# terms

id: PBO:0049778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 11","termid":"PBO:0049778"}


id: PBO:0088913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome C1D family subunit Cti1","termid":"PBO:0088913"}


id: PBO:0044102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 47 member A10","termid":"PBO:0044102"}


id: PBO:0029692
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromosome_morphology,_single_irregular_mass","termid":"PBO:0029692"}


id: GO:0140148
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Gel formed of proteglycans filling the basement membrane ECM space.","definition_xrefs":["PMID:21421915","PMID:28324731"],"direct_ancestors":[{"relation_name":"is_a","term_name":"external encapsulating structure","termid":"GO:0030312"},{"relation_name":"part_of","term_name":"basement membrane","termid":"GO:0005604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"gel phase of basement membrane","termid":"GO:0140148"}


id: PBO:0077620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymosin beta 10 pseudogene 1","termid":"PBO:0077620"}


id: PR:Q9Y7L1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phosducin-like protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03496","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosducin-like protein C2A9.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2A9.09","secondary_identifiers":["UniProtKB:Q9Y7L1"],"synonyms":[{"name":"Spom972h-PDCL2","type":"exact"}],"termid":"PR:Q9Y7L1"}


id: PBO:0119272
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human REEP3","termid":"PBO:0119272"}


id: GO:0007590
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving the fat body. A fat body is a fat-containing cellular structure which serves as an energy reserve. As in, but not restricted to, the true insects (Insecta, ncbi_taxonomy_id:50557).","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete fat body metabolic process (sensu Insecta) (obsolete GO:0007590)","synonyms":[{"name":"fat body metabolic process (sensu Insecta)","type":"exact"}],"termid":"GO:0007590"}


id: PBO:0120116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endo-beta-1,3-glucanase; major component of the cell wall involved in cell wall maintenance; involved in incorporation of newly synthesized mannoprotein molecules into the cell wall; C-terminal region can form fibrillar structures and has amyloidogenic potential","termid":"PBO:0120116"}


id: GO:0005170
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a neurotrophin TRKC receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotrophin TRK receptor binding","termid":"GO:0005167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"neurotrophin TRKC receptor binding","synonyms":[{"name":"neurotrophin TRKC receptor ligand","type":"narrow"}],"termid":"GO:0005170"}


id: GO:1901213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the development of the heart over time.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in heart development (obsolete GO:1901213)","synonyms":[{"name":"global transcription regulation from Pol II promoter involved in cardiac development","type":"related"},{"name":"global transcription regulation from Pol II promoter involved in dorsal vessel development","type":"related"},{"name":"global transcription regulation from Pol II promoter involved in heart development","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter involved in cardiac development","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter involved in dorsal vessel development","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter involved in heart development","type":"related"},{"name":"regulation of global transcription from Pol II promoter involved in cardiac development","type":"related"},{"name":"regulation of global transcription from Pol II promoter involved in dorsal vessel development","type":"related"},{"name":"regulation of global transcription from Pol II promoter involved in heart development","type":"related"},{"name":"regulation of transcription from Pol II promoter involved in cardiac development","type":"related"},{"name":"regulation of transcription from Pol II promoter involved in dorsal vessel development","type":"narrow"},{"name":"regulation of transcription from Pol II promoter involved in heart development","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter involved in cardiac development","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter involved in dorsal vessel development","type":"narrow"},{"name":"regulation of transcription from RNA polymerase II promoter, global involved in cardiac development","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter, global involved in dorsal vessel development","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter, global involved in heart development","type":"related"}],"termid":"GO:1901213"}


id: PBO:0048999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPC6 antisense RNA 1","termid":"PBO:0048999"}


id: GO:0008132
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of proteins, including elastin.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete pancreatic elastase activity (obsolete GO:0008132)","synonyms":[{"name":"pancreatic elastase activity","type":"exact"}],"termid":"GO:0008132"}


id: PBO:0051710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin","termid":"PBO:0051710"}


id: PBO:0081284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 69","termid":"PBO:0081284"}


id: GO:1990254
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a keratin filament, an intermediate filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells.","definition_xrefs":["GOC:krc","PMID:6170061"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intermediate filament binding","termid":"GO:0019215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"keratin filament binding","termid":"GO:1990254"}


id: PBO:0078792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (GTT) 15-1","termid":"PBO:0078792"}


id: SO:0002369
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A scaRNA possessing a box C/D sequence motif, guiding the methylation of snRNAs.","definition_xrefs":["PMID:24659245","PMID:17099227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"scaRNA","termid":"SO:0002095"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C_D_box_scaRNA","synonyms":[{"name":"C/D scaRNA","type":"exact"}],"termid":"SO:0002369"}


id: GO:0061658
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Isoenergetic transfer of URM1 from one protein to another via the reaction X-URM1 + Y = Y-URM1 + X, where both the X-URM1 and Y-URM1 linkages are thioester bonds between the C-terminal amino acid of URM1 and a sulfhydryl side group of a cysteine residue.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"URM1 transferase activity","termid":"GO:0042294"},{"relation_name":"is_a","term_name":"ubiquitin-like protein conjugating enzyme activity","termid":"GO:0061650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0140096","GO:0003674","GO:0019787","GO:0016746"],"is_obsolete":false,"name":"URM1 conjugating enzyme activity","synonyms":[{"name":"E2","type":"broad"}],"termid":"GO:0061658"}


id: PBO:0028961
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_glycoprotein_glycan_structure","termid":"PBO:0028961"}


id: PBO:0081869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 808","termid":"PBO:0081869"}


id: PBO:0064597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 2 homeobox associating factor 3","termid":"PBO:0064597"}


id: MONDO:0006479
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare variant of undifferentiated pancreatic carcinoma characterized by the presence of non-neoplastic osteoclast-like giant cells.","definition_xrefs":["NCIT:C5723"],"direct_ancestors":[{"relation_name":"is_a","term_name":"undifferentiated pancreatic carcinoma","termid":"MONDO:0006478"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"undifferentiated pancreatic carcinoma with osteoclast-like giant cells","secondary_identifiers":["EFO:1000607","MEDGEN:389157","Orphanet:424080","DOID:7718","UMLS:C2007059","GARD:21782"],"synonyms":[{"name":"OGCT of pancreas","type":"exact"},{"name":"osteoclast-like giant cell neoplasm of pancreas","type":"exact"},{"name":"osteoclast-like giant cell neoplasm of the pancreas","type":"exact"},{"name":"osteoclastic giant cell tumor of pancreas","type":"exact"},{"name":"osteoclastic giant cell tumour of pancreas","type":"exact"},{"name":"pancreatic osteoclast-like giant cell carcinoma","type":"exact"},{"name":"pancreatic osteoclastic giant cell tumor","type":"exact"},{"name":"pancreatic osteoclastic giant cell tumour","type":"exact"},{"name":"pancreatic undifferentiated carcinoma with osteoclast-like giant cells","type":"exact"},{"name":"undifferentiated carcinoma of pancreas with osteoclast-like giant cells","type":"exact"},{"name":"undifferentiated pancreatic carcinoma with osteoclast-like giant cells","type":"exact"}],"termid":"MONDO:0006479","xrefs":{"Monarch":{"xref_id":"0006479"}}}


id: PBO:0051515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IKAROS family zinc finger 5","termid":"PBO:0051515"}


id: MONDO:0009930
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Pulmonary arteriovenous malformation (PAVM) describes an anatomic communication between a pulmonary artery and a pulmonary vein leading to a right to left extracardiac shunt that can be asymptomatic or can lead to varying manifestations such as dyspnea, hemoptysis, and neurological symptoms.","definition_xrefs":["Orphanet:2038"],"gene_count":0,"genotype_count":0,"name":"obsolete pulmonary arteriovenous malformation (obsolete MONDO:0009930)","secondary_identifiers":["NANDO:2200295","OMIM:265140","SCTID:303070000","icd11.foundation:913404991","MedDRA:10037332","MESH:C562404","NCIT:C99029","HP:0006548"],"synonyms":[{"name":"PAVM","type":"exact"},{"name":"arteriovenous fistula of pulmonary vessels","type":"exact"},{"name":"pulmonar arteriovenous aneurysm","type":"related"},{"name":"pulmonary AV fistula","type":"exact"},{"name":"pulmonary arterio-veinous fistula","type":"related"},{"name":"pulmonary arteriovenous fistula","type":"exact"},{"name":"pulmonary arteriovenous fistulas","type":"related"},{"name":"pulmonary arteriovenous malformation","type":"exact"},{"name":"pulmonary arteriovenous malformation (disease)","type":"exact"}],"termid":"MONDO:0009930","xrefs":{"Monarch":{"xref_id":"0009930"}}}


id: PBO:0114283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal membrane E2 ubiquitin-conjugating activity activator Pex22","termid":"PBO:0114283"}


id: GO:0019066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The translocation of an entire virus particle across the host cell plasma membrane.","definition_xrefs":["ISBN:0781702534"],"gene_count":0,"genotype_count":0,"name":"obsolete translocation of virus into host cell (obsolete GO:0019066)","synonyms":[{"name":"translocation of virus into host cell","type":"exact"},{"name":"viral translocation","type":"exact"}],"termid":"GO:0019066"}


id: FYPO:0000330
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle that affects histone modification.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification during vegetative growth","termid":"FYPO:0000329"},{"relation_name":"is_a","term_name":"abnormal histone modification","termid":"FYPO:0006458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0000002","FYPO:0002494","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abnormal histone modification during vegetative growth","synonyms":[{"name":"abnormal histone modification during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000330"}


id: PR:P50523
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cytochrome b-c1 complex subunit 8 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12119:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b-c1 complex subunit 8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1782.07","secondary_identifiers":["UniProtKB:P50523"],"synonyms":[{"name":"SPAC1782.07","type":"related"},{"name":"Spom972h-UQCRQ","type":"exact"},{"name":"complex III subunit 8 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquinol-cytochrome c reductase complex 11 kDa protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P50523"}


id: PBO:0053691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 886","termid":"PBO:0053691"}


id: PR:O74756
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- chs2 gene.","definition_xrefs":["UniProtKB:O74756","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitin synthase-like protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1709.01","synonyms":[{"name":"Spom972h-chs2","type":"exact"}],"termid":"PR:O74756"}


id: PATO:0002247
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's having or lacking of substances produced by living organisms that have a color resulting from selective color absorption.","direct_ancestors":[{"relation_name":"correlates_with","term_name":"color","termid":"PATO:0000014"},{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"degree of pigmentation","termid":"PATO:0002247"}


id: PBO:0113417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding protein involved in asymmetric localization of ASH1 mRNA; represses translation of ASH1 mRNA, an effect reversed by Yck1p-dependent phosphoryation; regulates telomere position effect and length; similarity to hnRNP-K; increases mRNA stability by binding (CNN)n repeat elements","termid":"PBO:0113417"}


id: GO:0060089
data:
  {"annotated_genes":["SJAG_01699","SJAG_01345","SJAG_06592","SJAG_02860","SJAG_02847","SJAG_02823","SJAG_02472","SJAG_01978","SJAG_02080","SJAG_00331","SJAG_02258","SJAG_00318"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[121517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009882"},{"annotations":[117397],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990576"},{"annotations":[79620,70239],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009927"},{"annotations":[77127],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004932"},{"annotations":[89958],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036320"},{"annotations":[110289],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140897"},{"annotations":[71209,61397],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000156"},{"annotations":[74540,107359,75921],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0038023"}]},"cv_name":"molecular_function","definition":"A compound molecular function in which an effector function is controlled by one or more regulatory components.","definition_xrefs":["GOC:dos","GOC:pdt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_function","termid":"GO:0003674"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00318":null,"SJAG_00331":null,"SJAG_01345":null,"SJAG_01699":null,"SJAG_01978":null,"SJAG_02080":null,"SJAG_02258":null,"SJAG_02472":null,"SJAG_02823":null,"SJAG_02847":null,"SJAG_02860":null,"SJAG_06592":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"molecular transducer activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null,"PMID:23873862":null},"termid":"GO:0060089","terms_by_termid":{"GO:0000156":null,"GO:0004932":null,"GO:0009882":null,"GO:0009927":null,"GO:0036320":null,"GO:0038023":null,"GO:0140897":null,"GO:1990576":null}}


id: PBO:0028815
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_primary_amine_oxidase_activity","termid":"PBO:0028815"}


id: GO:0072495
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A class of nuclear body in the eukaryotic host cell, first seen after silver staining by Ramon y Cajal in 1903, enriched in small nuclear ribonucleoproteins, and certain general RNA polymerase II transcription factors; ultrastructurally, they appear as a tangle of coiled, electron-dense threads roughly 0.5 micrometers in diameter; involved in aspects of snRNP biogenesis; the protein coilin serves as a marker for Cajal bodies. Some argue that Cajal bodies are the sites for preassembly of transcriptosomes, unitary particles involved in transcription and processing of RNA. The host is the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell nuclear part","termid":"GO:0044094"},{"relation_name":"part_of","term_name":"host cell nucleoplasm","termid":"GO:0044095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell Cajal body","synonyms":[{"name":"coiled body of host","type":"exact"},{"name":"host cell coiled body","type":"exact"}],"termid":"GO:0072495"}


id: FYPO:0002161
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing Calcofluor White.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002058","FYPO:0002057","FYPO:0000139","FYPO:0000257","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on Calcofluor White","synonyms":[{"name":"normal cell population growth in presence of Calcofluor White","type":"exact"},{"name":"normal cell population growth on Calcofluor White","type":"exact"},{"name":"normal cellular response to Calcofluor White","type":"related"},{"name":"normal vegetative cell population growth on Calcofluor White","type":"exact"}],"termid":"FYPO:0002161"}


id: GO:0033846
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + fluoride = 5'-deoxy-5'-fluoroadenosine + L-methionine.","definition_xrefs":["EC:2.5.1.63"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016765","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"adenosyl-fluoride synthase activity","secondary_identifiers":["MetaCyc:2.5.1.63-RXN","RHEA:16661"],"synonyms":[{"name":"S-adenosyl-L-methionine:fluoride adenosyltransferase activity","type":"related"},{"name":"fluorinase activity","type":"related"}],"termid":"GO:0033846"}


id: PBO:0034608
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_number_of_cells_with_1C_DNA_content","termid":"PBO:0034608"}


id: PBO:0071989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 pseudogene 18","termid":"PBO:0071989"}


id: GO:0072725
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 4-nitroquinoline N-oxide stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to 4-nitroquinoline N-oxide","termid":"GO:0072724"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to 4-nitroquinoline N-oxide","termid":"GO:0072725"}


id: PBO:0030986
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_metabolic_process_during_vegetative_growth","termid":"PBO:0030986"}


id: GO:0060028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic process in which an epithelium narrows along one axis and lengthens in a perpendicular axis contributing to the lengthening of the axis of an organism.","definition_xrefs":["GOC:dph","PMID:12062082"],"direct_ancestors":[{"relation_name":"is_a","term_name":"convergent extension","termid":"GO:0060026"},{"relation_name":"part_of","term_name":"axis elongation","termid":"GO:0003401"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"convergent extension involved in axis elongation","termid":"GO:0060028"}


id: GO:0035202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of the tracheal pits, the first tube-like structures to form in the open tracheal system. Once cells are determined to their tracheal cell fate, the tracheal pits arise by invagination of each ectodermal cluster of tracheal placode cells, between 5 and 7 hours after egg laying. An example of this is found in Drosophila melanogaster.","definition_xrefs":["PMID:11992723","GOC:mtg_sensu","PMID:11063940","PMID:14570584"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"open tracheal system development","termid":"GO:0007424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tracheal pit formation in open tracheal system","synonyms":[{"name":"tracheal placode invagination","type":"related"},{"name":"tracheal sac formation","type":"broad"}],"termid":"GO:0035202"}


id: SO:0001739
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene with a start codon other than AUG.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"contains","term_name":"non_canonical_start_codon","termid":"SO:0000680"},{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_with_non_canonical_start_codon","synonyms":[{"name":"gene with non canonical start codon","type":"exact"}],"termid":"SO:0001739"}


id: MOD:00871
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification produced by formation of an adduct with (2)H5-phenyl isocyanate.","definition_xrefs":["Unimod:412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenyl isocyanate derivatized residue","termid":"MOD:00870"},{"relation_name":"is_a","term_name":"(2)H deuterium tagged reagent","termid":"MOD:01431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(2)H5-phenyl isocyanate derivatized residue","synonyms":[{"name":"Phenylisocyanate:2H(5)","type":"related"},{"name":"d5-phenyl isocyanate","type":"related"}],"termid":"MOD:00871"}


id: PBO:0066076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid receptor responder 2 pseudogene 4","termid":"PBO:0066076"}


id: PBO:0089153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOPS/CORVET complex subunit Vps16","termid":"PBO:0089153"}


id: SO:0000350
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An inversion site found on the Saccharomyces cerevisiae 2 micron plasmid.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inversion_site","termid":"SO:0000948"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FRT_site","synonyms":[{"name":"FLP recombination target region","type":"exact"},{"name":"FRT site","type":"exact"}],"termid":"SO:0000350"}


id: GO:0042246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regrowth of lost or destroyed tissues.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regeneration","termid":"GO:0031099"},{"relation_name":"is_a","term_name":"developmental growth","termid":"GO:0048589"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tissue regeneration","termid":"GO:0042246"}


id: PBO:0079393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 4B class IVb","termid":"PBO:0079393"}


id: GO:0012511
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A subcellular organelle of plant cells surrounded by 'half-unit' or a monolayer membrane instead of the more usual bilayer. The storage body has a droplet of triglyceride surrounded by a monolayer of phospholipids, interacting with the triglycerides and the hydrophilic head groups facing the cytosol, and containing major protein components called oleosins.","definition_xrefs":["GOC:mtg_sensu","ISBN:0943088372"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid droplet","termid":"GO:0005811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"monolayer-surrounded lipid storage body","secondary_identifiers":["GO:0009520","Wikipedia:Oil_body"],"synonyms":[{"name":"oil body","type":"exact"},{"name":"oilbody","type":"exact"},{"name":"oleosome","type":"exact"},{"name":"spherosome","type":"exact"}],"termid":"GO:0012511"}


id: PBO:0062864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OTU deubiquitinase 1","termid":"PBO:0062864"}


id: MONDO:0005265
data:
  {"annotated_genes":["SJAG_03363","SJAG_03136"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89176],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012610"},{"annotations":[89180],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012831"}]},"cv_name":"mondo","definition":"A spectrum of small and large bowel inflammatory diseases of unknown etiology. It includes Crohn's disease, ulcerative colitis, and colitis of indeterminate type.","definition_xrefs":["NCIT:C3138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"},{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03136":null,"SJAG_03363":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"inflammatory bowel disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0050589","MEDGEN:43877","OMIMPS:266600","EFO:0003767","MESH:D015212","ICD9:558.9","NANDO:2100259","SCTID:24526004","UMLS:C0021390"],"synonyms":[{"name":"IBD","type":"exact"},{"name":"autoimmune bowel disorder","type":"exact"},{"name":"inflammatory bowel disease","type":"exact"}],"termid":"MONDO:0005265","terms_by_termid":{"MONDO:0012610":null,"MONDO:0012831":null},"xrefs":{"Monarch":{"xref_id":"0005265"}}}


id: PBO:0057898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3200","termid":"PBO:0057898"}


id: MONDO:0008252
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet adenylate cyclase activity","secondary_identifiers":["OMIM:173395","UMLS:C1868264","MEDGEN:358164"],"synonyms":[{"name":"platelet adenylate cyclase activity","type":"exact"}],"termid":"MONDO:0008252","xrefs":{"Monarch":{"xref_id":"0008252"}}}


id: PBO:0082458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ca2+-dependent cysteine protease; may cleave specific substrates during the stress response; regulates apoptosis upon H2O2 treatment; required for clearance of insoluble protein aggregates during normal growth; implicated in cell cycle dynamics and lifespan extension; undergoes autocatalytic processing; similar to mammalian metacaspases, but exists as a monomer due to an extra pair of anti-parallel beta-strands that block potential dimerization","termid":"PBO:0082458"}


id: PBO:0034707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA methyltransferase Tgs1","termid":"PBO:0034707"}


id: MONDO:0006530
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A pathologic process characterized by the proliferation of keratinizing squamous epithelium resulting in the accumulation of keratin and cells in the middle ear and/or mastoid. It may be congenital or acquired. If left untreated, it may increase in size and destroy adjacent structures.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"keratosis","termid":"MONDO:0006566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"cholesteatoma","secondary_identifiers":["NCIT:C2944","MEDGEN:3043","SCTID:363668000","UMLS:C0008373","EFO:1000675","DOID:869","ICD9:385.30","MESH:D002781","HP:0009797"],"synonyms":[{"name":"cholesteatoma","type":"exact"},{"name":"cholesteatoma (disease)","type":"exact"},{"name":"congenital cholesteatoma (type)","type":"related"},{"name":"primary acquired cholesteatoma (type)","type":"related"},{"name":"secondary acquired cholesteatoma (type)","type":"related"}],"termid":"MONDO:0006530","xrefs":{"Monarch":{"xref_id":"0006530"}}}


id: PBO:0065815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB4A, member RAS oncogene family","termid":"PBO:0065815"}


id: PBO:0052499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 11","termid":"PBO:0052499"}


id: MONDO:0000532
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lung combined type small cell carcinoma that has material basis in epithelial tissue of glandular origin.","definition_xrefs":["DOID:0050917"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined small cell lung carcinoma","termid":"MONDO:0003438"},{"relation_name":"is_a","term_name":"lung adenocarcinoma","termid":"MONDO:0005061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"lung combined type small cell adenocarcinoma","secondary_identifiers":["NCIT:C9379","UMLS:C1332165","MEDGEN:231029"],"termid":"MONDO:0000532","xrefs":{"Monarch":{"xref_id":"0000532"}}}


id: MONDO:0014370
data:
  {"annotated_genes":["SJAG_04902"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88219],"is_not":false,"summary":null,"term":"MONDO:0014370"}]},"cv_name":"mondo","definition":"Any non-syndromic pontocerebellar hypoplasia in which the cause of the disease is a mutation in the VPS53 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pontocerebellar hypoplasia","termid":"MONDO:0020135"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04902":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"pontocerebellar hypoplasia type 2E","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:615851","MEDGEN:862925","GARD:18348","UMLS:C4014488","DOID:0060271"],"synonyms":[{"name":"PCH2E","type":"related"},{"name":"VPS53 non-syndromic pontocerebellar hypoplasia","type":"exact"},{"name":"non-syndromic pontocerebellar hypoplasia caused by mutation in VPS53","type":"exact"},{"name":"pontocerebellar hypoplasia type 2E","type":"exact"},{"name":"pontocerebellar hypoplasia, type 2E","type":"related"}],"termid":"MONDO:0014370","terms_by_termid":{"MONDO:0014370":null},"xrefs":{"Monarch":{"xref_id":"0014370"}}}


id: PBO:0079805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 2 member B26, pseudogene","termid":"PBO:0079805"}


id: SO:0001872
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a chromosome, where the chromosome has undergone a large structural rearrangement that altered the genome organization. There is no longer synteny to the reference genome.","definition_xrefs":["NCBI:th","PMID:18564416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"},{"relation_name":"is_a","term_name":"structural_alteration","termid":"SO:0001785"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rearrangement_region","synonyms":[{"name":"rearrangement region","type":"exact"}],"termid":"SO:0001872"}


id: PBO:0078769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 2-1","termid":"PBO:0078769"}


id: PBO:0059155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallophosphoesterase 1","termid":"PBO:0059155"}


id: PBO:0057977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3692","termid":"PBO:0057977"}


id: GO:0140021
data:
  {"annotated_genes":["SJAG_02050"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59189],"is_not":false,"summary":null,"term":"GO:0140021"}]},"cv_name":"biological_process","definition":"The process in which ADP is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["PMID:2541251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ADP transport","termid":"GO:0015866"},{"relation_name":"is_a","term_name":"purine-containing compound transmembrane transport","termid":"GO:0072530"},{"relation_name":"is_a","term_name":"nucleotide transmembrane transport","termid":"GO:1901679"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02050":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"mitochondrial ADP transmembrane transport","references_by_uniquename":{"GO_REF:0000002":null},"termid":"GO:0140021","terms_by_termid":{"GO:0140021":null}}


id: PATO:0000447
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000447 decreased percentage (obsolete PATO:0000447)","termid":"PATO:0000447"}


id: PBO:0065650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase receptor type C associated protein","termid":"PBO:0065650"}


id: PBO:0027340
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_glutathione_synthase_activity","termid":"PBO:0027340"}


id: GO:0033151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which immune receptor V, D, and J, or V and J gene segments, depending on the specific receptor, are recombined within a single locus utilizing the conserved heptamer and nonomer recombination signal sequences (RSS).","definition_xrefs":["GOC:add","ISBN:0781700221","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic diversification of immune receptors via germline recombination within a single locus","termid":"GO:0002562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0008150","GO:0006310","GO:0006259"],"is_obsolete":false,"name":"V(D)J recombination","secondary_identifiers":["Wikipedia:V(D)J_recombination"],"synonyms":[{"name":"V(D)J joining","type":"exact"},{"name":"V-D-J joining","type":"exact"},{"name":"V-D-J recombination","type":"exact"},{"name":"V-J joining","type":"exact"},{"name":"V-J recombination","type":"exact"}],"termid":"GO:0033151"}


