# terms

id: GO:0043395
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a heparan sulfate proteoglycan, any proteoglycan containing heparan sulfate as the glycosaminoglycan carbohydrate unit.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteoglycan binding","termid":"GO:0043394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"heparan sulfate proteoglycan binding","synonyms":[{"name":"heparin proteoglycan binding","type":"related"}],"termid":"GO:0043395"}


id: PBO:0067223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 292, pseudogene","termid":"PBO:0067223"}


id: GO:1990202
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex capable of FMN reductase activity. Reduces FMN to FMNH2 in a NAD(P)H-dependent manner. In E.coli, consists of a SsuE dimer.","definition_xrefs":["GOC:bhm","PMID:16997955","PMID:10480865"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737","GO:0005829"],"is_obsolete":false,"name":"FMN reductase complex","synonyms":[{"name":"FMN oxidoreductase complex, NAD(P)H-dependent","type":"related"},{"name":"FMN reductase complex, NAD(P)H-dependent","type":"exact"},{"name":"SsuE complex","type":"narrow"},{"name":"flavin oxidoreductase complex, NAD(P)H-dependent","type":"broad"}],"termid":"GO:1990202"}


id: PBO:0079703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBOX5 antisense RNA 1","termid":"PBO:0079703"}


id: PR:O60128
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 40S ribosomal protein S3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04047","PANTHER:PTHR11760:SF9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16G5.14c","secondary_identifiers":["UniProtKB:O60128"],"synonyms":[{"name":"Spom972h-RPS3","type":"exact"}],"termid":"PR:O60128"}


id: MONDO:0000019
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ectodermal dysplasia (obsolete MONDO:0000019)","termid":"MONDO:0000019","xrefs":{"Monarch":{"xref_id":"0000019"}}}


id: PBO:0087888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional repressor involved in regulating multidrug resistance; negatively regulates expression of the PDR5 gene; member of the Gal4p family of zinc cluster proteins","termid":"PBO:0087888"}


id: PBO:0043533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"component of oligomeric golgi complex 1","termid":"PBO:0043533"}


id: PBO:0081199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger with KRAB and SCAN domains 1","termid":"PBO:0081199"}


id: PBO:0063013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAGE family member 2","termid":"PBO:0063013"}


id: GO:0033445
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes an AGU codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0005488","GO:0003723","GO:0060090","GO:0003674"],"is_obsolete":false,"name":"AGU codon-amino acid adaptor activity","synonyms":[{"name":"AGT codon-amino acid adaptor activity","type":"exact"},{"name":"serine tRNA","type":"related"}],"termid":"GO:0033445"}


id: GO:0002196
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of misacylated Ser-tRNA(Ala).","definition_xrefs":["GOC:hjd","PMID:21285375"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA deacylase activity","termid":"GO:0002161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140101"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0140098","GO:0140101"],"is_obsolete":false,"name":"Ser-tRNA(Ala) deacylase activity","termid":"GO:0002196"}


id: PBO:0000142
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.3.11","termid":"PBO:0000142"}


id: FYPO:0003933
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of an exonucleolytic RNA catabolic process that proceeds in the 5' to 3' direction to degrade mRNA encoded in the nucleus is decreased.","definition_xrefs":["PomBase:mah","GO:0034428"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolism phenotype during vegetative growth","termid":"FYPO:0001348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased nuclear 5'-3' exonucleolytic mRNA catabolic process","synonyms":[{"name":"decreased 5'-3' exonucleolytic nuclear-transcribed mRNA catabolic process","type":"exact"},{"name":"decreased nuclear 5'-3' exonucleolytic mRNA catabolic process during mitotic cell cycle","type":"related"},{"name":"decreased nuclear 5'-3' exonucleolytic mRNA catabolic process during vegetative growth","type":"exact"},{"name":"decreased nuclear-transcribed mRNA catabolic process, exonucleolytic, 5'-3'","type":"exact"},{"name":"reduced nuclear 5'-3' exonucleolytic mRNA catabolic process","type":"exact"}],"termid":"FYPO:0003933"}


id: MONDO:0014253
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A rare, primary immunodeficiency. It is caused by a currently undetermined defect in the Fas-induced apoptosis pathway. No mutations in Fas, FASLG or CASP10 are detectable. Disruption of Fas-induced apoptosis impairs lymphocyte homeostasis and immune tolerance. Characteristic laboratory findings include an increase in circulating, double-negative (CD4-/CD8-) T cells in the setting of immune-mediated anemia, thrombocytopenia and neutropenia. Clinical signs present in childhood include fatigue, pallor, bruising, hepatosplenomegaly and chronic, non-malignant, non-infectious lymphadenopathy. The clinical course is influenced by a strong association with other autoimmune disorders and an increased risk for developing Hodgkin and non-Hodgkin lymphoma.","definition_xrefs":["NCIT:C39577"],"gene_count":0,"genotype_count":0,"name":"obsolete autoimmune lymphoproliferative syndrome type 3 (obsolete MONDO:0014253)","secondary_identifiers":["NANDO:2200743"],"synonyms":[{"name":"ALPS-U","type":"exact"},{"name":"ALPS3","type":"exact"},{"name":"CVID9","type":"exact"},{"name":"PRKCD autoimmune lymphoproliferative syndrome","type":"exact"},{"name":"autoimmune lymphoproliferative syndrome caused by mutation in PRKCD","type":"exact"},{"name":"autoimmune lymphoproliferative syndrome type III","type":"exact"},{"name":"autoimmune lymphoproliferative syndrome, type 3","type":"related"},{"name":"autoimmune lymphoproliferative syndrome, type III","type":"related"},{"name":"autoimmune lymphoproliferative syndrome-undetermined variant","type":"exact"},{"name":"common variable immunodeficiency 9","type":"exact"},{"name":"immunodeficiency, common variable, 9","type":"related"},{"name":"immunodeficiency, common variable, 9, formerly","type":"related"},{"name":"type 3 ALPS","type":"exact"}],"termid":"MONDO:0014253","xrefs":{"Monarch":{"xref_id":"0014253"}}}


id: GO:1901235
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of (R)-carnitine from one side of a membrane to the other.","definition_xrefs":["GOC:TermGenie","PMID:16365042","PMID:20829798","PMID:20357772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carnitine transmembrane transporter activity","termid":"GO:0015226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"(R)-carnitine transmembrane transporter activity","termid":"GO:1901235"}


id: PBO:0067147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 197, pseudogene","termid":"PBO:0067147"}


id: MONDO:0024267
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete epidemic encephalitis (obsolete MONDO:0024267)","termid":"MONDO:0024267","xrefs":{"Monarch":{"xref_id":"0024267"}}}


id: PBO:0056721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meprin A subunit alpha pseudogene 3","termid":"PBO:0056721"}


id: MONDO:0042964
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A subtype of Machado-Joseph disease characterized by Parkinsonian symptoms that respond particularly well to levodopa treatment.","definition_xrefs":["Wikipedia:Machado–Joseph_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Machado-Joseph disease","termid":"MONDO:0007182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0000426","MONDO:0005559"],"is_obsolete":false,"name":"Machado-Joseph disease type 4","secondary_identifiers":["UMLS:C0686352","SCTID:91956006","MEDGEN:673233","ICD9:334.3"],"synonyms":[{"name":"azorean disease, type iv","type":"exact"}],"termid":"MONDO:0042964","xrefs":{"Monarch":{"xref_id":"0042964"}}}


id: PBO:0028882
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H3-K36_methylation","termid":"PBO:0028882"}


id: PR:Q9Y804
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A Fanconi-associated nuclease 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02674"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fanconi-associated nuclease 1 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC146.06c","secondary_identifiers":["UniProtKB:Q9Y804"],"synonyms":[{"name":"Spom972h-FAN1","type":"exact"}],"termid":"PR:Q9Y804"}


id: MONDO:0020231
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cardiac disease with cataract (obsolete MONDO:0020231)","secondary_identifiers":["Orphanet:98647"],"termid":"MONDO:0020231","xrefs":{"Monarch":{"xref_id":"0020231"}}}


id: PBO:0059800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 26","termid":"PBO:0059800"}


id: MONDO:0014537
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any nephronophthisis in which the cause of the disease is a mutation in the DCDC2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephronophthisis","termid":"MONDO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005240"],"is_obsolete":false,"name":"nephronophthisis 19","secondary_identifiers":["UMLS:C4015542","DOID:0111126","GARD:18081","MEDGEN:863979","OMIM:616217"],"synonyms":[{"name":"DCDC2 nephronophthisis (disease)","type":"exact"},{"name":"NPHP19","type":"exact"},{"name":"nephronophthisis (disease) caused by mutation in DCDC2","type":"exact"},{"name":"nephronophthisis 19","type":"exact"},{"name":"nephronophthisis type 19","type":"exact"}],"termid":"MONDO:0014537","xrefs":{"Monarch":{"xref_id":"0014537"}}}


id: MONDO:0018617
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Baroreflex failure is a rare disorder that causes fluctuations in blood pressure with episodes of severe hypertension (high blood pressure) and elevated heart rate in response to stress, exercise, and pain. Individuals may also have hypotension (low blood pressure) with normal or reduced heart rate during periods of rest. Symptoms of baroreflex failure may include headache, sweating, and a heart rate that does not respond to medications. The onset of baroreflex failure may be very abrupt or more gradual. In many cases, the cause of baroreflex failure is not known. However, baroreflex failure can result from surgery or radiation treatment for cancers of the neck, injury to the nerves involved in sensing blood pressure, or a degenerative neurologic disease. Treatment usually involves medications to control blood pressure and heart rate along with stress reduction techniques.","direct_ancestors":[{"relation_name":"is_a","term_name":"autonomic nervous system disorder","termid":"MONDO:0001292"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"baroreflex failure","secondary_identifiers":["GARD:10664","UMLS:C1959798","icd11.foundation:880662615","MEDGEN:742620","Orphanet:443084"],"termid":"MONDO:0018617","xrefs":{"Monarch":{"xref_id":"0018617"}}}


id: PBO:0060386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myocardial zonula adherens protein","termid":"PBO:0060386"}


id: PBO:0058702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6830","termid":"PBO:0058702"}


id: PBO:0004129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-binding protein associated factor Mot1 (predicted)","termid":"PBO:0004129"}


id: PBO:0064318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid phosphatase 7 (inactive)","termid":"PBO:0064318"}


id: MONDO:0018867
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete maple syrup urine disease (obsolete MONDO:0018867)","termid":"MONDO:0018867","xrefs":{"Monarch":{"xref_id":"0018867"}}}


id: PBO:0047868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(2)(q32.1)","termid":"PBO:0047868"}


id: PBO:0073891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 12 member 7","termid":"PBO:0073891"}


id: PBO:0091763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S acidic ribosomal protein P2","termid":"PBO:0091763"}


id: SO:0001688
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The boundary at which a restriction enzyme breaks the nucleotide sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide_cleavage_site","termid":"SO:0002204"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"restriction_enzyme_cleavage_junction","synonyms":[{"name":"restriction enzyme cleavage junction","type":"exact"}],"termid":"SO:0001688"}


id: PBO:0048153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forty-two-three domain containing 1","termid":"PBO:0048153"}


id: PBO:0065996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS like proto-oncogene A","termid":"PBO:0065996"}


id: PBO:0017095
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Extender of Chronological Lifespan","termid":"PBO:0017095"}


id: MONDO:0012810
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"intracranial berry aneurysm","termid":"MONDO:0016483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aneurysm, intracranial berry, 7","secondary_identifiers":["GARD:18325","MESH:C567406","OMIM:612161","MEDGEN:436919","UMLS:C2677337","DOID:0080970"],"synonyms":[{"name":"ANIB7","type":"exact"},{"name":"aneurysm, intracranial BERRY, 7","type":"related"}],"termid":"MONDO:0012810","xrefs":{"Monarch":{"xref_id":"0012810"}}}


id: MONDO:0016709
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A medulloblastoma composed of sheets of large cells mixed with cells characterized by marked nuclear pleomorphism and high mitotic activity.","definition_xrefs":["NCIT:C129436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"medulloblastoma","termid":"MONDO:0007959"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaplastic/large cell medulloblastoma","secondary_identifiers":["GARD:20717","MEDGEN:1389864","UMLS:C4330531","Orphanet:251855","ONCOTREE:AMBL"],"synonyms":[{"name":"large cell/anaplastic medulloblastoma","type":"exact"}],"termid":"MONDO:0016709","xrefs":{"Monarch":{"xref_id":"0016709"}}}


id: GO:0030251
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of guanylate cyclase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase inhibitor activity","termid":"GO:0010852"},{"relation_name":"is_a","term_name":"guanylate cyclase regulator activity","termid":"GO:0030249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140678","GO:0004857","GO:0030234","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"guanylate cyclase inhibitor activity","termid":"GO:0030251"}


id: PBO:0041792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAPZA1 pseudogene 5","termid":"PBO:0041792"}


id: PBO:0040880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone morphogenetic protein 5","termid":"PBO:0040880"}


id: GO:0033679
data:
  {"annotated_genes":["SJAG_00857","SJAG_00884","SJAG_04210"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108264,109080,117142],"is_not":false,"summary":null,"term":"GO:0033679"}]},"cv_name":"molecular_function","definition":"Unwinding of a DNA/RNA duplex in the 3' to 5' direction, driven by ATP hydrolysis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA/RNA helicase activity","termid":"GO:0033677"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00857":null,"SJAG_00884":null,"SJAG_04210":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0140098","GO:0003674","GO:0140097","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"3'-5' DNA/RNA helicase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0033681"],"synonyms":[{"name":"3' to 5' DNA/RNA helicase activity","type":"exact"},{"name":"ATP-dependent 3' to 5' DNA/RNA helicase activity","type":"exact"},{"name":"ATP-dependent 3'-5' DNA/RNA helicase activity","type":"exact"}],"termid":"GO:0033679","terms_by_termid":{"GO:0033679":null}}


id: GO:0001828
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenesis of cells in the inner cell mass.","definition_xrefs":["ISBN:0124020607","ISBN:0198542771","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis","termid":"GO:0000902"},{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"inner cell mass cell differentiation","termid":"GO:0001826"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inner cell mass cellular morphogenesis","termid":"GO:0001828"}


id: GO:0052727
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-antheraxanthin = all-trans-capsanthin.","definition_xrefs":["RHEA:17373"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity","termid":"GO:0016860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"capsanthin synthase activity","secondary_identifiers":["MetaCyc:RXN-7947"],"synonyms":[{"name":"CCS","type":"broad"},{"name":"capsanthin-capsorubin synthase activity","type":"broad"},{"name":"ketoxanthophyll synthase activity","type":"broad"}],"termid":"GO:0052727"}


id: CHEBI:16356
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3',5'-cyclic GMP","termid":"CHEBI:16356"}


id: GO:0048211
data:
  {"annotated_genes":["SJAG_01633"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72189],"is_not":false,"summary":null,"term":"GO:0048211"}]},"cv_name":"biological_process","definition":"The initial attachment of a Golgi transport vesicle membrane to a target membrane, mediated by proteins protruding from the membrane of the Golgi vesicle and the target membrane.","definition_xrefs":["ISBN:0716731363","GOC:jid","PMID:10219233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle docking","termid":"GO:0048278"},{"relation_name":"part_of","term_name":"Golgi vesicle transport","termid":"GO:0048193"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01633":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0140056"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0051179","GO:0006810","GO:0140056"],"is_obsolete":false,"name":"Golgi vesicle docking","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"Golgi vesicle docking with target membrane","type":"exact"},{"name":"Golgi vesicle to membrane docking","type":"exact"},{"name":"Golgi-derived vesicle docking","type":"exact"},{"name":"dictyosome vesicle docking to target membrane","type":"narrow"}],"termid":"GO:0048211","terms_by_termid":{"GO:0048211":null}}


id: GO:2000520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of immunological synapse formation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lymphocyte activation","termid":"GO:0051249"},{"relation_name":"regulates","term_name":"immunological synapse formation","termid":"GO:0001771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of immunological synapse formation","synonyms":[{"name":"regulation of formation of immunological synapse","type":"exact"}],"termid":"GO:2000520"}


id: MONDO:1012688
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lysosomal storage disease that occurs in pigs due to a mutation in the HEXA gene.","definition_xrefs":["OMIA:001461-9823"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gangliosidosis, pig","termid":"MONDO:1010842"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GM2 gangliosidosis, HEXA-related, pig","synonyms":[{"name":"gangliosidosis, GM2, type I (B variant), pig","type":"related"}],"termid":"MONDO:1012688","xrefs":{"Monarch":{"xref_id":"1012688"}}}


id: PBO:0031590
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_process","termid":"PBO:0031590"}


id: GO:0098711
data:
  {"annotated_genes":["SJAG_02968"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115070],"is_not":false,"summary":null,"term":"GO:0098711"}]},"cv_name":"biological_process","definition":"The directed movement of iron ions from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:mah","PMID:8321236"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron import into cell","termid":"GO:0033212"},{"relation_name":"is_a","term_name":"iron ion transmembrane transport","termid":"GO:0034755"},{"relation_name":"is_a","term_name":"inorganic cation import across plasma membrane","termid":"GO:0098659"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02968":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0006810","GO:0098771","GO:0008150"],"is_obsolete":false,"name":"iron ion import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0097460","GO:0098707","GO:0097459"],"synonyms":[{"name":"ferrous ion import into cell","type":"related"},{"name":"ferrous iron import across plasma membrane","type":"related"},{"name":"ferrous iron import into cell","type":"related"},{"name":"iron import into cell","type":"related"},{"name":"iron ion import into cell","type":"exact"}],"termid":"GO:0098711","terms_by_termid":{"GO:0098711":null}}


id: GO:1990052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a lipid from the endoplasmic reticulum (ER) to the chloroplast.","definition_xrefs":["PMID:18689504"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular lipid transport","termid":"GO:0032365"},{"relation_name":"is_a","term_name":"endoplasmic reticulum to chloroplast transport","termid":"GO:1901965"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"ER to chloroplast lipid transport","synonyms":[{"name":"ER to chloroplast lipid trafficking","type":"exact"},{"name":"endoplasmic reticulum to chloroplast lipid transport","type":"exact"}],"termid":"GO:1990052"}


id: GO:1904127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of convergent extension involved in somitogenesis.","definition_xrefs":["PMID:24892953","GO_REF:0000058","GOC:TermGenie","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of convergent extension involved in axis elongation","termid":"GO:1901232"},{"relation_name":"is_a","term_name":"regulation of convergent extension involved in gastrulation","termid":"GO:1904103"},{"relation_name":"regulates","term_name":"convergent extension involved in somitogenesis","termid":"GO:0090246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of convergent extension involved in somitogenesis","termid":"GO:1904127"}


id: GO:0097505
data:
  {"annotated_genes":["SJAG_00819"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[78869],"is_not":false,"summary":null,"term":"GO:0097505"}]},"cv_name":"cellular_component","definition":"A ubiquitin ligase complex found to be involved in post-replicative bypass of UV-damaged DNA and UV mutagenesis. In S. cerevisiae, the complex contains the ubiquitin conjugating enzyme Rad6 and Rad18, a protein containing a RING finger motif and a nucleotide binding motif. The yeast Rad6-Rad18 heterodimer has ubiquitin conjugating activity, binds single-stranded DNA, and possesses single-stranded DNA-dependent ATPase activity.","definition_xrefs":["PMID:9287349","GOC:jd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin ligase complex","termid":"GO:0000151"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00819":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Rad6-Rad18 complex","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0097505","terms_by_termid":{"GO:0097505":null}}


id: GO:0036004
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a GAF protein domain.","definition_xrefs":["InterPro:IPR003018","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"GAF domain binding","termid":"GO:0036004"}


id: MONDO:0005747
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An disease caused by infection with Enterovirus.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Picornaviridae infectious disease","termid":"MONDO:0005914"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enterovirus infectious disease","secondary_identifiers":["ICD9:079.89","MEDGEN:8647","MESH:D004769","EFO:0007255","UMLS:C0014378","SCTID:53648006"],"synonyms":[{"name":"Enterovirus caused disease or disorder","type":"exact"},{"name":"Enterovirus disease or disorder","type":"exact"},{"name":"Enterovirus infection","type":"related"},{"name":"Enterovirus infectious disease","type":"exact"},{"name":"disease caused by enterovirus","type":"related"},{"name":"disease due to enterovirus","type":"exact"},{"name":"enteroviral infection","type":"related"},{"name":"enterovirus infection","type":"related"},{"name":"enterovirus infectious disease","type":"exact"},{"name":"infection, Enterovirus","type":"related"},{"name":"infections, Enterovirus","type":"related"}],"termid":"MONDO:0005747","xrefs":{"Monarch":{"xref_id":"0005747"}}}


id: FYPO:0003145
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested in prophase under conditions where arrest does not normally occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle arrest in mitotic M phase","termid":"FYPO:0000608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"abnormal cell cycle arrest in mitotic prophase","synonyms":[{"name":"abnormal cell cycle arrest in mitotic prophase during vegetative growth","type":"exact"},{"name":"abnormal cell cycle arrest in prophase during mitotic cell cycle","type":"exact"},{"name":"abnormal mitotic cell cycle arrest in prophase","type":"exact"}],"termid":"FYPO:0003145"}


id: PBO:0050780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxytryptamine receptor 1D pseudogene 1","termid":"PBO:0050780"}


id: PBO:0034104
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-existence_starts_and_ends_during","termid":"PBO:0034104"}


id: PBO:0069259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 514, pseudogene","termid":"PBO:0069259"}


id: MONDO:0011009
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscular dystrophy, congenital, with severe central nervous system atrophy and absence of large myelinated fibers","secondary_identifiers":["UMLS:C1832665","MEDGEN:331338","MESH:C563378","OMIM:601170"],"synonyms":[{"name":"muscular dystrophy, congenital, with severe central nervous system atrophy and absence of large myelinated fibers","type":"exact"}],"termid":"MONDO:0011009","xrefs":{"Monarch":{"xref_id":"0011009"}}}


id: PBO:0068484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 65, pseudogene","termid":"PBO:0068484"}


id: PBO:0031778
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_endocytosis_during_vegetative_growth","termid":"PBO:0031778"}


