["UniProtKB:P87169"],"synonyms":[{"name":"SPBC3D6.04c","type":"related"},{"name":"Spom972h-MAD1L1","type":"exact"},{"name":"mitotic arrest deficient protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87169"}


id: MOD:01758
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a threonine residue with the Proteome Sciences TMT6plex-130 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent O-acylated residue","termid":"MOD:01719"},{"relation_name":"is_a","term_name":"TMT6plex-130 reporter+balance reagent acylated residue","termid":"MOD:01752"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex-130 reporter+balance reagent O3-acylated threonine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01758"}


id: MONDO:0017767
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A post-bacterial multisystem inflammatory disease occurring as a post-infectious, nonsuppurative sequela of untreated streptococcus pyogenes (Group A streptococcus [GAS]) pharyngitis, and mainly occurs in individuals aged 5 to 15 years. The most common presenting signs are fever, migratory polyarthritis and carditis.","definition_xrefs":["Orphanet:3099"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"connective tissue disorder","termid":"MONDO:0003900"},{"relation_name":"excluded_subClassOf","term_name":"bacterial infectious disease","termid":"MONDO:0005113"},{"relation_name":"excluded_subClassOf","term_name":"skeletal system disorder","termid":"MONDO:0005172"},{"relation_name":"is_a","term_name":"rheumatic disorder","termid":"MONDO:0005554"},{"relation_name":"is_a","term_name":"post-bacterial disorder","termid":"MONDO:0021673"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rheumatic fever","secondary_identifiers":["DOID:1586","GARD:5699","ICD10CM:I00-I02","MedDRA:10039054","MESH:D012213","ICD9:390","EFO:1001160","NCIT:C34984","NORD:1668","SCTID:58718002","SCTID:81077008","ICD9:390-392","MEDGEN:48448","UMLS:C0035436"],"synonyms":[{"name":"ARF","type":"exact"},{"name":"RHF - rheumatic fever","type":"exact"},{"name":"acute rheumatic fever","type":"exact"},{"name":"inflammatory rheumatism","type":"related"}],"termid":"MONDO:0017767","xrefs":{"Monarch":{"xref_id":"0017767"}}}


id: MONDO:1012492
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neurodegenerative vacuolar storage disease, non-human animal","termid":"MONDO:1011893"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurodegenerative vacuolar storage disease, dog","secondary_identifiers":["OMIA:001954-9615"],"termid":"MONDO:1012492","xrefs":{"Monarch":{"xref_id":"1012492"}}}


id: MONDO:0012741
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial prostate cancer in which the cause of the disease is a mutation in the EHBP1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostate cancer, hereditary","termid":"MONDO:0700275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"prostate cancer, hereditary, 12","secondary_identifiers":["MESH:C567510","UMLS:C2678479","OMIM:611868","MEDGEN:437216","GARD:15529"],"synonyms":[{"name":"EHBP1 familial prostate cancer","type":"exact"},{"name":"HPC12","type":"related"},{"name":"familial prostate cancer caused by mutation in EHBP1","type":"exact"},{"name":"prostate cancer, hereditary, 12","type":"exact"},{"name":"prostate cancer, hereditary, type 12","type":"exact"}],"termid":"MONDO:0012741","xrefs":{"Monarch":{"xref_id":"0012741"}}}


id: MONDO:0010636
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kallmann syndrome with spastic paraplegia","secondary_identifiers":["UMLS:C1839911","MESH:C536873","OMIM:308750","MEDGEN:333437"],"synonyms":[{"name":"Kallmann syndrome with spastic paraplegia","type":"exact"},{"name":"spastic paraplegia-Kallmann syndrome","type":"related"}],"termid":"MONDO:0010636","xrefs":{"Monarch":{"xref_id":"0010636"}}}


id: MONDO:0014237
data:
  {"annotated_genes":["SJAG_04558","SJAG_01538"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87592,87593],"is_not":false,"summary":null,"term":"MONDO:0014237"}]},"cv_name":"mondo","definition":"Any autosomal recessive nonsyndromic deafness in which the cause of the disease is a mutation in the SYNE4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01538":null,"SJAG_04558":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019497"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 76","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:22650","OMIM:615540","MEDGEN:811137","DOID:0110524","UMLS:C3147083"],"synonyms":[{"name":"DFNB76","type":"narrow"},{"name":"SYNE4 autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"autosomal recessive deafness 76","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 76","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in SYNE4","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 76","type":"narrow"},{"name":"autosomal recessive nonsyndromic hearing loss 76","type":"exact"},{"name":"deafness, autosomal recessive 76","type":"narrow"},{"name":"deafness, autosomal recessive type 76","type":"narrow"}],"termid":"MONDO:0014237","terms_by_termid":{"MONDO:0014237":null},"xrefs":{"Monarch":{"xref_id":"0014237"}}}


id: PBO:0089899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial serine-tRNA ligase","termid":"PBO:0089899"}


id: PBO:0003307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper chaperone Sco1 (predicted)","termid":"PBO:0003307"}


id: PBO:0067879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 181","termid":"PBO:0067879"}


id: GO:0042249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Coordinated organization of groups of cells in the plane of an embryonic epithelium, such that they all orient to similar coordinates.","definition_xrefs":["GOC:tb","GOC:dph","GOC:ascb_2009","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of planar polarity","termid":"GO:0001736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of planar polarity of embryonic epithelium","termid":"GO:0042249"}


id: PBO:0034398
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-requires_regulator_(obsolete_requires_regulator)","termid":"PBO:0034398"}


id: GO:0061583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a colon epithelial cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis).","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell chemotaxis","termid":"GO:0060326"},{"relation_name":"is_a","term_name":"colon epithelial cell migration","termid":"GO:0061580"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"colon epithelial cell chemotaxis","termid":"GO:0061583"}


id: MONDO:0016422
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, endocrine disease characterized by autoimmune thyroid disease associated with at least one other autoimmune disease, such as type I diabetes mellitus, chronic atrophic gastritis, pernicious anemia, vitiligo, alopecia, or myasthenia gravis, but excluding Addison disease.","definition_xrefs":["Orphanet:227982"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"type 1 diabetes mellitus","termid":"MONDO:0005147"},{"relation_name":"is_a","term_name":"autoimmune polyendocrinopathy","termid":"MONDO:0017278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"autoimmune polyendocrinopathy type 3","secondary_identifiers":["UMLS:C1535942","MEDGEN:453060","ICD9:258.1","SCTID:449731009","GARD:10980","icd11.foundation:1361747293"],"synonyms":[{"name":"APS type 3","type":"exact"},{"name":"APS3","type":"exact"},{"name":"PAS3","type":"related"},{"name":"autoimmune polyendocrine syndrome type 3","type":"exact"},{"name":"autoimmune polyglandular syndrome type 3","type":"exact"},{"name":"polyglandular autoimmune syndrome type 3","type":"related"}],"termid":"MONDO:0016422","xrefs":{"Monarch":{"xref_id":"0016422"}}}


id: PBO:0027075
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_mislocalized_to_cytoplasm","termid":"PBO:0027075"}


id: PR:O94584
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pps1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94584"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDP-diacylglycerol--serine O-phosphatidyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1442.12","synonyms":[{"name":"Spom972h-pps1","type":"exact"},{"name":"phosphatidylserine synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94584"}


id: GO:0050786
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a RAGE receptor, the receptor for advanced glycation end-products.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"RAGE receptor binding","synonyms":[{"name":"advanced glycation end-product receptor binding","type":"exact"}],"termid":"GO:0050786"}


id: PBO:0002206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PI31 proteasome inhibitor (predicted)","termid":"PBO:0002206"}


id: PBO:0034664
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_mitotic_cohesin_loading","termid":"PBO:0034664"}


id: GO:0051995
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group to the selenium atom of an acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"Se-methyltransferase activity","termid":"GO:0051995"}


id: PBO:0064810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP1R2C family member C","termid":"PBO:0064810"}


id: PBO:0057594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 924","termid":"PBO:0057594"}


id: GO:0042487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the formation and development of teeth, the hard, bony appendages which are borne on the jaws, or on other bones in the walls of the mouth or pharynx of most vertebrates.","definition_xrefs":["GOC:jl","GOC:mtg_sensu","PMID:15355794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of odontogenesis","termid":"GO:0042481"},{"relation_name":"regulates","term_name":"odontogenesis of dentin-containing tooth","termid":"GO:0042475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of odontogenesis of dentin-containing tooth","synonyms":[{"name":"regulation of odontogenesis of dentine-containing teeth","type":"exact"},{"name":"regulation of odontogenesis of dentine-containing tooth","type":"exact"}],"termid":"GO:0042487"}


id: MONDO:0000137
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukoencephalopathy, megalencephalic","secondary_identifiers":["OMIMPS:604004"],"termid":"MONDO:0000137","xrefs":{"Monarch":{"xref_id":"0000137"}}}


id: PBO:0013439
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor Overexpression Elongated","termid":"PBO:0013439"}


id: FYPO:0001939
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of ubiquinol-cytochrome-c reductase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"},{"relation_name":"is_a","term_name":"abnormal transmembrane transporter activity","termid":"FYPO:0002116"},{"relation_name":"is_a","term_name":"abnormal proton transport","termid":"FYPO:0005971"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0002114"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0005447","FYPO:0000138","FYPO:0002114","FYPO:0000707","FYPO:0001985","FYPO:0000654","FYPO:0000002","FYPO:0000652"],"is_obsolete":false,"name":"abnormal ubiquinol-cytochrome-c reductase activity","termid":"FYPO:0001939"}


id: PBO:0056493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyl-CpG binding domain protein 1","termid":"PBO:0056493"}


id: FYPO:0001116
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to hydrogen peroxide is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during cellular response to oxidative stress","termid":"FYPO:0001280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"decreased RNA level during cellular response to hydrogen peroxide","synonyms":[{"name":"decreased RNA accumulation during cellular response to hydrogen peroxide","type":"related"},{"name":"decreased RNA level during cellular response to H2O2","type":"exact"},{"name":"decreased RNA level during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"decreased mRNA level during cellular response to hydrogen peroxide","type":"narrow"},{"name":"decreased transcript level during cellular response to hydrogen peroxide","type":"exact"},{"name":"reduced RNA level during cellular response to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0001116"}


id: PBO:0062070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 1 pseudogene","termid":"PBO:0062070"}


id: PBO:0039489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 20 family member A12, pseudogene","termid":"PBO:0039489"}


id: PBO:0018213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal small subunit Var1","termid":"PBO:0018213"}


id: PBO:0070828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 7","termid":"PBO:0070828"}


id: PBO:0087343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spermine synthase; required for the biosynthesis of spermine and also involved in biosynthesis of pantothenic acid","termid":"PBO:0087343"}


id: PBO:0044028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CS pseudogene 2","termid":"PBO:0044028"}


id: PBO:0002641
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.71","termid":"PBO:0002641"}


id: GO:0007072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription as the cell leaves M phase. M phase is the part of the mitotic cell cycle during which mitosis and cytokinesis take place.","definition_xrefs":["GOC:tb","GOC:dph","GOC:isa_complete"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription involved in exit from mitosis (obsolete GO:0007072)","synonyms":[{"name":"activation of transcription on exit from mitosis","type":"narrow"}],"termid":"GO:0007072"}


id: PBO:0027914
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_level_during_cellular_response_to_hydroxyurea","termid":"PBO:0027914"}


id: FYPO:0007149
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing N-methyl-N'-nitro-N-nitrosoguanidine (MNNG).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000139","FYPO:0000003","FYPO:0002060","FYPO:0000257","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on N-methyl-N'-nitro-N-nitrosoguanidine","synonyms":[{"name":"normal cell population growth in presence of N-methyl-N'-nitro-N-nitrosoguanidine","type":"exact"},{"name":"normal cell population growth on MNNG","type":"exact"},{"name":"normal cell population growth on N-methyl-N'-nitro-N-nitrosoguanidine","type":"exact"},{"name":"normal vegetative cell population growth on N-methyl-N'-nitro-N-nitrosoguanidine","type":"exact"}],"termid":"FYPO:0007149"}


id: PBO:0038988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adrenoceptor beta 2","termid":"PBO:0038988"}


