# terms

id: PBO:0082359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Autophagy receptor with a role in endoplasmic reticulum degradation; involved specifically in autophagy of cortical and cytoplasmic ER in response to nitrogen starvation or rapamycin treatment; acts with COPII subunit Sfb3p; localizes to the cortical and cytoplasmic ER; similar to human FAM134B, which is also involved in ER autophagy and is associated with sensory neuropathy","termid":"PBO:0082359"}


id: GO:0033661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process mediated by a molecule secreted by a symbiont that results in the suppression of reactive oxygen species produced by the host as part of its innate immune response. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont defense to host-produced reactive oxygen species","termid":"GO:0052164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"effector-mediated defense to host-produced reactive oxygen species","synonyms":[{"name":"down regulation by organism of defense-related host metabolic burst","type":"exact"},{"name":"down-regulation by organism of defense-related host oxidative burst","type":"exact"},{"name":"downregulation by organism of defense-related host AOS production","type":"exact"},{"name":"negative regulation by organism of defense-related host ROI production","type":"exact"},{"name":"negative regulation by organism of defense-related host ROS production","type":"exact"},{"name":"negative regulation by organism of defense-related host reactive oxidative species production","type":"exact"},{"name":"negative regulation by organism of defense-related host reactive oxygen intermediate production","type":"exact"},{"name":"negative regulation by organism of defense-related host respiratory burst","type":"exact"},{"name":"negative regulation by symbiont of defense-related host reactive oxygen species production","type":"exact"},{"name":"suppression by symbiont of defense-related host reactive oxygen species production","type":"related"}],"termid":"GO:0033661"}


id: PBO:0071342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29","termid":"PBO:0071342"}


id: MONDO:0003685
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A germ cell tumor that involves the retroperitoneal space.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"retroperitoneal cancer","termid":"MONDO:0005941"},{"relation_name":"is_a","term_name":"germ cell tumor","termid":"MONDO:0005040"},{"relation_name":"is_a","term_name":"retroperitoneal neoplasm","termid":"MONDO:0024645"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retroperitoneal germ cell neoplasm","secondary_identifiers":["MEDGEN:233406","UMLS:C1335776","NCIT:C6447","DOID:5874"],"synonyms":[{"name":"germ cell neoplasm of retroperitoneum","type":"exact"},{"name":"germ cell neoplasm of the retroperitoneum","type":"exact"},{"name":"germ cell tumor of retroperitoneum","type":"exact"},{"name":"germ cell tumor of the retroperitoneum","type":"exact"},{"name":"germ cell tumour of retroperitoneum","type":"exact"},{"name":"germ cell tumour of the retroperitoneum","type":"exact"},{"name":"retroperitoneal germ cell tumor","type":"exact"},{"name":"retroperitoneal germ cell tumour","type":"exact"}],"termid":"MONDO:0003685","xrefs":{"Monarch":{"xref_id":"0003685"}}}


id: PBO:0079951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 4","termid":"PBO:0079951"}


id: PR:Q9UUJ3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rga9 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUJ3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rho-GTPase-activating protein 9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1952.16","synonyms":[{"name":"Spom972h-rga9","type":"exact"}],"termid":"PR:Q9UUJ3"}


id: PBO:0056295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated protein 1B","termid":"PBO:0056295"}


id: PBO:0062159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily H member 12 pseudogene","termid":"PBO:0062159"}


id: MONDO:1011854
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thalamic-cerebellar neuropathy, non-human animal","secondary_identifiers":["OMIA:000723"],"termid":"MONDO:1011854","xrefs":{"Monarch":{"xref_id":"1011854"}}}


id: PBO:0000764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingosine N-acyltransferase Lag1","termid":"PBO:0000764"}


id: PBO:0109608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A20","termid":"PBO:0109608"}


id: PBO:0043682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cortistatin","termid":"PBO:0043682"}


id: PBO:0003427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF1A-like (predicted)","termid":"PBO:0003427"}


id: GO:0010254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the floral nectaries over time, from its formation to the mature structure.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"flower development","termid":"GO:0009908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nectary development","termid":"GO:0010254"}