id: GO:2000806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of termination of RNA polymerase II transcription, poly(A)-coupled.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of termination of RNA polymerase II transcription","termid":"GO:1904595"},{"relation_name":"is_a","term_name":"regulation of termination of RNA polymerase II transcription, poly(A)-coupled","termid":"GO:2000804"},{"relation_name":"positively_regulates","term_name":"termination of RNA polymerase II transcription, poly(A)-coupled","termid":"GO:0030846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0006355","GO:0008150","GO:0010467","GO:0006351"],"is_obsolete":false,"name":"positive regulation of termination of RNA polymerase II transcription, poly(A)-coupled","synonyms":[{"name":"positive regulation of termination of RNA polymerase II transcription, polyadenylation-coupled","type":"related"},{"name":"positive regulation of transcription termination from Pol II promoter, RNA polymerase(A) coupled","type":"related"},{"name":"positive regulation of transcription termination from Pol II promoter, poly(A) coupled","type":"related"}],"termid":"GO:2000806"}


id: PBO:0058540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6085","termid":"PBO:0058540"}


id: GO:2001128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a methane from a methylamine.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methanogenesis","termid":"GO:0015948"},{"relation_name":"is_a","term_name":"methylamine metabolic process","termid":"GO:0030416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"methane biosynthetic process from methylamine","termid":"GO:2001128"}


id: GO:0160267
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A histone reader that recognizes a histone H1 monomethylated at lysine 26.","definition_xrefs":["PMID:17540172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H1 reader activity","termid":"GO:0140128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0140566"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0030674","GO:0140566","GO:0060090","GO:0003674"],"is_obsolete":false,"name":"histone H1K26me1 reader activity","termid":"GO:0160267"}


id: PBO:0038941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADH5 pseudogene 5","termid":"PBO:0038941"}


id: PBO:0047217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 224 member A","termid":"PBO:0047217"}


id: PBO:0079006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Thr (anticodon CGT) 6-1","termid":"PBO:0079006"}


id: GO:0002298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigenically naive CD4-positive, alpha-beta T cell acquires the specialized features of a CD4-positive, CD25-positive, alpha-beta regulatory T cell as part of an immune response.","definition_xrefs":["GOC:add","PMID:12093005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CD4-positive, alpha-beta T cell differentiation involved in immune response","termid":"GO:0002294"},{"relation_name":"is_a","term_name":"CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation","termid":"GO:0002361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation involved in immune response","synonyms":[{"name":"CD4-positive, CD25-positive, alpha-beta T cell development involved in immune response","type":"related"},{"name":"CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation during immune response","type":"related"},{"name":"CD4-positive, CD25-positive, alpha-beta regulatory T lymphocyte differentiation during immune response","type":"related"},{"name":"CD4-positive, CD25-positive, alpha-beta regulatory T-cell differentiation during immune response","type":"related"},{"name":"CD4-positive, CD25-positive, alpha-beta regulatory T-lymphocyte differentiation during immune response","type":"related"}],"termid":"GO:0002298"}


id: MOD:00162
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to O5-glucosylgalactosyl-L-hydroxylysine.","definition_xrefs":["PubMed:15149698","Unimod:393","RESID:AA0153","PubMed:4319110","PubMed:4288358"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5-hydroxy-L-lysine","termid":"MOD:00037"},{"relation_name":"is_a","term_name":"O-glycosylated residue","termid":"MOD:00396"},{"relation_name":"is_a","term_name":"galactosylated residue","termid":"MOD:00476"},{"relation_name":"is_a","term_name":"glucosylated","termid":"MOD:00726"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"O5-glucosylgalactosyl-L-hydroxylysine","synonyms":[{"name":"(2S,5R)-2,6-diamino-5-[2-O-(alpha-D-glucopyranosyl)-beta-D-galactopyranosyloxy]hexanoic acid","type":"exact"},{"name":"5-(2-O-alpha-D-glucopyranosyl-beta-D-galactopyranosyl)oxy-L-lysine","type":"exact"},{"name":"Glucosylgalactosyl","type":"related"},{"name":"O5-glucosylgalactosyl-L-hydroxylysine","type":"exact"},{"name":"OGlcGal5HyLys","type":"exact"},{"name":"glucosylgalactosyl hydroxylysine","type":"related"}],"termid":"MOD:00162"}


id: GO:0070533
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the BRCA1-BARD1 heterodimer, CtIP and Mre11/Rad50/NBS1 (M/R/N) complex, and binds to DNA at DNA damage sites. BRCA1-C binding ta damaged DNA is required for DNA damage-induced Chk1 phosphorylation and the G2/M transition checkpoint.","definition_xrefs":["PMID:15485915","PMID:16391231","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"BRCA1-C complex","termid":"GO:0070533"}


id: GO:0045734
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of acetate, the anion of acetic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"is_a","term_name":"regulation of ketone metabolic process","termid":"GO:0010565"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"acetate catabolic process","termid":"GO:0045733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of acetate catabolic process","synonyms":[{"name":"regulation of acetate breakdown","type":"exact"},{"name":"regulation of acetate catabolism","type":"exact"},{"name":"regulation of acetate degradation","type":"exact"}],"termid":"GO:0045734"}


id: GO:1990543
data:
  {"annotated_genes":["SJAG_01890","SJAG_01589"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90081,104429],"is_not":false,"summary":null,"term":"GO:1990543"}]},"cv_name":"biological_process","definition":"The process in which S-adenosyl-L-methionine is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["PMID:14609944"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosyl-L-methionine transmembrane transport","termid":"GO:1901962"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01589":null,"SJAG_01890":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"mitochondrial S-adenosyl-L-methionine transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990543","terms_by_termid":{"GO:1990543":null}}


id: FYPO:0007608
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of an RNA in a cell is abnormal during the meiotic cell cycle. An RNA may be observed in a place where it is not normally found, absent from a place where it is normally found, or both.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA localization","termid":"FYPO:0003057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"abnormal RNA localization during meiotic cell cycle","synonyms":[{"name":"abnormal RNA localisation during meiotic cell cycle","type":"exact"},{"name":"abnormal cellular RNA localization during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0007608"}


id: MONDO:0005460
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute viral respiratory infection caused by a strain of influenza virus which is endemic in swine (pigs). Rarely reported in humans prior to 2009, the disease is caused by a mutated strain of swine influenza A (H1N1) virus. It is highly contagious and spreads mainly through coughing and sneezing. Signs and symptoms include fever, chills, coughing, sore throat headache, muscle ache, and generalized weakness. Antiviral medications are most effective in the first two days of the illness.","definition_xrefs":["NCIT:C80444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"influenza","termid":"MONDO:0005812"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"swine influenza","secondary_identifiers":["EFO:0005226","SCTID:442696006","UMLS:C0276357","DOID:0050211","MEDGEN:1385137"],"synonyms":[{"name":"H1N1 Influenza","type":"exact"},{"name":"H1N1 Virus infection","type":"exact"},{"name":"H1N1 flu","type":"exact"},{"name":"Influenza A (H1N1)","type":"exact"},{"name":"Influenza A (H1N1) Virus infection","type":"exact"},{"name":"Swine influenza virus caused influenza","type":"exact"},{"name":"Swine influenza virus influenza","type":"exact"},{"name":"swine flu","type":"exact"}],"termid":"MONDO:0005460","xrefs":{"Monarch":{"xref_id":"0005460"}}}


id: PBO:0027144
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_mitotic_G2_DNA_damage_checkpoint","termid":"PBO:0027144"}


id: GO:1904616
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of actin binding.","definition_xrefs":["GOC:mr","GOC:TermGenie","GO_REF:0000059","PMID:8621557"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of actin binding (obsolete GO:1904616)","synonyms":[{"name":"regulation of membrane associated actin binding","type":"narrow"}],"termid":"GO:1904616"}


id: PBO:0082735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Rpd3L histone deacetylase complex; required for its structural integrity and catalytic activity, involved in transcriptional silencing and required for sporulation; relocalizes to the cytosol in response to hypoxia; cells defective in SDS3 display pleiotropic phenotypes","termid":"PBO:0082735"}


id: PBO:0050453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homer scaffold protein 1","termid":"PBO:0050453"}


id: GO:0061779
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Subunit of the MHC class I peptide loading complex (GO:0042824) (=PLC) involved in the assembly of the heavy-chain-beta2-microglobulin dimers of the MHC class I molecules that fold with eight to ten residue peptides in the endoplasmic reticulum. Required for the inhibition of the reduction of the disulfide bonds of the heavy chains and the assembly and stabilization of the PLC, suggesting it may play a structural rather than a catalytic role.","definition_xrefs":["PMID:17603487","Intact:EBI-9013963","GOC:dph","Intact:EBI-11896237","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"MHC class I peptide loading complex","termid":"GO:0042824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005789","GO:0032991","GO:0005737","GO:0005783","GO:0005575"],"is_obsolete":false,"name":"Tapasin-ERp57 complex","termid":"GO:0061779"}


id: MONDO:0023002
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double discordia","secondary_identifiers":["UMLS:C0332941","MEDGEN:137675"],"synonyms":[{"name":"atrio-ventricular and ventriculo-arterial double Discordia","type":"related"},{"name":"corrected transposition","type":"related"}],"termid":"MONDO:0023002","xrefs":{"Monarch":{"xref_id":"0023002"}}}


id: PR:O13282
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription initiation factor TFIID subunit 5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04393","PANTHER:PTHR19879:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription initiation factor TFIID subunit 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC5E4.03c","secondary_identifiers":["UniProtKB:O13282"],"synonyms":[{"name":"Spom972h-TAF5","type":"exact"},{"name":"TAFII-72 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"transcription initiation factor TFIID 72 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13282"}


id: GO:0034161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of toll-like receptor 8 signaling pathway.","definition_xrefs":["PMID:17328678","GOC:add","PMID:16551253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of toll-like receptor 8 signaling pathway","termid":"GO:0034159"},{"relation_name":"is_a","term_name":"positive regulation of pattern recognition receptor signaling pathway","termid":"GO:0062208"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"toll-like receptor 8 signaling pathway","termid":"GO:0034158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of toll-like receptor 8 signaling pathway","synonyms":[{"name":"positive regulation of TLR8 signaling pathway","type":"exact"},{"name":"positive regulation of toll-like receptor 8 signalling pathway","type":"exact"}],"termid":"GO:0034161"}


id: GO:0048259
data:
  {"annotated_genes":["SJAG_04052","SJAG_04465","SJAG_00649"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[120739,112876,113523],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000369"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of receptor mediated endocytosis, the uptake of external materials by cells, utilizing receptors to ensure specificity of transport.","definition_xrefs":["GOC:go_curators","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endocytosis","termid":"GO:0030100"},{"relation_name":"regulates","term_name":"receptor-mediated endocytosis","termid":"GO:0006898"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00649":null,"SJAG_04052":null,"SJAG_04465":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"regulation of receptor-mediated endocytosis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of receptor mediated endocytosis","type":"exact"}],"termid":"GO:0048259","terms_by_termid":{"GO:2000369":null}}


id: PR:Q9UTQ4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1071.11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTQ4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1071.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1071.11","synonyms":[{"name":"Spom972h-SPAC1071.11","type":"exact"}],"termid":"PR:Q9UTQ4"}


id: PBO:0005068
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.1.38","termid":"PBO:0005068"}


id: GO:0001110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that mediates the transition from the initiation to the elongation phases of transcription by RNA polymerase III, generally including a conformational change from the initiation conformation to the elongation conformation. Promoter clearance often involves breaking contact with transcription factors involved only in the initiation phase.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter clearance during DNA-templated transcription","termid":"GO:0001109"},{"relation_name":"part_of","term_name":"transcription by RNA polymerase III","termid":"GO:0006383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0008150","GO:0006351","GO:0010467"],"is_obsolete":false,"name":"RNA polymerase III promoter clearance","synonyms":[{"name":"promoter clearance from RNA polymerase III promoter","type":"exact"}],"termid":"GO:0001110"}


id: MONDO:1010774
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pemphigus that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pemphigus, non-human animal","termid":"MONDO:1010138"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pemphigus, horse","secondary_identifiers":["OMIA:001188-9796"],"termid":"MONDO:1010774","xrefs":{"Monarch":{"xref_id":"1010774"}}}


id: MONDO:0006979
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease of cats and mink characterized by a marked inflammation of adipose tissue and the deposition of 'ceroid' pigment in the interstices of the adipose cells. It is believed to be caused by feeding diets containing too much unsaturated fatty acid and too little vitamin E. (Merck Veterinary Manual, 5th ed; Stedman, 25th ed)","definition_xrefs":["MESH:D013231"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nutritional deficiency disease, non-human animal","termid":"MONDO:0700103"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"steatitis","secondary_identifiers":["SCTID:33882007","DOID:4025"],"synonyms":[{"name":"Nutritional Panniculitis","type":"exact"},{"name":"Nutritional Steatitis","type":"exact"},{"name":"Yellow fat disease","type":"exact"}],"termid":"MONDO:0006979","xrefs":{"Monarch":{"xref_id":"0006979"}}}


id: PBO:0086533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; overlaps ORF YEL010W","termid":"PBO:0086533"}


id: GO:0010622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process in which the identity of an ovule is specified. Identity is considered to be the aggregate of characteristics by which a structure is recognized.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"part_of","term_name":"plant ovule morphogenesis","termid":"GO:0048482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of ovule identity","termid":"GO:0010622"}


id: GO:0044470
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which an organism inhibits or disrupts blood coagulatio in another organism via the action of a venom.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"venom-mediated perturbation of blood coagulation","termid":"GO:0044468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"venom-mediated suppression of blood coagulation","synonyms":[{"name":"envenomation resulting in negative regulation of blood coagulation in another organism","type":"exact"},{"name":"envenomation resulting in negative regulation of blood coagulation in other organism","type":"exact"},{"name":"envenomation suppressing blood coagulation","type":"exact"}],"termid":"GO:0044470"}


id: GO:2000516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of CD4-positive, alpha-beta T cell activation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of alpha-beta T cell activation","termid":"GO:0046635"},{"relation_name":"is_a","term_name":"regulation of CD4-positive, alpha-beta T cell activation","termid":"GO:2000514"},{"relation_name":"positively_regulates","term_name":"CD4-positive, alpha-beta T cell activation","termid":"GO:0035710"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of CD4-positive, alpha-beta T cell activation","termid":"GO:2000516"}


id: PBO:0043665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coenzyme Q8B","termid":"PBO:0043665"}


id: PBO:0079070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Trp (anticodon CCA) 4-1","termid":"PBO:0079070"}


id: PBO:0025443
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maple Syrup Urine Disease","termid":"PBO:0025443"}


id: GO:0033903
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the endohydrolysis of 1,3- or 1,4-linkages in beta-D-glucans when the glucose residue whose reducing group is involved in the linkage to be hydrolysed is itself substituted at C-3.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete endo-1,3(4)-beta-glucanase activity (obsolete GO:0033903)","synonyms":[{"name":"endo-1,3(4)-beta-glucanase activity","type":"exact"}],"termid":"GO:0033903"}


id: PBO:0038326
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_biological_role","termid":"PBO:0038326"}


id: PR:O14187
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pre-mRNA-processing-splicing factor 8 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01110","PANTHER:PTHR11140:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor spp42 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F8.12c","secondary_identifiers":["UniProtKB:O14187"],"synonyms":[{"name":"Spom972h-PRPF8","type":"exact"},{"name":"complexed with cdc5 protein 6 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14187"}


id: MONDO:0013040
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"atypical hemolytic uremic syndrome with complement gene abnormality","termid":"MONDO:0035290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"atypical hemolytic-uremic syndrome with MCP/CD46 anomaly","secondary_identifiers":["Orphanet:93576","OMIM:612922","UMLS:C2752040","MEDGEN:414167","NANDO:2200803","GARD:18552"],"synonyms":[{"name":"AHUS, susceptibility to, 2","type":"related"},{"name":"AHUS2","type":"related"},{"name":"D-HUS with MCP/CD46 anomaly","type":"exact"},{"name":"aHUS with MCP/CD46 anomaly","type":"exact"},{"name":"aHUS2","type":"related"},{"name":"atypical HUS with MCP/CD46 anomaly","type":"exact"},{"name":"hemolytic uremic syndrome, atypical, susceptibility to, 2","type":"related"},{"name":"hemolytic uremic syndrome, atypical, susceptibility to, type 2","type":"exact"},{"name":"hemolytic-uremic syndrome without diarrhea with MCP/CD46 anomaly","type":"exact"},{"name":"hemolytic-uremic syndrome without diarrhoea with MCP/CD46 anomaly","type":"exact"},{"name":"susceptibility to atypical hemolytic uremic syndrome 2","type":"related"}],"termid":"MONDO:0013040","xrefs":{"Monarch":{"xref_id":"0013040"}}}


id: PBO:0031585
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_G418","termid":"PBO:0031585"}


id: PBO:0050745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1 pseudogene 7","termid":"PBO:0050745"}


id: PBO:0061401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"natriuretic peptide receptor 2","termid":"PBO:0061401"}


id: GO:0003297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic process in which the aorta inserts between the atrioventricular valves, contributing to the shaping of the heart.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"heart morphogenesis","termid":"GO:0003007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heart wedging","termid":"GO:0003297"}


id: MONDO:0002543
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An oligodendroglioma occurring during adulthood.","definition_xrefs":["NCIT:C4014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligodendroglioma","termid":"MONDO:0016695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adult oligodendroglioma","secondary_identifiers":["DOID:3186","NANDO:2200089","MEDGEN:75924","UMLS:C0279070"],"synonyms":[{"name":"adult brain oligodendroglioma","type":"narrow"},{"name":"adult oligodendroglioma","type":"exact"},{"name":"grade II adult oligodendroglial tumor","type":"exact"},{"name":"grade II adult oligodendroglial tumour","type":"exact"},{"name":"oligodendroglioma","type":"broad"},{"name":"oligodendroglioma of adults","type":"exact"}],"termid":"MONDO:0002543","xrefs":{"Monarch":{"xref_id":"0002543"}}}


id: GO:1905718
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any microtubule end that is part of a mitotic spindle astral microtubule.","definition_xrefs":["PMID:11007487","GO_REF:0000064","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete mitotic spindle astral microtubule end (obsolete GO:1905718)","synonyms":[{"name":"mitotic spindle astral microtubule tip","type":"exact"}],"termid":"GO:1905718"}


id: GO:0004422
data:
  {"annotated_genes":["SJAG_06634"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77380],"is_not":false,"summary":null,"term":"GO:0004422"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: IMP + diphosphate = hypoxanthine + 5-phospho-alpha-D-ribose 1-diphosphate.","definition_xrefs":["RHEA:17973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine phosphoribosyltransferase activity","termid":"GO:0106130"}],"gene_count":1,"genes_by_uniquename":{"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"hypoxanthine phosphoribosyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R01132","MetaCyc:HYPOXANPRIBOSYLTRAN-RXN"],"synonyms":[{"name":"6-hydroxypurine phosphoribosyltransferase activity","type":"related"},{"name":"6-mercaptopurine phosphoribosyltransferase activity","type":"related"},{"name":"HGPRTase activity","type":"related"},{"name":"HPRT","type":"related"},{"name":"IMP diphosphorylase activity","type":"related"},{"name":"IMP pyrophosphorylase activity","type":"related"},{"name":"IMP-GMP pyrophosphorylase activity","type":"related"},{"name":"IMP:diphosphate phospho-D-ribosyltransferase activity","type":"related"},{"name":"Transphosphoribosidase activity","type":"broad"},{"name":"guanine-hypoxanthine phosphoribosyltransferase activity","type":"broad"},{"name":"hypoxanthine-guanine phosphoribosyltransferase activity","type":"broad"},{"name":"inosinate pyrophosphorylase activity","type":"related"},{"name":"inosine 5'-phosphate pyrophosphorylase activity","type":"related"},{"name":"inosinic acid pyrophosphorylase activity","type":"related"},{"name":"inosinic pyrophosphorylase activity","type":"related"},{"name":"purine-6-thiol phosphoribosyltransferase activity","type":"related"}],"termid":"GO:0004422","terms_by_termid":{"GO:0004422":null}}


id: PBO:0002508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic cysteine-tRNA ligase Crs1 (predicted)","termid":"PBO:0002508"}


id: GO:0030876
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of an alpha and a beta receptor subunit and an interleukin ligand. In human, Interleukin-19, -20 and -24 bind IL20RA/IL20RB receptor subunits and Interleukin-20 and -24 bind IL22RA1/IL20RB receptor subunits.","definition_xrefs":["PMID:12351624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"interleukin-20 receptor complex","synonyms":[{"name":"IL-20 receptor complex","type":"exact"}],"termid":"GO:0030876"}


id: PBO:0082533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell-wall L-asparaginase II involved in asparagine catabolism; expression induced during nitrogen starvation; ORF contains a short non-coding RNA that enhances expression of full-length gene; likely arose in via horizontal gene transfer from the wine yeast Wickerhamomyces anomalus or a close relative; reference strain S288C has four copies of ASP3; ASP3-4 has a paralog, ASP3-2, that arose from a segmental duplication","termid":"PBO:0082533"}


id: PBO:0061193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronatin","termid":"PBO:0061193"}


id: FYPO:0004433
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to viridicatumtoxin. Cells stop growing (and may die) at a concentration of viridicatumtoxin that allows wild type cells to grow.","definition_xrefs":["PMID:18204818","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0002683","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to viridicatumtoxin","synonyms":[{"name":"hypersensitive to viridicatumtoxin","type":"exact"},{"name":"sensitive to viridicatumtoxin during mitotic cell cycle","type":"related"},{"name":"sensitive to viridicatumtoxin during vegetative growth","type":"exact"}],"termid":"FYPO:0004433"}