id: PR:P40231
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cka1 gene.","definition_xrefs":["UniProtKB:P40231","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase II subunit alpha (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C11.11","synonyms":[{"name":"CK II subunit alpha (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC23C11.11","type":"related"},{"name":"Spom972h-cka1","type":"exact"},{"name":"orb5","type":"related"}],"termid":"PR:P40231"}


id: GO:0005607
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A laminin complex composed of alpha2, beta1 and gamma1 polypeptide chains.","definition_xrefs":["PMID:10842354","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laminin complex","termid":"GO:0043256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"laminin-2 complex","synonyms":[{"name":"laminin-211 complex","type":"exact"}],"termid":"GO:0005607"}


id: PBO:0004820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-C","termid":"PBO:0004820"}


id: MONDO:0009642
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Oral-facial-digital (OFD) type 2 is characterized by hand and feet deformities, facial deformities, midline cleft of the upper lip and tongue hamartomas.","definition_xrefs":["Orphanet:2751"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"orofaciodigital syndrome","termid":"MONDO:0015375"},{"relation_name":"is_a","term_name":"short rib dysplasia","termid":"MONDO:0019691"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"orofaciodigital syndrome type II","secondary_identifiers":["UMLS:C0026363","MEDGEN:10077","OMIM:252100","ICD9:759.89","GARD:3701","SCTID:1779005","DOID:0060959"],"synonyms":[{"name":"MOHR syndrome","type":"exact"},{"name":"Mohr syndrome","type":"exact"},{"name":"OFD syndrome 2","type":"related"},{"name":"OFD2","type":"exact"},{"name":"Ofds 2","type":"related"},{"name":"oral facial digital syndrome 2","type":"related"},{"name":"oral facial digital syndrome type 2","type":"related"},{"name":"oral-Facial-digital syndrome, type 2","type":"related"},{"name":"oral-facial-digital syndrome type 2","type":"exact"},{"name":"orofaciodigital syndrome 2","type":"related"},{"name":"orofaciodigital syndrome II","type":"related"},{"name":"orofaciodigital syndrome type 2","type":"related"}],"termid":"MONDO:0009642","xrefs":{"Monarch":{"xref_id":"0009642"}}}


id: PBO:0057421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548w","termid":"PBO:0057421"}


id: PBO:0064536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase mitochondrial pseudogene 1","termid":"PBO:0064536"}


id: SO:0002136
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A joining gene that rearranges at the DNA level and codes the joining region of the variable domain of aT-cell receptor chain.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html","IGMT:http://www.imgt.org/IMGTScientificChart/SequenceDescription/Keywords.php"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T_cell_receptor_gene","termid":"SO:0002133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TR_J_Gene","synonyms":[{"name":"T_cell_receptor_J_gene","type":"exact"}],"termid":"SO:0002136"}


id: MONDO:0004938
data:
  {"annotated_genes":["SJAG_01457"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89133],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007079"}]},"cv_name":"mondo","definition":"The psychological or physiological need to take a substance in order to experience its effects or to avoid the effects of its absence.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance-related disorder","termid":"MONDO:0002494"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01457":null},"genotype_count":0,"is_obsolete":false,"name":"substance dependence","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:304.60","MEDGEN:20989","NCIT:C35458","SCTID:2403008","DOID:9973","UMLS:C0038580"],"synonyms":[{"name":"dependence","type":"exact"}],"termid":"MONDO:0004938","terms_by_termid":{"MONDO:0007079":null},"xrefs":{"Monarch":{"xref_id":"0004938"}}}


id: PR:Q9P7C3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01384","PRO:DNx","PANTHER:PTHR11742:SF7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2E1P5.01c","secondary_identifiers":["UniProtKB:Q9P7C3"],"synonyms":[{"name":"ER alpha-1,2-mannosidase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Man(9)-alpha-mannosidase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-MAN1B1","type":"exact"}],"termid":"PR:Q9P7C3"}


id: GO:0006696
data:
  {"annotated_genes":["SJAG_03598","SJAG_00624","SJAG_04018","SJAG_03024","SJAG_04270","SJAG_03249","SJAG_03018","SJAG_00717","SJAG_02719","SJAG_04499","SJAG_00453","SJAG_00770","SJAG_02104","SJAG_03531","SJAG_02044","SJAG_02982","SJAG_01307","SJAG_01474","SJAG_03509","SJAG_04217","SJAG_04810","SJAG_00413","SJAG_03750","SJAG_03929","SJAG_03235","SJAG_00370","SJAG_02855","SJAG_03715"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[67130,71591,72662,73279,73483,74898,75702,76047,77879,78236,78244,78972,81865,82051,82077,90290,91476,96448,109367,109681,111091,111933,117093,118406],"is_not":false,"summary":null,"term":"GO:0006696"},{"annotations":[95695],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0010895"},{"annotations":[111699],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0070452"},{"annotations":[107668,90379],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032443"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ergosterol, (22E)-ergosta-5,7,22-trien-3-beta-ol, a sterol found in ergot, yeast and moulds.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ergosterol metabolic process","termid":"GO:0008204"},{"relation_name":"is_a","term_name":"sterol biosynthetic process","termid":"GO:0016126"},{"relation_name":"is_a","term_name":"phytosteroid biosynthetic process","termid":"GO:0016129"},{"relation_name":"is_a","term_name":"secondary alcohol biosynthetic process","termid":"GO:1902653"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00370":null,"SJAG_00413":null,"SJAG_00453":null,"SJAG_00624":null,"SJAG_00717":null,"SJAG_00770":null,"SJAG_01307":null,"SJAG_01474":null,"SJAG_02044":null,"SJAG_02104":null,"SJAG_02719":null,"SJAG_02855":null,"SJAG_02982":null,"SJAG_03018":null,"SJAG_03024":null,"SJAG_03235":null,"SJAG_03249":null,"SJAG_03509":null,"SJAG_03531":null,"SJAG_03598":null,"SJAG_03715":null,"SJAG_03750":null,"SJAG_03929":null,"SJAG_04018":null,"SJAG_04217":null,"SJAG_04270":null,"SJAG_04499":null,"SJAG_04810":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"ergosterol biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"ergosterol anabolism","type":"exact"},{"name":"ergosterol biosynthesis","type":"exact"},{"name":"ergosterol formation","type":"exact"},{"name":"ergosterol synthesis","type":"exact"}],"termid":"GO:0006696","terms_by_termid":{"GO:0006696":null,"GO:0010895":null,"GO:0032443":null,"GO:0070452":null}}


id: FYPO:0000013
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which cell length is normal, and a new growth zone forms along the lateral portion of the cell (often in the middle) before septation, such that a single cell grows in the form of the letter T.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T-shaped vegetative cell","termid":"FYPO:0007379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0005568"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0005568","FYPO:0001320","FYPO:0000004","FYPO:0001985","FYPO:0000005"],"is_obsolete":false,"name":"T-shaped vegetative cell with normal cell length","synonyms":[{"name":"T-shaped cell with normal cell length during vegetative growth","type":"exact"},{"name":"T-shaped vegetative cell with normal cell length during mitotic cell cycle","type":"related"},{"name":"cell morphology, T shaped with normal cell length during vegetative growth","type":"exact"}],"termid":"FYPO:0000013"}


id: PBO:0064830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP1R9A antisense RNA 1","termid":"PBO:0064830"}


id: GO:0034995
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consist of complement components C5b6 and C7 stably inserted in a cell membrane. Formation of the SC5b-7 complex is the first phase of membrane attack complex assembly.","definition_xrefs":["PMID:10090939"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"SC5b-7 complex","termid":"GO:0034995"}


id: MONDO:1010711
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Trimethylaminuria (fishy taint) that occurs in Japanese quail.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"trimethylaminuria (fishy taint), non-human animal","termid":"MONDO:1010104"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trimethylaminuria (fishy taint), Japanese quail","secondary_identifiers":["OMIA:001360-93934"],"termid":"MONDO:1010711","xrefs":{"Monarch":{"xref_id":"1010711"}}}


id: PBO:0084675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial asparaginyl-tRNA synthetase","termid":"PBO:0084675"}


id: MONDO:0013309
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the short arm of chromosome 2","termid":"MONDO:0016884"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2p12-p11.2 deletion syndrome","secondary_identifiers":["MEDGEN:462154","OMIM:613564","UMLS:C3150804","DOID:0060414"],"synonyms":[{"name":"chromosome 2p12-p11.2 deletion syndrome","type":"exact"}],"termid":"MONDO:0013309","xrefs":{"Monarch":{"xref_id":"0013309"}}}


id: GO:0050423
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: thiamine + 2 O2 = thiamine acetic acid + 2 H2O2.","definition_xrefs":["EC:1.1.3.23","MetaCyc:THIAMIN-OXIDASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"thiamine oxidase activity","secondary_identifiers":["RHEA:21280"],"synonyms":[{"name":"thiamin dehydrogenase activity","type":"related"},{"name":"thiamin oxidase activity","type":"exact"},{"name":"thiamin:oxygen 5-oxidoreductase activity","type":"related"},{"name":"thiamine dehydrogenase activity","type":"related"},{"name":"thiamine:oxygen 5-oxidoreductase activity","type":"related"}],"termid":"GO:0050423"}


id: GO:0030370
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a receptor for intercellular adhesion molecule-3 (ICAM-3), such as DC-SIGN and LFA-1.","definition_xrefs":["GOC:ceb","PMID:11473836"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"intercellular adhesion molecule-3 receptor binding","synonyms":[{"name":"ICAM-3 receptor binding","type":"exact"},{"name":"ICAM-3 receptor ligand","type":"narrow"},{"name":"intercellular adhesion molecule-3 receptor ligand","type":"narrow"}],"termid":"GO:0030370"}


id: PBO:0078260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable C","termid":"PBO:0078260"}


id: PBO:0073113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short chain dehydrogenase/reductase family 42E, member 1 pseudogene 1","termid":"PBO:0073113"}


id: PBO:0110353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DBF4B-CDC7 kinase regulatory subunit","termid":"PBO:0110353"}


id: GO:0039509
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of the functional activity of a host pattern recognition receptor. A pattern recognition receptor combines with a molecular pattern based on a repeating or polymeric structure, such as a polysaccharide or peptidoglycan, to initiate a change in cell activity.","definition_xrefs":["GOC:sp","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host pattern recognition receptor activity (obsolete GO:0039509)","synonyms":[{"name":"down regulation by virus of host pattern recognition receptor activity","type":"exact"},{"name":"down-regulation by virus of host pattern recognition receptor activity","type":"exact"},{"name":"inhibition by virus of host pattern recognition receptor activity","type":"narrow"},{"name":"negative regulation by virus of host pattern recognition receptor activity","type":"exact"},{"name":"suppression by virus of host pattern recognition receptor function","type":"exact"},{"name":"viral inhibition of host pattern recognition receptor activity","type":"narrow"}],"termid":"GO:0039509"}


id: MONDO:1012926
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alzheimer disease that occurs in white-tufted-ear marmoset due to a mutation in the APP gene created by genetic engineering or gene editing.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"Alzheimer disease, non-human animal","termid":"MONDO:1011443"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alzheimer disease, APP-related, white-tufted-ear marmoset","secondary_identifiers":["OMIA:002538-9483"],"termid":"MONDO:1012926","xrefs":{"Monarch":{"xref_id":"1012926"}}}


id: PBO:0030087
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-vacuolated","termid":"PBO:0030087"}


id: GO:1903441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a ciliary membrane.","definition_xrefs":["GO_REF:0000087","PMID:22139371","GOC:cilia","GOC:TermGenie","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cilium","termid":"GO:0061512"},{"relation_name":"is_a","term_name":"protein localization to membrane","termid":"GO:0072657"},{"relation_name":"is_a","term_name":"protein localization to cell periphery","termid":"GO:1990778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to ciliary membrane","synonyms":[{"name":"protein localisation in ciliary membrane","type":"exact"},{"name":"protein localisation to ciliary membrane","type":"exact"},{"name":"protein localization in ciliary membrane","type":"exact"}],"termid":"GO:1903441"}


id: PBO:0041110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BSND pseudogene 3","termid":"PBO:0041110"}


id: GO:0099029
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the presynaptic active zone membrane consisting of the gene products that are tethered to the membrane only by a covalently attached anchor, such as a lipid group that is embedded in the membrane. Gene products with peptide sequences that are embedded in the membrane are excluded from this grouping.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete anchored component of presynaptic active zone membrane (obsolete GO:0099029)","termid":"GO:0099029"}


id: GO:1905761
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a SCF ubiquitin ligase complex.","definition_xrefs":["PMID:19723762","GOC:dph","GOC:ha","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"SCF ubiquitin ligase complex binding","synonyms":[{"name":"CDL1 complex binding","type":"exact"},{"name":"CRL1 complex binding","type":"exact"},{"name":"Cul1-RING ubiquitin ligase complex binding","type":"exact"},{"name":"SCF complex binding","type":"exact"},{"name":"SCF complex substrate recognition subunit binding","type":"narrow"},{"name":"Skp1/Cul1/F-box protein complex binding","type":"exact"},{"name":"cullin-RING ligase 1 binding","type":"exact"}],"termid":"GO:1905761"}


id: GO:0048877
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any biological process involved in the maintenance of the steady-state number of cells within a population of cells in the retina.","definition_xrefs":["GOC:isa_complete","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retina homeostasis","termid":"GO:0001895"},{"relation_name":"is_a","term_name":"homeostasis of number of cells within a tissue","termid":"GO:0048873"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"homeostasis of number of retina cells","termid":"GO:0048877"}


id: PBO:0029756
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_modification","termid":"PBO:0029756"}


id: PBO:0054100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1456","termid":"PBO:0054100"}


id: PBO:0063409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDCL3 pseudogene 5","termid":"PBO:0063409"}


id: GO:0046325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the import of the hexose monosaccharide glucose into a cell or organelle.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of D-glucose transmembrane transport","termid":"GO:0010829"},{"relation_name":"is_a","term_name":"regulation of D-glucose import","termid":"GO:0046324"},{"relation_name":"negatively_regulates","term_name":"D-glucose import","termid":"GO:0046323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"negative regulation of D-glucose import","synonyms":[{"name":"down regulation of glucose import","type":"exact"},{"name":"down-regulation of glucose import","type":"exact"},{"name":"downregulation of glucose import","type":"exact"},{"name":"inhibition of glucose import","type":"narrow"},{"name":"negative regulation of glucose import","type":"exact"},{"name":"negative regulation of glucose uptake","type":"exact"}],"termid":"GO:0046325"}


id: MONDO:0018956
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Idiopathic bronchiectasis (IB) is a progressive lung disease characterized by chronic dilation of the bronchi and destruction of the bronchial walls in the absence of any underlying cause (such as post infectious disease, aspiration, immunodeficiency, congenital abnormalities and ciliary anomalies).","definition_xrefs":["Orphanet:60033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bronchiectasis","termid":"MONDO:0004822"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"idiopathic bronchiectasis","secondary_identifiers":["MEDGEN:573462","GARD:16664","UMLS:C0339985","SCTID:233629001"],"termid":"MONDO:0018956","xrefs":{"Monarch":{"xref_id":"0018956"}}}


id: PBO:0000827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"haloacid dehalogenase-like hydrolase","termid":"PBO:0000827"}


id: MONDO:0800376
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"DEND syndrome","termid":"MONDO:0019207"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005015"}],"interesting_parent_ids":["MONDO:0019254","MONDO:0005066","MONDO:0005015","MONDO:0037792","MONDO:0004335"],"is_obsolete":false,"name":"developmental delay, epilepsy, and neonatal diabetes 2","secondary_identifiers":["UMLS:C5394304","MEDGEN:1712655"],"synonyms":[{"name":"DEND2","type":"exact"}],"termid":"MONDO:0800376","xrefs":{"Monarch":{"xref_id":"0800376"}}}


id: FYPO:0001710
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of iron-sulfur cluster binding by a gene product (usually a protein) in a mutant is stabilized, i.e. interactions between the iron-sulfur cluster and the gene product last longer than in wild type under any given set of conditions. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal iron-sulfur cluster binding","termid":"FYPO:0001709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"stabilized iron-sulfur cluster binding","synonyms":[{"name":"increased duration of iron-sulfur cluster binding","type":"exact"},{"name":"stabilised iron-sulfur cluster binding","type":"exact"},{"name":"stabilized iron-sulphur cluster binding","type":"exact"}],"termid":"FYPO:0001710"}


id: MONDO:0012960
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant non-syndromic intellectual disability in which the cause of the disease is a mutation in the SYNGAP1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infantile epilepsy syndrome","termid":"MONDO:0020071"},{"relation_name":"is_a","term_name":"intellectual disability, autosomal dominant","termid":"MONDO:0100172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0000426"],"is_obsolete":false,"name":"intellectual disability, autosomal dominant 5","secondary_identifiers":["OMIM:612621","MESH:C567234","Orphanet:544254","UMLS:C2675473","GARD:12558","MEDGEN:382611","DOID:0070035"],"synonyms":[{"name":"MRD5","type":"exact"},{"name":"SYNGAP1 autosomal dominant non-syndromic intellectual disability","type":"exact"},{"name":"SYNGAP1 gene mutation linked to intellectual disability, schizophrenia and autism","type":"related"},{"name":"SYNGAP1 syndrome","type":"related"},{"name":"SYNGAP1-related NSID","type":"related"},{"name":"SYNGAP1-related developmental and epileptic encephalopathy","type":"exact"},{"name":"SYNGAP1-related non-syndromic intellectual disability","type":"related"},{"name":"autosomal dominant intellectual disability 5","type":"exact"},{"name":"autosomal dominant mental retardation 5","type":"exact"},{"name":"autosomal dominant non-syndromic intellectual disability 5","type":"related"},{"name":"autosomal dominant non-syndromic intellectual disability caused by mutation in SYNGAP1","type":"exact"},{"name":"epilepsy due to SYNGAP mutations","type":"exact"},{"name":"intellectual disability, autosomal dominant 5","type":"exact"},{"name":"intellectual disability, autosomal dominant type 5","type":"exact"},{"name":"mental retardation, autosomal dominant 5","type":"related"},{"name":"mental retardation, autosomal dominant type 5","type":"exact"}],"termid":"MONDO:0012960","xrefs":{"Monarch":{"xref_id":"0012960"}}}


id: MONDO:0015251
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete balantidiasis (obsolete MONDO:0015251)","termid":"MONDO:0015251","xrefs":{"Monarch":{"xref_id":"0015251"}}}


id: MONDO:0009357
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"humeroradial synostosis","termid":"MONDO:0007737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"humeroradial synostosis with craniofacial anomalies","secondary_identifiers":["MEDGEN:369834","MESH:C566888","OMIM:236410","UMLS:C1968717"],"synonyms":[{"name":"humeroradial synostosis with craniofacial anomalies","type":"exact"}],"termid":"MONDO:0009357","xrefs":{"Monarch":{"xref_id":"0009357"}}}


id: GO:1900115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any regulation of signal transduction that takes place in the extracellular region.","definition_xrefs":["GOC:TermGenie","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"extracellular regulation of signal transduction","synonyms":[{"name":"regulation of signaling pathway in extracellular region","type":"exact"},{"name":"regulation of signalling pathway in extracellular region","type":"exact"}],"termid":"GO:1900115"}


id: PBO:0054411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1807","termid":"PBO:0054411"}


id: MOD:01411
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-leucine residue to a monohydroxylated leucine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monohydroxylated residue","termid":"MOD:00425"},{"relation_name":"is_a","term_name":"hydroxylated leucine","termid":"MOD:01410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monohydroxylated leucine","synonyms":[{"name":"Hy1Leu","type":"exact"}],"termid":"MOD:01411"}


id: GO:0051593
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a folic acid stimulus.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to vitamin","termid":"GO:0033273"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to folic acid","synonyms":[{"name":"cellular response to folate","type":"exact"},{"name":"cellular response to vitamin B9","type":"exact"}],"termid":"GO:0051593"}


id: PBO:0068357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 138 pseudogene 2","termid":"PBO:0068357"}


id: PATO:0002077
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being positioned with multiple entities of the same type above and below.","definition_xrefs":["PATOC:CJM"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stacked","termid":"PATO:0002077"}


id: GO:0047298
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-3-amino-2-methylpropanoate + 2-oxoglutarate = 2-methyl-3-oxopropanoate + L-glutamate.","definition_xrefs":["EC:2.6.1.22","RHEA:13993"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016769","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"(S)-3-amino-2-methylpropionate transaminase activity","secondary_identifiers":["KEGG_REACTION:R04188","MetaCyc:2.6.1.22-RXN"],"synonyms":[{"name":"(S)-3-amino-2-methylpropanoate:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"(S)-3-amino-2-methylpropionate aminotransferase activity","type":"exact"},{"name":"L-3-aminoisobutyrate aminotransferase activity","type":"related"},{"name":"L-3-aminoisobutyrate transaminase activity","type":"related"},{"name":"L-3-aminoisobutyric aminotransferase activity","type":"related"},{"name":"L-AIBAT activity","type":"related"},{"name":"beta-aminobutyric transaminase activity","type":"related"},{"name":"beta-aminoisobutyrate-alpha-ketoglutarate transaminase activity","type":"related"}],"termid":"GO:0047298"}


id: MONDO:0015000
data:
  {"annotated_genes":["SJAG_02453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88823],"is_not":false,"summary":null,"term":"MONDO:0015000"}]},"cv_name":"mondo","definition":"Any early infantile epileptic encephalopathy in which the cause of the disease is a mutation in the AP3B2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genetic developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 48","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080448","OMIM:617276","UMLS:C4310637","MEDGEN:934604","GARD:16218"],"synonyms":[{"name":"AP3B2 early infantile epileptic encephalopathy","type":"exact"},{"name":"DEE48","type":"exact"},{"name":"EIEE48","type":"exact"},{"name":"developmental and epileptic encephalopathy 48","type":"exact"},{"name":"early infantile epileptic encephalopathy caused by mutation in AP3B2","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 48","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 48; EIEE48","type":"exact"},{"name":"epileptic encephalopathy, early infantile, type 48","type":"exact"}],"termid":"MONDO:0015000","terms_by_termid":{"MONDO:0015000":null},"xrefs":{"Monarch":{"xref_id":"0015000"}}}


id: PBO:0002317
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"previusly annotated as dubious","termid":"PBO:0002317"}


id: PR:P33277
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gap1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P33277"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC646.12c","synonyms":[{"name":"Spom972h-gap1","type":"exact"},{"name":"ras GTPase-activating protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P33277"}


id: GO:1905602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of receptor-mediated endocytosis involved in cholesterol transport.","definition_xrefs":["GOC:BHF","GOC:TermGenie","GO_REF:0000058","GOC:nc","PMID:22848640"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intracellular cholesterol transport","termid":"GO:0032385"},{"relation_name":"is_a","term_name":"positive regulation of receptor-mediated endocytosis","termid":"GO:0048260"},{"relation_name":"is_a","term_name":"regulation of receptor-mediated endocytosis involved in cholesterol transport","termid":"GO:1905600"},{"relation_name":"positively_regulates","term_name":"receptor-mediated endocytosis involved in cholesterol transport","termid":"GO:0090118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"positive regulation of receptor-mediated endocytosis involved in cholesterol transport","synonyms":[{"name":"activation of receptor-mediated endocytosis involved in cholesterol transport","type":"narrow"},{"name":"activation of receptor-mediated endocytosis involved in intracellular cholesterol transport","type":"related"},{"name":"activation of receptor-mediated endocytosis of LDL","type":"narrow"},{"name":"activation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"activation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport","type":"related"},{"name":"positive regulation of receptor-mediated endocytosis involved in intracellular cholesterol transport","type":"related"},{"name":"positive regulation of receptor-mediated endocytosis of LDL","type":"related"},{"name":"positive regulation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"positive regulation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport","type":"related"},{"name":"up regulation of receptor-mediated endocytosis involved in cholesterol transport","type":"exact"},{"name":"up regulation of receptor-mediated endocytosis involved in intracellular cholesterol transport","type":"related"},{"name":"up regulation of receptor-mediated endocytosis of LDL","type":"related"},{"name":"up regulation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"up regulation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport","type":"related"},{"name":"up-regulation of receptor-mediated endocytosis involved in cholesterol transport","type":"exact"},{"name":"up-regulation of receptor-mediated endocytosis involved in intracellular cholesterol transport","type":"related"},{"name":"up-regulation of receptor-mediated endocytosis of LDL","type":"related"},{"name":"up-regulation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"up-regulation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport","type":"related"},{"name":"upregulation of receptor-mediated endocytosis involved in cholesterol transport","type":"exact"},{"name":"upregulation of receptor-mediated endocytosis involved in intracellular cholesterol transport","type":"related"},{"name":"upregulation of receptor-mediated endocytosis of LDL","type":"related"},{"name":"upregulation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"upregulation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport","type":"related"}],"termid":"GO:1905602"}