id: GO:0072303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of metanephric glomerular mesangial cell proliferation.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of glomerular mesangial cell proliferation","termid":"GO:0072126"},{"relation_name":"is_a","term_name":"regulation of metanephric glomerular mesangial cell proliferation","termid":"GO:0072301"},{"relation_name":"positively_regulates","term_name":"metanephric glomerular mesangial cell proliferation involved in metanephros development","termid":"GO:0072262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of glomerular metanephric mesangial cell proliferation","termid":"GO:0072303"}


id: PBO:0059116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mov10 like RISC complex RNA helicase 1","termid":"PBO:0059116"}


id: GO:0102272
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: glutathionate + a poly gamma-glutamylcysteine-beta-alanine = glycine + a poly gamma-glutamylcysteine-beta-alanine.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete homophytochelatin synthase activity (polymer-forming) (obsolete GO:0102272)","termid":"GO:0102272"}


id: PBO:0070819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 49","termid":"PBO:0070819"}


id: GO:0030466
data:
  {"annotated_genes":["SJAG_04141","SJAG_02409","SJAG_03916","SJAG_03997","SJAG_02621","SJAG_02778","SJAG_03128","SJAG_04186","SJAG_02401","SJAG_00142","SJAG_00934","SJAG_02119","SJAG_03193","SJAG_01540","SJAG_01601","SJAG_03356","SJAG_03680","SJAG_04574","SJAG_03689","SJAG_00160","SJAG_03042","SJAG_00341","SJAG_02342","SJAG_00266","SJAG_01579","SJAG_02725","SJAG_03844","SJAG_02311","SJAG_00756","SJAG_02592","SJAG_03982"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61312,73401,93086,94568,95894,96162,97338,98545,100942,101381,105915,106014,109816,110001,112336,113063,113127,113965,114067,115154,115531,115849,117286,117846,119563,119848,119965,120698],"is_not":false,"summary":null,"term":"GO:0030466"},{"annotations":[96186,92999,112193],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0090055"}]},"cv_name":"biological_process","definition":"Repression of transcription at silent mating-type loci by alteration of the structure of chromatin.","definition_xrefs":["GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"constitutive heterochromatin formation","termid":"GO:0140719"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00142":null,"SJAG_00160":null,"SJAG_00266":null,"SJAG_00341":null,"SJAG_00756":null,"SJAG_00934":null,"SJAG_01540":null,"SJAG_01579":null,"SJAG_01601":null,"SJAG_02119":null,"SJAG_02311":null,"SJAG_02342":null,"SJAG_02401":null,"SJAG_02409":null,"SJAG_02592":null,"SJAG_02621":null,"SJAG_02725":null,"SJAG_02778":null,"SJAG_03042":null,"SJAG_03128":null,"SJAG_03193":null,"SJAG_03356":null,"SJAG_03680":null,"SJAG_03689":null,"SJAG_03844":null,"SJAG_03916":null,"SJAG_03982":null,"SJAG_03997":null,"SJAG_04141":null,"SJAG_04186":null,"SJAG_04574":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0006325","GO:0010467"],"is_obsolete":false,"name":"silent mating-type cassette heterochromatin formation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0035389","GO:0006347"],"synonyms":[{"name":"aging-dependent sterility","type":"narrow"},{"name":"chromatin silencing at HML and HMR","type":"narrow"},{"name":"chromatin silencing at silent mating-type cassette","type":"exact"},{"name":"establishment of chromatin silencing at silent mating-type cassette","type":"related"},{"name":"heterochromatic silencing at silent mating-type cassette","type":"exact"},{"name":"silent mating-type cassette chromatin silencing","type":"exact"},{"name":"silent mating-type cassette heterochromatin assembly","type":"exact"}],"termid":"GO:0030466","terms_by_termid":{"GO:0030466":null,"GO:0090055":null}}


id: PBO:0041636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CACNA1C intronic transcript 3","termid":"PBO:0041636"}


id: PBO:0077074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIA1 cytotoxic granule associated RNA binding protein like 1","termid":"PBO:0077074"}