id: MONDO:0004696
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A in situ carcinoma that involves the larynx.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laryngeal carcinoma","termid":"MONDO:0002358"},{"relation_name":"is_a","term_name":"in situ carcinoma","termid":"MONDO:0004647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"larynx carcinoma in situ","secondary_identifiers":["ICD10CM:D02.0","ICD9:231.0","SCTID:92634009","DOID:9011","NCIT:C9100","MEDGEN:56336","UMLS:C0154069"],"synonyms":[{"name":"carcinoma in situ of larynx","type":"exact"},{"name":"carcinoma in situ of the larynx","type":"exact"},{"name":"laryngeal cancer stage 0","type":"exact"},{"name":"laryngeal carcinoma in situ","type":"exact"},{"name":"laryngeal carcinoma stage 0","type":"exact"},{"name":"larynx carcinoma in situ","type":"exact"},{"name":"larynx in situ carcinoma","type":"exact"},{"name":"stage 0 carcinoma of larynx","type":"exact"},{"name":"stage 0 carcinoma of the larynx","type":"exact"},{"name":"stage 0 laryngeal cancer","type":"exact"},{"name":"stage 0 laryngeal cancer aJCC v6","type":"exact"},{"name":"stage 0 laryngeal cancer aJCC v6, v7, and V8","type":"exact"},{"name":"stage 0 laryngeal cancer aJCC v7","type":"exact"},{"name":"stage 0 laryngeal cancer aJCC v8","type":"exact"},{"name":"stage 0 laryngeal carcinoma","type":"exact"},{"name":"stage 0 laryngeal carcinoma in situ","type":"exact"},{"name":"stage 0 laryngeal throat cancer","type":"exact"},{"name":"stage 0 larynx carcinoma","type":"exact"}],"termid":"MONDO:0004696","xrefs":{"Monarch":{"xref_id":"0004696"}}}


id: MONDO:0004826
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A concretion in the urethra.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urethral disorder","termid":"MONDO:0004184"},{"relation_name":"is_a","term_name":"lower urinary tract calculus","termid":"MONDO:0004828"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urethral calculus","secondary_identifiers":["DOID:9589","ICD9:594.2","UMLS:C0162301","MEDGEN:57664","SCTID:20342001"],"synonyms":[{"name":"urethra urolithiasis","type":"exact"},{"name":"urethral Stone","type":"exact"},{"name":"urolithiasis of urethra","type":"exact"}],"termid":"MONDO:0004826","xrefs":{"Monarch":{"xref_id":"0004826"}}}


id: PBO:0064221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase C delta 3","termid":"PBO:0064221"}


id: GO:0035342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of inosine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of purine nucleoside transport","termid":"GO:0032248"},{"relation_name":"is_a","term_name":"regulation of inosine transport","termid":"GO:0035341"},{"relation_name":"positively_regulates","term_name":"inosine transport","termid":"GO:0035340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of inosine transport","synonyms":[{"name":"positive regulation of hypoxanthine riboside transport","type":"exact"}],"termid":"GO:0035342"}


id: PBO:0047940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(13)(q32)","termid":"PBO:0047940"}


id: GO:2001147
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to camalexin.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"camalexin binding","synonyms":[{"name":"3-(1,3-thiazol-2-yl)-1H-indole binding","type":"exact"}],"termid":"GO:2001147"}


id: PBO:0045139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal assembly factor 8","termid":"PBO:0045139"}


id: GO:0019024
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A viral genome composed of single stranded RNA of either positive or negative sense.","definition_xrefs":["ISBN:0121585336"],"gene_count":0,"genotype_count":0,"name":"obsolete ssRNA viral genome (obsolete GO:0019024)","termid":"GO:0019024"}


id: PBO:0089300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinone biosynthesis protein Coq9","termid":"PBO:0089300"}


id: PBO:0050035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DR beta 3","termid":"PBO:0050035"}


id: PBO:0069394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 654, pseudogene","termid":"PBO:0069394"}


id: GO:0033602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of dopamine.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of dopamine secretion","termid":"GO:0014059"},{"relation_name":"is_a","term_name":"negative regulation of catecholamine secretion","termid":"GO:0033604"},{"relation_name":"negatively_regulates","term_name":"dopamine secretion","termid":"GO:0014046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of dopamine secretion","synonyms":[{"name":"down regulation of dopamine secretion","type":"exact"},{"name":"down-regulation of dopamine secretion","type":"exact"},{"name":"downregulation of dopamine secretion","type":"exact"},{"name":"inhibition of dopamine secretion","type":"narrow"}],"termid":"GO:0033602"}


id: PBO:0082920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytochrome c, isoform 1; also known as iso-1-cytochrome c; electron carrier of mitochondrial intermembrane space that transfers electrons from ubiquinone-cytochrome c oxidoreductase to cytochrome c oxidase during cellular respiration; CYC1 has a paralog, CYC7, that arose from the whole genome duplication; human homolog CYC1 can complement yeast null mutant; mutations in human CYC1 cause insulin-responsive hyperglycemia","termid":"PBO:0082920"}


id: PBO:0018066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threonine ammonia-lyase Tda1","termid":"PBO:0018066"}


id: PBO:0075362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SOX2 overlapping transcript","termid":"PBO:0075362"}


id: MOD:01617
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to O-(6-phosphomannosyl)-L-threonine.","definition_xrefs":["PubMed:20044576","RESID:AA0514"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-glycosyl-L-threonine","termid":"MOD:00005"},{"relation_name":"is_a","term_name":"mannosylated residue","termid":"MOD:00595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"O-(6-phosphomannosyl)-L-threonine","synonyms":[{"name":"(2S,3R)-2-amino-3-[6-phosphonooxy-alpha-D-mannopyranosyloxy]butanoic acid","type":"exact"},{"name":"CARBOHYD O-linked (Man6P) threonine","type":"exact"},{"name":"O-(6-phosphomannosyl)-L-threonine","type":"exact"},{"name":"O3-(6-phosphomannosyl)threonine","type":"exact"}],"termid":"MOD:01617"}


id: PBO:0059105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MORN repeat containing 1","termid":"PBO:0059105"}


id: GO:0044229
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region between the inner (cytoplasmic) and outer host membrane (Gram-negative Bacteria) or inner host membrane and host cell wall (Fungi).","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell part","termid":"GO:0033643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell periplasmic space","termid":"GO:0044229"}


id: PBO:0046551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group H member 5","termid":"PBO:0046551"}


id: GO:0006821
data:
  {"annotated_genes":["SJAG_01168","SJAG_03401","SJAG_02463"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78969,72159,75153],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902476"}]},"cv_name":"biological_process","definition":"The directed movement of chloride into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic anion transport","termid":"GO:0006820"},{"relation_name":"is_a","term_name":"inorganic anion transport","termid":"GO:0015698"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01168":null,"SJAG_02463":null,"SJAG_03401":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"chloride transport","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0006821","terms_by_termid":{"GO:1902476":null}}


id: GO:1904301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of maternal process involved in parturition.","definition_xrefs":["PMID:1849751","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"maternal process involved in parturition","termid":"GO:0060137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of maternal process involved in parturition","termid":"GO:1904301"}


id: PBO:0084977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH-dependent aldehyde reductase; involved in detoxification of furfural; expression is upregulated in cells treated with the aldehydes furfural and glycolaldehyde, the mycotoxin patulin, and also the quinone methide triterpene celastrol; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm","termid":"PBO:0084977"}


id: FYPO:0005771
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H2A phosphorylation occurs to a greater extent than normal in regions where nucleosomes are depleted. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may be increased.","definition_xrefs":["PMID:27611590","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H2A phosphorylation during vegetative growth","termid":"FYPO:0002596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0002494"],"is_obsolete":false,"name":"increased histone H2A phosphorylation at nucleosome-depleted regions during vegetative growth","synonyms":[{"name":"increased histone H2A phosphorylation at nucleosome-depleted regions during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005771"}


id: PBO:0082418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bifunctional HMG aldolase/oxaloacetate decarboxylase; requires divalent metal ions for activity; competitively inhibited by oxalate; forms a ring-shaped homotrimer; similar to members of the prokaryotic RraA family of class II (divalent metal ion dependent) pyruvate aldolases from the meta cleavage pathways of protocatechuate and gallate","termid":"PBO:0082418"}


id: GO:0097255
data:
  {"annotated_genes":["SJAG_04355","SJAG_03036"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[74665,78032],"is_not":false,"summary":null,"term":"GO:0097255"}]},"cv_name":"cellular_component","definition":"A highly conserved protein complex comprised of two ATP-dependent DNA helicases (Rvb1p and Rvb2p in yeast, Pontin52 and Reptin52 in humans), Pih1p in yeast or PIH1D1 in humans, and Tah1 in yeast or RPAP3 in humans. The complex associates with Hsp90 and is thought to have a role in assembly of large protein or protein/nucleic acid complexes. In this role it is involved in multiple processes such as box C/D snoRNP biogenesis, phosphatidylinositol-3 kinase-related protein kinase (PIKK) signaling, RNA polymerase II assembly, and others.","definition_xrefs":["GOC:mcc","PMID:21925213","PMID:15766533"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03036":null,"SJAG_04355":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"R2TP complex","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0097255","terms_by_termid":{"GO:0097255":null}}


id: GO:0000052
data:
  {"annotated_genes":["SJAG_00635"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80233],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019240"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving citrulline, N5-carbamoyl-L-ornithine, an alpha amino acid not found in proteins.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"},{"relation_name":"is_a","term_name":"alpha-amino acid metabolic process","termid":"GO:1901605"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"citrulline metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"citrulline metabolism","type":"exact"}],"termid":"GO:0000052","terms_by_termid":{"GO:0019240":null}}


id: PBO:0071834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 29","termid":"PBO:0071834"}


id: PBO:0059708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 16","termid":"PBO:0059708"}


id: GO:0033214
data:
  {"annotated_genes":["SJAG_02834","SJAG_02735","SJAG_03667"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62621,62948,71055],"is_not":false,"summary":null,"term":"GO:0033214"}]},"cv_name":"biological_process","definition":"A process in which iron (Fe3+) is solubilized by ferric iron-specific chelators, known as siderophores is imported into the cell by transmembrane transport or endocytosis.","definition_xrefs":["GOC:vw","PMID:16963626"],"direct_ancestors":[{"relation_name":"is_a","term_name":"import into cell","termid":"GO:0098657"},{"relation_name":"is_a","term_name":"siderophore-dependent iron import pathway","termid":"GO:0180060"},{"relation_name":"is_a","term_name":"iron coordination entity transport","termid":"GO:1901678"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02735":null,"SJAG_02834":null,"SJAG_03667":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0098771","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"siderophore-iron import into cell","references_by_uniquename":{"GO_REF:0000108":null},"secondary_identifiers":["GO:0015688","Reactome:R-HSA-1222449","GO:0033213"],"synonyms":[{"name":"iron assimilation by chelation and transport","type":"exact"}],"termid":"GO:0033214","terms_by_termid":{"GO:0033214":null}}


id: GO:0060581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells within a field of cells that will exhibit a certain pattern of differentiation. Positional information is established through protein signals that emanate from a localized source within a developmental field resulting in specification of a cell type. Those signals are then interpreted in a cell-autonomous manner resulting in the determination of the cell type.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"pattern specification process","termid":"GO:0007389"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell fate commitment involved in pattern specification","termid":"GO:0060581"}


id: GO:0071756
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A circulating form of IgM consisting of a pentamer of IgM core units with a single J chain polypeptide.","definition_xrefs":["PMID:20176268","ISBN:0781765196","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"IgM immunoglobulin complex, circulating","termid":"GO:0071754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0032991","GO:0005576","GO:0005575"],"is_obsolete":false,"name":"pentameric IgM immunoglobulin complex","synonyms":[{"name":"pentameric IgM antibody","type":"exact"}],"termid":"GO:0071756"}


id: MONDO:0003724
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Breast fibrocystic change characterized by the absence of epithelial cell hyperplasia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast fibrocystic disease","termid":"MONDO:0005219"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-proliferative fibrocystic change of the breast","secondary_identifiers":["DOID:5997","NCIT:C6943","MEDGEN:231966","UMLS:C1332628"],"synonyms":[{"name":"breast fibrocystic change, non-proliferative type","type":"exact"},{"name":"non-proliferative fibrocystic change","type":"exact"},{"name":"non-proliferative fibrocystic change of breast","type":"exact"}],"termid":"MONDO:0003724","xrefs":{"Monarch":{"xref_id":"0003724"}}}


id: PBO:0026700
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cell_population_growth_on_glutamine_nitrogen_source","termid":"PBO:0026700"}


id: GO:1901847
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving nicotinate.","definition_xrefs":["UniPathway:UPA00830","GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkaloid metabolic process","termid":"GO:0009820"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"pyridine-containing compound metabolic process","termid":"GO:0072524"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"nicotinate metabolic process","synonyms":[{"name":"nicotinate metabolism","type":"exact"}],"termid":"GO:1901847"}