id: GO:0000447
data:
  {"annotated_genes":["SJAG_00965","SJAG_03952","SJAG_04916","SJAG_02644","SJAG_00897","SJAG_01551","SJAG_03425","SJAG_02861","SJAG_04188","SJAG_03234","SJAG_03796","SJAG_04524","SJAG_04582","SJAG_01623","SJAG_00772","SJAG_02553","SJAG_00955","SJAG_02547","SJAG_06613","SJAG_04174","SJAG_02250"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[60879,72095,72962,73649,74656,76268,80041,96523,98314,98603,104950,106384,106601,107485,107486,110847,115348,116063,117167,117255,120474],"is_not":false,"summary":null,"term":"GO:0000447"}]},"cv_name":"biological_process","definition":"Endonucleolytic cleavage between the SSU-rRNA and the 5.8S rRNA of an rRNA molecule originally produced as a tricistronic rRNA transcript that contained the Small SubUnit (SSU) rRNA, the 5.8S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript.","definition_xrefs":["PMID:10690410","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000479"},{"relation_name":"part_of","term_name":"maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000462"},{"relation_name":"part_of","term_name":"maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000466"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00772":null,"SJAG_00897":null,"SJAG_00955":null,"SJAG_00965":null,"SJAG_01551":null,"SJAG_01623":null,"SJAG_02250":null,"SJAG_02547":null,"SJAG_02553":null,"SJAG_02644":null,"SJAG_02861":null,"SJAG_03234":null,"SJAG_03425":null,"SJAG_03796":null,"SJAG_03952":null,"SJAG_04174":null,"SJAG_04188":null,"SJAG_04524":null,"SJAG_04582":null,"SJAG_04916":null,"SJAG_06613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0044085","GO:0042254"],"is_obsolete":false,"name":"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"endonucleolytic cleavage at A2","type":"narrow"}],"termid":"GO:0000447","terms_by_termid":{"GO:0000447":null}}


id: GO:0032648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interferon-beta production.","definition_xrefs":["GOC:mah","PMID:15546383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of type I interferon production","termid":"GO:0032479"},{"relation_name":"regulates","term_name":"interferon-beta production","termid":"GO:0032608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of interferon-beta production","secondary_identifiers":["GO:0035547","GO:0045357"],"synonyms":[{"name":"regulation of IFN-beta production","type":"exact"},{"name":"regulation of interferon-beta biosynthetic process","type":"narrow"},{"name":"regulation of interferon-beta secretion","type":"narrow"}],"termid":"GO:0032648"}


id: PBO:0089110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human NEDD4 family-interacting protein ortholog","termid":"PBO:0089110"}


id: FYPO:0000407
data:
  {"alleles_by_uniquename":{"SJAG_00871:allele-1":{"allele_type":"amino_acid_mutation","description":"cut3-T19E","gene_uniquename":"SJAG_00871","name":"cut3-T19E","uniquename":"SJAG_00871:allele-1"},"SJAG_04284:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04284","name":"nup61delta","uniquename":"SJAG_04284:allele-1"},"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[121230],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000619"}],"single_locus_phenotype":[{"annotations":[121231],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000619"},{"annotations":[121225],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003738"},{"annotations":[121324],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007701"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cell cycle progression is arrested under conditions where arrest does not normally occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle arrest phenotype","termid":"FYPO:0001024"},{"relation_name":"is_a","term_name":"abnormal cell cycle process","termid":"FYPO:0002734"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00871":null,"SJAG_04284":null,"SJAG_04332":null,"SJAG_04464":null},"genotype_count":4,"genotypes_by_uniquename":{"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]},"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut3-T19E(aa) pim1-R152C(aa)","display_uniquename":"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00871:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]},"nup61delta":{"display_name":"nup61delta","display_uniquename":"nup61delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04284:allele-1","expression":"Null"}]}]},"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pim1-R152C(aa)","display_uniquename":"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_04464","SJAG_00871"],"name":"abnormally arrested cell cycle progression","references_by_uniquename":{"PMID:25866389":null,"PMID:28954740":null},"single_locus_annotated_genes":["SJAG_04464","SJAG_04284","SJAG_04332"],"single_locus_genotype_uniquenames":["cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","nup61delta","pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal cell cycle arrest","type":"exact"},{"name":"abnormally arrested cell cycle progression during mitotic cell cycle","type":"related"},{"name":"abnormally arrested cell cycle progression during vegetative growth","type":"exact"},{"name":"cell cycle progression: arrested","type":"related"}],"termid":"FYPO:0000407","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000619":null,"FYPO:0003738":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null}}


id: GO:0034069
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + aminoglycoside = CoA + N-acetylaminoglycoside.","definition_xrefs":["GOC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetyltransferase activity","termid":"GO:0008080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"aminoglycoside N-acetyltransferase activity","synonyms":[{"name":"kanamycin acetyltransferase activity","type":"narrow"}],"termid":"GO:0034069"}


id: GO:1902677
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any ciliary basal body that is part of a left caudal flagellum found in Giardia species (trophozoite stage).","definition_xrefs":["PMID:16607022","ISBN:9780124260207","PMID:5961344","GO_REF:0000064","GOC:TermGenie","GOC:giardia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ciliary basal body","termid":"GO:0036064"},{"relation_name":"part_of","term_name":"left caudal flagellum","termid":"GO:0097560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0015630","GO:0005575"],"is_obsolete":false,"name":"left caudal basal body","synonyms":[{"name":"cilial basal body of left caudal cilium","type":"exact"},{"name":"cilial basal body of left caudal flagellum","type":"exact"},{"name":"ciliary basal body of left caudal cilium","type":"exact"},{"name":"ciliary basal body of left caudal flagellum","type":"exact"},{"name":"cilium basal body of left caudal cilium","type":"exact"},{"name":"cilium basal body of left caudal flagellum","type":"exact"},{"name":"left caudal flagellum ciliary basal body","type":"exact"},{"name":"microtubule basal body of left caudal cilium","type":"exact"},{"name":"microtubule basal body of left caudal flagellum","type":"exact"}],"termid":"GO:1902677"}


id: GO:0051684
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which the Golgi is maintained in a specific location within a cell and prevented from moving elsewhere.","definition_xrefs":["GOC:dph","GOC:ai","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi localization","termid":"GO:0051645"},{"relation_name":"is_a","term_name":"maintenance of organelle location","termid":"GO:0051657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"maintenance of Golgi location","synonyms":[{"name":"maintenance of Golgi apparatus localization","type":"exact"},{"name":"maintenance of Golgi body localization","type":"exact"},{"name":"maintenance of Golgi localization","type":"related"}],"termid":"GO:0051684"}


id: FYPO:0007461
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to histidine. Cells stop growing (and may die) at a concentration of histidine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002683","FYPO:0000003","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to histidine","synonyms":[{"name":"hypersensitive to histidine","type":"exact"},{"name":"sensitive to histidine during mitotic cell cycle","type":"related"},{"name":"sensitive to histidine during vegetative growth","type":"exact"}],"termid":"FYPO:0007461"}


id: PBO:0090164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription repressor Scr1","termid":"PBO:0090164"}


id: MOD:00995
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-phenylalanine residue to (81)Br-L-2'-bromophenylalanine.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-2'-bromophenylalanine","termid":"MOD:00183"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(81)Br labeled 2'-bromophenylalanine","termid":"MOD:00995"}


id: PBO:0073593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SHOC2 leucine rich repeat scaffold protein","termid":"PBO:0073593"}


id: PBO:0042355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD99 molecule (Xg blood group)","termid":"PBO:0042355"}


id: GO:1903891
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the ATF6-mediated unfolded protein response.","definition_xrefs":["GO_REF:0000058","GOC:PARL","GOC:TermGenie","GOC:bf","PMID:22013210"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endoplasmic reticulum unfolded protein response","termid":"GO:1900101"},{"relation_name":"regulates","term_name":"ATF6-mediated unfolded protein response","termid":"GO:0036500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of ATF6-mediated unfolded protein response","synonyms":[{"name":"regulation of ATF6 branch of UPR","type":"exact"},{"name":"regulation of ATF6 signal transduction pathway","type":"broad"},{"name":"regulation of ATF6 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"regulation of ATF6-alpha UPR branch","type":"narrow"},{"name":"regulation of ATF6-beta UPR branch","type":"narrow"},{"name":"regulation of UPR signaling by ATF6 stress sensor","type":"exact"},{"name":"regulation of activating transcription factor 6 signaling in unfolded protein response","type":"exact"},{"name":"regulation of endoplasmic reticulum unfolded protein response; ATF6 signaling","type":"exact"}],"termid":"GO:1903891"}


id: PBO:0090830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane TRP-like calcium ion channel Pkd2","termid":"PBO:0090830"}


id: PBO:0057783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3059","termid":"PBO:0057783"}


id: MONDO:0022872
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"corpus callosum dysgenesis X-linked recessive","termid":"MONDO:0022872","xrefs":{"Monarch":{"xref_id":"0022872"}}}


id: GO:0035245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The addition of a methyl group onto a carbon atom of an arginine residue in a protein.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-arginine C-methylation (obsolete GO:0035245)","termid":"GO:0035245"}


id: PBO:0084527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the FLO family of cell wall flocculation proteins; not expressed in most lab strains; overproduction induces flocculation that can be inhibited by mannose, sucrose, or glucose; overproduction also promotes haploid invasive growth and diploid filamentous growth","termid":"PBO:0084527"}


id: MONDO:0958035
data:
  {"annotated_genes":["SJAG_00377"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87899],"is_not":false,"summary":null,"term":"MONDO:0958035"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited primary ovarian failure","termid":"MONDO:0019852"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00377":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"premature ovarian failure 23","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1845723","UMLS:C5882747","OMIM:620686"],"termid":"MONDO:0958035","terms_by_termid":{"MONDO:0958035":null},"xrefs":{"Monarch":{"xref_id":"0958035"}}}


id: PBO:0045192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJB6 pseudogene 5","termid":"PBO:0045192"}


id: PBO:0048469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glial cells missing transcription factor 2","termid":"PBO:0048469"}


id: PBO:0044699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 3 pseudogene 2","termid":"PBO:0044699"}


id: PBO:0077762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOMM20 pseudogene 4","termid":"PBO:0077762"}


id: GO:0001562
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a protozoan.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to other organism","termid":"GO:0051707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to protozoan","secondary_identifiers":["GO:0042833"],"synonyms":[{"name":"resistance to pathogenic protozoa","type":"related"},{"name":"response to protozoa","type":"exact"},{"name":"response to protozoon","type":"exact"}],"termid":"GO:0001562"}


id: GO:1903620
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of transdifferentiation.","definition_xrefs":["PMID:22118091","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of transdifferentiation","termid":"GO:1903618"},{"relation_name":"positively_regulates","term_name":"transdifferentiation","termid":"GO:0060290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of transdifferentiation","synonyms":[{"name":"activation of transdifferentiation","type":"narrow"},{"name":"up regulation of transdifferentiation","type":"exact"},{"name":"up-regulation of transdifferentiation","type":"exact"},{"name":"upregulation of transdifferentiation","type":"exact"}],"termid":"GO:1903620"}


id: PBO:0064004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 38","termid":"PBO:0064004"}


id: FYPO:0006025
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of a protein to one or more actin filaments does not occur. The affected protein may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein-protein interaction","termid":"FYPO:0000705"},{"relation_name":"is_a","term_name":"abnormal protein complex binding","termid":"FYPO:0003591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000702","FYPO:0000707"],"is_obsolete":false,"name":"abolished actin filament binding","synonyms":[{"name":"abolished F-actin binding","type":"exact"},{"name":"abolished filamentous actin binding","type":"exact"},{"name":"actin filament binding abolished","type":"exact"}],"termid":"FYPO:0006025"}


id: PBO:0011410
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-axis_of","termid":"PBO:0011410"}


id: MONDO:0013934
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic combined T and B cell immunodeficiency characterized by T- and B-cell lymphopenia, hypergammaglobulinemia and intermittent neutropenia. It presents with recurrent opportunistic viral, bacterial and fungal infections involving skin (cutaneous papillomatosis, molluscum contagiosum, skin abscesses, mucocutaneous candidiasis), upper and lower respiratory tract or septicemia. Other clinical features include autoimmune manifestations (autoimmune hemolytic anemia) and congenital heart defects (atrial septal defects, patent foramen ovale, mitral, triscupid and pulmonary valve insufficiency).","definition_xrefs":["Orphanet:314689"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"non-SCID combined immunodeficiency","termid":"MONDO:0018814"},{"relation_name":"is_a","term_name":"combined immunodeficiency","termid":"MONDO:0015131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"combined immunodeficiency due to STK4 deficiency","secondary_identifiers":["OMIM:614868","GARD:17430","MEDGEN:766857","UMLS:C3553943"],"synonyms":[{"name":"CID due to STK4 deficiency","type":"exact"},{"name":"MST1 deficiency","type":"exact"},{"name":"STK4 deficiency","type":"exact"},{"name":"T-cell immunodeficiency, recurrent infections, and autoimmunity with or without CARDIAC malformations","type":"related"},{"name":"T-cell immunodeficiency, recurrent infections, autoimmunity, and cardiac malformations","type":"exact"},{"name":"TIIAC","type":"exact"}],"termid":"MONDO:0013934","xrefs":{"Monarch":{"xref_id":"0013934"}}}


id: PBO:0075301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor of cytokine signaling 2","termid":"PBO:0075301"}


id: MONDO:0019765
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete celosomia (obsolete MONDO:0019765)","secondary_identifiers":["ICD9:759.89","SCTID:44518003","Orphanet:93942"],"termid":"MONDO:0019765","xrefs":{"Monarch":{"xref_id":"0019765"}}}


id: MONDO:0014933
data:
  {"annotated_genes":["SJAG_02084"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88967],"is_not":false,"summary":null,"term":"MONDO:0014933"}]},"cv_name":"mondo","definition":"Any early infantile epileptic encephalopathy in which the cause of the disease is a mutation in the UBA5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"undetermined early-onset epileptic encephalopathy","termid":"MONDO:0018614"},{"relation_name":"is_a","term_name":"neonatal-onset developmental and epileptic encephalopathy","termid":"MONDO:0100455"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02084":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005027","MONDO:0004736","MONDO:0700092"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 44","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4310700","DOID:0080424","OMIM:617132","MEDGEN:934667","GARD:16198"],"synonyms":[{"name":"DEE44","type":"exact"},{"name":"EIEE44","type":"exact"},{"name":"UBA5 early infantile epileptic encephalopathy","type":"exact"},{"name":"developmental and epileptic encephalopathy 44","type":"exact"},{"name":"early infantile epileptic encephalopathy caused by mutation in UBA5","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 44","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 44; EIEE44","type":"exact"},{"name":"epileptic encephalopathy, early infantile, type 44","type":"exact"}],"termid":"MONDO:0014933","terms_by_termid":{"MONDO:0014933":null},"xrefs":{"Monarch":{"xref_id":"0014933"}}}


id: MONDO:0012340
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"celiac disease","termid":"MONDO:0005130"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"celiac disease, susceptibility to, 2","secondary_identifiers":["MEDGEN:347564","OMIM:609754","UMLS:C1857846"],"synonyms":[{"name":"CELIAC2","type":"exact"},{"name":"celiac disease, susceptibility to, 2","type":"exact"},{"name":"gluten-sensitive enteropathy, susceptibility to, 2","type":"related"}],"termid":"MONDO:0012340","xrefs":{"Monarch":{"xref_id":"0012340"}}}


id: PBO:0070231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 169 pseudogene","termid":"PBO:0070231"}


id: PBO:0054447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1844","termid":"PBO:0054447"}


id: PATO:0001935
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being roundish, a little inclining to be oblong.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"circular","termid":"PATO:0000411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obtuse","synonyms":[{"name":"roundish","type":"exact"}],"termid":"PATO:0001935"}


id: PBO:0114535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PX/PXA domain protein, implicated in membrane organization or lipid metabolism","termid":"PBO:0114535"}


id: PBO:0120293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NSE1 component of SMC5/6 complex","termid":"PBO:0120293"}


id: GO:0004044
data:
  {"annotated_genes":["SJAG_01661"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74169],"is_not":false,"summary":null,"term":"GO:0004044"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-phospho-beta-D-ribosylamine + L-glutamate + diphosphate = 5-phospho-alpha-D-ribose 1-diphosphate + L-glutamine + H2O.","definition_xrefs":["RHEA:14905","EC:2.4.2.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01661":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"amidophosphoribosyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-73815","KEGG_REACTION:R01072","MetaCyc:PRPPAMIDOTRANS-RXN"],"synonyms":[{"name":"5'-phosphoribosylpyrophosphate amidotransferase activity","type":"related"},{"name":"5-phosphoribosyl-1-pyrophosphate amidotransferase activity","type":"related"},{"name":"5-phosphoribosylamine:diphosphate phospho-alpha-D-ribosyltransferase (glutamate-amidating)","type":"related"},{"name":"5-phosphororibosyl-1-pyrophosphate amidotransferase activity","type":"related"},{"name":"alpha-5-phosphoribosyl-1-pyrophosphate amidotransferase activity","type":"related"},{"name":"glutamine 5-phosphoribosylpyrophosphate amidotransferase activity","type":"related"},{"name":"glutamine phosphoribosyldiphosphate amidotransferase activity","type":"related"},{"name":"glutamine phosphoribosylpyrophosphate amidotransferase activity","type":"related"},{"name":"glutamine ribosylpyrophosphate 5-phosphate amidotransferase activity","type":"related"},{"name":"phosphoribose pyrophosphate amidotransferase activity","type":"related"},{"name":"phosphoribosyl pyrophosphate amidotransferase activity","type":"related"},{"name":"phosphoribosyldiphosphate 5-amidotransferase activity","type":"related"},{"name":"phosphoribosylpyrophosphate glutamyl amidotransferase activity","type":"related"}],"termid":"GO:0004044","terms_by_termid":{"GO:0004044":null}}


id: PBO:0004287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MBF transcription factor complex subunit Rep1","termid":"PBO:0004287"}


id: PBO:0027107
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_nucleus,_with_protein_mislocalized_to_cytoplasmic_foci","termid":"PBO:0027107"}


id: GO:0035406
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histones by addition of a phosphate group to a tyrosine residue.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete histone-tyrosine phosphorylation (obsolete GO:0035406)","synonyms":[{"name":"histone tyrosine phosphorylation","type":"exact"}],"termid":"GO:0035406"}


id: PBO:0069265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 521, pseudogene","termid":"PBO:0069265"}


id: MONDO:0859317
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"pseudohypoaldosteronism type 1","termid":"MONDO:0019161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005240"],"is_obsolete":false,"name":"pseudohypoaldosteronism, type IB2, autosomal recessive","secondary_identifiers":["OMIM:620125","MEDGEN:1824028","UMLS:C5774255"],"termid":"MONDO:0859317","xrefs":{"Monarch":{"xref_id":"0859317"}}}


id: MONDO:0010394
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete leukoencephalopathy-metaphyseal chondrodysplasia syndrome (obsolete MONDO:0010394)","secondary_identifiers":["OMIM:300660"],"termid":"MONDO:0010394","xrefs":{"Monarch":{"xref_id":"0010394"}}}


id: GO:1903477
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any actin filament bundle assembly that is involved in mitotic actomyosin contractile ring assembly.","definition_xrefs":["GOC:vw","GOC:mtg_cell_cycle","GOC:TermGenie","GO_REF:0000060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actomyosin contractile ring actin filament bundle assembly","termid":"GO:0071519"},{"relation_name":"is_a","term_name":"mitotic actomyosin contractile ring assembly actin filament organization","termid":"GO:1903479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0000281"}],"interesting_parent_ids":["GO:0030036","GO:0007010","GO:0008150","GO:0007049","GO:0044085","GO:0000281"],"is_obsolete":false,"name":"mitotic contractile ring actin filament bundle assembly","synonyms":[{"name":"actin filament bundle assembly involved in mitotic actomyosin contractile ring assembly","type":"exact"}],"termid":"GO:1903477"}


id: MONDO:0020482
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Myotonia permanens is a very rare, persistent and more severe form of potassium-aggravated myotonia (PAM).","definition_xrefs":["Orphanet:99735"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium-aggravated myotonia","termid":"MONDO:0018959"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotonia permanens","secondary_identifiers":["icd11.foundation:2133644550","MEDGEN:1845910","UMLS:C5848361","GARD:16905","SCTID:715789009"],"termid":"MONDO:0020482","xrefs":{"Monarch":{"xref_id":"0020482"}}}


id: PBO:0015265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosidase II beta subunit","termid":"PBO:0015265"}


id: GO:2000514
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of CD4-positive, alpha-beta T cell activation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of alpha-beta T cell activation","termid":"GO:0046634"},{"relation_name":"regulates","term_name":"CD4-positive, alpha-beta T cell activation","termid":"GO:0035710"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of CD4-positive, alpha-beta T cell activation","termid":"GO:2000514"}


id: PBO:0068004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 306","termid":"PBO:0068004"}


id: PBO:0002334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ureidoglycolate hydrolase (predicted)","termid":"PBO:0002334"}


id: GO:1900666
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of emodin biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"regulation of emodin biosynthetic process","termid":"GO:1900664"},{"relation_name":"positively_regulates","term_name":"emodin biosynthetic process","termid":"GO:1900575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"positive regulation of emodin biosynthetic process","synonyms":[{"name":"activation of emodin anabolism","type":"exact"},{"name":"activation of emodin biosynthesis","type":"exact"},{"name":"activation of emodin biosynthetic process","type":"narrow"},{"name":"activation of emodin formation","type":"exact"},{"name":"activation of emodin synthesis","type":"exact"},{"name":"positive regulation of emodin anabolism","type":"exact"},{"name":"positive regulation of emodin biosynthesis","type":"exact"},{"name":"positive regulation of emodin formation","type":"exact"},{"name":"positive regulation of emodin synthesis","type":"exact"},{"name":"up regulation of emodin anabolism","type":"exact"},{"name":"up regulation of emodin biosynthesis","type":"exact"},{"name":"up regulation of emodin biosynthetic process","type":"exact"},{"name":"up regulation of emodin formation","type":"exact"},{"name":"up regulation of emodin synthesis","type":"exact"},{"name":"up-regulation of emodin anabolism","type":"exact"},{"name":"up-regulation of emodin biosynthesis","type":"exact"},{"name":"up-regulation of emodin biosynthetic process","type":"exact"},{"name":"up-regulation of emodin formation","type":"exact"},{"name":"up-regulation of emodin synthesis","type":"exact"},{"name":"upregulation of emodin anabolism","type":"exact"},{"name":"upregulation of emodin biosynthesis","type":"exact"},{"name":"upregulation of emodin biosynthetic process","type":"exact"},{"name":"upregulation of emodin formation","type":"exact"},{"name":"upregulation of emodin synthesis","type":"exact"}],"termid":"GO:1900666"}


id: SO:0000230
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding valyl tRNA (SO:000273).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_primary_transcript","termid":"SO:0000210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"valine_tRNA_primary_transcript","synonyms":[{"name":"valine tRNA primary transcript","type":"exact"}],"termid":"SO:0000230"}


id: GO:0002590
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of antigen processing and presentation of peptide antigen via MHC class I.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antigen processing and presentation of peptide antigen","termid":"GO:0002584"},{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of peptide antigen via MHC class I","termid":"GO:0002589"},{"relation_name":"negatively_regulates","term_name":"antigen processing and presentation of peptide antigen via MHC class I","termid":"GO:0002474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of antigen processing and presentation of peptide antigen via MHC class I","synonyms":[{"name":"down regulation of antigen processing and presentation of peptide antigen via MHC class I","type":"exact"},{"name":"down-regulation of antigen processing and presentation of peptide antigen via MHC class I","type":"exact"},{"name":"downregulation of antigen processing and presentation of peptide antigen via MHC class I","type":"exact"},{"name":"inhibition of antigen processing and presentation of peptide antigen via MHC class I","type":"narrow"},{"name":"negative regulation of peptide antigen processing and presentation via MHC class I","type":"exact"}],"termid":"GO:0002590"}


id: PBO:0000312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Proline","termid":"PBO:0000312"}