id: FYPO:0006236
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain a normal (i.e. indistinguishable from wild type) number of monomeric ribosomes (80S monosomes) in the cytosol.","definition_xrefs":["PMID:18065650","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of macromolecular complex","termid":"FYPO:0006235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal cytosolic monomeric ribosome level","synonyms":[{"name":"cytosolic monomeric ribosomes present at normal level","type":"exact"},{"name":"normal cytosolic 80S monosome level","type":"exact"},{"name":"normal cytosolic monomeric 80S ribosome level","type":"exact"},{"name":"normal cytosolic monomeric ribosome level during mitotic cell cycle","type":"related"},{"name":"normal cytosolic monomeric ribosome level during vegetative growth","type":"exact"},{"name":"normal cytosolic ribosome level","type":"broad"},{"name":"normal level of cytosolic monomeric ribosomes","type":"exact"}],"termid":"FYPO:0006236"}


id: MONDO:0958180
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bradyopsia","termid":"MONDO:0012033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"prolonged electroretinal response suppression 1","secondary_identifiers":["MEDGEN:1840510","OMIM:608415","UMLS:C5829874","DOID:0070363"],"termid":"MONDO:0958180","xrefs":{"Monarch":{"xref_id":"0958180"}}}


id: MONDO:0003506
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare choriocarcinoma that arises from a pulmonary artery.","definition_xrefs":["NCIT:C5381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arterial disorder","termid":"MONDO:0000473"},{"relation_name":"is_a","term_name":"choriocarcinoma","termid":"MONDO:0005207"},{"relation_name":"is_a","term_name":"malignant germ cell tumor","termid":"MONDO:0006290"},{"relation_name":"is_a","term_name":"great vessel cancer","termid":"MONDO:0040676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pulmonary artery choriocarcinoma","secondary_identifiers":["UMLS:C1335571","MEDGEN:233371","DOID:5547"],"synonyms":[{"name":"choriocarcinoma of pulmonary artery","type":"exact"},{"name":"choriocarcinoma of the pulmonary artery","type":"exact"},{"name":"chorioepithelioma of pulmonary artery","type":"exact"},{"name":"chorioepithelioma of the pulmonary artery","type":"exact"},{"name":"pulmonary artery choriocarcinoma","type":"exact"},{"name":"pulmonary artery choriocarcinoma (disease)","type":"exact"},{"name":"pulmonary artery chorioepithelioma","type":"exact"},{"name":"pulmonary artery syncytioma","type":"exact"},{"name":"syncytioma of pulmonary artery","type":"exact"},{"name":"syncytioma of the pulmonary artery","type":"exact"}],"termid":"MONDO:0003506","xrefs":{"Monarch":{"xref_id":"0003506"}}}


id: MONDO:1010990
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hydrocephalus that occurs in llama.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrocephalus, non-human animal","termid":"MONDO:1010233"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrocephalus, llama","secondary_identifiers":["OMIA:000487-9844"],"termid":"MONDO:1010990","xrefs":{"Monarch":{"xref_id":"1010990"}}}


id: GO:1903054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of extracellular matrix organization.","definition_xrefs":["GOC:rl","GOC:TermGenie","GO_REF:0000058","PMID:22357537","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"regulation of extracellular matrix organization","termid":"GO:1903053"},{"relation_name":"negatively_regulates","term_name":"extracellular matrix organization","termid":"GO:0030198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of extracellular matrix organization","synonyms":[{"name":"down regulation of extracellular matrix organisation","type":"exact"},{"name":"down regulation of extracellular matrix organization","type":"exact"},{"name":"down regulation of extracellular matrix organization and biogenesis","type":"related"},{"name":"down-regulation of extracellular matrix organisation","type":"exact"},{"name":"down-regulation of extracellular matrix organization","type":"exact"},{"name":"down-regulation of extracellular matrix organization and biogenesis","type":"related"},{"name":"downregulation of extracellular matrix organisation","type":"exact"},{"name":"downregulation of extracellular matrix organization","type":"exact"},{"name":"downregulation of extracellular matrix organization and biogenesis","type":"related"},{"name":"inhibition of extracellular matrix organisation","type":"narrow"},{"name":"inhibition of extracellular matrix organization","type":"narrow"},{"name":"inhibition of extracellular matrix organization and biogenesis","type":"related"},{"name":"negative regulation of extracellular matrix organisation","type":"exact"},{"name":"negative regulation of extracellular matrix organization and biogenesis","type":"related"}],"termid":"GO:1903054"}