id: _global:parasitized_by
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"host_of","termid":"_global:host_of"},{"relation_name":"is_a","term_name":"interacts_with_via_parasite-host_interaction","termid":"_global:interacts_with_via_parasite-host_interaction"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parasitized_by","secondary_identifiers":["RO:0002445"],"synonyms":[{"name":"directly parasitized by","type":"exact"}],"termid":"_global:parasitized_by"}


id: PBO:0042550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDK13 divergent transcript","termid":"PBO:0042550"}


id: MONDO:0015410
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cysts and fistulae of the face and oral cavity","termid":"MONDO:0015476"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nasal dorsum fistula/cyst","secondary_identifiers":["MEDGEN:573381","GARD:19963","UMLS:C0339853","Orphanet:141219"],"termid":"MONDO:0015410","xrefs":{"Monarch":{"xref_id":"0015410"}}}


id: PBO:0050626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock transcription factor 1","termid":"PBO:0050626"}


id: PBO:0065585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prothymosin alpha pseudogene 1","termid":"PBO:0065585"}


id: MONDO:0000538
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete spindle epithelial tumor with thymus-like differentiation tumor (obsolete MONDO:0000538)","termid":"MONDO:0000538","xrefs":{"Monarch":{"xref_id":"0000538"}}}


id: MONDO:0006475
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A renal cell carcinoma characterized by morphologic features that do not fit easily into one of the other well-defined categories of renal cell carcinoma. Examples of such features include mixtures of morphologic patterns, mucin production, and sarcomatoid morphology.","definition_xrefs":["NCIT:C27892"],"gene_count":0,"genotype_count":0,"name":"obsolete unclassified renal cell carcinoma (obsolete MONDO:0006475)","secondary_identifiers":["ONCOTREE:URCC"],"synonyms":[{"name":"URCC","type":"related"},{"name":"unclassified renal cell cancer","type":"exact"},{"name":"unclassified renal cell carcinoma","type":"exact"}],"termid":"MONDO:0006475","xrefs":{"Monarch":{"xref_id":"0006475"}}}


id: GO:0047781
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + citrulline = NH3 + CO2 + L-ornithine.","definition_xrefs":["EC:3.5.1.20","MetaCyc:CITRULLINASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016787","GO:0016810","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"citrullinase activity","secondary_identifiers":["RHEA:11940"],"synonyms":[{"name":"L-citrulline 5-N-carbamoyldihydrolase activity","type":"related"},{"name":"L-citrulline N5-carbamoyldihydrolase activity","type":"related"},{"name":"citrulline hydrolase activity","type":"related"},{"name":"citrulline ureidase activity","type":"related"}],"termid":"GO:0047781"}


id: PBO:0091918
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FrataXiN","termid":"PBO:0091918"}


id: GO:0016768
data:
  {"annotated_genes":["SJAG_04481"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104581],"is_not":false,"summary":null,"term":"GO:0016768"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosylmethioninamine + spermidine = 5'-methylthioadenosine + spermine.","definition_xrefs":["EC:2.5.1.22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04481":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016765","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"spermine synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:19973","Reactome:R-HSA-351210","MetaCyc:SPERMINE-SYNTHASE-RXN"],"synonyms":[{"name":"S-adenosylmethioninamine:spermidine 3-aminopropyltransferase activity","type":"related"},{"name":"spermidine aminopropyltransferase activity","type":"related"},{"name":"spermine synthetase activity","type":"related"}],"termid":"GO:0016768","terms_by_termid":{"GO:0016768":null}}


id: PBO:0017451
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-output_of","termid":"PBO:0017451"}


id: MONDO:0010303
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete colobomatous microphthalmia (obsolete MONDO:0010303)","termid":"MONDO:0010303","xrefs":{"Monarch":{"xref_id":"0010303"}}}


id: GO:0015004
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete small blue copper electron carrier (obsolete GO:0015004)","synonyms":[{"name":"small blue copper electron carrier","type":"exact"}],"termid":"GO:0015004"}


id: MONDO:0007896
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute monoblastic leukemia (AML-M5), is one of the most common subtypes of acute myeloid leukemia (AML) that is either comprised of more than 80% of monoblasts (AML-M5a) or 30-80% monoblasts with (pro)monocytic differentiation (AML-M5b). AML-M5 presents with asthenia, pallor, fever, and dizziness. Specific features of AML-M5 include hyperleukocytosis, propensity for extramedullary infiltrates, coagulation abnormalities including disseminated intravascular coagulation and neurological disorders. Leukemia cutis and gingival infiltration can also be seen. A characteristic translocation observed in AML-M5 is t(9;11).","definition_xrefs":["Orphanet:514"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"bilineal acute myeloid leukemia","termid":"MONDO:0011118"},{"relation_name":"is_a","term_name":"monocytic leukemia","termid":"MONDO:0004600"},{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"acute monocytic leukemia","secondary_identifiers":["EFO:0000221","CSP:2004-2820","ICD9:206.0","MedDRA:10000871","NANDO:2200008","GARD:525","icd11.foundation:517546180","ICD10CM:C93.0","OMIM:151380","MESH:D007948","ICDO:9891/3","UMLS:C0023465","NCIT:C4861","MEDGEN:7319","DOID:8864","MedDRA:10059439","NANDO:2200009","ONCOTREE:AMOL","SCTID:413441006"],"synonyms":[{"name":"AML M5","type":"exact"},{"name":"AML-M5","type":"related"},{"name":"acute monoblastic leukaemia","type":"related"},{"name":"acute monoblastic leukaemia and acute monocytic leukaemia","type":"exact"},{"name":"acute monoblastic leukemia","type":"related"},{"name":"acute monoblastic leukemia and acute monocytic leukemia","type":"exact"},{"name":"acute monoblastic/monocytic leukaemia","type":"related"},{"name":"acute monoblastic/monocytic leukemia","type":"related"},{"name":"acute monocytic leukaemia (FAB M5B)","type":"exact"},{"name":"acute monocytic leukaemia (FAB M5b)","type":"exact"},{"name":"acute monocytic leukaemia without mention of remission","type":"exact"},{"name":"acute monocytic leukemia","type":"exact"},{"name":"acute monocytic leukemia (FAB M5B)","type":"exact"},{"name":"acute monocytic leukemia (FAB M5b)","type":"exact"},{"name":"acute monocytic leukemia without mention of remission","type":"exact"},{"name":"acute monocytic leukemia, FAB M5","type":"exact"},{"name":"acute monocytic leukemia, morphology","type":"exact"},{"name":"acute monocytic leukemia, morphology (morphologic abnormality)","type":"exact"},{"name":"acute myeloblastic leukaemia type 5","type":"related"},{"name":"acute myeloblastic leukemia type 5","type":"related"},{"name":"leukemia, acute monocytic","type":"related"},{"name":"leukemia, monocytic, malignant","type":"exact"},{"name":"monocytic leukaemia","type":"broad"},{"name":"monocytic leukemia","type":"broad"},{"name":"monocytic leukemia, acute","type":"exact"}],"termid":"MONDO:0007896","xrefs":{"Monarch":{"xref_id":"0007896"}}}


id: PBO:0047901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(7)(q32.3)","termid":"PBO:0047901"}


id: PBO:0041480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 11 open reading frame 86","termid":"PBO:0041480"}


id: PBO:0048180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRB2 associated binding protein 1","termid":"PBO:0048180"}


id: PBO:0002459
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.4.2.17","termid":"PBO:0002459"}


id: SO:0000186
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A retrotransposon flanked by long terminal repeat sequences.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retrotransposon","termid":"SO:0000180"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LTR_retrotransposon","synonyms":[{"name":"LTR retrotransposon","type":"exact"},{"name":"long terminal repeat retrotransposon","type":"exact"}],"termid":"SO:0000186"}


id: PBO:0060692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A3","termid":"PBO:0060692"}


id: GO:0048941
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process aimed at the progression of a glial cell in the posterior lateral line nerve over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral line nerve glial cell development","termid":"GO:0048937"},{"relation_name":"part_of","term_name":"posterior lateral line nerve glial cell differentiation","termid":"GO:0048931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior lateral line nerve glial cell development","termid":"GO:0048941"}


id: MONDO:0017476
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"upper limb hypertrophy","secondary_identifiers":["icd11.foundation:663591902","MEDGEN:488921","UMLS:C0575518","GARD:21212","Orphanet:295049"],"termid":"MONDO:0017476","xrefs":{"Monarch":{"xref_id":"0017476"}}}


id: FYPO:0000377
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the frequency of occurrence of apoptosis is increased. Apoptosis is a form of cell death characterized by rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), plasma membrane blebbing and fragmentation of the cell into apoptotic bodies.","definition_xrefs":["GO:0006915","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"increased frequency of apoptosis","synonyms":[{"name":"apoptosis: increased","type":"related"},{"name":"increased apoptosis","type":"exact"},{"name":"increased apoptotic frequency","type":"exact"}],"termid":"FYPO:0000377"}


id: PBO:0072967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretoglobin family 1B member 2, pseudogene","termid":"PBO:0072967"}


id: SO:0001692
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A site where restriction enzymes can cleave that will produce an overhang or 'sticky end'.","direct_ancestors":[{"relation_name":"is_a","term_name":"restriction_enzyme_recognition_site","termid":"SO:0001687"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sticky_end_restriction_enzyme_cleavage_site","synonyms":[{"name":"sticky end restriction enzyme cleavage site","type":"related"}],"termid":"SO:0001692"}


id: PBO:0073879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 10 member 6","termid":"PBO:0073879"}


id: GO:0003024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events by which a decrease in diameter of an artery is detected and converted to a molecular signal.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"baroreceptor detection of arterial stretch","termid":"GO:0001981"},{"relation_name":"part_of","term_name":"baroreceptor response to decreased systemic arterial blood pressure","termid":"GO:0001982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"baroreceptor detection of decreased arterial stretch","termid":"GO:0003024"}


id: PBO:0054627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2032","termid":"PBO:0054627"}


id: PBO:0056802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major facilitator superfamily domain containing 1","termid":"PBO:0056802"}


id: MONDO:0035763
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"idiopathic non-lupus full-house nephropathy","secondary_identifiers":["UMLS:C5680132","GARD:22285","MEDGEN:1830099","Orphanet:567544"],"synonyms":[{"name":"Idiopathic non-lupus FHN","type":"exact"}],"termid":"MONDO:0035763","xrefs":{"Monarch":{"xref_id":"0035763"}}}


id: GO:0003006
data:
  {"annotated_genes":["SJAG_03536","SJAG_03997","SJAG_03915","SJAG_04615","SJAG_03746","SJAG_01076","SJAG_03057","SJAG_00769","SJAG_00399","SJAG_01769","SJAG_00293","SJAG_00320","SJAG_04238","SJAG_04470","SJAG_00073","SJAG_02241","SJAG_05153","SJAG_02718","SJAG_00247","SJAG_00405","SJAG_03221","SJAG_02736","SJAG_04080","SJAG_00757","SJAG_02460","SJAG_02712","SJAG_01531","SJAG_00826","SJAG_04140","SJAG_04853","SJAG_04922","SJAG_03013","SJAG_01419","SJAG_02724","SJAG_06638","SJAG_03557","SJAG_00974","SJAG_04010","SJAG_05309","SJAG_01483","SJAG_03097","SJAG_03006","SJAG_00486","SJAG_01068","SJAG_01677","SJAG_04868","SJAG_04901","SJAG_00971","SJAG_03250","SJAG_02401","SJAG_00993","SJAG_02320","SJAG_04859","SJAG_03483","SJAG_02556","SJAG_02319","SJAG_03587","SJAG_04275","SJAG_04184","SJAG_01321","SJAG_02828","SJAG_02226","SJAG_01495","SJAG_04781","SJAG_02248","SJAG_01113","SJAG_01465","SJAG_05239","SJAG_04271","SJAG_02529","SJAG_02169","SJAG_01410","SJAG_04483","SJAG_01662","SJAG_00663","SJAG_03090","SJAG_03688","SJAG_01017","SJAG_00114","SJAG_02079","SJAG_01601","SJAG_04236","SJAG_00821"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114569,106954,98750,102546,113365,98335],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030437"},{"annotations":[113170,95829],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0071998"},{"annotations":[96278],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034413"},{"annotations":[92061,90026,90515,93588],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0030476"},{"annotations":[74739],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034412"},{"annotations":[119644,105992,115941,119652,110915],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070591"},{"annotations":[74741,93315,106808],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0031321"},{"annotations":[107118,115789,93104,99367,100644,101724,120415,97189,99404,109222,103530,111963,120716,120899],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0032120"},{"annotations":[101653,115790,99368,104742,101654,94105,108667,105950,98684,109553],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031322"},{"annotations":[118710,118070,93051,100933,118398,89745,95201,120725],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0007535"},{"annotations":[112149,97994,120644,107901,100934,99235,90980,108467,110353,112672,91107,89746,116884,118663,102401],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007534"},{"annotations":[120974,120973,108885],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007531"},{"annotations":[98465,100872,94491],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007533"},{"annotations":[61316,110354,104779,95892],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071515"},{"annotations":[113053],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0075297"},{"annotations":[104110],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0075296"},{"annotations":[92540],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903024"},{"annotations":[94001],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0034307"},{"annotations":[118795],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903023"},{"annotations":[95166],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071171"},{"annotations":[107845,117832,101656,101941,96319,101655],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070583"}]},"cv_name":"biological_process","definition":"A developmental process in which a progressive change in the state of some part of an organism, germline or somatic, specifically contributes to its ability to form offspring.","definition_xrefs":["GOC:dph","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive process","termid":"GO:0022414"},{"relation_name":"is_a","term_name":"developmental 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process involved in reproduction","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"puberty","type":"narrow"},{"name":"reproductive developmental process","type":"related"}],"termid":"GO:0003006","terms_by_termid":{"GO:0007531":null,"GO:0007533":null,"GO:0007534":null,"GO:0007535":null,"GO:0030437":null,"GO:0030476":null,"GO:0031321":null,"GO:0031322":null,"GO:0032120":null,"GO:0034307":null,"GO:0034412":null,"GO:0034413":null,"GO:0070583":null,"GO:0070591":null,"GO:0071171":null,"GO:0071515":null,"GO:0071998":null,"GO:0075296":null,"GO:0075297":null,"GO:1903023":null,"GO:1903024":null}}