id: MOD:00077
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to asymmetric dimethylarginine, N(omega),N(omega)-dimethyl-L-arginine.","definition_xrefs":["PubMed:14570711","PubMed:11152131","PubMed:3032834","RESID:AA0068","PubMed:12964758","ChEBI:17929","Unimod:36#R","PubMed:15835918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methylated residue","termid":"MOD:00602"},{"relation_name":"is_a","term_name":"dimethylated L-arginine","termid":"MOD:00783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"asymmetric dimethyl-L-arginine","synonyms":[{"name":"(2S)-2-amino-5-([(dimethylamino)(imino)methyl]amino)pentanoic acid","type":"exact"},{"name":"Dimethyl","type":"related"},{"name":"MOD_RES Asymmetric dimethylarginine","type":"exact"},{"name":"MOD_RES Omega-N-methylated arginine","type":"exact"},{"name":"N5-[(dimethylamino)(imino)methyl]ornithine","type":"exact"},{"name":"NG,NG-dimethylarginine","type":"exact"},{"name":"NoNoMe2Arg","type":"exact"},{"name":"asymmetric dimethylarginine","type":"exact"},{"name":"di-Methylation","type":"related"},{"name":"omega-N,omega-N-dimethlyated L-arginine","type":"exact"},{"name":"omega-N,omega-N-dimethyl-L-arginine","type":"exact"}],"termid":"MOD:00077"}


id: PBO:0073960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 22 member 9","termid":"PBO:0073960"}


id: GO:0008867
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: galactarate = 5-dehydro-4-deoxy-D-glucarate + H2O.","definition_xrefs":["EC:4.2.1.42","RHEA:16005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"galactarate dehydratase activity","secondary_identifiers":["MetaCyc:GALACTARDEHYDRA-RXN","KEGG_REACTION:R05608"],"synonyms":[{"name":"D-galactarate hydro-lyase (5-dehydro-4-deoxy-D-glucarate-forming)","type":"related"},{"name":"D-galactarate hydro-lyase activity","type":"related"}],"termid":"GO:0008867"}


id: MONDO:0012256
data:
  {"annotated_genes":["SJAG_04506","SJAG_04292","SJAG_00199"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86962,86963,86964],"is_not":false,"summary":null,"term":"MONDO:0012256"}]},"cv_name":"mondo","definition":"Autosomal recessive spastic paraplegia type 28 is a pure form of hereditary spastic paraplegia characterized by a childhood or adolescent onset of slowly progressive, pure crural muscle spastic paraparesis which manifests with mild lower limb weakness, gait difficulties, extensor plantar responses, and hyperreflexia of lower extremities. Less common manifestations reported include cerebellar oculomotor disturbance with saccadic eye pursuit, pes cavus and scoliosis. Some patients also present pin and vibration sensory loss in distal legs.","definition_xrefs":["Orphanet:101008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pure hereditary spastic paraplegia","termid":"MONDO:0015149"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00199":null,"SJAG_04292":null,"SJAG_04506":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 28","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1836295","DOID:0110779","OMIM:609340","SCTID:763376002","MEDGEN:332174","GARD:16941","MESH:C563732"],"synonyms":[{"name":"DDHD1 autosomal recessive pure spastic paraplegia","type":"exact"},{"name":"SPG28","type":"exact"},{"name":"autosomal recessive pure spastic paraplegia caused by mutation in DDHD1","type":"exact"},{"name":"autosomal recessive spastic paraplegia 28","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 28","type":"exact"},{"name":"hereditary spastic paraplegia 28","type":"exact"},{"name":"hereditary spastic paraplegia type 28","type":"exact"},{"name":"spastic paraplegia 28, autosomal recessive","type":"related"}],"termid":"MONDO:0012256","terms_by_termid":{"MONDO:0012256":null},"xrefs":{"Monarch":{"xref_id":"0012256"}}}


id: RO:0002330
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"holds between two entities when some genome-level process such as gene expression is involved. This includes transcriptional, spliceosomal events. These relations can be used between either macromolecule entities (such as regions of nucleic acid) or between their abstract informational counterparts.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genomically_related_to","termid":"RO:0002330"}


id: PBO:0053910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1204","termid":"PBO:0053910"}


id: FYPO:0005924
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of the histone variant H2A.Z found associated with chromatin in centromere inner repeat regions is higher than normal when the cell is in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah","PMID:21437270"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level in chromatin","termid":"FYPO:0005893"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased H2A.Z level at centromere inner repeat","synonyms":[{"name":"H2A.Z accumulation at centromere inner repeat","type":"exact"},{"name":"increased H2A.Z level at centromere imr during vegetative growth","type":"exact"},{"name":"increased H2A.Z level at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"increased H2A.Z level at centromere inner repeat region during vegetative growth","type":"exact"},{"name":"increased H2A.Z level in chromatin at centromere inner repeat","type":"exact"}],"termid":"FYPO:0005924"}


id: PBO:0027852
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_DNA_resection_during_replication_fork_processing","termid":"PBO:0027852"}


id: GO:1902408
data:
  {"annotated_genes":["SJAG_00256","SJAG_01215","SJAG_01787","SJAG_02838","SJAG_02392","SJAG_00845","SJAG_03309","SJAG_01889","SJAG_03596","SJAG_00807","SJAG_02380"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90087,98144,110699,121336],"is_not":false,"summary":null,"term":"GO:1902408"},{"annotations":[121335],"is_not":true,"summary":null,"term":"GO:1902408"},{"annotations":[92582,121337,112618,105522],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903617"},{"annotations":[113231,103213,89668],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902472"}]},"cv_name":"biological_process","definition":"The process in which a contractile ring is positioned in a specific location during the mitotic cell cycle. This process is critical for both for both symmetric and asymmetric cell divisions.","definition_xrefs":["PMID:28162898","PMID:26553932"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokinesis, division site positioning","termid":"GO:0007105"},{"relation_name":"is_a","term_name":"mitotic cytokinetic process","termid":"GO:1902410"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00256":null,"SJAG_00807":null,"SJAG_00845":null,"SJAG_01143":null,"SJAG_01215":null,"SJAG_01787":null,"SJAG_01889":null,"SJAG_02380":null,"SJAG_02392":null,"SJAG_02838":null,"SJAG_03309":null,"SJAG_03596":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000281"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0000281","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"mitotic cytokinesis, division site positioning","references_by_uniquename":{"GO_REF:0000107":null,"PMID:25866389":null},"synonyms":[{"name":"mitotic cytokinesis, site selection","type":"exact"}],"termid":"GO:1902408","terms_by_termid":{"GO:1902408":null,"GO:1902472":null,"GO:1903617":null}}


id: PBO:0058846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8075","termid":"PBO:0058846"}


id: MOD:01855
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively adds two oxygen atoms to a sulfur atom of a residue without removing hydrogen atoms.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur oxygenated residue","termid":"MOD:00680"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfur dioxygenated residue","termid":"MOD:01855"}


id: PR:Q10295
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A poly(A) polymerase beta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02640"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) polymerase pla1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC646.04","secondary_identifiers":["UniProtKB:Q10295"],"synonyms":[{"name":"PAP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PAPOLB","type":"exact"},{"name":"polynucleotide adenylyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10295"}


id: PBO:0004797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM22 inner membrane protein import complex subunit Tim54 (predicted)","termid":"PBO:0004797"}


id: PBO:0069428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 693, pseudogene","termid":"PBO:0069428"}


id: MONDO:0007122
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Unequal pupil size, which may represent a benign physiologic variant or a manifestation of disease. Pathologic anisocoria reflects an abnormality in the musculature of the iris (iris diseases) or in the parasympathetic or sympathetic pathways that innervate the pupil. Physiologic anisocoria refers to an asymmetry of pupil diameter, usually less than 2mm, that is not associated with disease.","definition_xrefs":["MESH:D015875"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anisocoria","secondary_identifiers":["OMIM:106240","UMLS:C0003079","ICD10CM:H57.02","HP:0009916","ICD9:379.41","SCTID:13045009","MEDGEN:1944"],"synonyms":[{"name":"anisocoria","type":"exact"},{"name":"anisocoria (disease)","type":"exact"}],"termid":"MONDO:0007122","xrefs":{"Monarch":{"xref_id":"0007122"}}}


id: MONDO:0013578
data:
  {"annotated_genes":["SJAG_04980"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87706],"is_not":false,"summary":null,"term":"MONDO:0013578"}]},"cv_name":"mondo","definition":"An autosomal dominant non-syndromic intellectual disability that has material basis in an autosomal dominant mutation of DYRK1A on chromosome 21q22.13.","definition_xrefs":["DOID:0070037"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"autosomal dominant syndromic intellectual disability","termid":"MONDO:0100601"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04980":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0000426"],"is_obsolete":false,"name":"DYRK1A-related intellectual disability syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1799566","Orphanet:464306","UMLS:C5568143","OMIM:614104","GARD:13527"],"synonyms":[{"name":"MRD7","type":"exact"},{"name":"autosomal dominant intellectual disability 7","type":"exact"},{"name":"autosomal dominant mental retardation 7","type":"exact"},{"name":"autosomal dominant non-syndromic intellectual disability 7","type":"related"},{"name":"intellectual disability, autosomal dominant 7","type":"related"},{"name":"intellectual disability, autosomal dominant type 7","type":"exact"},{"name":"mental retardation, autosomal dominant 7","type":"related"},{"name":"mental retardation, autosomal dominant type 7","type":"exact"}],"termid":"MONDO:0013578","terms_by_termid":{"MONDO:0013578":null},"xrefs":{"Monarch":{"xref_id":"0013578"}}}


id: PBO:0046786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enhancer of zeste 1 polycomb repressive complex 2 subunit","termid":"PBO:0046786"}


id: GO:0050491
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + sulcatol = H+ + NADH + sulcatone.","definition_xrefs":["EC:1.1.1.260","RHEA:24484"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"sulcatone reductase activity","secondary_identifiers":["MetaCyc:1.1.1.260-RXN","KEGG_REACTION:R05678"],"synonyms":[{"name":"sulcatol:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0050491"}


id: PBO:0085235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pentafunctional arom protein; catalyzes steps 2 through 6 in the biosynthesis of chorismate, which is a precursor to aromatic amino acids","termid":"PBO:0085235"}


id: GO:0052442
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism modulates the frequency, rate or extent of symbiont jasmonic acid-mediated signal transduction pathways during the symbiont defense response. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of defense-related symbiont jasmonic acid-mediated signal transduction pathway (obsolete GO:0052442)","synonyms":[{"name":"modulation by organism of defense-related symbiont jasmonic acid-mediated signal transduction pathway","type":"exact"},{"name":"modulation of defense-related symbiont JA-mediated signal transduction pathway by organism","type":"exact"}],"termid":"GO:0052442"}


id: PBO:0029128
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_Golgi_apparatus_morphology","termid":"PBO:0029128"}


id: PBO:0002965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone lysine methyltransferase Set2","termid":"PBO:0002965"}


id: MONDO:0007729
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental dysplasia of the hip","termid":"MONDO:0000158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"developmental dysplasia of the hip 1","secondary_identifiers":["DOID:0060931","OMIM:142700","MEDGEN:266288","UMLS:C1306065"],"synonyms":[{"name":"DDH1","type":"exact"},{"name":"acetabular dysplasia","type":"broad"},{"name":"developmental dysplasia of the hip 1","type":"exact"},{"name":"hip dysplasia, congenital","type":"broad"},{"name":"hip dysplasia, developmental","type":"related"}],"termid":"MONDO:0007729","xrefs":{"Monarch":{"xref_id":"0007729"}}}


id: GO:0048761
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a collenchyma cell. This is a plant cell in which the primary cell walls are unevenly thickened, with most thickening occurring at the cell corners. Cells are living and able to grow, they are elongated, and lignin and secondary walls absent. Collenchyma cells make up collenchyma tissue which acts as a supporting tissue in growing shoots, leaves and petioles. This tissue is often arranged in cortical ribs, as seen prominently in celery and rhubarb petioles.","definition_xrefs":["CL:0000330","GOC:jid","PO:0000075"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"collenchyma cell differentiation","termid":"GO:0048761"}


id: PBO:0079997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 35","termid":"PBO:0079997"}


id: GO:0090145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the mitochondrial nucleoid that contributes to mitochondrial division.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial nucleoid organization involved in mitochondrial fission (obsolete GO:0090145)","synonyms":[{"name":"mitochondrial nucleoid organisation involved in mitochondrial fission","type":"exact"}],"termid":"GO:0090145"}


id: PBO:0041930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromobox 1 pseudogene 5","termid":"PBO:0041930"}


id: MONDO:0018632
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 11","termid":"MONDO:0016910"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"11q22.2q22.3 microdeletion syndrome","secondary_identifiers":["MEDGEN:1805294","Orphanet:444002","UMLS:C5680062","GARD:21858"],"synonyms":[{"name":"11q22.2-q22.3 deletion syndrome","type":"exact"},{"name":"Del(11)(q22.2q22.3)","type":"exact"},{"name":"monosomy 11q22.2-q22.3","type":"exact"},{"name":"monosomy 11q22.2q22.3","type":"exact"}],"termid":"MONDO:0018632","xrefs":{"Monarch":{"xref_id":"0018632"}}}


id: FYECO:0000089
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which sodium oleate was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ fatty acid","termid":"FYECO:0000042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ Na oleate","synonyms":[{"name":"sodium oleate added","type":"exact"}],"termid":"FYECO:0000089"}


id: PBO:0091525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation elongation and termination factor eIF5A","termid":"PBO:0091525"}


id: MONDO:0016512
data:
  {"annotated_genes":["SJAG_00861"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87663],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007843"},{"annotations":[88698],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010465"}]},"cv_name":"mondo","definition":"Kabuki syndrome (KS) is a multiple congenital anomaly syndrome characterized by typical facial features, skeletal anomalies, mild to moderate intellectual disability and postnatal growth deficiency.","definition_xrefs":["Orphanet:2322"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic diaphragmatic or abdominal wall malformation (obsolete MONDO:0015216)","termid":"MONDO:0015216"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic anorectal malformation (obsolete MONDO:0015246)","termid":"MONDO:0015246"},{"relation_name":"excluded_subClassOf","term_name":"congenital entropion","termid":"MONDO:0020159"},{"relation_name":"excluded_subClassOf","term_name":"congenital ectropion","termid":"MONDO:0020161"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00861":null},"genotype_count":0,"is_obsolete":false,"name":"Kabuki syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:6810","DOID:0060473","MESH:C537705","NANDO:1200672","NCIT:C124837","NORD:1318","NANDO:2200956","SCTID:313426007","UMLS:C0796004","icd11.foundation:1104246467","OMIMPS:147920","MedDRA:10063935","MEDGEN:162897"],"synonyms":[{"name":"KMS","type":"exact"},{"name":"Kabuki make up syndrome","type":"exact"},{"name":"Kabuki make-up syndrome","type":"exact"},{"name":"NKS","type":"related"},{"name":"Niikawa-Kuroki syndrome","type":"exact"}],"termid":"MONDO:0016512","terms_by_termid":{"MONDO:0007843":null,"MONDO:0010465":null},"xrefs":{"Monarch":{"xref_id":"0016512"}}}


id: PBO:0049047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 37 like 1","termid":"PBO:0049047"}


id: PBO:0050080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group AT-hook 1","termid":"PBO:0050080"}


id: PBO:0015694
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by D. melanogaster ME31B","termid":"PBO:0015694"}


id: PBO:0063201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(rC) binding protein 1","termid":"PBO:0063201"}


id: PBO:0041257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 216","termid":"PBO:0041257"}


id: GO:0072310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a glomerular epithelial cell over time, from its formation to the mature structure. Glomerular epithelial cells are specialized epithelial cells that form part of the glomerulus; there are two types, glomerular parietal epithelial cells and glomerular visceral epithelial cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell development","termid":"GO:0002064"},{"relation_name":"part_of","term_name":"glomerular epithelial cell differentiation","termid":"GO:0072311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glomerular epithelial cell development","termid":"GO:0072310"}


id: GO:0140493
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A fatty acid beta-oxidation pathway acting on a very long-chain fatty acid. A very long-chain fatty acid has an aliphatic tail containing more than 22 carbons. The partway stars with the conversion of an acyl-CoA to a trans-2-enoyl-CoA, catalyzed by acyl-CoA oxidase; the electrons removed by oxidation pass directly to oxygen and produce hydrogen peroxide, which is cleaved by peroxisomal catalases. Fatty acid beta-oxidation begins with the addition of coenzyme A to a fatty acid, and ends when only two or three carbons remain (as acetyl-CoA or propionyl-CoA respectively).","definition_xrefs":["PMID:32169171","PMID:17028011","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid beta-oxidation using acyl-CoA oxidase","termid":"GO:0033540"},{"relation_name":"is_a","term_name":"very long-chain fatty acid catabolic process","termid":"GO:0042760"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"very long-chain fatty acid beta-oxidation","termid":"GO:0140493"}


id: MONDO:0007443
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital unilateral hypoplasia of depressor anguli oris is a congenital anomaly, characterized by the unilateral hypoplasia/agenesis of the depressor anguli oris muscle, resulting in an asymmetric crying facies in neonatal period/ infancy (drooping of one corner of the mouth during crying) while eye closure, nasolabial fold and forehead wrinkling are symmetric. While it can be isolated, this anomaly is also seen in 22q11.2 deletion syndrome and can be accompanied by other major congenital anomalies of the cardiovascular system, as well as less frequently the musculoskeletal, cervicofacial, respiratory, genitourinary, and, rarely, endocrine systems. When isolated, the condition is cosmetically insignificant as the infant gets older (as the muscle does not contribute significantly to facial expression in childhood/ adulthood).","definition_xrefs":["Orphanet:1166"],"direct_ancestors":[{"relation_name":"is_a","term_name":"22q11.2 deletion syndrome","termid":"MONDO:0018923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0002320","MONDO:0005267"],"is_obsolete":false,"name":"congenital unilateral hypoplasia of depressor anguli oris","secondary_identifiers":["UMLS:C0431406","SCTID:51409009","ICD9:759.89","GARD:16557","MEDGEN:140911","OMIM:125520"],"synonyms":[{"name":"Cayler cardiofacial syndrome","type":"related"},{"name":"asymmetric crying facies","type":"related"},{"name":"depressor anguli oris muscle, hypoplasia of","type":"related"},{"name":"facial paresis, partial, unilateral","type":"related"},{"name":"isolated asymmetric crying facies","type":"exact"}],"termid":"MONDO:0007443","xrefs":{"Monarch":{"xref_id":"0007443"}}}


id: MONDO:0003094
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete mucoepidermoid thyroid carcinoma (obsolete MONDO:0003094)","termid":"MONDO:0003094","xrefs":{"Monarch":{"xref_id":"0003094"}}}


id: PR:O13651
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An isoleucine--tRNA ligase, cytoplasmic that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02832","PRO:DNx","PANTHER:PTHR11946:SF11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isoleucine--tRNA ligase, cytoplasmic (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC8D2.06","secondary_identifiers":["UniProtKB:O13651"],"synonyms":[{"name":"IleRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-IARS","type":"exact"},{"name":"isoleucyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13651"}


id: MONDO:0011479
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition characterized by development of symptoms while standing. It is an autonomic nervous system disorder and the symptoms are relieved once the person sits back down. Symptoms include heart.","definition_xrefs":["EFO:1000645"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart conduction disease","termid":"MONDO:0000992"},{"relation_name":"is_a","term_name":"inherited orthostatic hypotension","termid":"MONDO:0021272"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"postural orthostatic tachycardia syndrome","secondary_identifiers":["MEDGEN:226970","SCTID:371073003","UMLS:C1299624","NCIT:C85020","OMIM:604715","GARD:13591","Orphanet:443236","DOID:0111154","MESH:D054972","icd11.foundation:1533647472"],"synonyms":[{"name":"POTS","type":"exact"},{"name":"Soldiers heart","type":"related"},{"name":"familial orthostatic tachycardia due to norepinephrine transporter deficiency","type":"exact"},{"name":"irritable heart","type":"exact"},{"name":"neurocirculatory asthenia","type":"related"},{"name":"orhtostatic intolerance","type":"exact"},{"name":"orthostatic intolerance","type":"related"},{"name":"orthostatic intolerance due to NET deficiency","type":"exact"},{"name":"postural tachycardia syndrome due to NET deficiency","type":"exact"},{"name":"soldiers heart","type":"exact"}],"termid":"MONDO:0011479","xrefs":{"Monarch":{"xref_id":"0011479"}}}


id: GO:0021592
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the fourth ventricle over time, from its formation to the mature structure. The fourth ventricle is an irregularly shaped cavity in the rhombencephalon, between the medulla oblongata, the pons, and the isthmus in front, and the cerebellum behind. It is continuous with the central canal of the cord below and with the cerebral aqueduct above, and through its lateral and median apertures it communicates with the subarachnoid space.","definition_xrefs":["GOC:dgh","GOC:jid","GOC:dph","GO_REF:0000021","GOC:cls","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"ventricular system development","termid":"GO:0021591"},{"relation_name":"part_of","term_name":"hindbrain development","termid":"GO:0030902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fourth ventricle development","termid":"GO:0021592"}


id: PBO:0067948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 250","termid":"PBO:0067948"}


id: GO:0008636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Upregulation of the activity of a caspase, a group of cysteine proteases involved in apoptosis, by the addition of a phosphate group.","definition_xrefs":["GOC:dph","PMID:14744432","GOC:jl","GOC:tb","Wikipedia:Caspase"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of caspase activity by protein phosphorylation (obsolete GO:0008636)","synonyms":[{"name":"activation of caspase activity by protein amino acid phosphorylation","type":"exact"},{"name":"activation of caspase activity by protein phosphorylation","type":"exact"},{"name":"caspase activation via phosphorylation","type":"exact"}],"termid":"GO:0008636"}


id: MONDO:0005944
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Virus diseases caused by rhabdoviridae. Important infections include rabies; ephemeral fever; and vesicular stomatitis.","definition_xrefs":["MESH:D018353"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Mononegavirales infectious disease","termid":"MONDO:0005856"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rhabdoviridae infectious disease","secondary_identifiers":["MEDGEN:60221","UMLS:C0206751","EFO:0007469"],"synonyms":[{"name":"Rhabdoviridae infection","type":"related"},{"name":"infection, Rhabdoviridae","type":"related"},{"name":"infections, Rhabdoviridae","type":"related"}],"termid":"MONDO:0005944","xrefs":{"Monarch":{"xref_id":"0005944"}}}


id: PBO:0088580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, glutamate/glycine","termid":"PBO:0088580"}


id: PBO:0063441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphodiesterase 6C","termid":"PBO:0063441"}


id: PBO:0017486
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-actively_participates_in","termid":"PBO:0017486"}


id: GO:0140464
data:
  {"annotated_genes":["SJAG_03103","SJAG_01745"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93161,105424],"is_not":false,"summary":null,"term":"GO:0140464"}]},"cv_name":"biological_process","definition":"The localization of silent mating-type cassette heterochromatin at a specific location in the nucleus.","definition_xrefs":["PMID:26744419"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome attachment to the nuclear envelope","termid":"GO:0097240"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01745":null,"SJAG_03103":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0007049"],"is_obsolete":false,"name":"subnuclear spatial organization of silent mating-type cassette heterochromatin","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"silent mating-type cassette heterochromatin organization","type":"related"},{"name":"silent mating-type cassette heterochromatin spatial organization in the nucleus","type":"exact"}],"termid":"GO:0140464","terms_by_termid":{"GO:0140464":null}}


id: PATO:0001502
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A monadic quality of continuant inhering in a bearer by virtue of the bearer's being intricate and compounded.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complexity","termid":"PATO:0001502"}


id: MONDO:0100139
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A COVID-19 infection where individuals test positive for SARS-CoV-2 but have no symptoms across the entire course of the disease.","gene_count":0,"genotype_count":0,"name":"obsolete asymptomatic COVID-19 infection (obsolete MONDO:0100139)","termid":"MONDO:0100139","xrefs":{"Monarch":{"xref_id":"0100139"}}}


id: GO:0106367
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 2'-deoxyribonucleoside 5'-phosphate + dGTP = a 2'-deoxyribonucleoside 5'-diphosphate + dGDP.","definition_xrefs":["PMID:20497505","RHEA:62128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, phosphate group as acceptor","termid":"GO:0016776"},{"relation_name":"is_a","term_name":"nucleobase-containing compound kinase activity","termid":"GO:0019205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"deoxynucleoside phosphate kinase activity, dGTP as phosphate donor","termid":"GO:0106367"}


id: PBO:0048022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor receptor substrate 3","termid":"PBO:0048022"}


id: MONDO:0018089
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Double outlet right ventricle (DORV) is a rare cono-truncal anomaly in which both the aorta and pulmonary artery originate, either entirely or predominantly, from the morphologic right ventricle.","definition_xrefs":["Orphanet:3426"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ventricular septal defect","termid":"MONDO:0002070"},{"relation_name":"is_a","term_name":"conotruncal heart malformations","termid":"MONDO:0016581"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"double outlet right ventricle","secondary_identifiers":["NANDO:2200256","UMLS:C0013069","MEDGEN:41649","GARD:1908","MESH:D004310","NANDO:1200710","NANDO:2100076","DOID:6406","ICD10CM:Q20.1","NCIT:C98916","icd11.foundation:141717788","SCTID:204299009","MedDRA:10013611"],"synonyms":[{"name":"DORV","type":"exact"},{"name":"Dextrotransposition of aorta","type":"exact"},{"name":"double outlet right ventricle","type":"exact"}],"termid":"MONDO:0018089","xrefs":{"Monarch":{"xref_id":"0018089"}}}


