# terms

id: GO:0005464
data:
  {"annotated_genes":["SJAG_00434"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79323],"is_not":false,"summary":null,"term":"GO:0005464"}]},"cv_name":"molecular_function","definition":"Enables the transfer of UDP-xylose from one side of a membrane to the other. UDP-xylose is a substance composed of xylose in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"pyrimidine nucleotide-sugar transmembrane transporter activity","termid":"GO:0015165"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00434":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"UDP-xylose transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-742373"],"termid":"GO:0005464","terms_by_termid":{"GO:0005464":null}}


id: MONDO:0034819
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A rare familial intestinal malformation characterized by failure of the rotation of the developing gastrointestinal tract around the superior mesenteric artery during embryonic development, resulting in a spectrum of abnormalities of intestinal position and fixation. Patients most typically present in the neonatal period with midgut volvulus, which can lead to short bowel syndrome or even death. Signs and symptoms include bilious vomiting, feeding intolerance, failure to thrive, constipation, bloody stools, or intermittent apnea. The condition may also manifest later in life with complications like kinking or hernias and a broad range of intestinal symptoms. It can be an isolated finding or occur in association with other anomalies.","definition_xrefs":["Orphanet:508410"],"gene_count":0,"genotype_count":0,"name":"obsolete familial intestinal malrotation (obsolete MONDO:0034819)","termid":"MONDO:0034819","xrefs":{"Monarch":{"xref_id":"0034819"}}}


id: GO:0019447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of D-cysteine, (S)-2-amino-3-mercaptopropanoic acid, which occurs naturally in firefly luciferin.","definition_xrefs":["PMID:11527960"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteine catabolic process","termid":"GO:0009093"},{"relation_name":"is_a","term_name":"D-amino acid catabolic process","termid":"GO:0019478"},{"relation_name":"is_a","term_name":"D-cysteine metabolic process","termid":"GO:0046438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"D-cysteine catabolic process","synonyms":[{"name":"D-cysteine breakdown","type":"exact"},{"name":"D-cysteine catabolism","type":"exact"},{"name":"D-cysteine degradation","type":"exact"}],"termid":"GO:0019447"}


id: PBO:0117165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CELF6 antisense RNA 1","termid":"PBO:0117165"}


id: FYPO:0003892
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which error-prone translesion synthesis is abnormal. Error-prone translesion synthesis a DNA repair process that results in the conversion of DNA-damage induced single-stranded gaps into large molecular weight DNA after replication.","definition_xrefs":["PomBase:mah","GO:0042276"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA repair during vegetative growth","termid":"FYPO:0000188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000298","FYPO:0000002","FYPO:0001320","FYPO:0000293"],"is_obsolete":false,"name":"abnormal error-prone translesion synthesis","synonyms":[{"name":"abnormal error-prone translesion synthesis during mitotic cell cycle","type":"related"},{"name":"abnormal error-prone translesion synthesis during vegetative growth","type":"exact"}],"termid":"FYPO:0003892"}


id: MONDO:1012346
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"facial eczema, non-human animal","termid":"MONDO:1011746"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"facial eczema, cattle","secondary_identifiers":["OMIA:001276-9913"],"termid":"MONDO:1012346","xrefs":{"Monarch":{"xref_id":"1012346"}}}


id: PBO:0076722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trichoplein keratin filament binding","termid":"PBO:0076722"}


id: MONDO:0010664
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Snyder-Robinson syndrome (SRS) is an X-linked intellectual disability syndrome, including also hypotonia, an unsteady gait, osteoporosis, kyphoscoliosis and facial asymmetry. Severe generalized psychomotor evolving to moderate to profound global intellectual disability is also observed.","definition_xrefs":["Orphanet:3063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"disorder of polyamine metabolism","termid":"MONDO:0800159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"syndromic X-linked intellectual disability Snyder type","secondary_identifiers":["SCTID:702416008","MESH:C536678","OMIM:309583","MEDGEN:162918","DOID:0060802","ICD9:758.89","NORD:1890","UMLS:C0796160","GARD:5615"],"synonyms":[{"name":"MRXSSR","type":"related"},{"name":"SRS","type":"exact"},{"name":"Snyder-Robinson Syndrome","type":"exact"},{"name":"Snyder-Robinson intellectual disability syndrome","type":"exact"},{"name":"Snyder-Robinson mental retardation syndrome","type":"exact"},{"name":"Snyder-Robinson syndrome","type":"exact"},{"name":"X-linked intellectual disability Snyder-Robinson type","type":"related"},{"name":"X-linked intellectual disability, Snyder type","type":"related"},{"name":"X-linked mental retardation Snyder-Robinson type","type":"related"},{"name":"intellectual developmental disorder, X-linked syndromic, Snyder-Robinson type, X-linked recessive","type":"exact"},{"name":"intellectual disability, X-linked, Snyder-Robinson type","type":"exact"},{"name":"intellectual disability, X-linked, syndromic, Snyder-Robinson type","type":"related"},{"name":"mental retardation, X-linked, Snyder-Robinson type","type":"exact"},{"name":"mental retardation, X-linked, syndromic, Snyder-Robinson type","type":"related"},{"name":"spermine synthase deficiency","type":"exact"},{"name":"syndromic X-linked intellectual disability Snyder type","type":"exact"}],"termid":"MONDO:0010664","xrefs":{"Monarch":{"xref_id":"0010664"}}}


id: MONDO:0012796
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the PROM1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"},{"relation_name":"is_a","term_name":"PROM1-related recessive retinopathy","termid":"MONDO:1040052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066","MONDO:0005328","MONDO:0006025"],"is_obsolete":false,"name":"retinitis pigmentosa 41","secondary_identifiers":["ICD10CM:H35.5","OMIM:612095","DOID:0110376","MESH:C567422","GARD:10379","UMLS:C2677516","MEDGEN:383126"],"synonyms":[{"name":"PROM1 retinitis pigmentosa","type":"exact"},{"name":"RP 41","type":"related"},{"name":"RP41","type":"exact"},{"name":"retinal Degeneration, autosomal recessive, prominin-related","type":"related"},{"name":"retinitis pigmentosa 41","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in PROM1","type":"exact"},{"name":"retinitis pigmentosa type 41","type":"exact"}],"termid":"MONDO:0012796","xrefs":{"Monarch":{"xref_id":"0012796"}}}


id: GO:0015174
data:
  {"annotated_genes":["SJAG_00877","SJAG_04787","SJAG_04637","SJAG_03256","SJAG_03400","SJAG_02029","SJAG_00051","SJAG_04725"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[65199,96407,97516],"is_not":false,"summary":null,"term":"GO:0015174"},{"annotations":[99169,102180,80880],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061459"},{"annotations":[80873,99170],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005290"},{"annotations":[80877,104628,102181,99171,111878],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015189"}]},"cv_name":"molecular_function","definition":"Enables the transfer of basic amino acids from one side of a membrane to the other. Basic amino acids have side chains with a positive charge at pH 7.3.","definition_xrefs":["GOC:mtg_transport","GOC:ai","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transporter activity","termid":"GO:0015171"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00051":null,"SJAG_00877":null,"SJAG_02029":null,"SJAG_03256":null,"SJAG_03400":null,"SJAG_04637":null,"SJAG_04725":null,"SJAG_04787":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"basic amino acid transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0005286","GO:0015326","Reactome:R-HSA-8932851","Reactome:R-HSA-8959781"],"synonyms":[{"name":"basic amino acid permease activity","type":"exact"},{"name":"basic amino acid transporter activity","type":"broad"},{"name":"cationic amino acid transmembrane transporter activity","type":"related"}],"termid":"GO:0015174","terms_by_termid":{"GO:0005290":null,"GO:0015174":null,"GO:0015189":null,"GO:0061459":null}}


id: PBO:0042225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCNT2 antisense RNA 1","termid":"PBO:0042225"}


id: GO:0006840
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of alpha-ketoglutarate and malate into, out of or within a mitochondrion.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial alpha-ketoglutarate/malate transport (obsolete GO:0006840)","synonyms":[{"name":"mitochondrial alpha-ketoglutarate/malate transport","type":"exact"},{"name":"mitochondrial oxoglutarate/malate transport","type":"exact"}],"termid":"GO:0006840"}


id: FYPO:0005616
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, does not occur during a cellular response to bleomycin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein phosphorylation during vegetative growth","termid":"FYPO:0002033"},{"relation_name":"is_a","term_name":"abnormal protein phosphorylation during cellular response to bleomycin","termid":"FYPO:0005615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0002274","FYPO:0001985","FYPO:0002494","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein phosphorylation during cellular response to bleomycin","synonyms":[{"name":"abolished protein phosphorylation during cellular response to bleomycin during mitotic cell cycle","type":"related"},{"name":"abolished protein phosphorylation during cellular response to bleomycin during vegetative growth","type":"exact"},{"name":"protein phosphorylation abolished during cellular response to bleomycin","type":"exact"}],"termid":"FYPO:0005616"}


id: PBO:0038703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTB pseudogene 16","termid":"PBO:0038703"}


id: PBO:0045843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 33","termid":"PBO:0045843"}


id: SO:1001265
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A recoded_mRNA that was modified by an alteration of codon meaning.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"codon_redefined","termid":"SO:0000882"},{"relation_name":"is_a","term_name":"recoded_mRNA","termid":"SO:1001261"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA_recoded_by_codon_redefinition","synonyms":[{"name":"mRNA recoded by codon redefinition","type":"exact"}],"termid":"SO:1001265"}


id: PBO:0085371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphotyrosine-specific protein phosphatase; major role in the pheromone adaptive response through dephosphorylation of the Fus3p MAPK with a minor role by Ptp2p and Msg5p; minor role in the inactivation of Hog1p MAPK during osmolarity sensing with major role by Ptp2p; dephosphorylates and regulates the localization of Hog1p; minor role in the cell wall integrity pathway through tyrosine dephosphorylation of the MAPK Slt2p while Ptp2p plays a major role; localizes to the cytoplasm","termid":"PBO:0085371"}


id: GO:0000289
data:
  {"annotated_genes":["SJAG_04350","SJAG_01910","SJAG_02383","SJAG_03883","SJAG_00343","SJAG_02808","SJAG_04682","SJAG_01053","SJAG_03597","SJAG_02540","SJAG_02370","SJAG_00686","SJAG_00285","SJAG_04427","SJAG_01436","SJAG_00966","SJAG_03113","SJAG_04407","SJAG_01944"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71983,75423,77224,79454,80543,81491,91604,92596,94315,94412,96145,97325,117523,118467],"is_not":false,"summary":null,"term":"GO:0000289"},{"annotations":[93489],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0060212"},{"annotations":[106748,91515,74475],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0060213"},{"annotations":[100325],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0060211"}]},"cv_name":"biological_process","definition":"Shortening of the poly(A) tail of a nuclear-transcribed mRNA from full length to an oligo(A) length.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear-transcribed mRNA catabolic process","termid":"GO:0000956"},{"relation_name":"part_of","term_name":"nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay","termid":"GO:0000288"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00285":null,"SJAG_00343":null,"SJAG_00686":null,"SJAG_00966":null,"SJAG_01053":null,"SJAG_01436":null,"SJAG_01910":null,"SJAG_01944":null,"SJAG_02370":null,"SJAG_02383":null,"SJAG_02540":null,"SJAG_02808":null,"SJAG_03113":null,"SJAG_03597":null,"SJAG_03883":null,"SJAG_04350":null,"SJAG_04407":null,"SJAG_04427":null,"SJAG_04682":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"part_of","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0016071","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"nuclear-transcribed mRNA poly(A) tail shortening","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-429947"],"synonyms":[{"name":"3' to 5' mRNA deadenylation","type":"related"},{"name":"mRNA deadenylation","type":"related"},{"name":"nuclear mRNA poly(A) tail shortening","type":"related"}],"termid":"GO:0000289","terms_by_termid":{"GO:0000289":null,"GO:0060211":null,"GO:0060212":null,"GO:0060213":null}}


id: PBO:0040764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BEN domain containing 2","termid":"PBO:0040764"}


id: PBO:0058220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4510","termid":"PBO:0058220"}


id: GO:0098734
data:
  {"annotated_genes":["SJAG_02056","SJAG_02268","SJAG_00774"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57296,62166,71387],"is_not":false,"summary":null,"term":"GO:0098734"}]},"cv_name":"biological_process","definition":"The removal of palymitoyl groups from a macromolecule.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule deacylation","termid":"GO:0098732"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00774":null,"SJAG_02056":null,"SJAG_02268":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"macromolecule depalmitoylation","references_by_uniquename":{"GO_REF:0000108":null},"termid":"GO:0098734","terms_by_termid":{"GO:0098734":null}}


id: PBO:0028268
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions,_elongated_multiseptate_tapered_cell","termid":"PBO:0028268"}


id: PBO:0063068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pannexin 1","termid":"PBO:0063068"}


id: MONDO:1011828
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm, non-human animal","termid":"MONDO:0700098"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer, non-human animal","secondary_identifiers":["OMIA:002587"],"termid":"MONDO:1011828","xrefs":{"Monarch":{"xref_id":"1011828"}}}


id: PBO:0039975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 4C","termid":"PBO:0039975"}


id: GO:0034708
data:
  {"annotated_genes":["SJAG_03431","SJAG_00769","SJAG_04680","SJAG_04574","SJAG_00341","SJAG_07011","SJAG_03949","SJAG_02170","SJAG_02768","SJAG_01325","SJAG_04890","SJAG_04848","SJAG_02637","SJAG_02119","SJAG_02386","SJAG_02329","SJAG_01540","SJAG_04181","SJAG_03680","SJAG_00896","SJAG_00756"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[98536,115839,119555,112329,96155,120689],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043494"},{"annotations":[80724,98035],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035657"},{"annotations":[92521,73631,111193,73025,80252,117568,77237,75688],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048188"},{"annotations":[76679,75889],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031515"},{"annotations":[77141,105957],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043528"},{"annotations":[59465,117577],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106143"}]},"cv_name":"cellular_component","definition":"A protein complex that possesses methyltransferase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"intracellular anatomical structure","termid":"GO:0005622"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00341":null,"SJAG_00756":null,"SJAG_00769":null,"SJAG_00896":null,"SJAG_01325":null,"SJAG_01540":null,"SJAG_02119":null,"SJAG_02170":null,"SJAG_02329":null,"SJAG_02386":null,"SJAG_02637":null,"SJAG_02768":null,"SJAG_03431":null,"SJAG_03680":null,"SJAG_03949":null,"SJAG_04181":null,"SJAG_04574":null,"SJAG_04680":null,"SJAG_04848":null,"SJAG_04890":null,"SJAG_07011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"methyltransferase complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0034708","terms_by_termid":{"GO:0031515":null,"GO:0035657":null,"GO:0043494":null,"GO:0043528":null,"GO:0048188":null,"GO:0106143":null}}


id: PR:O94247
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-binding protein SMUBP-2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04870","PRO:DNx","PANTHER:PTHR10887:SF23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase alpha-associated DNA helicase A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC737.07c","secondary_identifiers":["UniProtKB:O94247"],"synonyms":[{"name":"Spom972h-IGHMBP2","type":"exact"}],"termid":"PR:O94247"}


id: GO:0072243
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric nephron epithelium over time, from its formation to the mature structure. An epithelium is a tissue that covers the internal or external surfaces of an anatomical structure. The metanephric nephron epithelium is a tissue that covers the surface of a nephron in the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron epithelium development","termid":"GO:0072009"},{"relation_name":"is_a","term_name":"metanephric epithelium development","termid":"GO:0072207"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric nephron epithelium development","termid":"GO:0072243"}


id: PBO:0061373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 33","termid":"PBO:0061373"}


id: PBO:0027494
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_wortmannin","termid":"PBO:0027494"}


id: MONDO:0006850
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm that affects the maxillary sinus. Representative examples of benign neoplasms include Schneiderian papilloma and salivary gland-type adenoma. Representative examples of malignant neoplasms include carcinoma and lymphoma.","definition_xrefs":["NCIT:C3219"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paranasal sinus neoplasm","termid":"MONDO:0005289"},{"relation_name":"is_a","term_name":"maxillary neoplasm","termid":"MONDO:0005841"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maxillary sinus neoplasm","secondary_identifiers":["SCTID:126676009","MedDRA:10026130","MEDGEN:6247","UMLS:C0024958","MESH:D008444","EFO:1001035","DOID:1358","MONDO:0021213"],"synonyms":[{"name":"maxillary antrum neoplasm","type":"exact"},{"name":"maxillary antrum tumor","type":"exact"},{"name":"maxillary antrum tumour","type":"exact"},{"name":"maxillary sinus neoplasm","type":"exact"},{"name":"maxillary sinus neoplasm (disease)","type":"exact"},{"name":"maxillary sinus tumor","type":"exact"},{"name":"maxillary sinus tumour","type":"exact"},{"name":"maxillofacial sinus neoplasm","type":"exact"},{"name":"maxillofacial sinus tumor","type":"exact"},{"name":"maxillofacial sinus tumour","type":"exact"},{"name":"neoplasm of maxillary antrum","type":"exact"},{"name":"neoplasm of maxillary sinus","type":"exact"},{"name":"neoplasm of maxillofacial sinus","type":"exact"},{"name":"neoplasm of the maxillary antrum","type":"exact"},{"name":"neoplasm of the maxillary sinus","type":"exact"},{"name":"neoplasm of the maxillofacial sinus","type":"exact"},{"name":"tumor of maxillary antrum","type":"exact"},{"name":"tumor of maxillary sinus","type":"exact"},{"name":"tumor of maxillofacial sinus","type":"exact"},{"name":"tumor of the maxillary antrum","type":"exact"},{"name":"tumor of the maxillary sinus","type":"exact"},{"name":"tumor of the maxillofacial sinus","type":"exact"},{"name":"tumour of maxillary antrum","type":"exact"},{"name":"tumour of maxillary sinus","type":"exact"},{"name":"tumour of maxillofacial sinus","type":"exact"},{"name":"tumour of the maxillary antrum","type":"exact"},{"name":"tumour of the maxillary sinus","type":"exact"},{"name":"tumour of the maxillofacial sinus","type":"exact"}],"termid":"MONDO:0006850","xrefs":{"Monarch":{"xref_id":"0006850"}}}


id: MONDO:1010452
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dilated cardiomyopathy that occurs in rabbit.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dilated cardiomyopathy, non-human animal","termid":"MONDO:1010011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dilated cardiomyopathy, rabbit","secondary_identifiers":["OMIA:000162-9986"],"termid":"MONDO:1010452","xrefs":{"Monarch":{"xref_id":"1010452"}}}


id: PBO:0076802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tektin 3","termid":"PBO:0076802"}


id: GO:0007031
data:
  {"annotated_genes":["SJAG_02788","SJAG_04146","SJAG_00702","SJAG_02797","SJAG_04315","SJAG_01685","SJAG_01165","SJAG_00891","SJAG_04732","SJAG_03493","SJAG_02997","SJAG_02384","SJAG_03464","SJAG_05315","SJAG_04428","SJAG_02619","SJAG_02693","SJAG_04857","SJAG_05950","SJAG_04763","SJAG_03324","SJAG_03781","SJAG_03440","SJAG_00326","SJAG_02848","SJAG_02034"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[82101,101782,104591,120045],"is_not":false,"summary":null,"term":"GO:0007031"},{"annotations":[80240,79505,94016,101073],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016559"},{"annotations":[108524],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045033"},{"annotations":[71882,72395,81410,75060,73790,98290,104082,113246],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016558"},{"annotations":[75452,63446,72420],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016560"},{"annotations":[119174,117161,100386,65297],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016562"},{"annotations":[97245,113247,92239],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045046"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a peroxisome. A peroxisome is a small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle organization","termid":"GO:0006996"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00326":null,"SJAG_00702":null,"SJAG_00891":null,"SJAG_01165":null,"SJAG_01685":null,"SJAG_02034":null,"SJAG_02384":null,"SJAG_02619":null,"SJAG_02693":null,"SJAG_02788":null,"SJAG_02797":null,"SJAG_02848":null,"SJAG_02997":null,"SJAG_03324":null,"SJAG_03440":null,"SJAG_03464":null,"SJAG_03493":null,"SJAG_03781":null,"SJAG_04146":null,"SJAG_04315":null,"SJAG_04428":null,"SJAG_04732":null,"SJAG_04763":null,"SJAG_04857":null,"SJAG_05315":null,"SJAG_05950":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peroxisome organization","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"peroxisome organisation","type":"exact"},{"name":"peroxisome organization and biogenesis","type":"related"}],"termid":"GO:0007031","terms_by_termid":{"GO:0007031":null,"GO:0016558":null,"GO:0016559":null,"GO:0016560":null,"GO:0016562":null,"GO:0045033":null,"GO:0045046":null}}


id: GO:0102500
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: beta-D-glucose + a plant soluble heteroglycan = a plant soluble heteroglycan + maltose.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete beta-maltose 4-alpha-glucanotransferase activity (obsolete GO:0102500)","termid":"GO:0102500"}


id: PBO:0058157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4452","termid":"PBO:0058157"}


id: PR:Q9US06
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An RNA polymerase II-associated factor 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00697","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II-associated protein 1 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC664.03","secondary_identifiers":["UniProtKB:Q9US06"],"synonyms":[{"name":"Spom972h-PAF1","type":"exact"}],"termid":"PR:Q9US06"}


id: GO:0042825
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimer composed of the subunits TAP1 and TAP2 (transporter associated with antigen presentation). Functions in the transport of antigenic peptides from the cytosol to the lumen of the endoplasmic reticulum.","definition_xrefs":["GOC:jl","PMID:10618487","PMID:10631934"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"MHC class I peptide loading complex","termid":"GO:0042824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005789","GO:0005783","GO:0005575"],"is_obsolete":false,"name":"TAP complex","synonyms":[{"name":"transporter associated with antigen presentation","type":"exact"}],"termid":"GO:0042825"}


id: MONDO:0024877
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm involving a clitoris.","definition_xrefs":["MONDO:patterns/neoplasm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vulvar neoplasm","termid":"MONDO:0021049"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clitoris neoplasm","secondary_identifiers":["ICD9:239.5","MEDGEN:688068","SCTID:126925009","UMLS:C1263793"],"synonyms":[{"name":"clitoral neoplasm","type":"exact"},{"name":"clitoris tumor","type":"exact"},{"name":"clitoris tumour","type":"exact"},{"name":"neoplasm of clitoris","type":"exact"},{"name":"tumor of clitoris","type":"exact"},{"name":"tumour of clitoris","type":"exact"}],"termid":"MONDO:0024877","xrefs":{"Monarch":{"xref_id":"0024877"}}}


id: PBO:0077614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMSB4X pseudogene 5","termid":"PBO:0077614"}


id: MONDO:0013091
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A liver PhK deficiency caused by variants in the PHKG2 gene","direct_ancestors":[{"relation_name":"is_a","term_name":"glycogen storage disease due to liver phosphorylase kinase deficiency","termid":"MONDO:0020693"},{"relation_name":"is_a","term_name":"glycogen storage disease IX","termid":"MONDO:0700291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004335","MONDO:0037792","MONDO:0002515"],"is_obsolete":false,"name":"glycogen storage disease IXc","secondary_identifiers":["NANDO:2201166","GARD:18387","MEDGEN:442778","DOID:0111043","MESH:C567809","UMLS:C2751643","NANDO:1200849","OMIM:613027"],"synonyms":[{"name":"GSD IXc","type":"related"},{"name":"GSD type 9C","type":"exact"},{"name":"GSD type IXc","type":"exact"},{"name":"GSD9C","type":"exact"},{"name":"PHKG2 glycogen storage disease","type":"exact"},{"name":"PHKG2-related glycogen storage disease type IX","type":"exact"},{"name":"glycogen storage disease IXc","type":"exact"},{"name":"glycogen storage disease caused by mutation in PHKG2","type":"exact"},{"name":"glycogen storage disease type IXc","type":"exact"}],"termid":"MONDO:0013091","xrefs":{"Monarch":{"xref_id":"0013091"}}}


id: PBO:0091659
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ferric Reductase in Pombe","termid":"PBO:0091659"}


id: GO:0042568
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex of two proteins, which in animals is 50kDa and consists of the insulin-like growth factor (IGF) and one of the insulin-like growth factor binding protein-1 (IGFBP-1), -2 (IGFBP-2), -4 (IGFBP-4) and -6 (IGFBP-6). The complex plays a role in growth and development.","definition_xrefs":["GOC:jl","PMID:12239079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"insulin-like growth factor binding protein complex","termid":"GO:0016942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005576","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"insulin-like growth factor binary complex","synonyms":[{"name":"IGF binary complex","type":"exact"}],"termid":"GO:0042568"}


id: PBO:0040062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein 2/3 complex inhibitor","termid":"PBO:0040062"}


id: PR:Q10496
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A TBC1 domain family member 2B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase activating protein Gyp51 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26F1.09","secondary_identifiers":["UniProtKB:Q10496"],"synonyms":[{"name":"SPAC26F1.09","type":"related"},{"name":"Spom972h-TBC1D2B","type":"exact"}],"termid":"PR:Q10496"}


id: MONDO:0014972
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosome 19q13.11 deletion syndrome in which the proximal region was deleted.","direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 19q13.11 deletion syndrome","termid":"MONDO:0013090"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 19q13.11 deletion syndrome, proximal","secondary_identifiers":["UMLS:C4311046","MEDGEN:935013","OMIM:617219"],"termid":"MONDO:0014972","xrefs":{"Monarch":{"xref_id":"0014972"}}}


id: PBO:0057257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 484","termid":"PBO:0057257"}


id: PBO:0086858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative RNA exonuclease; possibly involved in pre-rRNA processing and ribosome assembly","termid":"PBO:0086858"}


id: GO:0045725
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of glycogen.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glycogen biosynthetic process","termid":"GO:0005979"},{"relation_name":"is_a","term_name":"positive regulation of macromolecule biosynthetic process","termid":"GO:0010557"},{"relation_name":"is_a","term_name":"positive regulation of glycogen metabolic process","termid":"GO:0070875"},{"relation_name":"positively_regulates","term_name":"glycogen biosynthetic process","termid":"GO:0005978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"positively_regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006091","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"positive regulation of glycogen biosynthetic process","synonyms":[{"name":"activation of glycogen biosynthetic process","type":"narrow"},{"name":"positive regulation of glycogen anabolism","type":"exact"},{"name":"positive regulation of glycogen biosynthesis","type":"exact"},{"name":"positive regulation of glycogen formation","type":"exact"},{"name":"positive regulation of glycogen synthesis","type":"exact"},{"name":"stimulation of glycogen biosynthetic process","type":"narrow"},{"name":"up regulation of glycogen biosynthetic process","type":"exact"},{"name":"up-regulation of glycogen biosynthetic process","type":"exact"},{"name":"upregulation of glycogen biosynthetic process","type":"exact"}],"termid":"GO:0045725"}


id: PBO:0043160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 28","termid":"PBO:0043160"}


id: MONDO:0011003
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial isolated dilated cardiomyopathy in which the cause of the disease is a mutation in the SCN5A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"familial isolated dilated cardiomyopathy","termid":"MONDO:0700335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dilated cardiomyopathy 1E","secondary_identifiers":["MESH:C563384","OMIM:601154","UMLS:C1832680","DOID:0110433","GARD:5644","MEDGEN:331341"],"synonyms":[{"name":"CDCD2","type":"exact"},{"name":"CMD1E","type":"exact"},{"name":"SCN5A familial isolated dilated cardiomyopathy","type":"exact"},{"name":"cardiomyopathy dilated with conduction defect type 2","type":"exact"},{"name":"cardiomyopathy, dilated, 1E","type":"exact"},{"name":"cardiomyopathy, dilated, type 1E","type":"exact"},{"name":"cardiomyopathy, dilated, with conduction defect 2","type":"exact"},{"name":"cardiomyopathy, dilated, with conduction disorder and arrhythmia","type":"exact"},{"name":"dilated cardiomyopathy type 1E","type":"exact"},{"name":"dilated cardiomyopathy with conduction defect 2","type":"exact"},{"name":"dilated cardiomyopathy with conduction disorder and arrhythmia","type":"exact"},{"name":"familial isolated dilated cardiomyopathy caused by mutation in SCN5A","type":"exact"}],"termid":"MONDO:0011003","xrefs":{"Monarch":{"xref_id":"0011003"}}}


id: PR:O13896
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase III subunit RPC10 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11239:SF2","PRO:DNx","OMA:SCHPO00468"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III subunit RPC10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22A12.05","secondary_identifiers":["UniProtKB:O13896"],"synonyms":[{"name":"DNA-directed RNA polymerases III 12.5 kDa polypeptide (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase III subunit C10 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase III subunit C11 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-POLR3K","type":"exact"}],"termid":"PR:O13896"}


id: PATO:0000945
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's exhibiting a downward bending of its leaves or other plant parts.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epinastic","termid":"PATO:0000945"}


id: MONDO:0008646
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete long QT syndrome 1 (obsolete MONDO:0008646)","termid":"MONDO:0008646","xrefs":{"Monarch":{"xref_id":"0008646"}}}


id: MONDO:0800446
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic, isolated constitutional thrombocytopenia disease characterized by impaired platelet aggregation resulting from a defect in thromboxane synthesis or signaling, manifesting with mild to moderate mucocutaneous, gastrointestinal or surgical bleeding (e.g. easy bruising, prolonged epistaxis, excessive bleeding after a tooth extraction).","definition_xrefs":["Orphanet:220443"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited bleeding disorder, platelet-type","termid":"MONDO:0000009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"bleeding diathesis due to thromboxane synthesis deficiency","secondary_identifiers":["MEDGEN:1678745","GARD:17132","icd11.foundation:1676860885","UMLS:C5190857"],"termid":"MONDO:0800446","xrefs":{"Monarch":{"xref_id":"0800446"}}}


id: GO:1903403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of renal phosphate excretion.","definition_xrefs":["GOC:TermGenie","PMID:8700837","GOC:pm","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of renal phosphate excretion","termid":"GO:1903402"},{"relation_name":"negatively_regulates","term_name":"renal phosphate excretion","termid":"GO:0044722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of renal phosphate excretion","synonyms":[{"name":"down regulation of renal phosphate excretion","type":"exact"},{"name":"down regulation of renal phosphate ion excretion","type":"exact"},{"name":"down-regulation of renal phosphate excretion","type":"exact"},{"name":"down-regulation of renal phosphate ion excretion","type":"exact"},{"name":"downregulation of renal phosphate excretion","type":"exact"},{"name":"downregulation of renal phosphate ion excretion","type":"exact"},{"name":"inhibition of renal phosphate excretion","type":"narrow"},{"name":"inhibition of renal phosphate ion excretion","type":"narrow"},{"name":"negative regulation of renal phosphate ion excretion","type":"exact"}],"termid":"GO:1903403"}


id: PBO:0063689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphogluconate dehydrogenase pseudogene 1","termid":"PBO:0063689"}


id: PBO:0044645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DC-STAMP domain containing 2","termid":"PBO:0044645"}