id: FYPO:0000864
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the trimethylation of lysine at position 9 of histone H3 in centromeric regions is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 trimethylation during vegetative growth","termid":"FYPO:0000787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0002494","FYPO:0002274","FYPO:0001985"],"is_obsolete":false,"name":"abnormal histone H3-K9 trimethylation at centromere during vegetative growth","synonyms":[{"name":"abnormal centromeric histone H3-K9 trimethylation during vegetative growth","type":"exact"},{"name":"abnormal histone H3 K9 trimethylation at centromere during vegetative growth","type":"exact"},{"name":"abnormal histone H3-K9 trimethylation at centromere during mitotic cell cycle","type":"related"},{"name":"abnormal histone H3K9 trimethylation at centromere during vegetative growth","type":"exact"},{"name":"abnormal histone H3K9me3 at centromere during vegetative growth","type":"exact"},{"name":"abnormal histone lysine H3 K9 trimethylation at centromere during vegetative growth","type":"exact"}],"termid":"FYPO:0000864"}


id: PBO:0049660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H4 clustered histone 14","termid":"PBO:0049660"}


id: PBO:0078267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 3-1","termid":"PBO:0078267"}


id: GO:0031334
data:
  {"annotated_genes":["SJAG_01771","SJAG_03048","SJAG_01837","SJAG_00718","SJAG_03421","SJAG_00973","SJAG_00766"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104198,91467,118537],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905561"},{"annotations":[107522,90030],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001178"},{"annotations":[81314,91526],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045899"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein complex assembly.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"is_a","term_name":"positive regulation of cellular component biogenesis","termid":"GO:0044089"},{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"positively_regulates","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00718":null,"SJAG_00766":null,"SJAG_00973":null,"SJAG_01771":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_03421":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of protein-containing complex assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"activation of protein complex assembly","type":"narrow"},{"name":"positive regulation of protein complex assembly","type":"related"},{"name":"stimulation of protein complex assembly","type":"narrow"},{"name":"up regulation of protein complex assembly","type":"exact"},{"name":"up-regulation of protein complex assembly","type":"exact"},{"name":"upregulation of protein complex assembly","type":"exact"}],"termid":"GO:0031334","terms_by_termid":{"GO:0045899":null,"GO:1905561":null,"GO:2001178":null}}


id: PBO:0068826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 64, pseudogene","termid":"PBO:0068826"}


id: PR:Q9P805
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dcp1 gene.","definition_xrefs":["UniProtKB:Q9P805","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA-decapping enzyme subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B9.21","synonyms":[{"name":"Spom972h-dcp1","type":"exact"}],"termid":"PR:Q9P805"}


id: GO:0045205
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the directed movement of MAP kinase into, out of or within a cell, or between cells.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729","GOC:ebc"],"gene_count":0,"genotype_count":0,"name":"obsolete MAPK transporter activity (obsolete GO:0045205)","synonyms":[{"name":"MAPK transporter activity","type":"exact"}],"termid":"GO:0045205"}


id: GO:2001274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of glucose import in response to insulin stimulus.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of glucose import in response to insulin stimulus (obsolete GO:2001274)","synonyms":[{"name":"negative regulation of cellular glucose import in response to insulin stimulus","type":"exact"}],"termid":"GO:2001274"}


id: MONDO:0007250
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Camptodactyly of fingers is a rare, genetic, non-syndromic, congenital limb malformation characterized by a painless, non-traumatic, non-neurogenic, often bilateral, permanent flexion contracture at the proximal interphalangeal joint of a postaxial finger, resulting in permanent volar inclination of the affected digit. The fifth finger is always involved, but additional digits might also be affected.","definition_xrefs":["Orphanet:295016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"camptodactyly of fingers","secondary_identifiers":["UMLS:C2751430","icd11.foundation:1449348512","OMIM:114200","ICD9:755.59","SCTID:29271008","MEDGEN:416550","GARD:9448","MESH:C536852","MESH:C567780"],"synonyms":[{"name":"CAMPD1","type":"related"},{"name":"camptodactyly 1","type":"related"},{"name":"camptodactyly and knuckle pads","type":"related"},{"name":"crooked little finger, familial","type":"related"},{"name":"familial streblodactyly","type":"related"},{"name":"minor streblomicrodactyly, familial","type":"related"},{"name":"streblodactyly","type":"related"}],"termid":"MONDO:0007250","xrefs":{"Monarch":{"xref_id":"0007250"}}}


id: PBO:0091881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"class I glutamine amidotransferase family protein","termid":"PBO:0091881"}


id: PBO:0059924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 10","termid":"PBO:0059924"}


id: PBO:0000143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nifs homolog, possible cysteine desulfurase","termid":"PBO:0000143"}


id: GO:0016795
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of a phosphoric triester.","definition_xrefs":["EC:3.1.8.-","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric ester hydrolase activity","termid":"GO:0042578"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"phosphoric triester hydrolase activity","termid":"GO:0016795"}


id: PBO:0082267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ammonium permease; belongs to Mep-Amt-Rh family of well-conserved ammonium (NH4+) transporters that includes the human Rh factors; expression is under the nitrogen catabolite repression regulation; activity regulated by TORC1 effectors, Npr1p and Par32p; human homolog RHCG complements yeast null mutant; mutations in human homolog RHCG implicated in metabolic acidosis; MEP1 has a paralog, MEP3, that arose from the whole genome duplication","termid":"PBO:0082267"}


id: GO:0002066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a columnar/cuboidal epithelial cell over time, from its formation to the mature structure. A columnar/cuboidal epithelial cell is a cell usually found in a two dimensional sheet with a free surface. Columnar/cuboidal epithelial cells take on the shape of a column or cube.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell development","termid":"GO:0002064"},{"relation_name":"part_of","term_name":"columnar/cuboidal epithelial cell differentiation","termid":"GO:0002065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"columnar/cuboidal epithelial cell development","termid":"GO:0002066"}


id: PR:P78780
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1827.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:P78780"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartate-semialdehyde dehydrogenase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1827.06c","synonyms":[{"name":"ASA dehydrogenase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ASADH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPCC1827.06c","type":"exact"},{"name":"aspartate-beta-semialdehyde dehydrogenase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78780"}


id: PBO:0046469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erb-b2 receptor tyrosine kinase 3","termid":"PBO:0046469"}


id: SO:0001189
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An oligo composed of LNA residues.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"LNA","termid":"SO:0001188"},{"relation_name":"is_a","term_name":"synthetic_oligo","termid":"SO:0001247"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LNA_oligo","secondary_identifiers":["http://en.wikipedia.org/wiki/Locked_nucleic_acid"],"synonyms":[{"name":"LNA oligo","type":"exact"},{"name":"locked nucleic acid","type":"exact"}],"termid":"SO:0001189"}


id: MOD:01544
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the N6'-hydrogen atom of a lysine residue with the Applied Biosystems iTRAQ8plex-115 reporter+balance group.","definition_xrefs":["Unimod:731#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-115 reporter+balance reagent acylated residue","termid":"MOD:01542"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent N-acylated residue","termid":"MOD:01710"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"iTRAQ8plex-115 reporter+balance reagent N6-acylated lysine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 115, 118, 119 & 121","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ8plex:13C(6)15N(2)","type":"related"}],"termid":"MOD:01544"}


id: PBO:0046002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EIF1AX pseudogene 2","termid":"PBO:0046002"}


id: GO:1900295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of heptasaccharide transport.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"regulation of heptasaccharide transport","termid":"GO:1900294"},{"relation_name":"negatively_regulates","term_name":"heptasaccharide transport","termid":"GO:2001104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of heptasaccharide transport","synonyms":[{"name":"down regulation of heptasaccharide transport","type":"exact"},{"name":"down-regulation of heptasaccharide transport","type":"exact"},{"name":"downregulation of heptasaccharide transport","type":"exact"},{"name":"inhibition of heptasaccharide transport","type":"narrow"}],"termid":"GO:1900295"}


id: GO:0010120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of camalexin, an indole phytoalexin.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indole phytoalexin biosynthetic process","termid":"GO:0009700"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"is_a","term_name":"camalexin metabolic process","termid":"GO:0052317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0006790"],"is_obsolete":false,"name":"camalexin biosynthetic process","secondary_identifiers":["MetaCyc:CAMALEXIN-SYN"],"synonyms":[{"name":"camalexin anabolism","type":"exact"},{"name":"camalexin biosynthesis","type":"exact"},{"name":"camalexin formation","type":"exact"},{"name":"camalexin synthesis","type":"exact"}],"termid":"GO:0010120"}


id: GO:0021665
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to creating the structural organization of rhombomere 5. This process pertains to the physical shaping of a rudimentary structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order.","definition_xrefs":["GOC:cls","GOC:dgh","GOC:dph","GO_REF:0000021","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere structural organization","termid":"GO:0021595"},{"relation_name":"part_of","term_name":"rhombomere 5 morphogenesis","termid":"GO:0021664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 5 structural organization","synonyms":[{"name":"rhombomere 5 structural organisation","type":"exact"}],"termid":"GO:0021665"}


id: FYPO:0004892
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing an echinocandin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0002060","FYPO:0000257","FYPO:0000139","FYPO:0002058","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on echinocandin","synonyms":[{"name":"normal cell population growth in presence of echinocandin","type":"exact"},{"name":"normal cell population growth on echinocandin","type":"exact"},{"name":"normal cellular response to echinocandin","type":"related"},{"name":"normal vegetative cell population growth on echinocandin","type":"exact"}],"termid":"FYPO:0004892"}


id: GO:0040025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the egg-laying organ of female and hermaphrodite nematodes over time, from its formation to the mature structure. In nematodes, the vulva is formed from ventral epidermal cells during larval stages to give rise to a fully formed vulva in the adult.","definition_xrefs":["GOC:kmv","GOC:ems","ISBN:087969307X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"},{"relation_name":"part_of","term_name":"nematode larval development","termid":"GO:0002119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vulval development","termid":"GO:0040025"}


id: MONDO:0003720
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A usually aggressive malignant neoplasm arising from the kidney. It is characterized by the presence of spindle-shaped fibroblasts and collagenous stroma formation in a herringbone growth pattern.","definition_xrefs":["NCIT:C7726"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney sarcoma","termid":"MONDO:0002930"},{"relation_name":"is_a","term_name":"fibrosarcoma","termid":"MONDO:0005164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0004992"],"is_obsolete":false,"name":"kidney fibrosarcoma","secondary_identifiers":["MEDGEN:116050","DOID:5982","UMLS:C0238208"],"synonyms":[{"name":"fibrosarcoma of kidney","type":"exact"},{"name":"fibrosarcoma of the kidney","type":"exact"},{"name":"kidney fibrosarcoma","type":"exact"},{"name":"kidney fibrosarcoma (disease)","type":"exact"},{"name":"renal fibrosarcoma","type":"exact"}],"termid":"MONDO:0003720","xrefs":{"Monarch":{"xref_id":"0003720"}}}


id: MONDO:0022770
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"circumscribed cutaneous aplasia of the vertex","termid":"MONDO:0022770","xrefs":{"Monarch":{"xref_id":"0022770"}}}


id: PR:O94658
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl3602 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94658"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L36-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC405.07","synonyms":[{"name":"Spom972h-rpl3602","type":"exact"}],"termid":"PR:O94658"}


id: GO:0045127
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetyl-D-glucosamine + ATP = N-acetyl-D-glucosamine 6-phosphate + ADP + H+.","definition_xrefs":["RHEA:17417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate kinase activity","termid":"GO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016740","GO:0016301","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"N-acetylglucosamine kinase activity","secondary_identifiers":["KEGG_REACTION:R01201","Reactome:R-HSA-6803771","EC:2.7.1.59","MetaCyc:N-ACETYLGLUCOSAMINE-KINASE-RXN"],"synonyms":[{"name":"2-acetylamino-2-deoxy-D-glucose kinase activity","type":"related"},{"name":"ATP:2-acetylamino-2-deoxy-D-glucose 6-phosphotransferase activity","type":"related"},{"name":"ATP:N-acetyl-D-glucosamine 6-phosphotransferase activity","type":"related"},{"name":"GlcNAc kinase activity","type":"related"},{"name":"acetylaminodeoxyglucokinase activity","type":"related"},{"name":"acetylglucosamine kinase (phosphorylating)","type":"related"}],"termid":"GO:0045127"}


id: MONDO:0016889
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosome 7p deletion is a chromosome abnormality that occurs when there is a missing copy of the genetic material located on the short arm (p) of chromosome 7. The severity of the condition and the signs and symptoms depend on the size and location of the deletion and which genes are involved. Features that often occur in people with chromosome 7p deletion include developmental delay, intellectual disability, behavioral problems, and distinctive facial features. Most cases are not inherited, but people can pass the deletion on to their children. Treatment is based on the signs and symptoms present in each person.","definition_xrefs":["GARD:0001346"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of chromosome 7","termid":"MONDO:0016872"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial deletion of the short arm of chromosome 7","secondary_identifiers":["GARD:1346","UMLS:C5679668","Orphanet:261911","icd11.foundation:1523142467","MEDGEN:1826021"],"synonyms":[{"name":"7p deletion","type":"related"},{"name":"7p monosomy","type":"related"},{"name":"chromosome 7p deletion","type":"related"},{"name":"deletion 7p","type":"related"},{"name":"monosomy 7p","type":"related"},{"name":"partial deletion of chromosome 7p","type":"exact"},{"name":"partial deletion of the short arm of chromosome type 7","type":"exact"},{"name":"partial monosomy 7p","type":"related"},{"name":"partial monosomy of chromosome 7p","type":"exact"},{"name":"partial monosomy of the short arm of chromosome 7","type":"exact"}],"termid":"MONDO:0016889","xrefs":{"Monarch":{"xref_id":"0016889"}}}


id: MONDO:0017958
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autoinflammatory syndrome","termid":"MONDO:0019751"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"magic syndrome","secondary_identifiers":["UMLS:C0406568","GARD:13371","MEDGEN:590513","Orphanet:324972"],"synonyms":[{"name":"mouth and genital ulcers with inflamed cartilage","type":"exact"}],"termid":"MONDO:0017958","xrefs":{"Monarch":{"xref_id":"0017958"}}}


id: PBO:0064809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP1R2 family member B","termid":"PBO:0064809"}


id: PBO:0038854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAMTS like 1","termid":"PBO:0038854"}


id: PBO:0070078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 35, pseudogene","termid":"PBO:0070078"}


id: PBO:0048191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GA binding protein transcription factor subunit alpha","termid":"PBO:0048191"}


id: GO:0004201
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of interleukin 1-beta by specific cleavage of Asp116-Ala117 and Asp27-Gly28 bonds in precursor. Enzymes with this function can also hydrolyze the terminal bond in the small-molecule substrate, Ac-Tyr-Val-Ala-Asp-NHMec.","definition_xrefs":["EC:3.4.22.36"],"gene_count":0,"genotype_count":0,"name":"obsolete caspase-1 activity (obsolete GO:0004201)","synonyms":[{"name":"ICE","type":"broad"},{"name":"caspase-1 activity","type":"exact"}],"termid":"GO:0004201"}


id: PBO:0039972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 4A pseudogene 3","termid":"PBO:0039972"}


id: PBO:0005482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein complex subunit 4 (predicted)","termid":"PBO:0005482"}


id: PBO:0029674
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_multinucleate_vegetative_cell_with_abnormal_septum_morphology","termid":"PBO:0029674"}


id: GO:0102879
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = (+)-thujopsene + diphosphoric acid.","definition_xrefs":["RHEA:30375","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"(+)-thujopsene synthase activity","secondary_identifiers":["EC:4.2.3.79","MetaCyc:RXN-8418"],"termid":"GO:0102879"}


id: PBO:0070452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L3 pseudogene 9","termid":"PBO:0070452"}


id: FYPO:0003466
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of trehalose measured in a cell is normal (i.e. indistinguishable from wild type) when the cell is subject to a heat stimulus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular trehalose level","termid":"FYPO:0001449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal cellular trehalose level during cellular response to heat","synonyms":[{"name":"normal cellular trehalose accumulation during cellular response to heat","type":"related"},{"name":"normal cellular trehalose level during cellular response to heat during mitotic cell cycle","type":"related"},{"name":"normal cellular trehalose level during cellular response to heat during vegetative growth","type":"exact"}],"termid":"FYPO:0003466"}


id: PBO:0063490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZ and LIM domain 1 pseudogene 1","termid":"PBO:0063490"}


id: PBO:0009796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UTP-glucose-1-phosphateuridylyltransferase-like","termid":"PBO:0009796"}


id: PBO:0085001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Negative regulator of actin nucleation-promoting factor activity; interacts with Las17p, a homolog of human Wiskott-Aldrich Syndrome protein (WASP), via an N-terminal SH3 domain, and along with LSB1 cooperatively inhibits the nucleation of actin filaments; short-lived protein whose levels increase in response to thermal stress; induces the formation of the [PIN+] and [RNQ+] prions when overproduced; PIN3 has a paralog, LSB1, that arose from the whole genome duplication","termid":"PBO:0085001"}


id: SO:0001745
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Uniparental disomy is a sequence_alteration where a diploid individual receives two copies for all or part of a chromosome from the mother and no copies of the same chromosome or region from the father.","definition_xrefs":["SO:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UPD","termid":"SO:0001744"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maternal_uniparental_disomy","synonyms":[{"name":"maternal uniparental disomy","type":"exact"}],"termid":"SO:0001745"}


id: PBO:0085038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential component of the HAT-B histone acetyltransferase complex; localized to the nucleus; has a role in telomeric silencing; other members are Hat1p and Hat2p","termid":"PBO:0085038"}


id: PBO:0005037
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.7.2","termid":"PBO:0005037"}


id: GO:0098584
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A secretory organelle of a host cell, some 50 nm in diameter, of presynaptic nerve terminals; accumulates in high concentrations of neurotransmitters and secretes these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell cytoplasmic vesicle","termid":"GO:0044161"},{"relation_name":"part_of","term_name":"host cell synapse","termid":"GO:0044221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell synaptic vesicle","termid":"GO:0098584"}


id: GO:0006303
data:
  {"annotated_genes":["SJAG_05372","SJAG_02527","SJAG_03048","SJAG_05373","SJAG_00640","SJAG_01677","SJAG_16460","SJAG_00823","SJAG_04199","SJAG_00441","SJAG_04372","SJAG_01076","SJAG_02237"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90359,90979,101762,106864,112800,113583,116145,118662],"is_not":false,"summary":null,"term":"GO:0006303"},{"annotations":[115751,118185],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097680"},{"annotations":[97694],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061674"},{"annotations":[104187],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:2001033"},{"annotations":[109244],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:2001034"}]},"cv_name":"biological_process","definition":"The repair of a double-strand break in DNA in which the two broken ends are rejoined with little or no sequence complementarity. Information at the DNA ends may be lost due to the modification of broken DNA ends. This term covers instances of separate pathways, called classical (or canonical) and alternative nonhomologous end joining (C-NHEJ and A-NHEJ). These in turn may further branch into sub-pathways, but evidence is still unclear.","definition_xrefs":["PMID:24837021","PMID:10827453","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"double-strand break repair","termid":"GO:0006302"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00441":null,"SJAG_00640":null,"SJAG_00823":null,"SJAG_01076":null,"SJAG_01677":null,"SJAG_02237":null,"SJAG_02527":null,"SJAG_03048":null,"SJAG_04199":null,"SJAG_04372":null,"SJAG_05372":null,"SJAG_05373":null,"SJAG_16460":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006281","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"double-strand break repair via nonhomologous end joining","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5693571"],"synonyms":[{"name":"NHEJ","type":"exact"}],"termid":"GO:0006303","terms_by_termid":{"GO:0006303":null,"GO:0061674":null,"GO:0097680":null,"GO:2001033":null,"GO:2001034":null}}


id: FYPO:0000898
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrial fusion, the merging of two or more separate mitochondria into a single compartment, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["GO:0008053","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal mitochondrial fusion","synonyms":[{"name":"normal mitochondrial fusion during mitotic cell cycle","type":"related"},{"name":"normal mitochondrial fusion during vegetative growth","type":"exact"}],"termid":"FYPO:0000898"}


id: MONDO:0007822
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete incisors, long upper central (obsolete MONDO:0007822)","secondary_identifiers":["OMIM:147300"],"synonyms":[{"name":"incisors, long upper central","type":"exact"}],"termid":"MONDO:0007822","xrefs":{"Monarch":{"xref_id":"0007822"}}}


id: PBO:0054064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1411","termid":"PBO:0054064"}


id: PBO:0040717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAF chromatin remodeling complex subunit BCL7C","termid":"PBO:0040717"}


id: PBO:0069416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 678, pseudogene","termid":"PBO:0069416"}


id: PBO:0001951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Ace2","termid":"PBO:0001951"}


id: PBO:0087077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L38; homologous to mammalian ribosomal protein L38, no bacterial homolog","termid":"PBO:0087077"}


id: PBO:0041997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 43","termid":"PBO:0041997"}


id: MONDO:1012829
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ichthyosis that occurs in cattle due to a mutation in the DSP gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"ichthyosis, cattle","termid":"MONDO:1011541"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ichthyosis, DSP-related, cattle","secondary_identifiers":["OMIA:002243-9913"],"termid":"MONDO:1012829","xrefs":{"Monarch":{"xref_id":"1012829"}}}


id: GO:0016227
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: L-cysteine + 'activated' tRNA = L-serine + tRNA containing a thionucleotide.","definition_xrefs":["EC:2.8.1.4"],"gene_count":0,"genotype_count":0,"name":"obsolete tRNA sulfurtransferase activity (obsolete GO:0016227)","synonyms":[{"name":"L-cysteine:tRNA sulfurtransferase activity","type":"related"},{"name":"RNA sulfurtransferase activity","type":"related"},{"name":"ribonucleate sulfurtransferase activity","type":"related"},{"name":"tRNA sulfurtransferase activity","type":"exact"},{"name":"tRNA sulphurtransferase activity","type":"exact"},{"name":"transfer RNA sulfurtransferase activity","type":"related"},{"name":"transfer RNA thiolase activity","type":"related"},{"name":"transfer ribonucleate sulfurtransferase activity","type":"related"}],"termid":"GO:0016227"}


id: PR:P41410
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA repair and recombination protein RAD54-like that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01537","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein rhp54 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15A10.03c","secondary_identifiers":["UniProtKB:P41410"],"synonyms":[{"name":"RAD54 homolog 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-RAD54L","type":"exact"}],"termid":"PR:P41410"}