id: GO:0044335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes involved in neural crest cell differentiation.","definition_xrefs":["GOC:jl","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete canonical Wnt signaling pathway involved in neural crest cell differentiation (obsolete GO:0044335)","synonyms":[{"name":"canonical Wnt receptor signaling pathway involved in neural crest cell differentiation","type":"exact"},{"name":"canonical Wnt receptor signalling pathway involved in neural crest cell differentiation","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in neural crest cell differentiation","type":"exact"}],"termid":"GO:0044335"}


id: GO:0035356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of triglyceride within a cell.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular chemical homeostasis","termid":"GO:0055082"},{"relation_name":"is_a","term_name":"triglyceride homeostasis","termid":"GO:0070328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular triglyceride homeostasis","synonyms":[{"name":"cellular triglyceride homeostasis","type":"exact"}],"termid":"GO:0035356"}


id: PBO:0071982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 pseudogene 11","termid":"PBO:0071982"}


id: MONDO:0015266
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete brucellosis (obsolete MONDO:0015266)","termid":"MONDO:0015266","xrefs":{"Monarch":{"xref_id":"0015266"}}}


id: GO:0045156
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the directed movement of electrons within the cyclic electron transport pathway of photosynthesis.","definition_xrefs":["GOC:ai","ISBN:0716731363"],"gene_count":0,"genotype_count":0,"name":"obsolete electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity (obsolete GO:0045156)","synonyms":[{"name":"cytochrome","type":"related"},{"name":"cytochrome bc1 complex","type":"narrow"}],"termid":"GO:0045156"}


id: MONDO:0012194
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"intracranial berry aneurysm","termid":"MONDO:0016483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aneurysm, intracranial berry, 3","secondary_identifiers":["DOID:0080966","OMIM:609122","UMLS:C1836757","MEDGEN:332280","GARD:18322","MESH:C563792"],"synonyms":[{"name":"ANIB3","type":"exact"},{"name":"aneurysm, intracranial BERRY, 3","type":"related"}],"termid":"MONDO:0012194","xrefs":{"Monarch":{"xref_id":"0012194"}}}


id: MONDO:1012322
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"laryngeal paralysis, non-human animal","termid":"MONDO:1011928"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laryngeal paralysis, dog","secondary_identifiers":["OMIA:001206-9615"],"termid":"MONDO:1012322","xrefs":{"Monarch":{"xref_id":"1012322"}}}


id: GO:2000174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of pro-T cell differentiation.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell differentiation","termid":"GO:0045580"},{"relation_name":"is_a","term_name":"regulation of lymphoid progenitor cell differentiation","termid":"GO:1905456"},{"relation_name":"regulates","term_name":"pro-T cell differentiation","termid":"GO:0002572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of pro-T cell differentiation","synonyms":[{"name":"regulation of pro-T lymphocyte differentiation","type":"exact"}],"termid":"GO:2000174"}


id: PBO:0047737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FNDC1 intronic transcript 1","termid":"PBO:0047737"}


id: PBO:0057670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1261","termid":"PBO:0057670"}


id: MONDO:0042495
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A arteriosclerosis disorder that involves the retina.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arteriosclerosis disorder","termid":"MONDO:0002277"},{"relation_name":"is_a","term_name":"retinal vascular disorder","termid":"MONDO:0002311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"arteriosclerotic retinopathy","secondary_identifiers":["SCTID:95691008","MEDGEN:573178","ICD9:440.8","UMLS:C0339478"],"synonyms":[{"name":"arteriosclerosis disorder of retina","type":"exact"},{"name":"arteriosclerosis, retina","type":"related"},{"name":"arteriosclerotic retinopathy","type":"exact"},{"name":"retina arteriosclerosis disorder","type":"exact"},{"name":"retinal arteriosclerosis","type":"related"},{"name":"retinopathy, arteriosclerotic","type":"related"}],"termid":"MONDO:0042495","xrefs":{"Monarch":{"xref_id":"0042495"}}}


id: GO:0120106
data:
  {"annotated_genes":["SJAG_02266","SJAG_01665","SJAG_03145","SJAG_03703","SJAG_03088"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[102352,102517,106974,110900,119735],"is_not":false,"summary":null,"term":"GO:0120106"}]},"cv_name":"cellular_component","definition":"The region of the mitotic actomyosin ring containing actin filaments and cross linkers, myosin motors, and connections to the plasma membrane through the intermediate layer. It is further from the plasma membrane than the intermediate layer which it is adjacent to.","definition_xrefs":["GOC:krc","PMID:28914606","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"mitotic actomyosin contractile ring","termid":"GO:0110085"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01665":null,"SJAG_02266":null,"SJAG_03088":null,"SJAG_03145":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0070938"}],"interesting_parent_ids":["GO:0005938","GO:0005737","GO:0015629","GO:0070938","GO:0005575"],"is_obsolete":false,"name":"mitotic actomyosin contractile ring, distal actin filament layer","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"actomyosin contractile ring, distal actin filament layer","type":"exact"}],"termid":"GO:0120106","terms_by_termid":{"GO:0120106":null}}


id: PR:Q9P7V5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sec72 gene.","definition_xrefs":["UniProtKB:Q9P7V5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein sec72 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC30.01c","synonyms":[{"name":"Spom972h-sec72","type":"exact"}],"termid":"PR:Q9P7V5"}


id: GO:0044178
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding any of the compartments of the host cell Golgi apparatus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell membrane","termid":"GO:0033644"},{"relation_name":"part_of","term_name":"host cell endomembrane system","termid":"GO:0033645"},{"relation_name":"part_of","term_name":"host cell Golgi apparatus","termid":"GO:0044177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell Golgi membrane","synonyms":[{"name":"host Golgi membrane","type":"exact"}],"termid":"GO:0044178"}


id: GO:0033838
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + a flavonol 3-O-beta-D-glucoside = UDP + a flavonol 3-O-beta-D-glucosyl-(1->2)-beta-D-glucoside.","definition_xrefs":["EC:2.4.1.239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosyltransferase activity","termid":"GO:0046527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"flavonol-3-O-glucoside glucosyltransferase activity","secondary_identifiers":["RHEA:18893","MetaCyc:2.4.1.239-RXN"],"synonyms":[{"name":"UDP-glucose:flavonol-3-O-glucoside 2''-O-beta-D-glucosyltransferase activity","type":"related"}],"termid":"GO:0033838"}


id: PBO:0031708
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormally_arrested_mitotic_cell_cycle_progression","termid":"PBO:0031708"}


id: PATO:0000754
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000754 startle response (obsolete PATO:0000754)","termid":"PATO:0000754"}


id: PBO:0031663
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_protein_modification","termid":"PBO:0031663"}


id: MONDO:0017571
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Proteus-like syndrome describes patients who do not meet the diagnostic criteria for Proteus syndrome but who share a multitude of characteristic clinical features of the disease.","definition_xrefs":["Orphanet:2969"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder","termid":"MONDO:0002051"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"},{"relation_name":"is_a","term_name":"PTEN hamartoma tumor syndrome","termid":"MONDO:0017623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Proteus-like syndrome","secondary_identifiers":["GARD:12801","SCTID:716862002","MEDGEN:356222","NCIT:C179930","UMLS:C1866398"],"synonyms":[{"name":"Cohen-Hayden syndrome","type":"exact"},{"name":"Proteus like syndrome intellectual disability eye defect","type":"related"},{"name":"Proteus like syndrome mental retardation eye defect","type":"related"}],"termid":"MONDO:0017571","xrefs":{"Monarch":{"xref_id":"0017571"}}}


id: GO:0006002
data:
  {"annotated_genes":["SJAG_00605","SJAG_04728"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79583,80089],"is_not":false,"summary":null,"term":"GO:0006002"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving fructose 6-phosphate, also known as F6P. The D-enantiomer is an important intermediate in glycolysis, gluconeogenesis, and fructose metabolism.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00605":null,"SJAG_04728":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fructose 6-phosphate metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"fructose 6-phosphate metabolism","type":"exact"}],"termid":"GO:0006002","terms_by_termid":{"GO:0006002":null}}


id: MONDO:0100082
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Noonan syndrome with multiple lentigines in which the cause of the disease is a heterozygous mutation in the PTPN11 gene on chromosome 12q24.","definition_xrefs":["OMIM:151100","PMID:12058348"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Noonan syndrome with multiple lentigines","termid":"MONDO:0007893"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0000426"],"is_obsolete":false,"name":"LEOPARD syndrome 1","secondary_identifiers":["UMLS:C4551484","DOID:0080548","MEDGEN:1631694"],"synonyms":[{"name":"LEOPARD syndrome 1","type":"exact"},{"name":"LEOPARD syndrome type 1","type":"exact"},{"name":"LPRD1","type":"exact"},{"name":"lentiginosis, cardiomyopathic","type":"exact"},{"name":"multiple lentigines syndrome","type":"exact"}],"termid":"MONDO:0100082","xrefs":{"Monarch":{"xref_id":"0100082"}}}


id: PBO:0113073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved ubiquitin (Ub) chain assembly factor (E4); forms branched Ub chains on substrates destined for degradation, catalyzing K48-linked multi-monoubiquitination of K29-linked Ub chains assembled by Ub-ligase Ufd4p; involved in Ub-fusion degradation pathway, OLE membrane fluidity pathway, stress response survival, and ERAD pathway for misfolded proteins where it promotes ubiquitination and transfer of ERAD substrates to Rad23p; U-box family member; homologous to human Ufd2a, Ufd2b","termid":"PBO:0113073"}


id: GO:1901317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of flagellated sperm motility.","definition_xrefs":["GOC:cilia","GOC:krc","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cilium movement involved in cell motility","termid":"GO:0060295"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"flagellated sperm motility","termid":"GO:0030317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of flagellated sperm motility","synonyms":[{"name":"regulation of sperm motility","type":"broad"},{"name":"regulation of sperm movement","type":"broad"}],"termid":"GO:1901317"}


id: PATO:0000325
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000325 bright (obsolete PATO:0000325)","termid":"PATO:0000325"}


id: GO:0140054
data:
  {"annotated_genes":["SJAG_01205"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111166],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140172"},{"annotations":[111167],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140173"}]},"cv_name":"molecular_function","definition":"A histone reader that specifically binds either to an unmodified histone H2A or a form modified by a post-translational modification on a specific residue. The most common PTMs on histones are methylation, acetylation and phosphorylation.","definition_xrefs":["PMID:11498575","PMID:31082667","PMID:25688442","PMID:34726351"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone reader activity","termid":"GO:0140566"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01205":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0140566"}],"interesting_parent_ids":["GO:0060090","GO:0140566","GO:0030674","GO:0003674"],"is_obsolete":false,"name":"histone H2A reader activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"histone H2A reader","type":"exact"}],"termid":"GO:0140054","terms_by_termid":{"GO:0140172":null,"GO:0140173":null}}


id: MOD:00891
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to D-serine.","definition_xrefs":["PubMed:7973665","RESID:AA0195","PubMed:6893271","ChEBI:29998"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stereoisomerized residue","termid":"MOD:00664"},{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-serine","synonyms":[{"name":"(R)-2-amino-3-hydroxypropanoic acid","type":"exact"},{"name":"D-Ser","type":"exact"},{"name":"D-serine","type":"exact"}],"termid":"MOD:00891"}