id: MONDO:0008443
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spastic paraplegia-precocious puberty syndrome is characterized by precocious puberty (due to Leydig cell hyperplasia), progressive spastic paraplegia and intellectual deficit. It has been described in two brothers. The fact that other family members displayed brisk reflexes and dysarthria suggested autosomal dominant inheritance with variable expression.","definition_xrefs":["Orphanet:2826"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant complex spastic paraplegia","termid":"MONDO:0015087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005559"],"is_obsolete":false,"name":"spastic paraplegia-precocious puberty syndrome","secondary_identifiers":["GARD:4918","UMLS:C1866850","OMIM:182820","MEDGEN:401096","MESH:C536874"],"synonyms":[{"name":"familial spastic paraplegia, intellectual disability, and precocious puberty","type":"related"},{"name":"familial spastic paraplegia, mental retardation, and precocious puberty","type":"related"},{"name":"precocious puberty with spastic paraplegia","type":"related"},{"name":"spastic paraplegia with precocious puberty","type":"related"}],"termid":"MONDO:0008443","xrefs":{"Monarch":{"xref_id":"0008443"}}}


id: PBO:0059314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L53 pseudogene 1","termid":"PBO:0059314"}


id: MONDO:1012832
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hyperkeratosis that occurs in dogs due to a mutation in the DSG1 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"hyperkeratosis, non-human animal","termid":"MONDO:1012976"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmoplantar hyperkeratosis, DSG1-related, dog","secondary_identifiers":["OMIA:002266-9615"],"synonyms":[{"name":"HFH","type":"exact"},{"name":"hereditary footpad hyperkeratosis, dog","type":"related"},{"name":"hyperkeratosis, palmoplantar, DSG1-related, dog","type":"exact"}],"termid":"MONDO:1012832","xrefs":{"Monarch":{"xref_id":"1012832"}}}


id: MONDO:0033558
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autoinflammation, immune dysregulation, and eosinophilia","secondary_identifiers":["OMIM:618999","MEDGEN:1750270","UMLS:C5436572"],"synonyms":[{"name":"AIIDE","type":"related"},{"name":"AUTOINFLAMMATION, IMMUNE DYSREGULATION, AND EOSINOPHILIA","type":"related"},{"name":"Atopic Dermatitis, Enteritis, Colitis, and Eosinophilia","type":"related"}],"termid":"MONDO:0033558","xrefs":{"Monarch":{"xref_id":"0033558"}}}


id: GO:0032932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the depolymerization of astral microtubules.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of microtubule depolymerization","termid":"GO:0007026"},{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"regulation of spindle organization","termid":"GO:0090224"},{"relation_name":"negatively_regulates","term_name":"astral microtubule depolymerization","termid":"GO:0060172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0007049","GO:0000226"],"is_obsolete":false,"name":"negative regulation of astral microtubule depolymerization","synonyms":[{"name":"astral microtubule stabilization","type":"exact"}],"termid":"GO:0032932"}


id: PBO:0042807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"competing endogenous lncRNA 1 for miR-4707-5p and miR-4767","termid":"PBO:0042807"}


id: PBO:0065117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase C theta","termid":"PBO:0065117"}


id: PBO:0071275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL24 pseudogene 9","termid":"PBO:0071275"}


id: PBO:0060144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-methyltetrahydrofolate-homocysteine methyltransferase","termid":"PBO:0060144"}


id: GO:0098629
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process which results in the assembly, arrangement of constituent parts, or disassembly of a trans-Golgi network membrane.","definition_xrefs":["PMID:23345439","GOC:di","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"trans-Golgi network membrane organization","termid":"GO:0098629"}


id: GO:0050079
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-oxopropanoate = propynoate + H2O.","definition_xrefs":["RHEA:17957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"acetylenecarboxylate hydratase activity","secondary_identifiers":["GO:0047607","EC:4.2.1.27","MetaCyc:MALONATE-SEMIALDEHYDE-DEHYDRATASE-RXN"],"synonyms":[{"name":"3-oxopropanoate hydro-lyase (propynoate-forming)","type":"related"},{"name":"3-oxopropanoate hydro-lyase activity","type":"related"},{"name":"acetylenecarboxylate hydratase activity, producing malonate-semialdehyde","type":"narrow"},{"name":"acetylenemonocarboxylate hydrase activity","type":"related"},{"name":"acetylenemonocarboxylate hydratase activity","type":"broad"},{"name":"acetylmonocarboxylic acid hydrase activity","type":"related"},{"name":"alkynoate hydratase activity","type":"broad"},{"name":"malonate-semialdehyde dehydratase activity","type":"related"}],"termid":"GO:0050079"}


id: PBO:0069990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1285, pseudogene","termid":"PBO:0069990"}


id: PBO:0051912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit beta 1","termid":"PBO:0051912"}


id: PBO:0079722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin domain containing 2","termid":"PBO:0079722"}


id: PBO:0087692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC); contributes to nucleocytoplasmic transport and NPC biogenesis and is involved in establishment of a normal nucleocytoplasmic concentration gradient of the GTPase Gsp1p; also plays roles in several processes that may require localization of genes or chromosomes at the nuclear periphery, including double-strand break repair, transcription and chromatin silencing; homologous to human NUP85 aka NUP75","termid":"PBO:0087692"}


id: PBO:0058987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MLLT10 pseudogene 1","termid":"PBO:0058987"}


id: PBO:0052600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin subunit alpha 7","termid":"PBO:0052600"}


id: FYPO:0003702
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the microtubule cytoskeleton is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal microtubule cytoskeleton morphology during vegetative growth","synonyms":[{"name":"normal microtubule cytoskeleton morphology during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003702"}


id: PBO:0042429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 37, HSP90 cochaperone","termid":"PBO:0042429"}


id: MONDO:0031028
data:
  {"annotated_genes":["SJAG_03634","SJAG_03278","SJAG_00567"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88650,88651,88652],"is_not":false,"summary":null,"term":"MONDO:0031028"}]},"cv_name":"mondo","definition":"A developmental and epileptic encephalopathy characterized by onset of seizures and pituitary insufficiency in the first weeks or months of life with profoundly impaired development that has material basis in homozygous or compound heterozygous mutation in the HID1 gene on chromosome 17q25.","definition_xrefs":["DOID:0070391"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genetic developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00567":null,"SJAG_03278":null,"SJAG_03634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy 105 with hypopituitarism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1823963","UMLS:C5774190","OMIM:619983"],"synonyms":[{"name":"DEE105","type":"exact"},{"name":"developmental and epileptic encephalopathy 105 with hypopituitarism","type":"exact"}],"termid":"MONDO:0031028","terms_by_termid":{"MONDO:0031028":null},"xrefs":{"Monarch":{"xref_id":"0031028"}}}


id: PBO:0083944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gamma-glutamyl phosphate reductase; catalyzes the second step in proline biosynthesis","termid":"PBO:0083944"}


id: GO:0035945
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The set of processes involved in identifying and degrading defective or aberrant non-coding RNA transcripts (ncRNAs) within the mitochondrion.","definition_xrefs":["GOC:ans","PMID:19864255"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial RNA surveillance","termid":"GO:2000827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mitochondrial ncRNA surveillance","synonyms":[{"name":"mitochondrial aberrant ncRNA catabolic process","type":"exact"},{"name":"mitochondrial ncRNA quality control","type":"exact"},{"name":"mitochondrial non-coding RNA surveillance","type":"exact"}],"termid":"GO:0035945"}


id: PBO:0035956
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_methylation_during_vegetative_growth","termid":"PBO:0035956"}


id: PBO:0044438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily F member 3","termid":"PBO:0044438"}


id: GO:0001831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenesis of trophectoderm cells.","definition_xrefs":["ISBN:0124020607","ISBN:0198542771","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis","termid":"GO:0000902"},{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"trophectodermal cell differentiation","termid":"GO:0001829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trophectodermal cellular morphogenesis","synonyms":[{"name":"trophectoderm cellular morphogenesis","type":"exact"}],"termid":"GO:0001831"}


id: PBO:0075693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"steroid 5 alpha-reductase 3","termid":"PBO:0075693"}


id: GO:0035971
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of phosphoric residues from peptidyl-O-phospho-L-histidine to form peptidyl-histidine.","definition_xrefs":["GOC:BHF","GOC:vk","PMID:12383260"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein dephosphorylation","termid":"GO:0006470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-histidine dephosphorylation","termid":"GO:0035971"}


id: MONDO:0020665
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cancer","termid":"MONDO:0004992"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"high grade malignant neoplasm","secondary_identifiers":["MEDGEN:234350","NCIT:C36046","UMLS:C1334017"],"synonyms":[{"name":"high grade malignant neoplasm","type":"exact"}],"termid":"MONDO:0020665","xrefs":{"Monarch":{"xref_id":"0020665"}}}


id: PBO:0001602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved protein, UPF0047 family","termid":"PBO:0001602"}


id: MONDO:0700162
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A granular cell tumor occurring in a dog.","definition_xrefs":["NCIT:C158784"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canine glioma","termid":"MONDO:0700151"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canine granular cell tumor","termid":"MONDO:0700162","xrefs":{"Monarch":{"xref_id":"0700162"}}}


id: GO:0044615
data:
  {"annotated_genes":["SJAG_03593","SJAG_05243","SJAG_03300","SJAG_02274","SJAG_01584","SJAG_04645"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[61496,77808,90809,96794,116752,117411],"is_not":false,"summary":null,"term":"GO:0044615"}]},"cv_name":"cellular_component","definition":"A filamentous, cage-like assembly on the nuclear face of the nuclear pore complex (NPC). In S. cerevisiae, Mlp1p and Mlp2p are two major components of the NPC nuclear basket. In vertebrates, Tpr is a major component.","definition_xrefs":["GOC:dgf","PMID:19524430","PMID:18046406","PMID:22419078","PMID:20947011"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear pore","termid":"GO:0005643"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01584":null,"SJAG_02274":null,"SJAG_03300":null,"SJAG_03593":null,"SJAG_04645":null,"SJAG_05243":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005643"}],"interesting_parent_ids":["GO:0032991","GO:0005643","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"nuclear pore nuclear basket","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0044615","terms_by_termid":{"GO:0044615":null}}


id: PBO:0040613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAR/IMD domain containing adaptor protein 2 like 2","termid":"PBO:0040613"}


id: FYPO:0002283
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of tyrosine residues in one or more specific proteins, or of specific protein sites, does not occur during a cellular response to heat.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete abolished protein tyrosine phosphorylation during cellular response to heat (obsolete FYPO:0002283)","synonyms":[{"name":"abolished protein tyrosine phosphorylation during cellular response to heat during mitotic cell cycle","type":"related"},{"name":"abolished protein tyrosine phosphorylation during cellular response to heat during vegetative growth","type":"exact"},{"name":"abolished protein tyrosine phosphorylation during cellular response to heat shock","type":"narrow"},{"name":"protein phosphorylation abolished during cellular response to heat","type":"exact"}],"termid":"FYPO:0002283"}


id: GO:1901873
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of post-translational protein modification.","definition_xrefs":["PMID:21209915","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein modification process","termid":"GO:0031399"},{"relation_name":"regulates","term_name":"post-translational protein modification","termid":"GO:0043687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of post-translational protein modification","synonyms":[{"name":"regulation of PTM","type":"exact"},{"name":"regulation of post-translational amino acid modification","type":"exact"},{"name":"regulation of post-translational modification","type":"exact"},{"name":"regulation of posttranslational amino acid modification","type":"exact"},{"name":"regulation of posttranslational modification","type":"exact"},{"name":"regulation of posttranslational protein modification","type":"exact"}],"termid":"GO:1901873"}


id: PBO:0082761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the SF3b subcomplex of the U2 snRNP; zinc cluster protein involved in pre-mRNA splicing and cycloheximide resistance","termid":"PBO:0082761"}


id: PBO:0055900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 23","termid":"PBO:0055900"}


id: PBO:0040235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATF6 divergent transcript","termid":"PBO:0040235"}


id: PBO:0111812
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-C2HC5 type","termid":"PBO:0111812"}


id: SO:1000089
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The sequence variant at RNA level does not lead to any change in polypeptide.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000089 sequence_variant_causing_no_change_of_translational_product (obsolete SO:1000089)","synonyms":[{"name":"mutation causing no change of translational product","type":"related"},{"name":"sequence variant causing no change of translational product","type":"exact"}],"termid":"SO:1000089"}


id: GO:0016899
data:
  {"annotated_genes":["SJAG_00265"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77926],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003885"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces an oxygen molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00265":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:1.1.3.-"],"termid":"GO:0016899","terms_by_termid":{"GO:0003885":null}}


id: PBO:0047958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, folic acid type, rare, fra(22)(q13)","termid":"PBO:0047958"}


id: MONDO:0012244
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"prostate cancer, hereditary","termid":"MONDO:0700275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"prostate cancer, hereditary, 5","secondary_identifiers":["OMIM:609299","MEDGEN:373085","GARD:15455","MESH:C563744","UMLS:C1836436"],"synonyms":[{"name":"HPC5","type":"related"},{"name":"prostate cancer, hereditary, 5","type":"exact"},{"name":"prostate cancer, hereditary, type 5","type":"exact"}],"termid":"MONDO:0012244","xrefs":{"Monarch":{"xref_id":"0012244"}}}


id: PBO:0087226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Second-largest subunit of RNA polymerase III; RNA polymerase III is responsible for the transcription of tRNA and 5S RNA genes, and other low molecular weight RNAs","termid":"PBO:0087226"}


id: SO:1000110
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A mutation that reverts the sequence of a previous frameshift mutation back to the initial frame.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000110 frame_restoring_sequence_variant (obsolete SO:1000110)","synonyms":[{"name":"frame restoring mutation","type":"exact"},{"name":"frame restoring sequence variant","type":"exact"}],"termid":"SO:1000110"}


id: PBO:0018283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med21","termid":"PBO:0018283"}


id: SO:0001480
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of sequence from the end of a PAC clone that may provide a highly specific marker.","definition_xrefs":["ZFIN:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"read","termid":"SO:0000150"},{"relation_name":"part_of","term_name":"PAC","termid":"SO:0000154"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAC_end","synonyms":[{"name":"PAC end","type":"exact"}],"termid":"SO:0001480"}


id: FYPO:0005627
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the duration of cell cycle arrest or delay due to regulation by any mitotic DNA damage checkpoint is greater than in wild type during a cellular response to ultraviolet (UV) light, when cells are exposed to UV during S phase of the mitotic cell cycle.","definition_xrefs":["PMID:26652183","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased duration of mitotic DNA damage checkpoint during cellular response to UV","termid":"FYPO:0003445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000298","FYPO:0000631","FYPO:0001320"],"is_obsolete":false,"name":"increased duration of mitotic DNA damage checkpoint during cellular response to UV during mitotic S phase","synonyms":[{"name":"delayed DNA damage checkpoint deactivation during cellular response to UV during mitotic S phase","type":"exact"},{"name":"increased duration of mitotic DNA damage checkpoint after UV irradiation during S phase","type":"exact"},{"name":"increased duration of mitotic DNA damage checkpoint during cellular response to S phase exposure to UV","type":"exact"},{"name":"prolonged DNA damage checkpoint during cellular response to UV during mitotic S phase","type":"exact"}],"termid":"FYPO:0005627"}


id: MONDO:0033658
data:
  {"annotated_genes":["SJAG_04960"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87544],"is_not":false,"summary":null,"term":"MONDO:0033658"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with seizures and brain atrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18531","OMIM:619072","UMLS:C5436732","MEDGEN:1748227"],"synonyms":[{"name":"NEDSEBA","type":"exact"}],"termid":"MONDO:0033658","terms_by_termid":{"MONDO:0033658":null},"xrefs":{"Monarch":{"xref_id":"0033658"}}}


id: FYPO:0001783
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the nucleus is longer than normal and is constricted in the middle, resembling a figure 8.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"elongated nucleus during vegetative growth","termid":"FYPO:0000832"},{"relation_name":"has_part","term_name":"constricted nucleus","termid":"FYPO:0001782"},{"relation_name":"is_a","term_name":"elongated nucleus during vegetative growth","termid":"FYPO:0000832"},{"relation_name":"is_a","term_name":"constricted nucleus","termid":"FYPO:0001782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0002403","FYPO:0001320"],"is_obsolete":false,"name":"elongated, constricted nucleus","synonyms":[{"name":"elongated, constricted nuclei","type":"exact"},{"name":"elongated, constricted nucleus during mitotic cell cycle","type":"related"},{"name":"elongated, constricted nucleus during vegetative growth","type":"exact"},{"name":"long constricted nucleus","type":"exact"}],"termid":"FYPO:0001783"}


id: PBO:0074575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 31","termid":"PBO:0074575"}


id: PBO:0064093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pitrilysin metallopeptidase 1","termid":"PBO:0064093"}


id: PBO:0052736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 28","termid":"PBO:0052736"}


id: GO:0008463
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-formyl-L-methionine + H2O = L-methionine + formate.","definition_xrefs":["RHEA:17781","EC:3.5.1.31"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"formylmethionine deformylase activity","secondary_identifiers":["MetaCyc:FORMYLMETHIONINE-DEFORMYLASE-RXN","KEGG_REACTION:R00653"],"synonyms":[{"name":"N-formyl-L-methionine amidohydrolase activity","type":"related"}],"termid":"GO:0008463"}


id: PBO:0027387
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_in_stationary_phase","termid":"PBO:0027387"}


id: GO:0097337
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ziprasidone stimulus. Ziprasidone is a piperazine compound having 1,2-benzothiazol-3-yl- and 2-(6-chloro-1,3-dihydro-2-oxindol-5-yl)ethyl substituents attached to the nitrogen atoms.","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to ziprasidone","termid":"GO:0097337"}


id: GO:0080139
data:
  {"annotated_genes":["SJAG_01183"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71974],"is_not":false,"summary":null,"term":"GO:0080139"}]},"cv_name":"molecular_function","definition":"Enables the transfer of borate from the inside of the cell to the outside of the cell across a membrane.","definition_xrefs":["PMID:18603465"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transmembrane transporter activity","termid":"GO:0015103"},{"relation_name":"is_a","term_name":"efflux transmembrane transporter activity","termid":"GO:0015562"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"borate efflux transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"boron efflux transmembrane transporter activity","type":"related"}],"termid":"GO:0080139","terms_by_termid":{"GO:0080139":null}}


id: PBO:0057026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR124-2 host gene","termid":"PBO:0057026"}


id: MONDO:0016790
data:
  {"annotated_genes":["SJAG_02464","SJAG_04843","SJAG_03588","SJAG_01630"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87209],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011730"},{"annotations":[88235,88234],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013802"},{"annotations":[88819],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008759"}]},"cv_name":"mondo","definition":"An inherited metabolic disease that is has its basis in the disruption of tricarboxylic acid cycle.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of energy metabolism","termid":"MONDO:0019243"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01630":null,"SJAG_02464":null,"SJAG_03588":null,"SJAG_04843":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"tricarboxylic acid cycle disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:20753","MEDGEN:1843282","Orphanet:254749","UMLS:C5679646"],"synonyms":[{"name":"Krebs cycle disorder","type":"exact"},{"name":"TCA cycle disorder","type":"exact"},{"name":"citric acid cycle disorder","type":"exact"},{"name":"inborn error of tricarboxylic acid cycle","type":"exact"},{"name":"inborn tricarboxylic acid cycle disorder","type":"exact"},{"name":"rare inborn error of tricarboxylic acid cycle","type":"exact"}],"termid":"MONDO:0016790","terms_by_termid":{"MONDO:0008759":null,"MONDO:0011730":null,"MONDO:0013802":null},"xrefs":{"Monarch":{"xref_id":"0016790"}}}


id: PBO:0117415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zDHHC palmitoyltransferase 11","termid":"PBO:0117415"}


id: GO:0016695
data:
  {"annotated_genes":["SJAG_02497"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[116624],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008901"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which hydrogen acts as an electron donor.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02497":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on hydrogen as donor","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.12.-.-"],"synonyms":[{"name":"oxidoreductase activity, acting on hydrogen as donor, other acceptors","type":"narrow"}],"termid":"GO:0016695","terms_by_termid":{"GO:0008901":null}}


id: PBO:0088655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone lysine H3-K4 methyltransferase Set1","termid":"PBO:0088655"}


id: GO:0051412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a corticosterone stimulus. Corticosterone is a 21 carbon steroid hormone of the corticosteroid type, produced in the cortex of the adrenal glands. In many species, corticosterone is the principal glucocorticoid, involved in regulation of fuel metabolism, immune reactions, and stress responses.","definition_xrefs":["PMID:15240347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to glucocorticoid","termid":"GO:0051384"},{"relation_name":"is_a","term_name":"response to mineralocorticoid","termid":"GO:0051385"},{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to corticosterone","synonyms":[{"name":"response to corticosterone stimulus","type":"exact"}],"termid":"GO:0051412"}


id: PBO:0060908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEUROG2 and ZGRF1 antisense RNA 1","termid":"PBO:0060908"}


id: MONDO:0002403
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cancer that involves the layer of synovial tissue.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system cancer","termid":"MONDO:0000637"},{"relation_name":"is_a","term_name":"synovium neoplasm","termid":"MONDO:0002528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"synovium cancer","secondary_identifiers":["MEDGEN:277340","UMLS:C1334624","DOID:2706","NCIT:C6531"],"synonyms":[{"name":"cancer of layer of synovial tissue","type":"exact"},{"name":"cancer of synovial membrane of synovial joint","type":"exact"},{"name":"layer of synovial tissue cancer","type":"exact"},{"name":"malignant layer of synovial tissue neoplasm","type":"exact"},{"name":"malignant neoplasm of layer of synovial tissue","type":"exact"},{"name":"malignant neoplasm of synovial membrane of synovial joint","type":"exact"},{"name":"malignant neoplasm of synovium","type":"exact"},{"name":"malignant neoplasm of the synovium","type":"exact"},{"name":"malignant synovial membrane of synovial joint neoplasm","type":"exact"},{"name":"malignant synovial neoplasm","type":"exact"},{"name":"malignant synovial tumor","type":"exact"},{"name":"malignant synovial tumour","type":"exact"},{"name":"malignant tumor of synovium","type":"exact"},{"name":"malignant tumor of the synovium","type":"exact"},{"name":"malignant tumour of synovium","type":"exact"},{"name":"malignant tumour of the synovium","type":"exact"},{"name":"synovial membrane of synovial joint cancer","type":"exact"}],"termid":"MONDO:0002403","xrefs":{"Monarch":{"xref_id":"0002403"}}}


id: GO:0031229
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the nuclear inner membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of nuclear inner membrane (obsolete GO:0031229)","synonyms":[{"name":"intrinsic to nuclear inner membrane","type":"narrow"}],"termid":"GO:0031229"}


id: GO:0090443
data:
  {"annotated_genes":["SJAG_06270","SJAG_01790","SJAG_02514","SJAG_03508","SJAG_00229","SJAG_04455"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72257,76350,97450,103085,109372,112015],"is_not":false,"summary":null,"term":"GO:0090443"}]},"cv_name":"cellular_component","definition":"A conserved protein phosphatase type 2A complex which contains a protein phosphatase type 2A, a protein phosphatase regulatory subunit, a striatin, an FHA domain protein and other subunits (at least six proteins). In fission yeast this complex negatively regulate the septation initiation network at the spindle pole body.","definition_xrefs":["PMID:21561862","GOC:vw","PMID:22119525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00229":null,"SJAG_01790":null,"SJAG_02514":null,"SJAG_03508":null,"SJAG_04455":null,"SJAG_06270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"FAR/SIN/STRIPAK complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"FAR complex","type":"related"},{"name":"SIN inhibitory phosphatase (SIP) complex","type":"exact"},{"name":"SIN inhibitory phosphatase complex","type":"exact"},{"name":"SIP complex","type":"exact"},{"name":"STRIPAK signalling complex","type":"related"},{"name":"striatin interacting phosphatase and kinase complex","type":"exact"}],"termid":"GO:0090443","terms_by_termid":{"GO:0090443":null}}


id: GO:1905381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of snRNA transcription mediated by RNA polymerase II.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:bhm","PMID:10022900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transcription by RNA polymerase II","termid":"GO:0000122"},{"relation_name":"is_a","term_name":"regulation of snRNA transcription by RNA polymerase II","termid":"GO:1905380"},{"relation_name":"negatively_regulates","term_name":"snRNA transcription by RNA polymerase II","termid":"GO:0042795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0016073"},{"rel_name":"negatively_regulates","termid":"GO:0016073"},{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006351","GO:0006355","GO:0008150","GO:0016073","GO:0010467"],"is_obsolete":false,"name":"negative regulation of snRNA transcription by RNA polymerase II","synonyms":[{"name":"down regulation of snRNA transcription from Pol II promoter","type":"exact"},{"name":"down regulation of snRNA transcription from RNA polymerase II promoter","type":"exact"},{"name":"down-regulation of snRNA transcription from Pol II promoter","type":"exact"},{"name":"down-regulation of snRNA transcription from RNA polymerase II promoter","type":"exact"},{"name":"downregulation of snRNA transcription from Pol II promoter","type":"exact"},{"name":"downregulation of snRNA transcription from RNA polymerase II promoter","type":"exact"},{"name":"inhibition of snRNA transcription from Pol II promoter","type":"narrow"},{"name":"inhibition of snRNA transcription from RNA polymerase II promoter","type":"narrow"},{"name":"negative regulation of snRNA transcription from Pol II promoter","type":"exact"},{"name":"negative regulation of snRNA transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1905381"}


id: MONDO:0006222
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant germ cell tumor that arises from the stomach. It is characterized by the presence of syncytiotrophoblast and cytotrophoblast cellular components. It is often associated with lymph node and hematogenous metastases.","definition_xrefs":["NCIT:C95749"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant gastric germ cell tumor","termid":"MONDO:0003112"},{"relation_name":"is_a","term_name":"extragonadal nonseminomatous germ cell tumor","termid":"MONDO:0003578"},{"relation_name":"is_a","term_name":"choriocarcinoma","termid":"MONDO:0005207"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"gastric choriocarcinoma","secondary_identifiers":["EFO:1000269","MEDGEN:459624","UMLS:C2987398"],"synonyms":[{"name":"gastric choriocarcinoma","type":"exact"}],"termid":"MONDO:0006222","xrefs":{"Monarch":{"xref_id":"0006222"}}}


id: PBO:0041833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer susceptibility 9","termid":"PBO:0041833"}


id: GO:1901044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any protein polyubiquitination that is involved in nucleus-associated proteasomal ubiquitin-dependent protein catabolic process.","definition_xrefs":["GOC:al","GOC:TermGenie","PMID:21324894"],"gene_count":0,"genotype_count":0,"name":"obsolete protein polyubiquitination involved in nucleus-associated proteasomal ubiquitin-dependent protein catabolic process (obsolete GO:1901044)","termid":"GO:1901044"}


id: PBO:0042599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CMT1A duplicated region transcript 15","termid":"PBO:0042599"}


id: PBO:0030991
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nucleosome_positioning_in_euchromatin","termid":"PBO:0030991"}


id: PBO:0085714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein Involved in spore wall assembly; localizes to lipid droplets found on or outside of the prospore membrane; shares similarity with Lds2p and Rrt8p, and a strain mutant for all 3 genes exhibits reduced dityrosine fluorescence relative to the single mutants","termid":"PBO:0085714"}


id: MONDO:0022946
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deafness progressive cataract autosomal dominant","termid":"MONDO:0022946","xrefs":{"Monarch":{"xref_id":"0022946"}}}


id: GO:0046134
data:
  {"annotated_genes":["SJAG_05029","SJAG_04264","SJAG_00694"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99552,115676],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043097"},{"annotations":[75065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046132"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of one of a family of organic molecules consisting of a pyrimidine base covalently bonded to a sugar ribose (a ribonucleoside) or deoxyribose (a deoxyribonucleoside).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside metabolic process","termid":"GO:0006213"},{"relation_name":"is_a","term_name":"nucleoside biosynthetic process","termid":"GO:0009163"},{"relation_name":"is_a","term_name":"pyrimidine-containing compound biosynthetic process","termid":"GO:0072528"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00694":null,"SJAG_04264":null,"SJAG_05029":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"pyrimidine nucleoside biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-500753"],"synonyms":[{"name":"pyrimidine nucleoside anabolism","type":"exact"},{"name":"pyrimidine nucleoside biosynthesis","type":"exact"},{"name":"pyrimidine nucleoside formation","type":"exact"},{"name":"pyrimidine nucleoside synthesis","type":"exact"}],"termid":"GO:0046134","terms_by_termid":{"GO:0043097":null,"GO:0046132":null}}


id: FYPO:0004602
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of all or part of the linear element is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component","termid":"FYPO:0001233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal linear element morphology","termid":"FYPO:0004602"}


id: GO:0010586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving miRNA, microRNA, a class of single-stranded RNA molecules of about 21-23 nucleotides in length, which regulates gene expression.","definition_xrefs":["PMID:17993620"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA metabolic process","termid":"GO:0016070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"miRNA metabolic process","secondary_identifiers":["Reactome:R-HSA-203927"],"synonyms":[{"name":"microRNA metabolic process","type":"exact"}],"termid":"GO:0010586"}


id: GO:0016720
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (9Z,12Z)-octadecadienoyl-containing glycerolipid + 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 = a (9Z)-octadec-9-en-12-ynoyl-containing glycerolipid + 2 Fe(III)-[cytochrome b5] + 2 H2O.","definition_xrefs":["RHEA:46552"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"acyl-lipid Delta(12)-acetylenase","secondary_identifiers":["EC:1.14.19.39","KEGG_REACTION:R05740","MetaCyc:1.14.99.33-RXN"],"synonyms":[{"name":"D12-fatty acid dehydrogenase activity","type":"exact"},{"name":"Delta12 fatty acid acetylenase","type":"exact"},{"name":"delta12-fatty acid dehydrogenase activity","type":"related"},{"name":"linoleate delta-12-fatty acid acetylenase (desaturase) activity","type":"exact"}],"termid":"GO:0016720"}


id: GO:0000467
data:
  {"annotated_genes":["SJAG_01521","SJAG_01818","SJAG_04369","SJAG_00081","SJAG_01191","SJAG_04818","SJAG_04824","SJAG_00854","SJAG_03179","SJAG_03745","SJAG_04321","SJAG_04006","SJAG_04084","SJAG_02993","SJAG_04153"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72367,73065,73360,74185,76820,79431,81200,91794,99053,100757,103899,108298,109290,117305,117744],"is_not":false,"summary":null,"term":"GO:0000467"}]},"cv_name":"biological_process","definition":"Exonucleolytic digestion of a pre-rRNA molecule to generate the mature 3'-end of a 5.8S rRNA molecule derived from an originally tricistronic pre-rRNA transcript that contained the Small Subunit (SSU) rRNA, the 5.8S rRNA, and the Large Subunit (LSU) rRNA in that order from 5' to 3' along the primary transcript.","definition_xrefs":["PMID:10690410","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA 3'-end processing","termid":"GO:0031125"},{"relation_name":"part_of","term_name":"maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000466"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00081":null,"SJAG_00854":null,"SJAG_01191":null,"SJAG_01521":null,"SJAG_01818":null,"SJAG_02993":null,"SJAG_03179":null,"SJAG_03745":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04321":null,"SJAG_04369":null,"SJAG_04818":null,"SJAG_04824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0042254","GO:0008150","GO:0010467","GO:0044085"],"is_obsolete":false,"name":"exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0000467","terms_by_termid":{"GO:0000467":null}}


id: PBO:0059281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L39","termid":"PBO:0059281"}


id: PBO:0063157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paired box 3","termid":"PBO:0063157"}