id: MONDO:0006916
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Abdominal symptoms after removal of the gallbladder. The common postoperative symptoms are often the same as those present before the operation, such as colic, bloating, nausea, and vomiting. There is pain on palpation of the right upper quadrant and sometimes jaundice. The term is often used, inaccurately, to describe such postoperative symptoms not due to gallbladder removal.","definition_xrefs":["MESH:D017562"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biliary tract disorder","termid":"MONDO:0004868"},{"relation_name":"is_a","term_name":"urinary bladder disorder","termid":"MONDO:0006026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"postcholecystectomy syndrome","secondary_identifiers":["ICD9:576.0","UMLS:C0152099","icd11.foundation:157319976","EFO:1001117","ICD10CM:K91.5","DOID:9740","MEDGEN:101815","SCTID:90782003"],"termid":"MONDO:0006916","xrefs":{"Monarch":{"xref_id":"0006916"}}}


id: MOD:00857
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-alaninium (protonated L-alanine) residue to an N,N,N-trimethyl-L-alanine.","definition_xrefs":["PubMed:12590383","PubMed:332162","PubMed:3979397","PubMed:6778808","PubMed:7715456","Unimod:37#A"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"protonated L-alanine (L-alaninium) residue","termid":"MOD:00856"},{"relation_name":"is_a","term_name":"alpha-amino trimethylated residue","termid":"MOD:01687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N,N,N-trimethyl-L-alanine (from L-alaninium)","synonyms":[{"name":"N2Me3Ala","type":"exact"}],"termid":"MOD:00857"}


id: PBO:0050933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon alpha 2","termid":"PBO:0050933"}


id: GO:0018063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The linkage of cytochromes and other heme proteins to heme.","definition_xrefs":["RESID:AA0135","RESID:AA0134"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-heme linkage","termid":"GO:0017003"},{"relation_name":"is_a","term_name":"cytochrome complex assembly","termid":"GO:0017004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"cytochrome c-heme linkage","synonyms":[{"name":"cytochrome c-haem linkage","type":"exact"}],"termid":"GO:0018063"}


id: GO:0034577
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: N-isopropylacetanilide + 1/2 O2 = acetanilide + acetone.","definition_xrefs":["UM-BBD_reactionID:r0914"],"gene_count":0,"genotype_count":0,"name":"obsolete N-isopropylacetaniline monooxygenase activity (obsolete GO:0034577)","termid":"GO:0034577"}


id: GO:0010734
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of protein glutathionylation. Protein glutathionylation is the protein modification process in which a glutathione molecule is added to a protein amino acid through a disulfide linkage.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein glutathionylation","termid":"GO:0010732"},{"relation_name":"is_a","term_name":"negative regulation of protein modification process","termid":"GO:0031400"},{"relation_name":"negatively_regulates","term_name":"protein glutathionylation","termid":"GO:0010731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein glutathionylation","synonyms":[{"name":"negative regulation of protein amino acid glutathionylation","type":"exact"}],"termid":"GO:0010734"}


id: MONDO:0004698
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma in situ involving a intestine.","definition_xrefs":["MONDO:patterns/carcinoma_in_situ"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in situ carcinoma","termid":"MONDO:0004647"},{"relation_name":"is_a","term_name":"intestinal cancer","termid":"MONDO:0005814"},{"relation_name":"is_a","term_name":"digestive system carcinoma","termid":"MONDO:0006181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"intestine carcinoma in situ","secondary_identifiers":["MEDGEN:672856","SCTID:92617001","DOID:9024","UMLS:C0685941","ICD9:230.7"],"synonyms":[{"name":"carcinoma in situ of intestine","type":"exact"},{"name":"intestine in situ carcinoma","type":"exact"},{"name":"stage 0 intestine carcinoma","type":"exact"}],"termid":"MONDO:0004698","xrefs":{"Monarch":{"xref_id":"0004698"}}}


id: GO:1904196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of granulosa cell proliferation.","definition_xrefs":["GOC:TermGenie","PMID:22383759","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell proliferation","termid":"GO:0050680"},{"relation_name":"is_a","term_name":"regulation of granulosa cell proliferation","termid":"GO:1904195"},{"relation_name":"negatively_regulates","term_name":"granulosa cell proliferation","termid":"GO:1990739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of granulosa cell proliferation","synonyms":[{"name":"down regulation of granulosa cell proliferation","type":"exact"},{"name":"down-regulation of granulosa cell proliferation","type":"exact"},{"name":"downregulation of granulosa cell proliferation","type":"exact"},{"name":"inhibition of granulosa cell proliferation","type":"narrow"}],"termid":"GO:1904196"}


id: GO:0042278
data:
  {"annotated_genes":["SJAG_02959","SJAG_03881","SJAG_06634","SJAG_03096","SJAG_00885","SJAG_02580","SJAG_02582","SJAG_00044","SJAG_01070","SJAG_00957","SJAG_04927","SJAG_01359","SJAG_00134","SJAG_01859"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109093],"is_not":false,"summary":null,"term":"GO:0042278"},{"annotations":[90694],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046086"},{"annotations":[89399,89400],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006154"},{"annotations":[92358],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046085"},{"annotations":[118700],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006169"},{"annotations":[71651],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006190"},{"annotations":[77005,114028,92887],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006152"},{"annotations":[67896,75179,62567,95570],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006166"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving one of a family of organic molecules consisting of a purine base covalently bonded to a sugar ribose (a ribonucleoside) or deoxyribose (a deoxyribonucleoside).","definition_xrefs":["GOC:jl","ISBN:0140512713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside metabolic process","termid":"GO:0009116"},{"relation_name":"is_a","term_name":"purine-containing compound metabolic process","termid":"GO:0072521"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00134":null,"SJAG_00885":null,"SJAG_00957":null,"SJAG_01070":null,"SJAG_01359":null,"SJAG_01859":null,"SJAG_02580":null,"SJAG_02582":null,"SJAG_02959":null,"SJAG_03096":null,"SJAG_03881":null,"SJAG_04927":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"purine nucleoside metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000107":null},"synonyms":[{"name":"purine metabolic process","type":"broad"},{"name":"purine metabolism","type":"broad"},{"name":"purine nucleoside metabolism","type":"exact"}],"termid":"GO:0042278","terms_by_termid":{"GO:0006152":null,"GO:0006154":null,"GO:0006166":null,"GO:0006169":null,"GO:0006190":null,"GO:0042278":null,"GO:0046085":null,"GO:0046086":null}}


id: PBO:0061370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 30","termid":"PBO:0061370"}


id: PBO:0057907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3610","termid":"PBO:0057907"}


id: PBO:0017495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyketide cyclase SnoaL-like domain protein","termid":"PBO:0017495"}


id: PBO:0090102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex TPR lobe subcomplex subunit Apc8","termid":"PBO:0090102"}


id: PBO:0027298
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_primary_amine_oxidase_activity","termid":"PBO:0027298"}


id: GO:0043322
data:
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id: PBO:0091807
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. japonicus rsv1","termid":"PBO:0091807"}


id: FYPO:0002986
data:
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id: GO:0047063
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id: PBO:0049945
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HID1 domain containing","termid":"PBO:0049945"}


id: GO:0061982
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id: MONDO:0012849
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id: PBO:0053198
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphatic endothelial transcriptional regulator lncRNA 1","termid":"PBO:0053198"}


id: PBO:0052897
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 10-8","termid":"PBO:0052897"}


id: PR:O94700
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An endothelial differentiation-related factor 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02913","PRO:DNx","PANTHER:PTHR10245:SF1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiprotein-bridging factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC83.17","secondary_identifiers":["UniProtKB:O94700"],"synonyms":[{"name":"Spom972h-EDF1","type":"exact"}],"termid":"PR:O94700"}


id: MONDO:0014998
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital glaucoma","termid":"MONDO:0020366"},{"relation_name":"is_a","term_name":"TEK-related primary glaucoma","termid":"MONDO:0800182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"glaucoma 3, primary congenital, E","secondary_identifiers":["GARD:18227","UMLS:C4310639","MEDGEN:934606","OMIM:617272"],"synonyms":[{"name":"GLC3E","type":"exact"},{"name":"glaucoma 3, primary congenital, E","type":"exact"},{"name":"glaucoma 3, primary congenital, E; GLC3E","type":"exact"},{"name":"glaucoma 3, primary congenital, type E","type":"exact"}],"termid":"MONDO:0014998","xrefs":{"Monarch":{"xref_id":"0014998"}}}


id: PBO:0090808
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymidylate synthase / phosphopantothenoylcysteine decarboxylase / protein phosphatase inhibitor moonlighting protein Hal3/Tds1","termid":"PBO:0090808"}


id: PBO:0069503
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 770, pseudogene","termid":"PBO:0069503"}


id: GO:0010136
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id: PBO:0091771
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id: PBO:0030097
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id: PBO:0052746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 38","termid":"PBO:0052746"}


id: PBO:0054012
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1342","termid":"PBO:0054012"}


id: MONDO:0015077
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  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete adrenal/paraganglial tumor (obsolete MONDO:0015077)","termid":"MONDO:0015077","xrefs":{"Monarch":{"xref_id":"0015077"}}}


id: PBO:0030882
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_membrane_organization_during_vegetative_growth","termid":"PBO:0030882"}


id: MONDO:1010360
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dacryocystitis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of orbital region, non-human animal","termid":"MONDO:1011315"},{"relation_name":"is_a","term_name":"disorder of visual system, non-human animal","termid":"MONDO:1011316"},{"relation_name":"is_a","term_name":"inflammatory disease, non-human animal","termid":"MONDO:1011327"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dacryocystitis, non-human animal","secondary_identifiers":["OMIA:002610"],"termid":"MONDO:1010360","xrefs":{"Monarch":{"xref_id":"1010360"}}}


id: MONDO:0100182
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id: PR:P78954
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tif45 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P78954"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4E-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16E8.15","synonyms":[{"name":"Spom972h-tif45","type":"exact"},{"name":"eIF-4E-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eIF-4F 25 kDa subunit 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eIF4E-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mRNA cap-binding protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78954"}


id: SO:0000910
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene whose predicted amino acid sequence is unsupported by any experimental evidence or by any match with any other known sequence.","direct_ancestors":[{"relation_name":"is_a","term_name":"predicted","termid":"SO:0000732"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orphan","termid":"SO:0000910"}


id: PBO:0029470
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_monosaccharide_binding","termid":"PBO:0029470"}


id: GO:0035669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to a toll-like receptor 4 where the TRAM adaptor mediates transduction of the signal. Toll-like 4 receptors are pattern recognition receptors that bind bacterial lipopolysaccharide (LPS) to initiate an innate immune response.","definition_xrefs":["PMID:18297073","PMID:14556004","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toll-like receptor 4 signaling pathway","termid":"GO:0034142"},{"relation_name":"is_a","term_name":"TRAM-dependent toll-like receptor signaling pathway","termid":"GO:0035668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"TRAM-dependent toll-like receptor 4 signaling pathway","synonyms":[{"name":"TRAM-dependent TLR4 signaling pathway","type":"exact"},{"name":"TRAM-dependent toll-like receptor 4 signalling pathway","type":"exact"}],"termid":"GO:0035669"}


id: GO:0072219
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric cortical collecting duct over time, from its formation to the mature structure. The metanephric cortical collecting duct is the portion of the metanephric collecting duct that resides in the renal cortex.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cortical collecting duct development","termid":"GO:0072059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric cortical collecting duct development","termid":"GO:0072219"}


id: GO:0010981
data:
  {"annotated_genes":["SJAG_04666","SJAG_01255","SJAG_00610","SJAG_00424","SJAG_04462","SJAG_04659","SJAG_02278","SJAG_01787","SJAG_04771","SJAG_04668","SJAG_03705"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94234,89326],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140748"},{"annotations":[107174,107745,69409,119771,119904,94218,92583],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090334"},{"annotations":[96756,104671,91254,94240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of cell wall macromolecule metabolism. Cell wall macromolecule metabolic processes are the chemical reactions and pathways involving macromolecules forming, or destined to form, part of the cell wall. A cell wall is a rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal and most prokaryotic cells, maintaining their shape and protecting them from osmotic lysis.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macromolecule metabolic process","termid":"GO:0060255"},{"relation_name":"regulates","term_name":"cell wall macromolecule metabolic process","termid":"GO:0044036"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00610":null,"SJAG_01255":null,"SJAG_01787":null,"SJAG_02278":null,"SJAG_03705":null,"SJAG_04462":null,"SJAG_04659":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell wall macromolecule metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0010981","terms_by_termid":{"GO:0070610":null,"GO:0090334":null,"GO:0140748":null}}


id: GO:1903792
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of anion transport.","definition_xrefs":["GOC:TermGenie","PMID:11336802","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of monoatomic ion transport","termid":"GO:0043271"},{"relation_name":"is_a","term_name":"regulation of monoatomic anion transport","termid":"GO:0044070"},{"relation_name":"negatively_regulates","term_name":"monoatomic anion transport","termid":"GO:0006820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of monoatomic anion transport","synonyms":[{"name":"down regulation of anion transport","type":"exact"},{"name":"down-regulation of anion transport","type":"exact"},{"name":"downregulation of anion transport","type":"exact"},{"name":"inhibition of anion transport","type":"narrow"},{"name":"negative regulation of anion transport","type":"broad"}],"termid":"GO:1903792"}


id: PBO:0029376
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_double-strand_break_processing","termid":"PBO:0029376"}


id: GO:0038078
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: a phosphorylated MAP kinase + H2O = a MAP kinase + phosphate, where the MAP kinase (MAPK) is part of a MAPK signaling cascade that contributes to an innate immune response.","definition_xrefs":["GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete MAP kinase phosphatase activity involved in regulation of innate immune response (obsolete GO:0038078)","synonyms":[{"name":"MAPK phosphatase activity involved in regulation of innate immune response","type":"exact"}],"termid":"GO:0038078"}


id: PATO:0000833
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000833 absolute visual threshold value (obsolete PATO:0000833)","termid":"PATO:0000833"}


id: MONDO:0016868
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndrome caused by partial chromosomal deletion","termid":"MONDO:0000761"},{"relation_name":"is_a","term_name":"chromosome 3 disorder","termid":"MONDO:0700010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial deletion of chromosome 3","secondary_identifiers":["MEDGEN:1826012","Orphanet:261776","UMLS:C5679651","GARD:20791"],"synonyms":[{"name":"partial deletion of chromosome type 3","type":"exact"},{"name":"partial monosomy of chromosome 3","type":"exact"}],"termid":"MONDO:0016868","xrefs":{"Monarch":{"xref_id":"0016868"}}}


id: FYPO:0000793
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glycerol dehydrogenase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000707","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"abnormal glycerol dehydrogenase activity","termid":"FYPO:0000793"}


id: PBO:0087142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding protein that modulates mRNA stability; regulates genes involved in cell cycle, sister chromatid cohesion, and stress response; modulates stability and translational efficiency of CLN3 mRNA; colocalizes with P-bodies/stress granules where it may sequester specific mRNAs; regulates cell fate and critical cell size required for passage through Start; regulates ploidy; forms aggregates in older cells, leading to sterility","termid":"PBO:0087142"}


id: MONDO:0013750
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any atrial heart septal defect in which the cause of the disease is a mutation in the CITED2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrial septal defect","termid":"MONDO:0006664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"atrial septal defect 8","secondary_identifiers":["UMLS:C3280790","MEDGEN:482420","DOID:0110113","OMIM:614433"],"synonyms":[{"name":"ASD8","type":"exact"},{"name":"CITED2 atrial heart septal defect","type":"exact"},{"name":"atrial heart septal defect caused by mutation in CITED2","type":"exact"},{"name":"atrial heart septal defect type 8","type":"exact"},{"name":"atrial septal defect 8","type":"exact"},{"name":"atrial septal defect type 8","type":"exact"}],"termid":"MONDO:0013750","xrefs":{"Monarch":{"xref_id":"0013750"}}}


id: PBO:0013843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OPT oligopeptide transporter family protein Opt3","termid":"PBO:0013843"}


id: MONDO:0021745
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A growth disorder that is observed between the ages of 2 and 15, caused by extreme emotional deprivation or stress.","definition_xrefs":["Wikipedia:Psychosocial_short_stature"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental disability","termid":"MONDO:0005287"},{"relation_name":"is_a","term_name":"pituitary dwarfism","termid":"MONDO:0006909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"psychosocial short stature","secondary_identifiers":["UMLS:C1455735","icd11.foundation:2088216390","MEDGEN:264104","SCTID:39465007","MESH:C535569"],"synonyms":[{"name":"Kaspar Hauser syndrome","type":"related"},{"name":"abuse dwarfism syndrome","type":"related"},{"name":"child abuse dwarfism","type":"related"},{"name":"psychosocial dwarfism","type":"related"}],"termid":"MONDO:0021745","xrefs":{"Monarch":{"xref_id":"0021745"}}}


id: MONDO:0037860
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare systemic or rheumatologic disease (obsolete MONDO:0037860)","secondary_identifiers":["Orphanet:98023"],"termid":"MONDO:0037860","xrefs":{"Monarch":{"xref_id":"0037860"}}}


id: GO:2001271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of cysteine-type endopeptidase activity involved in execution phase of apoptosis.","definition_xrefs":["GOC:mtg_apoptosis"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cysteine-type endopeptidase activity involved in execution phase of apoptosis (obsolete GO:2001271)","synonyms":[{"name":"negative regulation of effector caspase activity","type":"narrow"}],"termid":"GO:2001271"}


id: PBO:0090823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIID complex subunit Taf13","termid":"PBO:0090823"}


id: PBO:0068820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 58, pseudogene","termid":"PBO:0068820"}


id: FYPO:0009006
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell enters the meiotic cell cycle without either of the normal steps that precede it: conjugation with cellular fusion and karyogamy with nuclear fusion.","definition_xrefs":["PMID:36650056","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle","termid":"FYPO:0000052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal meiotic cell cycle entry","termid":"FYPO:0009006"}


id: GO:0044199
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The double lipid bilayer that encloses the host cell nucleus, separating its contents from the cytoplasm. It consists of an inner and outer nuclear membrane, with an intermembrane space (20-40 nm wide, also called the perinuclear space) between them. The envelope is supported by the nuclear lamina and contains nuclear pore complexes, which regulate molecular transport.","definition_xrefs":["GOC:jl","GOC:rynl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell nuclear part","termid":"GO:0044094"},{"relation_name":"part_of","term_name":"host cell endomembrane system","termid":"GO:0033645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell nuclear envelope","termid":"GO:0044199"}


id: PBO:0076946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroglobulin","termid":"PBO:0076946"}


id: FYPO:0006655
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the unwinding of G-quadruplex DNA structures does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome organization","termid":"FYPO:0000641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000641","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished G-quadruplex DNA unwinding","synonyms":[{"name":"G-quadruplex DNA unwinding abolished","type":"exact"},{"name":"abolished G-quadruplex DNA unwinding during mitotic cell cycle","type":"related"},{"name":"abolished G-quadruplex DNA unwinding during vegetative growth","type":"exact"},{"name":"abolished G-quartet DNA unwinding","type":"exact"},{"name":"abolished G4 DNA unwinding","type":"exact"}],"termid":"FYPO:0006655"}


id: GO:0009493
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete adrenodoxin-type ferredoxin (obsolete GO:0009493)","synonyms":[{"name":"adrenodoxin-type ferredoxin","type":"exact"}],"termid":"GO:0009493"}


id: GO:0097253
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of beta-hydroxybutyrate from one side of a membrane to the other. Beta-hydroxybutyrate is the conjugate base of (R)-3-hydroxybutyric acid.","definition_xrefs":["PMID:22302940","GOC:dsf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid transmembrane transporter activity","termid":"GO:0015245"},{"relation_name":"is_a","term_name":"alcohol transmembrane transporter activity","termid":"GO:0015665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"beta-hydroxybutyrate transmembrane transporter activity","synonyms":[{"name":"(R)-3-hydroxybutyrate transmembrane transporter activity","type":"exact"},{"name":"3-hydroxybutanoic acid transmembrane transporter activity","type":"exact"}],"termid":"GO:0097253"}


id: SO:0000887
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Recoding by frameshifting a particular site.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recoded","termid":"SO:0000881"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translationally_frameshifted","synonyms":[{"name":"translationally frameshifted","type":"exact"}],"termid":"SO:0000887"}


id: MONDO:0005527
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of neurologic disorders caused by damage to the nervous system following exposure to pharmacologic, biologic, and chemical agents. Examples of neurotoxins include chemotherapy agents, radiation treatment, heavy metals, pesticides, and food additives.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toxic encephalopathy","secondary_identifiers":["ICD9:349.82","SCTID:28394000","Wikipedia:Toxic_encephalopathy","EFO:0005595","MESH:D020258","DOID:3602","NCIT:C27961","ICD10CM:G92"],"synonyms":[{"name":"neurotoxicity","type":"exact"},{"name":"neurotoxicity syndrome","type":"exact"},{"name":"neurotoxicity syndromes","type":"related"}],"termid":"MONDO:0005527","xrefs":{"Monarch":{"xref_id":"0005527"}}}


id: PBO:0083951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gamma subunit of the translation initiation factor eIF2B; the guanine-nucleotide exchange factor for eIF2; activity subsequently regulated by phosphorylated eIF2; first identified as a negative regulator of GCN4 expression","termid":"PBO:0083951"}


id: PBO:0071648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 12","termid":"PBO:0071648"}


id: SO:0002325
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A splice_donor_variant (SO:0001575) that is degraded by nonsense-mediated decay (NMD).","definition_xrefs":["GenCC:AR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splice_donor_variant","termid":"SO:0001575"},{"relation_name":"is_a","term_name":"NMD_triggering_variant","termid":"SO:0002319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splice_donor_variant_NMD_triggering","synonyms":[{"name":"splice donor variant-NMD triggering","type":"exact"},{"name":"splice donor variant-nonsense-mediated decay triggering","type":"exact"}],"termid":"SO:0002325"}


id: PBO:0040969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 40","termid":"PBO:0040969"}


id: PR:Q92348
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug183 gene.","definition_xrefs":["UniProtKB:Q92348","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 183 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G9.03c","synonyms":[{"name":"Spom972h-mug183","type":"exact"}],"termid":"PR:Q92348"}


id: PBO:0047248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 238 member B","termid":"PBO:0047248"}