id: PR:Q92363
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein FAM32A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01257","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C31G5.21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31G5.21","secondary_identifiers":["UniProtKB:Q92363"],"synonyms":[{"name":"Spom972h-FAM32A","type":"exact"}],"termid":"PR:Q92363"}


id: PBO:0061177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear-encoded mitochondrial tRNA-Gln (TTG) 7-1","termid":"PBO:0061177"}


id: GO:0030788
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + precorrin-2 = S-adenosyl-L-homocysteine + H+ + precorrin-3A.","definition_xrefs":["RHEA:16841","EC:2.1.1.130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016741"],"is_obsolete":false,"name":"precorrin-2 C20-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R03948","MetaCyc:2.1.1.130-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine--precorrin-2 methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:precorrin-4 C20-methyltransferase activity","type":"related"}],"termid":"GO:0030788"}


id: PBO:0062892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OXA1L mitochondrial inner membrane protein","termid":"PBO:0062892"}


id: GO:0061169
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of hair follicle placode formation, the developmental process in which a hair placode forms. An hair follicle placode is a thickening of the ectoderm that will give rise to the hair follicle bud.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of hair follicle placode formation","termid":"GO:0061168"},{"relation_name":"positively_regulates","term_name":"hair follicle placode formation","termid":"GO:0060789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hair placode formation","termid":"GO:0061169"}


id: FYPO:0004810
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is decreased, and the protein is instead visible in one or a few foci or dots in the cytoplasm.","definition_xrefs":["PomBase:mah","PMID:25543137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to nucleus, with protein mislocalized to cytoplasm","termid":"FYPO:0004056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to nucleus, with protein mislocalized to cytoplasmic foci","synonyms":[{"name":"decreased protein localisation to nucleus, with protein mislocalised to cytoplasmic foci","type":"exact"},{"name":"decreased protein localization to nucleus, with protein mislocalized to cytoplasmic foci, during mitotic interphase","type":"exact"},{"name":"decreased protein localization to nucleus, with protein mislocalized to cytoplasmic foci, during vegetative growth","type":"exact"}],"termid":"FYPO:0004810"}


id: PBO:0029098
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cell_population_growth_on_sulfate_sulfur_source","termid":"PBO:0029098"}


id: PBO:0091514
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. cerevisiae Mid Two-Like","termid":"PBO:0091514"}


id: GO:0036290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phosphorylation by a protein of a residue on an identical protein. For example, phosphorylation by the other kinase within a homodimer.","definition_xrefs":["GOC:jsg","PMID:20516151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein autophosphorylation","termid":"GO:0046777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein trans-autophosphorylation","synonyms":[{"name":"trans-autophosphorylation","type":"exact"}],"termid":"GO:0036290"}


id: MONDO:0004997
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, chondroid-producing, well-circumscribed, lytic neoplasm usually arising from the epiphysis of long bones. It is characterized by the presence of chondroblasts, osteoclast-like giant cells, chondroid formation, calcification, and mitotic activity. In aggressive cases, there is rearrangement of the 8q21 chromosome band. It occurs most frequently in children and young adults and rarely metastasizes.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone benign neoplasm","termid":"MONDO:0000631"},{"relation_name":"is_a","term_name":"benign chondrogenic neoplasm","termid":"MONDO:0024470"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondroblastoma","secondary_identifiers":["EFO:0000331","HP:0030432","DOID:2649","MEDGEN:40270","GARD:6047","ICDO:9230/0","MESH:D002804","ONCOTREE:CHBL","UMLS:C0008441","NANDO:2200051","NCIT:C2945"],"synonyms":[{"name":"CHBL","type":"related"},{"name":"chondroblastoma","type":"exact"},{"name":"chondroblastoma (disease)","type":"exact"},{"name":"chondroblastoma of bone","type":"exact"}],"termid":"MONDO:0004997","xrefs":{"Monarch":{"xref_id":"0004997"}}}


id: PBO:0088659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endocytic trafficking protein","termid":"PBO:0088659"}


id: GO:0010365
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of an ethylene biosynthetic process.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ethylene biosynthetic process","termid":"GO:0010364"},{"relation_name":"is_a","term_name":"positive regulation of sulfur amino acid metabolic process","termid":"GO:0031337"},{"relation_name":"is_a","term_name":"positive regulation of olefin biosynthetic process","termid":"GO:1900913"},{"relation_name":"positively_regulates","term_name":"ethylene biosynthetic process","termid":"GO:0009693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006790","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of ethylene biosynthetic process","termid":"GO:0010365"}


id: SO:0000916
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000916 edit_operation (obsolete SO:0000916)","synonyms":[{"name":"edit operation","type":"exact"}],"termid":"SO:0000916"}


id: GO:0008301
data:
  {"annotated_genes":["SJAG_04009","SJAG_04855","SJAG_04036","SJAG_00247","SJAG_05153"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91908,116889],"is_not":false,"summary":null,"term":"GO:0008301"},{"annotations":[104103],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110035"},{"annotations":[108891,110657],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044377"}]},"cv_name":"molecular_function","definition":"The activity of binding selectively and non-covalently to and distorting the original structure of DNA, typically a straight helix, into a bend, or increasing the bend if the original structure was intrinsically bent due to its sequence.","definition_xrefs":["GOC:krc","GOC:vw","PMID:10710711","PMID:19037758"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA binding","termid":"GO:0003677"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00247":null,"SJAG_04009":null,"SJAG_04036":null,"SJAG_04855":null,"SJAG_05153":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003677"],"is_obsolete":false,"name":"DNA binding, bending","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA bending activity","type":"exact"},{"name":"DNA bending involving DNA binding","type":"exact"}],"termid":"GO:0008301","terms_by_termid":{"GO:0008301":null,"GO:0044377":null,"GO:0110035":null}}


id: GO:0085035
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A projection from a cell or tissue that penetrates the host's cell wall and invaginates the host cell membrane.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection","termid":"GO:0042995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"haustorium","termid":"GO:0085035"}


id: GO:0035589
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by an extracellular purine nucleotide binding to its receptor, and ending with the regulation of a downstream cellular process.","definition_xrefs":["PMID:9755289","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purinergic nucleotide receptor signaling pathway","termid":"GO:0035590"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"G protein-coupled purinergic nucleotide receptor signaling pathway","synonyms":[{"name":"G-protein coupled purinergic nucleotide receptor signaling pathway","type":"exact"},{"name":"G-protein coupled purinergic nucleotide receptor signalling pathway","type":"exact"},{"name":"P2Y receptor signaling pathway","type":"exact"}],"termid":"GO:0035589"}


id: PBO:0068310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 13","termid":"PBO:0068310"}


id: MONDO:1011728
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease, non-human animal","termid":"MONDO:1011724"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin G2 deficiency, non-human animal","secondary_identifiers":["OMIA:000555"],"termid":"MONDO:1011728","xrefs":{"Monarch":{"xref_id":"1011728"}}}


id: PBO:0051442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-27","termid":"PBO:0051442"}


id: MONDO:0001813
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"blepharitis","termid":"MONDO:0004785"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"squamous blepharitis","secondary_identifiers":["UMLS:C0155174","DOID:13825","SCTID:58912008","MEDGEN:509829","ICD9:373.02","ICD10CM:H01.02"],"termid":"MONDO:0001813","xrefs":{"Monarch":{"xref_id":"0001813"}}}


id: PBO:0004799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Cki1","termid":"PBO:0004799"}


id: MONDO:0004928
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any disorder of the lymph nodes.","definition_xrefs":["NCIT:C35346"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphatic system disorder","termid":"MONDO:0005833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"lymph node disorder","secondary_identifiers":["SCTID:76616003","DOID:9942","MEDGEN:78802","UMLS:C0272394"],"synonyms":[{"name":"disease of lymph node","type":"exact"},{"name":"disease or disorder of lymph node","type":"exact"},{"name":"disorder of lymph node","type":"exact"},{"name":"lymph node disease","type":"exact"},{"name":"lymph node disease or disorder","type":"exact"},{"name":"lymph node disorder","type":"exact"}],"termid":"MONDO:0004928","xrefs":{"Monarch":{"xref_id":"0004928"}}}


id: PATO:0001540
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An amylose composition quality inhering in an bearer by virtue of the bearer's having negligible or no amylose content.","definition_xrefs":["TO:TO"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amylose composition","termid":"PATO:0001539"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutinous","termid":"PATO:0001540"}


id: PBO:0044685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dendrin","termid":"PBO:0044685"}


id: MONDO:0031219
data:
  {"annotated_genes":["SJAG_02187","SJAG_02226","SJAG_02748","SJAG_01620"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88750],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010159"},{"annotations":[87561],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030840"},{"annotations":[87562],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030841"},{"annotations":[87477],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030843"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"DNA repair disease","termid":"MONDO:0021190"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01620":null,"SJAG_02187":null,"SJAG_02226":null,"SJAG_02748":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0021190"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0021190"],"is_obsolete":false,"name":"mismatch repair cancer syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:17217","DOID:0112182","MEDGEN:78553","UMLS:C0265325","OMIMPS:276300","Orphanet:252202"],"termid":"MONDO:0031219","terms_by_termid":{"MONDO:0010159":null,"MONDO:0030840":null,"MONDO:0030841":null,"MONDO:0030843":null},"xrefs":{"Monarch":{"xref_id":"0031219"}}}


id: GO:0090648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of the provision of a combination of complex inanimate and social stimulations in the organism's housing environment.","definition_xrefs":["GOC:sl","PMID:23644055","PMID:25934034"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to external stimulus","termid":"GO:0009605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to environmental enrichment","synonyms":[{"name":"response to the introduction of novel objects","type":"narrow"}],"termid":"GO:0090648"}


id: GO:0075268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of aecium development, a process in which a cuplike structure containing chains of aeciospores is formed.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of reproductive fruiting body development","termid":"GO:0031155"},{"relation_name":"regulates","term_name":"aecium development","termid":"GO:0075267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of aecium development","termid":"GO:0075268"}


id: MOD:01057
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3',5'-dibromo-L-tyrosine","termid":"MOD:01023"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(79)Br and (81)Br labeled 3',5'-dibromotyrosine","termid":"MOD:01057"}


id: MONDO:0020539
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"extragonadal germ cell tumor","termid":"MONDO:0018201"},{"relation_name":"is_a","term_name":"nongerminomatous germ cell tumor","termid":"MONDO:0021656"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extragonadal non-dysgerminomatous germ cell tumor","secondary_identifiers":["GARD:19706","Orphanet:99913","MEDGEN:1843056","UMLS:C5681817"],"termid":"MONDO:0020539","xrefs":{"Monarch":{"xref_id":"0020539"}}}


id: RO:0002530
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x is immediately downstream of the sequence of y iff either (1) x and y have sequence units, and all units of x are downstream of all units of y, and x is sequentially adjacent to y, or (2) x and y are sequence units, in which case the immediately downstream relation is primitive and defined by context: for DNA bases, y would be adjacent and 5' to y","direct_ancestors":[{"relation_name":"is_a","term_name":"sequentially_adjacent_to","termid":"RO:0002515"},{"relation_name":"is_a","term_name":"is_downstream_of_sequence_of","termid":"RO:0002529"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_immediately_downstream_of_sequence_of","termid":"RO:0002530"}


id: PBO:0027632
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_acetylation_at_subtelomere","termid":"PBO:0027632"}


id: PBO:0015660
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Supressor of Cut Nine","termid":"PBO:0015660"}


id: GO:0090691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process that specifies plant organ primordium boundaries resulting in a restriction of organogenesis to a limited spatial domain and keeping the organ separate from surrounding tissues.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of anatomical boundary","termid":"GO:0048859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formation of plant organ boundary","termid":"GO:0090691"}


id: MOD:01341
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label -","definition_xrefs":["Unimod:90#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ESP-Tag light d0","termid":"MOD:00468"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESP-Tag light d0 - site K","synonyms":[{"name":"ESP","type":"related"},{"name":"ESP-Tag light d0","type":"related"}],"termid":"MOD:01341"}


id: PBO:0065780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutaminyl-tRNA amidotransferase subunit QRSL1","termid":"PBO:0065780"}


id: PBO:0017946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Tam8","termid":"PBO:0017946"}


id: GO:0001727
data:
  {"annotated_genes":["SJAG_05330","SJAG_02429","SJAG_01571","SJAG_00638","SJAG_01863","SJAG_04537","SJAG_00114","SJAG_04883"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95039,78253,73513],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004430"},{"annotations":[73300],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016303"},{"annotations":[93665],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052811"},{"annotations":[74381],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000285"},{"annotations":[81398],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016308"},{"annotations":[99479,67820],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004143"},{"annotations":[111762],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0141035"},{"annotations":[99480],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008481"}]},"cv_name":"molecular_function","definition":"Catalysis of the phosphorylation of a simple or complex lipid.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_00638":null,"SJAG_01571":null,"SJAG_01863":null,"SJAG_02429":null,"SJAG_04537":null,"SJAG_04883":null,"SJAG_05330":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"lipid kinase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-428273","Reactome:R-HSA-9695949"],"termid":"GO:0001727","terms_by_termid":{"GO:0000285":null,"GO:0004143":null,"GO:0004430":null,"GO:0008481":null,"GO:0016303":null,"GO:0016308":null,"GO:0052811":null,"GO:0141035":null}}


id: FYPO:0000791
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of actin cortical patches is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton morphology during vegetative growth","termid":"FYPO:0000350"},{"relation_name":"is_a","term_name":"abnormal actin cortical patch","termid":"FYPO:0003987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0004803","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal actin cortical patch morphology","synonyms":[{"name":"abnormal F-actin patch morphology","type":"exact"},{"name":"abnormal actin cortical patch morphology during mitotic cell cycle","type":"related"},{"name":"abnormal actin cortical patch morphology during vegetative growth","type":"exact"},{"name":"abnormal actin patch morphology","type":"exact"}],"termid":"FYPO:0000791"}


id: GO:0044081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a virus interferes with, inhibits or disrupts a nitric oxide mediated signal transduction in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["MITRE:tk","PMID:23167250","PMID:29089430"],"gene_count":0,"genotype_count":0,"name":"obsolete symbiont-mediated suppression of host nitric oxide-mediated signaling (obsolete GO:0044081)","synonyms":[{"name":"disruption of host nitric oxide-mediated signaling","type":"exact"},{"name":"modulation by symbiont of host nitric oxide mediated signal transduction","type":"exact"},{"name":"modulation of host nitric oxide-mediated signal transduction by symbiont","type":"exact"},{"name":"modulation of host nitric oxide-mediated signaling by symbiont","type":"exact"},{"name":"modulation of host nitric oxide-mediated signalling by symbiont","type":"exact"},{"name":"regulation by symbiont of host nitric oxide-mediated signal transduction","type":"broad"},{"name":"suppression of host nitric oxide-mediated signaling","type":"exact"}],"termid":"GO:0044081"}


id: PBO:0063585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PET117 cytochrome c oxidase chaperone","termid":"PBO:0063585"}


id: GO:1901027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of dextrin.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucan catabolic process","termid":"GO:0009251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"dextrin catabolic process","synonyms":[{"name":"dextrin breakdown","type":"exact"},{"name":"dextrin catabolism","type":"exact"},{"name":"dextrin degradation","type":"exact"}],"termid":"GO:1901027"}


id: MONDO:0012825
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare malignant soft tissue neoplasm of uncertain differentiation, characterized by the presence of chondroblast-like cells in a myxoid stroma and a multinodular growth pattern. The most common sites of involvement are the deep soft tissues of the extremities, particularly the thigh. It usually presents as an enlarging soft tissue mass. Patients may have long survivals, but local recurrences and metastases occur in approximately half of the cases. The most common site of metastasis is the lungs.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"extraskeletal myxoid chondrosarcoma","secondary_identifiers":["NCIT:C27502","GARD:17105","SCTID:404079008","OMIM:612237","ICD9:171.9","UMLS:C1275278","MEDGEN:220892","MESH:C563195","Orphanet:209916","DOID:6496","ONCOTREE:EMCHS"],"synonyms":[{"name":"EMC","type":"related"},{"name":"chondrosarcoma, extraskeletal myxoid","type":"related"},{"name":"extraosseous chondrosarcoma","type":"exact"},{"name":"extraskeletal chondrosarcoma","type":"exact"},{"name":"myxoid extraosseous chondrosarcoma","type":"exact"},{"name":"myxoid extraskeletal chondrosarcoma","type":"exact"}],"termid":"MONDO:0012825","xrefs":{"Monarch":{"xref_id":"0012825"}}}


id: PBO:0065968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD51 paralog B","termid":"PBO:0065968"}


id: PBO:0048717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLRX5 pseudogene 3","termid":"PBO:0048717"}


id: FYPO:0006577
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of P(1),P(4)-bis(5'-adenosyl) tetraphosphate (Ap4A) measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah","PMID:10970777"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular P(1),P(4)-bis(5'-adenosyl) tetraphosphate level","synonyms":[{"name":"increased P(1),P(4)-bis(5'-adenosyl) tetraphosphate accumulation","type":"related"},{"name":"increased cellular Ap4A level","type":"exact"},{"name":"increased cellular P(1),P(4)-bis(5'-adenosyl) tetraphosphate level during mitotic cell cycle","type":"related"},{"name":"increased cellular P(1),P(4)-bis(5'-adenosyl) tetraphosphate level during vegetative growth","type":"exact"},{"name":"increased cellular diadenosine 5',5'''-P1,P4-tetraphosphate level","type":"related"},{"name":"increased cellular diadenosine tetraphosphate level","type":"related"},{"name":"increased cellular diadenosyl tetraphosphate level","type":"broad"}],"termid":"FYPO:0006577"}


id: GO:0051747
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: methyl-dCpdG DNA + H2O = dCpdG DNA + methanol. This reaction is the hydrolytic removal of the methyl group on the 5 position of cytosine in DNA.","definition_xrefs":["PMID:10050851"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity","termid":"GO:0016787"},{"relation_name":"is_a","term_name":"DNA demethylase activity","termid":"GO:0035514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140097","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"cytosine C-5 DNA demethylase activity","synonyms":[{"name":"DNA demethylase activity","type":"broad"},{"name":"DNA methyltransferase activity acting on cytosine C-5","type":"exact"},{"name":"hydrolytic DNA demethylase activity","type":"broad"}],"termid":"GO:0051747"}


id: MONDO:0015675
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distomatosis is a group of parasitoses caused by flat worms that live in contact with epitheliums. Clinical classification depends on the organ infected by the adult parasite: liver, lungs, or intestines.","definition_xrefs":["Orphanet:1685"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parasitic infectious disease","termid":"MONDO:0005135"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distomatosis","secondary_identifiers":["GARD:1891","MEDGEN:21251","SCTID:26089000","ICD9:121.8","ICD9:121.9","UMLS:C0040820"],"synonyms":[{"name":"distomiasis","type":"exact"},{"name":"fluke infection","type":"exact"}],"termid":"MONDO:0015675","xrefs":{"Monarch":{"xref_id":"0015675"}}}


id: GO:0003316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification and formation of the apicobasal polarity of an myocardial progenitor cell that contributes to the formation of the heart rudiment.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of epithelial cell apical/basal polarity","termid":"GO:0045198"},{"relation_name":"part_of","term_name":"heart rudiment formation","termid":"GO:0003315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"establishment of myocardial progenitor cell apical/basal polarity","synonyms":[{"name":"myocardial progenitor epithelial polarization","type":"exact"}],"termid":"GO:0003316"}


id: MOD:00109
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-valine residue to L-valine amide.","definition_xrefs":["PubMed:5465996","PubMed:2578459","RESID:AA0100"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C1-amidated residue","termid":"MOD:00883"},{"relation_name":"is_a","term_name":"modified L-valine residue","termid":"MOD:00920"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-valine amide","synonyms":[{"name":"(2S)-2-amino-3-methylbutanamide","type":"exact"},{"name":"L-valine amide","type":"exact"},{"name":"MOD_RES Valine amide","type":"exact"},{"name":"ValN","type":"exact"},{"name":"valinamide","type":"exact"}],"termid":"MOD:00109"}


id: GO:2000228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of pancreatic A cell differentiation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell differentiation","termid":"GO:0030858"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of pancreatic A cell differentiation","termid":"GO:2000226"},{"relation_name":"positively_regulates","term_name":"pancreatic A cell differentiation","termid":"GO:0003310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of pancreatic A cell differentiation","synonyms":[{"name":"positive regulation of pancreatic alpha cell differentiation","type":"exact"}],"termid":"GO:2000228"}


id: PBO:0055755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA osteogenesis associated","termid":"PBO:0055755"}


id: GO:0004974
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a leukotriene to initiate a change in cell activity. Leukotrienes are pharmacologically active substances with a set of three conjugated double bonds; some contain a peptide group based on cysteine.","definition_xrefs":["ISBN:0198506732","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosanoid receptor activity","termid":"GO:0004953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"leukotriene receptor activity","termid":"GO:0004974"}


id: PBO:0068494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 78, pseudogene","termid":"PBO:0068494"}


id: PBO:0074051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 31","termid":"PBO:0074051"}


id: MONDO:0023188
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Freiberg's disease is rare condition that primarily affects the second or third metatarsal (the long bones of the foot). Although people of all ages can be affected by this condition, Freiberg's disease is most commonly diagnosed during adolescence through the second decade of life. Common signs and symptoms include pain and stiffness in the front of the foot, which often leads to a limp. Affected people may also experience swelling, limited range of motion, and tenderness of the affected foot. Symptoms are generally triggered by weight-bearing activities, including walking. The exact underlying cause of Freiberg's disease is currently unknown. Treatment depends on many factors, including the severity of condition; the signs and symptoms present; and the age of the patient.","definition_xrefs":["GARD:0002380"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"osteochondritis of tarsal/metatarsal bone","termid":"MONDO:0016086"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"osteochondrosis","termid":"MONDO:0018381"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Freiberg disease","secondary_identifiers":["Orphanet:564003","icd11.foundation:74359553","SCTID:28466007","UMLS:C0264099","MESH:C535636","GARD:2380","MEDGEN:75532"],"synonyms":[{"name":"Freiberg's disease","type":"exact"},{"name":"Freiberg's infraction","type":"related"},{"name":"Freiberg-Kohler syndrome","type":"related"},{"name":"Kohler's second disease","type":"related"},{"name":"Osteochondrosis of the metatarsal head, usually the second","type":"related"},{"name":"second metatarsal osteochondrosis","type":"related"}],"termid":"MONDO:0023188","xrefs":{"Monarch":{"xref_id":"0023188"}}}


id: MONDO:0859279
data:
  {"annotated_genes":["SJAG_05289"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87661],"is_not":false,"summary":null,"term":"MONDO:0859279"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neuronopathy, distal hereditary motor, autosomal recessive","termid":"MONDO:0015363"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005244","MONDO:0005559"],"is_obsolete":false,"name":"spinal muscular atrophy, distal, autosomal recessive, 6","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5774201","MEDGEN:1823974","DOID:0081425","OMIM:620011"],"synonyms":[{"name":"DSMA6","type":"exact"}],"termid":"MONDO:0859279","terms_by_termid":{"MONDO:0859279":null},"xrefs":{"Monarch":{"xref_id":"0859279"}}}


id: GO:1990262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of anti-Mullerian hormone to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription. Upon ligand binding, the receptor  forms a complex consisting of two type II and two type I transmembrane serine/threonine kinases. Type II receptors phosphorylate and activate type I receptors which autophosphorylate, then bind and activate SMAD transcriptional regulators.","definition_xrefs":["PMID:23624077","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor protein serine/threonine kinase signaling pathway","termid":"GO:0007178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"anti-Mullerian hormone receptor signaling pathway","synonyms":[{"name":"anti-Mullerian hormone signaling pathway","type":"exact"}],"termid":"GO:1990262"}


id: PBO:0005802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element","termid":"PBO:0005802"}


id: PR:O74329
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 40S ribosomal protein S29 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02488","PANTHER:PTHR12010:SF2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S29 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1685.09","secondary_identifiers":["UniProtKB:O74329"],"synonyms":[{"name":"Spom972h-RPS29","type":"exact"}],"termid":"PR:O74329"}


id: PBO:0079236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 9B","termid":"PBO:0079236"}


id: GO:1900307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of maltoheptaose transport.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of heptasaccharide transport","termid":"GO:1900295"},{"relation_name":"is_a","term_name":"regulation of maltoheptaose transport","termid":"GO:1900306"},{"relation_name":"negatively_regulates","term_name":"maltoheptaose transport","termid":"GO:2001105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of maltoheptaose transport","synonyms":[{"name":"down regulation of maltoheptaose transport","type":"exact"},{"name":"down-regulation of maltoheptaose transport","type":"exact"},{"name":"downregulation of maltoheptaose transport","type":"exact"},{"name":"inhibition of maltoheptaose transport","type":"narrow"}],"termid":"GO:1900307"}


id: SO:0000226
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding seryl tRNA (SO:000269).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_primary_transcript","termid":"SO:0000210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine_tRNA_primary_transcript","synonyms":[{"name":"serine tRNA primary transcript","type":"exact"}],"termid":"SO:0000226"}