id: GO:1900552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving asperfuranone.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide metabolic process","termid":"GO:0030638"},{"relation_name":"is_a","term_name":"diol metabolic process","termid":"GO:0034311"},{"relation_name":"is_a","term_name":"ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"tertiary alcohol metabolic process","termid":"GO:1902644"},{"relation_name":"is_a","term_name":"secondary alcohol metabolic process","termid":"GO:1902652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"asperfuranone metabolic process","synonyms":[{"name":"asperfuranone metabolism","type":"exact"}],"termid":"GO:1900552"}


id: GO:0052372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism modulates the frequency, rate or extent to which it enters into the host organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological process involved in symbiotic interaction","termid":"GO:0043903"},{"relation_name":"regulates","term_name":"symbiont entry into host","termid":"GO:0044409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation by symbiont of entry into host","secondary_identifiers":["GO:0052371"],"synonyms":[{"name":"modulation by organism of entry into other organism during symbiotic interaction","type":"related"},{"name":"regulation by organism of entry into other organism during symbiotic interaction","type":"related"},{"name":"regulation by organism of entry into other organism involved in symbiotic interaction","type":"related"}],"termid":"GO:0052372"}


id: MONDO:0000726
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A scoliosis with no known cause.","definition_xrefs":["DOID:0060250","PMID:25954032"],"direct_ancestors":[{"relation_name":"is_a","term_name":"scoliosis","termid":"MONDO:0005392"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"idiopathic scoliosis","secondary_identifiers":["UMLS:C0595995","MEDGEN:671079","SCTID:203639008"],"termid":"MONDO:0000726","xrefs":{"Monarch":{"xref_id":"0000726"}}}


id: PBO:0081945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc and ring finger 1","termid":"PBO:0081945"}


id: PATO:0002443
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's being located at the same level as another entity.","definition_xrefs":["PATOC:NI"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"level with","termid":"PATO:0002443"}


id: PBO:0066162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome binding factor A","termid":"PBO:0066162"}


id: MONDO:0016744
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete primary melanocytic tumor of central nervous system (obsolete MONDO:0016744)","secondary_identifiers":["Orphanet:252028"],"synonyms":[{"name":"primary melanocytic lesion of CNS","type":"exact"},{"name":"primary melanocytic lesion of central nervous system","type":"exact"},{"name":"primary melanocytic tumor of CNS","type":"exact"},{"name":"primary melanocytic tumour of CNS","type":"exact"}],"termid":"MONDO:0016744","xrefs":{"Monarch":{"xref_id":"0016744"}}}


id: MONDO:0020133
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete non-syndromic central nervous system malformation (obsolete MONDO:0015219)","termid":"MONDO:0015219"}],"gene_count":0,"genotype_count":0,"name":"obsolete posterior fossa malformation (obsolete MONDO:0020133)","secondary_identifiers":["Orphanet:98519"],"termid":"MONDO:0020133","xrefs":{"Monarch":{"xref_id":"0020133"}}}


id: PBO:0054231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1613","termid":"PBO:0054231"}


id: PBO:0058807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7849","termid":"PBO:0058807"}


id: GO:0090373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of the directed movement of glycerol into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:dph","GOC:tb","GOC:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transmembrane transport","termid":"GO:0034763"},{"relation_name":"is_a","term_name":"regulation of glycerol transport","termid":"GO:0090371"},{"relation_name":"negatively_regulates","term_name":"glycerol transmembrane transport","termid":"GO:0015793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of glycerol transport","termid":"GO:0090373"}


id: PBO:0017798
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PEp Transporter","termid":"PBO:0017798"}


id: GO:0050487
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl phosphate + H+ + sulfite = phosphate + sulfoacetaldehyde.","definition_xrefs":["RHEA:24204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, acyl groups converted into alkyl on transfer","termid":"GO:0046912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"sulfoacetaldehyde acetyltransferase activity","secondary_identifiers":["EC:2.3.3.15","KEGG_REACTION:R05651","MetaCyc:RXN-2364"],"synonyms":[{"name":"acetyl-phosphate:sulfite S-acetyltransferase (acyl-phosphate hydrolysing, 2-oxoethyl-forming)","type":"related"},{"name":"sulphoacetaldehyde acetyltransferase activity","type":"exact"}],"termid":"GO:0050487"}


id: MONDO:0008647
data:
  {"annotated_genes":["SJAG_03703","SJAG_02431"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86949,86950],"is_not":false,"summary":null,"term":"MONDO:0008647"}]},"cv_name":"mondo","definition":"Any hypertrophic cardiomyopathy in which the cause of the disease is a mutation in the MYH7 gene.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hypertrophic cardiomyopathy","termid":"MONDO:0024573"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"hypertrophic cardiomyopathy 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0110307","UMLS:C3495498","MEDGEN:501195","OMIM:192600"],"synonyms":[{"name":"CMH1","type":"exact"},{"name":"Cmh","type":"related"},{"name":"MYH7 hypertrophic cardiomyopathy","type":"exact"},{"name":"asymmetric septal Hypertrophy","type":"related"},{"name":"cardiomyopathy, familial hypertrophic 1","type":"exact"},{"name":"cardiomyopathy, familial hypertrophic, 1","type":"related"},{"name":"cardiomyopathy, familial hypertrophic, Autosomal dominant, Digenic dominant","type":"exact"},{"name":"cardiomyopathy, familial hypertrophic, type 1","type":"exact"},{"name":"cardiomyopathy, hypertrophic, 1, Autosomal dominant, Digenic dominant","type":"exact"},{"name":"cardiomyopathy, hypertrophic, 1, digenic, Autosomal dominant, Digenic dominant","type":"exact"},{"name":"hypertrophic cardiomyopathy 1","type":"exact"},{"name":"hypertrophic cardiomyopathy caused by mutation in MYH7","type":"exact"},{"name":"hypertrophic cardiomyopathy type 1","type":"exact"},{"name":"hypertrophic subaortic stenosis, idiopathic","type":"related"},{"name":"ventricular Hypertrophy, hereditary","type":"related"}],"termid":"MONDO:0008647","terms_by_termid":{"MONDO:0008647":null},"xrefs":{"Monarch":{"xref_id":"0008647"}}}


id: GO:0015144
data:
  {"annotated_genes":["SJAG_02958","SJAG_00057","SJAG_04068","SJAG_02719","SJAG_03608","SJAG_03960","SJAG_04905","SJAG_03606","SJAG_03820"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72624,74936,74820,74925,76535,78016],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005351"},{"annotations":[66081],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0055056"},{"annotations":[112499],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005354"},{"annotations":[104809],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015149"},{"annotations":[116038],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140108"},{"annotations":[119078],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005358"},{"annotations":[97584],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005364"},{"annotations":[77400],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008506"}]},"cv_name":"molecular_function","definition":"Enables the transfer of carbohydrate from one side of a membrane to the other.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00057":null,"SJAG_02719":null,"SJAG_02958":null,"SJAG_03606":null,"SJAG_03608":null,"SJAG_03820":null,"SJAG_03960":null,"SJAG_04068":null,"SJAG_04905":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"carbohydrate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:1901476"],"synonyms":[{"name":"carbohydrate transporter activity","type":"related"},{"name":"sugar transporter","type":"narrow"}],"termid":"GO:0015144","terms_by_termid":{"GO:0005351":null,"GO:0005354":null,"GO:0005358":null,"GO:0005364":null,"GO:0008506":null,"GO:0015149":null,"GO:0055056":null,"GO:0140108":null}}


id: GO:0035896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism increases the frequency, rate or extent of blood mast cell degranulation in another organism.","definition_xrefs":["GOC:fj","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of mast cell degranulation in another organism (obsolete GO:0035896)","synonyms":[{"name":"positive regulation of mast cell degranulation in other organism","type":"exact"},{"name":"up-regulation of mast cell degranulation in other organism","type":"related"},{"name":"upregulation of mast cell degranulation in other organism","type":"exact"}],"termid":"GO:0035896"}


id: PBO:0002688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sim4 and Mal2 associated (4 and 2 associated) protein 6","termid":"PBO:0002688"}


id: MONDO:0004592
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A contagious bacterial cutaneous infection that affects children and is usually caused by Staphylococcus aureus. It usually presents in the face with honey colored scabs.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyoderma","termid":"MONDO:0002922"},{"relation_name":"is_a","term_name":"staphylococcus aureus infection","termid":"MONDO:0005545"},{"relation_name":"is_a","term_name":"skin infection","termid":"MONDO:0021201"},{"relation_name":"is_a","term_name":"streptococcal infection","termid":"MONDO:0021680"},{"relation_name":"is_a","term_name":"skin disease caused by bacterial infection","termid":"MONDO:0024295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"impetigo","secondary_identifiers":["DOID:8504","SCTID:48277006","ICD9:684","MEDGEN:9440","UMLS:C0021099","NCIT:C99088","ICD10CM:L01","ICD10CM:L01.0","icd11.foundation:971176543","MESH:D007169"],"termid":"MONDO:0004592","xrefs":{"Monarch":{"xref_id":"0004592"}}}


id: MONDO:0001856
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"arterial disorder","termid":"MONDO:0000473"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splenic artery aneurysm","secondary_identifiers":["MEDGEN:510069","DOID:14006","UMLS:C0155747","SCTID:70405009","ICD9:442.83"],"termid":"MONDO:0001856","xrefs":{"Monarch":{"xref_id":"0001856"}}}


id: PBO:0083324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps ORF SGE1/YPR198W","termid":"PBO:0083324"}


id: PBO:0091332
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by C. albicans Ppz1","termid":"PBO:0091332"}


id: MONDO:0030453
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"genetic developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy 97","secondary_identifiers":["OMIM:619561","UMLS:C5561999","DOID:0070383","MEDGEN:1794209"],"synonyms":[{"name":"DEE97","type":"exact"}],"termid":"MONDO:0030453","xrefs":{"Monarch":{"xref_id":"0030453"}}}


id: PBO:0060738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase complex assembly factor 4 pseudogene 3","termid":"PBO:0060738"}


id: PBO:0002890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smc5-6 complex SMC subunit Smc5","termid":"PBO:0002890"}


id: MONDO:0030733
data:
  {"annotated_genes":["SJAG_02006"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88900],"is_not":false,"summary":null,"term":"MONDO:0030733"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02006":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 70","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:619828","UMLS:C5676962","DOID:0070569","MEDGEN:1809945"],"synonyms":[{"name":"SPGF70","type":"exact"},{"name":"spermatogenic failure 70","type":"exact"}],"termid":"MONDO:0030733","terms_by_termid":{"MONDO:0030733":null},"xrefs":{"Monarch":{"xref_id":"0030733"}}}


id: PATO:0002173
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An alignment quality inhering in a bearer by virtue of the bearer's being in a improper spatial positioning towards an additional entity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"misaligned with","termid":"PATO:0001654"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"misaligned towards","termid":"PATO:0002173"}


id: MONDO:0011328
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autosomal dominant limb-girdle muscular dystrophy type 1E (obsolete MONDO:0011328)","termid":"MONDO:0011328","xrefs":{"Monarch":{"xref_id":"0011328"}}}


id: MONDO:0003058
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A WHO grade I meningioma characterized by the presence of intercellular microcystic spaces that contain mucinous fluid.","definition_xrefs":["NCIT:C4721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meningioma","termid":"MONDO:0016642"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microcystic meningioma","secondary_identifiers":["DOID:4594","MEDGEN:234616","UMLS:C1384408"],"synonyms":[{"name":"microcystic meningioma","type":"exact"},{"name":"microcystic meningioma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0003058","xrefs":{"Monarch":{"xref_id":"0003058"}}}


id: PBO:0028473
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_succinate_dehydrogenase_(ubiquinone)_activity","termid":"PBO:0028473"}


id: PBO:0039420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiopoietin 4","termid":"PBO:0039420"}


id: PBO:0044672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dopa decarboxylase","termid":"PBO:0044672"}


id: PBO:0038924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor G6","termid":"PBO:0038924"}


id: PBO:0052487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 2","termid":"PBO:0052487"}


id: GO:0008988
data:
  {"annotated_genes":["SJAG_01958"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80409],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052907"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: adenosine in rRNA + S-adenosyl-L-methionine = H+ + N(6)-methyladenosine in rRNA + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:58728"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"rRNA (adenine) methyltransferase activity","termid":"GO:0016433"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01958":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016741","GO:0016740","GO:0140098","GO:0003674"],"is_obsolete":false,"name":"rRNA (adenine-N6-)-methyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"ErmC 23S rRNA methyltransferase","type":"narrow"},{"name":"S-adenosyl-L-methionine:rRNA (adenine-6-N-)-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:rRNA (adenine-N6-)-methyltransferase activity","type":"related"},{"name":"gene ksgA methyltransferase","type":"narrow"},{"name":"ribonucleic acid-adenine (N(6)) methylase activity","type":"related"},{"name":"ribonucleic acid-adenine (N6) methylase activity","type":"related"},{"name":"ribosomal ribonucleate adenine 6-methyltransferase activity","type":"related"}],"termid":"GO:0008988","terms_by_termid":{"GO:0052907":null}}


id: PBO:0041806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase recruitment domain family member 17, pseudogene","termid":"PBO:0041806"}


id: PBO:0069248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 503, pseudogene","termid":"PBO:0069248"}


id: PBO:0049877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hephaestin","termid":"PBO:0049877"}


id: PBO:0087089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L6B; binds 5.8S rRNA; homologous to mammalian ribosomal protein L6, no bacterial homolog; RPL6B has a paralog, RPL6A, that arose from the whole genome duplication","termid":"PBO:0087089"}


id: PBO:0059497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"misato family member 2, pseudogene","termid":"PBO:0059497"}


id: GO:0018084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of N-terminal peptidyl-serine to lactic acid.","definition_xrefs":["RESID:AA0186"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-lactic acid biosynthetic process from peptidyl-serine (obsolete GO:0018084)","synonyms":[{"name":"peptidyl-lactic acid anabolism from peptidyl-serine","type":"exact"},{"name":"peptidyl-lactic acid formation from peptidyl-serine","type":"exact"},{"name":"peptidyl-lactic acid synthesis from peptidyl-serine","type":"exact"}],"termid":"GO:0018084"}


id: PBO:0041955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil and C2 domain containing 2A","termid":"PBO:0041955"}


id: GO:0033875
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a ribonucleoside bisphosphate, a compound consisting of a nucleobase linked to a ribose sugar esterified with one phosphate group attached to each of two different hydroxyl groups on the sugar.","definition_xrefs":["GOC:pde","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside bisphosphate metabolic process","termid":"GO:0033865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"ribonucleoside bisphosphate metabolic process","synonyms":[{"name":"ribonucleoside bisphosphate metabolism","type":"exact"}],"termid":"GO:0033875"}


id: PBO:0061966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily AF member 1 pseudogene","termid":"PBO:0061966"}


id: MONDO:0022605
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete brachymetapody anodontia hypotrichosis albinoidism (obsolete MONDO:0022605)","termid":"MONDO:0022605","xrefs":{"Monarch":{"xref_id":"0022605"}}}


id: PBO:0052714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 6","termid":"PBO:0052714"}


id: MONDO:0010801
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spondylo-camptodactyly syndrome is characterized by camptodactyly, flattened cervical vertebral bodies and variable degrees of thoracic scoliosis.","definition_xrefs":["Orphanet:3180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spondylodysplastic dysplasia","termid":"MONDO:0019694"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spondylocamptodactyly syndrome","secondary_identifiers":["OMIM:600000","UMLS:C1838781","MEDGEN:325510","MESH:C535779","SCTID:716231009","GARD:4972"],"synonyms":[{"name":"camptodactyly with cervical platyspondyly","type":"related"},{"name":"spondylo camptodactyly syndrome","type":"related"},{"name":"spondylocamptodactyly","type":"related"}],"termid":"MONDO:0010801","xrefs":{"Monarch":{"xref_id":"0010801"}}}


id: FYPO:0007818
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of ubiquitination of one or more specific proteins, or of specific protein sites, is decreased when the cell is subject to nitrogen starvation.","definition_xrefs":["PMID:34147496","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein ubiquitination","termid":"FYPO:0007946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002274","FYPO:0002494","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein ubiquitination during nitrogen starvation","synonyms":[{"name":"decreased protein ubiquitination during nitrogen depletion","type":"exact"},{"name":"decreased protein ubiquitination during nitrogen deprivation","type":"exact"},{"name":"decreased protein ubiquitinylation during nitrogen starvation","type":"exact"},{"name":"decreased protein ubiquitylation during nitrogen starvation","type":"exact"},{"name":"reduced protein ubiquitination during nitrogen starvation","type":"exact"}],"termid":"FYPO:0007818"}


id: MONDO:0957443
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary ataxia","termid":"MONDO:0100309"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autosomal recessive ataxia due to PEX2 deficiency","secondary_identifiers":["MEDGEN:1843414","Orphanet:642965","UMLS:C5816796"],"termid":"MONDO:0957443","xrefs":{"Monarch":{"xref_id":"0957443"}}}


id: PATO:0001834
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A fertility which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"fertile","termid":"PATO:0000955"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased fertility","synonyms":[{"name":"low fertility","type":"exact"}],"termid":"PATO:0001834"}


id: PBO:0001911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF2 alpha subunit","termid":"PBO:0001911"}


id: PBO:0034481
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_level_during_cellular_response_to_hydroxyurea","termid":"PBO:0034481"}


id: MONDO:1012567
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"osseous choristoma of the ciliary body, non-human animal","termid":"MONDO:1012004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osseous choristoma of the ciliary body, domestic guinea pig","secondary_identifiers":["OMIA:002576-10141"],"termid":"MONDO:1012567","xrefs":{"Monarch":{"xref_id":"1012567"}}}


id: GO:0033056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving D-ornithine, the D-enantiomer of the amino acid ornithine, i.e. (2R)-2,5-diaminopentanoic acid.","definition_xrefs":["GOC:mah","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ornithine metabolic process","termid":"GO:0006591"},{"relation_name":"is_a","term_name":"D-amino acid metabolic process","termid":"GO:0046416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"D-ornithine metabolic process","synonyms":[{"name":"D-ornithine metabolism","type":"exact"}],"termid":"GO:0033056"}


id: PBO:0082952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic phosphorelay intermediate osmosensor and regulator; part of a two-component signal transducer that mediates osmosensing via a phosphorelay mechanism; required for mitophagy; dephosphorylated form is degraded by the ubiquitin-proteasome system; potential Cdc28p substrate","termid":"PBO:0082952"}


id: MONDO:0000431
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete mantle cell lymphoma (obsolete MONDO:0000431)","termid":"MONDO:0000431","xrefs":{"Monarch":{"xref_id":"0000431"}}}


id: GO:0042499
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the intramembrane proteolysis of a signal peptide, following its removal from a preprotein.","definition_xrefs":["PMID:12077416"],"gene_count":0,"genotype_count":0,"name":"obsolete signal peptide peptidase activity (obsolete GO:0042499)","synonyms":[{"name":"SPP","type":"exact"},{"name":"signal peptide peptidase activity","type":"exact"}],"termid":"GO:0042499"}


id: MONDO:0001150
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by an abnormal increase of cerebrospinal fluid in the ventricles of the brain.","definition_xrefs":["NCIT:C3111"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"neurodegenerative disease","termid":"MONDO:0005559"},{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrocephalus","secondary_identifiers":["SCTID:230745008","DOID:10908","icd11.foundation:574533444","MESH:D006849","ICD10CM:G91","MEDGEN:9335","UMLS:C0020255"],"synonyms":[{"name":"hydrocephalus, X-linked","type":"narrow"},{"name":"hydrocephalus, nonsyndromic, autosomal recessive","type":"narrow"}],"termid":"MONDO:0001150","xrefs":{"Monarch":{"xref_id":"0001150"}}}


id: GO:0050818
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of coagulation, the process in which a fluid solution, or part of it, changes into a solid or semisolid mass.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"coagulation","termid":"GO:0050817"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of coagulation","synonyms":[{"name":"regulation of clotting","type":"exact"}],"termid":"GO:0050818"}


id: PBO:0063268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin beta 14","termid":"PBO:0063268"}


id: PBO:0018224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med1","termid":"PBO:0018224"}


id: PBO:0113371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with structural similarity to lipid transport protein Vps13p; localizes to multiple membrane contact sites between organelles including mitochondria–ER contact sites; non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0113371"}


id: PBO:0075395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sp8 transcription factor","termid":"PBO:0075395"}


id: MONDO:0002299
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of the glomus tumor characterized by the presence of dilated veins, surrounded by small clusters of glomus cells. Glomangiomas are most often present in patients with multiple lesions.","definition_xrefs":["NCIT:C4222"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomus tumor","termid":"MONDO:0018327"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glomangioma","secondary_identifiers":["MEDGEN:87239","UMLS:C0334421","ICDO:8712/0","DOID:2436"],"synonyms":[{"name":"glomangioma","type":"exact"}],"termid":"MONDO:0002299","xrefs":{"Monarch":{"xref_id":"0002299"}}}


id: MONDO:0012111
data:
  {"annotated_genes":["SJAG_00228"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88242],"is_not":false,"summary":null,"term":"MONDO:0012111"}]},"cv_name":"mondo","definition":"Any hypertrophic cardiomyopathy in which the cause of the disease is a mutation in the MYL3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hypertrophic cardiomyopathy","termid":"MONDO:0024573"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00228":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"hypertrophic cardiomyopathy 8","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C563866","OMIM:608751","UMLS:C1837471","DOID:0110314","MEDGEN:324806"],"synonyms":[{"name":"CMH8","type":"related"},{"name":"MYL3 hypertrophic cardiomyopathy","type":"exact"},{"name":"cardiomyopathy hypertrophic mid-left ventricular chamber type 1","type":"exact"},{"name":"cardiomyopathy, familial hypertrophic, 8","type":"exact"},{"name":"cardiomyopathy, familial hypertrophic, type 8","type":"exact"},{"name":"cardiomyopathy, hypertrophic, 8","type":"exact"},{"name":"cardiomyopathy, hypertrophic, mid-left ventricular chamber type, 1","type":"related"},{"name":"hypertrophic cardiomyopathy 8","type":"exact"},{"name":"hypertrophic cardiomyopathy caused by mutation in MYL3","type":"exact"},{"name":"hypertrophic cardiomyopathy type 8","type":"exact"}],"termid":"MONDO:0012111","terms_by_termid":{"MONDO:0012111":null},"xrefs":{"Monarch":{"xref_id":"0012111"}}}


id: PBO:0086127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for high temperature survival during stationary phase; not required for growth on nonfermentable carbon sources","termid":"PBO:0086127"}


id: PBO:0041188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-transducin repeat containing E3 ubiquitin protein ligase","termid":"PBO:0041188"}


id: PBO:0074455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermine oxidase","termid":"PBO:0074455"}


id: PR:Q10256
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mud1 gene.","definition_xrefs":["UniProtKB:Q10256","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBA domain-containing protein mud1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC56F8.08","synonyms":[{"name":"DNA-damage-inducible protein DDI1 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-mud1","type":"exact"},{"name":"UBA domain-containing protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10256"}


id: GO:0070244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of thymocyte death by apoptotic process.","definition_xrefs":["ISBN:0781765196","GOC:mtg_apoptosis","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell apoptotic process","termid":"GO:0070233"},{"relation_name":"is_a","term_name":"regulation of thymocyte apoptotic process","termid":"GO:0070243"},{"relation_name":"negatively_regulates","term_name":"thymocyte apoptotic process","termid":"GO:0070242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of thymocyte apoptotic process","synonyms":[{"name":"down regulation of thymocyte apoptosis","type":"exact"},{"name":"down-regulation of thymocyte apoptosis","type":"exact"},{"name":"downregulation of thymocyte apoptosis","type":"exact"},{"name":"inhibition of thymocyte apoptosis","type":"narrow"},{"name":"negative regulation of immature T cell apoptosis","type":"related"},{"name":"negative regulation of thymocyte apoptosis","type":"narrow"}],"termid":"GO:0070244"}


id: GO:0101031
data:
  {"annotated_genes":["SJAG_04121","SJAG_02926","SJAG_00609","SJAG_00447","SJAG_02378","SJAG_01002","SJAG_03570","SJAG_03320"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[78537,81541,71553,79896,77915,75350,79804,74405],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005832"}]},"cv_name":"cellular_component","definition":"A protein complex required for the non-covalent folding or unfolding, maturation, stabilization or assembly or disassembly of macromolecular structures. Usually active during or immediately after completion of translation. Many chaperone complexes contain heat shock proteins.","definition_xrefs":["GOC:bhm","PMID:21855797"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00447":null,"SJAG_00609":null,"SJAG_01002":null,"SJAG_02378":null,"SJAG_02926":null,"SJAG_03320":null,"SJAG_03570":null,"SJAG_04121":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"protein folding chaperone complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"chaperone complex","type":"broad"}],"termid":"GO:0101031","terms_by_termid":{"GO:0005832":null}}


id: PBO:0084801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein of unknown function; almost completely overlaps ORF HVG1/YER039C","termid":"PBO:0084801"}


id: GO:0034520
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-naphthaldehyde + NAD+ + H2O = 2-naphthoate + NADH + H+.","definition_xrefs":["UM-BBD_reactionID:r0772"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-naphthaldehyde dehydrogenase activity (obsolete GO:0034520)","termid":"GO:0034520"}


id: MONDO:1011155
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Marfan syndrome that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Marfan syndrome, non-human animal","termid":"MONDO:1010296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Marfan syndrome, pig","secondary_identifiers":["OMIA:000628-9823"],"termid":"MONDO:1011155","xrefs":{"Monarch":{"xref_id":"1011155"}}}


id: GO:0106216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of vesicle fusion with Golgi apparatus.","definition_xrefs":["PMID:26195667","GOC:se"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of vesicle fusion","termid":"GO:0031340"},{"relation_name":"is_a","term_name":"regulation of vesicle fusion with Golgi apparatus","termid":"GO:0106214"},{"relation_name":"positively_regulates","term_name":"vesicle fusion with Golgi apparatus","termid":"GO:0048280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0061024","GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of vesicle fusion with Golgi apparatus","termid":"GO:0106216"}


id: MONDO:0015080
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete thymic tumor (obsolete MONDO:0015080)","termid":"MONDO:0015080","xrefs":{"Monarch":{"xref_id":"0015080"}}}


id: PBO:0076656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBX18 antisense RNA 1","termid":"PBO:0076656"}


id: PBO:0091373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chalcone-related heme binding protein, Aim18","termid":"PBO:0091373"}


id: PBO:0111792
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA family ATPase","termid":"PBO:0111792"}


id: PBO:0062362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily V member 1","termid":"PBO:0062362"}


id: PBO:0035732
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_centromeric_chromatin_during_mitotic_G1_phase","termid":"PBO:0035732"}


id: PBO:0060219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAX dimerization protein 1","termid":"PBO:0060219"}


id: PBO:0050946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon alpha 20, pseudogene","termid":"PBO:0050946"}


id: GO:0071526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of a semaphorin receptor (composed of a plexin and a neurophilin) binding to a semaphorin ligand.","definition_xrefs":["GOC:BHF","GOC:vk","GOC:mah","PMID:15239959"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"semaphorin-plexin signaling pathway","synonyms":[{"name":"semaphorin-plexin signalling pathway","type":"exact"}],"termid":"GO:0071526"}


id: PBO:0086339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pseudogenic fragment with similarity to flocculins; YAR064W has a paralog, YHR213W-B, that arose from a segmental duplication","termid":"PBO:0086339"}


id: GO:0072034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Signaling at short range between cells of the ureteric bud terminus and the kidney mesenchyme that positively regulates the formation of the renal vesicle.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental induction","termid":"GO:0031128"},{"relation_name":"is_a","term_name":"positive regulation of kidney development","termid":"GO:0090184"},{"relation_name":"is_a","term_name":"positive regulation of animal organ morphogenesis","termid":"GO:0110110"},{"relation_name":"is_a","term_name":"positive regulation of morphogenesis of an epithelium","termid":"GO:1905332"},{"relation_name":"positively_regulates","term_name":"renal vesicle formation","termid":"GO:0072033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal vesicle induction","synonyms":[{"name":"nephron induction","type":"exact"},{"name":"positive regulation of nephron formation","type":"exact"}],"termid":"GO:0072034"}


id: FYPO:0004323
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at positions 5, 8, 12 and 16 of histone H4 at the centromere central core occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah","PMID:18493607"],"gene_count":0,"genotype_count":0,"name":"obsolete increased histone H4-K5, H4-K8, H4-K12 and H4-K16 acetylation at centromere central core during vegetative growth (obsolete FYPO:0004323)","synonyms":[{"name":"increased histone H4 acetylation (K5, K8, K12 and K16) at centromere central core during vegetative growth","type":"exact"},{"name":"increased histone H4-K5, H4-K8, H4-K12 and H4-K16 acetylation at centromere central core during mitotic cell cycle","type":"related"},{"name":"increased histone H4-K5/8/12/16 acetylation at centromere central core during vegetative growth","type":"exact"},{"name":"increased histone H4K5, H4K8, H4K12 and H4K16 acetylation at centromere central core during vegetative growth","type":"exact"}],"termid":"FYPO:0004323"}


id: PBO:0087032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L15B; binds to 5.8 S rRNA; homologous to mammalian ribosomal protein L15, no bacterial homolog; RPL15B has a paralog, RPL15A, that arose from the whole genome duplication; relocalizes from nucleus to nucleolus upon DNA replication stress","termid":"PBO:0087032"}


id: MONDO:0017521
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hyperphalangy","termid":"MONDO:0017455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"hyperphalangy, unilateral","secondary_identifiers":["Orphanet:295140","icd11.foundation:1023621052"],"synonyms":[{"name":"hyperphalangy in digits 2-5","type":"exact"},{"name":"supernumerary phalanges, unilateral","type":"exact"},{"name":"supernumerary phalanx, unilateral","type":"exact"}],"termid":"MONDO:0017521","xrefs":{"Monarch":{"xref_id":"0017521"}}}


id: GO:1905335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of aggrephagy.","definition_xrefs":["GO_REF:0000058","PMID:25686248","GOC:PARL","GOC:pad","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macroautophagy","termid":"GO:0016241"},{"relation_name":"regulates","term_name":"aggrephagy","termid":"GO:0035973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0006914","GO:0008150"],"is_obsolete":false,"name":"regulation of aggrephagy","termid":"GO:1905335"}


id: PBO:0056778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase like 27","termid":"PBO:0056778"}


id: MONDO:0032580
data:
  {"annotated_genes":["SJAG_00471"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88175],"is_not":false,"summary":null,"term":"MONDO:0032580"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial nephrotic syndrome","termid":"MONDO:0002350"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00471":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"nephrotic syndrome, type 17","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4748545","GARD:16299","DOID:0080392","OMIM:618176","MEDGEN:1648294"],"synonyms":[{"name":"NEPHROTIC SYNDROME, TYPE 17","type":"related"},{"name":"NPHS17","type":"related"}],"termid":"MONDO:0032580","terms_by_termid":{"MONDO:0032580":null},"xrefs":{"Monarch":{"xref_id":"0032580"}}}