id: PBO:0057001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 93","termid":"PBO:0057001"}


id: PBO:0074537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synuclein alpha","termid":"PBO:0074537"}


id: PBO:0048684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLI family zinc finger 3","termid":"PBO:0048684"}


id: GO:0090693
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A plant organ developmental process during which a plant dismantles cellular components to reclaim the cellular building blocks and nutrients that have been deposited in the plant organs during growth.","definition_xrefs":["PMID:17177638","GOC:tb","PMID:34938309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process","termid":"GO:0032502"},{"relation_name":"part_of","term_name":"plant organ development","termid":"GO:0099402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plant organ senescence","termid":"GO:0090693"}


id: PR:Q10325
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mst2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone acetyltransferase mst2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G8.13c","synonyms":[{"name":"Spom972h-mst2","type":"exact"}],"termid":"PR:Q10325"}


id: PBO:0043586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type XVIII alpha 1 chain","termid":"PBO:0043586"}


id: PBO:0067761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 61","termid":"PBO:0067761"}


id: GO:0048241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of epinephrine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"catecholamine transport","termid":"GO:0051937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"epinephrine transport","synonyms":[{"name":"adrenaline transport","type":"exact"}],"termid":"GO:0048241"}


id: PBO:0059435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane spanning 4-domains A5","termid":"PBO:0059435"}


id: PBO:0073498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small G protein signaling modulator 3","termid":"PBO:0073498"}


id: PBO:0087318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-methylmethionine-homocysteine methyltransferase; functions along with Sam4p in the conversion of S-adenosylmethionine (AdoMet) to methionine to control the methionine/AdoMet ratio","termid":"PBO:0087318"}


id: MONDO:0027751
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete serpinopathy with loss of serpin function (obsolete MONDO:0027751)","secondary_identifiers":["Orphanet:250811"],"termid":"MONDO:0027751","xrefs":{"Monarch":{"xref_id":"0027751"}}}


id: MONDO:0011348
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital anomaly of the hand or foot, marked by the presence of supernumerary digits.","definition_xrefs":["MESH:D017689"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polydactyly","termid":"MONDO:0021003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-syndromic polydactyly","secondary_identifiers":["MedDRA:10036063","Orphanet:2913","icd11.foundation:1534380955"],"synonyms":[{"name":"Extra digits","type":"related"},{"name":"isolated polydactyly","type":"related"},{"name":"isolated polydactyly (disease)","type":"exact"},{"name":"nonsyndromic polydactyly","type":"exact"},{"name":"nonsyndromic polydactyly (disease)","type":"exact"},{"name":"polydactylia","type":"related"},{"name":"supernumerary digits","type":"related"}],"termid":"MONDO:0011348","xrefs":{"Monarch":{"xref_id":"0011348"}}}


id: PR:O94560
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- far8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94560"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C1773.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1773.01","synonyms":[{"name":"Spom972h-far8","type":"exact"}],"termid":"PR:O94560"}


id: PBO:0086913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative Y' element ATP-dependent helicase; YLL066C is not an essential gene","termid":"PBO:0086913"}


id: PBO:0056925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myo-inositol oxygenase","termid":"PBO:0056925"}


id: RO:0002092
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","direct_ancestors":[{"relation_name":"is_a","term_name":"ends_during","termid":"RO:0002093"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"happens_during","termid":"RO:0002092"}


id: PBO:0044032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CSPG4 pseudogene 1 Y-linked","termid":"PBO:0044032"}


id: PBO:0075132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNRNP40 pseudogene 1","termid":"PBO:0075132"}


id: GO:0047824
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-iditol + NAD+ = D-sorbose + NADH.","definition_xrefs":["RHEA:12725"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"},{"relation_name":"is_a","term_name":"hexitol dehydrogenase activity","termid":"GO:0031320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"D-iditol 2-dehydrogenase activity","secondary_identifiers":["MetaCyc:D-IDITOL-2-DEHYDROGENASE-RXN"],"termid":"GO:0047824"}


id: PATO:0002187
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Polar polarity is a quality that inheres in a molecular entity when the molecular entity is polar, i.e. does possess an electric dipole.","definition_xrefs":["PATOC:JH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polarity","termid":"PATO:0002186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polar polarity","termid":"PATO:0002187"}


id: MONDO:0023076
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Eosinophilic pustular folliculitis (EPF) is a skin disorder characterized by recurring itchy, red or skin-colored bumps and pustules (bumps containing pus). The condition is named after the fact that skin biopsies of this disorder find eosinophils (a type of immune cell) around hair follicles. The papules mostly appear on the face, scalp, neck and trunk and may persist for weeks or months. EPF affects males more than females.There are several variants of EPF includingclassic eosinophilic pustular folliculitis (mainly occurring in adults in Japan); HIV-associated EPF, also referred to as immunosuppression-associated EPF; and infantile EPF (with onset from birth or within the first year of life). Whether these are distinct disorders rather than variants of one disorder is controversial, partly because the underlying cause of EFP is not known.Several treatments have been described with variable results, including various oral or topical medications and phototherapy. In patients with HIV-associated disease, antiretroviral therapy tends to greatly diminish symptoms or even eliminate the condition.","definition_xrefs":["GARD:0008534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"folliculitis","termid":"MONDO:0006552"},{"relation_name":"is_a","term_name":"vesiculobullous skin disease","termid":"MONDO:0006617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"eosinophilic pustular folliculitis","secondary_identifiers":["UMLS:C0406305","MESH:C535953","ICD9:704.8","icd11.foundation:1653155576","MEDGEN:140800","GARD:8534","SCTID:95333004"],"synonyms":[{"name":"EPF","type":"related"},{"name":"Ofuji disease","type":"related"},{"name":"Ofuji's disease","type":"related"},{"name":"eosinophilic folliculitis","type":"related"},{"name":"eosinophilic folliculitis, pustular","type":"related"}],"termid":"MONDO:0023076","xrefs":{"Monarch":{"xref_id":"0023076"}}}


id: PBO:0091838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall glucan 1,6-beta-glucosidase Exg1","termid":"PBO:0091838"}


id: GO:0031989
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by a bombesin binding to its receptor, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"bombesin receptor signaling pathway","synonyms":[{"name":"bombesin receptor signalling pathway","type":"exact"}],"termid":"GO:0031989"}


id: FYPO:0005984
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to the dye Congo Red. Cells stop growing (and may die) at a concentration of Congo Red that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002683","FYPO:0001985","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to Congo Red","synonyms":[{"name":"hypersensitive to Congo Red","type":"exact"},{"name":"sensitive to Congo Red during mitotic cell cycle","type":"related"},{"name":"sensitive to Congo Red during vegetative growth","type":"exact"}],"termid":"FYPO:0005984"}


id: PBO:0052966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LINE1 type transposase domain containing 1","termid":"PBO:0052966"}


id: PBO:0005224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"separase/separin","termid":"PBO:0005224"}


id: PR:O94520
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- emc4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94520"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein complex subunit 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1281.03c","synonyms":[{"name":"Spom972h-emc4","type":"exact"}],"termid":"PR:O94520"}


id: PBO:0048169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G2E3 antisense RNA 1","termid":"PBO:0048169"}


id: PBO:0011056
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_direct_input","termid":"PBO:0011056"}


id: GO:0052625
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-aminobenzoate + L-glutamate + ATP = N-(4-aminobenzoyl)-L-glutamate + AMP + diphosphate + H+.","definition_xrefs":["MetaCyc:RXN-10884","PMID:19189963"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"N-(4-aminobenzoyl)-L-glutamate synthetase activity","synonyms":[{"name":"4-aminobenzoate amino acid synthetase activity","type":"broad"},{"name":"4-aminobenzoyl amino acid synthetase activity","type":"exact"},{"name":"p-aminobenzoate amino acid synthetase activity","type":"exact"},{"name":"p-aminobenzoyl amino acid synthetase activity","type":"exact"},{"name":"pABA amino acid synthetase activity","type":"exact"}],"termid":"GO:0052625"}


id: MONDO:0001814
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete patent ductus arteriosus (obsolete MONDO:0001814)","termid":"MONDO:0001814","xrefs":{"Monarch":{"xref_id":"0001814"}}}


id: GO:0090317
data:
  {"annotated_genes":["SJAG_01311"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107640],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042308"}]},"cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the directed movement of proteins within cells.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intracellular transport","termid":"GO:0032387"},{"relation_name":"is_a","term_name":"regulation of intracellular protein transport","termid":"GO:0033157"},{"relation_name":"is_a","term_name":"negative regulation of protein transport","termid":"GO:0051224"},{"relation_name":"negatively_regulates","term_name":"intracellular protein transport","termid":"GO:0006886"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01311":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of intracellular protein transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0090317","terms_by_termid":{"GO:0042308":null}}


id: PBO:0062075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 6 pseudogene","termid":"PBO:0062075"}


id: GO:0090724
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The center of the migrating motile tip of a growing nerve cell axon or dendrite.","definition_xrefs":["GOC:sl","PMID:16260607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"growth cone","termid":"GO:0030426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"central region of growth cone","termid":"GO:0090724"}


id: GO:1902530
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein linear polyubiquitination.","definition_xrefs":["GOC:TermGenie","PMID:21931591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein linear polyubiquitination","termid":"GO:1902528"},{"relation_name":"is_a","term_name":"positive regulation of protein polyubiquitination","termid":"GO:1902916"},{"relation_name":"positively_regulates","term_name":"protein linear polyubiquitination","termid":"GO:0097039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"positive regulation of protein linear polyubiquitination","synonyms":[{"name":"activation of M1 linkage","type":"narrow"},{"name":"activation of protein linear polyubiquitination","type":"narrow"},{"name":"positive regulation of M1 linkage","type":"narrow"},{"name":"up regulation of M1 linkage","type":"narrow"},{"name":"up regulation of protein linear polyubiquitination","type":"exact"},{"name":"up-regulation of M1 linkage","type":"narrow"},{"name":"up-regulation of protein linear polyubiquitination","type":"exact"},{"name":"upregulation of M1 linkage","type":"narrow"},{"name":"upregulation of protein linear polyubiquitination","type":"exact"}],"termid":"GO:1902530"}


id: GO:0008678
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-deoxy-D-gluconate + NAD+ = 3-dehydro-2-deoxy-D-gluconate + NADH + H+.","definition_xrefs":["EC:1.1.1.125"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"2-deoxy-D-gluconate 3-dehydrogenase activity","secondary_identifiers":["MetaCyc:KDUD-RXN","RHEA:12160"],"synonyms":[{"name":"2-deoxy-D-gluconate:NAD+ 3-oxidoreductase activity","type":"related"},{"name":"2-deoxygluconate dehydrogenase activity","type":"related"},{"name":"2-keto-3-deoxygluconate oxidoreductase activity","type":"related"}],"termid":"GO:0008678"}


id: MOD:00432
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Covalent modification of, or a change resulting in an alteration of the measured molecular mass of, a peptide or protein amino acid residue with a secondary loss of a neutral trihydrogen phosphate molecular fragment.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified residue with a secondary neutral loss","termid":"MOD:00431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified residue with neutral loss of phosphate","synonyms":[{"name":"dPhosModRes","type":"exact"}],"termid":"MOD:00432"}


id: GO:0019769
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with low affinity with an immunoglobulin of the IgE isotype via the Fc region, and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:add","GOC:signaling","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"IgE receptor activity","termid":"GO:0019767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"low-affinity IgE receptor activity","synonyms":[{"name":"low affinity Fc receptor activity","type":"related"},{"name":"low affinity IgE receptor activity","type":"exact"}],"termid":"GO:0019769"}


id: PBO:0057311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 517b","termid":"PBO:0057311"}


id: FYPO:0005757
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to one or more membranes does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization during vegetative growth","termid":"FYPO:0001179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to membrane during vegetative growth","synonyms":[{"name":"abolished protein localisation to membrane during vegetative growth","type":"exact"},{"name":"abolished protein localization to membrane during mitotic cell cycle","type":"related"},{"name":"protein absent from membrane during vegetative growth","type":"related"},{"name":"protein localization to membrane abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0005757"}


id: MONDO:0032810
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited oocyte maturation defect","termid":"MONDO:0014769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"oocyte maturation defect 7","secondary_identifiers":["MEDGEN:1684736","OMIM:618550","UMLS:C5231407"],"synonyms":[{"name":"OOCYTE MATURATION DEFECT 7","type":"related"},{"name":"OOMD7","type":"related"}],"termid":"MONDO:0032810","xrefs":{"Monarch":{"xref_id":"0032810"}}}


id: GO:0020026
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Electron-dense organelle with a granular internal matrix found in a apicomplexan parasite; contains proteins destined to be secreted into the parasitophorous vacuole following parasite invasion of a host cell.","definition_xrefs":["GOC:mb","GOC:mtg_sensu","PMID:35302693","PMID:15978597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule","termid":"GO:0030141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"apicomplexan dense granule","synonyms":[{"name":"dense body","type":"related"}],"termid":"GO:0020026"}


id: MONDO:1010757
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acrodermatitis enteropathica that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acrodermatitis enteropathica, non-human animal","termid":"MONDO:1010133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acrodermatitis enteropathica, dog","secondary_identifiers":["OMIA:000593-9615"],"termid":"MONDO:1010757","xrefs":{"Monarch":{"xref_id":"1010757"}}}


id: GO:0004735
data:
  {"annotated_genes":["SJAG_00120"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79615],"is_not":false,"summary":null,"term":"GO:0004735"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-proline + NADP+ = 1-pyrroline-5-carboxylate + NADPH + H+.","definition_xrefs":["EC:1.5.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00120":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"pyrroline-5-carboxylate reductase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["RHEA:14109","MetaCyc:PYRROLINECARBREDUCT-RXN","Reactome:R-HSA-6783939","Reactome:R-HSA-6783955","Reactome:R-HSA-70664"],"synonyms":[{"name":"1-pyrroline-5-carboxylate reductase activity","type":"related"},{"name":"L-proline oxidase activity","type":"related"},{"name":"L-proline-NAD(P)+ 5-oxidoreductase activity","type":"related"},{"name":"L-proline:NAD(P)+ 5-oxidoreductase activity","type":"related"},{"name":"NADPH-L-delta1-pyrroline carboxylic acid reductase activity","type":"related"},{"name":"P5CR activity","type":"related"}],"termid":"GO:0004735","terms_by_termid":{"GO:0004735":null}}


id: GO:0019018
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A segmented viral genome consisting of two sub-genomic nucleic acids but each nucleic acid is packaged into a different virion.","definition_xrefs":["ISBN:0121585336"],"gene_count":0,"genotype_count":0,"name":"obsolete bipartite viral genome (obsolete GO:0019018)","termid":"GO:0019018"}


id: PBO:0004174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER oxidoreductin Ero1a","termid":"PBO:0004174"}


id: SO:1000015
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transition of an adenine to a guanine.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine_transition","termid":"SO:1000014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A_to_G_transition","synonyms":[{"name":"A to G transition","type":"exact"}],"termid":"SO:1000015"}


id: PBO:0041902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBFA2/RUNX1 partner transcriptional co-repressor 2","termid":"PBO:0041902"}


id: PBO:0055005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2420","termid":"PBO:0055005"}


id: GO:0016743
data:
  {"annotated_genes":["SJAG_00635","SJAG_00964"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73641],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004070"},{"annotations":[80232],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004585"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a carboxyl- or carbamoyl group from one compound (donor) to another (acceptor).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring one-carbon groups","termid":"GO:0016741"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00635":null,"SJAG_00964":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016741"],"is_obsolete":false,"name":"carboxyl- or carbamoyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:2.1.3.-"],"synonyms":[{"name":"carboxyl- and carbamoyltransferase activity","type":"exact"}],"termid":"GO:0016743","terms_by_termid":{"GO:0004070":null,"GO:0004585":null}}


id: MONDO:0004263
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An embryonal tumor with multilayered rosettes, C19MC-altered that arises from the infratentorial region and occurs in children.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"childhood central nervous system primitive neuroectodermal neoplasm","termid":"MONDO:0002798"},{"relation_name":"is_a","term_name":"childhood infratentorial neoplasm","termid":"MONDO:0002915"},{"relation_name":"is_a","term_name":"infratentorial cancer","termid":"MONDO:0003107"},{"relation_name":"is_a","term_name":"intracranial primitive neuroectodermal tumor","termid":"MONDO:0003142"},{"relation_name":"is_a","term_name":"ependymoblastoma","termid":"MONDO:0016715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pediatric infratentorial ependymoblastoma","secondary_identifiers":["DOID:7522","MEDGEN:272462","NCIT:C6773","UMLS:C1332972"],"synonyms":[{"name":"childhood infratentorial embryonal tumor with Multilayered Rosettes, C19MC-altered","type":"exact"},{"name":"childhood infratentorial embryonal tumour with Multilayered Rosettes, C19MC-altered","type":"exact"},{"name":"childhood infratentorial ependymoblastoma","type":"exact"},{"name":"pediatric infratentorial ependymoblastoma","type":"exact"}],"termid":"MONDO:0004263","xrefs":{"Monarch":{"xref_id":"0004263"}}}


id: GO:0036482
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals in which an intracellular signal is conveyed to trigger the apoptotic death of a neuron in response to hydrogen peroxide.","definition_xrefs":["GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron intrinsic apoptotic signaling pathway in response to oxidative stress","termid":"GO:0036480"},{"relation_name":"is_a","term_name":"intrinsic apoptotic signaling pathway in response to hydrogen peroxide","termid":"GO:0036481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"neuron intrinsic apoptotic signaling pathway in response to hydrogen peroxide","synonyms":[{"name":"H2O2-induced neuron intrinsic apoptotic signaling pathway","type":"exact"},{"name":"hydrogen peroxide-induced neuron apoptosis","type":"broad"},{"name":"hydrogen peroxide-induced neuronal apoptosis","type":"broad"},{"name":"neuron apoptosis in response to hydrogen peroxide","type":"related"},{"name":"neuron intrinsic apoptotic signaling pathway in response to H2O2","type":"exact"}],"termid":"GO:0036482"}


id: PBO:0072693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RUNX family transcription factor 3","termid":"PBO:0072693"}


id: GO:1902606
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of large conductance calcium-activated potassium channel activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:23407708"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of large conductance calcium-activated potassium channel activity (obsolete GO:1902606)","synonyms":[{"name":"regulation of BK KCa channels","type":"exact"},{"name":"regulation of BK calcium-activated potassium channel activity","type":"exact"},{"name":"regulation of BK channel activity","type":"related"},{"name":"regulation of large conductance KCa channels","type":"exact"}],"termid":"GO:1902606"}


id: PBO:0070854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13 pseudogene 7","termid":"PBO:0070854"}


id: PBO:0088718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pescadillo-family BRCT domain protein Ppp1","termid":"PBO:0088718"}


id: PBO:0051460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 8/OR8-1 (pseudogene)","termid":"PBO:0051460"}


id: PBO:0052369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 17","termid":"PBO:0052369"}


id: PBO:0047550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 8","termid":"PBO:0047550"}


id: FYPO:0005736
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which prospore membrane formation is decreased.","definition_xrefs":["PomBase:mah","PMID:27630265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal prospore membrane formation","termid":"FYPO:0001914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000121","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"decreased prospore membrane formation","synonyms":[{"name":"decreased ascospore-type prospore membrane assembly","type":"exact"},{"name":"decreased forespore membrane formation","type":"exact"},{"name":"reduced prospore membrane formation","type":"exact"}],"termid":"FYPO:0005736"}


id: PBO:0027657
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_phosphorylation_during_cellular_response_to_hydroxyurea","termid":"PBO:0027657"}


id: PBO:0089684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase P and RNase MRP subunit Pop23","termid":"PBO:0089684"}


id: GO:0008028
data:
  {"annotated_genes":["SJAG_01505","SJAG_00276","SJAG_01924","SJAG_02780","SJAG_01960","SJAG_04593","SJAG_00699","SJAG_02779"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113729],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140485"},{"annotations":[80421],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015123"},{"annotations":[80966,73527],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015225"},{"annotations":[73530,80969],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901604"},{"annotations":[78355,95154],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089721"},{"annotations":[78669,96207],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050833"}]},"cv_name":"molecular_function","definition":"Enables the transfer of monocarboxylic acids from one side of a membrane to the other. A monocarboxylic acid is an organic acid with one COOH group.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00276":null,"SJAG_00699":null,"SJAG_01505":null,"SJAG_01924":null,"SJAG_01960":null,"SJAG_02779":null,"SJAG_02780":null,"SJAG_04593":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"monocarboxylic acid transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-433698","Reactome:R-HSA-5624211","Reactome:R-HSA-429749","Reactome:R-HSA-9645220","GO:0008505"],"synonyms":[{"name":"monocarboxylate carrier","type":"narrow"},{"name":"prostaglandin/thromboxane transporter activity","type":"narrow"}],"termid":"GO:0008028","terms_by_termid":{"GO:0015123":null,"GO:0015225":null,"GO:0050833":null,"GO:0089721":null,"GO:0140485":null,"GO:1901604":null}}


id: PBO:0072827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAM domain, SH3 domain and nuclear localization signals 1","termid":"PBO:0072827"}


id: PBO:0065089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase cAMP-activated catalytic subunit beta","termid":"PBO:0065089"}


id: PBO:0070173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 87 pseudogene","termid":"PBO:0070173"}