id: PBO:0051327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2-18 (pseudogene)","termid":"PBO:0051327"}


id: MONDO:0025489
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lymphoid neoplastic disease in cattle caused by the bovine leukemia virus. Enzootic bovine leukosis may take the form of lymphosarcoma, malignant lymphoma, or leukemia but the presence of malignant cells in the blood is not a consistent finding.","definition_xrefs":["MESH:D016583"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bovine leukemia","termid":"MONDO:0700135"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enzootic bovine leukosis","synonyms":[{"name":"bovine Leukoses","type":"related"},{"name":"bovine Leukoses, enzootic","type":"related"},{"name":"bovine Lymphomas","type":"related"},{"name":"bovine Lymphosarcomas","type":"related"},{"name":"bovine leukaemia","type":"related"},{"name":"bovine leukemia","type":"related"},{"name":"bovine leukemias","type":"related"},{"name":"bovine leukosis","type":"related"},{"name":"bovine leukosis, enzootic","type":"related"},{"name":"bovine lymphoma","type":"related"},{"name":"bovine lymphosarcoma","type":"related"},{"name":"enzootic bovine Leukoses","type":"related"},{"name":"leukemia, bovine","type":"related"},{"name":"leukemias, bovine","type":"related"},{"name":"leukoses, bovine","type":"related"},{"name":"leukoses, enzootic bovine","type":"related"},{"name":"leukosis, bovine","type":"related"},{"name":"leukosis, enzootic bovine","type":"related"},{"name":"lymphoma, bovine","type":"related"},{"name":"lymphomas, bovine","type":"related"},{"name":"lymphosarcoma, bovine","type":"related"},{"name":"lymphosarcomas, bovine","type":"related"}],"termid":"MONDO:0025489","xrefs":{"Monarch":{"xref_id":"0025489"}}}


id: MONDO:0015800
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This newly described syndrome is characterized by osteosclerosis, developmental delay and craniosynostosis.","definition_xrefs":["Orphanet:178377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic craniosynostosis","termid":"MONDO:0015338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"osteosclerosis-developmental delay-craniosynostosis syndrome","secondary_identifiers":["SCTID:722117000","UMLS:C4302818","GARD:20147","MEDGEN:928487"],"termid":"MONDO:0015800","xrefs":{"Monarch":{"xref_id":"0015800"}}}


id: MOD:00067
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to N-D-glucuronoylglycine.","definition_xrefs":["PubMed:7398618","PubMed:12716131","PubMed:10858503","RESID:AA0058","PubMed:6493057","OMSSA:50"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-glucuronylated residue","termid":"MOD:00447"},{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"N-D-glucuronoylglycine","synonyms":[{"name":"2-(glucuronoylamino)ethanoic acid","type":"exact"},{"name":"Glucuronyl","type":"related"},{"name":"MOD_RES N-D-glucuronoyl glycine","type":"exact"},{"name":"N-D-glucuronoyl-glycine","type":"exact"},{"name":"N-D-glucuronyl-glycine","type":"exact"},{"name":"NGlcAGly","type":"exact"},{"name":"ntermpepglucuronylg","type":"exact"}],"termid":"MOD:00067"}


id: PBO:0080166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"voltage dependent anion channel 1 pseudogene 1","termid":"PBO:0080166"}


id: PBO:0026687
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_carboxypeptidase_activity","termid":"PBO:0026687"}


id: PBO:0073677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIRPG antisense RNA 1","termid":"PBO:0073677"}


id: PBO:0055252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2679","termid":"PBO:0055252"}


id: PBO:0080338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 102 pseudogene","termid":"PBO:0080338"}


id: PBO:0063975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 9","termid":"PBO:0063975"}


id: PBO:0061744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurexophilin 3","termid":"PBO:0061744"}


id: PBO:0048656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gap junction protein epsilon 1","termid":"PBO:0048656"}


id: PBO:0049128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPRC5D and HEBP1 antisense RNA 1","termid":"PBO:0049128"}