id: PATO:0000462
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality denoting the lack of an entity.","definition_xrefs":["thefreedictionary.:thefreedictionary."],"direct_ancestors":[{"relation_name":"is_a","term_name":"amount","termid":"PATO:0000070"},{"relation_name":"reciprocal_of","term_name":"lacking processual parts","termid":"PATO:0001558"},{"relation_name":"reciprocal_of","term_name":"lacks all parts of type","termid":"PATO:0002000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"absent","secondary_identifiers":["PATO:0001996"],"synonyms":[{"name":"absence","type":"exact"},{"name":"absent from organism","type":"exact"}],"termid":"PATO:0000462"}


id: MONDO:0015641
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Benign infantile focal epilepsy with midline spikes and waves during sleep is a rare infantile epilepsy syndrome characterized by age of onset between 4 and 30 months, partial sporadic seizures presenting with motion arrest, staring, cyanosis and, less common, automatisms and lateralizing signs, and characteristic interictal sleep EEG changes consisting of a spike followed by a bell-shaped slow wave in the midline region.","definition_xrefs":["Orphanet:166308"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign partial infantile seizures","termid":"MONDO:0015642"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"benign infantile focal epilepsy with midline spikes and wave during sleep","secondary_identifiers":["GARD:20075","MEDGEN:1663004","UMLS:C4749346"],"synonyms":[{"name":"BIMSE","type":"exact"},{"name":"benign infantile focal epilepsy with midline spikes and waves during sleep","type":"related"}],"termid":"MONDO:0015641","xrefs":{"Monarch":{"xref_id":"0015641"}}}


id: MONDO:0021017
data:
  {"annotated_genes":["SJAG_03056","SJAG_04728","SJAG_01872","SJAG_00826","SJAG_04821","SJAG_00924"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87759],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012518"},{"annotations":[87956],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013883"},{"annotations":[87194],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014543"},{"annotations":[87191],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014542"},{"annotations":[87034],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014590"},{"annotations":[87823],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012157"},{"annotations":[88065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032596"}]},"cv_name":"mondo","definition":"A disease caused by dysfunction of synapses.","definition_xrefs":["Wikipedia:Synaptopathy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00826":null,"SJAG_00924":null,"SJAG_01872":null,"SJAG_03056":null,"SJAG_04728":null,"SJAG_04821":null},"genotype_count":0,"is_obsolete":false,"name":"synaptopathy","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0021017","terms_by_termid":{"MONDO:0012157":null,"MONDO:0012518":null,"MONDO:0013883":null,"MONDO:0014542":null,"MONDO:0014543":null,"MONDO:0014590":null,"MONDO:0032596":null},"xrefs":{"Monarch":{"xref_id":"0021017"}}}


id: FYPO:0008023
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which a cell population does not grow in a medium containing leucine as the nitrogen source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished vegetative cell population growth","termid":"FYPO:0001575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0005447","FYPO:0002060","FYPO:0000003","FYPO:0000139","FYPO:0001985","FYPO:0002058"],"is_obsolete":false,"name":"abolished cell population growth on leucine nitrogen source","synonyms":[{"name":"abolished growth on leucine nitrogen source","type":"broad"},{"name":"abolished leucine utilization","type":"related"},{"name":"abolished vegetative cell population growth on leucine nitrogen source","type":"exact"},{"name":"cell population growth on leucine nitrogen source abolished","type":"exact"}],"termid":"FYPO:0008023"}


id: PR:Q9UT63
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC513.02 gene.","definition_xrefs":["UniProtKB:Q9UT63","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatase SPAC513.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC513.02","synonyms":[{"name":"Spom972h-SPAC513.02","type":"exact"}],"termid":"PR:Q9UT63"}


id: PBO:0051361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 3-11","termid":"PBO:0051361"}


id: PBO:0062619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily Y member 1 pseudogene","termid":"PBO:0062619"}


id: PBO:0038992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylosuccinate synthase 1","termid":"PBO:0038992"}


id: PBO:0005184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asteroid homolog, XP-G family protein","termid":"PBO:0005184"}


id: MONDO:0003124
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sex cord-stromal tumor that arises from the testis and is characterized by the presence of cells that resemble the successive stages of development of Leydig cells. It usually presents as a painless testicular mass. Gynecomastia is present in approximately thirty percent of the cases. Libido may be decreased. In children, precocious puberty may be present. A minority of cases exhibit malignant characteristics.","definition_xrefs":["NCIT:C6356"],"direct_ancestors":[{"relation_name":"is_a","term_name":"testicular sex cord-stromal neoplasm","termid":"MONDO:0003125"},{"relation_name":"is_a","term_name":"Leydig cell tumor","termid":"MONDO:0006266"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testicular Leydig cell tumor","secondary_identifiers":["MEDGEN:163584","SCTID:67871000119105","DOID:4756","UMLS:C0863027"],"synonyms":[{"name":"Leydig cell neoplasm of testis","type":"exact"},{"name":"Leydig cell neoplasm of the testis","type":"exact"},{"name":"Leydig cell tumor of testis","type":"exact"},{"name":"Leydig cell tumor of the testis","type":"related"},{"name":"Leydig cell tumour of testis","type":"exact"},{"name":"Leydig cell tumour of the testis","type":"related"},{"name":"testicular Leydig cell neoplasm","type":"exact"},{"name":"testicular Leydig cell tumor","type":"exact"},{"name":"testis Leydig cell tumor","type":"exact"},{"name":"testis Leydig cell tumour","type":"exact"}],"termid":"MONDO:0003124","xrefs":{"Monarch":{"xref_id":"0003124"}}}


id: PBO:0070378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"roundabout guidance receptor 4","termid":"PBO:0070378"}


id: PBO:0028302
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_phosphorylation_during_mitosis","termid":"PBO:0028302"}


id: PBO:0041339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 3 open reading frame 33","termid":"PBO:0041339"}


id: MONDO:0975810
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short stature with nonspecific skeletal abnormalities","secondary_identifiers":["MEDGEN:906874","OMIMPS:616255","UMLS:C4225399"],"termid":"MONDO:0975810","xrefs":{"Monarch":{"xref_id":"0975810"}}}


id: PBO:0054794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2208","termid":"PBO:0054794"}


id: RO:0002215
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relation between a material entity (such as a cell) and a process, in which the material entity has the ability to carry out the process. ","direct_ancestors":[{"relation_name":"is_a","term_name":"capable_of_part_of","termid":"RO:0002216"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capable_of","termid":"RO:0002215"}


id: GO:0097438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The dormancy process that results in exit from dormancy. Dormancy (sometimes called a dormant state) is a suspension of most physiological activity and growth that can be reactivated.","definition_xrefs":["GOC:PO_curators","PO_REF:00009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dormancy process","termid":"GO:0022611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"exit from dormancy","synonyms":[{"name":"release from dormancy","type":"exact"}],"termid":"GO:0097438"}


id: GO:0000032
data:
  {"annotated_genes":["SJAG_04770","SJAG_04906","SJAG_02519","SJAG_01276","SJAG_03082","SJAG_00598","SJAG_01264","SJAG_00816","SJAG_01021"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73750,76425,76554,78718,79267,79756,81082,82178,89311],"is_not":false,"summary":null,"term":"GO:0000032"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cell wall mannoproteins, any cell wall protein that contains covalently bound mannose residues.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall glycoprotein biosynthetic process","termid":"GO:0031506"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00598":null,"SJAG_00816":null,"SJAG_01021":null,"SJAG_01264":null,"SJAG_01276":null,"SJAG_02519":null,"SJAG_03082":null,"SJAG_04770":null,"SJAG_04906":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0071554"],"is_obsolete":false,"name":"cell wall mannoprotein biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cell wall mannoprotein anabolism","type":"exact"},{"name":"cell wall mannoprotein biosynthesis","type":"exact"},{"name":"cell wall mannoprotein formation","type":"exact"},{"name":"cell wall mannoprotein synthesis","type":"exact"}],"termid":"GO:0000032","terms_by_termid":{"GO:0000032":null}}


id: PBO:0091047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L12","termid":"PBO:0091047"}


id: GO:0033754
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: tryptophan + O2 = N-formylkynurenine. The product of the reaction depends on the substrate; D-tryptophan produces N-formyl-D-kynurenine, and L-tryptophan produces N-formyl-L-kynurenine.","definition_xrefs":["EC:1.13.11.52"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"indoleamine 2,3-dioxygenase activity","synonyms":[{"name":"D-tryptophan:oxygen 2,3-oxidoreductase (decyclizing) activity","type":"narrow"},{"name":"IDO","type":"related"},{"name":"tryptophan pyrrolase activity","type":"broad"}],"termid":"GO:0033754"}


id: MONDO:0020794
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, invasive colorectal adenocarcinoma characterized by the presence of sheets of malignant epithelial cells with vesicular nuclei, prominent nucleoli, and abundant eosinophilic cytoplasm. It usually has a favorable prognosis.","definition_xrefs":["NCIT:C43590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colorectal adenocarcinoma","termid":"MONDO:0005008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"colorectal medullary carcinoma","secondary_identifiers":["UMLS:C1707438","MEDGEN:317525"],"synonyms":[{"name":"colorectal medullary carcinoma","type":"exact"}],"termid":"MONDO:0020794","xrefs":{"Monarch":{"xref_id":"0020794"}}}


id: MONDO:0003766
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cancer involving a dorsal plus ventral thalamus.","definition_xrefs":["MONDO:patterns/cancer"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diencephalic cancer","termid":"MONDO:0002786"},{"relation_name":"is_a","term_name":"thalamic disorder","termid":"MONDO:0003081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"thalamic cancer","secondary_identifiers":["DOID:6098","MEDGEN:83429","NCIT:C4576","SCTID:188287005","UMLS:C0346902","icd11.foundation:610018988"],"synonyms":[{"name":"cancer of dorsal plus ventral thalamus","type":"exact"},{"name":"dorsal plus ventral thalamus cancer","type":"exact"},{"name":"malignant dorsal plus ventral thalamus neoplasm","type":"exact"},{"name":"malignant neoplasm of dorsal plus ventral thalamus","type":"exact"},{"name":"malignant neoplasm of thalamus","type":"exact"},{"name":"malignant neoplasm of the thalamus","type":"exact"},{"name":"malignant thalamic neoplasm","type":"exact"},{"name":"malignant thalamic neoplasms","type":"exact"},{"name":"malignant thalamic tumor","type":"exact"},{"name":"malignant thalamic tumors","type":"exact"},{"name":"malignant thalamic tumour","type":"exact"},{"name":"malignant thalamic tumours","type":"exact"},{"name":"malignant thalamus neoplasm","type":"exact"},{"name":"malignant thalamus neoplasms","type":"exact"},{"name":"malignant thalamus tumor","type":"exact"},{"name":"malignant thalamus tumors","type":"exact"},{"name":"malignant thalamus tumour","type":"exact"},{"name":"malignant thalamus tumours","type":"exact"},{"name":"malignant tumor of thalamus","type":"exact"},{"name":"malignant tumor of the thalamus","type":"exact"},{"name":"malignant tumour of thalamus","type":"exact"},{"name":"malignant tumour of the thalamus","type":"exact"},{"name":"thalamic neoplasm","type":"related"},{"name":"tumor of thalamus","type":"exact"},{"name":"tumour of thalamus","type":"exact"}],"termid":"MONDO:0003766","xrefs":{"Monarch":{"xref_id":"0003766"}}}


id: PBO:0054783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2196","termid":"PBO:0054783"}


id: PBO:0039336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha kinase 3","termid":"PBO:0039336"}


id: PBO:0049327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIE subunit 1","termid":"PBO:0049327"}


id: PBO:0061817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OFD1 pseudogene 7 Y-linked","termid":"PBO:0061817"}


id: GO:0070233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of T cell death by apoptotic process.","definition_xrefs":["GOC:add","GOC:mtg_apoptosis","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lymphocyte apoptotic process","termid":"GO:0070229"},{"relation_name":"is_a","term_name":"regulation of T cell apoptotic process","termid":"GO:0070232"},{"relation_name":"negatively_regulates","term_name":"T cell apoptotic process","termid":"GO:0070231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of T cell apoptotic process","synonyms":[{"name":"down regulation of T cell apoptosis","type":"exact"},{"name":"down-regulation of T cell apoptosis","type":"exact"},{"name":"downregulation of T cell apoptosis","type":"exact"},{"name":"inhibition of T cell apoptosis","type":"narrow"},{"name":"negative regulation of T cell apoptosis","type":"narrow"},{"name":"negative regulation of T lymphocyte apoptosis","type":"exact"},{"name":"negative regulation of T-cell apoptosis","type":"exact"},{"name":"negative regulation of T-lymphocyte apoptosis","type":"exact"},{"name":"negative regulation of programmed cell death of T cells by apoptosis","type":"exact"}],"termid":"GO:0070233"}


id: MONDO:1012886
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Parkinson disease that occurs in white-tufted-ear marmosets due to a mutation in the LRRK2 gene created by genetic engineering or gene editing.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Parkinson disease, non-human animal","termid":"MONDO:1012984"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Parkinson disease, LRRK2-related, white-tufted-ear marmoset","secondary_identifiers":["OMIA:002379-9483"],"termid":"MONDO:1012886","xrefs":{"Monarch":{"xref_id":"1012886"}}}


id: MONDO:0035787
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete non-syndromic anorectal malformation without fistula (obsolete MONDO:0035787)","secondary_identifiers":["Orphanet:601002"],"termid":"MONDO:0035787","xrefs":{"Monarch":{"xref_id":"0035787"}}}


id: GO:0050271
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: an S-alkyl-L-cysteine + H2O = an alkyl thiol + NH3 + pyruvate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete S-alkylcysteine lyase activity (obsolete GO:0050271)","termid":"GO:0050271"}


id: PR:Q09923
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An uncharacterized oxidoreductase YdjG that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01759"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase yakc [NADP(+)] (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F7.12","secondary_identifiers":["UniProtKB:Q09923"],"synonyms":[{"name":"Spom972h-ydjG","type":"exact"}],"termid":"PR:Q09923"}


id: MONDO:0056803
data:
  {"annotated_genes":["SJAG_01199","SJAG_01070","SJAG_02306","SJAG_04459","SJAG_03659","SJAG_03671","SJAG_04042","SJAG_00582","SJAG_01063","SJAG_04016","SJAG_01417","SJAG_03701","SJAG_03069","SJAG_03556","SJAG_02007","SJAG_02895","SJAG_03712","SJAG_01612","SJAG_03641","SJAG_00988","SJAG_01162","SJAG_03553","SJAG_03290","SJAG_01164","SJAG_01995","SJAG_03316","SJAG_01216","SJAG_01147","SJAG_01466","SJAG_01351","SJAG_04425","SJAG_03222","SJAG_02397"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87444],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009825"},{"annotations":[87416],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100255"},{"annotations":[87110],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009352"},{"annotations":[86806],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009058"},{"annotations":[88824],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015003"},{"annotations":[88016,88015],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009285"},{"annotations":[87691],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009259"},{"annotations":[87564],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009947"},{"annotations":[88000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009284"},{"annotations":[88662],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0019531"},{"annotations":[88067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009666"},{"annotations":[87054,87055],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009353"},{"annotations":[88715],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013404"},{"annotations":[88439],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013762"},{"annotations":[87226],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014576"},{"annotations":[87755],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009607"},{"annotations":[87032,87031],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009354"},{"annotations":[87642],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009609"},{"annotations":[88473],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010184"},{"annotations":[86927],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011582"},{"annotations":[88648],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0975806"},{"annotations":[87454],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013675"},{"annotations":[87810],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014132"},{"annotations":[87075],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014611"},{"annotations":[87141],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033282"},{"annotations":[87783],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054785"},{"annotations":[88134],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957382"},{"annotations":[88803],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0971174"},{"annotations":[86994],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009529"},{"annotations":[87583],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014803"},{"annotations":[86934],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009593"}]},"cv_name":"mondo","definition":"A disease that has its basis in the disruption of sulfur compound metabolic process.","definition_xrefs":["MONDO:patterns/disrupts_process"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mineral metabolism disease","termid":"MONDO:0000226"}],"gene_count":33,"genes_by_uniquename":{"SJAG_00582":null,"SJAG_00988":null,"SJAG_01063":null,"SJAG_01070":null,"SJAG_01147":null,"SJAG_01162":null,"SJAG_01164":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_01351":null,"SJAG_01417":null,"SJAG_01466":null,"SJAG_01612":null,"SJAG_01995":null,"SJAG_02007":null,"SJAG_02306":null,"SJAG_02397":null,"SJAG_02895":null,"SJAG_03069":null,"SJAG_03222":null,"SJAG_03290":null,"SJAG_03316":null,"SJAG_03553":null,"SJAG_03556":null,"SJAG_03641":null,"SJAG_03659":null,"SJAG_03671":null,"SJAG_03701":null,"SJAG_03712":null,"SJAG_04016":null,"SJAG_04042":null,"SJAG_04425":null,"SJAG_04459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"sulfur metabolism disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:688004","SCTID:123809005","UMLS:C1263724"],"synonyms":[{"name":"disorder of sulfur compound metabolic process","type":"exact"},{"name":"disorder of sulfur metabolic process","type":"exact"},{"name":"disorder of sulfur metabolism","type":"exact"},{"name":"disorder of sulphur compound metabolic process","type":"exact"},{"name":"disorder of sulphur metabolic process","type":"exact"},{"name":"disorder of sulphur metabolism","type":"exact"},{"name":"sulfur compound metabolic process disease","type":"exact"},{"name":"sulphur compound metabolic process disease","type":"exact"}],"termid":"MONDO:0056803","terms_by_termid":{"MONDO:0009058":null,"MONDO:0009259":null,"MONDO:0009284":null,"MONDO:0009285":null,"MONDO:0009352":null,"MONDO:0009353":null,"MONDO:0009354":null,"MONDO:0009529":null,"MONDO:0009593":null,"MONDO:0009607":null,"MONDO:0009609":null,"MONDO:0009666":null,"MONDO:0009825":null,"MONDO:0009947":null,"MONDO:0010184":null,"MONDO:0011582":null,"MONDO:0013404":null,"MONDO:0013675":null,"MONDO:0013762":null,"MONDO:0014132":null,"MONDO:0014576":null,"MONDO:0014611":null,"MONDO:0014803":null,"MONDO:0015003":null,"MONDO:0019531":null,"MONDO:0033282":null,"MONDO:0054785":null,"MONDO:0100255":null,"MONDO:0957382":null,"MONDO:0971174":null,"MONDO:0975806":null},"xrefs":{"Monarch":{"xref_id":"0056803"}}}


id: GO:0036510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of an alpha-1,2-linked mannose from the C-chain of a glycoprotein oligosaccharide in the endoplasmic reticulum.","definition_xrefs":["GOC:PARL","GOC:bf","PMID:20065073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum mannose trimming","termid":"GO:1904380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trimming of terminal mannose on C branch","synonyms":[{"name":"conversion of (Man)9(GlcNAc)2 to (Man)8C(GlcNAc)2","type":"related"},{"name":"conversion of M9 to M8C","type":"related"},{"name":"glycoprotein mannose trimming on C branch","type":"exact"}],"termid":"GO:0036510"}


id: GO:0044581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions a resulting in the resulting in the breakdown of butyryl-CoA to form butyrate.","definition_xrefs":["GOC:tt","PMID:19539744","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"butyryl-CoA catabolic process","termid":"GO:0044580"},{"relation_name":"is_a","term_name":"butyrate biosynthetic process","termid":"GO:0046358"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0006790","GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"butyryl-CoA catabolic process to butyrate","synonyms":[{"name":"butyryl-CoA catabolism to butyrate","type":"exact"}],"termid":"GO:0044581"}


id: PBO:0067440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 561, pseudogene","termid":"PBO:0067440"}


id: FYPO:0004067
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of the serine residue at position 2 within one or more copies of the heptapeptide repeat (YSPTSPS) of the C-terminal domain of RNA polymerase II occurs to a lower extent than normal.","definition_xrefs":["GO:0071619","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during vegetative growth","termid":"FYPO:0001838"},{"relation_name":"is_a","term_name":"abnormal RNA polymerase II C-terminal domain phosphorylation","termid":"FYPO:0007410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0002274","FYPO:0005447","FYPO:0001320","FYPO:0002494"],"is_obsolete":false,"name":"decreased phosphorylation of RNA polymerase II C-terminal domain serine 2 residues during vegetative growth","synonyms":[{"name":"decreased phosphorylation of RNA polymerase II C-terminal domain serine 2 residues during mitotic cell cycle","type":"related"},{"name":"decreased phosphorylation of RNA polymerase II CTD serine 2 residues during vegetative growth","type":"exact"},{"name":"reduced phosphorylation of RNA polymerase II C-terminal domain serine 2 residues during vegetative growth","type":"exact"}],"termid":"FYPO:0004067"}


id: PBO:0044535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol lipase beta","termid":"PBO:0044535"}


id: FYECO:0000299
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which queuosine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ queuosine","termid":"FYECO:0000299"}


id: PBO:0044082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 45 member A1","termid":"PBO:0044082"}


id: PBO:0074679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 63","termid":"PBO:0074679"}


id: PBO:0086260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that regulates peroxisome populations; peroxisomal integral membrane protein; interacts with Pex11p, Pex25p, and Pex27p to control both constitutive peroxisome division and peroxisome morphology and abundance during peroxisome proliferation","termid":"PBO:0086260"}


id: PBO:0035721
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_shmoo_directionality","termid":"PBO:0035721"}


id: PBO:0045444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydropyrimidine dehydrogenase","termid":"PBO:0045444"}


id: PBO:0050464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HORMA domain containing 1","termid":"PBO:0050464"}


id: PBO:0072855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretion associated Ras related GTPase 1B","termid":"PBO:0072855"}


id: PBO:0069726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1007, pseudogene","termid":"PBO:0069726"}


id: PBO:0005674
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.7.3.3","termid":"PBO:0005674"}


id: MONDO:0017295
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Juvenile glycerol kinase deficiency (GKD) is an uncommon form of GKD characterized by Reye-like clinical manifestations including episodic vomiting, acidemia, and disorders of consciousness.","definition_xrefs":["Orphanet:284411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isolated glycerol kinase deficiency","termid":"MONDO:0018459"},{"relation_name":"is_a","term_name":"disorder of gluconeogenesis","termid":"MONDO:0019225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"glycerol kinase deficiency, juvenile form","secondary_identifiers":["GARD:17316","MEDGEN:1842281","UMLS:C5681029"],"termid":"MONDO:0017295","xrefs":{"Monarch":{"xref_id":"0017295"}}}


id: PBO:0066673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras like without CAAX 2","termid":"PBO:0066673"}


id: GO:0010557
data:
  {"annotated_genes":["SJAG_02981","SJAG_02730","SJAG_01243","SJAG_01307","SJAG_03289","SJAG_00996","SJAG_03366","SJAG_02043","SJAG_01403","SJAG_01441","SJAG_01952","SJAG_00987","SJAG_02472","SJAG_03696","SJAG_02389","SJAG_02170","SJAG_06576","SJAG_00266","SJAG_03599","SJAG_02494","SJAG_01916","SJAG_02303","SJAG_02447","SJAG_05313","SJAG_04213","SJAG_05265","SJAG_02252","SJAG_00269","SJAG_04855","SJAG_03061","SJAG_03668","SJAG_02812","SJAG_05192","SJAG_04194","SJAG_04596","SJAG_04611","SJAG_02500","SJAG_03735","SJAG_02551","SJAG_03981","SJAG_01804","SJAG_01110","SJAG_00163","SJAG_03501","SJAG_04038","SJAG_04712","SJAG_01622","SJAG_03550","SJAG_04749","SJAG_02466","SJAG_03441","SJAG_03622","SJAG_02768","SJAG_04613","SJAG_01213","SJAG_01878","SJAG_00822","SJAG_02189","SJAG_03033","SJAG_00769","SJAG_00743","SJAG_01658","SJAG_01938","SJAG_00045","SJAG_02066","SJAG_02474","SJAG_03279","SJAG_01040","SJAG_04820","SJAG_00087","SJAG_04099","SJAG_02608","SJAG_01230","SJAG_02406","SJAG_04369","SJAG_00896","SJAG_01711","SJAG_02048","SJAG_04666","SJAG_02773","SJAG_02329","SJAG_00973","SJAG_02458","SJAG_01436","SJAG_03484","SJAG_02255","SJAG_01583","SJAG_04206","SJAG_00210","SJAG_03538","SJAG_03776","SJAG_04839","SJAG_05343","SJAG_04421","SJAG_01919","SJAG_01694","SJAG_03145","SJAG_05020","SJAG_00342","SJAG_01611","SJAG_01151","SJAG_00150","SJAG_00909","SJAG_02709","SJAG_04097","SJAG_03118","SJAG_04274","SJAG_03590","SJAG_04705","SJAG_03519","SJAG_04989","SJAG_02218","SJAG_03787","SJAG_01740","SJAG_04388","SJAG_00873","SJAG_02058","SJAG_02549","SJAG_04825","SJAG_02810","SJAG_02326","SJAG_00156","SJAG_02589","SJAG_04771","SJAG_00584","SJAG_05247","SJAG_05187","SJAG_01513","SJAG_04551","SJAG_00797","SJAG_00184","SJAG_00904","SJAG_04647","SJAG_00739","SJAG_03346","SJAG_02869","SJAG_04092","SJAG_05288","SJAG_00698","SJAG_02927","SJAG_03967","SJAG_02956","SJAG_00613","SJAG_01150","SJAG_03576","SJAG_03883","SJAG_03879","SJAG_01517","SJAG_04946","SJAG_00746","SJAG_02938","SJAG_03573","SJAG_00766","SJAG_01764","SJAG_04191","SJAG_04009","SJAG_03758","SJAG_02571","SJAG_03255","SJAG_00349","SJAG_01532","SJAG_00440","SJAG_02018","SJAG_01149","SJAG_01771","SJAG_00693","SJAG_05203","SJAG_04576","SJAG_00641","SJAG_02385","SJAG_02314","SJAG_01465","SJAG_01325","SJAG_00164","SJAG_04435","SJAG_04249","SJAG_04758","SJAG_02573","SJAG_01113","SJAG_05153","SJAG_01199","SJAG_03897","SJAG_02311","SJAG_06638","SJAG_01193","SJAG_02849","SJAG_02057","SJAG_02698","SJAG_05341","SJAG_01249","SJAG_03126","SJAG_02415","SJAG_03183","SJAG_07011","SJAG_02254","SJAG_03579","SJAG_01016","SJAG_03283","SJAG_03421","SJAG_02798","SJAG_03839","SJAG_00792","SJAG_00868","SJAG_00802","SJAG_04755","SJAG_03884","SJAG_03143","SJAG_02846","SJAG_03067","SJAG_01047","SJAG_00441","SJAG_02370","SJAG_01805","SJAG_03241","SJAG_02671","SJAG_03694","SJAG_04005","SJAG_04813","SJAG_01653","SJAG_01778","SJAG_03944","SJAG_01475","SJAG_02906","SJAG_02138","SJAG_00297","SJAG_00581","SJAG_02592","SJAG_00735","SJAG_03431","SJAG_04036","SJAG_02196","SJAG_02391","SJAG_02872","SJAG_03752","SJAG_02723","SJAG_01062","SJAG_06599","SJAG_04205","SJAG_01111","SJAG_02541"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92005,80501,101917,80461],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070935"},{"annotations":[91302,72370],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048255"},{"annotations":[91603],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120271"},{"annotations":[93489],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060212"},{"annotations":[79086,108487],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061188"},{"annotations":[110330],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060906"},{"annotations":[118996,71520,108489],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000767"},{"annotations":[72000,81561],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032786"},{"annotations":[91337],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010628"},{"annotations":[100520,114532],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070131"},{"annotations":[102281],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070134"},{"annotations":[91291,120293],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905746"},{"annotations":[75764,112779,93974,77066],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048026"},{"annotations":[89326,94234],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140748"},{"annotations":[108493,91278,95305,89774],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060963"},{"annotations":[81314,91526],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045899"},{"annotations":[113819],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904595"},{"annotations":[74917,80287,78089,79779,81224],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045943"},{"annotations":[67628,81704,102308,79788,96187,113733,70854,81403,75617,62015,75108,81333,100391,120980,62917,60736,73424,77371,78495,119238,120102,110888,78126,109813,99335,111537,66488,72519,74633,76788,113605,114152,74228,63013,102319,116691,97346,65037,79146,79188,77551,73265,75127,68626,76557,89224,110302,103967,118853,99338,75540,77661,94565,99339,99105,99337,101317,106266,70336,118329,104047,101109,74002,71113,104520,110475,72510,80344,100231,120979,72003,109252,63786,80868,98740,73619,99336,70132,72082,104094,95622,97506,104991,64143,69063,95524,81564,109412,110650,118139,96898],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045944"},{"annotations":[81297,73241,118862,79938,65744,72831],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032968"},{"annotations":[96149,92492,108067,105494,116592,96264,110592,103776,65407,110565,108204,107523,89261,100840,105235,92181,97198,97680,100489,107878,120814],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060261"},{"annotations":[67841,70301],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045901"},{"annotations":[74472],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045948"},{"annotations":[70302,78279,67842],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045905"},{"annotations":[109281,100316,112461,116578,93225,100050,90688,96118,118208,113607,94110,95324,96456,108737,104943,91880,66117,95993,119316,100482,118768,67672,97710,98900,107452,97266,116096,106394,90157,91613,95593,89796,117569,97291,90308,100956,105188,102798,117248,119137,97703,119829,98466,114988,92508,115177,98268,99635,116261,92522,119480,103383,117116,95965,116170,111425,89474,114410,119409,110910,116085,116872,118400,59099,119431,61575,64517,67725,106858,109166,111194,111317,115008,110303,95822,108585,101206,117262,105668,91098,94607,95932,107599,95946,89973,109518,89618,109718,112325,114834],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045815"}]},"cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of the chemical reactions and pathways resulting in the formation of a macromolecule, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"regulation of macromolecule biosynthetic process","termid":"GO:0010556"},{"relation_name":"is_a","term_name":"positive regulation of macromolecule metabolic process","termid":"GO:0010604"},{"relation_name":"positively_regulates","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"}],"gene_count":240,"genes_by_uniquename":{"SJAG_00045":null,"SJAG_00087":null,"SJAG_00150":null,"SJAG_00156":null,"SJAG_00163":null,"SJAG_00164":null,"SJAG_00184":null,"SJAG_00210":null,"SJAG_00266":null,"SJAG_00269":null,"SJAG_00297":null,"SJAG_00342":null,"SJAG_00349":null,"SJAG_00440":null,"SJAG_00441":null,"SJAG_00581":null,"SJAG_00584":null,"SJAG_00613":null,"SJAG_00641":null,"SJAG_00693":null,"SJAG_00698":null,"SJAG_00735":null,"SJAG_00739":null,"SJAG_00743":null,"SJAG_00746":null,"SJAG_00766":null,"SJAG_00769":null,"SJAG_00792":null,"SJAG_00797":null,"SJAG_00802":null,"SJAG_00822":null,"SJAG_00868":null,"SJAG_00873":null,"SJAG_00896":null,"SJAG_00904":null,"SJAG_00909":null,"SJAG_00973":null,"SJAG_00987":null,"SJAG_00996":null,"SJAG_01016":null,"SJAG_01040":null,"SJAG_01047":null,"SJAG_01062":null,"SJAG_01110":null,"SJAG_01111":null,"SJAG_01113":null,"SJAG_01149":null,"SJAG_01150":null,"SJAG_01151":null,"SJAG_01193":null,"SJAG_01199":null,"SJAG_01213":null,"SJAG_01230":null,"SJAG_01243":null,"SJAG_01249":null,"SJAG_01307":null,"SJAG_01325":null,"SJAG_01403":null,"SJAG_01436":null,"SJAG_01441":null,"SJAG_01465":null,"SJAG_01475":null,"SJAG_01513":null,"SJAG_01517":null,"SJAG_01532":null,"SJAG_01583":null,"SJAG_01611":null,"SJAG_01622":null,"SJAG_01653":null,"SJAG_01658":null,"SJAG_01694":null,"SJAG_01711":null,"SJAG_01740":null,"SJAG_01764":null,"SJAG_01771":null,"SJAG_01778":null,"SJAG_01804":null,"SJAG_01805":null,"SJAG_01878":null,"SJAG_01916":null,"SJAG_01919":null,"SJAG_01938":null,"SJAG_01952":null,"SJAG_02018":null,"SJAG_02043":null,"SJAG_02048":null,"SJAG_02057":null,"SJAG_02058":null,"SJAG_02066":null,"SJAG_02138":null,"SJAG_02170":null,"SJAG_02189":null,"SJAG_02196":null,"SJAG_02218":null,"SJAG_02252":null,"SJAG_02254":null,"SJAG_02255":null,"SJAG_02303":null,"SJAG_02311":null,"SJAG_02314":null,"SJAG_02326":null,"SJAG_02329":null,"SJAG_02370":null,"SJAG_02385":null,"SJAG_02389":null,"SJAG_02391":null,"SJAG_02406":null,"SJAG_02415":null,"SJAG_02447":null,"SJAG_02458":null,"SJAG_02466":null,"SJAG_02472":null,"SJAG_02474":null,"SJAG_02494":null,"SJAG_02500":null,"SJAG_02541":null,"SJAG_02549":null,"SJAG_02551":null,"SJAG_02571":null,"SJAG_02573":null,"SJAG_02589":null,"SJAG_02592":null,"SJAG_02608":null,"SJAG_02671":null,"SJAG_02698":null,"SJAG_02709":null,"SJAG_02723":null,"SJAG_02730":null,"SJAG_02768":null,"SJAG_02773":null,"SJAG_02798":null,"SJAG_02810":null,"SJAG_02812":null,"SJAG_02846":null,"SJAG_02849":null,"SJAG_02869":null,"SJAG_02872":null,"SJAG_02906":null,"SJAG_02927":null,"SJAG_02938":null,"SJAG_02956":null,"SJAG_02981":null,"SJAG_03033":null,"SJAG_03061":null,"SJAG_03067":null,"SJAG_03118":null,"SJAG_03126":null,"SJAG_03143":null,"SJAG_03145":null,"SJAG_03183":null,"SJAG_03241":null,"SJAG_03255":null,"SJAG_03279":null,"SJAG_03283":null,"SJAG_03289":null,"SJAG_03346":null,"SJAG_03366":null,"SJAG_03421":null,"SJAG_03431":null,"SJAG_03441":null,"SJAG_03484":null,"SJAG_03501":null,"SJAG_03519":null,"SJAG_03538":null,"SJAG_03550":null,"SJAG_03573":null,"SJAG_03576":null,"SJAG_03579":null,"SJAG_03590":null,"SJAG_03599":null,"SJAG_03622":null,"SJAG_03668":null,"SJAG_03694":null,"SJAG_03696":null,"SJAG_03735":null,"SJAG_03752":null,"SJAG_03758":null,"SJAG_03776":null,"SJAG_03787":null,"SJAG_03839":null,"SJAG_03879":null,"SJAG_03883":null,"SJAG_03884":null,"SJAG_03897":null,"SJAG_03944":null,"SJAG_03967":null,"SJAG_03981":null,"SJAG_04005":null,"SJAG_04009":null,"SJAG_04036":null,"SJAG_04038":null,"SJAG_04092":null,"SJAG_04097":null,"SJAG_04099":null,"SJAG_04191":null,"SJAG_04194":null,"SJAG_04205":null,"SJAG_04206":null,"SJAG_04213":null,"SJAG_04249":null,"SJAG_04274":null,"SJAG_04369":null,"SJAG_04388":null,"SJAG_04421":null,"SJAG_04435":null,"SJAG_04551":null,"SJAG_04576":null,"SJAG_04596":null,"SJAG_04611":null,"SJAG_04613":null,"SJAG_04647":null,"SJAG_04666":null,"SJAG_04705":null,"SJAG_04712":null,"SJAG_04749":null,"SJAG_04755":null,"SJAG_04758":null,"SJAG_04771":null,"SJAG_04813":null,"SJAG_04820":null,"SJAG_04825":null,"SJAG_04839":null,"SJAG_04855":null,"SJAG_04946":null,"SJAG_04989":null,"SJAG_05020":null,"SJAG_05153":null,"SJAG_05187":null,"SJAG_05192":null,"SJAG_05203":null,"SJAG_05247":null,"SJAG_05265":null,"SJAG_05288":null,"SJAG_05313":null,"SJAG_05341":null,"SJAG_05343":null,"SJAG_06576":null,"SJAG_06599":null,"SJAG_06638":null,"SJAG_07011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of macromolecule biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null},"termid":"GO:0010557","terms_by_termid":{"GO:0010628":null,"GO:0032786":null,"GO:0032968":null,"GO:0045815":null,"GO:0045899":null,"GO:0045901":null,"GO:0045905":null,"GO:0045943":null,"GO:0045944":null,"GO:0045948":null,"GO:0048026":null,"GO:0048255":null,"GO:0060212":null,"GO:0060261":null,"GO:0060906":null,"GO:0060963":null,"GO:0061188":null,"GO:0070131":null,"GO:0070134":null,"GO:0070935":null,"GO:0120271":null,"GO:0140748":null,"GO:1904595":null,"GO:1905746":null,"GO:2000767":null}}