id: SO:0001403
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A post translationally modified valine amino acid feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_amino_acid_feature","termid":"SO:0001385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_L_valine","secondary_identifiers":["MOD:00920"],"synonyms":[{"name":"ModVal","type":"exact"},{"name":"modified L valine","type":"exact"},{"name":"modified L-valine","type":"exact"}],"termid":"SO:0001403"}


id: MONDO:1011286
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Leber hereditary optic neuropathy that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Leber hereditary optic neuropathy, non-human animal","termid":"MONDO:1010358"},{"relation_name":"is_a","term_name":"dilated cardiomyopathy, cattle","termid":"MONDO:1010451"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Leber hereditary optic neuropathy, cattle","secondary_identifiers":["OMIA:002557-9913"],"termid":"MONDO:1011286","xrefs":{"Monarch":{"xref_id":"1011286"}}}


id: PBO:0116220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-oxoprolinase (ATP-hydrolyzing), Oxp2","termid":"PBO:0116220"}


id: GO:0048401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of intermediate mesoderm cell fate specification.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mesodermal cell fate specification","termid":"GO:0042662"},{"relation_name":"is_a","term_name":"regulation of intermediate mesodermal cell fate specification","termid":"GO:0048399"},{"relation_name":"negatively_regulates","term_name":"intermediate mesodermal cell fate specification","termid":"GO:0048398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of intermediate mesodermal cell fate specification","synonyms":[{"name":"down regulation of intermediate mesodermal cell fate specification","type":"exact"},{"name":"down-regulation of intermediate mesodermal cell fate specification","type":"exact"},{"name":"downregulation of intermediate mesodermal cell fate specification","type":"exact"},{"name":"inhibition of intermediate mesodermal cell fate specification","type":"narrow"}],"termid":"GO:0048401"}


id: PBO:0057000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 92b","termid":"PBO:0057000"}


id: PBO:0054075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1425","termid":"PBO:0054075"}


id: PBO:0062072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 3 pseudogene","termid":"PBO:0062072"}


id: MONDO:1040033
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital muscular dystrophy due to dystroglycanopathy characterized by a wide phenotypic spectrum which includes hypotonia and muscular weakness present at birth or early infancy, delayed or arrested motor development, and normal intellectual abilities with normal (or only mild abnormalities) neuroimaging studies. Feeding difficulties, joint and spinal deformities, and respiratory insufficiency may be associated. Decreased alpha-dystroglycan on immunohistochemical muscle staining and elevated serum creatine kinase are observed.","definition_xrefs":["Orphanet:370980"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital muscular dystrophy","termid":"MONDO:0019950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"congenital muscular dystrophy without intellectual disability","secondary_identifiers":["MEDGEN:1681503","UMLS:C5190847"],"synonyms":[{"name":"CMD without intellectual disability","type":"exact"},{"name":"CMD-no MR","type":"exact"},{"name":"congenital muscular dystrophy-dystroglycanopathy without intellectual disability","type":"exact"}],"termid":"MONDO:1040033","xrefs":{"Monarch":{"xref_id":"1040033"}}}


id: PBO:0063627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"profilin 1 pseudogene 3","termid":"PBO:0063627"}


id: GO:0048011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by neurotrophin binding to its receptor on the surface of a target cell where the receptor possesses tyrosine kinase activity, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:12065629","GOC:signaling","GOC:ceb","GOC:jc","Wikipedia:Trk_receptor","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor protein tyrosine kinase signaling pathway","termid":"GO:0007169"},{"relation_name":"is_a","term_name":"neurotrophin signaling pathway","termid":"GO:0038179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"neurotrophin TRK receptor signaling pathway","secondary_identifiers":["Reactome:R-HSA-193704","Reactome:R-HSA-166520","Reactome:R-HSA-167021","Reactome:R-HSA-187042"],"synonyms":[{"name":"TrkA signaling pathway","type":"narrow"},{"name":"TrkB signaling pathway","type":"narrow"},{"name":"TrkC signaling pathway","type":"narrow"},{"name":"tropomyosin-receptor-kinase signaling","type":"exact"}],"termid":"GO:0048011"}


id: GO:0036356
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,3-diphosphoglycerate (DPG) + ATP = cyclic 2,3-diphosphoglycerate (cDPG) + ADP + phosphate.","definition_xrefs":["GOC:crds","PMID:8320225","PMID:9811660","PMID:2226838"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0009975"}],"interesting_parent_ids":["GO:0009975","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"cyclic 2,3-diphosphoglycerate synthetase activity","synonyms":[{"name":"CPGS activity","type":"exact"},{"name":"cDPGS activity","type":"exact"}],"termid":"GO:0036356"}


id: GO:0004650
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the random hydrolysis of (1->4)-alpha-D-galactosiduronic linkages in pectate and other galacturonans.","definition_xrefs":["EC:3.2.1.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016798","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"polygalacturonase activity","secondary_identifiers":["MetaCyc:RXN-2103"],"synonyms":[{"name":"endo-D-galacturonase activity","type":"exact"},{"name":"endo-polygalacturonase activity","type":"exact"},{"name":"endogalacturonase activity","type":"exact"},{"name":"endopolygalacturonase activity","type":"exact"},{"name":"pectin depolymerase activity","type":"narrow"},{"name":"pectin hydrolase activity","type":"related"},{"name":"pectin polygalacturonase activity","type":"related"},{"name":"pectinase activity","type":"narrow"},{"name":"pectolase activity","type":"related"},{"name":"poly(1,4-alpha-D-galacturonide) glycanohydrolase activity","type":"exact"},{"name":"poly-alpha-1,4-galacturonide glycanohydrolase activity","type":"exact"}],"termid":"GO:0004650"}


id: PBO:0029572
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_vegetative_cell_population_(obsolete_FYPO:0002149)","termid":"PBO:0029572"}


id: FYPO:0005824
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the permeability of the plasma membrane to one or more substances is greater than normal.","definition_xrefs":["PomBase:mah","PMID:27886462"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal plasma membrane morphology during vegetative growth","termid":"FYPO:0000364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased plasma membrane permeability","synonyms":[{"name":"increased plasma membrane permeability during mitotic cell cycle","type":"related"},{"name":"increased plasma membrane permeability during vegetative growth","type":"exact"}],"termid":"FYPO:0005824"}


id: PBO:0027491
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_oxidation_in_stationary_phase","termid":"PBO:0027491"}


id: MONDO:0006938
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the renal pelvis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephritis","termid":"MONDO:0001166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"pyelitis","secondary_identifiers":["SCTID:27174002","DOID:2744","MEDGEN:48268","MESH:D011702","NCIT:C34964","UMLS:C0034183","MedDRA:10037584"],"synonyms":[{"name":"inflammation of renal pelvis","type":"exact"},{"name":"renal pelvis inflammation","type":"exact"}],"termid":"MONDO:0006938","xrefs":{"Monarch":{"xref_id":"0006938"}}}


id: PBO:0090846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-N ortholog Mis15","termid":"PBO:0090846"}


id: PBO:0003976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol metabolism protein Opi10 (predicted)","termid":"PBO:0003976"}


id: GO:0140838
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: RNA polymerase II large subunit CTD heptapeptide repeat (consensus YSPTSPS) cis-proline (omega=180) = RNA polymerase II large subunit trans-proline (omega=0).","definition_xrefs":["PMID:28248323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-prolyl cis-trans isomerase activity","termid":"GO:0003755"},{"relation_name":"is_a","term_name":"RNA polymerase II CTD heptapeptide repeat modifying activity","termid":"GO:0140994"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"RNA polymerase II CTD heptapeptide repeat peptidyl-prolyl isomerase activity","termid":"GO:0140838"}


id: PBO:0004708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pet117 cytochrome c oxidase assemby protein (predicted)","termid":"PBO:0004708"}


id: PBO:0066468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication factor C subunit 5","termid":"PBO:0066468"}


id: MONDO:0012500
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any chilblain lupus in which the cause of the disease is a mutation in the TREX1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial chilblain lupus","termid":"MONDO:0018827"},{"relation_name":"is_a","term_name":"TREX1-related type 1 interferonopathy","termid":"MONDO:0700256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"chilblain lupus 1","secondary_identifiers":["GARD:18493","UMLS:C0024145","OMIM:610448","MEDGEN:9822"],"synonyms":[{"name":"CHBL1","type":"related"},{"name":"TREX1 chilblain lupus","type":"exact"},{"name":"chilblain lupus","type":"broad"},{"name":"chilblain lupus 1","type":"exact"},{"name":"chilblain lupus caused by mutation in TREX1","type":"exact"},{"name":"chilblain lupus type 1","type":"exact"}],"termid":"MONDO:0012500","xrefs":{"Monarch":{"xref_id":"0012500"}}}


id: MONDO:0014426
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any nanophthalmia in which the cause of the disease is a mutation in the TMEM98 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nanophthalmia","termid":"MONDO:0005514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"nanophthalmos 4","secondary_identifiers":["MEDGEN:863285","GARD:18629","OMIM:615972","UMLS:C4014848"],"synonyms":[{"name":"NNO4","type":"related"},{"name":"Nanophthalmia 4","type":"related"},{"name":"TMEM98 nanophthalmia","type":"exact"},{"name":"nanophthalmia caused by mutation in TMEM98","type":"exact"},{"name":"nanophthalmos 4","type":"exact"},{"name":"nanophthalmos type 4","type":"exact"}],"termid":"MONDO:0014426","xrefs":{"Monarch":{"xref_id":"0014426"}}}


id: PBO:0048632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gap junction protein alpha 1","termid":"PBO:0048632"}


id: GO:0019070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The processes involved in creating a mature, stable viral genome. Begins after genome replication with a newly synthesized nucleic acid and ends when the genome is ready to be packaged. Includes the addition of proteins to the newly synthesized genome, and DNA repair processes.","definition_xrefs":["PMID:21490093","GOC:pk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"virion assembly","termid":"GO:0019068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral genome maturation","secondary_identifiers":["Reactome:R-HSA-168330"],"termid":"GO:0019070"}


id: GO:0010518
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of phospholipase activity, the hydrolysis of a phospholipid.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phospholipase activity","termid":"GO:0010517"},{"relation_name":"is_a","term_name":"positive regulation of lipase activity","termid":"GO:0060193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of phospholipase activity","termid":"GO:0010518"}


id: SO:0002150
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A uORF beginning with the canonical start codon AUG.","definition_xrefs":["PMID:26684391","PMID:27313038"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uORF","termid":"SO:0002027"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AUG_initiated_uORF","synonyms":[{"name":"AUG initiated uORF","type":"exact"}],"termid":"SO:0002150"}


id: PBO:0085291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phenylacrylic acid decarboxylase; decarboxylates aromatic carboxylic acids to the corresponding vinyl derivatives; confers resistance to cinnamic acid; overexpression of both Pad1p and Fdc1p increases cinnamic acid decarboxylase activity due to the Pad1p-catalyzed formation of a diffusible cofactor required for Fdc1p activity; contains mRNA binding activity; homolog of E. coli UbiX","termid":"PBO:0085291"}


id: PBO:0074411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 13","termid":"PBO:0074411"}


id: PR:Q9UT68
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC4F11.03c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UT68"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C4F11.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4F11.03c","synonyms":[{"name":"Spom972h-SPCC4F11.03c","type":"exact"}],"termid":"PR:Q9UT68"}


id: GO:1990206
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: jasmonyl-Ile + H2O = jasmonic acid + L-isoleucine.","definition_xrefs":["PMID:23943861"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds","termid":"GO:0016810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016810","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"jasmonyl-Ile conjugate hydrolase activity","synonyms":[{"name":"JA-Ile hydrolase","type":"related"}],"termid":"GO:1990206"}


id: PBO:0076379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TGF-beta activated kinase 1/MAP3K7 binding protein 3 pseudogene 1","termid":"PBO:0076379"}


id: PBO:0083988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glutaredoxin that employs a dithiol mechanism of catalysis; monomeric; activity is low and null mutation does not affect sensitivity to oxidative stress; GFP-fusion protein localizes to the cytoplasm; expression strongly induced by arsenic","termid":"PBO:0083988"}


id: GO:0039632
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O = ADP + phosphate, to drive movement along a single- or double-stranded RNA molecule, which contributes to the packaging of viral RNA into a nucleocapsid.","definition_xrefs":["PMID:22297533","GOC:bm"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA translocase activity involved in viral RNA genome packaging (obsolete GO:0039632)","synonyms":[{"name":"RNA packaging ATPase activity","type":"exact"},{"name":"viral RNA packaging activity","type":"related"}],"termid":"GO:0039632"}