id: PBO:0043661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coenzyme Q6, monooxygenase","termid":"PBO:0043661"}


id: GO:0062212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of firing from an early origin of replication involved in mitotic DNA replication.","definition_xrefs":["PMID:22279046"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic DNA replication initiation","termid":"GO:1903466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0006259","GO:0007049","GO:0006260","GO:0008150"],"is_obsolete":false,"name":"regulation of mitotic DNA replication initiation from early origin","synonyms":[{"name":"regulation of early replication origin firing","type":"exact"}],"termid":"GO:0062212"}


id: GO:0071248
data:
  {"annotated_genes":["SJAG_04516","SJAG_01351","SJAG_03497","SJAG_04403","SJAG_00988","SJAG_03631","SJAG_03799","SJAG_04454","SJAG_02599","SJAG_01233","SJAG_02858","SJAG_01344","SJAG_00044","SJAG_03879"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94948],"is_not":false,"summary":null,"term":"GO:0071248"},{"annotations":[95119,98826,110270,120073,72591,98864],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0098849"},{"annotations":[90695],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071276"},{"annotations":[115217,116537,112010,102815,117988,99922],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071277"},{"annotations":[116538],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035865"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a metal ion stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to metal ion","termid":"GO:0010038"},{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00988":null,"SJAG_01233":null,"SJAG_01344":null,"SJAG_01351":null,"SJAG_02599":null,"SJAG_02858":null,"SJAG_03497":null,"SJAG_03631":null,"SJAG_03799":null,"SJAG_03879":null,"SJAG_04403":null,"SJAG_04454":null,"SJAG_04516":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to metal ion","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cellular response to heavy metal","type":"narrow"},{"name":"cellular response to metal","type":"exact"}],"termid":"GO:0071248","terms_by_termid":{"GO:0035865":null,"GO:0071248":null,"GO:0071276":null,"GO:0071277":null,"GO:0098849":null}}


id: PBO:0027735
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_cytoplasm_with_protein_mislocalized_to_nucleolus_during_cellular_response_to_latrunculin_B","termid":"PBO:0027735"}


id: GO:0035566
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the size of a metanephric kidney.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of kidney size","termid":"GO:0035564"},{"relation_name":"part_of","term_name":"metanephros morphogenesis","termid":"GO:0003338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of metanephros size","synonyms":[{"name":"regulation of metanephric kidney size","type":"exact"}],"termid":"GO:0035566"}


id: PBO:0001506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARP2/3 actin-organizing complex subunit Arc5","termid":"PBO:0001506"}


id: PBO:0084407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lysophosphatidic acid (LPA) phosphatase, nucleotidase; principle and physiological nucleotidase working on GMP, UMP and CMP; involved in LPA hydrolysis in response to phosphate starvation and ribose salvage pathway; phosphatase activity is soluble and Mg2+ dependent; expression is induced by low phosphate levels and by inactivation of Pho85p; repressed by Gcn4p under normal conditions; PHM8 has a paralog, SDT1, that arose from the whole genome duplication","termid":"PBO:0084407"}


id: GO:0110028
data:
  {"annotated_genes":["SJAG_02332"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113291],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110161"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitotic spindle organization.","definition_xrefs":["PMID:17576815","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mitotic cell cycle","termid":"GO:0045931"},{"relation_name":"is_a","term_name":"positive regulation of cytoskeleton organization","termid":"GO:0051495"},{"relation_name":"is_a","term_name":"regulation of mitotic spindle organization","termid":"GO:0060236"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"positively_regulates","term_name":"mitotic spindle organization","termid":"GO:0007052"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0000226"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0007010","GO:0007049","GO:0000226","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mitotic spindle organization","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0110028","terms_by_termid":{"GO:0110161":null}}


id: GO:0035355
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex containing Toll-like receptor 2 (TLR2) and Toll-like receptor 6 (TLR6).","definition_xrefs":["PMID:21481769","PMID:19931471","GOC:add","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"Toll-like receptor 2-Toll-like receptor 6 protein complex","secondary_identifiers":["GO:0038126"],"synonyms":[{"name":"TLR2-TLR6 protein complex","type":"exact"},{"name":"TLR2:TLR6 heterodimer","type":"exact"},{"name":"TLR6:TLR2 complex","type":"exact"},{"name":"toll-like receptor TLR6:TLR2 heterodimeric complex","type":"exact"}],"termid":"GO:0035355"}