id: PBO:0054250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1633","termid":"PBO:0054250"}


id: PBO:0051464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 11-55 (non-functional)","termid":"PBO:0051464"}


id: GO:0071314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cocaine stimulus. Cocaine is a crystalline alkaloid obtained from the leaves of the coca plant.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cocaine","termid":"GO:0042220"},{"relation_name":"is_a","term_name":"cellular response to alkaloid","termid":"GO:0071312"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to cocaine","termid":"GO:0071314"}


id: PBO:0036455
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human COQ8","termid":"PBO:0036455"}


id: GO:0000931
data:
  {"annotated_genes":["SJAG_07018","SJAG_01756","SJAG_02886","SJAG_01215","SJAG_02431","SJAG_00856","SJAG_03835","SJAG_02609"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[80770,99458,101903,102802,108277,111444,112426,119053],"is_not":false,"summary":null,"term":"GO:0000931"}]},"cv_name":"cellular_component","definition":"A complex of gamma tubulin and associated proteins thought to be formed by multimerization of gamma-tubulin small complexes. An example of this structure is found in Schizosaccharomyces pombe.","definition_xrefs":["PMID:12134075","GOC:mtg_sensu","PMID:17021256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gamma-tubulin complex","termid":"GO:0000930"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00856":null,"SJAG_01215":null,"SJAG_01756":null,"SJAG_02431":null,"SJAG_02609":null,"SJAG_02886":null,"SJAG_03835":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0015630"],"is_obsolete":false,"name":"gamma-tubulin ring complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0055031","GO:0000926","GO:0055032","GO:0055033","GO:0061494","GO:0000924","GO:0000925","GO:0000929","GO:0008274"],"synonyms":[{"name":"gamma-TuRC","type":"exact"},{"name":"gamma-tubulin large complex","type":"related"},{"name":"gamma-tubulin large complex, centrosomal","type":"narrow"},{"name":"gamma-tubulin large complex, eMTOC","type":"narrow"},{"name":"gamma-tubulin large complex, equatorial microtubule organizing center","type":"narrow"},{"name":"gamma-tubulin large complex, equatorial microtubule organizing centre","type":"narrow"},{"name":"gamma-tubulin large complex, iMTOC","type":"narrow"},{"name":"gamma-tubulin large complex, interphase microtubule organizing center","type":"narrow"},{"name":"gamma-tubulin large complex, interphase microtubule organizing centre","type":"narrow"},{"name":"gamma-tubulin large complex, mitotic spindle pole body","type":"narrow"},{"name":"gamma-tubulin large complex, spindle pole body","type":"narrow"},{"name":"gamma-tubulin ring complex, centrosomal","type":"narrow"}],"termid":"GO:0000931","terms_by_termid":{"GO:0000931":null}}


id: MONDO:1010993
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hydrocephalus that occurs in rabbit.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrocephalus, non-human animal","termid":"MONDO:1010233"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrocephalus, rabbit","secondary_identifiers":["OMIA:000487-9986"],"termid":"MONDO:1010993","xrefs":{"Monarch":{"xref_id":"1010993"}}}


id: GO:1903676
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cap-dependent translational initiation.","definition_xrefs":["GOC:TermGenie","GOC:bf","GOC:PARL","PMID:11959995","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cap-dependent translational initiation","termid":"GO:1903674"},{"relation_name":"is_a","term_name":"positive regulation of cytoplasmic translational initiation","termid":"GO:1904690"},{"relation_name":"positively_regulates","term_name":"cap-dependent translational initiation","termid":"GO:0002191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0002181"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0002181"],"is_obsolete":false,"name":"positive regulation of cap-dependent translational initiation","synonyms":[{"name":"activation of cap-dependent translational initiation","type":"narrow"},{"name":"up regulation of cap-dependent translational initiation","type":"exact"},{"name":"up-regulation of cap-dependent translational initiation","type":"exact"},{"name":"upregulation of cap-dependent translational initiation","type":"exact"}],"termid":"GO:1903676"}


id: PBO:0055718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leishmanolysin like peptidase","termid":"PBO:0055718"}


id: GO:0072660
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is maintained in a specific location in the plasma membrane, and is prevented from moving elsewhere.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of protein location in membrane","termid":"GO:0072658"},{"relation_name":"part_of","term_name":"protein localization to plasma membrane","termid":"GO:0072659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"maintenance of protein location in plasma membrane","termid":"GO:0072660"}


id: GO:0071664
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains a catenin and TCF7L2 (TCF4), binds to the TCF DNA motif within a promoter element, and is involved in the regulation of WNT target gene transcription.","definition_xrefs":["PMID:14661054","GOC:rl","GOC:BHF","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"catenin-TCF7L2 complex","synonyms":[{"name":"catenin-TCF4 complex","type":"exact"}],"termid":"GO:0071664"}


id: GO:0032727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interferon-alpha production.","definition_xrefs":["GOC:mah","PMID:15546383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of type I interferon production","termid":"GO:0032481"},{"relation_name":"is_a","term_name":"regulation of interferon-alpha production","termid":"GO:0032647"},{"relation_name":"positively_regulates","term_name":"interferon-alpha production","termid":"GO:0032607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of interferon-alpha production","secondary_identifiers":["GO:0045356","GO:1902741"],"synonyms":[{"name":"activation of interferon-alpha production","type":"narrow"},{"name":"positive regulation of interferon-alpha biosynthetic process","type":"narrow"},{"name":"positive regulation of interferon-alpha secretion","type":"narrow"},{"name":"stimulation of interferon-alpha production","type":"narrow"},{"name":"up regulation of interferon-alpha production","type":"exact"},{"name":"up-regulation of interferon-alpha production","type":"exact"},{"name":"upregulation of interferon-alpha production","type":"exact"}],"termid":"GO:0032727"}


id: GO:0001808
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of type IV hypersensitivity, a type of inflammatory response.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of type IV hypersensitivity","termid":"GO:0001807"},{"relation_name":"is_a","term_name":"negative regulation of T cell mediated immunity","termid":"GO:0002710"},{"relation_name":"is_a","term_name":"negative regulation of hypersensitivity","termid":"GO:0002884"},{"relation_name":"negatively_regulates","term_name":"type IV hypersensitivity","termid":"GO:0001806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of type IV hypersensitivity","synonyms":[{"name":"down regulation of type IV hypersensitivity","type":"exact"},{"name":"down-regulation of type IV hypersensitivity","type":"exact"},{"name":"downregulation of type IV hypersensitivity","type":"exact"},{"name":"inhibition of type IV hypersensitivity","type":"narrow"}],"termid":"GO:0001808"}


id: GO:0052842
data:
  {"annotated_genes":["SJAG_01154","SJAG_04870","SJAG_00244"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58722,90535,107032],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052843"},{"annotations":[107033,90536],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052845"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: diphospho-1D-myo-inositol pentakisphosphate + H2O = 1D-myo-inositol hexakisphosphate + phosphate.","definition_xrefs":["PMID:10827188","PMID:11502751"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diphosphoinositol-polyphosphate diphosphatase activity","termid":"GO:0008486"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_01154":null,"SJAG_04870":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"inositol diphosphate pentakisphosphate diphosphatase activity","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-1855198","Reactome:R-HSA-2023971"],"termid":"GO:0052842","terms_by_termid":{"GO:0052843":null,"GO:0052845":null}}


id: GO:0035262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the gonads are generated and organized. A gonad is an animal organ producing gametes, e.g. the testes or the ovary in mammals.","definition_xrefs":["ISBN:0198612001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"part_of","term_name":"gonad development","termid":"GO:0008406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gonad morphogenesis","termid":"GO:0035262"}


id: PBO:0027462
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_error-prone_translesion_synthesis","termid":"PBO:0027462"}


id: MONDO:0015294
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nephrogenic systemic fibrosis (NSF) is a rare systemic fibrosing condition observed in renally impaired patients and characterized by a hardening and thickening of the skin with fibrotic plaques or papules, pruritus, joint pain and stiffness, muscle weakness, limitation of range of motion, and yellowed eyes. It is generally associated with administration of gadolinium-based magnetic resonance imaging contrast agents (GBCA) in patients with kidney disease.","definition_xrefs":["Orphanet:137617"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"nephrogenic systemic fibrosis","secondary_identifiers":["MESH:D054989","NCIT:C84920","icd11.foundation:1537082562","UMLS:C3888044","GARD:9725","ICD9:588.89","NORD:1498","SCTID:424114000","MedDRA:10067467","MEDGEN:854737"],"synonyms":[{"name":"NFD","type":"related"},{"name":"NSF","type":"related"},{"name":"nephrogenic fibrosing dermopathy","type":"exact"}],"termid":"MONDO:0015294","xrefs":{"Monarch":{"xref_id":"0015294"}}}


id: GO:0050157
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-ornithine = D-ornithine.","definition_xrefs":["EC:5.1.1.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid racemase activity","termid":"GO:0047661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"ornithine racemase activity","secondary_identifiers":["MetaCyc:ORNITHINE-RACEMASE-RXN","RHEA:11584"],"termid":"GO:0050157"}


id: GO:0045705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of salivary gland determination.","definition_xrefs":["GOC:tb","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of salivary gland boundary specification","termid":"GO:0045704"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"salivary gland boundary specification","termid":"GO:0007432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of salivary gland boundary specification","synonyms":[{"name":"down regulation of salivary gland determination","type":"exact"},{"name":"down-regulation of salivary gland determination","type":"exact"},{"name":"downregulation of salivary gland determination","type":"exact"},{"name":"inhibition of salivary gland determination","type":"narrow"},{"name":"negative regulation of salivary gland determination","type":"exact"}],"termid":"GO:0045705"}


id: MONDO:0015699
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"complement deficiency","termid":"MONDO:0003832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency due to a classical component pathway complement deficiency","secondary_identifiers":["GARD:15025","icd11.foundation:327609494","Orphanet:169147","MEDGEN:585054","UMLS:C0398750"],"synonyms":[{"name":"immunodeficiency due to C1, C4, or C2 component complement deficiency","type":"exact"},{"name":"immunodeficiency due to a C1, C4, or C2 component complement deficiency","type":"exact"},{"name":"immunodeficiency due to an early component of complement deficiency","type":"exact"}],"termid":"MONDO:0015699","xrefs":{"Monarch":{"xref_id":"0015699"}}}


id: PBO:0028145
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_nucleolus,_with_protein_mislocalized_to_cytoplasm","termid":"PBO:0028145"}


id: GO:0072088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the nephron epithelium are generated and organized. The nephron epithelium is a tissue that covers the surface of a nephron.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelium","termid":"GO:0002009"},{"relation_name":"part_of","term_name":"nephron epithelium development","termid":"GO:0072009"},{"relation_name":"part_of","term_name":"nephron morphogenesis","termid":"GO:0072028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nephron epithelium morphogenesis","termid":"GO:0072088"}


id: PBO:0065443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSMC2 pseudogene 2","termid":"PBO:0065443"}


id: GO:0075512
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any clathrin-mediated endocytosis that is involved in the uptake of a virus into a host cell. Begins by invagination of a specific region of the host cell plasma membrane around the bound virus to form a clathrin-coated pit, which then pinches off to form a clathrin-coated endocytic vesicle containing the virus.","definition_xrefs":["GOC:jl","GOC:bf","VZ:957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor-mediated endocytosis of virus by host cell","termid":"GO:0019065"},{"relation_name":"is_a","term_name":"clathrin-dependent endocytosis","termid":"GO:0072583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"clathrin-dependent endocytosis of virus by host cell","secondary_identifiers":["GO:0075516"],"synonyms":[{"name":"clathrin-mediated endocytosis of virus by host cell","type":"exact"},{"name":"viral entry into host cell via clathrin-mediated endocytosis","type":"related"},{"name":"viral entry into host cell via clathrin-mediated endocytosis followed by endosome lysis","type":"narrow"},{"name":"viral penetration via clathrin-mediated endocytosis","type":"exact"}],"termid":"GO:0075512"}


id: MONDO:0859366
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0000426"],"is_obsolete":false,"name":"hearing loss, autosomal dominant 85","secondary_identifiers":["MEDGEN:1824075","UMLS:C5774302","OMIM:620227"],"synonyms":[{"name":"deafness, autosomal dominant 85","type":"narrow"}],"termid":"MONDO:0859366","xrefs":{"Monarch":{"xref_id":"0859366"}}}


id: PBO:0082372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Basic leucine zipper (bZIP) transcription factor; physically interacts with the Tup1-Cyc8 complex and recruits Tup1p to its targets; overexpression increases sodium and lithium tolerance; computational analysis suggests a role in regulation of expression of genes involved in carbohydrate metabolism; YAP6 has a paralog, CIN5, that arose from the whole genome duplication","termid":"PBO:0082372"}


id: PR:A9ZLL8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lsd90 gene.","definition_xrefs":["PRO:DNx","UniProtKB:A9ZLL8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein lsd90 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16E9.16c","synonyms":[{"name":"90kDa large and small daughter protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-lsd90","type":"exact"}],"termid":"PR:A9ZLL8"}


id: GO:1901659
data:
  {"annotated_genes":["SJAG_01859","SJAG_04264","SJAG_06634","SJAG_01261","SJAG_03881","SJAG_05029","SJAG_00694","SJAG_00134","SJAG_04265","SJAG_01070","SJAG_05334","SJAG_03096","SJAG_01781","SJAG_00044","SJAG_04735","SJAG_02179"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90694],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046086"},{"annotations":[118700],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006169"},{"annotations":[71651],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006190"},{"annotations":[71652],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071590"},{"annotations":[71653],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071592"},{"annotations":[100399,100400],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043174"},{"annotations":[67896,95570,62567,75179],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006166"},{"annotations":[115676,99552],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043097"},{"annotations":[75065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046132"},{"annotations":[96516,74142,76617,75429],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031591"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glycosyl compound.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"},{"relation_name":"is_a","term_name":"glycosyl compound metabolic process","termid":"GO:1901657"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00134":null,"SJAG_00694":null,"SJAG_01070":null,"SJAG_01261":null,"SJAG_01781":null,"SJAG_01859":null,"SJAG_02179":null,"SJAG_03096":null,"SJAG_03881":null,"SJAG_04264":null,"SJAG_04265":null,"SJAG_04735":null,"SJAG_05029":null,"SJAG_05334":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycosyl compound biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000107":null},"synonyms":[{"name":"glycosyl compound anabolism","type":"exact"},{"name":"glycosyl compound biosynthesis","type":"exact"},{"name":"glycosyl compound formation","type":"exact"},{"name":"glycosyl compound synthesis","type":"exact"}],"termid":"GO:1901659","terms_by_termid":{"GO:0006166":null,"GO:0006169":null,"GO:0006190":null,"GO:0031591":null,"GO:0043097":null,"GO:0043174":null,"GO:0046086":null,"GO:0046132":null,"GO:0071590":null,"GO:0071592":null}}


id: GO:0039677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of the viral genome or a viral particle out of the host cell nucleus that involves disruption of the nuclear membrane envelope by the virus.","definition_xrefs":["VZ:2176"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exit of virus from host cell nucleus","termid":"GO:0039674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"exit of virus from host cell nucleus via nuclear envelope disassembly","synonyms":[{"name":"exit of virus from host cell nucleus via nuclear envelope breakdown","type":"exact"}],"termid":"GO:0039677"}


id: GO:0051537
data:
  {"annotated_genes":["SJAG_00822","SJAG_00217","SJAG_04016","SJAG_02495","SJAG_04098","SJAG_01935","SJAG_01417","SJAG_00601","SJAG_02016","SJAG_00244","SJAG_04397","SJAG_01841","SJAG_00792","SJAG_00260","SJAG_00455","SJAG_02474","SJAG_00532","SJAG_03701"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58957,64996,66907,67764,68808,70933,70981,73122,76019,79926,81077,81590,89878,95873,102309,116603,116914,118499],"is_not":false,"summary":null,"term":"GO:0051537"}]},"cv_name":"molecular_function","definition":"Binding to a 2 iron, 2 sulfur (2Fe-2S) cluster; this cluster consists of two iron atoms, with two inorganic sulfur atoms found between the irons and acting as bridging ligands.","definition_xrefs":["Wikipedia:Iron-sulfur_cluster","GOC:ai","PMID:15952888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster binding","termid":"GO:0051536"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00217":null,"SJAG_00244":null,"SJAG_00260":null,"SJAG_00455":null,"SJAG_00532":null,"SJAG_00601":null,"SJAG_00792":null,"SJAG_00822":null,"SJAG_01417":null,"SJAG_01841":null,"SJAG_01935":null,"SJAG_02016":null,"SJAG_02474":null,"SJAG_02495":null,"SJAG_03701":null,"SJAG_04016":null,"SJAG_04098":null,"SJAG_04397":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"2 iron, 2 sulfur cluster binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"2 Fe 2 S cluster binding","type":"exact"},{"name":"2 iron, 2 sulphur cluster binding","type":"exact"},{"name":"2Fe-2S cluster binding","type":"exact"},{"name":"diiron disulfide cluster binding","type":"exact"},{"name":"diiron disulphide cluster binding","type":"exact"},{"name":"iron-sulfur cluster 2Fe-2S binding","type":"exact"},{"name":"iron-sulphur cluster 2Fe-2S binding","type":"exact"}],"termid":"GO:0051537","terms_by_termid":{"GO:0051537":null}}


id: PBO:0067949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 251","termid":"PBO:0067949"}


id: PBO:0016050
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Suppressor of Tsm One","termid":"PBO:0016050"}


id: GO:0003991
data:
  {"annotated_genes":["SJAG_00636"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73165],"is_not":false,"summary":null,"term":"GO:0003991"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + N-acetyl-L-glutamate = ADP + N-acetyl-L-glutamate-5-phosphate.","definition_xrefs":["EC:2.7.2.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, carboxyl group as acceptor","termid":"GO:0016774"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00636":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016301","GO:0003824"],"is_obsolete":false,"name":"acetylglutamate kinase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["RHEA:14629","MetaCyc:ACETYLGLUTKIN-RXN"],"synonyms":[{"name":"ATP:N-acetyl-L-glutamate 5-phosphotransferase activity","type":"related"},{"name":"N-acetylglutamate 5-phosphotransferase activity","type":"related"},{"name":"N-acetylglutamate kinase activity","type":"related"},{"name":"N-acetylglutamate phosphokinase activity","type":"related"},{"name":"N-acetylglutamic 5-phosphotransferase activity","type":"related"},{"name":"acetylglutamate phosphokinase activity","type":"related"}],"termid":"GO:0003991","terms_by_termid":{"GO:0003991":null}}


id: PBO:0013090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1014 family protein, HMG-box clan member","termid":"PBO:0013090"}


id: MONDO:0020345
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete presynaptic congenital myasthenic syndrome (obsolete MONDO:0020345)","secondary_identifiers":["Orphanet:98914"],"synonyms":[{"name":"presynaptic congenital myasthenic syndromes","type":"related"}],"termid":"MONDO:0020345","xrefs":{"Monarch":{"xref_id":"0020345"}}}


id: PBO:0064499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit C","termid":"PBO:0064499"}


id: GO:0098880
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process which maintains the organization and the arrangement of proteins in the presynaptic specialization.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic density organization","termid":"GO:0097106"},{"relation_name":"is_a","term_name":"maintenance of synapse structure","termid":"GO:0099558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of postsynaptic specialization structure","termid":"GO:0098880"}


id: PR:P05511
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPMIT.06 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P05511"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized 91 kDa protein in cob intron (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPMIT.06","synonyms":[{"name":"Spom972h-SPMIT.06","type":"exact"}],"termid":"PR:P05511"}


id: PBO:0043301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain family 18 member C","termid":"PBO:0043301"}


id: PBO:0084196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone H4; core histone protein required for chromatin assembly and chromosome function; one of two identical histone proteins (see also HHF1); contributes to telomeric silencing; N-terminal domain involved in maintaining genomic integrity","termid":"PBO:0084196"}


id: PBO:0080386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS13C divergent transcript","termid":"PBO:0080386"}


id: PBO:0043290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain containing 9A","termid":"PBO:0043290"}


id: GO:0015391
data:
  {"annotated_genes":["SJAG_04714"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97355],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015505"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: nucleobase(out) + cation(out) = nucleobase(in) + cation(in).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase transmembrane transporter activity","termid":"GO:0015205"},{"relation_name":"is_a","term_name":"solute:monoatomic cation symporter activity","termid":"GO:0015294"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04714":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"nucleobase:monoatomic cation symporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nucleobase:cation symporter activity","type":"broad"}],"termid":"GO:0015391","terms_by_termid":{"GO:0015505":null}}


id: PBO:0031905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved transmembrane protein (predicted)","termid":"PBO:0031905"}


id: PBO:0081106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zyg-11 related cell cycle regulator","termid":"PBO:0081106"}


id: PBO:0040652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BBSome interacting protein 1 pseudogene 1","termid":"PBO:0040652"}


id: GO:0060422
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of a peptidyl-dipeptidase. Peptidyl-dipeptidase activity catalyzes the release of C-terminal dipeptides from a polypeptide chain.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidase inhibitor activity","termid":"GO:0030414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0004857","GO:0140678","GO:0030234"],"is_obsolete":false,"name":"peptidyl-dipeptidase inhibitor activity","termid":"GO:0060422"}


id: GO:0048753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a pigment granule.","definition_xrefs":["GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle organization","termid":"GO:0016050"},{"relation_name":"part_of","term_name":"cellular pigmentation","termid":"GO:0033059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pigment granule organization","synonyms":[{"name":"pigment granule organisation","type":"exact"},{"name":"pigment granule organization and biogenesis","type":"related"}],"termid":"GO:0048753"}


id: GO:1905456
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lymphoid progenitor cell differentiation.","definition_xrefs":["PMID:27010503","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hematopoietic progenitor cell differentiation","termid":"GO:1901532"},{"relation_name":"regulates","term_name":"lymphoid progenitor cell differentiation","termid":"GO:0002320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lymphoid progenitor cell differentiation","termid":"GO:1905456"}


id: GO:1990710
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A homodimeric mismatch repair complex involved in binding to and correcting insertion/deletion mutations.","definition_xrefs":["GOC:bhm","PMID:21666597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatch repair complex","termid":"GO:0032300"},{"relation_name":"is_a","term_name":"DNA repair complex","termid":"GO:1990391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"MutS complex","synonyms":[{"name":"MutS mismatch repair complex","type":"exact"}],"termid":"GO:1990710"}


id: GO:0060764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from one cell to another and contributes to the progression of the mammary gland, from its initial state to the mature structure.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"},{"relation_name":"part_of","term_name":"mammary gland development","termid":"GO:0030879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"cell-cell signaling involved in mammary gland development","synonyms":[{"name":"cell-cell signalling involved in mammary gland development","type":"exact"}],"termid":"GO:0060764"}


id: PR:O13691
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10371:SF3","OMA:SCHPO02202","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH-ubiquinone oxidoreductase 24 kDa subunit homolog C11E3.12, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11E3.12","secondary_identifiers":["UniProtKB:O13691"],"synonyms":[{"name":"Spom972h-NDUFV2","type":"exact"}],"termid":"PR:O13691"}


id: GO:0070279
data:
  {"annotated_genes":["SJAG_02305","SJAG_03434","SJAG_02205","SJAG_03861","SJAG_00937","SJAG_00432","SJAG_04178","SJAG_05230","SJAG_00714","SJAG_04149","SJAG_04678","SJAG_00582","SJAG_03961","SJAG_04988","SJAG_03914","SJAG_03671","SJAG_01019","SJAG_00673","SJAG_00097","SJAG_03312","SJAG_03055","SJAG_02791","SJAG_01766","SJAG_00830","SJAG_02972","SJAG_00495","SJAG_03306","SJAG_00186","SJAG_03102","SJAG_04145"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[62397,70412,75917,69412,57313,72268,69458,80148,60668,58152,112290,74199,75076,58503,66353,68921,67710,76163,66823,81044,67750,67484,65686,70208,81331,71626,73816,66584,64454,66769],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030170"}]},"cv_name":"molecular_function","definition":"Binding to a vitamin B6 compound: pyridoxal, pyridoxamine, pyridoxine, or the active form, pyridoxal phosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin binding","termid":"GO:0019842"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":30,"genes_by_uniquename":{"SJAG_00097":null,"SJAG_00186":null,"SJAG_00432":null,"SJAG_00495":null,"SJAG_00582":null,"SJAG_00673":null,"SJAG_00714":null,"SJAG_00830":null,"SJAG_00937":null,"SJAG_01019":null,"SJAG_01766":null,"SJAG_02205":null,"SJAG_02305":null,"SJAG_02791":null,"SJAG_02972":null,"SJAG_03055":null,"SJAG_03102":null,"SJAG_03306":null,"SJAG_03312":null,"SJAG_03434":null,"SJAG_03671":null,"SJAG_03861":null,"SJAG_03914":null,"SJAG_03961":null,"SJAG_04145":null,"SJAG_04149":null,"SJAG_04178":null,"SJAG_04678":null,"SJAG_04988":null,"SJAG_05230":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"vitamin B6 binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0070279","terms_by_termid":{"GO:0030170":null}}


id: GO:0031607
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The subunits forming the inner ring of the core complex of a proteasome located in the nucleus of a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome core complex, beta-subunit complex","termid":"GO:0019774"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear proteasome core complex","termid":"GO:0031601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"nuclear proteasome core complex, beta-subunit complex","termid":"GO:0031607"}


id: GO:0031776
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a melanin-concentrating hormone receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor binding","termid":"GO:0071855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"melanin-concentrating hormone receptor binding","synonyms":[{"name":"melanin-concentrating hormone receptor ligand","type":"narrow"}],"termid":"GO:0031776"}