id: MONDO:0007097
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"corneal dystrophy","termid":"MONDO:0018102"},{"relation_name":"is_a","term_name":"hereditary amyloidosis","termid":"MONDO:0018634"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0021179"}],"interesting_parent_ids":["MONDO:0021179","MONDO:0005244","MONDO:0005066","MONDO:0005328"],"is_obsolete":false,"name":"Finnish type amyloidosis","secondary_identifiers":["Orphanet:85448","GARD:2339","NANDO:1201063","MEDGEN:301243","OMIM:105120","UMLS:C1622345","ICD9:277.39","MESH:C537459","DOID:0050637","SCTID:419398009"],"synonyms":[{"name":"AGel amyloidosis","type":"related"},{"name":"amyloid cranial neuropathy with lattice corneal dystrophy","type":"related"},{"name":"amyloidosis 5","type":"related"},{"name":"amyloidosis V","type":"related"},{"name":"amyloidosis due to mutant gelsolin","type":"related"},{"name":"amyloidosis, Finnish type","type":"related"},{"name":"amyloidosis, MERETOJA type","type":"exact"},{"name":"amyloidosis, Meretoja type","type":"related"},{"name":"cerebral amyloid angiopathy, Gsn-related","type":"related"},{"name":"corneal dystrophy, lattice type 2","type":"related"},{"name":"familial amyloid polyneuropathy type IV","type":"exact"},{"name":"familial amyloidosis, Finnish type","type":"exact"},{"name":"gelsolin amyloidosis","type":"exact"},{"name":"hereditary amyloidosis, Finnish type","type":"exact"},{"name":"hereditary gelsolin amyloidosis","type":"related"},{"name":"lattice corneal dystrophy type II Finnish","type":"related"},{"name":"lattice corneal dystrophy, type 2","type":"related"},{"name":"meretoja syndrome","type":"exact"},{"name":"meretoja type amyloidosis","type":"related"}],"termid":"MONDO:0007097","xrefs":{"Monarch":{"xref_id":"0007097"}}}


id: PBO:0011139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transthyretin superfamily memeber, human c15orf24 ortholog","termid":"PBO:0011139"}


id: GO:2000723
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cardiac vascular smooth muscle cell differentiation.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of vascular associated smooth muscle cell differentiation","termid":"GO:1905064"},{"relation_name":"is_a","term_name":"negative regulation of cardiocyte differentiation","termid":"GO:1905208"},{"relation_name":"is_a","term_name":"regulation of cardiac vascular smooth muscle cell differentiation","termid":"GO:2000722"},{"relation_name":"negatively_regulates","term_name":"cardiac vascular smooth muscle cell differentiation","termid":"GO:0060947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiac vascular smooth muscle cell differentiation","synonyms":[{"name":"negative regulation of heart vascular smooth muscle cell differentiation","type":"exact"}],"termid":"GO:2000723"}


id: PBO:0002462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin BimC subfamily","termid":"PBO:0002462"}


id: MONDO:0019675
data:
  {"annotated_genes":["SJAG_00183","SJAG_03864","SJAG_00851"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88532],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010075"},{"annotations":[87923],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032724"},{"annotations":[87461],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011335"}]},"cv_name":"mondo","definition":"A form of skeletal dysplasia characterized by severe dwarfism, generalized articular hypermobility, and progressive spinal malalignment.","definition_xrefs":["PMID:12784311"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"},{"relation_name":"excluded_subClassOf","term_name":"obsolete disorder of O-xylosylglycan synthesis (obsolete MONDO:0017742)","termid":"MONDO:0017742"},{"relation_name":"excluded_subClassOf","term_name":"obsolete congenital disorder of glycosylation-related bone disorder (obsolete MONDO:0018292)","termid":"MONDO:0018292"},{"relation_name":"excluded_subClassOf","term_name":"obsolete congenital disorder of glycosylation with skin involvement (obsolete MONDO:0018293)","termid":"MONDO:0018293"},{"relation_name":"is_a","term_name":"spondyloepimetaphyseal dysplasia","termid":"MONDO:0100510"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00183":null,"SJAG_00851":null,"SJAG_03864":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondyloepimetaphyseal dysplasia with joint laxity","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:4982","ICD9:719.80","ICD9:756.9","MEDGEN:98148","MESH:C562968","Orphanet:93359","DOID:0112197","OMIMPS:271640","SCTID:254100000","UMLS:C0432243"],"synonyms":[{"name":"SEMD-JL","type":"exact"},{"name":"SEMDJL","type":"exact"},{"name":"SEMDJL1","type":"narrow"},{"name":"spondyloepimetaphyseal dysplasia joint laxity","type":"related"},{"name":"spondyloepimetaphyseal dysplasia with joint laxity","type":"exact"},{"name":"spondyloepimetaphyseal dysplasia with joint laxity type 1","type":"narrow"},{"name":"spondyloepimetaphyseal dysplasia with joint laxity, Beighton type","type":"narrow"}],"termid":"MONDO:0019675","terms_by_termid":{"MONDO:0010075":null,"MONDO:0011335":null,"MONDO:0032724":null},"xrefs":{"Monarch":{"xref_id":"0019675"}}}


id: PBO:0030411
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_maltase_activity","termid":"PBO:0030411"}


id: MONDO:0008936
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebellar ataxia and neurosensory deafness","secondary_identifiers":["MESH:C565869","UMLS:C1859304","MEDGEN:395224","OMIM:212850"],"synonyms":[{"name":"cerebellar ataxia and neurosensory deafness","type":"exact"}],"termid":"MONDO:0008936","xrefs":{"Monarch":{"xref_id":"0008936"}}}


id: PBO:0034726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dcp2-Dcp1 mRNA-decapping complex subunit Edc1","termid":"PBO:0034726"}


id: PBO:0053831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1096","termid":"PBO:0053831"}


id: PBO:0072612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal L24 domain containing 1 pseudogene 7","termid":"PBO:0072612"}


id: PBO:0047268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 246 member C (gene/pseudogene)","termid":"PBO:0047268"}


id: PBO:0043700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 5B pseudogene 6","termid":"PBO:0043700"}


id: PR:O94692
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A RuvB-like 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02903","PANTHER:PTHR11093:SF2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RuvB-like helicase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC83.08","secondary_identifiers":["UniProtKB:O94692"],"synonyms":[{"name":"Spom972h-RUVBL2","type":"exact"}],"termid":"PR:O94692"}


id: MONDO:0008277
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A polyp that arises from the stomach. This category includes neoplastic polyps (intestinal-type adenomatous polyps, gastric-type adenomas, and fundic gland polyps), and non-neoplastic polyps (hyperplastic polyps and hamartomatous polyps).","definition_xrefs":["NCIT:C3954"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stomach disorder","termid":"MONDO:0004298"},{"relation_name":"is_a","term_name":"polyp","termid":"MONDO:0005079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"stomach polyp","secondary_identifiers":["UMLS:C0236048","MEDGEN:68629","SCTID:87252009","MESH:C562464"],"synonyms":[{"name":"gastric polyp","type":"exact"},{"name":"gastric polyposa","type":"exact"},{"name":"gastric polyposis","type":"related"},{"name":"polyps of stomach","type":"exact"},{"name":"polyps of the stomach","type":"exact"}],"termid":"MONDO:0008277","xrefs":{"Monarch":{"xref_id":"0008277"}}}


id: MONDO:0021057
data:
  {"annotated_genes":["SJAG_03724","SJAG_02261","SJAG_01419"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87549],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012041"},{"annotations":[87016],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014630"},{"annotations":[88938],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044300"}]},"cv_name":"mondo","definition":"An inherited diseases haracterized by the development of adenomas in the rectum and colon; classified into classic FAP and attenuated FAP.","direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal polyposis syndrome","termid":"MONDO:0015185"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01419":null,"SJAG_02261":null,"SJAG_03724":null},"genotype_count":0,"is_obsolete":false,"name":"classic or attenuated familial adenomatous polyposis","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"classic or attenuated FAP","type":"exact"},{"name":"classic or attenuated familial adenomatous polyposis","type":"exact"}],"termid":"MONDO:0021057","terms_by_termid":{"MONDO:0012041":null,"MONDO:0014630":null,"MONDO:0044300":null},"xrefs":{"Monarch":{"xref_id":"0021057"}}}


id: GO:0070493
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by thrombin binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process.","definition_xrefs":["GOC:mah","PMID:1672265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"thrombin-activated receptor signaling pathway","synonyms":[{"name":"thrombin receptor signaling pathway","type":"exact"},{"name":"thrombin receptor signalling pathway","type":"exact"}],"termid":"GO:0070493"}


id: GO:0001975
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amphetamine stimulus. Amphetamines consist of a group of compounds related to alpha-methylphenethylamine.","definition_xrefs":["GOC:dph","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to amine","termid":"GO:0014075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to amphetamine","termid":"GO:0001975"}


id: GO:0008859
data:
  {"annotated_genes":["SJAG_06586"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[116293],"is_not":false,"summary":null,"term":"GO:0008859"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: RNA + H2O = 5'-phosphomononucleotides. Cleaves RNA in the 3' to 5' direction.","definition_xrefs":["EC:3.1.13.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3'-5'-RNA exonuclease activity","termid":"GO:0000175"}],"gene_count":1,"genes_by_uniquename":{"SJAG_06586":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0140098","GO:0004527","GO:0003674","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"exoribonuclease II activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:3.1.13.1-RXN"],"synonyms":[{"name":"5'-exoribonuclease activity","type":"related"},{"name":"BN ribonuclease activity","type":"related"},{"name":"Escherichia coli exo-RNase II","type":"related"},{"name":"RNase II","type":"related"},{"name":"RNase II activity","type":"exact"},{"name":"ribonuclease II activity","type":"related"},{"name":"ribonuclease Q","type":"related"}],"termid":"GO:0008859","terms_by_termid":{"GO:0008859":null}}


id: PBO:0077891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TP53RK binding protein","termid":"PBO:0077891"}


id: PR:O13749
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription initiation factor IIB that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11618:SF13","OMA:SCHPO01474","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription initiation factor IIB (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16E8.16","secondary_identifiers":["UniProtKB:O13749"],"synonyms":[{"name":"Spom972h-GTF2B","type":"exact"},{"name":"general transcription factor TFIIB (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13749"}


id: MONDO:0019812
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete tricuspid valve prolapse (obsolete MONDO:0019812)","termid":"MONDO:0019812","xrefs":{"Monarch":{"xref_id":"0019812"}}}


id: MONDO:0010335
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked cone-rod dystrophy","termid":"MONDO:0021155"},{"relation_name":"is_a","term_name":"CACNA1F-related retinopathy","termid":"MONDO:0700243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"X-linked cone-rod dystrophy 3","secondary_identifiers":["MEDGEN:336932","DOID:0111007","GARD:10654","OMIM:300476","UMLS:C1845407","MESH:C564507"],"synonyms":[{"name":"CORDX3","type":"exact"},{"name":"X-linked cone-rod dystrophy type 3","type":"exact"},{"name":"cone-rod dystrophy X-linked 3","type":"related"},{"name":"cone-rod dystrophy, X-linked, 3","type":"related"},{"name":"cone-rod dystrophy, X-linked, 3, X-linked recessive","type":"exact"},{"name":"cone-rod dystrophy, X-linked, type 3","type":"exact"}],"termid":"MONDO:0010335","xrefs":{"Monarch":{"xref_id":"0010335"}}}


id: PR:O60126
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA topoisomerase 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04045","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA topoisomerase 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16G5.12c","secondary_identifiers":["UniProtKB:O60126"],"synonyms":[{"name":"DNA topoisomerase III (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-topB","type":"exact"}],"termid":"PR:O60126"}


id: PBO:0074660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 49","termid":"PBO:0074660"}


id: FYPO:0001166
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cells grow normally (i.e. indistinguishably from wild type) in a medium containing fructose as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0002060","FYPO:0000257","FYPO:0002057","FYPO:0002058"],"is_obsolete":false,"name":"normal growth on fructose carbon source","synonyms":[{"name":"normal cell population growth on fructose carbon source","type":"exact"},{"name":"normal vegetative cell population growth on fructose carbon source","type":"exact"}],"termid":"FYPO:0001166"}


id: PBO:0086832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function, potential Cdc28p substrate; transcription is activated by paralogous transcription factors Yrm1p and Yrr1p along with genes involved in multidrug resistance; YGR035C has a paralog, YLR346C, that arose from the whole genome duplication","termid":"PBO:0086832"}


id: GO:0120327
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A telopode is a plasma membrane bounded cell projection that is present on a telocyte and is tens to hundreds of microns long. Telopodes form a labyrinthine system communicating through gap junctions.","definition_xrefs":["PMID:20367664","GOC:krc","MESH:D000067617"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection","termid":"GO:0120025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"telopode","termid":"GO:0120327"}


id: PBO:0051865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ISG15 ubiquitin like modifier","termid":"PBO:0051865"}


id: GO:0004285
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of protein hormones, neuropeptides and renin from their precursors, generally by cleavage of -Lys-Arg-Xaa at the Arg-Xaa bond.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete proprotein convertase 1 activity (obsolete GO:0004285)","synonyms":[{"name":"NEC 1 activity","type":"narrow"},{"name":"PC1 activity","type":"narrow"},{"name":"neuroendocrine convertase 1 activity","type":"narrow"},{"name":"prohormone convertase 3","type":"related"},{"name":"prohormone convertase I activity","type":"narrow"},{"name":"proprotein convertase 1 activity","type":"exact"}],"termid":"GO:0004285"}


id: GO:0060274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The homeostatic process in which a population of cells changes its metabolic activity resulting in the rate of death in the population equaling the rate of reproduction. Stationary phase can be in response to limited nutrients or a build-up of toxic substances in the environment.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete maintenance of stationary phase (obsolete GO:0060274)","termid":"GO:0060274"}


id: GO:0150136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of interleukin-37 production.","definition_xrefs":["PMID:30362558","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-37 production","termid":"GO:0150137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of interleukin-37 production","synonyms":[{"name":"regulation of interleukin-37 biosynthetic process","type":"narrow"}],"termid":"GO:0150136"}


id: PBO:0050317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 19","termid":"PBO:0050317"}


id: MONDO:0010812
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macrocytosis, familial","secondary_identifiers":["MESH:C564004","OMIM:600084","MEDGEN:333150","UMLS:C1838656"],"synonyms":[{"name":"macrocytosis, familial","type":"exact"}],"termid":"MONDO:0010812","xrefs":{"Monarch":{"xref_id":"0010812"}}}


id: GO:0009641
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Shade avoidance is a set of responses that plants display when they are subjected to the shade of another plant. It often includes elongation, altered flowering time, increased apical dominance and altered partitioning of resources. Plants are able to distinguish between the shade of an inanimate object (e.g. a rock) and the shade of another plant due to the altered balance between red and far-red light in the shade of a plant; this balance between red and far-red light is perceived by phytochrome.","definition_xrefs":["Wikipedia:Shade_avoidance"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to red or far red light","termid":"GO:0009639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"shade avoidance","termid":"GO:0009641"}


id: FYPO:0006336
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleation of microtubules from one or more microtubule organizing centers (MTOCs) occurs to a lesser extent than normal during mitosis.","definition_xrefs":["GO:0051418","PomBase:mah","PMID:8834801"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased microtubule nucleation during vegetative growth","termid":"FYPO:0006335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000054","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased mitotic microtubule nucleation","synonyms":[{"name":"decreased microtubule nucleation by microtubule organizing center during mitosis","type":"exact"},{"name":"decreased microtubule nucleation during M phase of mitotic cell cycle","type":"related"},{"name":"decreased microtubule nucleation during mitosis","type":"exact"},{"name":"decreased mitotic microtubule nucleation during vegetative growth","type":"exact"},{"name":"reduced mitotic microtubule nucleation","type":"exact"}],"termid":"FYPO:0006336"}


id: GO:0021945
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process that increases the extent of granule cell motility using intracellular calcium signaling mechanisms during radial migration.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:dph","GOC:jid","GOC:dgh","PMID:15157725","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cerebellar granule cell migration by calcium (obsolete GO:0021945)","synonyms":[{"name":"calcium-mediated activation of granule cell migration","type":"narrow"},{"name":"calcium-mediated positive regulation of granule cell migration","type":"exact"},{"name":"calcium-mediated stimulation of granule cell migration","type":"narrow"},{"name":"calcium-mediated up regulation of granule cell migration","type":"exact"},{"name":"calcium-mediated up-regulation of granule cell migration","type":"exact"},{"name":"calcium-mediated upregulation of granule cell migration","type":"exact"}],"termid":"GO:0021945"}


id: GO:0006173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dADP, deoxyadenosine diphosphate (2'-deoxyadenosine 5'-diphosphate).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleotide biosynthetic process","termid":"GO:0009153"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside diphosphate biosynthetic process","termid":"GO:0009183"},{"relation_name":"is_a","term_name":"dADP metabolic process","termid":"GO:0046056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"dADP biosynthetic process","synonyms":[{"name":"dADP anabolism","type":"exact"},{"name":"dADP biosynthesis","type":"exact"},{"name":"dADP formation","type":"exact"},{"name":"dADP synthesis","type":"exact"}],"termid":"GO:0006173"}


id: RO:0002481
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_interaction_relation_helper_property","termid":"RO:0002564"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_kinase_activity","termid":"RO:0002481"}


id: FYPO:0001613
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-aspartate measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular aspartate level","synonyms":[{"name":"decreased cellular L-aspartate level","type":"exact"},{"name":"decreased cellular aspartate level during mitotic cell cycle","type":"related"},{"name":"decreased cellular aspartate level during vegetative growth","type":"exact"},{"name":"decreased cellular aspartic acid level","type":"related"},{"name":"decreased cellular level aspartate level","type":"exact"},{"name":"decreased level of aspartate in cell","type":"exact"},{"name":"reduced cellular aspartate level","type":"exact"},{"name":"reduced level of aspartate in cell","type":"exact"}],"termid":"FYPO:0001613"}


id: PBO:0083264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; not conserved in closely related Saccharomyces species; 5% of ORF overlaps the verified gene IMP1","termid":"PBO:0083264"}


id: GO:0070567
data:
  {"annotated_genes":["SJAG_02288","SJAG_01704","SJAG_00946","SJAG_04628","SJAG_03563","SJAG_00426"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72070,76569],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052927"},{"annotations":[71605],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004105"},{"annotations":[77106],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004306"},{"annotations":[81803,121078],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004605"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a cytidylyl group to an acceptor.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidyltransferase activity","termid":"GO:0016779"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00426":null,"SJAG_00946":null,"SJAG_01704":null,"SJAG_02288":null,"SJAG_03563":null,"SJAG_04628":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016779","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"cytidylyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"PMID:25318672":null},"termid":"GO:0070567","terms_by_termid":{"GO:0004105":null,"GO:0004306":null,"GO:0004605":null,"GO:0008654":null,"GO:0052927":null}}


id: PBO:0005219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L12.1/L12A","termid":"PBO:0005219"}


id: PATO:0001622
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A turgor which is relatively high.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"turgor","termid":"PATO:0001620"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased turgor","synonyms":[{"name":"high turgor","type":"exact"}],"termid":"PATO:0001622"}


id: PBO:0053537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 539","termid":"PBO:0053537"}


id: GO:0032818
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of natural killer cell proliferation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of natural killer cell activation","termid":"GO:0032815"},{"relation_name":"is_a","term_name":"regulation of natural killer cell proliferation","termid":"GO:0032817"},{"relation_name":"is_a","term_name":"negative regulation of lymphocyte proliferation","termid":"GO:0050672"},{"relation_name":"negatively_regulates","term_name":"natural killer cell proliferation","termid":"GO:0001787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of natural killer cell proliferation","synonyms":[{"name":"down regulation of natural killer cell proliferation","type":"exact"},{"name":"down-regulation of natural killer cell proliferation","type":"exact"},{"name":"downregulation of natural killer cell proliferation","type":"exact"},{"name":"inhibition of natural killer cell proliferation","type":"narrow"},{"name":"negative regulation of NK cell proliferation","type":"exact"}],"termid":"GO:0032818"}


id: PBO:0043583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type XV alpha 1 chain","termid":"PBO:0043583"}


id: PBO:0045263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delta/notch like EGF repeat containing","termid":"PBO:0045263"}


id: MONDO:0002319
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A metabolic disorder that affects the phosphate homeostasis.","definition_xrefs":["NCIT:C97095"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mineral metabolism disease","termid":"MONDO:0000226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"phosphorus metabolism disease","secondary_identifiers":["MESH:D010760","MEDGEN:19276","ICD10CM:E83.3","SCTID:87049008","ICD9:275.3","UMLS:C0031707","DOID:2485"],"synonyms":[{"name":"disorder of phosphorus metabolism","type":"exact"},{"name":"phosphorus disorder","type":"exact"},{"name":"phosphorus metabolic disorder","type":"exact"},{"name":"phosphorus metabolism disorder","type":"exact"}],"termid":"MONDO:0002319","xrefs":{"Monarch":{"xref_id":"0002319"}}}


id: PBO:0064961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 13","termid":"PBO:0064961"}


id: PBO:0069673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 950, pseudogene","termid":"PBO:0069673"}


id: FYPO:0002562
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the actomyosin contractile ring begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to actomyosin contractile ring","termid":"FYPO:0002560"},{"relation_name":"is_a","term_name":"delayed onset of protein localization to cell division site","termid":"FYPO:0003946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000032","FYPO:0001985","FYPO:0000631","FYPO:0000138","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"delayed onset of protein localization to actomyosin contractile ring","synonyms":[{"name":"delayed onset of protein localisation to actomyosin contractile ring","type":"exact"},{"name":"delayed onset of protein localization to actomyosin contractile ring during mitotic cell cycle","type":"related"},{"name":"delayed onset of protein localization to actomyosin contractile ring during vegetative growth","type":"exact"},{"name":"delayed onset of protein localization to actomyosin contractile ring involved in mitotic cytokinesis","type":"exact"},{"name":"delayed onset of protein localization to contractile ring","type":"exact"},{"name":"delayed onset of protein localization to cytokinetic contractile ring","type":"exact"},{"name":"delayed onset of protein localization to mitotic contractile ring","type":"exact"},{"name":"delayed onset of protein recruitment to actomyosin contractile ring","type":"related"},{"name":"delayed protein localization to actomyosin contractile ring","type":"exact"}],"termid":"FYPO:0002562"}


id: GO:0019402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving galactitol, the hexitol derived by the reduction of the aldehyde group of either D- or L-galactose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexitol metabolic process","termid":"GO:0006059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"galactitol metabolic process","synonyms":[{"name":"galactitol metabolism","type":"exact"}],"termid":"GO:0019402"}


id: PBO:0081514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 420","termid":"PBO:0081514"}


id: PBO:0116746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNF2 related chromatin remodeling ATPase with DExD box 1","termid":"PBO:0116746"}


id: GO:0006063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving uronic acid, any monocarboxylic acid formally derived by oxidizing to a carboxyl group the terminal hydroxymethylene group of either an aldose with four or more carbon atoms in the molecule, or of any glycoside derived from such an aldose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"uronic acid metabolic process","synonyms":[{"name":"uronic acid metabolism","type":"exact"}],"termid":"GO:0006063"}


id: PBO:0112852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coilin, Mug174","termid":"PBO:0112852"}


id: GO:0010725
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of primitive erythrocyte differentiation. Primitive erythrocyte differentiation occurs as part of the process of primitive hemopoiesis.","definition_xrefs":["GOC:dph","GOC:add","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of erythrocyte differentiation","termid":"GO:0045646"},{"relation_name":"regulates","term_name":"primitive erythrocyte differentiation","termid":"GO:0060319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of primitive erythrocyte differentiation","synonyms":[{"name":"regulation of primitive RBC differentiation","type":"exact"},{"name":"regulation of primitive erythropoeisis","type":"exact"},{"name":"regulation of primitive red blood cell differentiation","type":"exact"}],"termid":"GO:0010725"}


id: PBO:0113458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of Slx5-Slx8 SUMO-targeted ubiquitin ligase (STUbL) complex; role in proteolysis of spindle positioning protein Kar9, DNA repair proteins Rad52p and Rad57p; stimulated by SUMO-modified substrates; contains a C-terminal RING domain; forms nuclear foci upon DNA replication stress; required for maintenance of genome integrity like human ortholog RNF4","termid":"PBO:0113458"}


id: GO:2000427
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of apoptotic cell clearance.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of phagocytosis","termid":"GO:0050766"},{"relation_name":"is_a","term_name":"regulation of apoptotic cell clearance","termid":"GO:2000425"},{"relation_name":"positively_regulates","term_name":"apoptotic cell clearance","termid":"GO:0043277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of apoptotic cell clearance","synonyms":[{"name":"positive regulation of apoptotic cell removal","type":"exact"},{"name":"positive regulation of efferocytosis","type":"exact"},{"name":"positive regulation of programmed cell clearance","type":"exact"}],"termid":"GO:2000427"}