id: GO:0006720
data:
  {"annotated_genes":["SJAG_04499","SJAG_02380","SJAG_00580","SJAG_04865","SJAG_03715","SJAG_06603","SJAG_01474","SJAG_00624","SJAG_03352","SJAG_03349","SJAG_04307","SJAG_03360","SJAG_00413","SJAG_02719","SJAG_01187","SJAG_04568","SJAG_01865","SJAG_04954"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[81863,101412,90509,103700,76044,111329,115608,108362,116766,96258],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010142"},{"annotations":[78237],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045338"},{"annotations":[111330,101413],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033386"},{"annotations":[76416],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0009240"},{"annotations":[116767,81915,76046,78908],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0019287"},{"annotations":[80548,100197],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008299"},{"annotations":[113164],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902767"},{"annotations":[117344,113227],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:2001211"},{"annotations":[62406],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016095"},{"annotations":[62587,67818],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016104"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving isoprenoid compounds, isoprene (2-methylbuta-1,3-diene) or compounds containing or derived from linked isoprene (3-methyl-2-butenylene) residues.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid metabolic process","termid":"GO:0006629"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00413":null,"SJAG_00580":null,"SJAG_00624":null,"SJAG_01187":null,"SJAG_01474":null,"SJAG_01865":null,"SJAG_02380":null,"SJAG_02719":null,"SJAG_03349":null,"SJAG_03352":null,"SJAG_03360":null,"SJAG_03715":null,"SJAG_04307":null,"SJAG_04499":null,"SJAG_04568":null,"SJAG_04865":null,"SJAG_04954":null,"SJAG_06603":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"isoprenoid metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0016096"],"synonyms":[{"name":"isoprenoid metabolism","type":"exact"},{"name":"polyisoprenoid metabolic process","type":"narrow"},{"name":"polyisoprenoid metabolism","type":"narrow"},{"name":"polyterpene metabolic process","type":"narrow"},{"name":"polyterpene metabolism","type":"narrow"}],"termid":"GO:0006720","terms_by_termid":{"GO:0008299":null,"GO:0009240":null,"GO:0010142":null,"GO:0016095":null,"GO:0016104":null,"GO:0019287":null,"GO:0033386":null,"GO:0045338":null,"GO:1902767":null,"GO:2001211":null}}


id: MONDO:0014900
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive limb-girdle muscular dystrophy type 2Y (LGMD2Y) is a form of limb-girdle muscular dystrophy, presenting in the first or second decades of life, characterized by slowly progressive proximal and distal muscle weakness and atrophy. Additional manifestations include contractures of the proximal and distal interphalangeal hand joints, rigid spine, restricted pulmonary function, and mild cardiomyopathy.","definition_xrefs":["Orphanet:424261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"autosomal recessive limb-girdle muscular dystrophy","termid":"MONDO:0015152"},{"relation_name":"is_a","term_name":"TOR1AIP1-related myopathy","termid":"MONDO:0100582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0006025","MONDO:0002320"],"is_obsolete":false,"name":"autosomal recessive limb-girdle muscular dystrophy type 2Y","secondary_identifiers":["SCTID:725907002","GARD:17708","MEDGEN:1385152","NCIT:C181000","UMLS:C4511482","DOID:0110289","OMIM:617072"],"synonyms":[{"name":"LGMD2Y","type":"exact"},{"name":"TOR1AIP1 autosomal recessive limb-girdle muscular dystrophy","type":"exact"},{"name":"autosomal recessive limb-girdle muscular dystrophy caused by mutation in TOR1AIP1","type":"exact"},{"name":"autosomal recessive muscular dystrophy due to LAP1B deficiency","type":"exact"},{"name":"autosomal recessive muscular dystrophy due to Torsin-1A-interacting protein 1 deficiency","type":"exact"},{"name":"muscular dystrophy with progressive weakness, distal contractures and rigid spine","type":"exact"},{"name":"muscular dystrophy, autosomal recessive, with rigid spine and distal joint contractures","type":"exact"},{"name":"muscular dystrophy, limb-girdle, type 2Y","type":"exact"},{"name":"muscular dystrophy, limb-girdle, type 2y","type":"exact"}],"termid":"MONDO:0014900","xrefs":{"Monarch":{"xref_id":"0014900"}}}


id: PBO:0001611
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.1.1.9","termid":"PBO:0001611"}


id: PBO:0046042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit A","termid":"PBO:0046042"}


id: MONDO:0031084
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"amelogenesis imperfecta","termid":"MONDO:0019507"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amelogenesis imperfecta, IIa 1K","secondary_identifiers":["OMIM:620104","MEDGEN:1824019","DOID:0060945","UMLS:C5774246"],"synonyms":[{"name":"AI1K","type":"exact"},{"name":"amelogenesis imperfecta, IIa 1K","type":"exact"},{"name":"amelogenesis imperfecta, hypoplastic IIa 1K","type":"exact"}],"termid":"MONDO:0031084","xrefs":{"Monarch":{"xref_id":"0031084"}}}


id: PBO:0051123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1/OR16-1 (pseudogene)","termid":"PBO:0051123"}


id: GO:1901768
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of carbapenem.","definition_xrefs":["PMID:9402024","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-lactam antibiotic catabolic process","termid":"GO:0030655"},{"relation_name":"is_a","term_name":"carbapenem metabolic process","termid":"GO:1901767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"carbapenem catabolic process","synonyms":[{"name":"carbapenem breakdown","type":"exact"},{"name":"carbapenem catabolism","type":"exact"},{"name":"carbapenem degradation","type":"exact"}],"termid":"GO:1901768"}


id: PBO:0058738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6862-2","termid":"PBO:0058738"}


id: GO:0052600
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: propane-1,3-diamine + H2O + O2 = 3-aminopropanal + NH3 + hydrogen peroxide + H+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete propane-1,3-diamine oxidase activity (obsolete GO:0052600)","termid":"GO:0052600"}


id: PBO:0048793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit alpha L","termid":"PBO:0048793"}


id: PBO:0069148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 399, pseudogene","termid":"PBO:0069148"}


id: GO:1990234
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id: PBO:0031879
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id: MONDO:0003775
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id: RO:0002490
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id: MONDO:0017339
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id: PBO:0059654
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id: PBO:0002128
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id: MONDO:0018107
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id: PBO:0085465
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id: PBO:0058906
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id: GO:1902914
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id: PBO:0065272
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id: GO:0021527
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id: PBO:0076669
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id: GO:0010335
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id: GO:0170063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a solute from the lysosomal lumen across the lysosomal membrane and into the cytosol.","definition_xrefs":["PMID:26631267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal transport","termid":"GO:0007041"},{"relation_name":"is_a","term_name":"vacuolar transmembrane transport","termid":"GO:0034486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"transmembrane transport from lysosomal lumen to cytosol","termid":"GO:0170063"}


id: PBO:0042692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDH13 antisense oligodendrocyte and neuron associated lncRNA","termid":"PBO:0042692"}


id: PBO:0043734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6C pseudogene 13","termid":"PBO:0043734"}


id: PBO:0062171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily K member 14","termid":"PBO:0062171"}


id: SO:0001033
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA belonging to the genome of a chloroplast, a photosynthetic plastid.","direct_ancestors":[{"relation_name":"has_quality","term_name":"DNA","termid":"SO:0000352"},{"relation_name":"is_a","term_name":"chloroplast_sequence","termid":"SO:0000745"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloroplast_DNA","synonyms":[{"name":"chloroplast DNA","type":"exact"}],"termid":"SO:0001033"}


id: PR:Q9UUB5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mis13 gene.","definition_xrefs":["UniProtKB:Q9UUB5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein mis13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC409.09c","synonyms":[{"name":"NMS complex subunit mis13 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-mis13","type":"exact"}],"termid":"PR:Q9UUB5"}


id: GO:0031090
data:
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The spectrum of clinical manifestations is wide and may include additional manifestations from other ectodermal, mesodermal and endodermal structures.","definition_xrefs":["Orphanet:79373"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary epidermal appendage anomaly","termid":"MONDO:0021026"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00083":null,"SJAG_00104":null,"SJAG_00159":null,"SJAG_00566":null,"SJAG_00612":null,"SJAG_00993":null,"SJAG_00995":null,"SJAG_01159":null,"SJAG_01181":null,"SJAG_01207":null,"SJAG_01235":null,"SJAG_01378":null,"SJAG_01416":null,"SJAG_01797":null,"SJAG_01836":null,"SJAG_02342":null,"SJAG_03112":null,"SJAG_03206":null,"SJAG_03249":null,"SJAG_03453":null,"SJAG_04110":null,"SJAG_04266":null,"SJAG_04454":null,"SJAG_04565":null,"SJAG_04627":null,"SJAG_04754":null,"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"ectodermal dysplasia syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:2121","MEDGEN:8544","MESH:D004476","MedDRA:10010452","GARD:6317","OMIMPS:305100","NCIT:C84683","icd11.foundation:1156567558","ICD9:757.31","SCTID:8654005","UMLS:C0013575"],"synonyms":[{"name":"congenital ectodermal defect","type":"exact"},{"name":"ectodermal dysplasia","type":"exact"},{"name":"ectodermal dysplasia (select examples)","type":"exact"}],"termid":"MONDO:0019287","terms_by_termid":{"MONDO:0007485":null,"MONDO:0009136":null,"MONDO:0009185":null,"MONDO:0009440":null,"MONDO:0010152":null,"MONDO:0010221":null,"MONDO:0010495":null,"MONDO:0010584":null,"MONDO:0010854":null,"MONDO:0011125":null,"MONDO:0012853":null,"MONDO:0013519":null,"MONDO:0013520":null,"MONDO:0013521":null,"MONDO:0013997":null,"MONDO:0014112":null,"MONDO:0014113":null,"MONDO:0014114":null,"MONDO:0014600":null,"MONDO:0014615":null,"MONDO:0014619":null,"MONDO:0014690":null,"MONDO:0014841":null,"MONDO:0030517":null,"MONDO:0030518":null,"MONDO:0031057":null,"MONDO:0032806":null},"xrefs":{"Monarch":{"xref_id":"0019287"}}}


id: PBO:0045045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dickkopf like acrosomal protein 1","termid":"PBO:0045045"}


id: GO:0003793
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any activity that plays a role in the defense/immune response of an organism against infection and disease.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete defense/immunity protein activity (obsolete GO:0003793)","synonyms":[{"name":"defence/immunity protein activity","type":"exact"},{"name":"defense/immunity protein activity","type":"exact"}],"termid":"GO:0003793"}


id: PBO:0065646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPN23 divergent transcript","termid":"PBO:0065646"}


id: GO:0098847
data:
  {"annotated_genes":["SJAG_00939","SJAG_04245","SJAG_03855","SJAG_02194","SJAG_01677","SJAG_02362","SJAG_04863","SJAG_05214"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78796],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098505"},{"annotations":[97886,109961,112223,113389,81966,82028,64278],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043047"}]},"cv_name":"molecular_function","definition":"Binding to single-stranded DNA of a specific nucleotide composition.","definition_xrefs":["PMID:9531483"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single-stranded DNA binding","termid":"GO:0003697"},{"relation_name":"is_a","term_name":"sequence-specific DNA binding","termid":"GO:0043565"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00939":null,"SJAG_01677":null,"SJAG_02194":null,"SJAG_02362":null,"SJAG_03855":null,"SJAG_04245":null,"SJAG_04863":null,"SJAG_05214":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003677"],"is_obsolete":false,"name":"sequence-specific single stranded DNA binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0098847","terms_by_termid":{"GO:0043047":null,"GO:0098505":null}}


id: GO:0106398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of R7 cell fate commitment.","definition_xrefs":["GOC:ha","PMID:22878552"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell fate commitment","termid":"GO:0010454"},{"relation_name":"is_a","term_name":"regulation of R7 cell fate commitment","termid":"GO:0106396"},{"relation_name":"negatively_regulates","term_name":"R7 cell fate commitment","termid":"GO:0007465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of R7 cell fate commitment","termid":"GO:0106398"}


id: MONDO:0016302
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dextro-looped transposition of the great arteries","termid":"MONDO:0019443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"isolated congenitally uncorrected transposition of the great arteries","secondary_identifiers":["UMLS:C5679810","GARD:20502","Orphanet:216718","MEDGEN:1842921"],"synonyms":[{"name":"isolated congenitally uncorrected transposition of the great vessels","type":"exact"}],"termid":"MONDO:0016302","xrefs":{"Monarch":{"xref_id":"0016302"}}}


id: GO:0042195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of gallate, the anion of gallic acid, in the presence of oxygen.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gallate catabolic process","termid":"GO:0019396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"aerobic gallate catabolic process","synonyms":[{"name":"aerobic gallate breakdown","type":"exact"},{"name":"aerobic gallate catabolism","type":"exact"},{"name":"aerobic gallate degradation","type":"exact"},{"name":"aerobic gallic acid catabolic process","type":"exact"},{"name":"aerobic gallic acid catabolism","type":"exact"}],"termid":"GO:0042195"}


id: PBO:0039292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG8 alpha-1,3-glucosyltransferase","termid":"PBO:0039292"}


id: GO:0047557
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-aci-nitropropanoate + H2O + O2 = 3-oxopropanoate + H2O2 + nitrite.","definition_xrefs":["EC:1.7.3.5","RHEA:22372"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, oxygen as acceptor","termid":"GO:0016663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"3-aci-nitropropanoate oxidase activity","secondary_identifiers":["KEGG_REACTION:R01609","MetaCyc:3-ACI-NITROPROPANOATE-OXIDASE-RXN"],"synonyms":[{"name":"3-aci-nitropropanoate:oxygen oxidoreductase activity","type":"related"},{"name":"propionate-3-nitronate oxidase activity","type":"related"}],"termid":"GO:0047557"}


id: GO:0090253
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic process in which the wing epithelium narrows along one axis and lengthens in a perpendicular axis that contributes to imaginal disc-derived wing morphogenesis.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"is_a","term_name":"convergent extension involved in organogenesis","termid":"GO:0060029"},{"relation_name":"part_of","term_name":"imaginal disc-derived wing morphogenesis","termid":"GO:0007476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"convergent extension involved in imaginal disc-derived wing morphogenesis","termid":"GO:0090253"}


id: MOD:02074
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-lysine residue coordinated to one or more metal atoms or metal clusters.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metal or metal cluster coordinated L-lysine residue","termid":"MOD:02074"}


id: GO:0036300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A receptor-mediated endocytosis process that results in the movement of a B cell receptor from the plasma membrane to the inside of the cell.","definition_xrefs":["GOC:amm","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor internalization","termid":"GO:0031623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"B cell receptor internalization","synonyms":[{"name":"B cell receptor uptake of antigen","type":"narrow"},{"name":"BCR endocytosis","type":"exact"},{"name":"BCR receptor internalization","type":"exact"}],"termid":"GO:0036300"}


id: PBO:0041171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTG anti-proliferation factor 4 pseudogene 1","termid":"PBO:0041171"}


id: FYPO:0000502
data:
  {"alleles_by_uniquename":{"SJAG_00871:allele-1":{"allele_type":"amino_acid_mutation","description":"cut3-T19E","gene_uniquename":"SJAG_00871","name":"cut3-T19E","uniquename":"SJAG_00871:allele-1"},"SJAG_04284:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04284","name":"nup61delta","uniquename":"SJAG_04284:allele-1"},"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[121230],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000619"}],"single_locus_phenotype":[{"annotations":[121231],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000619"},{"annotations":[121225],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003738"},{"annotations":[121324],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007701"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested under conditions where arrest does not normally occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle","termid":"FYPO:0000059"},{"relation_name":"is_a","term_name":"abnormally arrested cell cycle progression","termid":"FYPO:0000407"},{"relation_name":"is_a","term_name":"mitotic cell cycle arrest phenotype","termid":"FYPO:0004040"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00871":null,"SJAG_04284":null,"SJAG_04332":null,"SJAG_04464":null},"genotype_count":4,"genotypes_by_uniquename":{"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]},"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut3-T19E(aa) pim1-R152C(aa)","display_uniquename":"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00871:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]},"nup61delta":{"display_name":"nup61delta","display_uniquename":"nup61delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04284:allele-1","expression":"Null"}]}]},"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pim1-R152C(aa)","display_uniquename":"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_00871","SJAG_04464"],"name":"abnormally arrested mitotic cell cycle progression","references_by_uniquename":{"PMID:25866389":null,"PMID:28954740":null},"single_locus_annotated_genes":["SJAG_04284","SJAG_04464","SJAG_04332"],"single_locus_genotype_uniquenames":["nup61delta","pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal mitotic cell cycle arrest","type":"related"},{"name":"abnormally arrested mitotic cell cycle","type":"exact"},{"name":"abnormally arrested mitotic cell cycle progression during mitotic cell cycle","type":"related"},{"name":"abnormally arrested mitotic cell cycle progression during vegetative growth","type":"exact"},{"name":"mitotic cell cycle abnormally arrested","type":"exact"},{"name":"mitotic cell cycle: arrested","type":"related"}],"termid":"FYPO:0000502","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000619":null,"FYPO:0003738":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null}}


id: PBO:0005365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis ATPase, Arb family ABCF1-like (predicted)","termid":"PBO:0005365"}


id: GO:0047533
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,5-dioxopentanoate + NADP+ + H2O = 2-oxoglutarate + NADPH + H+.","definition_xrefs":["EC:1.2.1.26","MetaCyc:25-DIOXOVALERATE-DEHYDROGENASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"2,5-dioxovalerate dehydrogenase (NADP+) activity","secondary_identifiers":["RHEA:11296"],"synonyms":[{"name":"2,5-dioxopentanoate:NADP+ 5-oxidoreductase activity","type":"related"},{"name":"2-oxoglutarate semialdehyde dehydrogenase activity","type":"related"},{"name":"alpha-ketoglutaric semialdehyde dehydrogenase activity","type":"related"}],"termid":"GO:0047533"}


id: PBO:0053342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 216","termid":"PBO:0053342"}


id: MONDO:0030995
data:
  {"annotated_genes":["SJAG_03042"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87354],"is_not":false,"summary":null,"term":"MONDO:0030995"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03042":null},"genotype_count":0,"is_obsolete":false,"name":"global developmental delay with speech and behavioral abnormalities","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18541","OMIM:619243","UMLS:C5543226","MEDGEN:1787991"],"synonyms":[{"name":"GDSBA","type":"exact"}],"termid":"MONDO:0030995","terms_by_termid":{"MONDO:0030995":null},"xrefs":{"Monarch":{"xref_id":"0030995"}}}


id: PBO:0065402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 20S subunit alpha 5","termid":"PBO:0065402"}


id: MONDO:0024653
data:
  {"annotated_genes":["SJAG_03429"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88524],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009050"}]},"cv_name":"mondo","definition":"A benign or malignant neoplasm that affects the bones and structures of the skull.","definition_xrefs":["NCIT:C3375"],"direct_ancestors":[{"relation_name":"is_a","term_name":"head and neck neoplasm","termid":"MONDO:0005586"},{"relation_name":"is_a","term_name":"bone neoplasm","termid":"MONDO:0019060"},{"relation_name":"is_a","term_name":"skull disorder","termid":"MONDO:0024654"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03429":null},"genotype_count":0,"is_obsolete":false,"name":"skull neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:11457","MESH:D012888","ICD9:239.2","UMLS:C0037305","SCTID:126538005"],"synonyms":[{"name":"neoplasm of skull","type":"exact"},{"name":"neoplasm of the skull","type":"exact"},{"name":"skull neoplasm","type":"exact"},{"name":"skull tumor","type":"exact"},{"name":"skull tumour","type":"exact"},{"name":"tumor of skull","type":"exact"},{"name":"tumor of the skull","type":"exact"},{"name":"tumour of skull","type":"exact"},{"name":"tumour of the skull","type":"exact"}],"termid":"MONDO:0024653","terms_by_termid":{"MONDO:0009050":null},"xrefs":{"Monarch":{"xref_id":"0024653"}}}


id: GO:2000370
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of clathrin-mediated endocytosis.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of receptor-mediated endocytosis","termid":"GO:0048260"},{"relation_name":"is_a","term_name":"regulation of clathrin-dependent endocytosis","termid":"GO:2000369"},{"relation_name":"positively_regulates","term_name":"clathrin-dependent endocytosis","termid":"GO:0072583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of clathrin-dependent endocytosis","synonyms":[{"name":"positive regulation of clathrin coated pit-dependent endocytosis","type":"exact"},{"name":"positive regulation of clathrin-mediated endocytosis","type":"exact"}],"termid":"GO:2000370"}


id: PBO:0089642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coatomer delta subunit Ret2","termid":"PBO:0089642"}


id: GO:0071178
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of the intracellular domain of Notch4 (ICN4), the DNA-binding transcription factor RBP-Jkappa, and the transcriptional coactivator Mastermind-like-2 (MAML2); the complex is involved in transcriptional activation in response to Notch-mediated signaling.","definition_xrefs":["PMID:12370315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"MAML2-RBP-Jkappa-ICN4 complex","synonyms":[{"name":"MAML2-RBP-Jkappa-Notch4 complex","type":"exact"}],"termid":"GO:0071178"}


id: GO:0031530
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a receptor for gonadotropin-releasing hormone (GnRH), a peptide hormone that is synthesized and released by the hypothalamus and is responsible for the release of follicle-stimulating hormone (FSH) and luteinizing hormone (LH) from the anterior pituitary.","definition_xrefs":["GOC:pr","PMID:15196882"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone receptor binding","termid":"GO:0051428"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"gonadotropin-releasing hormone receptor binding","synonyms":[{"name":"GnRH receptor binding","type":"exact"},{"name":"gonadotrophin-releasing hormone receptor binding","type":"exact"}],"termid":"GO:0031530"}


id: MONDO:0030505
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"progressive familial intrahepatic cholestasis","termid":"MONDO:0015762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0005066","MONDO:0004335"],"is_obsolete":false,"name":"cholestasis, progressive familial intrahepatic, 8","secondary_identifiers":["UMLS:C5562045","OMIM:619662","MEDGEN:1794255"],"synonyms":[{"name":"PFIC8","type":"exact"}],"termid":"MONDO:0030505","xrefs":{"Monarch":{"xref_id":"0030505"}}}


id: GO:0060636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of (1->3)-beta-D-glucans.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macromolecule biosynthetic process","termid":"GO:0010558"},{"relation_name":"is_a","term_name":"regulation of (1->3)-beta-D-glucan biosynthetic process","termid":"GO:0032953"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"negatively_regulates","term_name":"(1->3)-beta-D-glucan biosynthetic process","termid":"GO:0006075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"negatively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"negative regulation of (1->3)-beta-D-glucan biosynthetic process","synonyms":[{"name":"negative regulation of 1,3-beta-D-glucan biosynthetic process","type":"exact"}],"termid":"GO:0060636"}