id: MONDO:1011225
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Entropion that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"entropion, non-human animal","termid":"MONDO:1010323"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"entropion, dog","secondary_identifiers":["OMIA:000337-9615"],"termid":"MONDO:1011225","xrefs":{"Monarch":{"xref_id":"1011225"}}}


id: MONDO:0032680
data:
  {"annotated_genes":["SJAG_02316"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87856],"is_not":false,"summary":null,"term":"MONDO:0032680"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02316":null},"genotype_count":0,"is_obsolete":false,"name":"global developmental delay with or without impaired intellectual development","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1675328","OMIM:618330","UMLS:C5193032","GARD:16477"],"synonyms":[{"name":"GDDI","type":"related"},{"name":"GLOBAL DEVELOPMENTAL DELAY WITH OR WITHOUT IMPAIRED INTELLECTUAL DEVELOPMENT","type":"related"}],"termid":"MONDO:0032680","terms_by_termid":{"MONDO:0032680":null},"xrefs":{"Monarch":{"xref_id":"0032680"}}}


id: PBO:0057063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 146b","termid":"PBO:0057063"}


id: GO:0010848
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of chromatin disassembly. Chromatin disassembly is the controlled breakdown of chromatin from a higher order structure into its simpler subcomponents, DNA, histones, and other proteins.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of chromatin disassembly (obsolete GO:0010848)","termid":"GO:0010848"}


id: PBO:0110505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBXN2A pseudogene 1","termid":"PBO:0110505"}


id: PATO:0000647
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's undergoing unprogrammed cell death.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Necrotic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"necrotic","termid":"PATO:0000647"}


id: MONDO:0019222
data:
  {"annotated_genes":["SJAG_01070","SJAG_03556","SJAG_03712","SJAG_01199","SJAG_00582","SJAG_03671","SJAG_03659","SJAG_04042","SJAG_01466","SJAG_04459","SJAG_04425"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87416],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100255"},{"annotations":[87110],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009352"},{"annotations":[86806],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009058"},{"annotations":[87055,87054],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009353"},{"annotations":[88715],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013404"},{"annotations":[87755],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009607"},{"annotations":[87032,87031],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009354"},{"annotations":[87642],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009609"},{"annotations":[88473],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010184"}]},"cv_name":"mondo","definition":"An inherited metabolic disease that is has its basis in the disruption of sulfur amino acid metabolic process.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of amino acid and other organic acid metabolism","termid":"MONDO:0019189"},{"relation_name":"is_a","term_name":"disorder of organic acid metabolism","termid":"MONDO:0045022"},{"relation_name":"is_a","term_name":"sulfur metabolism disease","termid":"MONDO:0056803"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00582":null,"SJAG_01070":null,"SJAG_01199":null,"SJAG_01466":null,"SJAG_03556":null,"SJAG_03659":null,"SJAG_03671":null,"SJAG_03712":null,"SJAG_04042":null,"SJAG_04425":null,"SJAG_04459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"inborn disorder of methionine cycle and sulfur amino acid metabolism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:28882002","ICD9:270.4","Orphanet:79173","icd11.foundation:67872354","UMLS:C5680126","GARD:18953","MEDGEN:1842381"],"synonyms":[{"name":"cytosolic methyl group transfer or sulfur amino acid metabolism disorder","type":"exact"},{"name":"cytosolic methyl group transfer or sulphur amino acid metabolism disorder","type":"exact"},{"name":"disorder of methionine cycle and sulfur amino acid metabolism","type":"related"},{"name":"disorder of methionine cycle and sulphur amino acid metabolism","type":"related"},{"name":"inborn error of sulfur amino acid metabolic process","type":"exact"},{"name":"inborn error of sulphur amino acid metabolic process","type":"exact"},{"name":"inborn sulfur amino acid metabolic process disorder","type":"exact"},{"name":"inborn sulphur amino acid metabolic process disorder","type":"exact"},{"name":"rare inborn error of sulfur amino acid metabolic process","type":"exact"},{"name":"rare inborn error of sulphur amino acid metabolic process","type":"exact"}],"termid":"MONDO:0019222","terms_by_termid":{"MONDO:0009058":null,"MONDO:0009352":null,"MONDO:0009353":null,"MONDO:0009354":null,"MONDO:0009607":null,"MONDO:0009609":null,"MONDO:0010184":null,"MONDO:0013404":null,"MONDO:0100255":null},"xrefs":{"Monarch":{"xref_id":"0019222"}}}


id: PBO:0031472
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_silver","termid":"PBO:0031472"}


id: PBO:0067745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 44","termid":"PBO:0067745"}


id: PBO:0002553
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.3.1.51","termid":"PBO:0002553"}


id: GO:0051330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle 'gap' phase which is the interval between the completion of DNA segregation by meiosis and the beginning of DNA synthesis.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G1 phase","termid":"GO:0051318"},{"relation_name":"part_of","term_name":"meiotic interphase","termid":"GO:0051328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0051328"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051328","GO:0008150"],"is_obsolete":false,"name":"meiotic G1 phase","synonyms":[{"name":"G1 phase of meiotic cell cycle","type":"exact"}],"termid":"GO:0051330"}


id: PBO:0084599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YKL199C was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, designated YKL198C","termid":"PBO:0084599"}


id: GO:0007142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell cycle process comprising the steps by which a cell progresses through male meiosis II, the second meiotic division in the male germline.","definition_xrefs":["GOC:mah","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiosis II","termid":"GO:0007135"},{"relation_name":"is_a","term_name":"male meiotic nuclear division","termid":"GO:0007140"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0140013"],"is_obsolete":false,"name":"male meiosis II","synonyms":[{"name":"male meiosis II nuclear division","type":"exact"}],"termid":"GO:0007142"}


id: PBO:0001070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D123 family protein","termid":"PBO:0001070"}


id: PBO:0092003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silenced P-specific trancription factor Pi","termid":"PBO:0092003"}


id: GO:0046693
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The retention of sperm by a female following mating.","definition_xrefs":["PMID:10885514"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sperm competition","termid":"GO:0046692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sperm storage","synonyms":[{"name":"retention of sperm","type":"exact"},{"name":"sequestering of sperm","type":"exact"},{"name":"sequestration of sperm","type":"exact"},{"name":"sperm retention","type":"exact"},{"name":"sperm sequestering","type":"exact"},{"name":"sperm sequestration","type":"exact"},{"name":"storage of sperm","type":"exact"}],"termid":"GO:0046693"}


id: PBO:0111296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase chadoprop types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interpro_version","termid":"PBO:0111296"}


id: PBO:0082994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytosolic L-asparaginase, involved in asparagine catabolism; catalyzes hydrolysis of L-asparagine to aspartic acid and ammonia; important enzyme for the treatment of acute lymphoblastic leukemia; has low glutaminase activity and dependence; synthesized constitutively","termid":"PBO:0082994"}


id: PBO:0090221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA/snRNA/rRNA pseudouridine synthase Pus7","termid":"PBO:0090221"}


id: GO:0010464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mesenchymal cell proliferation. A mesenchymal cell is a cell that normally gives rise to other cells that are organized as three-dimensional masses, rather than sheets.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"regulates","term_name":"mesenchymal cell proliferation","termid":"GO:0010463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesenchymal cell proliferation","termid":"GO:0010464"}


id: PBO:0075807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small RNA binding exonuclease protection factor La like 6, pseudogene","termid":"PBO:0075807"}


id: MONDO:0002674
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"stricture or kinking of ureter","secondary_identifiers":["MEDGEN:574605","UMLS:C0341728","DOID:3508","ICD9:593.3"],"termid":"MONDO:0002674","xrefs":{"Monarch":{"xref_id":"0002674"}}}


id: PBO:0087331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sorting nexin family member; required for the cytoplasm-to-vacuole targeting (Cvt) pathway, endosomal sorting and selective autophagy; has a Phox homology domain that binds phosphatidylinositol-3-phosphate; interacts with Snx4p; potential Cdc28p substrate","termid":"PBO:0087331"}


id: PBO:0063541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylethanolamine binding protein 1","termid":"PBO:0063541"}


id: PBO:0027872
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_methylated_histone_binding","termid":"PBO:0027872"}


id: GO:0097316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an N-acetyl-D-glucosamine stimulus.","definition_xrefs":["GOC:di","PMID:21700702"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to N-acetyl-D-glucosamine","termid":"GO:0097315"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to N-acetyl-D-glucosamine","termid":"GO:0097316"}


id: PBO:0029319
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H2A_phosphorylation_at_centromere_outer_repeat","termid":"PBO:0029319"}


id: GO:0099015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The catabolic breakdown of the DNA of a host chromosome by a virus. This occurs during infection of bacteria by some phages. It frees up a large pool of nucleoside 5'-triphophates for use in viral DNA synthesis.","definition_xrefs":["PMID:5263754","PMID:163355","PMID:335083","PMID:3972821","VZ:3947"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"viral DNA genome replication","termid":"GO:0039693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"degradation of host chromosome by virus","termid":"GO:0099015"}


id: MONDO:1011416
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Calcinosis circumscripta that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease, non-human animal","termid":"MONDO:1011331"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcinosis circumscripta, non-human animal","secondary_identifiers":["OMIA:000158"],"termid":"MONDO:1011416","xrefs":{"Monarch":{"xref_id":"1011416"}}}


id: PBO:0086870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative spore wall protein; expression increases during sporulation; not an essential gene; YOR214C has a paralog, SPO19, that arose from the whole genome duplication","termid":"PBO:0086870"}


id: GO:0071679
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the migration of an axon growth cone of a commissural neuron is directed to its target in the brain in response to a combination of attractive and repulsive cues.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon guidance","termid":"GO:0007411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"commissural neuron axon guidance","synonyms":[{"name":"commissural neuron axon pathfinding","type":"exact"}],"termid":"GO:0071679"}


id: PBO:0073346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family B member 8","termid":"PBO:0073346"}


id: GO:0042357
data:
  {"annotated_genes":["SJAG_04282","SJAG_03362","SJAG_00381","SJAG_02420","SJAG_02421","SJAG_04866"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115449,117882,68868,79953,115455,66840],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009229"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving thiamine diphosphate, a derivative of thiamine (vitamin B1) which acts as a coenzyme in a range of processes including the Krebs cycle.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"},{"relation_name":"is_a","term_name":"thiamine-containing compound metabolic process","termid":"GO:0042723"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00381":null,"SJAG_02420":null,"SJAG_02421":null,"SJAG_03362":null,"SJAG_04282":null,"SJAG_04866":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0006766","GO:0044281"],"is_obsolete":false,"name":"thiamine diphosphate metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"TPP metabolic process","type":"exact"},{"name":"TPP metabolism","type":"exact"},{"name":"thiamin diphosphate metabolic process","type":"exact"},{"name":"thiamin diphosphate metabolism","type":"exact"},{"name":"thiamin pyrophosphate metabolic process","type":"exact"},{"name":"thiamin pyrophosphate metabolism","type":"exact"},{"name":"thiamine diphosphate metabolism","type":"exact"},{"name":"thiamine pyrophosphate metabolic process","type":"exact"},{"name":"thiamine pyrophosphate metabolism","type":"exact"}],"termid":"GO:0042357","terms_by_termid":{"GO:0009229":null}}


id: GO:0050730
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein phosphorylation","termid":"GO:0001932"},{"relation_name":"regulates","term_name":"peptidyl-tyrosine phosphorylation","termid":"GO:0018108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of peptidyl-tyrosine phosphorylation","termid":"GO:0050730"}


id: GO:0031665
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of signaling in response to detection of lipopolysaccharide.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to biotic stimulus","termid":"GO:0002832"},{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of lipopolysaccharide-mediated signaling pathway","termid":"GO:0031664"},{"relation_name":"is_a","term_name":"negative regulation of response to external stimulus","termid":"GO:0032102"},{"relation_name":"negatively_regulates","term_name":"lipopolysaccharide-mediated signaling pathway","termid":"GO:0031663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of lipopolysaccharide-mediated signaling pathway","synonyms":[{"name":"down regulation of lipopolysaccharide-mediated signaling pathway","type":"exact"},{"name":"down-regulation of lipopolysaccharide-mediated signaling pathway","type":"exact"},{"name":"downregulation of lipopolysaccharide-mediated signaling pathway","type":"exact"},{"name":"inhibition of lipopolysaccharide-mediated signaling pathway","type":"narrow"},{"name":"negative regulation of LPS-mediated signaling pathway","type":"exact"},{"name":"negative regulation of lipopolysaccharide-mediated signalling pathway","type":"exact"}],"termid":"GO:0031665"}


id: GO:0043987
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the addition of an phosphate group to a serine residue at position 10 of the histone.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-S10 phosphorylation (obsolete GO:0043987)","synonyms":[{"name":"histone H3 phosphorylation at S10","type":"exact"},{"name":"histone H3S10 phosphorylation","type":"exact"}],"termid":"GO:0043987"}


id: MONDO:0012775
data:
  {"annotated_genes":["SJAG_02744"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88093],"is_not":false,"summary":null,"term":"MONDO:0012775"}]},"cv_name":"mondo","definition":"Any thrombocytopenia in which the cause of the disease is a mutation in the CYCS gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited thrombocytopenia","termid":"MONDO:0100241"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02744":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"thrombocytopenia 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:394329","MESH:C567438","GARD:18289","OMIM:612004","UMLS:C2677608"],"synonyms":[{"name":"CYCS thrombocytopenia","type":"exact"},{"name":"THC4","type":"related"},{"name":"thrombocytopenia 4","type":"exact"},{"name":"thrombocytopenia caused by mutation in CYCS","type":"exact"},{"name":"thrombocytopenia type 4","type":"exact"},{"name":"thrombocytopenia, autosomal dominant, 4","type":"related"}],"termid":"MONDO:0012775","terms_by_termid":{"MONDO:0012775":null},"xrefs":{"Monarch":{"xref_id":"0012775"}}}


id: MONDO:0008065
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nasal groove, familial transverse","secondary_identifiers":["MEDGEN:322400","UMLS:C1834370","OMIM:161500"],"synonyms":[{"name":"nasal groove, familial transverse","type":"exact"}],"termid":"MONDO:0008065","xrefs":{"Monarch":{"xref_id":"0008065"}}}


id: MONDO:1011859
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spastic paresis, non-human animal","secondary_identifiers":["OMIA:000928"],"termid":"MONDO:1011859","xrefs":{"Monarch":{"xref_id":"1011859"}}}


id: MONDO:0019632
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lyme disease (named after the towns in the USA where the disease was first identified) is a bacterial infection caused by Borrelia burgdorferi.","definition_xrefs":["Orphanet:91546"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary bacterial infectious disease","termid":"MONDO:0000314"},{"relation_name":"is_a","term_name":"spirochaetales infections","termid":"MONDO:0021839"},{"relation_name":"is_a","term_name":"tick-borne infectious disease","termid":"MONDO:0025294"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lyme disease","secondary_identifiers":["ICD9:088.81","EFO:0008510","icd11.foundation:1600014919","DOID:11729","MedDRA:10025169","MEDGEN:44213","NCIT:C45161","ICD10CM:A69.2","UMLS:C0024198","SCTID:48982009","MESH:D008193"],"synonyms":[{"name":"Bannwarth syndrome","type":"exact"},{"name":"Bannworth's syndrome","type":"exact"},{"name":"Borrelia","type":"exact"},{"name":"Borrelia burgdorferi infection","type":"exact"},{"name":"Borreliella burgdorferi caused disease or disorder","type":"exact"},{"name":"Borreliella burgdorferi disease or disorder","type":"exact"},{"name":"Borreliella burgdorferi infectious disease","type":"exact"},{"name":"Lyme borreliosis","type":"exact"},{"name":"Lyme disease","type":"exact"},{"name":"Lyme neuroborreliosis","type":"exact"},{"name":"neuroborreliosis","type":"exact"},{"name":"neurological Lyme disease","type":"exact"}],"termid":"MONDO:0019632","xrefs":{"Monarch":{"xref_id":"0019632"}}}


id: PBO:0003802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmitoyltransferase Erf2 (predicted)","termid":"PBO:0003802"}


id: PBO:0017778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex TPR lobe subcomplex subunit Apc3","termid":"PBO:0017778"}


id: MONDO:0003271
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypothyroidism","termid":"MONDO:0005420"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iodine hypothyroidism","secondary_identifiers":["UMLS:C0154159","DOID:5083","SCTID:190279008","MEDGEN:509535","ICD9:244.2"],"termid":"MONDO:0003271","xrefs":{"Monarch":{"xref_id":"0003271"}}}


id: GO:0120296
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dopamine + L-glutaminyl-[protein] = 5-dopaminyl-L-glutamyl-[protein] + NH4(+).","definition_xrefs":["GOC:sp","PMID:22858378","PMID:32273471"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"peptide dopaminyltransferase activity","secondary_identifiers":["RHEA:66556"],"termid":"GO:0120296"}


id: MONDO:1011529
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Histiocytosis that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histiocytosis, non-human animal","termid":"MONDO:1011436"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histiocytosis, pig","secondary_identifiers":["OMIA:000474-9823"],"termid":"MONDO:1011529","xrefs":{"Monarch":{"xref_id":"1011529"}}}


id: PATO:0001274
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of grey color and low saturation.","definition_xrefs":["PATOC:GVG"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001274 pale grey (obsolete PATO:0001274)","termid":"PATO:0001274"}


id: PBO:0081689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 610","termid":"PBO:0081689"}


id: MONDO:0032882
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Heyn-Sproul-Jackson syndrome","secondary_identifiers":["MEDGEN:1684743","OMIM:618724","Orphanet:658595","UMLS:C5231475"],"synonyms":[{"name":"HESJAS","type":"related"},{"name":"HEYN-SPROUL-JACKSON SYNDROME","type":"related"},{"name":"Microcephaly, Short Stature, and Impaired Intellectual Development","type":"related"}],"termid":"MONDO:0032882","xrefs":{"Monarch":{"xref_id":"0032882"}}}


id: PBO:0004578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NatA N-acetyltransferase complex subunit (predicted)","termid":"PBO:0004578"}


id: GO:0102626
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (+)-costunolide + O2 + reduced [NADPH--hemoprotein reductase] = H+ + H2O + oxidized [NADPH--hemoprotein reductase] + parthenolide.","definition_xrefs":["RHEA:61320"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"parthenolide synthase activity","secondary_identifiers":["MetaCyc:RXN-15531"],"termid":"GO:0102626"}


id: MONDO:0002679
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An ischemic condition of the brain, producing a persistent focal neurological deficit in the area of distribution of the cerebral arteries.","definition_xrefs":["NCIT:C50486"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain infarction","termid":"MONDO:0005394"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebral infarction","secondary_identifiers":["ICD10CM:I63","ICD9:433.21","ICD9:433.31","DOID:3526","ICD9:433.81","SCTID:432504007","ICD9:433.01","ICD9:434.91","MEDGEN:3321","MESH:D002544","UMLS:C0007785","SCTID:20059004"],"synonyms":[{"name":"CVA - cerebral infarction","type":"exact"},{"name":"brain infarction of telencephalon","type":"exact"},{"name":"cerebral infarct","type":"exact"},{"name":"cerebral infarction","type":"exact"},{"name":"cerebral ischemia","type":"exact"},{"name":"cerebral, infarction","type":"exact"},{"name":"infarction, cerebral","type":"exact"},{"name":"telencephalon brain infarction","type":"exact"}],"termid":"MONDO:0002679","xrefs":{"Monarch":{"xref_id":"0002679"}}}


id: FYPO:0002510
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the palmitoylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein modification during vegetative growth","termid":"FYPO:0000547"},{"relation_name":"is_a","term_name":"abnormal protein palmitoylation during vegetative growth","termid":"FYPO:0002506"},{"relation_name":"is_a","term_name":"increased protein palmitoylation","termid":"FYPO:0002509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0002274"],"is_obsolete":false,"name":"increased protein palmitoylation during vegetative growth","synonyms":[{"name":"increased protein palmitoylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002510"}


id: MONDO:0008548
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete theophylline Biotransformation (obsolete MONDO:0008548)","secondary_identifiers":["OMIM:187650"],"synonyms":[{"name":"theophylline Biotransformation","type":"exact"}],"termid":"MONDO:0008548","xrefs":{"Monarch":{"xref_id":"0008548"}}}


id: PBO:0002054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit 6 (predicted)","termid":"PBO:0002054"}


id: GO:0102814
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: delphinidin 3,3',5-tri-O-beta-D-glucoside betaine + caffeoyl-CoA = delphinidin 3-O-glucosyl-5-O-(caffeoylglucoside-3'-O-glucoside) + coenzyme A.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete caffeoyl-CoA:delphinidin-3,5,3'-triglucoside 5-O-glucoside-6-O-hydroxycinnamoyltransferase activity (obsolete GO:0102814)","termid":"GO:0102814"}


id: PBO:0049028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 15","termid":"PBO:0049028"}


id: GO:0120179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of an adherens junction into its constituent components. An adherens junction is a cell-cell junction composed of the epithelial cadherin-catenin complex at which the cytoplasmic face of the plasma membrane is attached to actin filaments.","definition_xrefs":["GOC:aruk","GOC:bc","PMID:25490267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adherens junction organization","termid":"GO:0034332"},{"relation_name":"is_a","term_name":"cell-cell junction disassembly","termid":"GO:0150147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adherens junction disassembly","termid":"GO:0120179"}


id: GO:0035768
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of an endothelial cell in response to the presence of fibroblast growth factor (FGF).","definition_xrefs":["GOC:BHF","CL:0000115"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell chemotaxis to fibroblast growth factor","termid":"GO:0035766"},{"relation_name":"is_a","term_name":"endothelial cell chemotaxis","termid":"GO:0035767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endothelial cell chemotaxis to fibroblast growth factor","termid":"GO:0035768"}


id: PBO:0083488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene YBR177C","termid":"PBO:0083488"}


id: PBO:0029251
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_medial_cortical_node","termid":"PBO:0029251"}


id: GO:0034181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of toll-like receptor 13 signaling pathway.","definition_xrefs":["PMID:17328678","GOC:add","PMID:16551253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of toll-like receptor 13 signaling pathway","termid":"GO:0034179"},{"relation_name":"is_a","term_name":"positive regulation of pattern recognition receptor signaling pathway","termid":"GO:0062208"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"toll-like receptor 13 signaling pathway","termid":"GO:0034178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of toll-like receptor 13 signaling pathway","synonyms":[{"name":"positive regulation of TLR13 signaling pathway","type":"exact"},{"name":"positive regulation of toll-like receptor 13 signalling pathway","type":"exact"}],"termid":"GO:0034181"}


id: GO:0030647
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving an aminoglycoside antibiotic, any member of a group of broad spectrum antibiotics, of similar toxicity and pharmacology, that contain an aminodeoxysugar, an amino- or guanidino-substituted inositol ring, and one or more residues of other sugars. The group includes streptomycin, neomycin, framycetin, kanamycin, paromomycin, and gentamicin.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside metabolic process","termid":"GO:0016137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aminoglycoside antibiotic metabolic process","synonyms":[{"name":"aminoglycoside antibiotic metabolism","type":"exact"}],"termid":"GO:0030647"}


id: PR:O59816
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04244","PRO:DNx","PANTHER:PTHR23151:SF9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC794.07","secondary_identifiers":["UniProtKB:O59816"],"synonyms":[{"name":"PDC-E2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PDCE2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-DLAT","type":"exact"},{"name":"dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"pyruvate dehydrogenase complex component E2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59816"}


id: MONDO:0044986
data:
  {"annotated_genes":["SJAG_02923","SJAG_01697","SJAG_03536","SJAG_02572","SJAG_04745","SJAG_02342","SJAG_00993","SJAG_03453","SJAG_02648","SJAG_02453","SJAG_00570","SJAG_01407","SJAG_01181"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88090],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012146"},{"annotations":[87458],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011336"},{"annotations":[88414],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013135"},{"annotations":[87764],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011997"},{"annotations":[88264],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007918"},{"annotations":[88116],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011257"},{"annotations":[88721],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009756"},{"annotations":[87990],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011871"},{"annotations":[87983],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011873"},{"annotations":[89075,89076,89074],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008104"},{"annotations":[87558],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033669"},{"annotations":[88441],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012371"},{"annotations":[88232],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013186"}]},"cv_name":"mondo","definition":"A disease or disorder that involves the lymphoid system.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00570":null,"SJAG_00993":null,"SJAG_01181":null,"SJAG_01407":null,"SJAG_01697":null,"SJAG_02342":null,"SJAG_02453":null,"SJAG_02572":null,"SJAG_02648":null,"SJAG_02923":null,"SJAG_03453":null,"SJAG_03536":null,"SJAG_04745":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"lymphoid system disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:9829","UMLS:C0024228","SCTID:111590001"],"synonyms":[{"name":"disease of lymphoid system","type":"exact"},{"name":"disease or disorder of lymphoid system","type":"exact"},{"name":"disorder of lymphoid system","type":"exact"},{"name":"lymphoid system disease","type":"exact"},{"name":"lymphoid system disease or disorder","type":"exact"}],"termid":"MONDO:0044986","terms_by_termid":{"MONDO:0007918":null,"MONDO:0008104":null,"MONDO:0009756":null,"MONDO:0011257":null,"MONDO:0011336":null,"MONDO:0011871":null,"MONDO:0011873":null,"MONDO:0011997":null,"MONDO:0012146":null,"MONDO:0012371":null,"MONDO:0013135":null,"MONDO:0013186":null,"MONDO:0033669":null},"xrefs":{"Monarch":{"xref_id":"0044986"}}}


id: PBO:0046317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enkurin, TRPC channel interacting protein","termid":"PBO:0046317"}


id: GO:0045603
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of endothelial cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell differentiation","termid":"GO:0030858"},{"relation_name":"is_a","term_name":"regulation of endothelial cell differentiation","termid":"GO:0045601"},{"relation_name":"positively_regulates","term_name":"endothelial cell differentiation","termid":"GO:0045446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of endothelial cell differentiation","synonyms":[{"name":"activation of endothelial cell differentiation","type":"narrow"},{"name":"stimulation of endothelial cell differentiation","type":"narrow"},{"name":"up regulation of endothelial cell differentiation","type":"exact"},{"name":"up-regulation of endothelial cell differentiation","type":"exact"},{"name":"upregulation of endothelial cell differentiation","type":"exact"}],"termid":"GO:0045603"}


id: GO:0061398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the frequency, rate or extent of transcription from an RNA polymerase II promoter in response to an copper ion stimulus.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription from RNA polymerase II promoter in response to copper ion (obsolete GO:0061398)","termid":"GO:0061398"}


id: PBO:0091692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-methyltransferase, human COMT catechol homolog 1","termid":"PBO:0091692"}


id: MONDO:0010401
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked myopathy with postural muscle atrophy is a rare progressive muscular dystrophy characterized by an adult-onset scapulo-axio-peroneal myopathy. Clinical presentation includes shoulder girdle atrophy, scapular winging, axial muscular atrophy of postural muscles combined with a generalized hypertrophy. Typically, neck rigidity, rigid spine, Achilles tendon shortening, and respiratory insufficiency later in disease course are present.","definition_xrefs":["Orphanet:178461"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked Emery-Dreifuss muscular dystrophy","termid":"MONDO:0010680"},{"relation_name":"is_a","term_name":"FHL1-related myopathy","termid":"MONDO:0800462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0005336"],"is_obsolete":false,"name":"X-linked myopathy with postural muscle atrophy","secondary_identifiers":["OMIM:300696","GARD:17081","icd11.foundation:420677690","MEDGEN:395525","UMLS:C2678055","DOID:0070251"],"synonyms":[{"name":"Ehlers-Danlos syndrome, classic-like, 1","type":"related"},{"name":"Emery-Dreifuss muscular dystrophy 6, X-linked","type":"related"},{"name":"X-linked myopathy with postural muscle atrophy","type":"exact"},{"name":"XMPMA","type":"exact"},{"name":"myopathy, X-linked, with postural muscle atrophy","type":"related"},{"name":"myopathy, X-linked, with postural muscle atrophy, X-linked recessive","type":"exact"}],"termid":"MONDO:0010401","xrefs":{"Monarch":{"xref_id":"0010401"}}}


id: PBO:0046200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin A3 family member D, pseudogene","termid":"PBO:0046200"}


id: FYPO:0005821
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of NEDD8-specific protease activity (deneddylase activity) is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal peptidase activity","termid":"FYPO:0000666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000652","FYPO:0001985","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"abnormal NEDD8-specific protease activity","synonyms":[{"name":"abnormal deneddylase activity","type":"exact"}],"termid":"FYPO:0005821"}


id: PBO:0079531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 small nuclear RNA auxiliary factor 1","termid":"PBO:0079531"}


id: MONDO:0012785
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited hypertrophic pyloric stenosis","termid":"MONDO:0100239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"pyloric stenosis, infantile hypertrophic, 3","secondary_identifiers":["OMIM:612017","MEDGEN:383144","MESH:C567435","UMLS:C2677588"],"synonyms":[{"name":"IHPS3","type":"exact"},{"name":"pyloric stenosis, infantile hypertrophic, 3","type":"exact"}],"termid":"MONDO:0012785","xrefs":{"Monarch":{"xref_id":"0012785"}}}


id: PBO:0082120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acetyltransferase; catalyzes trichothecene 3-O-acetylation, suggesting a possible role in trichothecene biosynthesis","termid":"PBO:0082120"}


id: MONDO:0957114
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"muscular channelopathy","termid":"MONDO:0019119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurological muscular channelopathy due to a genetic potassium channel defect","secondary_identifiers":["MEDGEN:1842582","UMLS:C5681685","Orphanet:98741","GARD:19566"],"termid":"MONDO:0957114","xrefs":{"Monarch":{"xref_id":"0957114"}}}


id: PBO:0064000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 34","termid":"PBO:0064000"}


id: MONDO:0000114
data:
  {"annotated_genes":["SJAG_00421"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87543],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011781"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00421":null},"genotype_count":0,"is_obsolete":false,"name":"cerebelloparenchymal disorder","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0000114","terms_by_termid":{"MONDO:0011781":null},"xrefs":{"Monarch":{"xref_id":"0000114"}}}


id: PR:Q4ZGE2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC3D6.16 gene.","definition_xrefs":["UniProtKB:Q4ZGE2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C3D6.16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3D6.16","synonyms":[{"name":"Spom972h-SPBC3D6.16","type":"exact"}],"termid":"PR:Q4ZGE2"}


id: GO:1900753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a doxorubicin into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["PMID:19063901","PMID:9651400","GOC:TermGenie","PMID:12057006","PMID:19651502","PMID:15090538"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"},{"relation_name":"is_a","term_name":"glycoside transport","termid":"GO:1901656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"doxorubicin transport","synonyms":[{"name":"(1S,3S)-3,5,12-trihydroxy-3-(hydroxyacetyl)-10-methoxy-6,11-dioxo-1,2,3,4,6,11-hexahydrotetracen-1-yl 3-amino-2,3,6-trideoxy-alpha-L-lyxo-hexopyranoside transport","type":"exact"},{"name":"(1S,3S)-3-glycoloyl-3,5,12-trihydroxy-10-methoxy-6,11-dioxo-1,2,3,4,6,11-hexahydrotetracen-1-yl 3-amino-2,3,6-trideoxy-alpha-L-lyxo-hexopyranoside transport","type":"related"},{"name":"(8S-cis)-10-((3-amino-2,3,6-trideoxy-alpha-L-lyxo-hexopyranosyl)oxy)-7,8,9,10-tetrahydro-6,8,11-trihydroxy-8-(hydroxyacetyl)-1-methoxy-5,12-naphthacenedione transport","type":"related"},{"name":"14-hydroxydaunomycin transport","type":"related"},{"name":"14-hydroxydaunorubicine transport","type":"related"},{"name":"Adriamycin transport","type":"related"},{"name":"doxorubicine transport","type":"related"},{"name":"doxorubicinum transport","type":"related"}],"termid":"GO:1900753"}