id: PBO:0036419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L7a involved in ribosome biogenesis","termid":"PBO:0036419"}


id: MONDO:0019219
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of biogenic amine metabolism and transport","termid":"MONDO:0019250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"inborn disorder of neurotransmitter metabolism and transport","secondary_identifiers":["GARD:18950","UMLS:C5681289","MEDGEN:1842206","Orphanet:79169"],"synonyms":[{"name":"disorder of neurotransmitter metabolism and transport","type":"related"}],"termid":"MONDO:0019219","xrefs":{"Monarch":{"xref_id":"0019219"}}}


id: PBO:0074823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 19C","termid":"PBO:0074823"}


id: PBO:0087670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the INO80 chromatin remodeling complex; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0087670"}


id: GO:0047204
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucarate + chlorogenate = (-)-quinate + 2-O-caffeoylglucarate.","definition_xrefs":["RHEA:23204","EC:2.3.1.98"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-hydroxycinnamoyltransferase activity","termid":"GO:0050737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"chlorogenate-glucarate O-hydroxycinnamoyltransferase activity","secondary_identifiers":["MetaCyc:2.3.1.98-RXN","KEGG_REACTION:R02998"],"synonyms":[{"name":"chlorogenate:glucarate O-(hydroxycinnamoyl)transferase activity","type":"related"},{"name":"chlorogenate:glucarate caffeoyltransferase activity","type":"related"},{"name":"chlorogenic acid:glucaric acid O-caffeoyltransferase activity","type":"related"}],"termid":"GO:0047204"}


id: PBO:0086475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative mitochondrial protein of unknown function; identified by homology; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm","termid":"PBO:0086475"}


id: MONDO:0958129
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neuronopathy, distal hereditary motor, autosomal recessive","termid":"MONDO:0015363"},{"relation_name":"is_a","term_name":"coenzyme Q10 deficiency","termid":"MONDO:0018151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069","MONDO:0005559","MONDO:0006025","MONDO:0005244"],"is_obsolete":false,"name":"COQ7-related distal hereditary motor neuropathy","secondary_identifiers":["Orphanet:658778","MEDGEN:1863922","UMLS:C5925143"],"termid":"MONDO:0958129","xrefs":{"Monarch":{"xref_id":"0958129"}}}


id: GO:0031907
data:
  {"annotated_genes":["SJAG_04823","SJAG_00706","SJAG_00326","SJAG_00947","SJAG_02496","SJAG_00702","SJAG_02630"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[120169,61604,72393,116605,117622,113700,107134],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005782"}]},"cv_name":"cellular_component","definition":"The volume enclosed by the membranes of a microbody.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular organelle lumen","termid":"GO:0070013"},{"relation_name":"part_of","term_name":"microbody","termid":"GO:0042579"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00326":null,"SJAG_00702":null,"SJAG_00706":null,"SJAG_00947":null,"SJAG_02496":null,"SJAG_02630":null,"SJAG_04823":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"microbody lumen","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000044":null,"GO_REF:0000107":null},"termid":"GO:0031907","terms_by_termid":{"GO:0005782":null}}


id: GO:0090656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A telomere maintenance process that results in the formation of a telomeric circle, or t-circle. A t-circle is an extrachromosomal duplex or single-stranded circular DNA molecule composed of t-arrays. T-circles are involved in the control of telomere length via alternative-lengthening of telomeres (ALT) pathway and telomere rapid deletion (TRD).","definition_xrefs":["PMID:19581589","GOC:BHF","PMID:19809492","GOC:BHF_telomere","PMID:19214183","PMID:19858100","GOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of extrachromosomal circular DNA","termid":"GO:0001325"},{"relation_name":"part_of","term_name":"telomere maintenance via telomere trimming","termid":"GO:0090737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0032200","GO:0006259","GO:0044085"],"is_obsolete":false,"name":"t-circle formation","synonyms":[{"name":"telomeric circle formation","type":"exact"}],"termid":"GO:0090656"}


id: MONDO:0007609
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any gingival fibromatosis in which the cause of the disease is a mutation in the SOS1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary gingival fibromatosis","termid":"MONDO:0016070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibromatosis, gingival, 1","secondary_identifiers":["GARD:6509","MEDGEN:1647111","UMLS:C4551558","OMIM:135300"],"synonyms":[{"name":"GGF1","type":"related"},{"name":"GINGF","type":"related"},{"name":"GINGF1","type":"related"},{"name":"HGF1","type":"related"},{"name":"SOS1 gingival fibromatosis","type":"exact"},{"name":"SOS1 hereditary gingival fibromatosis","type":"exact"},{"name":"fibromatosis gingival, hereditary, 1","type":"related"},{"name":"fibromatosis, gingival, 1","type":"exact"},{"name":"fibromatosis, gingival, hereditary","type":"related"},{"name":"fibromatosis, gingival, type 1","type":"exact"},{"name":"gingival fibromatosis caused by mutation in SOS1","type":"exact"},{"name":"gingival fibromatosis, 1","type":"related"},{"name":"hereditary gingival fibromatosis caused by mutation in SOS1","type":"exact"},{"name":"hereditary gingival fibromatosis, 1","type":"related"}],"termid":"MONDO:0007609","xrefs":{"Monarch":{"xref_id":"0007609"}}}


id: MONDO:0022559
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A central nervous system vasculitis that has a benign course, with acute onset of neurologic symptoms, usually in the form of severe headache and/or a focal neurologic event.","definition_xrefs":["PMID:17043471"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system vasculitis","termid":"MONDO:0003346"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign angiitis of the central nervous system","secondary_identifiers":["GARD:8704"],"synonyms":[{"name":"BACNS","type":"related"}],"termid":"MONDO:0022559","xrefs":{"Monarch":{"xref_id":"0022559"}}}


id: PBO:0048034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibronectin type III and SPRY domain containing 1 like","termid":"PBO:0048034"}


id: MONDO:0008414
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A schizophrenia that has material basis in an autosomal dominant mutation of SCZD1 on chromosome 5q23-q35.","definition_xrefs":["DOID:0070077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"schizophrenia","termid":"MONDO:0005090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"schizophrenia 1","secondary_identifiers":["MEDGEN:65084","OMIM:181510","UMLS:C0220702"],"synonyms":[{"name":"SCZD1","type":"exact"},{"name":"schizophrenia 1","type":"exact"},{"name":"schizophrenia 1 with or without an affective disorder","type":"related"},{"name":"schizophrenia susceptibility locus, chromosome 5-related","type":"related"}],"termid":"MONDO:0008414","xrefs":{"Monarch":{"xref_id":"0008414"}}}


id: GO:2000056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of Wnt signaling pathway involved in digestive tract morphogenesis.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of Wnt signaling pathway involved in digestive tract morphogenesis (obsolete GO:2000056)","synonyms":[{"name":"regulation of Wnt receptor signaling pathway involved in digestive tract morphogenesis","type":"exact"},{"name":"regulation of Wnt receptor signalling pathway involved in digestive tract morphogenesis","type":"exact"},{"name":"regulation of Wnt-activated signaling pathway involved in digestive tract morphogenesis","type":"related"}],"termid":"GO:2000056"}


id: PBO:0075508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal peptidase complex subunit 1","termid":"PBO:0075508"}


id: MONDO:0001493
data:
  {"annotated_genes":["SJAG_03866","SJAG_04757"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88428,88429],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009935"}]},"cv_name":"mondo","definition":"Heart disease which occurs as a result of a primary pulmonary disease. Cor pulmonale most often manifests as right ventricular hypertrophy; it can also lead to right ventricular failure.","definition_xrefs":["NCIT:C34478"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cor pulmonale","termid":"MONDO:0004596"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03866":null,"SJAG_04757":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"chronic pulmonary heart disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:116042","SCTID:87837008","DOID:12326","UMLS:C0238074","ICD9:416.9","NANDO:2200299","ICD9:416.8"],"synonyms":[{"name":"Cor pulmonale","type":"broad"}],"termid":"MONDO:0001493","terms_by_termid":{"MONDO:0009935":null},"xrefs":{"Monarch":{"xref_id":"0001493"}}}


id: PR:Q9USL7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rsm18 gene.","definition_xrefs":["UniProtKB:Q9USL7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"37S ribosomal protein rsm18, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18B5.04","synonyms":[{"name":"Spom972h-rsm18","type":"exact"}],"termid":"PR:Q9USL7"}


id: MOD:01582
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a serine residue with the Applied Biosystems iTRAQ8plex-121 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-121 reporter+balance reagent acylated residue","termid":"MOD:01577"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"},{"relation_name":"is_a","term_name":"O3-acylated L-serine","termid":"MOD:02003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-121 reporter+balance reagent O3-acylated serine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01582"}


id: GO:0004314
data:
  {"annotated_genes":["SJAG_04107","SJAG_03972"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[60357,71959],"is_not":false,"summary":null,"term":"GO:0004314"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: malonyl-CoA + [acyl-carrier protein] = CoA + malonyl-[acyl-carrier protein].","definition_xrefs":["EC:2.3.1.39"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-malonyltransferase activity","termid":"GO:0016419"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03972":null,"SJAG_04107":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"[acyl-carrier-protein] S-malonyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-8933547","MetaCyc:MALONYL-COA-ACP-TRANSACYL-RXN"],"synonyms":[{"name":"ACP S-malonyltransferase activity","type":"exact"},{"name":"FabD","type":"related"},{"name":"MAT","type":"related"},{"name":"MCAT activity","type":"related"},{"name":"[acyl-carrier protein] S-malonyltransferase activity","type":"exact"},{"name":"acyl carrier protein malonyltransferase activity","type":"related"},{"name":"acyl carrier proteinmalonyltransferase activity","type":"related"},{"name":"acyl-carrier-protein S-malonyltransferase activity","type":"related"},{"name":"malonyl coenzyme A-acyl carrier protein transacylase activity","type":"related"},{"name":"malonyl transacylase activity","type":"broad"},{"name":"malonyl transferase activity","type":"broad"},{"name":"malonyl-CoA-acyl carrier protein transacylase activity","type":"related"},{"name":"malonyl-CoA:ACP transacylase activity","type":"related"},{"name":"malonyl-CoA:AcpM transacylase activity","type":"related"},{"name":"malonyl-CoA:acyl carrier protein transacylase activity","type":"related"},{"name":"malonyl-CoA:acyl-carrier-protein S-malonyltransferase activity","type":"related"}],"termid":"GO:0004314","terms_by_termid":{"GO:0004314":null}}


id: GO:0102350
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: hexacosanoyl-CoA(4-) + NADP(3-) = trans-2-hexacosenoyl-CoA + NADPH + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete trans-cerot-2-enoyl-CoA reductase activity (obsolete GO:0102350)","termid":"GO:0102350"}


id: FYPO:0002809
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of 6,7-dimethyl-8-ribityllumazine synthase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal 6,7-dimethyl-8-ribityllumazine synthase activity","termid":"FYPO:0002808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000654","FYPO:0000652","FYPO:0000661","FYPO:0001985"],"is_obsolete":false,"name":"decreased 6,7-dimethyl-8-ribityllumazine synthase activity","synonyms":[{"name":"reduced 6,7-dimethyl-8-ribityllumazine synthase activity","type":"exact"}],"termid":"FYPO:0002809"}


id: MONDO:0013755
data:
  {"annotated_genes":["SJAG_00120"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88417],"is_not":false,"summary":null,"term":"MONDO:0013755"}]},"cv_name":"mondo","definition":"Any de Barsy syndrome in which the cause of the disease is a mutation in the PYCR1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"de Barsy syndrome","termid":"MONDO:0017569"},{"relation_name":"is_a","term_name":"inherited cutis laxa","termid":"MONDO:0100237"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00120":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0019303","MONDO:0006025"],"is_obsolete":false,"name":"PYCR1-related de Barsy syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:293633","GARD:17340","DOID:0070138","OMIM:614438","UMLS:C3280799","MEDGEN:482429"],"synonyms":[{"name":"ARCL3B","type":"exact"},{"name":"De Barsy syndrome B","type":"exact"},{"name":"PYCR1 de Barsy syndrome","type":"exact"},{"name":"PYCR1 deficiency","type":"exact"},{"name":"autosomal recessive cutis laxa type IIIB","type":"related"},{"name":"cutis laxa, autosomal recessive, type 3B","type":"related"},{"name":"cutis laxa, autosomal recessive, type IIIB","type":"related"},{"name":"de Barsy syndrome caused by mutation in PYCR1","type":"exact"},{"name":"pyrroline-5-carboxylate reductase 1 deficiency","type":"exact"}],"termid":"MONDO:0013755","terms_by_termid":{"MONDO:0013755":null},"xrefs":{"Monarch":{"xref_id":"0013755"}}}


id: PBO:0049316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase theta 4","termid":"PBO:0049316"}


id: MONDO:0035742
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"coagulation protein disease","termid":"MONDO:0002242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"factor V short isoforms-related bleeding disorder","secondary_identifiers":["GARD:22413","Orphanet:599519","UMLS:C5680279","MEDGEN:1843125"],"synonyms":[{"name":"FV short isoforms-related bleeding disorder","type":"exact"}],"termid":"MONDO:0035742","xrefs":{"Monarch":{"xref_id":"0035742"}}}


id: PBO:0051225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (II)-1-1 (pseudogene)","termid":"PBO:0051225"}


id: PBO:0039700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apoptosis inhibitor 5 pseudogene 1","termid":"PBO:0039700"}


id: MONDO:0015814
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary lymphoma of the skin composed of various numbers of small and large irregular neoplastic follicle center cells. Its morphologic pattern can be nodular, diffuse, or nodular and diffuse. It presents with solitary or grouped plaques and tumors, and it usually involves the scalp, forehead, or trunk. It rarely involves the legs. This type of cutaneous lymphoma tends to remain localized to the skin.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indolent primary cutaneous B-cell lymphoma","termid":"MONDO:0015819"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004992","MONDO:0005093","MONDO:0005570"],"is_obsolete":false,"name":"primary cutaneous follicle center lymphoma","secondary_identifiers":["Orphanet:178540","ICD10CM:C82.6","GARD:13701","MEDGEN:234180","NCIT:C7217","UMLS:C1333171","ONCOTREE:PCFCL","icd11.foundation:77501812","SCTID:404143002","ICDO:9597/3"],"synonyms":[{"name":"Crosti's disease","type":"exact"},{"name":"PCFCL","type":"exact"},{"name":"Reticulohistiocytoma of the dorsum","type":"exact"},{"name":"cutaneous follicle center lymphoma","type":"exact"},{"name":"cutaneous follicle centre lymphoma","type":"exact"}],"termid":"MONDO:0015814","xrefs":{"Monarch":{"xref_id":"0015814"}}}


id: GO:0090219
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the frequency, rate or extent of lipid kinase activity, the catalysis of the transfer of a phosphate group, usually from ATP, to a simple or complex lipid.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of lipid kinase activity (obsolete GO:0090219)","termid":"GO:0090219"}


id: PBO:0064759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPIC antisense RNA 1","termid":"PBO:0064759"}


id: PBO:0042425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 27 pseudogene 9","termid":"PBO:0042425"}


id: FYPO:0006702
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of adenine measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular adenine level","synonyms":[{"name":"decreased cellular adenine level during mitotic cell cycle","type":"related"},{"name":"decreased cellular adenine level during vegetative growth","type":"exact"},{"name":"reduced cellular adenine level","type":"exact"}],"termid":"FYPO:0006702"}


id: PBO:0069712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 992, pseudogene","termid":"PBO:0069712"}


id: GO:0034364
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A lipoprotein particle with a high density (typically 1.063-1.21 g/ml) and a diameter of 5-10 nm that contains APOAs and may contain APOCs and APOE; found in blood and carries lipids from body tissues to the liver as part of the reverse cholesterol transport process.","definition_xrefs":["GOC:expert_pt","GOC:rl","GOC:pde","GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma lipoprotein particle","termid":"GO:0034358"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005576"],"is_obsolete":false,"name":"high-density lipoprotein particle","synonyms":[{"name":"HDL complex","type":"exact"},{"name":"HDL particle","type":"exact"},{"name":"HDL2","type":"related"},{"name":"HDL3","type":"related"},{"name":"high-density lipoprotein class complex","type":"exact"}],"termid":"GO:0034364"}


id: PBO:0043723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6C pseudogene 2","termid":"PBO:0043723"}


id: GO:0030300
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of absorption of cholesterol into the blood, and the exclusion of other sterols from absorption.","definition_xrefs":["PMID:11099417","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intestinal lipid absorption","termid":"GO:1904729"},{"relation_name":"regulates","term_name":"intestinal cholesterol absorption","termid":"GO:0030299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of intestinal cholesterol absorption","termid":"GO:0030300"}


id: FYECO:0000116
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Any experimental condition that includes heat shock, i.e. a step in which cells or samples are briefly exposed to a very high temperature.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping sequential growth conditions","termid":"FYECO:0000094"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grouping heat shock","termid":"FYECO:0000116"}


id: GO:0046400
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving keto-3-deoxy-D-manno-octulosonic acid, an acidic sugar present in lipopolysaccharides of the outer membranes of some Gram-negative bacteria.","definition_xrefs":["ISBN:0198506732","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide metabolic process","termid":"GO:0005996"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"keto-3-deoxy-D-manno-octulosonic acid metabolic process","synonyms":[{"name":"KDO metabolic process","type":"exact"},{"name":"KDO metabolism","type":"exact"},{"name":"keto-3-deoxy-D-manno-octulosonic acid metabolism","type":"exact"},{"name":"ketodeoxyoctanoate metabolic process","type":"related"}],"termid":"GO:0046400"}


id: PBO:0087642
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the GINS complex (Sld5p, Psf1p, Psf2p, Psf3p); complex is localized to DNA replication origins and implicated in assembly of the DNA replication machinery","termid":"PBO:0087642"}


id: PBO:0000393
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.1","termid":"PBO:0000393"}


id: GO:0046630
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a gamma-delta T cell population by cell division.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell proliferation","termid":"GO:0042098"},{"relation_name":"is_a","term_name":"gamma-delta T cell activation","termid":"GO:0046629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gamma-delta T cell proliferation","synonyms":[{"name":"gamma-delta T lymphocyte proliferation","type":"exact"},{"name":"gamma-delta T-cell proliferation","type":"exact"},{"name":"gamma-delta T-lymphocyte proliferation","type":"exact"}],"termid":"GO:0046630"}


id: GO:0000833
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 5-diphospho-1D-myo-inositol (1,2,3,4,6)pentakisphosphate = ADP + 4,5-bis(diphospho)-1D-myo-inositol (1,2,3,6)tetrakisphosphate.","definition_xrefs":["GOC:elh","PMID:16429326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diphosphoinositol pentakisphosphate kinase activity","termid":"GO:0000829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016301","GO:0003674"],"is_obsolete":false,"name":"5-diphosphoinositol pentakisphosphate 4-kinase activity","synonyms":[{"name":"IP7 4-kinase activity","type":"exact"},{"name":"diphosphoinositol-pentakisphosphate 4-kinase activity","type":"broad"},{"name":"inositol heptakisphosphate 4-kinase activity","type":"broad"}],"termid":"GO:0000833"}


id: GO:0051668
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id: MONDO:0019590
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare endocrine growth disease (obsolete MONDO:0019590)","secondary_identifiers":["Orphanet:90692"],"termid":"MONDO:0019590","xrefs":{"Monarch":{"xref_id":"0019590"}}}


id: GO:0043730
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-ureido-4-imidazole carboxylate + H2O = 5-amino-4-imidazole carboxylate + NH3 + CO2.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016810","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"5-ureido-4-imidazole carboxylate hydrolase activity","termid":"GO:0043730"}


id: MONDO:0018082
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aorto-ventricular tunnel is a congenital, extracardiac channel which connects the ascending aorta above the sinotubular junction to the cavity of the left, or (less commonly) right ventricle.","definition_xrefs":["Orphanet:3400"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital anomaly of the great arteries","termid":"MONDO:0020292"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aorto-ventricular tunnel","secondary_identifiers":["MESH:D000082903","MEDGEN:868852","HP:0011627","GARD:18798","UMLS:C4023262"],"synonyms":[{"name":"aorto-ventricular tunnel","type":"exact"},{"name":"aorto-ventricular tunnel (disease)","type":"exact"}],"termid":"MONDO:0018082","xrefs":{"Monarch":{"xref_id":"0018082"}}}


id: MONDO:0004333
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant, ectopic ACTH secreting pancreatic neuroendocrine tumor, associated with Cushing's syndrome. The prognosis is usually poor.","definition_xrefs":["NCIT:C27466"],"direct_ancestors":[{"relation_name":"is_a","term_name":"functional pancreatic neuroendocrine tumor","termid":"MONDO:0023206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"pancreatic ACTH-producing neuroendocrine tumor","secondary_identifiers":["UMLS:C1335300","DOID:7697","ICDO:8158/1","MEDGEN:233302"],"synonyms":[{"name":"pancreatic ACTH hormone producing tumor","type":"related"},{"name":"pancreatic ACTH hormone producing tumour","type":"related"},{"name":"pancreatic ACTH producing NET","type":"exact"},{"name":"pancreatic ACTH producing neuroendocrine tumor","type":"exact"},{"name":"pancreatic ACTH producing neuroendocrine tumour","type":"exact"},{"name":"pancreatic ACTH producing tumor","type":"exact"},{"name":"pancreatic ACTH producing tumour","type":"exact"},{"name":"pancreatic ACTH-producing neuroendocrine tumor","type":"exact"},{"name":"pancreatic adrenocorticotropic hormone producing tumor","type":"exact"},{"name":"pancreatic adrenocorticotropic hormone producing tumour","type":"exact"}],"termid":"MONDO:0004333","xrefs":{"Monarch":{"xref_id":"0004333"}}}


id: FYPO:0007809
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the amount, distribution, and morphology of cytoplasmic microtubules is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component","termid":"FYPO:0001233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal cytoplasmic microtubules","synonyms":[{"name":"normal cytoplasmic microtubule morphology","type":"exact"},{"name":"normal cytoplasmic microtubule structure","type":"narrow"}],"termid":"FYPO:0007809"}


id: MONDO:0003783
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Reduction in the number of lymphocytes.","definition_xrefs":["MESH:D008231"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukopenia","termid":"MONDO:0003785"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"lymphopenia","secondary_identifiers":["ICD10CM:D72.810","MEDGEN:7418","ICD9:288.8","HP:0001888","ICD9:288.51","SCTID:48813009","UMLS:C0024312","icd11.foundation:298296736","DOID:614"],"synonyms":[{"name":"lymphopenia","type":"exact"},{"name":"lymphopenia (disease)","type":"exact"},{"name":"lymphocytopenia","type":"exact"}],"termid":"MONDO:0003783","xrefs":{"Monarch":{"xref_id":"0003783"}}}


id: GO:0080054
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of nitrate ions (NO3-) from one side of a membrane to the other. In low-affinity transport the transporter is able to bind the solute only if it is present at very high concentrations.","definition_xrefs":["PMID:19050168"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrate transmembrane transporter activity","termid":"GO:0015112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"low-affinity nitrate transmembrane transporter activity","synonyms":[{"name":"low affinity nitrate transmembrane transporter activity","type":"exact"}],"termid":"GO:0080054"}


id: PBO:0091598
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Caffeine-Induced cell Death","termid":"PBO:0091598"}


id: GO:0047759
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: butanal + CoA + NAD(P)+ = butanoyl-CoA + NAD(P)H + H+.","definition_xrefs":["MetaCyc:BUTANAL-DEHYDROGENASE-RXN","EC:1.2.1.57"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase [NAD(P)+] activity","termid":"GO:0004030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"butanal dehydrogenase [NAD(P)+] activity","synonyms":[{"name":"butanal dehydrogenase activity","type":"exact"},{"name":"butanal:NAD(P)+ oxidoreductase (CoA-acylating)","type":"related"}],"termid":"GO:0047759"}


id: GO:0140549
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The membrane surrounding the spore core (endospore core) that separates it from its external environment.","definition_xrefs":["PMID:23202530"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane","termid":"GO:0016020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"spore inner membrane","synonyms":[{"name":"spore membrane","type":"broad"}],"termid":"GO:0140549"}


id: SO:0001818
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence_variant which is predicted to change the protein encoded in the coding sequence.","definition_xrefs":["EBI:gr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coding_sequence_variant","termid":"SO:0001580"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein_altering_variant","secondary_identifiers":["http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences"],"synonyms":[{"name":"VEP:protein_altering_variant","type":"exact"},{"name":"protein altering variant","type":"exact"}],"termid":"SO:0001818"}


id: GO:0102536
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2S)-sakuranetin + O2 + reduced [NADPH--hemoprotein reductase] = (2S)-7-methylcarthamidin + H(+) + H2O + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:73431","PMID:23184958"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"sakuranetin 6-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-14754"],"termid":"GO:0102536"}