id: MONDO:0011691
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial amyotrophic lateral sclerosis","termid":"MONDO:0005144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"amyotrophic lateral sclerosis type 3","secondary_identifiers":["MEDGEN:339829","MESH:C564688","OMIM:606640","UMLS:C1847735","DOID:0060195","GARD:10501"],"synonyms":[{"name":"ALS3","type":"related"},{"name":"amyotrophic lateral sclerosis 3","type":"exact"}],"termid":"MONDO:0011691","xrefs":{"Monarch":{"xref_id":"0011691"}}}


id: PBO:0055216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2642","termid":"PBO:0055216"}


id: FYPO:0001131
data:
  {"alleles_by_uniquename":{"SJAG_01050:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01050","name":"nur1delta","uniquename":"SJAG_01050:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[121312],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001132"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to heterochromatin is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin during vegetative growth","termid":"FYPO:0000452"},{"relation_name":"is_a","term_name":"abnormal protein localization to heterochromatin","termid":"FYPO:0004718"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01050":null,"SJAG_01745":null,"SJAG_03892":null},"genotype_count":1,"genotypes_by_uniquename":{"nur1delta__vps4delta":{"display_name":"nur1delta vps4delta","display_uniquename":"nur1delta__vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01050:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03892","SJAG_01050"],"name":"abnormal protein localization to heterochromatin during vegetative growth","references_by_uniquename":{"PMID:32109380":null},"synonyms":[{"name":"abnormal protein localisation to heterochromatin during vegetative growth","type":"exact"},{"name":"abnormal protein localization to heterochromatin during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001131","terms_by_termid":{"FYPO:0001132":null,"FYPO_EXT:0000001":null}}


id: MONDO:0004607
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cancer involving a epiglottic vallecula.","definition_xrefs":["MONDO:patterns/cancer"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oropharynx cancer","termid":"MONDO:0004608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"vallecula cancer","secondary_identifiers":["MEDGEN:509271","ICD9:146.3","SCTID:363395000","ICD10CM:C10.0","DOID:8556","UMLS:C0153386"],"synonyms":[{"name":"cancer of epiglottic vallecula","type":"exact"},{"name":"epiglottic vallecula cancer","type":"exact"},{"name":"malignant epiglottic vallecula neoplasm","type":"exact"},{"name":"malignant neoplasm of epiglottic vallecula","type":"exact"},{"name":"malignant tumor of vallecula","type":"exact"},{"name":"malignant tumour of vallecula","type":"exact"}],"termid":"MONDO:0004607","xrefs":{"Monarch":{"xref_id":"0004607"}}}


id: GO:0071929
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of an acetyl group to the lysine 40 residue of alpha-tubulin.","definition_xrefs":["PMID:17786050","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"internal peptidyl-lysine acetylation","termid":"GO:0018393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alpha-tubulin acetylation","termid":"GO:0071929"}


id: PBO:0028600
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_transcription_initiation_from_RNA_polymerase_III_promoter","termid":"PBO:0028600"}


id: PBO:0050104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 14","termid":"PBO:0050104"}


id: MONDO:0018076
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic, recurrent infection caused by the bacterium Mycobacterium tuberculosis. Tuberculosis (TB) may affect almost any tissue or organ of the body with the lungs being the most common site of infection. The clinical stages of TB are primary or initial infection, latent or dormant infection, and recrudescent or adult-type TB. Ninety to 95% of primary TB infections may go unrecognized. Histopathologically, tissue lesions consist of granulomas which usually undergo central caseation necrosis. Local symptoms of TB vary according to the part affected; acute symptoms include hectic fever, sweats, and emaciation; serious complications include granulomatous erosion of pulmonary bronchi associated with hemoptysis. If untreated, progressive TB may be associated with a high degree of mortality. This infection is frequently observed in immunocompromised individuals with AIDS or a history of illicit IV drug use.","definition_xrefs":["NCIT:C3423"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary bacterial infectious disease","termid":"MONDO:0000314"},{"relation_name":"is_a","term_name":"mycobacterial infectious disease","termid":"MONDO:0020590"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tuberculosis","secondary_identifiers":["icd11.foundation:2072728114","MEDGEN:22513","SCTID:56717001","DOID:399","MedDRA:10044755","GARD:7827","ICD9:017.94","Orphanet:3389","ICD9:017.96","ICD10CM:A15-A19","ICD9:017.92","UMLS:C0041296","MESH:D014376","ICD9:017.90","NORD:1801"],"synonyms":[{"name":"Kochs disease","type":"related"},{"name":"TB","type":"related"},{"name":"active tuberculosis","type":"narrow"},{"name":"tuberculosis disease","type":"exact"}],"termid":"MONDO:0018076","xrefs":{"Monarch":{"xref_id":"0018076"}}}


id: FYPO:0003943
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of thioredoxin peroxidase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"},{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000661","FYPO:0005447","FYPO:0000707","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"abnormal thioredoxin peroxidase activity","termid":"FYPO:0003943"}


id: GO:0001101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus by the chemical structure of the anion portion of a dissociated acid (rather than the acid acting as a proton donor). The acid chemical may be in gaseous, liquid or solid form.","definition_xrefs":["GOC:rn","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to acid chemical","synonyms":[{"name":"response to acid","type":"broad"},{"name":"response to acid anion","type":"related"},{"name":"response to oxoanion","type":"related"}],"termid":"GO:0001101"}


id: MONDO:0010474
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any microphthalmia with linear skin defects syndrome in which the cause of the disease is a mutation in the COX7B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"linear skin defects with multiple congenital anomalies","termid":"MONDO:0010672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005093"],"is_obsolete":false,"name":"linear skin defects with multiple congenital anomalies 2","secondary_identifiers":["UMLS:C3550921","GARD:15272","OMIM:300887","MEDGEN:763835","DOID:0111877"],"synonyms":[{"name":"COX7B microphthalmia with linear skin defects syndrome","type":"exact"},{"name":"LSDMCA2","type":"related"},{"name":"aplasia cutis congenita, Reticulolinear, with microcephaly, Facial Dysmorphism, and Other congenital anomalies","type":"related"},{"name":"linear skin defects with multiple congenital anomalies 2","type":"exact"},{"name":"linear skin defects with multiple congenital anomalies 2, X-linked dominant","type":"exact"},{"name":"linear skin defects with multiple congenital anomalies type 2","type":"exact"},{"name":"microphthalmia with linear skin defects syndrome caused by mutation in COX7B","type":"exact"}],"termid":"MONDO:0010474","xrefs":{"Monarch":{"xref_id":"0010474"}}}


id: PBO:0004666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sds3-like family protein Dep1","termid":"PBO:0004666"}


id: GO:0102827
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: raffinose + D-galactosylononitol = stachyose + 1D-4-O-methyl-myo-inositol.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete galactosylononitol-raffinose galactosyltransferase activity (obsolete GO:0102827)","termid":"GO:0102827"}


id: PBO:0111339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophismin-like histone chaperone/CENP-A amino terminus domain (NTD) isomerase Ani2/Fkbp40","termid":"PBO:0111339"}


id: PBO:0070780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 10","termid":"PBO:0070780"}


id: GO:1902186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of viral release from host cell.","definition_xrefs":["GOC:TermGenie","PMID:18305167"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of viral release from host cell (obsolete GO:1902186)","synonyms":[{"name":"regulation of release of virus from host","type":"exact"},{"name":"regulation of viral exit","type":"exact"},{"name":"regulation of viral release","type":"exact"},{"name":"regulation of viral shedding","type":"exact"}],"termid":"GO:1902186"}


id: PBO:0085442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Polyphosphatidylinositol phosphatase; dephosphorylates a number of phosphatidylinositol phosphates (PtdInsPs, PIPs) to PI; involved in endocytosis; hyperosmotic stress causes translocation to actin patches; synaptojanin-like protein with a Sac1 domain; INP52 has a paralog, INP53, that arose from the whole genome duplication","termid":"PBO:0085442"}


id: SO:0000668
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A match against an EST sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"expressed_sequence_match","termid":"SO:0000102"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EST_match","synonyms":[{"name":"EST match","type":"exact"}],"termid":"SO:0000668"}


id: GO:0061990
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: octanoyl-CoA + H+ + malonyl-[ACP] = 3-oxodecanoyl-[ACP] + CO2 + CoA.","definition_xrefs":["PMID:22753057","RHEA:42264"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"beta-ketodecanoyl-[acyl-carrier-protein] synthase activity","secondary_identifiers":["MetaCyc:RXN-13613","EC:2.3.1.207"],"termid":"GO:0061990"}


id: MONDO:0004860
data:
  {"annotated_genes":["SJAG_00845","SJAG_02878","SJAG_02286"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87604],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013644"},{"annotations":[88240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013805"},{"annotations":[88962,88961],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100119"}]},"cv_name":"mondo","definition":"A disease involving the vitreous humor.","direct_ancestors":[{"relation_name":"is_a","term_name":"vitreous body disorder","termid":"MONDO:0044137"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00845":null,"SJAG_02286":null,"SJAG_02878":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"vitreous disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:9720","UMLS:C0700141","MEDGEN:1843447","ICD9:379.24"],"synonyms":[{"name":"disease of vitreous humor","type":"exact"},{"name":"disease of vitreous humour","type":"exact"},{"name":"disease or disorder of vitreous humor","type":"exact"},{"name":"disease or disorder of vitreous humour","type":"exact"},{"name":"disorder of vitreous humor","type":"exact"},{"name":"disorder of vitreous humour","type":"exact"},{"name":"vitreous humor disease","type":"exact"},{"name":"vitreous humor disease or disorder","type":"exact"},{"name":"vitreous humour disease","type":"exact"},{"name":"vitreous humour disease or disorder","type":"exact"}],"termid":"MONDO:0004860","terms_by_termid":{"MONDO:0013644":null,"MONDO:0013805":null,"MONDO:0100119":null},"xrefs":{"Monarch":{"xref_id":"0004860"}}}


id: PBO:0041588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonic anhydrase 3","termid":"PBO:0041588"}


id: SO:0000451
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes a polyadenylated mRNA.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein_coding_gene","termid":"SO:0001217"},{"relation_name":"transcribed_to","term_name":"polyadenylated_mRNA","termid":"SO:0000871"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_with_polyadenylated_mRNA","synonyms":[{"name":"gene with polyadenylated mRNA","type":"exact"}],"termid":"SO:0000451"}


id: FYPO:0001619
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-lysine measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular amino acid level","termid":"FYPO:0003985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular lysine level","synonyms":[{"name":"decreased cellular L-lysine level","type":"exact"},{"name":"decreased cellular lysine level during mitotic cell cycle","type":"related"},{"name":"decreased cellular lysine level during vegetative growth","type":"exact"},{"name":"decreased level of lysine in cell","type":"exact"},{"name":"reduced cellular lysine level","type":"exact"},{"name":"reduced level of lysine in cell","type":"exact"}],"termid":"FYPO:0001619"}


id: GO:0005936
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The characteristic projection formed in response to mating pheromone by cells of Saccharomyces and other fungi with similar life cycles. Named after the Al Capp cartoon character, whose shape it resembles.","definition_xrefs":["GOC:mah","GOC:mcc"],"gene_count":0,"genotype_count":0,"name":"obsolete shmoo (obsolete GO:0005936)","synonyms":[{"name":"shmoo","type":"exact"}],"termid":"GO:0005936"}


id: RO:0002434
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship that holds between two entities in which the processes executed by the two entities are causally connected.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interacts_with","synonyms":[{"name":"in pairwise interaction with","type":"exact"}],"termid":"RO:0002434"}


id: PBO:0082501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of DNA polymerase delta; responsible for most of lagging strand DNA synthesis; required for chromosomal DNA replication during mitosis and meiosis, intragenic recombination, repair of double strand DNA breaks, and DNA replication during nucleotide excision repair (NER)","termid":"PBO:0082501"}


id: PBO:0048491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GCSH pseudogene 3","termid":"PBO:0048491"}


id: GO:0048100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of the anterior/posterior axis of the wing disc, a precursor to the wing.","definition_xrefs":["PMID:10625531","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior/posterior pattern specification, imaginal disc","termid":"GO:0007448"},{"relation_name":"is_a","term_name":"wing disc pattern formation","termid":"GO:0035222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"wing disc anterior/posterior pattern formation","termid":"GO:0048100"}


id: PR:Q9Y7P2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1450.15 gene.","definition_xrefs":["UniProtKB:Q9Y7P2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1450.15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1450.15","synonyms":[{"name":"Spom972h-SPCC1450.15","type":"exact"}],"termid":"PR:Q9Y7P2"}