id: MONDO:0005367
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Physical and psychological dependence on the drug heroin.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opiate dependence","termid":"MONDO:0005530"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heroin dependence","secondary_identifiers":["UMLS:C0019337","SCTID:231477003","MEDGEN:5532","DOID:9976","EFO:0004240","icd11.foundation:443161089","MESH:D006556","NCIT:C34694"],"synonyms":[{"name":"Heroin addiction","type":"exact"}],"termid":"MONDO:0005367","xrefs":{"Monarch":{"xref_id":"0005367"}}}


id: PBO:0005032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase Gem1 (predicted)","termid":"PBO:0005032"}


id: FYPO:0000089
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to methyl methanesulfonate. Cells stop growing (and may die) at a concentration of methyl methanesulfonate that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to DNA damaging agents","termid":"FYPO:0000266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0001985","FYPO:0005447","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to methyl methanesulfonate","synonyms":[{"name":"hypersensitive to methyl methanesulfonate","type":"exact"},{"name":"sensitive to MMS","type":"exact"},{"name":"sensitive to methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"sensitive to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"sensitive to methyl methanesulphonate","type":"exact"}],"termid":"FYPO:0000089"}


id: PBO:0089162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-14 family minus-end directed microtubule motor Klp2","termid":"PBO:0089162"}


id: PBO:0059434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane spanning 4-domains A4E","termid":"PBO:0059434"}


id: PBO:0059867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotubularin related protein 4","termid":"PBO:0059867"}


id: GO:0004791
data:
  {"annotated_genes":["SJAG_03653","SJAG_04399"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74990,81372],"is_not":false,"summary":null,"term":"GO:0004791"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: thioredoxin-dithiol + NADP+ = thioredoxin-disulfide + H+ + NADPH.","definition_xrefs":["RHEA:20345"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antioxidant activity","termid":"GO:0016209"},{"relation_name":"is_a","term_name":"protein-disulfide reductase [NAD(P)H] activity","termid":"GO:0047134"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03653":null,"SJAG_04399":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0015036"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0140096","GO:0015036","GO:0003674"],"is_obsolete":false,"name":"thioredoxin-disulfide reductase (NADPH) activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R02016","Reactome:R-HSA-3323050","EC:1.8.1.9","Reactome:R-HSA-1222485","Reactome:R-HSA-9617735","MetaCyc:THIOREDOXIN-REDUCT-NADPH-RXN","Reactome:R-HSA-73646"],"synonyms":[{"name":"NADPH:oxidized thioredoxin oxidoreductase activity","type":"exact"},{"name":"thioredoxin disulfide reductase activity","type":"broad"},{"name":"thioredoxin reductase (NADPH) activity","type":"exact"},{"name":"thioredoxin-disulfide reductase (NADP) activity","type":"exact"},{"name":"thioredoxin-disulfide reductase activity","type":"broad"},{"name":"thioredoxin-disulphide reductase activity","type":"broad"}],"termid":"GO:0004791","terms_by_termid":{"GO:0004791":null}}


id: GO:1990056
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the phosphorylation of an amino acid residue in a substrate protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP, thereby targeting the substrate to the proteasomal ubiquitin mediated protein catabolic process.","definition_xrefs":["PMID:23264631","PMID:21098119","PMID:21993622"],"gene_count":0,"genotype_count":0,"name":"obsolete protein kinase activity required for targeting substrate to proteasomal ubiquitin-dependent protein catabolic process (obsolete GO:1990056)","synonyms":[{"name":"protein kinase activity required for targeting substrate to proteasomal ubiquitin-dependent protein catabolic process","type":"exact"}],"termid":"GO:1990056"}


id: PBO:0039442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKH divergent transcript","termid":"PBO:0039442"}


id: GO:0034289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a maltose stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to maltose","termid":"GO:0034286"},{"relation_name":"is_a","term_name":"detection of disaccharide stimulus","termid":"GO:0034288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of maltose stimulus","synonyms":[{"name":"perception of maltose stimulus","type":"related"}],"termid":"GO:0034289"}


id: MONDO:0000776
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A allergy involving a metal allergen.","definition_xrefs":["MONDO:patterns/allergy"],"gene_count":0,"genotype_count":0,"name":"obsolete metal allergy (obsolete MONDO:0000776)","secondary_identifiers":["ICD9:995.3","SCTID:300915004","DOID:0060501"],"synonyms":[{"name":"allergy of metal allergen","type":"exact"},{"name":"metal allergen allergic disease","type":"exact"}],"termid":"MONDO:0000776","xrefs":{"Monarch":{"xref_id":"0000776"}}}


id: GO:0038096
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An Fc-gamma receptor signaling pathway that contributes to the endocytic engulfment of external particulate material by phagocytes.","definition_xrefs":["GOC:phg","PMID:12488490","PMID:15466916"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fc receptor mediated stimulatory signaling pathway","termid":"GO:0002431"},{"relation_name":"is_a","term_name":"immune response-regulating cell surface receptor signaling pathway involved in phagocytosis","termid":"GO:0002433"},{"relation_name":"is_a","term_name":"Fc-gamma receptor signaling pathway","termid":"GO:0038094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"Fc-gamma receptor signaling pathway involved in phagocytosis","secondary_identifiers":["Reactome:R-HSA-9664422","Reactome:R-HSA-2029480"],"synonyms":[{"name":"Fc gamma receptor-dependent phagocytosis","type":"exact"},{"name":"Fc-gamma receptor signalling pathway involved in phagocytosis","type":"exact"},{"name":"Fcgamma receptor-mediated phagocytosis","type":"exact"},{"name":"IgG-mediated phagocytosis","type":"exact"}],"termid":"GO:0038096"}


id: PBO:0059086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MON2 antisense RNA 1","termid":"PBO:0059086"}


id: PBO:0085151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleoside triphosphate pyrophosphohydrolase; active against various substrates including ITP, dITP and XTP; mediates exclusion of non canonical purines, pyrimidines from dNTP pools; functions with YJL055W to mediate resistance to 5-FU; specifically reduces the incorporation of 5-FU into RNA without affecting uptake or incorporation of uracil into RNA; protein abundance increases in response to DNA replication stress; yeast HAM1 can complement knockdown of human homolog ITPA","termid":"PBO:0085151"}


id: GO:0005929
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface and of some cytoplasmic parts. Each cilium is largely bounded by an extrusion of the cytoplasmic (plasma) membrane, and contains a regular longitudinal array of microtubules, anchored to a basal body.","definition_xrefs":["GOC:cilia","ISBN:0198547684","PMID:20144998","PMID:17009929","PMID:16824949","GOC:curators","GOC:kmv","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane-bounded organelle","termid":"GO:0043227"},{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection","termid":"GO:0120025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cilium","secondary_identifiers":["FMA:67181","GO:0072372","Wikipedia:Cilium","NIF_Subcellular:sao787716553"],"synonyms":[{"name":"eukaryotic flagellum","type":"exact"},{"name":"flagellum","type":"related"},{"name":"microtubule-based flagellum","type":"exact"},{"name":"primary cilium","type":"narrow"}],"termid":"GO:0005929"}


id: PBO:0036110
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_actin_cable_assembly","termid":"PBO:0036110"}


id: PATO:0001792
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located on left side of from the a another entity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"left side of","termid":"PATO:0001792"}


id: PBO:0017708
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement S. cerevisiae BET2","termid":"PBO:0017708"}


id: PATO:0002136
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's relative inability of electromagnetism to pass through a particular material, particularly X-rays.","definition_xrefs":["Wikipedia:Wikipedia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"electromagnetic (EM) radiation quality","termid":"PATO:0001291"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radiopacity","termid":"PATO:0002136"}


id: GO:0102161
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: copal-8-ol diphosphate = 2-trans,6-trans,10-trans-geranylgeranyl diphosphate + H2O.","definition_xrefs":["EC:4.2.1.133","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"copal-8-ol diphosphate synthase activity","secondary_identifiers":["RHEA:32703","MetaCyc:RXN-11772"],"termid":"GO:0102161"}


id: MOD:01751
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The protein modification reporter fragment produced by an Proteome Sciences TMT6plex-129 reagent acylated residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"TMT6plex-129 reporter+balance reagent acylated residue","termid":"MOD:01744"},{"relation_name":"derives_from","term_name":"cysTMT6plex-129 reporter+balance reagent cysteine disulfide","termid":"MOD:01826"},{"relation_name":"is_a","term_name":"TMT6plex reporter fragment","termid":"MOD:01716"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex-129 reporter fragment","synonyms":[{"name":"2,6-dimethyl-1-methylidenepiperidinium","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"},{"name":"cysTMT6plex-129 reporter fragment","type":"exact"}],"termid":"MOD:01751"}


id: MONDO:1012863
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neurodegenerative brain disorder with mitochondrial dysfunction, amyloid-β accumulation, and lethal epilepsy that occurs in dogs due to a mutation in the PITRM1 gene.","definition_xrefs":["PMID:33835239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epilepsy, dog","termid":"MONDO:1010411"},{"relation_name":"is_a","term_name":"hereditary neurological disease, non-human animal","termid":"MONDO:1012972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy, mitochondrial dysfunction and neurodegeneration, PITRM1-related, dog","secondary_identifiers":["OMIA:002324-9615"],"termid":"MONDO:1012863","xrefs":{"Monarch":{"xref_id":"1012863"}}}


id: GO:0016565
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any activity that stops or downregulates transcription of genes globally, and is not specific to a particular gene or gene set.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete general transcriptional repressor activity (obsolete GO:0016565)","synonyms":[{"name":"general transcriptional repressor activity","type":"exact"}],"termid":"GO:0016565"}


id: PBO:0119643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RFTN1 antisense RNA 1","termid":"PBO:0119643"}


id: MONDO:0011204
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cerebellar degeneration-related autoantigen 3 (obsolete MONDO:0011204)","secondary_identifiers":["OMIM:602197"],"synonyms":[{"name":"Cdr3","type":"related"},{"name":"cerebellar Degeneration-related autoantigen type 3","type":"exact"},{"name":"cerebellar degeneration-related autoantigen 3","type":"exact"}],"termid":"MONDO:0011204","xrefs":{"Monarch":{"xref_id":"0011204"}}}


id: GO:0047132
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O2 + dihydrosanguinarine = H2O2 + sanguinarine.","definition_xrefs":["EC:1.5.3.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor","termid":"GO:0016647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"dihydrobenzophenanthridine oxidase activity","secondary_identifiers":["RHEA:16621","MetaCyc:1.5.3.12-RXN"],"synonyms":[{"name":"dihydrobenzophenanthridine:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0047132"}


id: GO:0030149
data:
  {"annotated_genes":["SJAG_00519","SJAG_01219"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91649,110664],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046521"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid).","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphingolipid metabolic process","termid":"GO:0006665"},{"relation_name":"is_a","term_name":"membrane lipid catabolic process","termid":"GO:0046466"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00519":null,"SJAG_01219":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"sphingolipid catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9845614"],"synonyms":[{"name":"sphingolipid breakdown","type":"exact"},{"name":"sphingolipid catabolism","type":"exact"},{"name":"sphingolipid degradation","type":"exact"}],"termid":"GO:0030149","terms_by_termid":{"GO:0046521":null}}


id: PBO:0086859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative S-adenosylmethionine-dependent lysine methyltransferase; responsible for modifying Lys-390 in translational elongation factor EF-1 alpha (eEF1A); has seven beta-strand methyltransferase motif; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm","termid":"PBO:0086859"}


id: MONDO:0005236
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-neoplastic disorder characterized by a localized collection of histiocytes containing lipid. Xanthomas usually occur in the skin and subcutaneous tissues, but occasionally they may involve the deep soft tissues.","definition_xrefs":["NCIT:C4071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease","termid":"MONDO:0005066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"xanthoma","secondary_identifiers":["EFO:0003075","HP:0001114","MEDGEN:86216","UMLS:C0302314"],"synonyms":[{"name":"xanthoma","type":"exact"},{"name":"xanthoma (disease)","type":"exact"}],"termid":"MONDO:0005236","xrefs":{"Monarch":{"xref_id":"0005236"}}}


id: PBO:0068168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 475","termid":"PBO:0068168"}


id: MONDO:0859171
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Luo-Schoch-Yamamoto syndrome","secondary_identifiers":["UMLS:C5561946","MEDGEN:1794156","OMIM:619460","DOID:0070416"],"termid":"MONDO:0859171","xrefs":{"Monarch":{"xref_id":"0859171"}}}


id: GO:0016348
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of an imaginal disc-derived leg joint are generated and organized. The leg joint is a flexible region that separates the rigid sections of a leg to allow movement in a controlled manner. An example of this is found in Drosophila melanogaster.","definition_xrefs":["ISBN:0879694238","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"imaginal disc-derived leg segmentation","termid":"GO:0036011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc-derived leg joint morphogenesis","termid":"GO:0016348"}


id: MONDO:0018084
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Uhl anomaly is characterized by an almost complete absence of the myocardium in the right ventricle resulting in a thin walled nonfunctional right ventricle manifesting with cardiac arrhythmias and right ventricular failure. Cases of partial absence of right ventricular myocardium which remains asymptomatic or mildly symptomatic until adulthood have also been reported. Patients presenting with complete Uhl anomaly should be considered for cardiac transplantation.","definition_xrefs":["Orphanet:3403"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiomyopathy","termid":"MONDO:0004994"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"Uhl anomaly","secondary_identifiers":["UMLS:C0265857","GARD:5393","MedDRA:10048951","MESH:C536932","MEDGEN:78576"],"synonyms":[{"name":"Uhl's anomaly","type":"related"},{"name":"parchment right ventricle","type":"related"}],"termid":"MONDO:0018084","xrefs":{"Monarch":{"xref_id":"0018084"}}}


id: PBO:0051901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit alpha 9","termid":"PBO:0051901"}


id: PBO:0031385
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_negative_regulation_of_transcription_by_glucose","termid":"PBO:0031385"}


id: GO:0007217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by tachykinin binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process. Tachykinin is a short peptide with the terminal sequence (Phe-X-Gly-Leu-Met-NH2).","definition_xrefs":["GOC:mah","PMID:14723970"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"tachykinin receptor signaling pathway","synonyms":[{"name":"tachykinin signalling pathway","type":"exact"}],"termid":"GO:0007217"}


id: GO:0102972
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: gibberellin A12 + 2-oxoglutarate + O2 = gibberellin A110 + succinate + carbon dioxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete gibberellin A12,2-oxoglutarate:oxygen oxidoreductase activity (gibberellin A110-forming) (obsolete GO:0102972)","termid":"GO:0102972"}


id: GO:1990563
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is wholly or partially contained within the lumen or membrane of the extracellular vesicular exosome.","definition_xrefs":["PMID:22660413","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"extracellular exosome","termid":"GO:0070062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005576","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"extracellular exosome complex","synonyms":[{"name":"exosome complex","type":"exact"},{"name":"extracellular vesicular exosome complex","type":"exact"}],"termid":"GO:1990563"}


id: PBO:0031482
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_pigment_accumulation","termid":"PBO:0031482"}


id: GO:1905520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of presynaptic active zone assembly.","definition_xrefs":["GOC:rl","GOC:BHF","GO_REF:0000058","GOC:TermGenie","PMID:15797875"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of presynaptic active zone assembly","termid":"GO:1905518"},{"relation_name":"is_a","term_name":"positive regulation of presynapse assembly","termid":"GO:1905608"},{"relation_name":"positively_regulates","term_name":"presynaptic active zone assembly","termid":"GO:1904071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of presynaptic active zone assembly","synonyms":[{"name":"activation of pre-synaptic active zone assembly","type":"narrow"},{"name":"activation of pre-synaptic active zone component assembly","type":"narrow"},{"name":"activation of pre-synaptic active zone component formation","type":"narrow"},{"name":"activation of pre-synaptic active zone formation","type":"narrow"},{"name":"activation of presynaptic active zone assembly","type":"narrow"},{"name":"activation of presynaptic active zone formation","type":"narrow"},{"name":"positive regulation of pre-synaptic active zone assembly","type":"exact"},{"name":"positive regulation of pre-synaptic active zone component assembly","type":"narrow"},{"name":"positive regulation of pre-synaptic active zone component formation","type":"narrow"},{"name":"positive regulation of pre-synaptic active zone formation","type":"exact"},{"name":"positive regulation of presynaptic active zone formation","type":"exact"},{"name":"up regulation of pre-synaptic active zone assembly","type":"exact"},{"name":"up regulation of pre-synaptic active zone component assembly","type":"narrow"},{"name":"up regulation of pre-synaptic active zone component formation","type":"narrow"},{"name":"up regulation of pre-synaptic active zone formation","type":"exact"},{"name":"up regulation of presynaptic active zone assembly","type":"exact"},{"name":"up regulation of presynaptic active zone formation","type":"exact"},{"name":"up-regulation of pre-synaptic active zone assembly","type":"exact"},{"name":"up-regulation of pre-synaptic active zone component assembly","type":"narrow"},{"name":"up-regulation of pre-synaptic active zone component formation","type":"narrow"},{"name":"up-regulation of pre-synaptic active zone formation","type":"exact"},{"name":"up-regulation of presynaptic active zone assembly","type":"exact"},{"name":"up-regulation of presynaptic active zone formation","type":"exact"},{"name":"upregulation of pre-synaptic active zone assembly","type":"exact"},{"name":"upregulation of pre-synaptic active zone component assembly","type":"narrow"},{"name":"upregulation of pre-synaptic active zone component formation","type":"narrow"},{"name":"upregulation of pre-synaptic active zone formation","type":"exact"},{"name":"upregulation of presynaptic active zone assembly","type":"exact"},{"name":"upregulation of presynaptic active zone formation","type":"exact"}],"termid":"GO:1905520"}


id: MONDO:1011519
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hemophilia A that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemophilia A, non-human animal","termid":"MONDO:1011408"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemophilia A, cattle","secondary_identifiers":["OMIA:000437-9913"],"termid":"MONDO:1011519","xrefs":{"Monarch":{"xref_id":"1011519"}}}


id: MONDO:1012643
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any von Willebrand disease that occurs in cats and is characterized by no detectable or a severe quantitative deficiency of the glycoprotein von Willebrand factor (vWF).","definition_xrefs":["OMIA:001058-9685"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Von Willebrand disease, domestic cat","termid":"MONDO:1011613"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"von Willebrand disease III, domestic cat","termid":"MONDO:1012643","xrefs":{"Monarch":{"xref_id":"1012643"}}}


id: MONDO:0019660
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pfeiffer syndrome type 2 (PS2) is a frequent and severe type of Pfeiffer syndrome (PS), characterized by cloverleaf skull, severe associated functional disorders, and hand/foot and elbow/knee abnormalities.","definition_xrefs":["Orphanet:93259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Pfeiffer syndrome","termid":"MONDO:0007043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Pfeiffer syndrome type 2","secondary_identifiers":["MEDGEN:1761826","UMLS:C5438849","icd11.foundation:531949642","GARD:16808"],"termid":"MONDO:0019660","xrefs":{"Monarch":{"xref_id":"0019660"}}}


id: MONDO:0002806
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lung carcinoma arising from the bronchial epithelium.","definition_xrefs":["NCIT:C35875"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bronchus cancer","termid":"MONDO:0001672"},{"relation_name":"is_a","term_name":"lung carcinoma","termid":"MONDO:0005138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"bronchogenic carcinoma","secondary_identifiers":["MEDGEN:2872","SCTID:254622008","CSP:2017-6052","DOID:3904","UMLS:C0007121","MESH:D002283","EFO:1001942","ICD9:162.9"],"synonyms":[{"name":"BC - bronchogenic carcinoma","type":"exact"},{"name":"bronchial carcinoma","type":"exact"},{"name":"bronchiogenic carcinoma","type":"exact"},{"name":"bronchogenic carcinoma","type":"exact"},{"name":"bronchogenic lung cancer","type":"exact"},{"name":"bronchogenic lung carcinoma","type":"exact"},{"name":"bronchus carcinoma","type":"exact"},{"name":"carcinoma of bronchus","type":"exact"},{"name":"carcinoma, bronchial, malignant","type":"exact"}],"termid":"MONDO:0002806","xrefs":{"Monarch":{"xref_id":"0002806"}}}


id: PBO:0031760
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_complex_assembly","termid":"PBO:0031760"}


id: PBO:0070218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 151 pseudogene","termid":"PBO:0070218"}


id: PBO:0045848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 38","termid":"PBO:0045848"}


id: GO:0008078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of mesodermal cells from one site to another.","definition_xrefs":["GOC:sat","GOC:ascb_2009","GOC:dph","PMID:25119047","GOC:tb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ameboidal-type cell migration","termid":"GO:0001667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesodermal cell migration","synonyms":[{"name":"mesoderm cell migration","type":"exact"}],"termid":"GO:0008078"}


id: GO:0038138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of a ligand to the tyrosine kinase receptor ERBB4, followed by ligand-induced homodimerization of ERBB4 and transmission of the signal into the cell by the homodimeric ERBB4 complex. The pathway ends with regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:16460914","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ERBB4 signaling pathway","termid":"GO:0038130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"ERBB4-ERBB4 signaling pathway","synonyms":[{"name":"ERBB4 homodimeric signaling pathway","type":"exact"},{"name":"ERBB4-ERBB4 signalling pathway","type":"exact"},{"name":"HER4-HER4 signaling pathway","type":"exact"}],"termid":"GO:0038138"}


id: GO:0150057
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A G protein-coupled receptor complex that serves as a receptor for amylin polypeptide (AMY) and consists of a calcitonin receptor (CTR/CALCR) and a receptor activity-modifying protein (RAMP) 2. Amylin receptor complex 2 (AMY2) also serves as a receptor for adrenomedullin (AM/ADM).","definition_xrefs":["GOC:bc","PMID:22500019","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amylin receptor complex","termid":"GO:1903440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"amylin receptor complex 2","synonyms":[{"name":"AMY2 complex","type":"exact"}],"termid":"GO:0150057"}


id: GO:0005609
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A laminin complex composed of alpha2, beta2 and gamma1 polypeptide chains.","definition_xrefs":["GOC:jl","PMID:10842354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laminin complex","termid":"GO:0043256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"laminin-4 complex","synonyms":[{"name":"laminin-221 complex","type":"exact"}],"termid":"GO:0005609"}


id: PBO:0005809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ran GTPase binding protein Mog1","termid":"PBO:0005809"}