id: MONDO:0008817
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive genetic disorder caused by mutations in the ENPP1 gene, encoding ectonucleotide pyrophosphatase/phosphodiesterase family member 1. The condition is characterized by calcification and narrowing of medium- and large-sized arteries, resulting in cardiovascular complications.","definition_xrefs":["NCIT:C128805"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arterial calcification of infancy","termid":"MONDO:0018870"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arterial calcification, generalized, of infancy, 1","secondary_identifiers":["UMLS:C4551985","MEDGEN:1631685","OMIM:208000"],"synonyms":[{"name":"ENPP1 arterial calcification of infancy","type":"exact"},{"name":"GACI1","type":"related"},{"name":"Gaci","type":"related"},{"name":"arterial calcification of infancy caused by mutation in ENPP1","type":"exact"},{"name":"arterial calcification, generalized, of infancy, 1","type":"exact"},{"name":"arterial calcification, generalized, of infancy, type 1","type":"exact"},{"name":"arterial calcification, idiopathic infantile","type":"related"},{"name":"arteriopathy, occlusive infantile","type":"related"},{"name":"coronary sclerosis, medial, of infancy","type":"related"},{"name":"generalised arterial calcification of infancy 1","type":"exact"},{"name":"generalized arterial calcification of infancy 1","type":"exact"},{"name":"idiopathic infantile arterial calcification","type":"related"}],"termid":"MONDO:0008817","xrefs":{"Monarch":{"xref_id":"0008817"}}}


id: MONDO:0017404
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal Xq28 microduplication syndrome is a rare, hereditary, syndromic intellectual disability characterized by cognitive impairment, behavioral and psychiatric problems, recurrent infections, atopic diseases, and distinctive facial features in males. Females are clinically asymptomatic or mildly affected, presenting mild learning difficulties and facial dysmorphism.","definition_xrefs":["Orphanet:293939"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"chromosome Xq28 duplication syndrome","termid":"MONDO:0010436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"distal Xq28 microduplication syndrome","secondary_identifiers":["GARD:17350","MEDGEN:1655645","DECIPHER:88","UMLS:C4751127"],"synonyms":[{"name":"Xq28 Microduplication","type":"exact"},{"name":"distal dup(X)q(28)","type":"exact"},{"name":"distal trisomy Xq28","type":"exact"}],"termid":"MONDO:0017404","xrefs":{"Monarch":{"xref_id":"0017404"}}}


id: GO:0046888
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of a hormone from a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell communication","termid":"GO:0010648"},{"relation_name":"is_a","term_name":"negative regulation of signaling","termid":"GO:0023057"},{"relation_name":"is_a","term_name":"regulation of hormone secretion","termid":"GO:0046883"},{"relation_name":"is_a","term_name":"negative regulation of secretion by cell","termid":"GO:1903531"},{"relation_name":"negatively_regulates","term_name":"hormone secretion","termid":"GO:0046879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"negative regulation of hormone secretion","synonyms":[{"name":"down regulation of hormone secretion","type":"exact"},{"name":"down-regulation of hormone secretion","type":"exact"},{"name":"downregulation of hormone secretion","type":"exact"},{"name":"inhibition of hormone secretion","type":"narrow"}],"termid":"GO:0046888"}


id: PBO:0060230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYADM antisense RNA 2","termid":"PBO:0060230"}


id: GO:0030777
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-scoulerine + S-adenosyl-L-methionine(1+) = (S)-tetrahydrocolumbamine + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["RHEA:23808","EC:2.1.1.117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"(S)-scoulerine 9-O-methyltransferase activity","secondary_identifiers":["MetaCyc:2.1.1.117-RXN","KEGG_REACTION:R03835"],"synonyms":[{"name":"S-adenosyl-L-methionine:(S)-scoclaurine 9-O-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:(S)-scoulerine 9-O-methyltransferase activity","type":"related"}],"termid":"GO:0030777"}


id: PBO:0029326
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H2A_phosphorylation_at_mating_type_locus_during_mitotic_S_phase","termid":"PBO:0029326"}


id: MONDO:1012708
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinal disorder characterized by multiple areas of retinal degeneration that occurs in dogs due to a G(482)A missense mutation in the BEST1 gene.","definition_xrefs":["PMID:17460247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal degeneration, non-human animal","termid":"MONDO:1010326"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multifocal retinopathy 2, BEST1-related, dog","secondary_identifiers":["OMIA:001553-9615"],"synonyms":[{"name":"CMR2","type":"exact"},{"name":"multifocal retinopathy 2, dog","type":"related"}],"termid":"MONDO:1012708","xrefs":{"Monarch":{"xref_id":"1012708"}}}


id: GO:0042501
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of introducing a phosphate group to a serine residue of a STAT (Signal Transducer and Activator of Transcription) protein.","definition_xrefs":["GOC:jl","PMID:10918594"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-serine phosphorylation","termid":"GO:0018105"},{"relation_name":"part_of","term_name":"regulation of receptor signaling pathway via JAK-STAT","termid":"GO:0046425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"serine phosphorylation of STAT protein","secondary_identifiers":["GO:0033136"],"synonyms":[{"name":"serine phosphorylation of STAT3 protein","type":"narrow"}],"termid":"GO:0042501"}


id: PATO:0000228
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000228 auditory (obsolete PATO:0000228)","termid":"PATO:0000228"}


id: MONDO:0018058
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tracheal agenesis (TA) is a rare congenital malformation in which the trachea may be completely absent (agenesis), or partially in place but underdeveloped (atresia). In both cases, proximal-distal communication between the larynx and the alveoli of the lungs is lacking.","definition_xrefs":["Orphanet:3346"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"},{"relation_name":"is_a","term_name":"otorhinolaryngologic disease","termid":"MONDO:0024623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tracheal agenesis","secondary_identifiers":["SCTID:3987009","GARD:5233","UMLS:C1261567","MEDGEN:266059","MESH:C536975","NCIT:C35376"],"synonyms":[{"name":"congenital absence of trachea","type":"exact"},{"name":"congenital tracheal agenesis","type":"related"},{"name":"tracheal absence","type":"exact"}],"termid":"MONDO:0018058","xrefs":{"Monarch":{"xref_id":"0018058"}}}


id: PBO:0002927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial intermembrane space protein sorting protein (predicted)","termid":"PBO:0002927"}


id: MONDO:0030523
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited oocyte maturation defect","termid":"MONDO:0014769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"oocyte maturation defect 12","secondary_identifiers":["OMIM:619697","UMLS:C5562063","MEDGEN:1794273"],"synonyms":[{"name":"OOMD12","type":"exact"}],"termid":"MONDO:0030523","xrefs":{"Monarch":{"xref_id":"0030523"}}}


id: MONDO:0019606
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Simple (monoclonal) cryoglobulinemia or type I cryoglobulinemia refers to the presence in the serum of one isotype or subclass of immunoglobulin (Ig) that precipitates reversibly below 37°C.","definition_xrefs":["Orphanet:91139"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acquired peripheral neuropathy","termid":"MONDO:0015923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"simple cryoglobulinemia","secondary_identifiers":["MEDGEN:1383731","ICD10CM:D89.1","UMLS:C4510006","SCTID:723674005"],"synonyms":[{"name":"cryoglobulinemia type 1","type":"exact"}],"termid":"MONDO:0019606","xrefs":{"Monarch":{"xref_id":"0019606"}}}


id: PBO:0059439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane spanning 4-domains A8","termid":"PBO:0059439"}


id: PBO:0041080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRICK1 pseudogene 1","termid":"PBO:0041080"}


id: GO:0061750
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + sphingomyelin = ceramide + choline phosphate + H+ in an acidic environment.","definition_xrefs":["GOC:dph","PMID:26493087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphingomyelin phosphodiesterase activity","termid":"GO:0004767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"acid sphingomyelin phosphodiesterase activity","synonyms":[{"name":"acid SMase","type":"related"},{"name":"acid sphingomyelinase","type":"exact"}],"termid":"GO:0061750"}


id: PR:O13911
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A bifunctional polynucleotide phosphatase/kinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00882","PANTHER:PTHR12083:SF5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bifunctional polynucleotide phosphatase/kinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C11.04c","secondary_identifiers":["UniProtKB:O13911"],"synonyms":[{"name":"DNA 5'-kinase/3'-phosphatase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PNKP","type":"exact"},{"name":"polynucleotide kinase-3'-phosphatase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13911"}


id: MONDO:0032696
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited oocyte maturation defect","termid":"MONDO:0014769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"oocyte maturation defect 6","secondary_identifiers":["OMIM:618353","MEDGEN:1682649","UMLS:C5193047"],"synonyms":[{"name":"OOCYTE MATURATION DEFECT 6","type":"related"},{"name":"OOMD6","type":"related"}],"termid":"MONDO:0032696","xrefs":{"Monarch":{"xref_id":"0032696"}}}


id: PBO:0088168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD-repeat protein involved in ubiquitin-mediated protein degradation; Ub-binding protein with a role in Ub homeostasis; substrate-recruiting adaptor for Cdc48p in mitochondria-associated degradation; inhibits degradation of Ufd2p-dependent substrates; facilitates proteolysis of Cse4p, a centromeric H3-like protein; required for ribophagy; promotes NHEJ in postdiauxic/stationary phase; protein increases in abundance and relocalizes from nucleus to nuclear periphery upon DNA replication stress","termid":"PBO:0088168"}


id: PBO:0034257
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-directly_activates","termid":"PBO:0034257"}


id: GO:0061300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the vasculature of the cerebellum over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasculature development","termid":"GO:0001944"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellum vasculature development","termid":"GO:0061300"}


id: GO:0045794
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases cell volume.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell volume homeostasis","termid":"GO:0006884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell volume","synonyms":[{"name":"RVD","type":"related"},{"name":"cell regulatory volume decrease","type":"related"}],"termid":"GO:0045794"}


id: GO:0003693
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a P-element, a class of Drosophila transposon responsible for hybrid dysgenesis.","definition_xrefs":["PMID:9440262","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence-specific double-stranded DNA binding","termid":"GO:1990837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0003677","GO:0005488"],"is_obsolete":false,"name":"P-element binding","termid":"GO:0003693"}


id: GO:0097603
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an ion by a channel that opens in response to a temperature stimulus (e.g. exposure to a temperature range different than the optimal temperature for that organism).","definition_xrefs":["GOC:ha","PMID:23027824","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic ion channel activity","termid":"GO:0005216"},{"relation_name":"is_a","term_name":"gated channel activity","termid":"GO:0022836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"temperature-gated ion channel activity","synonyms":[{"name":"heat-activated ion channel activity","type":"narrow"},{"name":"temperature gated ion channel activity","type":"exact"},{"name":"temperature-activated ion channel activity","type":"exact"},{"name":"temperature-dependent ion channel activity","type":"exact"}],"termid":"GO:0097603"}


id: PBO:0041783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcyphosine 2","termid":"PBO:0041783"}


id: PBO:0064733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 69","termid":"PBO:0064733"}


id: PBO:0062158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily H member 6 pseudogene","termid":"PBO:0062158"}


id: GO:0001931
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane projection with related cytoskeletal components at the trailing edge of a cell in the process of migrating or being activated, found on the opposite side of the cell from the leading edge or immunological synapse, respectively.","definition_xrefs":["PMID:12714569","PMID:12787750","GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection","termid":"GO:0120025"},{"relation_name":"part_of","term_name":"cell trailing edge","termid":"GO:0031254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"uropod","synonyms":[{"name":"distal pole complex","type":"related"},{"name":"retractile pole","type":"related"},{"name":"uropodium","type":"exact"}],"termid":"GO:0001931"}


id: PBO:0067136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 184, pseudogene","termid":"PBO:0067136"}


id: GO:0010069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The division of the zygote in a plane perpendicular to the long axis of the embryo sac to produce a larger basal cell near the micropyle and a small terminal cell close to what was the central cell and is now the developing endosperm. An example of this process is found in Arabidopsis thaliana.","definition_xrefs":["ISBN:0865427429","GOC:mtg_sensu","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cytokinesis","termid":"GO:0000281"},{"relation_name":"is_a","term_name":"zygote asymmetric cell division","termid":"GO:0010070"},{"relation_name":"part_of","term_name":"embryo development ending in seed dormancy","termid":"GO:0009793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0000281"}],"interesting_parent_ids":["GO:0007049","GO:0000281","GO:0008150"],"is_obsolete":false,"name":"zygote asymmetric cytokinesis in embryo sac","termid":"GO:0010069"}


id: PBO:0051141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-19 (pseudogene)","termid":"PBO:0051141"}


id: GO:0061159
data:
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id: GO:0021736
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id: GO:0009840
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id: GO:0048907
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id: GO:0032323
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id: GO:1902485
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id: PBO:0110419
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id: GO:0017075
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id: GO:0015336
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id: MONDO:0014971
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"amelogenesis imperfecta type 2","termid":"MONDO:0015048"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amelogenesis imperfecta, hypomaturation type, IIa6","secondary_identifiers":["GARD:16211","DOID:0080960","OMIM:617217","MEDGEN:934632","UMLS:C4310665"],"synonyms":[{"name":"AI2A6","type":"exact"},{"name":"amelogenesis imperfecta, hypomaturation type, IIa6","type":"exact"},{"name":"amelogenesis imperfecta, hypomaturation type, IIa6; AI2A6","type":"exact"}],"termid":"MONDO:0014971","xrefs":{"Monarch":{"xref_id":"0014971"}}}


id: FYPO:0004420
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which the phosphorylation of serine residues in one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete increased protein serine phosphorylation (obsolete FYPO:0004420)","synonyms":[{"name":"increased peptidyl-serine phosphorylation","type":"exact"},{"name":"increased serine phosphorylation","type":"exact"}],"termid":"FYPO:0004420"}


id: GO:0001837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transition where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell.","definition_xrefs":["GOC:dph","PMID:14701881"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal cell differentiation","termid":"GO:0048762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial to mesenchymal transition","secondary_identifiers":["Reactome:R-HSA-9758919"],"synonyms":[{"name":"EMT","type":"exact"},{"name":"epithelial-mesenchymal transition","type":"exact"},{"name":"mesenchymal cell differentiation from epithelial cell","type":"exact"}],"termid":"GO:0001837"}


id: PBO:0036246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy/CVT pathway ENTH/VHS domain protein Irs4 (predicted)","termid":"PBO:0036246"}


id: MONDO:1011740
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary seborrhea-oleosa, non-human animal","secondary_identifiers":["OMIA:000822"],"termid":"MONDO:1011740","xrefs":{"Monarch":{"xref_id":"1011740"}}}


id: MONDO:0016465
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete multiple intestinal atresia (obsolete MONDO:0016465)","termid":"MONDO:0016465","xrefs":{"Monarch":{"xref_id":"0016465"}}}


id: GO:0032920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of putrescine by addition of acetyl groups.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"putrescine metabolic process","termid":"GO:0009445"},{"relation_name":"is_a","term_name":"polyamine acetylation","termid":"GO:0032917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"putrescine acetylation","termid":"GO:0032920"}


id: GO:0047397
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dolichyl beta-D-glucosyl phosphate + H2O = dolichol-phosphate + beta-D-glucose.","definition_xrefs":["MetaCyc:3.1.4.48-RXN","EC:3.1.4.48"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"dolichylphosphate-glucose phosphodiesterase activity","secondary_identifiers":["RHEA:13857"],"synonyms":[{"name":"Dol-P-Glc phosphodiesterase activity","type":"related"},{"name":"dolichol phosphoglucose phosphodiesterase activity","type":"related"},{"name":"dolichyl-beta-D-glucosyl-phosphate dolichylphosphohydrolase activity","type":"related"},{"name":"dolichyl-phosphate-glucose phosphodiesterase activity","type":"exact"}],"termid":"GO:0047397"}


id: PBO:0089102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S15a","termid":"PBO:0089102"}


id: PBO:0000047
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"evidence","termid":"PBO:0000047"}


id: MONDO:1010669
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Myeloperoxidase deficiency that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloperoxidase deficiency, non-human animal","termid":"MONDO:1010086"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myeloperoxidase deficiency, dog","secondary_identifiers":["OMIA:002028-9615"],"termid":"MONDO:1010669","xrefs":{"Monarch":{"xref_id":"1010669"}}}


id: PBO:0054574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1976","termid":"PBO:0054574"}


id: GO:0034179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of toll-like receptor 13 signaling pathway.","definition_xrefs":["PMID:16551253","PMID:17328678","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039531"},{"relation_name":"regulates","term_name":"toll-like receptor 13 signaling pathway","termid":"GO:0034178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of toll-like receptor 13 signaling pathway","synonyms":[{"name":"regulation of TLR13 signaling pathway","type":"exact"},{"name":"regulation of toll-like receptor 13 signalling pathway","type":"exact"}],"termid":"GO:0034179"}


id: MONDO:0017207
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoma","termid":"MONDO:0005062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"primary organ-specific lymphoma","secondary_identifiers":["GARD:21064","MEDGEN:1826175","Orphanet:279911","NCIT:C7185","UMLS:C5680788"],"termid":"MONDO:0017207","xrefs":{"Monarch":{"xref_id":"0017207"}}}


id: PBO:0063126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(ADP-ribose) polymerase family member 11","termid":"PBO:0063126"}


id: MONDO:0007038
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Achoo syndrome","secondary_identifiers":["MESH:C535300","MEDGEN:400287","UMLS:C1863416","OMIM:100820"],"synonyms":[{"name":"Achoo syndrome","type":"exact"},{"name":"Peroutka sneeze","type":"related"},{"name":"autosomal dominant compelling Helioophthalmic outburst syndrome","type":"related"},{"name":"autosomal dominant compelling helio ophthalmic outburst syndrome","type":"related"},{"name":"photic sneeze reflex","type":"related"},{"name":"sneezing from Light exposure","type":"related"}],"termid":"MONDO:0007038","xrefs":{"Monarch":{"xref_id":"0007038"}}}


id: MONDO:0017831
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mild Canavan disease (CD) is a neurodegenerative disorder characterized by mild speech delay or motor development.","definition_xrefs":["Orphanet:314918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Canavan disease","termid":"MONDO:0010079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005066"],"is_obsolete":false,"name":"mild Canavan disease","secondary_identifiers":["MEDGEN:865564","UMLS:C4017127","GARD:17438"],"synonyms":[{"name":"juvenile Canavan disease","type":"exact"}],"termid":"MONDO:0017831","xrefs":{"Monarch":{"xref_id":"0017831"}}}


id: MONDO:0014985
data:
  {"annotated_genes":["SJAG_00611"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88810],"is_not":false,"summary":null,"term":"MONDO:0014985"}]},"cv_name":"mondo","definition":"Any Fanconi anemia in which the cause of the disease is a mutation in the MAD2L2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fanconi anemia","termid":"MONDO:0019391"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00611":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0021190"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570","MONDO:0005046","MONDO:0005066","MONDO:0021190"],"is_obsolete":false,"name":"Fanconi anemia complementation group V","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111080","OMIM:617243","GARD:16213","MEDGEN:934619","UMLS:C4310652"],"synonyms":[{"name":"FANCV","type":"exact"},{"name":"Fanconi Anemia, complementation Group 5","type":"related"},{"name":"Fanconi Anemia, complementation group V","type":"exact"},{"name":"Fanconi Anemia, complementation group type V","type":"exact"},{"name":"Fanconi anaemia caused by mutation in MAD2L2","type":"exact"},{"name":"Fanconi anaemia complementation group type V","type":"exact"},{"name":"Fanconi anemia caused by mutation in MAD2L2","type":"exact"},{"name":"Fanconi anemia complementation group type V","type":"exact"},{"name":"Fanconi anemia, complementation GROUP V","type":"related"},{"name":"MAD2L2 Fanconi anaemia","type":"exact"},{"name":"MAD2L2 Fanconi anemia","type":"exact"}],"termid":"MONDO:0014985","terms_by_termid":{"MONDO:0014985":null},"xrefs":{"Monarch":{"xref_id":"0014985"}}}


id: PBO:0085732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in the synthesis of GlcNAc-PI; GlcNAc-PI is the first intermediate in the synthesis of glycosylphosphatidylinositol (GPI) anchors; homologous to the human PIG-H protein; GlcNAc-PI stands for N-acetylglucosaminyl phosphatidylinositol","termid":"PBO:0085732"}


id: MONDO:0019967
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Kienbock disease is a rare bone disorder of unknown etiology characterized clinically by osteonecrosis of the carpal lunate, eventually leading to collapse of the lunate bone impacting wrist function.","definition_xrefs":["Orphanet:97332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrosis","termid":"MONDO:0018381"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kienbock disease","secondary_identifiers":["GARD:9690","UMLS:C0022682","MedDRA:10064242","MEDGEN:44028","NORD:1332"],"synonyms":[{"name":"Kienbock's disease","type":"related"},{"name":"Kienböck Disease","type":"exact"},{"name":"Lunatomalacia","type":"exact"},{"name":"Osteochondrosis of the lunate bone","type":"exact"},{"name":"aseptic necrosis of the lunate bone","type":"exact"},{"name":"bilateral Kienbock's disease","type":"related"},{"name":"osteochondritis of the lunate bone","type":"exact"}],"termid":"MONDO:0019967","xrefs":{"Monarch":{"xref_id":"0019967"}}}


id: GO:0008015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The flow of blood through the body of an animal, enabling the transport of nutrients to the tissues and the removal of waste products.","definition_xrefs":["GOC:mtg_heart","ISBN:0192800825"],"direct_ancestors":[{"relation_name":"is_a","term_name":"circulatory system process","termid":"GO:0003013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"blood circulation","secondary_identifiers":["GO:0070261"],"synonyms":[{"name":"hemolymph circulation","type":"related"}],"termid":"GO:0008015"}


id: PBO:0083027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deleted ORF; does not encode a protein; this ORF was removed when a sequence update created a stop codon after residue 45","termid":"PBO:0083027"}


id: MOD:00544
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a residue containing common isotopes to a 6x(13)C labeled residue.","definition_xrefs":["PubMed:12716131","Unimod:188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(13)C labeled residue","termid":"MOD:00842"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6x(13)C labeled residue","synonyms":[{"name":"13C(6) Silac label","type":"related"},{"name":"Label:13C(6)","type":"related"}],"termid":"MOD:00544"}


id: FYPO:0004267
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which primary cell septum disassembly is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal septum disassembly","synonyms":[{"name":"normal septum disassembly during mitotic cell cycle","type":"related"},{"name":"normal septum disassembly during vegetative growth","type":"exact"}],"termid":"FYPO:0004267"}


id: FYPO:0007173
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of mitotic checkpoint complex binding by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah","PMID:28366744"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein-protein interaction","termid":"FYPO:0001645"},{"relation_name":"is_a","term_name":"abnormal protein complex binding","termid":"FYPO:0003591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0001985","FYPO:0000702"],"is_obsolete":false,"name":"decreased mitotic checkpoint complex binding","synonyms":[{"name":"decreased MCC binding","type":"exact"},{"name":"reduced mitotic checkpoint complex binding","type":"exact"}],"termid":"FYPO:0007173"}


id: PBO:0059422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosome recycling factor pseudogene 1","termid":"PBO:0059422"}


id: PBO:0089259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdc42 GTPase complex scaffold subunit Scd2","termid":"PBO:0089259"}


id: GO:1905279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of retrograde transport, endosome to Golgi.","definition_xrefs":["GOC:PARL","PMID:23395371","GO_REF:0000058","GOC:TermGenie","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular transport","termid":"GO:0032386"},{"relation_name":"is_a","term_name":"regulation of vesicle-mediated transport","termid":"GO:0060627"},{"relation_name":"regulates","term_name":"retrograde transport, endosome to Golgi","termid":"GO:0042147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"regulation of retrograde transport, endosome to Golgi","synonyms":[{"name":"regulation of retrograde (endosome to Golgi) transport","type":"exact"}],"termid":"GO:1905279"}


id: PBO:0038928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor L2","termid":"PBO:0038928"}


id: PBO:0052680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 48","termid":"PBO:0052680"}


id: GO:0046121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of any one of a family of organic molecules consisting of a purine or pyrimidine base covalently bonded to a sugar deoxyribose (a deoxyribonucleoside).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyribonucleoside metabolic process","termid":"GO:0009120"},{"relation_name":"is_a","term_name":"nucleoside catabolic process","termid":"GO:0009164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"deoxyribonucleoside catabolic process","synonyms":[{"name":"deoxyribonucleoside breakdown","type":"exact"},{"name":"deoxyribonucleoside catabolism","type":"exact"},{"name":"deoxyribonucleoside degradation","type":"exact"}],"termid":"GO:0046121"}


id: GO:0075273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of zygosporangium development, a process in which a fruiting body called zygosporangium is formed.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of spore-bearing organ development","termid":"GO:0075261"},{"relation_name":"is_a","term_name":"regulation of zygosporangium development","termid":"GO:0075272"},{"relation_name":"positively_regulates","term_name":"zygosporangium development","termid":"GO:0075271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of zygosporangium development","termid":"GO:0075273"}


id: PBO:0035981
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_methyltransferase_activity_(H3-K9_specific)_activity","termid":"PBO:0035981"}


id: MONDO:0000426
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