id: PBO:0004722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBF/Mak21 family (predicted)","termid":"PBO:0004722"}


id: GO:0003320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The inward folding of myocardial tissue derived from the right half of the heart rudiment that will form the future ventral part of the heart tube.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelial fold involved in embryonic heart tube formation","termid":"GO:0003152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heart rudiment involution","termid":"GO:0003320"}


id: GO:0005817
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:clt"],"gene_count":0,"genotype_count":0,"name":"obsolete centrosomal mitotic factor (obsolete GO:0005817)","synonyms":[{"name":"centrosomal mitotic factor","type":"exact"}],"termid":"GO:0005817"}


id: PBO:0004260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein Pof10","termid":"PBO:0004260"}


id: PBO:0113577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RQT complex subunit ubiquitin-protein ligase E3 subunit Rqt1","termid":"PBO:0113577"}


id: MONDO:0022464
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete anophthalmia microcephaly hypogonadism (obsolete MONDO:0022464)","termid":"MONDO:0022464","xrefs":{"Monarch":{"xref_id":"0022464"}}}


id: MONDO:0017734
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sialidosis is a lysosomal storage disease, belonging to the group of oligosaccharidoses or glycoproteinoses, with a wide clinical spectrum that is divided into two main clinical subtypes: sialidosis type I, the milder, non dysmorphic form of the disease characterized by gait abnormalities, progressive visual loss, bilateral macular cherry red spots and myoclonus, that presents in adolescence or adulthood (second or third decade of life); and sialidosis type II the more severe, early onset form, characterized by a progressive and severe mucopolysaccharidosis-like phenotype with coarse facies, visceromegaly, dysostosis multiplex, and developmental delay. Bilateral macular cherry red spots are also present. Sialidosis type II has been further divided into congenital (with hydrops fetalis), infantile and juvenile presentations.","definition_xrefs":["Orphanet:309294"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharidosis","termid":"MONDO:0019251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0002561","MONDO:0005066"],"is_obsolete":false,"name":"sialidosis","secondary_identifiers":["UMLS:C0268226","SCTID:38795005","MedDRA:10058800","MEDGEN:120621","NANDO:1200116","NORD:1713","icd11.foundation:1180347697","NANDO:2200556","GARD:21331"],"termid":"MONDO:0017734","xrefs":{"Monarch":{"xref_id":"0017734"}}}


id: PBO:0080281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 44 pseudogene","termid":"PBO:0080281"}


id: GO:0010695
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the process involving the release of duplicated mitotic spindle pole bodies (SPBs) and their migration away from each other within the nuclear membrane.","definition_xrefs":["GOC:dph","PMID:16792804","GOC:tb","PMID:18500339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"regulates","term_name":"initial mitotic spindle pole body separation","termid":"GO:0000073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of mitotic spindle pole body separation","synonyms":[{"name":"regulation of SPB separation","type":"exact"}],"termid":"GO:0010695"}


id: GO:0016094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of polyprenols, prenols with more than 4 isoprenoid residues, which may be all-trans, or a mixture of cis and trans.","definition_xrefs":["GOC:go_curators","PMID:11108713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoprenoid biosynthetic process","termid":"GO:0008299"},{"relation_name":"is_a","term_name":"polyprenol metabolic process","termid":"GO:0016093"},{"relation_name":"is_a","term_name":"alcohol biosynthetic process","termid":"GO:0046165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"polyprenol biosynthetic process","synonyms":[{"name":"polyprenol anabolism","type":"exact"},{"name":"polyprenol biosynthesis","type":"exact"},{"name":"polyprenol formation","type":"exact"},{"name":"polyprenol synthesis","type":"exact"}],"termid":"GO:0016094"}


id: GO:0047953
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycerol + NADP+ = dihydroxyacetone + NADPH + H+.","definition_xrefs":["RHEA:12753"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"glycerol 2-dehydrogenase (NADP+) activity","secondary_identifiers":["EC:1.1.1.156","KEGG_REACTION:R01039","MetaCyc:GLYCEROL-2-DEHYDROGENASE-NADP+-RXN"],"synonyms":[{"name":"DHA oxidoreductase activity","type":"related"},{"name":"dihydroxyacetone (reduced nicotinamide adenine dinucleotide phosphate) reductase activity","type":"related"},{"name":"dihydroxyacetone reductase (NADPH)","type":"related"},{"name":"dihydroxyacetone reductase activity","type":"related"},{"name":"glycerol:NADP+ 2-oxidoreductase (glycerone-forming)","type":"related"}],"termid":"GO:0047953"}


id: MONDO:0014772
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cleft lip/palate in which the cause of the disease is a mutation in the DLX4 gene.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleft lip/palate","termid":"MONDO:0016044"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orofacial cleft 15","secondary_identifiers":["OMIM:616788","UMLS:C4225209","GARD:18307","MEDGEN:909661","DOID:0080408"],"synonyms":[{"name":"DLX4 cleft lip/palate","type":"exact"},{"name":"OFC15","type":"exact"},{"name":"cleft lip/palate caused by mutation in DLX4","type":"exact"},{"name":"orofacial cleft 15","type":"exact"},{"name":"orofacial cleft type 15","type":"exact"}],"termid":"MONDO:0014772","xrefs":{"Monarch":{"xref_id":"0014772"}}}


id: PBO:0017723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chorismate mutase Aro7 (predicted)","termid":"PBO:0017723"}


id: FYPO:0001714
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of malate into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal malate import","termid":"FYPO:0001713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased malate import","synonyms":[{"name":"decreased malate import across plasma membrane","type":"exact"},{"name":"decreased malate import during mitotic cell cycle","type":"related"},{"name":"decreased malate import during vegetative growth","type":"exact"},{"name":"decreased malate import into cell","type":"exact"},{"name":"decreased malate uptake","type":"exact"},{"name":"decreased malic acid import","type":"related"},{"name":"reduced malate import","type":"exact"}],"termid":"FYPO:0001714"}


id: GO:0150054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of postsynaptic neurotransmitter receptor diffusion trapping.","definition_xrefs":["PMID:20935643","GOC:bc","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular localization","termid":"GO:0060341"},{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"},{"relation_name":"is_a","term_name":"regulation of receptor localization to synapse","termid":"GO:1902683"},{"relation_name":"regulates","term_name":"postsynaptic neurotransmitter receptor diffusion trapping","termid":"GO:0098970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of postsynaptic neurotransmitter receptor diffusion trapping","termid":"GO:0150054"}


id: PR:O42700
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transaldolase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04445","PANTHER:PTHR10683:SF1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transaldolase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1020.06c","secondary_identifiers":["UniProtKB:O42700"],"synonyms":[{"name":"Spom972h-TALDO1","type":"exact"}],"termid":"PR:O42700"}


id: PBO:0047944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, folic acid type, rare, fra(16)(p13.11)","termid":"PBO:0047944"}


id: GO:0030032
data:
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id: GO:0035828
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id: PBO:0111331
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id: GO:0034494
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the microneme membrane.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular organelle lumen","termid":"GO:0070013"},{"relation_name":"part_of","term_name":"microneme","termid":"GO:0020009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"microneme lumen","termid":"GO:0034494"}


id: GO:1902432
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a division septum.","definition_xrefs":["GOC:TermGenie","PMID:9367977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell division site","termid":"GO:0072741"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to division septum","synonyms":[{"name":"protein localisation in division septum","type":"exact"},{"name":"protein localisation to division septum","type":"exact"},{"name":"protein localization in division septum","type":"exact"}],"termid":"GO:1902432"}


id: MONDO:0007276
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cat eye syndrome (CES) is a rare chromosomal disorder with a highly variable clinical presentation. Most patients have multiple malformations affecting the eyes (iris coloboma), ears (preauricular pits and/or tags), anal region (anal atresia), heart and kidneys. Intellectual disability is usually mild or borderline normal.","definition_xrefs":["Orphanet:195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cat-eye syndrome","secondary_identifiers":["DECIPHER:42","MEDGEN:120543","NORD:899","GARD:26","NCIT:C75477","UMLS:C0265493","icd11.foundation:1813923633","MESH:C535918","SCTID:26445008","OMIM:115470"],"synonyms":[{"name":"CAT eye syndrome","type":"exact"},{"name":"CES","type":"exact"},{"name":"Cat Eye Syndrome","type":"exact"},{"name":"Inv dup(22)(q11)","type":"related"},{"name":"Schmid-Fraccaro syndrome","type":"related"},{"name":"cat-eye syndrome (Type I)","type":"exact"},{"name":"chromosome 22 partial tetrasomy","type":"related"}],"termid":"MONDO:0007276","xrefs":{"Monarch":{"xref_id":"0007276"}}}


id: PBO:0108932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase 23, arginine","termid":"PBO:0108932"}


id: PR:O94238
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 60S ribosomal protein L14 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11127:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1805.13","secondary_identifiers":["UniProtKB:O94238"],"synonyms":[{"name":"SPAC1805.13","type":"related"},{"name":"Spom972h-RPL14","type":"exact"}],"termid":"PR:O94238"}


id: GO:0070425
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of a nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway (NLR) pathway.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039532"},{"relation_name":"is_a","term_name":"regulation of nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway","termid":"GO:0070424"},{"relation_name":"negatively_regulates","term_name":"nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway","termid":"GO:0035872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway","synonyms":[{"name":"negative regulation of NOD signaling pathway","type":"narrow"},{"name":"negative regulation of nucleotide-binding oligomerization domain containing signaling pathway","type":"narrow"},{"name":"negative regulation of nucleotide-binding oligomerization domain containing signalling pathway","type":"narrow"}],"termid":"GO:0070425"}


id: MONDO:1011764
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ichthyosis, non-human animal","termid":"MONDO:1011427"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ichthyosis fetalis, non-human animal","secondary_identifiers":["OMIA:002193"],"termid":"MONDO:1011764","xrefs":{"Monarch":{"xref_id":"1011764"}}}


id: FYPO:0007665
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell is viable, and contains one nucleus and one septum. The septum divides the cell into two compartments, one of which contains the nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable vegetative cell","termid":"FYPO:0001491"},{"relation_name":"is_a","term_name":"mononucleate monoseptate vegetative cell with anucleate compartment","termid":"FYPO:0007664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"viable mononucleate monoseptate vegetative cell with anucleate compartment","synonyms":[{"name":"displaced nucleus with septum","type":"related"},{"name":"viable mononucleate monoseptate cell during vegetative growth","type":"exact"},{"name":"viable mononucleate monoseptate vegetative cell","type":"exact"},{"name":"viable mononucleate monoseptate vegetative cell during mitotic cell cycle","type":"related"},{"name":"viable with septation in the absence of nuclear division","type":"related"},{"name":"viable with septation independent of mitosis","type":"related"},{"name":"viable with septation without nuclear division","type":"related"}],"termid":"FYPO:0007665"}


id: GO:0007350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The hierarchical steps resulting in the progressive subdivision of the anterior/posterior axis of the embryo.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic pattern specification","termid":"GO:0009880"},{"relation_name":"is_a","term_name":"segmentation","termid":"GO:0035282"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"blastoderm segmentation","termid":"GO:0007350"}


id: MONDO:0019800
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Chronic hepatic porphyrias represent a sub-group of porphyrias. They are characterized by bullous photodermatitis caused by a deficiency of uroporphyrinogen decarboxylase (URO-D; the fifth enzyme in the heme biosynthesis pathway). Chronic hepatic porphyria encompasses two diseases: porphyria cutanea tarda and hepatoerythropoietic porphyria (extremely rare).","definition_xrefs":["Orphanet:95161"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"inherited porphyria","termid":"MONDO:0019142"}],"gene_count":0,"genotype_count":0,"name":"obsolete chronic hepatic porphyria (obsolete MONDO:0019800)","synonyms":[{"name":"acute hepatic porphyria, chronic","type":"exact"},{"name":"chronic acute hepatic porphyria","type":"exact"}],"termid":"MONDO:0019800","xrefs":{"Monarch":{"xref_id":"0019800"}}}


id: GO:0019796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of any amino acid not found, or rarely found, in peptide linkage in proteins.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete nonprotein amino acid catabolic process (obsolete GO:0019796)","synonyms":[{"name":"nonprotein amino acid breakdown","type":"exact"},{"name":"nonprotein amino acid catabolic process","type":"exact"},{"name":"nonprotein amino acid catabolism","type":"exact"},{"name":"nonprotein amino acid degradation","type":"exact"}],"termid":"GO:0019796"}


id: PBO:0051258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (III)-44 (pseudogene)","termid":"PBO:0051258"}