id: MONDO:0800296
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microcornea, rod-cone dystrophy, cataract, and posterior staphyloma 2","secondary_identifiers":["MEDGEN:1763512","UMLS:C5435648"],"synonyms":[{"name":"MRCS2","type":"exact"}],"termid":"MONDO:0800296","xrefs":{"Monarch":{"xref_id":"0800296"}}}


id: GO:0071576
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to tetrahydrodictyopterin, the pterin 2-amino-6-[(1R,2R)-1,2-dihydroxypropyl]-5,6,7,8-tetrahydropteridin-4(3H)-one.","definition_xrefs":["GOC:vw","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetrahydrobiopterin binding","termid":"GO:0034617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"tetrahydrodictyopterin binding","synonyms":[{"name":"D-threo-tetrahydrobiopterin","type":"exact"},{"name":"DH4 binding","type":"exact"}],"termid":"GO:0071576"}


id: PR:Q9USZ0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A WD repeat-containing protein 6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02755","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C1306.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1306.02","secondary_identifiers":["UniProtKB:Q9USZ0"],"synonyms":[{"name":"Spom972h-WDR6","type":"exact"}],"termid":"PR:Q9USZ0"}


id: PBO:0052416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell immunoglobulin like receptor, three Ig domains and short cytoplasmic tail 1","termid":"PBO:0052416"}


id: PBO:0040805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"betaine--homocysteine S-methyltransferase","termid":"PBO:0040805"}


id: PBO:0084057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase activating protein (GAP) for Gsp1p; involved in nuclear transport","termid":"PBO:0084057"}


id: PBO:0000412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab GTPase binding (predicted)","termid":"PBO:0000412"}


id: MONDO:0021642
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A varicose disease that involves the mammalian vulva.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female reproductive system disorder","termid":"MONDO:0002263"},{"relation_name":"is_a","term_name":"pelvic varices","termid":"MONDO:0004869"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vulval varices","secondary_identifiers":["HP:0100677","icd11.foundation:53329171","SCTID:48868008","UMLS:C0155796","ICD10CM:I86.3","ICD9:456.6","MEDGEN:510083"],"synonyms":[{"name":"mammalian vulva varicose disease","type":"exact"},{"name":"varicose disease of mammalian vulva","type":"exact"}],"termid":"MONDO:0021642","xrefs":{"Monarch":{"xref_id":"0021642"}}}


id: PBO:0113299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in aromatic amino acid biosynthesis; up-regulated following GCN4 induction, amino acid starvation, rapamycin treatment in GCN4-dependent manner; promoter contains Gcn4 control response element, which is bound by Gcn4p in vivo","termid":"PBO:0113299"}


id: GO:0006062
data:
  {"annotated_genes":["SJAG_00237"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74359],"is_not":false,"summary":null,"term":"GO:0006062"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of sorbitol (D-glucitol), one of the ten stereoisomeric hexitols. It can be derived from glucose by reduction of the aldehyde group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sorbitol metabolic process","termid":"GO:0006060"},{"relation_name":"is_a","term_name":"hexitol catabolic process","termid":"GO:0019407"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"sorbitol catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:SORBDEG-PWY"],"synonyms":[{"name":"sorbitol breakdown","type":"exact"},{"name":"sorbitol catabolism","type":"exact"},{"name":"sorbitol degradation","type":"exact"}],"termid":"GO:0006062","terms_by_termid":{"GO:0006062":null}}


id: PBO:0039378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine monophosphate deaminase 1","termid":"PBO:0039378"}


id: GO:0070437
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains Grb2 and the adaptor protein Shc, and is involved in linking epidermal growth factor receptor (EGFR) activation to the p21-Ras pathway.","definition_xrefs":["PMID:7798267","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"Grb2-Shc complex","synonyms":[{"name":"Grb2-Shc complex, EGF stimulated","type":"narrow"}],"termid":"GO:0070437"}


id: PBO:0075028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-39","termid":"PBO:0075028"}


id: FYPO:0001946
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid separation does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid separation","termid":"FYPO:0000670"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000337"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000337","FYPO:0005447","FYPO:0001985","FYPO:0000631","FYPO:0000002","FYPO:0000641"],"is_obsolete":false,"name":"abolished mitotic sister chromatid separation","synonyms":[{"name":"abolished mitotic chromosome separation","type":"exact"},{"name":"absent mitotic sister chromatid separation","type":"exact"},{"name":"mitotic sister chromatid separation abolished","type":"exact"}],"termid":"FYPO:0001946"}


id: MOD:01583
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a threonine residue with the Applied Biosystems iTRAQ8plex-121 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-121 reporter+balance reagent acylated residue","termid":"MOD:01577"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-121 reporter+balance reagent O3-acylated threonine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01583"}


id: PBO:0001720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk6 (predicted)","termid":"PBO:0001720"}


id: MONDO:0010883
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pectus excavatum-macrocephaly-dysplastic nails syndrome is a rare multiple congenital anomalies syndrome characterized by relative macrocephaly, pectus excavatum, short stature, nail dysplasia, and motor developmental delay (that resolves during childhood). There have been no further descriptions in the literature since 1992.","definition_xrefs":["Orphanet:2835"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pectus excavatum-macrocephaly-dysplastic nails syndrome","secondary_identifiers":["OMIM:600399","SCTID:763863002","MESH:C536728","MEDGEN:373902","UMLS:C1838160","GARD:374"],"synonyms":[{"name":"Zori Stalker Williams syndrome","type":"related"},{"name":"Zori-Stalker-Williams syndrome","type":"exact"},{"name":"familial short stature, developmental delay, pectus abnormalities, distinctive facies, and dysplastic nails","type":"related"},{"name":"pectus excavatum, macrocephaly and dysplastic nails","type":"related"},{"name":"pectus excavatum, macrocephaly, short stature, and dysplastic nails","type":"related"}],"termid":"MONDO:0010883","xrefs":{"Monarch":{"xref_id":"0010883"}}}


id: PBO:0071593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 10","termid":"PBO:0071593"}


id: MONDO:0005617
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A usually aggressive malignant epithelial neoplasm composed of atypical cells which do not display evidence of glandular, squamous, or transitional cell differentiation.","definition_xrefs":["NCIT:C3692"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoma","termid":"MONDO:0004993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"undifferentiated carcinoma","secondary_identifiers":["ICDO:8021/3","EFO:0006772","MEDGEN:60010","UMLS:C0205698","ICDO:8020/3"],"synonyms":[{"name":"anaplastic carcinoma","type":"exact"},{"name":"carcinoma, undifferentiated","type":"exact"},{"name":"carcinoma, undifferentiated, malignant","type":"exact"},{"name":"undifferentiated carcinoma","type":"exact"}],"termid":"MONDO:0005617","xrefs":{"Monarch":{"xref_id":"0005617"}}}


id: MONDO:0859358
data:
  {"annotated_genes":["SJAG_01240"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87337],"is_not":false,"summary":null,"term":"MONDO:0859358"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated dilated cardiomyopathy","termid":"MONDO:0700335"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01240":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"cardiomyopathy, dilated, 2H","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1824069","UMLS:C5774296","OMIM:620203"],"termid":"MONDO:0859358","terms_by_termid":{"MONDO:0859358":null},"xrefs":{"Monarch":{"xref_id":"0859358"}}}


id: PBO:0081459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 326","termid":"PBO:0081459"}


id: GO:0009197
data:
  {"annotated_genes":["SJAG_00885","SJAG_02874","SJAG_04665","SJAG_04657"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109091,97305,94251],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006240"},{"annotations":[72779],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006233"},{"annotations":[72778],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006227"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pyrimidine deoxyribonucleoside diphosphate, a compound consisting of a pyrimidine base linked to a deoxyribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside diphosphate biosynthetic process","termid":"GO:0009139"},{"relation_name":"is_a","term_name":"deoxyribonucleoside diphosphate biosynthetic process","termid":"GO:0009189"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside diphosphate metabolic process","termid":"GO:0009196"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_02874":null,"SJAG_04657":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"pyrimidine deoxyribonucleoside diphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"pyrimidine deoxyribonucleoside diphosphate anabolism","type":"exact"},{"name":"pyrimidine deoxyribonucleoside diphosphate biosynthesis","type":"exact"},{"name":"pyrimidine deoxyribonucleoside diphosphate formation","type":"exact"},{"name":"pyrimidine deoxyribonucleoside diphosphate synthesis","type":"exact"}],"termid":"GO:0009197","terms_by_termid":{"GO:0006227":null,"GO:0006233":null,"GO:0006240":null}}


id: GO:0102597
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ent-sandaracopimaradien-3-beta-ol + NADPH + H+ + O2 = oryzalexin E + NADP + H2O.","definition_xrefs":["GOC:pz","EC:1.14.14.122"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"3alpha-hydroxy-ent-sandaracopimardiene 9-beta-monooxygenase activity","secondary_identifiers":["RHEA:41468","MetaCyc:RXN-15381"],"termid":"GO:0102597"}


id: MONDO:0021639
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A glioma arising from the central nervous system. This category includes diffuse astrocytoma, ependymoma, oligodendroglioma, and oligoastrocytoma.","definition_xrefs":["NCIT:C132505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"low grade glioma","termid":"MONDO:0021637"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grade II glioma","secondary_identifiers":["MEDGEN:1391502","UMLS:C4330050"],"synonyms":[{"name":"WHO grade II glioma","type":"exact"},{"name":"grade II glioma","type":"exact"}],"termid":"MONDO:0021639","xrefs":{"Monarch":{"xref_id":"0021639"}}}


id: GO:0150089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a synapse between a multiple synapse bouton and one or more dendritic spines.","definition_xrefs":["PMID:22028887","PMID:10586883","PMID:11466428","PMID:7482800","PMID:29774619","PMID:8366344","GOC:aruk","GOC:bc","PMID:18501438","PMID:11248111"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse organization","termid":"GO:0050808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"multiple spine synapse organization","synonyms":[{"name":"multi-synapse organisation","type":"broad"},{"name":"multi-synapse organization","type":"broad"},{"name":"multi-synaptic organisation","type":"broad"},{"name":"multi-synaptic organization","type":"broad"},{"name":"multiple spine synapse organisation","type":"exact"},{"name":"multisynapse organisation","type":"broad"},{"name":"multisynapse organization","type":"broad"},{"name":"multisynaptic organisation","type":"broad"},{"name":"multisynaptic organization","type":"broad"}],"termid":"GO:0150089"}


id: PBO:0039705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apelin receptor","termid":"PBO:0039705"}


id: MONDO:1011323
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Idiopathic disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"idiopathic disease, non-human animal","termid":"MONDO:1011323","xrefs":{"Monarch":{"xref_id":"1011323"}}}


id: GO:1903876
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to 11-deoxycortisol.","definition_xrefs":["GOC:TermGenie","PMID:10802282","GO_REF:0000067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol binding","termid":"GO:0043178"},{"relation_name":"is_a","term_name":"steroid hormone binding","termid":"GO:1990239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0008289"],"is_obsolete":false,"name":"11-deoxycortisol binding","termid":"GO:1903876"}


id: MONDO:0013039
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any 3-M syndrome in which the cause of the disease is a mutation in the OBSL1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3-M syndrome","termid":"MONDO:0007477"},{"relation_name":"is_a","term_name":"primordial dwarfism and slender bone disorder","termid":"MONDO:0800063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"3M syndrome 2","secondary_identifiers":["UMLS:C2752041","GARD:15591","OMIM:612921","MESH:C567862","MEDGEN:414168"],"synonyms":[{"name":"3-M syndrome 2","type":"exact"},{"name":"3-M syndrome caused by mutation in OBSL1","type":"exact"},{"name":"3M syndrome 2","type":"exact"},{"name":"3M2","type":"related"},{"name":"OBSL1 3-M syndrome","type":"exact"},{"name":"three M syndrome 2","type":"exact"},{"name":"three M syndrome type 2","type":"exact"}],"termid":"MONDO:0013039","xrefs":{"Monarch":{"xref_id":"0013039"}}}


id: GO:0071332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a fructose stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to fructose","termid":"GO:0009750"},{"relation_name":"is_a","term_name":"cellular response to hexose stimulus","termid":"GO:0071331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to fructose stimulus","termid":"GO:0071332"}


id: PBO:0004586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sir2 family histone deacetylase Sir2","termid":"PBO:0004586"}


id: GO:0106235
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ceramide-1-phosphate + H2O = ceramide+ phosphate.","definition_xrefs":["GOC:lb","PMID:10359651"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid phosphatase activity","termid":"GO:0042577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"ceramide-1-phosphate phosphatase activity","secondary_identifiers":["RHEA:50888"],"termid":"GO:0106235"}


id: PBO:0061506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurexin 1","termid":"PBO:0061506"}


id: PBO:0083902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Flavin adenine dinucleotide (FAD) synthetase; performs the second step in synthesis of FAD from riboflavin; mutation is functionally complemented by human FLAD1","termid":"PBO:0083902"}


id: PBO:0071352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 11","termid":"PBO:0071352"}


id: PBO:0039274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG1 chitobiosyldiphosphodolichol beta-mannosyltransferase like 2","termid":"PBO:0039274"}


id: GO:0004213
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of peptide bonds with a broad specificity. Preferentially cleaves the terminal bond of -Arg-Arg-Xaa motifs in small molecule substrates (thus differing from cathepsin L). In addition to being an endopeptidase, shows peptidyl-dipeptidase activity, liberating C-terminal dipeptides.","definition_xrefs":["EC:3.4.22.1"],"gene_count":0,"genotype_count":0,"name":"obsolete cathepsin B activity (obsolete GO:0004213)","synonyms":[{"name":"cathepsin B activity","type":"exact"},{"name":"cathepsin B1 activity","type":"related"},{"name":"cathepsin II","type":"related"}],"termid":"GO:0004213"}


id: PBO:0071311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 34","termid":"PBO:0071311"}


id: PBO:0045238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C19 pseudogene 6","termid":"PBO:0045238"}


id: PBO:0054443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1840","termid":"PBO:0054443"}


id: PBO:0087550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of RNA polymerase III transcription initiation factor complex; part of TauB domain of TFIIIC that binds DNA at BoxB promoter sites of tRNA and similar genes; cooperates with Tfc6p in DNA binding; largest of six subunits of RNA polymerase III transcription initiation factor complex (TFIIIC); colocalizes with condensin at pol III genes and several ETC (extra TFIIIC) sites; may have a role in recruiting or stabilizing Scc2/4 and condensin on chromosomes","termid":"PBO:0087550"}


id: PBO:0082290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Arginine/alanine amino peptidase; overproduction stimulates glycogen accumulation; AAP1 has a paralog, APE2, that arose from the whole genome duplication","termid":"PBO:0082290"}


id: PBO:0053145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactate dehydrogenase A pseudogene 1","termid":"PBO:0053145"}


id: PBO:0067262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 336, pseudogene","termid":"PBO:0067262"}


id: MONDO:0022620
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete CD4 deficiency (obsolete MONDO:0022620)","termid":"MONDO:0022620","xrefs":{"Monarch":{"xref_id":"0022620"}}}


id: PATO:0000414
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A branchiness quality inhering in a bearer by virtue of the bearer's lacking branches.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branchiness","termid":"PATO:0002009"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unbranched","termid":"PATO:0000414"}


id: GO:0019705
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a myristoyl (systematic name, tetradecanoyl) group to a sulfur atom on a cysteine residue of a protein molecule in the reaction: tetradecanoyl-CoA + L-cysteinyl-[protein] = CoA + S-tetradecanoyl-L-cysteinyl-[protein].","definition_xrefs":["GOC:ai","PMID:22247542","RHEA:59736"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myristoyltransferase activity","termid":"GO:0019107"},{"relation_name":"is_a","term_name":"protein-cysteine S-acyltransferase activity","termid":"GO:0019707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016746","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"protein-cysteine S-myristoyltransferase activity","termid":"GO:0019705"}


id: GO:0018833
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,1,1-trichloro-2,2-bis(4-chlorophenyl)ethane = 1,1-dichloro-2,2-bis(4-chlorophenyl)ethylene + chloride + H+.","definition_xrefs":["EC:4.5.1.1","RHEA:19217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-halide lyase activity","termid":"GO:0016848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"DDT-dehydrochlorinase activity","secondary_identifiers":["UM-BBD_reactionID:r0439","KEGG_REACTION:R04522","MetaCyc:DDT-DEHYDROCHLORINASE-RXN"],"synonyms":[{"name":"1,1,1-trichloro-2,2-bis(4-chlorophenyl)ethane chloride-lyase [1,1-dichloro-2,2-bis(4-chlorophenyl)ethylene-forming]","type":"related"},{"name":"1,1,1-trichloro-2,2-bis(4-chlorophenyl)ethane chloride-lyase activity","type":"related"},{"name":"DDT dehydrochlorinase activity","type":"exact"},{"name":"DDT-as","type":"related"},{"name":"DDT-ase activity","type":"related"},{"name":"DDTase activity","type":"related"}],"termid":"GO:0018833"}


id: PBO:0060310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin light chain kinase","termid":"PBO:0060310"}


id: GO:0001322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) occurring in dividing cells as they age as a result of oxidative stress, where the change varies according to the age of the cell or organism.","definition_xrefs":["GOC:jh"],"gene_count":0,"genotype_count":0,"name":"obsolete age-dependent response to oxidative stress involved in replicative cell aging (obsolete GO:0001322)","synonyms":[{"name":"age-dependent response to oxidative stress during replicative cell ageing","type":"related"},{"name":"age-dependent response to oxidative stress during replicative cell aging","type":"related"}],"termid":"GO:0001322"}


id: GO:0046215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of siderophores, low molecular weight Fe(III)-chelating substances made by aerobic or facultatively anaerobic bacteria, especially when growing under iron deficient conditions. The complexes of Fe(3+)-siderophores have very high stability constants and are taken up by specific transport systems by microorganisms; the subsequent release of iron requires enzymatic action.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"siderophore metabolic process","termid":"GO:0009237"},{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"siderophore catabolic process","synonyms":[{"name":"siderochrome catabolism","type":"narrow"},{"name":"siderophore breakdown","type":"exact"},{"name":"siderophore catabolism","type":"exact"},{"name":"siderophore degradation","type":"exact"}],"termid":"GO:0046215"}


id: PBO:0027757
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_phosphorylation_during_cellular_response_to_calcium_ion","termid":"PBO:0027757"}


id: PBO:0086851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative regulatory subunit of protein phosphatase Glc7p; involved in glycogen metabolism; contains a conserved motif (GVNK motif) that is also found in Gac1p, Pig1p, and Pig2p; GIP2 has a paralog, PIG2, that arose from the whole genome duplication","termid":"PBO:0086851"}


id: GO:0072286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric connecting tubule over time, from its formation to the mature structure. The metanephric connecting tubule is a tubular segment of the metanephric nephron; it connects the distal convoluted tubule to the collecting duct in the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"connecting tubule development","termid":"GO:0072027"},{"relation_name":"is_a","term_name":"metanephric nephron tubule development","termid":"GO:0072234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric connecting tubule development","synonyms":[{"name":"metanephric connecting duct development","type":"exact"}],"termid":"GO:0072286"}


id: PBO:0051564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 12 receptor subunit beta 1","termid":"PBO:0051564"}


id: PBO:0113526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar aspartyl protease (proteinase A); required for post-translational precursor maturation of vacuolar proteinases; important for protein turnover after oxidative damage; plays a protective role in acetic acid induced apoptosis; synthesized as a zymogen, self-activates; targeted to vacuole via Vps10p-dependent endosomal vacuolar protein sorting pathway","termid":"PBO:0113526"}


id: GO:0050592
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (Z)-(4-hydroxyphenyl)acetaldehyde oxime + H+ + NADPH + O2 = (S)-4-hydroxymandelonitrile + 2 H2O + NADP+.","definition_xrefs":["RHEA:18401","EC:1.14.14.37"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"4-hydroxyphenylacetaldehyde oxime monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R05728","MetaCyc:1.14.13.68-RXN"],"synonyms":[{"name":"(Z)-4-hydroxyphenylacetaldehyde oxime,NADPH:oxygen oxidoreductase activity","type":"related"},{"name":"4-hydroxybenzeneacetaldehyde oxime monooxygenase activity","type":"related"},{"name":"4-hydroxyphenylacetaldehyde oxime,NADPH:oxygen oxidoreductase activity","type":"related"},{"name":"CYP71E1 activity","type":"narrow"},{"name":"NADPH-cytochrome P450 reductase (CYP71E1)","type":"related"},{"name":"cytochrome P450-II-dependent monooxygenase activity","type":"narrow"},{"name":"cytochrome P450II-dependent monooxygenase activity","type":"related"}],"termid":"GO:0050592"}


id: PR:P32372
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rad4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P32372"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-M checkpoint control protein rad4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C4.18c","synonyms":[{"name":"P74 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rad4","type":"exact"},{"name":"protein cut5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P32372"}


id: GO:0033422
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a CCC codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003723","GO:0060090"],"is_obsolete":false,"name":"CCC codon-amino acid adaptor activity","synonyms":[{"name":"proline tRNA","type":"related"}],"termid":"GO:0033422"}


id: MONDO:0859250
data:
  {"annotated_genes":["SJAG_04587"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88787],"is_not":false,"summary":null,"term":"MONDO:0859250"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04587":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with microcephaly, hypotonia, nystagmus, and seizures","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:619876","MEDGEN:1810140","UMLS:C5676986"],"termid":"MONDO:0859250","terms_by_termid":{"MONDO:0859250":null},"xrefs":{"Monarch":{"xref_id":"0859250"}}}


id: PBO:0002769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEL1 repeat protein, unknown biological role","termid":"PBO:0002769"}


id: MONDO:0005176
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign form of insulitis which is an inflammation of the islets of Langerhans of the pancreas. The pancreas and in some cases the Pancreatic β-cells become infiltrated by polymorphonuclear leukocytes and infiltrated by mononuclear cells, leading to inflammation.","definition_xrefs":["EFO:0002502"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine pancreas disorder","termid":"MONDO:0001933"},{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"benign insulitis","secondary_identifiers":["Wikipedia:Insulitis","PMID:20545565"],"termid":"MONDO:0005176","xrefs":{"Monarch":{"xref_id":"0005176"}}}