id: GO:0046532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of photoreceptor cell differentiation. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuron differentiation","termid":"GO:0045664"},{"relation_name":"regulates","term_name":"photoreceptor cell differentiation","termid":"GO:0046530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of photoreceptor cell differentiation","secondary_identifiers":["GO:0045673"],"synonyms":[{"name":"regulation of photoreceptor differentiation","type":"exact"}],"termid":"GO:0046532"}


id: PR:O74896
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mhf2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74896"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MHF histone-fold complex subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC576.12c","synonyms":[{"name":"MHF histone-fold complex subunit 1 (Schizosaccharomyces pombe 972h-)","type":"related"},{"name":"SPCC576.12c","type":"related"},{"name":"Spom972h-mhf2","type":"exact"}],"termid":"PR:O74896"}


id: MONDO:0009317
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A trichothiodystrophy that is non-photosensitive","definition_xrefs":["Wikipedia:Trichothiodystrophy"],"gene_count":0,"genotype_count":0,"name":"obsolete nonphotosensitive trichothiodystrophy (obsolete MONDO:0009317)","secondary_identifiers":["Orphanet:1245","DOID:0111867"],"termid":"MONDO:0009317","xrefs":{"Monarch":{"xref_id":"0009317"}}}


id: PBO:0082169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AdoMet-dependent methyltransferase; involved in rRNA processing and 60S ribosomal subunit maturation; methylates G2922 in the tRNA docking site of the large subunit rRNA and in the absence of snR52, U2921; suppressor of PAB1 mutants","termid":"PBO:0082169"}


id: GO:0005654
data:
  {"annotated_genes":["SJAG_01540","SJAG_04190","SJAG_00644","SJAG_02348","SJAG_03927","SJAG_02070","SJAG_03061","SJAG_02981","SJAG_04420","SJAG_03745","SJAG_05282","SJAG_02098","SJAG_02242","SJAG_03939","SJAG_03206","SJAG_04183","SJAG_04995","SJAG_04312","SJAG_03181","SJAG_03627","SJAG_01804","SJAG_00874","SJAG_01494","SJAG_01267","SJAG_03884","SJAG_01765","SJAG_03923","SJAG_01761","SJAG_03846","SJAG_04368","SJAG_03900","SJAG_02101","SJAG_03618","SJAG_04596","SJAG_03551","SJAG_03051","SJAG_00941","SJAG_03451","SJAG_00458","SJAG_04030","SJAG_03252","SJAG_00369","SJAG_03680","SJAG_02778","SJAG_01230","SJAG_04355","SJAG_00868","SJAG_03579","SJAG_00857","SJAG_01762","SJAG_05321","SJAG_01808","SJAG_00421","SJAG_04977","SJAG_00483","SJAG_02170","SJAG_04097","SJAG_00100","SJAG_01325","SJAG_00116","SJAG_00139","SJAG_00512","SJAG_02720","SJAG_02074","SJAG_02458","SJAG_00400","SJAG_00540","SJAG_00696","SJAG_01713","SJAG_03709","SJAG_01710","SJAG_00150","SJAG_05232","SJAG_00961","SJAG_00119","SJAG_00872","SJAG_04576","SJAG_00888","SJAG_02506","SJAG_04894","SJAG_04527","SJAG_00701","SJAG_02385","SJAG_04670","SJAG_04638","SJAG_03118","SJAG_01354","SJAG_02768","SJAG_00756","SJAG_02394","SJAG_02097","SJAG_02607","SJAG_04917","SJAG_03128","SJAG_02416","SJAG_00581","SJAG_00884","SJAG_02439","SJAG_04389","SJAG_02037","SJAG_02329","SJAG_04411","SJAG_01047","SJAG_02451","SJAG_04346","SJAG_03125","SJAG_04574","SJAG_00456","SJAG_03867","SJAG_00082","SJAG_00341","SJAG_02057","SJAG_04758","SJAG_03441","SJAG_03255","SJAG_04936","SJAG_02156","SJAG_04396","SJAG_03473","SJAG_03844","SJAG_05192","SJAG_02500","SJAG_02119","SJAG_02846","SJAG_04768","SJAG_03694","SJAG_02174","SJAG_03901","SJAG_03431","SJAG_03090","SJAG_04062","SJAG_01313","SJAG_02393","SJAG_02541","SJAG_00741","SJAG_01149","SJAG_04186","SJAG_04852","SJAG_01151","SJAG_03211","SJAG_00536","SJAG_00769","SJAG_00934","SJAG_02798","SJAG_03036","SJAG_04654","SJAG_00901","SJAG_00323","SJAG_04009","SJAG_04933","SJAG_00840","SJAG_04559","SJAG_00159","SJAG_02244","SJAG_00088","SJAG_00327","SJAG_03107","SJAG_04353","SJAG_02667","SJAG_04274","SJAG_04006","SJAG_00758","SJAG_00584","SJAG_07011","SJAG_04601","SJAG_01207","SJAG_00930","SJAG_00995","SJAG_01610","SJAG_01926","SJAG_03481","SJAG_00618","SJAG_03685","SJAG_00735","SJAG_04614","SJAG_00441","SJAG_03230","SJAG_03967","SJAG_03285","SJAG_03982","SJAG_01125","SJAG_02238","SJAG_02466","SJAG_01624","SJAG_01475","SJAG_03752","SJAG_00728","SJAG_02571","SJAG_02990","SJAG_00095","SJAG_04547","SJAG_03836","SJAG_00170","SJAG_01867","SJAG_01436","SJAG_00896","SJAG_02382","SJAG_01213","SJAG_02622","SJAG_04341","SJAG_03145","SJAG_05301","SJAG_04140","SJAG_02800","SJAG_04210","SJAG_04261","SJAG_01110","SJAG_00349","SJAG_01465"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[60538,64077,65251,71232,72083,74366,74608,75292,75403,76726,77342,77486,77502,78434,81274,81577,81620,81906,82103,90304,91401,91807,92591,101686,102428,103321,103665,104149,105361,105971,106040,106623,106952,108080,110198,110439,110644,111434,111508,113048,113553,119809,121249],"is_not":false,"summary":null,"term":"GO:0005654"},{"annotations":[97850,116976],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0015030"},{"annotations":[72832,80382,78002,74265,68492],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016593"},{"annotations":[89293,94045,113147,99947,106115],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071920"},{"annotations":[112329,120689,96155,98536,115839,119555],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043494"},{"annotations":[81223,97615,112763],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070692"},{"annotations":[115029,115421,61803,80015,75521,109884,67340,57272,63646,73729,113492,78765,109666,58643,113235,61861,95747],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031261"},{"annotations":[74037,74695],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032044"},{"annotations":[64675,78142],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070449"},{"annotations":[73160,79216],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0035101"},{"annotations":[81714,72101,81996,81100],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000811"},{"annotations":[65541],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070823"},{"annotations":[113317,114612,76050,76138,77599,92602,111102],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016604"},{"annotations":[89298,93678,95253,113151,106119,94049,109286,119978],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990251"},{"annotations":[63645,112409,58641,75519,57270,113238,73413,113495,67339,61802,61860,105140,109669,115032,109887],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005656"},{"annotations":[110718,110875],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070691"},{"annotations":[76923,77276,78704,78282,114706,74469,76222,72402,79836,75033,80688,72804,77117],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005665"},{"annotations":[63732,116094,77694,64515,77885,77566,82008,61573,90921,79084,80718,108582,96453],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0033698"},{"annotations":[116004,79085,80438,90922,112323,79883,116095,64516,61574,76528,106546,77567,80719,82009,95052,96454,108583],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070210"},{"annotations":[63731,78336,95591,74457,97264,74710],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032221"},{"annotations":[73631,92521,75688,111193,117568,77237,80252,73025],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0048188"},{"annotations":[80887,68393,95053,106007,80437],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034967"},{"annotations":[113959,73400,109997,115147],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070824"},{"annotations":[101754,115043,60438],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032783"},{"annotations":[98462,110906,115175,75410,71831,78697,74662,109716,100777,100048,115004,119314,81765,94185,78029,116574],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000812"},{"annotations":[76549,80393],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0008023"},{"annotations":[73786,80395],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005672"},{"annotations":[60015,75389,76181,72379,119429,76699,73107,58180,82082,97392,69632,78455,77314,105435,78584,71636],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005669"},{"annotations":[77901,71895],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005673"},{"annotations":[80946,71637,82197],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005674"},{"annotations":[71878,110823,93985,116687,80463,77905,72104,76126],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005675"},{"annotations":[61470,67369,77961],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070985"}]},"cv_name":"cellular_component","definition":"That part of the nuclear content other than the chromosomes or the nucleolus.","definition_xrefs":["GOC:ma","ISBN:0124325653"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"nuclear lumen","termid":"GO:0031981"}],"gene_count":209,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00088":null,"SJAG_00095":null,"SJAG_00100":null,"SJAG_00116":null,"SJAG_00119":null,"SJAG_00139":null,"SJAG_00150":null,"SJAG_00159":null,"SJAG_00170":null,"SJAG_00323":null,"SJAG_00327":null,"SJAG_00341":null,"SJAG_00349":null,"SJAG_00369":null,"SJAG_00400":null,"SJAG_00421":null,"SJAG_00441":null,"SJAG_00456":null,"SJAG_00458":null,"SJAG_00483":null,"SJAG_00512":null,"SJAG_00536":null,"SJAG_00540":null,"SJAG_00581":null,"SJAG_00584":null,"SJAG_00618":null,"SJAG_00644":null,"SJAG_00696":null,"SJAG_00701":null,"SJAG_00728":null,"SJAG_00735":null,"SJAG_00741":null,"SJAG_00756":null,"SJAG_00758":null,"SJAG_00769":null,"SJAG_00840":null,"SJAG_00857":null,"SJAG_00868":null,"SJAG_00872":null,"SJAG_00874":null,"SJAG_00884":null,"SJAG_00888":null,"SJAG_00896":null,"SJAG_00901":null,"SJAG_00930":null,"SJAG_00934":null,"SJAG_00941":null,"SJAG_00961":null,"SJAG_00995":null,"SJAG_01047":null,"SJAG_01110":null,"SJAG_01125":null,"SJAG_01149":null,"SJAG_01151":null,"SJAG_01207":null,"SJAG_01213":null,"SJAG_01230":null,"SJAG_01267":null,"SJAG_01313":null,"SJAG_01325":null,"SJAG_01354":null,"SJAG_01436":null,"SJAG_01465":null,"SJAG_01475":null,"SJAG_01494":null,"SJAG_01540":null,"SJAG_01610":null,"SJAG_01624":null,"SJAG_01710":null,"SJAG_01713":null,"SJAG_01761":null,"SJAG_01762":null,"SJAG_01765":null,"SJAG_01804":null,"SJAG_01808":null,"SJAG_01867":null,"SJAG_01926":null,"SJAG_02037":null,"SJAG_02057":null,"SJAG_02070":null,"SJAG_02074":null,"SJAG_02097":null,"SJAG_02098":null,"SJAG_02101":null,"SJAG_02119":null,"SJAG_02156":null,"SJAG_02170":null,"SJAG_02174":null,"SJAG_02238":null,"SJAG_02242":null,"SJAG_02244":null,"SJAG_02329":null,"SJAG_02348":null,"SJAG_02382":null,"SJAG_02385":null,"SJAG_02393":null,"SJAG_02394":null,"SJAG_02416":null,"SJAG_02439":null,"SJAG_02451":null,"SJAG_02458":null,"SJAG_02466":null,"SJAG_02500":null,"SJAG_02506":null,"SJAG_02541":null,"SJAG_02571":null,"SJAG_02607":null,"SJAG_02622":null,"SJAG_02667":null,"SJAG_02720":null,"SJAG_02768":null,"SJAG_02778":null,"SJAG_02798":null,"SJAG_02800":null,"SJAG_02846":null,"SJAG_02981":null,"SJAG_02990":null,"SJAG_03036":null,"SJAG_03051":null,"SJAG_03061":null,"SJAG_03090":null,"SJAG_03107":null,"SJAG_03118":null,"SJAG_03125":null,"SJAG_03128":null,"SJAG_03145":null,"SJAG_03181":null,"SJAG_03206":null,"SJAG_03211":null,"SJAG_03230":null,"SJAG_03252":null,"SJAG_03255":null,"SJAG_03285":null,"SJAG_03431":null,"SJAG_03441":null,"SJAG_03451":null,"SJAG_03473":null,"SJAG_03481":null,"SJAG_03551":null,"SJAG_03579":null,"SJAG_03618":null,"SJAG_03627":null,"SJAG_03680":null,"SJAG_03685":null,"SJAG_03694":null,"SJAG_03709":null,"SJAG_03745":null,"SJAG_03752":null,"SJAG_03836":null,"SJAG_03844":null,"SJAG_03846":null,"SJAG_03867":null,"SJAG_03884":null,"SJAG_03900":null,"SJAG_03901":null,"SJAG_03923":null,"SJAG_03927":null,"SJAG_03939":null,"SJAG_03967":null,"SJAG_03982":null,"SJAG_04006":null,"SJAG_04009":null,"SJAG_04030":null,"SJAG_04062":null,"SJAG_04097":null,"SJAG_04140":null,"SJAG_04183":null,"SJAG_04186":null,"SJAG_04190":null,"SJAG_04210":null,"SJAG_04261":null,"SJAG_04274":null,"SJAG_04312":null,"SJAG_04341":null,"SJAG_04346":null,"SJAG_04353":null,"SJAG_04355":null,"SJAG_04368":null,"SJAG_04389":null,"SJAG_04396":null,"SJAG_04411":null,"SJAG_04420":null,"SJAG_04527":null,"SJAG_04547":null,"SJAG_04559":null,"SJAG_04574":null,"SJAG_04576":null,"SJAG_04596":null,"SJAG_04601":null,"SJAG_04614":null,"SJAG_04638":null,"SJAG_04654":null,"SJAG_04670":null,"SJAG_04758":null,"SJAG_04768":null,"SJAG_04852":null,"SJAG_04894":null,"SJAG_04917":null,"SJAG_04933":null,"SJAG_04936":null,"SJAG_04977":null,"SJAG_04995":null,"SJAG_05192":null,"SJAG_05232":null,"SJAG_05282":null,"SJAG_05301":null,"SJAG_05321":null,"SJAG_07011":null},"genotype_count":0,"in_subsets":["cc_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634"],"is_obsolete":false,"name":"nucleoplasm","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000117":null,"PMID:26774782":null},"secondary_identifiers":["NIF_Subcellular:sao661522542","Wikipedia:Nucleoplasm"],"termid":"GO:0005654","terms_by_termid":{"GO:0000811":null,"GO:0000812":null,"GO:0005654":null,"GO:0005656":null,"GO:0005665":null,"GO:0005669":null,"GO:0005672":null,"GO:0005673":null,"GO:0005674":null,"GO:0005675":null,"GO:0008023":null,"GO:0015030":null,"GO:0016593":null,"GO:0016604":null,"GO:0031261":null,"GO:0032044":null,"GO:0032221":null,"GO:0032783":null,"GO:0033698":null,"GO:0034967":null,"GO:0035101":null,"GO:0043494":null,"GO:0048188":null,"GO:0070210":null,"GO:0070449":null,"GO:0070691":null,"GO:0070692":null,"GO:0070823":null,"GO:0070824":null,"GO:0070985":null,"GO:0071920":null,"GO:1990251":null}}


id: GO:0016518
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Combining with interleukin-14 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:jl","GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete interleukin-14 receptor activity (obsolete GO:0016518)","synonyms":[{"name":"IL-14 receptor activity","type":"exact"},{"name":"IL-14R","type":"exact"}],"termid":"GO:0016518"}


id: PBO:0120354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRELD disulfide isomerase 2","termid":"PBO:0120354"}


id: PBO:0050491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox B1","termid":"PBO:0050491"}


id: GO:0034331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The organization process that preserves a cell junction in a stable functional or structural state. A cell junction is a specialized region of connection between two cells or between a cell and the extracellular matrix.","definition_xrefs":["GOC:dph","GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell junction organization","termid":"GO:0034330"},{"relation_name":"is_a","term_name":"cellular component maintenance","termid":"GO:0043954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell junction maintenance","termid":"GO:0034331"}


id: GO:0015436
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + capsular polysaccharide(in) = ADP + phosphate + capsular polysaccharide(out).","definition_xrefs":["EC:7.6.2.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATPase-coupled carboxylic acid transmembrane transporter activity","termid":"GO:0033284"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"ABC-type capsular-polysaccharide transporter activity","secondary_identifiers":["MetaCyc:3.6.3.38-RXN"],"synonyms":[{"name":"ATP phosphohydrolase (capsular-polysaccharide-exporting)","type":"related"},{"name":"ATP-dependent capsular-polysaccharide transporter activity","type":"exact"},{"name":"ATPase-coupled capsular-polysaccharide transporter activity","type":"related"},{"name":"capsular-polysaccharide ABC transporter","type":"narrow"},{"name":"capsular-polysaccharide-transporting ATPase activity","type":"exact"}],"termid":"GO:0015436"}


id: PBO:0002055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Arginine","termid":"PBO:0002055"}


id: PBO:0050346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 49","termid":"PBO:0050346"}


id: GO:0007589
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of a fluid by a cell or tissue in an animal.","definition_xrefs":["GOC:tb","GOC:dph","GOC:mah","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretion","termid":"GO:0046903"},{"relation_name":"is_a","term_name":"regulation of body fluid levels","termid":"GO:0050878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"body fluid secretion","termid":"GO:0007589"}


id: PBO:0040156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acid sensing ion channel subunit 2","termid":"PBO:0040156"}


id: GO:0060291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that modulates synaptic plasticity such that synapses are changed resulting in the increase in the rate, or frequency of synaptic transmission at the synapse.","definition_xrefs":["GOC:dph","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synaptic plasticity","termid":"GO:0048167"},{"relation_name":"is_a","term_name":"positive regulation of synaptic transmission","termid":"GO:0050806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"long-term synaptic potentiation","synonyms":[{"name":"LTP","type":"related"},{"name":"long-term potentiation","type":"broad"}],"termid":"GO:0060291"}


id: PBO:0005658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S28, Rps2802","termid":"PBO:0005658"}


id: FYPO:0004730
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found at the lateral cell cortex is observed there. The lateral cell cortex is the region directly beneath the plasma membrane of the lateral portion of the cell.","definition_xrefs":["PomBase:mah","GO:0097575"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm during vegetative growth","termid":"FYPO:0000783"},{"relation_name":"output_of","term_name":"abnormal protein localization to lateral cell cortex","termid":"FYPO:0007869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"protein mislocalized to lateral cell cortex","synonyms":[{"name":"ectopic protein localization to lateral cell cortex","type":"exact"},{"name":"protein mislocalised to lateral cell cortex","type":"exact"},{"name":"protein mislocalised to lateral cell cortex during vegetative growth","type":"exact"},{"name":"protein mislocalized to cell side during vegetative growth","type":"related"},{"name":"protein mislocalized to lateral cell cortex during mitotic cell cycle","type":"related"},{"name":"protein mislocalized to lateral cell cortex during vegetative growth","type":"exact"},{"name":"protein mislocalized to lateral cortex","type":"exact"}],"termid":"FYPO:0004730"}


id: GO:0099583
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Any neurotransmitter receptor activity that is involved in regulating the concentration of calcium in the postsynaptic cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic neurotransmitter receptor activity","termid":"GO:0098960"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"neurotransmitter receptor activity involved in regulation of postsynaptic cytosolic calcium ion concentration","synonyms":[{"name":"neurotransmitter receptor activity involved in regulation of postsynaptic cytosolic calcium levels","type":"exact"}],"termid":"GO:0099583"}


id: MONDO:1012366
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"melanoblastoma, non-human animal","termid":"MONDO:1011814"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanoblastoma, pig","secondary_identifiers":["OMIA:001324-9823"],"termid":"MONDO:1012366","xrefs":{"Monarch":{"xref_id":"1012366"}}}


id: PBO:0070057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 14, pseudogene","termid":"PBO:0070057"}


id: GO:0051977
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of phospholipids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. A lysophospholipid is a phospholipid that lacks one of its fatty acyl chains; it is an intermediate formed during digestion of dietary and biliary phospholipids.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transport","termid":"GO:0015914"},{"relation_name":"is_a","term_name":"carbohydrate derivative transport","termid":"GO:1901264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"lysophospholipid transport","termid":"GO:0051977"}


id: MONDO:0008404
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Scalp-ear-nipple syndrome is characterized by the following triad: areas of hairless raw skin over the scalp (present at birth and healing during childhood), prominent, hypoplastic ears with almost absent pinnae, and bilateral amastia. Thirty cases have been described so far. Renal and urinary tract abnormalities, as well as cataract, have also been observed. Transmission is autosomal dominant.","definition_xrefs":["Orphanet:2036"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"},{"relation_name":"is_a","term_name":"mixed dermis disorder","termid":"MONDO:0019294"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"scalp-ear-nipple syndrome","secondary_identifiers":["UMLS:C1867020","MEDGEN:357183","MESH:C536623","OMIM:181270","SCTID:721888002","GARD:159","DOID:0111550","icd11.foundation:88843032"],"synonyms":[{"name":"Finlay-Marks syndrome","type":"exact"},{"name":"SENS","type":"related"},{"name":"Sen syndrome","type":"related"},{"name":"hereditary syndrome of lumpy scalp, odd ears and rudimentary nipples","type":"related"},{"name":"scalp ear nipple syndrome","type":"related"},{"name":"scalp-EAR-nipple syndrome","type":"related"},{"name":"scalp-ear-nipple syndrome","type":"exact"}],"termid":"MONDO:0008404","xrefs":{"Monarch":{"xref_id":"0008404"}}}


id: GO:0160161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of propanediol catabolic process.","definition_xrefs":["PMID:7559322","PMID:9023178"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of alcohol catabolic process","termid":"GO:1900421"},{"relation_name":"positively_regulates","term_name":"1,2-propanediol catabolic process","termid":"GO:0051144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of propanediol catabolic process","termid":"GO:0160161"}


id: GO:0086057
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a calcium ion by a voltage-gated channel across the plasma membrane of a bundle of His cardiac muscle cell that contributes to the depolarization phase of an action potential. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated calcium channel activity involved in cardiac muscle cell action potential","termid":"GO:0086007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"voltage-gated calcium channel activity involved in bundle of His cell action potential","synonyms":[{"name":"voltage-gated calcium channel activity involved in bundle of His cardiac muscle cell action potential","type":"exact"}],"termid":"GO:0086057"}


id: GO:0004711
data:
  {"annotated_genes":["SJAG_01047"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[118999],"is_not":false,"summary":null,"term":"GO:0004711"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ribosomal protein S6 + ATP = ribosomal protein S6 phosphate + ATP.","definition_xrefs":["PMID:9822608","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01047":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0004672","GO:0016301","GO:0003674","GO:0140096","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"ribosomal protein S6 kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0004711","terms_by_termid":{"GO:0004711":null}}


id: MONDO:0859211
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with hyperkinetic movements and dyskinesia","secondary_identifiers":["MEDGEN:1794248","UMLS:C5562038","OMIM:619651"],"termid":"MONDO:0859211","xrefs":{"Monarch":{"xref_id":"0859211"}}}


id: FYPO:0001683
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which mitotic spindle assembly does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"mitotic spindle absent from cell","termid":"FYPO:0002018"},{"relation_name":"is_a","term_name":"abnormal mitotic spindle assembly","termid":"FYPO:0000177"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0000337","FYPO:0000054","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000641"],"is_obsolete":false,"name":"abolished mitotic spindle assembly","synonyms":[{"name":"abolished mitotic spindle assembly during vegetative growth","type":"exact"},{"name":"abolished spindle assembly during mitotic cell cycle","type":"related"},{"name":"spindle assembly involved in mitosis abolished","type":"exact"}],"termid":"FYPO:0001683"}


id: GO:0000061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A protein complex disassembly process that contributes to protein import into the nucleus, and that results in the dissociation of the cargo protein and the carrier (such as an importin alpha/beta heterodimer) from each other and from the nuclear pore complex.","definition_xrefs":["PMID:9126736","PMID:14570049","GOC:mah","PMID:9687515"],"gene_count":0,"genotype_count":0,"name":"obsolete protein import into nucleus, substrate release (obsolete GO:0000061)","synonyms":[{"name":"protein import into cell nucleus, substrate release","type":"exact"},{"name":"protein substrate release during protein import into nucleus","type":"exact"},{"name":"protein substrate release during protein transport from cytoplasm to nucleus","type":"exact"},{"name":"protein substrate release during protein-nucleus import","type":"exact"},{"name":"protein transport from cytoplasm to nucleus, substrate release","type":"exact"},{"name":"protein-nucleus import, substrate release","type":"exact"}],"termid":"GO:0000061"}


id: PBO:0056178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAFA antisense RNA 1","termid":"PBO:0056178"}


id: PBO:0063319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCNA clamp associated factor","termid":"PBO:0063319"}


id: GO:0046946
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving hydroxylysine (5-hydroxy-2,6-diaminohexanoic acid), a chiral alpha-amino acid. Hydroxylysine is found in collagen and commonly has galactose and then glucose added sequentially by glycosyltransferases.","definition_xrefs":["ISBN:0198506732","PubChem_Compound:1029"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"aspartate family amino acid metabolic process","termid":"GO:0009066"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"hydroxylysine metabolic process","synonyms":[{"name":"hydroxylysine metabolism","type":"exact"}],"termid":"GO:0046946"}


id: PBO:0026792
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_enfumafungin","termid":"PBO:0026792"}


id: GO:0016304
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A heterodimeric phosphoinositide 3-kinase which can phosphorylate phosphatidylinositol, phosphatidylinositol-4-phosphate or phosphatidylinositol-4,5-bisphosphate. Also possesses intrinsic protein kinase activity.","definition_xrefs":["PMID:9759495"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphatidylinositol 3-kinase activity, class I (obsolete GO:0016304)","synonyms":[{"name":"phosphatidylinositol 3-kinase activity, class I","type":"exact"}],"termid":"GO:0016304"}


id: GO:0010118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of opening or closing of stomata, which is directly related to the stomatal conductance (measuring rate of passage of either water vapor or carbon dioxide (CO2) through stomata).","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stomatal movement","termid":"GO:0010118"}


id: MONDO:0001455
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral retinal degeneration","termid":"MONDO:0001451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"retinal lattice degeneration","secondary_identifiers":["UMLS:C0154856","ICD9:362.63","DOID:12165","MEDGEN:102321","SCTID:3577000","ICD10CM:H35.41"],"synonyms":[{"name":"palisade degeneration of retina","type":"exact"}],"termid":"MONDO:0001455","xrefs":{"Monarch":{"xref_id":"0001455"}}}


id: PBO:0086919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative zinc finger protein; YPR013C is not an essential gene","termid":"PBO:0086919"}


id: PBO:0072053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 23","termid":"PBO:0072053"}


id: PBO:0042241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine receptor 4","termid":"PBO:0042241"}


id: PATO:0000721
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000721 absolute yield value (obsolete PATO:0000721)","termid":"PATO:0000721"}


id: PBO:0017411
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-agent_in","termid":"PBO:0017411"}


id: PBO:0077522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 237","termid":"PBO:0077522"}


id: GO:0032460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of protein oligomerization.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of protein oligomerization","termid":"GO:0032459"},{"relation_name":"negatively_regulates","term_name":"protein complex oligomerization","termid":"GO:0051259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"negative regulation of protein oligomerization","synonyms":[{"name":"down regulation of protein oligomerization","type":"exact"},{"name":"down-regulation of protein oligomerization","type":"exact"},{"name":"downregulation of protein oligomerization","type":"exact"},{"name":"inhibition of protein oligomerization","type":"narrow"}],"termid":"GO:0032460"}


id: PBO:0077622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymosin beta 15A","termid":"PBO:0077622"}