id: FYPO:0008324
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular phenotype observed in the vegetative growth phase of the life cycle in which the total cytosolic ribosome content (monosomes + polysomes) in a cell is lower than normal.","definition_xrefs":["PMID:39358553","PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of macromolecular complex during vegetative growth","termid":"FYPO:0003684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cytosolic ribosome content","termid":"FYPO:0008324"}


id: PBO:0031838
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mating_projection_absent","termid":"PBO:0031838"}


id: MONDO:0006926
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with bacteria of the genus haemophilus.","definition_xrefs":["MESH:D006192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial infectious disease","termid":"MONDO:0005113"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"haemophilus infectious disease","secondary_identifiers":["EFO:1001127","NCIT:C34654","SCTID:41659003"],"synonyms":[{"name":"Haemophilus caused disease or disorder","type":"exact"},{"name":"Haemophilus disease or disorder","type":"exact"},{"name":"Haemophilus infection","type":"related"},{"name":"Haemophilus infectious disease","type":"exact"},{"name":"Hemophilus infection","type":"related"},{"name":"Hemophilus infections","type":"related"},{"name":"haemophilus infectious disease","type":"exact"},{"name":"infection, Haemophilus","type":"related"},{"name":"infection, Hemophilus","type":"related"},{"name":"infections, Haemophilus","type":"related"},{"name":"infections, Hemophilus","type":"related"}],"termid":"MONDO:0006926","xrefs":{"Monarch":{"xref_id":"0006926"}}}


id: PBO:0065069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prickle planar cell polarity protein 1","termid":"PBO:0065069"}


id: PBO:0051918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITGB2 antisense RNA 1","termid":"PBO:0051918"}


id: PBO:0029190
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_vacuolar_import","termid":"PBO:0029190"}


id: GO:0072161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the mesenchymal cells of the kidney as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in kidney development","termid":"GO:0061005"},{"relation_name":"is_a","term_name":"mesenchymal cell differentiation involved in renal system development","termid":"GO:2001012"},{"relation_name":"part_of","term_name":"kidney mesenchyme development","termid":"GO:0072074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal cell differentiation involved in kidney development","termid":"GO:0072161"}


id: PBO:0114072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient receptor potential cation channel subfamily A member 2, pseudogene","termid":"PBO:0114072"}


id: GO:0120219
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of a polarized cell that is just below the apical region. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue so the subapical region is further from the exposed surface and closer to the basal lamina.","definition_xrefs":["PMID:29891944","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"subapical part of cell","synonyms":[{"name":"subapical region of cell","type":"exact"}],"termid":"GO:0120219"}


id: GO:0052878
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O2 + linoleate = (8R,9Z,12Z)-8-hydroperoxyoctadeca-9,12-dienoate.","definition_xrefs":["RHEA:25395"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"linoleate 8R-lipoxygenase activity","secondary_identifiers":["KEGG_REACTION:R07061","MetaCyc:RXN-12756","EC:1.13.11.60"],"synonyms":[{"name":"5,8-LDS (bifunctional enzyme) activity","type":"related"},{"name":"5,8-linoleate diol synthase (bifunctional enzyme) activity","type":"related"},{"name":"7,8-LDS (bifunctional enzyme) activity","type":"related"},{"name":"7,8-linoleate diol synthase (bifunctional enzyme) activity","type":"related"},{"name":"linoleate diol synthase activity","type":"related"}],"termid":"GO:0052878"}


id: MONDO:1011191
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Synovial chondromatosis that occurs in great horned owl.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"synovial chondromatosis, non-human animal","termid":"MONDO:1010304"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synovial chondromatosis, great horned owl","secondary_identifiers":["OMIA:001174-56268"],"termid":"MONDO:1011191","xrefs":{"Monarch":{"xref_id":"1011191"}}}


id: PBO:0050519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox D4","termid":"PBO:0050519"}


id: GO:0016463
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Zn2+(in) = ADP + phosphate + Zn2+(out).","definition_xrefs":["RHEA:20621"],"direct_ancestors":[{"relation_name":"is_a","term_name":"zinc ion transmembrane transporter activity","termid":"GO:0005385"},{"relation_name":"is_a","term_name":"P-type ion transporter activity","termid":"GO:0015662"},{"relation_name":"is_a","term_name":"ATPase-coupled monoatomic cation transmembrane transporter activity","termid":"GO:0019829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"P-type zinc transporter activity","secondary_identifiers":["MetaCyc:RXN0-5205","EC:7.2.2.12"],"synonyms":[{"name":"ATP phosphohydrolase (Zn2+-exporting)","type":"exact"},{"name":"P(1B)-type ATPase activity","type":"narrow"},{"name":"P1B-type ATPase activity","type":"related"},{"name":"Zn(2+)-exporting ATPase activity","type":"related"},{"name":"Zn2+-exporting ATPase activity","type":"related"},{"name":"zinc exporting ATPase activity","type":"broad"},{"name":"zinc transmembrane transporter activity, phosphorylative mechanism","type":"related"},{"name":"zinc-exporting ATPase activity","type":"related"},{"name":"zinc-translocating P-type ATPase activity","type":"exact"}],"termid":"GO:0016463"}


id: MONDO:0002343
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hemangioma arising from the spleen.","definition_xrefs":["NCIT:C8541"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intra-abdominal hemangioma","termid":"MONDO:0002337"},{"relation_name":"is_a","term_name":"benign neoplasm of spleen","termid":"MONDO:0021500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"splenic hemangioma","secondary_identifiers":["DOID:256","SCTID:93472004","MEDGEN:151930","UMLS:C0685201"],"synonyms":[{"name":"angioma of spleen","type":"exact"},{"name":"angioma of the spleen","type":"exact"},{"name":"hemangioma of spleen","type":"exact"},{"name":"hemangioma of the spleen","type":"exact"},{"name":"spleen angioma","type":"exact"},{"name":"spleen hemangioma","type":"exact"},{"name":"splenic angioma","type":"exact"},{"name":"splenic hemangioma","type":"exact"}],"termid":"MONDO:0002343","xrefs":{"Monarch":{"xref_id":"0002343"}}}


id: GO:0018974
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 2,4,6-trinitrotoluene, 1-methyl-2,4,6-trinitrobenzene, a highly explosive pale yellow crystalline solid. It is prepared from toluene treated with concentrated sulfuric and nitric acids and is used in shells, bombs, and blasting explosives.","definition_xrefs":["ISBN:0333781767"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trinitrotoluene metabolic process","termid":"GO:0018973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"2,4,6-trinitrotoluene metabolic process","synonyms":[{"name":"2,4,6-trinitrotoluene metabolism","type":"exact"},{"name":"TNT metabolic process","type":"exact"},{"name":"TNT metabolism","type":"exact"}],"termid":"GO:0018974"}


id: PBO:0033759
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_exit_from_meiosis","termid":"PBO:0033759"}


id: GO:0160030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of pollen intine, the inner layer of the pollen wall. The reticulate pollen wall pattern consists of two layers, exine and intine.","definition_xrefs":["PMID:35498668"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pollen wall assembly","termid":"GO:0010208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"pollen intine formation","termid":"GO:0160030"}


id: GO:0016572
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histones by addition of phosphate groups.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete histone phosphorylation (obsolete GO:0016572)","termid":"GO:0016572"}


id: PBO:0083969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glucoamylase (glucan 1,4-alpha-glucosidase); extracellular enzyme needed for utilization of starch and oligosaccharides","termid":"PBO:0083969"}


id: GO:2000899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a xyloglucan.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucan catabolic process","termid":"GO:0009251"},{"relation_name":"is_a","term_name":"xyloglucan metabolic process","termid":"GO:0010411"},{"relation_name":"is_a","term_name":"hemicellulose catabolic process","termid":"GO:2000895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0071554"],"is_obsolete":false,"name":"xyloglucan catabolic process","synonyms":[{"name":"xyloglucan catabolism","type":"exact"}],"termid":"GO:2000899"}


id: MONDO:0004728
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"diabetic retinopathy","termid":"MONDO:0005266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005066"],"is_obsolete":false,"name":"diabetic macular edema","secondary_identifiers":["SCTID:312912001","UMLS:C0730285","DOID:9191","EFO:0009321","ICD9:362.07","MEDGEN:676494"],"termid":"MONDO:0004728","xrefs":{"Monarch":{"xref_id":"0004728"}}}


id: PATO:0000399
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000399 life span value (obsolete PATO:0000399)","termid":"PATO:0000399"}


id: PBO:0029468
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_glucose_binding","termid":"PBO:0029468"}


id: MONDO:0014190
data:
  {"annotated_genes":["SJAG_00997","SJAG_04885"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87710,87711],"is_not":false,"summary":null,"term":"MONDO:0014190"}]},"cv_name":"mondo","definition":"Any combined oxidative phosphorylation deficiency in which the cause of the disease is a mutation in the ELAC2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00997":null,"SJAG_04885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"combined oxidative phosphorylation defect type 17","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:17589","UMLS:C3809526","DOID:0111496","MEDGEN:815856","OMIM:615440","Orphanet:369913"],"synonyms":[{"name":"COXPD17","type":"exact"},{"name":"ELAC2 combined oxidative phosphorylation deficiency","type":"exact"},{"name":"combined oxidative phosphorylation deficiency 17","type":"related"},{"name":"combined oxidative phosphorylation deficiency caused by mutation in ELAC2","type":"exact"},{"name":"combined oxidative phosphorylation deficiency type 17","type":"exact"}],"termid":"MONDO:0014190","terms_by_termid":{"MONDO:0014190":null},"xrefs":{"Monarch":{"xref_id":"0014190"}}}


id: _global:instance_of
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_relations","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"instance_of","termid":"_global:instance_of"}


id: MONDO:0012567
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autism, susceptiblity to","termid":"MONDO:0020836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autism, susceptibility to, 12","secondary_identifiers":["MEDGEN:410089","UMLS:C1970511","OMIM:610838"],"synonyms":[{"name":"AUTS12","type":"exact"},{"name":"autism susceptibility 12","type":"exact"},{"name":"autism, susceptibility to, 12","type":"exact"}],"termid":"MONDO:0012567","xrefs":{"Monarch":{"xref_id":"0012567"}}}


id: PBO:0049173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth factor receptor bound protein 2","termid":"PBO:0049173"}


id: GO:0080145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of cysteine within a cell.","definition_xrefs":["PMID:19955263"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular amino acid homeostasis","termid":"GO:0080144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular cysteine homeostasis","synonyms":[{"name":"cellular cysteine homeostasis","type":"exact"},{"name":"cysteine homeostasis","type":"exact"}],"termid":"GO:0080145"}


id: PBO:0078082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking protein particle complex subunit 2B","termid":"PBO:0078082"}


id: GO:0042627
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A large lipoprotein particle (diameter 75-1200 nm) composed of a central core of triglycerides and cholesterol surrounded by a protein-phospholipid coating. The proteins include one molecule of apolipoprotein B-48 and may include a variety of apolipoproteins, including APOAs, APOCs and APOE. Chylomicrons are found in blood or lymph and carry lipids from the intestines into other body tissues.","definition_xrefs":["PMID:10580165","GOC:jl","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma lipoprotein particle","termid":"GO:0034358"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005576"],"is_obsolete":false,"name":"chylomicron","secondary_identifiers":["Wikipedia:Chylomicron"],"termid":"GO:0042627"}


id: GO:0035596
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the addition of a methylthioether group (-SCH3) to a nucleic acid or protein acceptor.","definition_xrefs":["PMID:20472640","GOC:jh2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkylthioltransferase activity","termid":"GO:0050497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016782","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"methylthiotransferase activity","synonyms":[{"name":"MTTase","type":"exact"}],"termid":"GO:0035596"}


id: PBO:0088231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-phosphofructo-2-kinase","termid":"PBO:0088231"}


id: SO:0001210
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The region of mRNA (not divisible by 3 bases) that is skipped or added during the process of translational frameshifting (GO:0006452), causing the reading frame to be different.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA_region","termid":"SO:0000836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translational_frameshift","secondary_identifiers":["http://en.wikipedia.org/wiki/Translational_frameshift"],"synonyms":[{"name":"INSDC_qualifier:ribosomal_slippage","type":"exact"},{"name":"ribosomal frameshift","type":"exact"},{"name":"ribosomal slippage","type":"exact"},{"name":"translational frameshift","type":"exact"}],"termid":"SO:0001210"}


id: PBO:0087836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Thioredoxin peroxidase; acts as both ribosome-associated and free cytoplasmic antioxidant; self-associates to form a HMW chaperone complex under oxidative stress; chaperone activity essential for growth in zinc deficiency; hydrogen peroxide receptor and signal transducer in a light sensing pathway; required for telomere length maintenance; binds and modulates Cdc19p activity; protein abundance increases and forms cytoplasmic foci during DNA replication stress","termid":"PBO:0087836"}