id: MONDO:0045022
data:
  {"annotated_genes":["SJAG_04149","SJAG_01199","SJAG_03659","SJAG_01063","SJAG_01147","SJAG_04449","SJAG_03222","SJAG_01924","SJAG_03290","SJAG_03457","SJAG_01061","SJAG_03293","SJAG_03275","SJAG_03553","SJAG_04499","SJAG_01903","SJAG_03861","SJAG_00839","SJAG_00866","SJAG_03712","SJAG_03247","SJAG_03069","SJAG_03434","SJAG_02901","SJAG_01471","SJAG_01164","SJAG_02313","SJAG_04042","SJAG_02388","SJAG_00212","SJAG_00461","SJAG_01466","SJAG_03098","SJAG_02009","SJAG_04495","SJAG_01070","SJAG_02433","SJAG_02369","SJAG_03064","SJAG_00605","SJAG_04425","SJAG_04459","SJAG_01417","SJAG_02235","SJAG_03660","SJAG_02006","SJAG_02791","SJAG_00516","SJAG_04192","SJAG_03671","SJAG_02895","SJAG_02158","SJAG_00660","SJAG_02271","SJAG_00120","SJAG_04334","SJAG_04016","SJAG_00674","SJAG_00944","SJAG_02107","SJAG_03701","SJAG_02397","SJAG_03556","SJAG_00582","SJAG_02007","SJAG_02306","SJAG_03310","SJAG_02796","SJAG_00495","SJAG_03641"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87757],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011614"},{"annotations":[87500],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009603"},{"annotations":[87416],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100255"},{"annotations":[89047,89048],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009053"},{"annotations":[86784,86785],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014702"},{"annotations":[88891],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018163"},{"annotations":[86946],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013051"},{"annotations":[88609],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0027462"},{"annotations":[88608],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0027451"},{"annotations":[88875,88874],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011534"},{"annotations":[87110],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009352"},{"annotations":[87779,87780],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014706"},{"annotations":[86806],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009058"},{"annotations":[87233],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012994"},{"annotations":[86828],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007495"},{"annotations":[88824],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015003"},{"annotations":[88468],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013166"},{"annotations":[86777],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958179"},{"annotations":[88188],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958192"},{"annotations":[86940,86939,86938],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013046"},{"annotations":[89050],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010392"},{"annotations":[87626],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009865"},{"annotations":[87462],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009295"},{"annotations":[87205],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100186"},{"annotations":[87242],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012999"},{"annotations":[87972],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013275"},{"annotations":[88279,88278],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011006"},{"annotations":[88067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009666"},{"annotations":[87055,87054],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009353"},{"annotations":[88281,88280],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011236"},{"annotations":[87228,87229],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009388"},{"annotations":[88715],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013404"},{"annotations":[88531],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009400"},{"annotations":[88489],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009401"},{"annotations":[87303],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100058"},{"annotations":[88439],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013762"},{"annotations":[87226],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014576"},{"annotations":[86905],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014057"},{"annotations":[89082],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014674"},{"annotations":[86923,86924],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007453"},{"annotations":[87755],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009607"},{"annotations":[87031,87032],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009354"},{"annotations":[87642],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009609"},{"annotations":[88473],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010184"},{"annotations":[87949],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013877"},{"annotations":[86927],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011582"},{"annotations":[88648],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0975806"},{"annotations":[87454],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013675"},{"annotations":[87810],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014132"},{"annotations":[87075],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014611"},{"annotations":[87141],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033282"},{"annotations":[87783],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054785"},{"annotations":[88134],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957382"},{"annotations":[88803],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0971174"},{"annotations":[87262],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009736"},{"annotations":[88680],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014466"},{"annotations":[88254,88255],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009340"},{"annotations":[88873],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009796"},{"annotations":[88200,88201],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100165"},{"annotations":[88722],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011152"},{"annotations":[88313],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012596"},{"annotations":[87725],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013531"},{"annotations":[88228],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010717"},{"annotations":[87709],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013580"},{"annotations":[88570],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009502"},{"annotations":[86994],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009529"},{"annotations":[88571],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009503"},{"annotations":[88226],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012120"},{"annotations":[87383],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009950"},{"annotations":[88994],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007067"},{"annotations":[87583],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014803"},{"annotations":[86975,86974],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010083"},{"annotations":[87575],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014221"},{"annotations":[87386],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010208"}]},"cv_name":"mondo","definition":"A disease that has its basis in the disruption of organic acid metabolic process.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease","termid":"MONDO:0005066"}],"gene_count":70,"genes_by_uniquename":{"SJAG_00120":null,"SJAG_00212":null,"SJAG_00461":null,"SJAG_00495":null,"SJAG_00516":null,"SJAG_00582":null,"SJAG_00605":null,"SJAG_00660":null,"SJAG_00674":null,"SJAG_00839":null,"SJAG_00866":null,"SJAG_00944":null,"SJAG_01061":null,"SJAG_01063":null,"SJAG_01070":null,"SJAG_01147":null,"SJAG_01164":null,"SJAG_01199":null,"SJAG_01417":null,"SJAG_01466":null,"SJAG_01471":null,"SJAG_01903":null,"SJAG_01924":null,"SJAG_02006":null,"SJAG_02007":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02158":null,"SJAG_02235":null,"SJAG_02271":null,"SJAG_02306":null,"SJAG_02313":null,"SJAG_02369":null,"SJAG_02388":null,"SJAG_02397":null,"SJAG_02433":null,"SJAG_02791":null,"SJAG_02796":null,"SJAG_02895":null,"SJAG_02901":null,"SJAG_03064":null,"SJAG_03069":null,"SJAG_03098":null,"SJAG_03222":null,"SJAG_03247":null,"SJAG_03275":null,"SJAG_03290":null,"SJAG_03293":null,"SJAG_03310":null,"SJAG_03434":null,"SJAG_03457":null,"SJAG_03553":null,"SJAG_03556":null,"SJAG_03641":null,"SJAG_03659":null,"SJAG_03660":null,"SJAG_03671":null,"SJAG_03701":null,"SJAG_03712":null,"SJAG_03861":null,"SJAG_04016":null,"SJAG_04042":null,"SJAG_04149":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04425":null,"SJAG_04449":null,"SJAG_04459":null,"SJAG_04495":null,"SJAG_04499":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"disorder of organic acid metabolism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:2100161","ICD9:277.89","UMLS:C1263739","SCTID:116021002","MEDGEN:468982"],"synonyms":[{"name":"disorder of organic acid metabolic process","type":"exact"},{"name":"disorder of organic acid metabolism","type":"exact"},{"name":"organic acid metabolic process disease","type":"exact"},{"name":"organic acid metabolism disorder","type":"exact"}],"termid":"MONDO:0045022","terms_by_termid":{"MONDO:0007067":null,"MONDO:0007453":null,"MONDO:0007495":null,"MONDO:0009053":null,"MONDO:0009058":null,"MONDO:0009295":null,"MONDO:0009340":null,"MONDO:0009352":null,"MONDO:0009353":null,"MONDO:0009354":null,"MONDO:0009388":null,"MONDO:0009400":null,"MONDO:0009401":null,"MONDO:0009502":null,"MONDO:0009503":null,"MONDO:0009529":null,"MONDO:0009603":null,"MONDO:0009607":null,"MONDO:0009609":null,"MONDO:0009666":null,"MONDO:0009736":null,"MONDO:0009796":null,"MONDO:0009865":null,"MONDO:0009950":null,"MONDO:0010083":null,"MONDO:0010184":null,"MONDO:0010208":null,"MONDO:0010392":null,"MONDO:0010717":null,"MONDO:0011006":null,"MONDO:0011152":null,"MONDO:0011236":null,"MONDO:0011534":null,"MONDO:0011582":null,"MONDO:0011614":null,"MONDO:0012120":null,"MONDO:0012596":null,"MONDO:0012994":null,"MONDO:0012999":null,"MONDO:0013046":null,"MONDO:0013051":null,"MONDO:0013166":null,"MONDO:0013275":null,"MONDO:0013404":null,"MONDO:0013531":null,"MONDO:0013580":null,"MONDO:0013675":null,"MONDO:0013762":null,"MONDO:0013877":null,"MONDO:0014057":null,"MONDO:0014132":null,"MONDO:0014221":null,"MONDO:0014466":null,"MONDO:0014576":null,"MONDO:0014611":null,"MONDO:0014674":null,"MONDO:0014702":null,"MONDO:0014706":null,"MONDO:0014803":null,"MONDO:0015003":null,"MONDO:0018163":null,"MONDO:0027451":null,"MONDO:0027462":null,"MONDO:0033282":null,"MONDO:0054785":null,"MONDO:0100058":null,"MONDO:0100165":null,"MONDO:0100186":null,"MONDO:0100255":null,"MONDO:0957382":null,"MONDO:0958179":null,"MONDO:0958192":null,"MONDO:0971174":null,"MONDO:0975806":null},"xrefs":{"Monarch":{"xref_id":"0045022"}}}


id: FYPO:0004756
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype in which regulation of the initiation of DNA-dependent DNA replication is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype","termid":"FYPO:0000145"},{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal regulation of DNA replication initiation","synonyms":[{"name":"abnormal regulation of DNA replication initiation during mitotic cell cycle","type":"related"},{"name":"abnormal regulation of DNA-dependent DNA replication initiation","type":"exact"}],"termid":"FYPO:0004756"}


id: PBO:0073452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SFT2 domain containing 1","termid":"PBO:0073452"}


id: FYPO:0008037
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate of elongation of a transcript initiated from an RNA polymerase II promoter is abnormal.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transcription elongation from RNA polymerase II promoter","termid":"FYPO:0004065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0001320","FYPO:0000002","FYPO:0006551","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased rate of transcription elongation from RNA polymerase II promoter","termid":"FYPO:0008037"}


id: PBO:0058649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6778","termid":"PBO:0058649"}


id: PBO:0083771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential NTPase required for small ribosome subunit synthesis; mediates processing of the 20S pre-rRNA at site D in the cytoplasm but associates only transiently with 43S preribosomes via Rps14p; complex with Rps14 is conserved between humans, yeast, and arches; may be the endonuclease for site D; depletion leads to accumulation of pre-40S ribosomes in 80S-like ribosomes; human TAF9 functionally complements the lethality of the null mutation","termid":"PBO:0083771"}


id: PBO:0080081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 43","termid":"PBO:0080081"}


id: GO:0021606
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the accessory nerve to attain its fully functional state. The spinal branch of this motor nerve innervates the trapezius and the sternocleidomastoid muscles. The cranial branch joins the vagus nerve and innervates the same targets as the vagus nerve.","definition_xrefs":["GOC:jid","ISBN:0838580343","GO_REF:0000021","GOC:dph","GOC:dgh","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve maturation","termid":"GO:0021605"},{"relation_name":"part_of","term_name":"accessory nerve development","termid":"GO:0021565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"accessory nerve maturation","synonyms":[{"name":"CN XI maturation","type":"related"},{"name":"spinal accessory nerve maturation","type":"related"}],"termid":"GO:0021606"}


id: PBO:0067837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 139","termid":"PBO:0067837"}


id: PBO:0032710
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_error-free_translesion_synthesis_of_pyrimidine-pyrimidone_6-4_photoproducts","termid":"PBO:0032710"}


id: GO:0052409
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving cellulose in the cell wall of a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by organism of cell wall cellulose in other organism involved in symbiotic interaction (obsolete GO:0052409)","synonyms":[{"name":"metabolism by organism of cell wall cellulose in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052409"}


id: FYPO:0002027
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell forms an actomyosin contractile ring that is not perpendicular to the long axis of the cell.","definition_xrefs":["PomBase:mah","PMID:8834798"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized actomyosin contractile ring","termid":"FYPO:0001369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0004803","FYPO:0000002","FYPO:0001985","FYPO:0000032","FYPO:0000138","FYPO:0005447","FYPO:0000631","FYPO:0001320"],"is_obsolete":false,"name":"angled actomyosin contractile ring","synonyms":[{"name":"actomyosin contractile ring not orthogonal to long axis of cell","type":"exact"},{"name":"actomyosin contractile ring not perpendicular to long axis of cell","type":"related"},{"name":"angled actomyosin contractile ring during mitotic cell cycle","type":"related"},{"name":"angled actomyosin contractile ring during vegetative growth","type":"exact"},{"name":"angled cytokinetic contractile ring","type":"exact"},{"name":"angled mitotic contractile ring","type":"exact"},{"name":"tilted actomyosin contractile ring","type":"exact"}],"termid":"FYPO:0002027"}


id: GO:0030096
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex, located in the membrane-derived thylakoid, containing the P680 reaction center. In the light, PSII functions as a water-plastoquinone oxidoreductase, transferring electrons from water to plastoquinone.","definition_xrefs":["GOC:jid","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photosystem II","termid":"GO:0009523"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"},{"relation_name":"part_of","term_name":"bacterial thylakoid","termid":"GO:0030075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"plasma membrane-derived thylakoid photosystem II","synonyms":[{"name":"plasma membrane photosystem II","type":"exact"}],"termid":"GO:0030096"}


id: GO:0140227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by serotonin binding to a seratonin receptor on the surface of the target cell, followed by the movement of ions through a channel in the receptor complex. Ends with regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:bhm","PMID:27764665","PMID:25392484"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serotonin receptor signaling pathway","termid":"GO:0007210"},{"relation_name":"is_a","term_name":"ligand-gated ion channel signaling pathway","termid":"GO:1990806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"serotonin-gated cation-selective signaling pathway","synonyms":[{"name":"5-HT-gated cation-selective signaling pathway","type":"exact"},{"name":"5-HT-gated cation-selective signalling pathway","type":"exact"},{"name":"5-hydroxytryptamine-gated cation-selective signaling pathway","type":"exact"},{"name":"5-hydroxytryptamine-gated cation-selective signalling pathway","type":"exact"},{"name":"serotonin-gated cation-selective signalling pathway","type":"exact"}],"termid":"GO:0140227"}


id: PBO:0088759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choline-phosphate cytidylyltransferase Pcy1","termid":"PBO:0088759"}


id: GO:0009346
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Citrate lyase is a multienzyme complex with three constituents: the alpha subunit, citrate-ACP transferase; the beta subunit, citryl-ACP lyase; and the gamma subunit, an acyl-carrier protein which also carries the prosthetic group components. All three subunits are required for citrate lyase enzyme activity. This enzyme has only been found in bacteria.","definition_xrefs":["PMID:32302313"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"ATP-independent citrate lyase complex","secondary_identifiers":["MetaCyc:ACECITLY-CPLX"],"synonyms":[{"name":"citrate lyase complex","type":"broad"},{"name":"citrate synthase complex","type":"broad"}],"termid":"GO:0009346"}


id: PBO:0027258
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_chromatin_at_tRNA_genes","termid":"PBO:0027258"}


id: PBO:0113395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative pyridoxal kinase; a key enzyme involved in pyridoxal 5'-phosphate synthesis, the active form of vitamin B6; required for genome integrity; involved in bud-site selection; localizes to cytosol and peroxisomes; similarity to yeast BUD17 and human pyridoxal kinase (PDXK)","termid":"PBO:0113395"}


id: GO:0170037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of substances from the mitochondrion to the cytosol.","definition_xrefs":["GOC:ew"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial transmembrane transport","termid":"GO:1990542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"export from the mitochondrion","termid":"GO:0170037"}


id: PBO:0063861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piezo type mechanosensitive ion channel component 1","termid":"PBO:0063861"}


id: PBO:0073628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 12","termid":"PBO:0073628"}


id: SO:0000715
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif that is active in RNA sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide_motif","termid":"SO:0000714"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA_motif","synonyms":[{"name":"RNA motif","type":"exact"}],"termid":"SO:0000715"}


id: FYPO:0001916
data:
  {"alleles_by_uniquename":{"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121324],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007701"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell contains one nucleus, is longer than normal, and has a greater length:diameter ratio than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"mononucleate vegetative cell","termid":"FYPO:0000060"},{"relation_name":"has_part","term_name":"elongated vegetative cell","termid":"FYPO:0001122"},{"relation_name":"is_a","term_name":"mononucleate vegetative cell","termid":"FYPO:0000060"},{"relation_name":"is_a","term_name":"elongated vegetative cell","termid":"FYPO:0001122"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04332":null},"genotype_count":1,"genotypes_by_uniquename":{"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"elongated mononucleate vegetative cell","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_04332"],"single_locus_genotype_uniquenames":["cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"elongated mononucleate cell during mitotic cell cycle","type":"related"},{"name":"elongated mononucleate cell during vegetative growth","type":"exact"},{"name":"long mononucleate cell","type":"exact"}],"termid":"FYPO:0001916","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null}}


id: PBO:0056002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 1","termid":"PBO:0056002"}


id: FYPO:0000276
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the mitotic spindle forms with microtubules emanating from only one pole.","definition_xrefs":["PMID:9763447","PMID:11792803","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle","termid":"FYPO:0000338"},{"relation_name":"output_of","term_name":"abolished mitotic spindle midzone assembly","termid":"FYPO:0005344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"output_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000120","FYPO:0005447","FYPO:0002399","FYPO:0000641","FYPO:0000631","FYPO:0000054","FYPO:0001985","FYPO:0000337"],"is_obsolete":false,"name":"monopolar mitotic spindle","synonyms":[{"name":"V-shaped mitotic spindle","type":"related"},{"name":"fan-shaped mitotic spindle","type":"exact"},{"name":"monopolar mitotic spindle during vegetative growth","type":"exact"},{"name":"monopolar spindle during mitosis","type":"exact"},{"name":"monopolar spindle during mitotic cell cycle","type":"exact"},{"name":"spindle defects, monopolar mitotic spindle","type":"exact"},{"name":"spindle defects, monopolar spindle","type":"exact"}],"termid":"FYPO:0000276"}


id: PBO:0072544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 74","termid":"PBO:0072544"}


id: PBO:0046473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELKS/RAB6-interacting/CAST family member 1","termid":"PBO:0046473"}


id: MONDO:0016921
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndrome caused by partial chromosomal duplication","termid":"MONDO:0000762"},{"relation_name":"is_a","term_name":"chromosome 1 disorder","termid":"MONDO:0700008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of chromosome 1","secondary_identifiers":["SCTID:726338000","MEDGEN:1379629","GARD:20842","UMLS:C4518488","Orphanet:262191"],"synonyms":[{"name":"partial duplication of chromosome type 1","type":"exact"},{"name":"partial trisomy of chromosome 1","type":"exact"}],"termid":"MONDO:0016921","xrefs":{"Monarch":{"xref_id":"0016921"}}}


id: GO:0071176
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of the intracellular domain of Notch2 (ICN2), the DNA-binding transcription factor RBP-Jkappa, and the transcriptional coactivator Mastermind-like-2 (MAML2); the complex is involved in transcriptional activation in response to Notch-mediated signaling.","definition_xrefs":["PMID:12370315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"MAML2-RBP-Jkappa-ICN2 complex","synonyms":[{"name":"MAML2-RBP-Jkappa-Notch2 complex","type":"exact"}],"termid":"GO:0071176"}


id: FYECO:0000059
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Any experimental condition that specifies one or more chemical(s) that are added to, or excluded from, growth medium, assay buffer, etc.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fission yeast phenotype condition","termid":"FYECO:0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chemical added or excluded","secondary_identifiers":["FYECO:0000017","FYECO:0000019","FYECO:0000020"],"synonyms":[{"name":"chemical added","type":"related"},{"name":"chemicals","type":"related"}],"termid":"FYECO:0000059"}


id: PBO:0044210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin S","termid":"PBO:0044210"}


id: PBO:0048953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOT2 pseudogene 4","termid":"PBO:0048953"}


id: PBO:0052858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 5-1","termid":"PBO:0052858"}


id: PBO:0062743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily H member 2 pseudogene","termid":"PBO:0062743"}


id: PBO:0058924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA let-7c","termid":"PBO:0058924"}


id: MONDO:0032581
data:
  {"annotated_genes":["SJAG_03986","SJAG_01374"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88176,88177],"is_not":false,"summary":null,"term":"MONDO:0032581"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial nephrotic syndrome","termid":"MONDO:0002350"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01374":null,"SJAG_03986":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"nephrotic syndrome, type 18","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4748549","DOID:0080393","MEDGEN:1648464","OMIM:618177","GARD:16300"],"synonyms":[{"name":"NEPHROTIC SYNDROME, TYPE 18","type":"related"},{"name":"NPHS18","type":"related"}],"termid":"MONDO:0032581","terms_by_termid":{"MONDO:0032581":null},"xrefs":{"Monarch":{"xref_id":"0032581"}}}


id: MONDO:0020354
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Coloboma of choroid and retina is a rare, genetic developmental defect during embryogenesis characterized by the partial absence of retinal pigment epithelium and choroid, most frequently located in the inferonasal quadrant. Patients usually present reduced vision and have an increased risk for retinal detachment. Other ocular anomalies (e.g. coloboma of iris, microcornea, nystagmus, strabismus, microphthalmos) are usually associated, however it may also be isolated.","definition_xrefs":["Orphanet:98942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coloboma, ocular, autosomal dominant","termid":"MONDO:0007350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"coloboma of choroid and retina","secondary_identifiers":["UMLS:C4708599","GARD:16875","MEDGEN:1643994","icd11.foundation:20223105","SCTID:39302008"],"synonyms":[{"name":"choroidal coloboma","type":"related"},{"name":"retinal coloboma","type":"related"},{"name":"retinochoroidal coloboma","type":"related"}],"termid":"MONDO:0020354","xrefs":{"Monarch":{"xref_id":"0020354"}}}


id: GO:0033427
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a CAA codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003723","GO:0003674","GO:0005488","GO:0060090"],"is_obsolete":false,"name":"CAA codon-amino acid adaptor activity","synonyms":[{"name":"glutamine tRNA","type":"related"}],"termid":"GO:0033427"}


id: GO:1901171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of naphthalene.","definition_xrefs":["GOC:yaf","GOC:TermGenie","UniPathway:UPA00082"],"gene_count":0,"genotype_count":0,"name":"obsolete naphthalene biosynthetic process (obsolete GO:1901171)","synonyms":[{"name":"naphthalene anabolism","type":"exact"},{"name":"naphthalene biosynthesis","type":"exact"},{"name":"naphthalene formation","type":"exact"},{"name":"naphthalene synthesis","type":"exact"}],"termid":"GO:1901171"}


id: PBO:0081926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 968, pseudogene","termid":"PBO:0081926"}


id: MONDO:0019766
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Renpenning syndrome","termid":"MONDO:0010653"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked intellectual disability, Porteous type","secondary_identifiers":["GARD:19239","Orphanet:93945","UMLS:C5681616","MEDGEN:1842708"],"termid":"MONDO:0019766","xrefs":{"Monarch":{"xref_id":"0019766"}}}


id: FYPO:0000375
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which programmed cell death by apoptosis does not occur. Apoptosis is a form of cell death characterized by rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), plasma membrane blebbing and fragmentation of the cell into apoptotic bodies.","definition_xrefs":["PomBase:mah","GO:0006915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal apoptotic process","termid":"FYPO:0000629"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished apoptotic process","synonyms":[{"name":"abolished apoptosis","type":"narrow"},{"name":"absent apoptotic process","type":"exact"},{"name":"apoptosis: absent","type":"related"},{"name":"apoptotic process abolished","type":"exact"}],"termid":"FYPO:0000375"}


id: PBO:0049884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HERC2 pseudogene 3","termid":"PBO:0049884"}


id: PBO:0005516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF2B alpha subunit (predicted)","termid":"PBO:0005516"}


id: PBO:0117009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITPR2 antisense RNA 2","termid":"PBO:0117009"}


id: GO:1905690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of a nucleus into its constituent components.","definition_xrefs":["GOC:TermGenie","GOC:autophagy","GO_REF:0000079","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus organization","termid":"GO:0006997"},{"relation_name":"is_a","term_name":"organelle disassembly","termid":"GO:1903008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nucleus disassembly","synonyms":[{"name":"cell nucleus disassembly","type":"exact"}],"termid":"GO:1905690"}


id: PBO:0079561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBA like domain containing 2","termid":"PBO:0079561"}


id: GO:1903662
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving L-altrarate.","definition_xrefs":["PMID:17649980","GO_REF:0000068","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate metabolic process","termid":"GO:0005975"},{"relation_name":"is_a","term_name":"aldaric acid metabolic process","termid":"GO:0019577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"L-altrarate metabolic process","synonyms":[{"name":"L-altrarate(1-) metabolism","type":"exact"}],"termid":"GO:1903662"}


id: PBO:0053371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 294","termid":"PBO:0053371"}


id: PBO:0039509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 29","termid":"PBO:0039509"}


id: GO:0045461
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sterigmatocystin, a carcinogenic mycotoxin produced in high yields by strains of the common molds.","definition_xrefs":["PMID:10618248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxin biosynthetic process","termid":"GO:0009403"},{"relation_name":"is_a","term_name":"sterigmatocystin metabolic process","termid":"GO:0045460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"sterigmatocystin biosynthetic process","synonyms":[{"name":"sterigmatocystin anabolism","type":"exact"},{"name":"sterigmatocystin biosynthesis","type":"exact"},{"name":"sterigmatocystin formation","type":"exact"},{"name":"sterigmatocystin synthesis","type":"exact"}],"termid":"GO:0045461"}


id: GO:0120332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process involved in maintaining the steady-state number of cells within a population of free-living cells, such as the bacteria, in the mouth.","definition_xrefs":["PMID:31882545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homeostasis of number of cells","termid":"GO:0048872"},{"relation_name":"is_a","term_name":"host-mediated perturbation of symbiont process","termid":"GO:0051851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"host-mediated modulation of oral microbiota composition","synonyms":[{"name":"host-induced regulation of oral microbiota composition","type":"related"},{"name":"host-mediated regulation of oral microbiota composition","type":"exact"}],"termid":"GO:0120332"}


id: MONDO:0018758
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Familial patent arterial duct is a rare, genetic, non-syndromic, congenital anomaly of the great arteries characterized by the presence of an isolated patent arterial duct (PDA) (i.e. failure of closure of ductus arteriosis after birth) in several members of the same family. Clinical presentation is similar to the sporadic form and may range from neonatal-onset tachypnea, diaphoresis and failure to thrive to adult-onset atrial arrhythmia, signs and symptoms of heart failure and cyanosis limited to the lower extremities.","definition_xrefs":["Orphanet:466729"],"gene_count":0,"genotype_count":0,"name":"obsolete familial patent arterial duct (obsolete MONDO:0018758)","termid":"MONDO:0018758","xrefs":{"Monarch":{"xref_id":"0018758"}}}


id: PBO:0069204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 458, pseudogene","termid":"PBO:0069204"}


id: MONDO:0013123
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any atrial heart septal defect in which the cause of the disease is a mutation in the TLL1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrial septal defect","termid":"MONDO:0006664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"atrial septal defect 6","secondary_identifiers":["MESH:C567764","DOID:0110111","MEDGEN:414348","OMIM:613087","UMLS:C2751315"],"synonyms":[{"name":"ASD6","type":"exact"},{"name":"TLL1 atrial heart septal defect","type":"exact"},{"name":"atrial heart septal defect caused by mutation in TLL1","type":"exact"},{"name":"atrial heart septal defect type 6","type":"exact"},{"name":"atrial septal defect 6","type":"exact"},{"name":"atrial septal defect type 6","type":"exact"}],"termid":"MONDO:0013123","xrefs":{"Monarch":{"xref_id":"0013123"}}}


id: PR:Q9UR21
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC24B11.14 gene.","definition_xrefs":["UniProtKB:Q9UR21","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C24B11.14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24B11.14","synonyms":[{"name":"Spom972h-SPAC24B11.14","type":"exact"}],"termid":"PR:Q9UR21"}


id: GO:0055053
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: mannose + H+ = mannose + H+.","definition_xrefs":["GOC:ct"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose:proton symporter activity","termid":"GO:0009679"},{"relation_name":"is_a","term_name":"mannose transmembrane transporter activity","termid":"GO:0015578"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"mannose:proton symporter activity","synonyms":[{"name":"mannose:hydrogen symporter activity","type":"exact"}],"termid":"GO:0055053"}


id: GO:0140252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein at the postsynapse.","definition_xrefs":["PMID:17062563"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation protein catabolic process at synapse","termid":"GO:0140250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation protein catabolic process at postsynapse","termid":"GO:0140252"}


id: PBO:0061285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore associated protein 1 pseudogene 6","termid":"PBO:0061285"}


id: PBO:0053154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactate dehydrogenase B pseudogene 3","termid":"PBO:0053154"}


id: MOD:00044
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-histidine residue to tele-phospho-L-histidine (N-tau-phospho-L-histidine, 1'-phospho-L-histidine).","definition_xrefs":["RESID:AA0035","PubMed:6692818","PubMed:11038361","PubMed:5642389"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorylated L-histidine","termid":"MOD:00890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00696"}],"interesting_parent_ids":["MOD:00696"],"is_obsolete":false,"name":"1'-phospho-L-histidine","synonyms":[{"name":"(2S)-2-amino-3-(1-phosphono-1H-imidazol-4-yl)propanoic acid","type":"exact"},{"name":"1'-phospho-L-histidine","type":"exact"},{"name":"2-azanyl-3-(1-phosphono-1H-imidazol-4-yl)propanoic acid","type":"exact"},{"name":"ACT_SITE Tele-phosphohistidine intermediate","type":"exact"},{"name":"MOD_RES Tele-phosphohistidine","type":"exact"},{"name":"N(tau)-phosphohistidine","type":"exact"},{"name":"N1-phosphonohistidine","type":"exact"},{"name":"NE2-phosphonohistidine","type":"exact"},{"name":"NtPHis","type":"exact"},{"name":"Ntau-phosphorylated L-histidine","type":"exact"},{"name":"Phospho","type":"related"},{"name":"Phosphorylation","type":"related"},{"name":"histidine-3-phosphate","type":"related"},{"name":"histidine-N(epsilon)-phosphate","type":"exact"},{"name":"histidine-N1'-phosphate","type":"exact"},{"name":"tele-phosphohistidine","type":"exact"}],"termid":"MOD:00044"}


id: PR:Q9P374
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC19B12.07c gene.","definition_xrefs":["UniProtKB:Q9P374","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein C19B12.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19B12.07c","synonyms":[{"name":"Spom972h-SPAC19B12.07c","type":"exact"}],"termid":"PR:Q9P374"}


id: PBO:0029652
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_histidine","termid":"PBO:0029652"}


id: GO:0045657
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of monocyte differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of myeloid leukocyte differentiation","termid":"GO:0002763"},{"relation_name":"is_a","term_name":"regulation of monocyte differentiation","termid":"GO:0045655"},{"relation_name":"positively_regulates","term_name":"monocyte differentiation","termid":"GO:0030224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of monocyte differentiation","synonyms":[{"name":"activation of monocyte differentiation","type":"narrow"},{"name":"stimulation of monocyte differentiation","type":"narrow"},{"name":"up regulation of monocyte differentiation","type":"exact"},{"name":"up-regulation of monocyte differentiation","type":"exact"},{"name":"upregulation of monocyte differentiation","type":"exact"}],"termid":"GO:0045657"}


id: PBO:0084323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Karyopherin beta; responsible for import of the Toa1p-Toa2p complex into the nucleus; binds to nucleoporins Nup1p and Nup2p; may play a role in regulation of pleiotropic drug resistance","termid":"PBO:0084323"}


id: GO:0106376
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-hydroxyphytanoyl-CoA = 2,6,10,14-tetramethylpentadecanal + formyl-CoA.","definition_xrefs":["RHEA:25355","PMID:10468558"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-hydroxyacyl-CoA lyase activity","termid":"GO:0106359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"2-hydroxyphytanoyl-CoA lyase activity","termid":"GO:0106376"}


id: MONDO:0018431
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete autosomal recessive hereditary sensory and autonomic neuropathy (obsolete MONDO:0015366)","termid":"MONDO:0015366"},{"relation_name":"is_a","term_name":"hereditary sensory and autonomic neuropathy","termid":"MONDO:0015364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"cold-induced sweating syndrome - hyperthermia spectrum","secondary_identifiers":["GARD:21708","MEDGEN:1842440","Orphanet:401993","UMLS:C5681139"],"termid":"MONDO:0018431","xrefs":{"Monarch":{"xref_id":"0018431"}}}


id: PR:O75004
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cdc24 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O75004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division control protein 24 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8F11.07c","synonyms":[{"name":"Spom972h-cdc24","type":"exact"}],"termid":"PR:O75004"}


id: MONDO:0958329
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"Jeffries-Lakhani neurodevelopmental syndrome","secondary_identifiers":["MEDGEN:1854360","OMIM:620771","UMLS:C5935596"],"termid":"MONDO:0958329","xrefs":{"Monarch":{"xref_id":"0958329"}}}


id: FYECO:0000201
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in rich medium containing peptone, yeast extract and other components. The concentration of glucose is typically around 2-3%. Note that peptone, which is a mixture of nutrients generated by proteolytic digestion of animal protein with trypsin, is not normally a component of S. pombe rich media (it is however normally present in S. cerevisiae rich media).","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping rich medium","termid":"FYECO:0000080"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YPD","synonyms":[{"name":"glucose rich medium, peptone/YE nitrogen source","type":"broad"}],"termid":"FYECO:0000201"}


id: PBO:0075059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-22","termid":"PBO:0075059"}


id: PBO:0043949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin beta B1","termid":"PBO:0043949"}


id: PATO:0001501
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's lacking complete growth, differentiation, or development.","definition_xrefs":["Merriam-Webster:Merriam-Webster"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturity","termid":"PATO:0000261"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immature","synonyms":[{"name":"underdeveloped","type":"related"}],"termid":"PATO:0001501"}


id: GO:0060477
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The phosphorylation of peptidyl-serine to form peptidyl-O-phospho-L-serine that is part of the acrosome reaction.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-serine phosphorylation involved in acrosome reaction (obsolete GO:0060477)","termid":"GO:0060477"}


id: PBO:0066008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RALGPS2 antisense RNA 1","termid":"PBO:0066008"}


id: PBO:0073477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sarcoglycan zeta","termid":"PBO:0073477"}


id: GO:0061699
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The removal of a glutaryl group (CO-CH2-CH2--CH2-CO) from a glutarylated lysine residue in a peptide or protein.","definition_xrefs":["GOC:dph","PMID:24703693"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-lysine deglutarylation (obsolete GO:0061699)","termid":"GO:0061699"}