id: GO:0047687
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: L-ascorbate + H2O + O2 = L-threonate + 2 H+ + oxalate.","definition_xrefs":["EC:1.13.11.13"],"gene_count":0,"genotype_count":0,"name":"obsolete ascorbate 2,3-dioxygenase activity (obsolete GO:0047687)","synonyms":[{"name":"AAoxygenase activity","type":"exact"},{"name":"ascorbate 2,3-dioxygenase activity","type":"exact"},{"name":"ascorbate:oxygen 2,3-oxidoreductase (bond-cleaving)","type":"exact"}],"termid":"GO:0047687"}


id: PBO:0058994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAX dimerization protein MLX","termid":"PBO:0058994"}


id: FYPO:0000460
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cohesion between centromeres of sister chromatids is decreased during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic centromeric sister chromatid cohesion","termid":"FYPO:0000459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000337","FYPO:0000641","FYPO:0001985","FYPO:0000631","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased mitotic centromeric sister chromatid cohesion","synonyms":[{"name":"decreased centromeric sister chromatid cohesion during mitotic cell cycle","type":"related"},{"name":"decreased centromeric sister chromatid cohesion during vegetative growth","type":"exact"},{"name":"decreased mitotic sister chromatid cohesion at centromere","type":"exact"},{"name":"decreased mitotic sister chromatid cohesion, centromeric","type":"exact"},{"name":"decreased sister chromatid cohesion at centromere during mitosis","type":"exact"},{"name":"reduced mitotic centromeric sister chromatid cohesion","type":"exact"}],"termid":"FYPO:0000460"}


id: GO:0061204
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation or disassembly of a filament composed of paramyosin molecules.","definition_xrefs":["GOC:dph","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin cytoskeleton organization","termid":"GO:0030036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0030036"],"is_obsolete":false,"name":"paramyosin filament assembly or disassembly","termid":"GO:0061204"}


id: PBO:0066371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinol dehydrogenase 14","termid":"PBO:0066371"}


id: GO:0044094
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any constituent part of a host cell's nucleus, a membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. The host is the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host intracellular part","termid":"GO:0033646"},{"relation_name":"part_of","term_name":"host cell nucleus","termid":"GO:0042025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell nuclear part","termid":"GO:0044094"}


id: PBO:0076119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin binding protein 3","termid":"PBO:0076119"}


id: PBO:0077153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TLC domain containing 3B","termid":"PBO:0077153"}


id: GO:0047854
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,4-diguanidinobutane + H2O = agmatine + urea.","definition_xrefs":["EC:3.5.3.20","RHEA:13597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016810"],"is_obsolete":false,"name":"diguanidinobutanase activity","secondary_identifiers":["MetaCyc:DIGUANIDINOBUTANASE-RXN","KEGG_REACTION:R01418"],"synonyms":[{"name":"1,4-diguanidinobutane amidinohydrolase activity","type":"related"}],"termid":"GO:0047854"}


id: MONDO:0018134
data:
  {"annotated_genes":["SJAG_03960","SJAG_03011","SJAG_02453","SJAG_00115","SJAG_00108","SJAG_00938"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88839,88838],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008962"},{"annotations":[87909],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014885"},{"annotations":[87764],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011997"},{"annotations":[88887],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011683"},{"annotations":[86926],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014070"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of amino acid and other organic acid metabolism","termid":"MONDO:0019189"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00108":null,"SJAG_00115":null,"SJAG_00938":null,"SJAG_02453":null,"SJAG_03011":null,"SJAG_03960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"disorder of melanin metabolism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5680988","Orphanet:352728","GARD:21528","MEDGEN:1842889"],"termid":"MONDO:0018134","terms_by_termid":{"MONDO:0008962":null,"MONDO:0011683":null,"MONDO:0011997":null,"MONDO:0014070":null,"MONDO:0014885":null},"xrefs":{"Monarch":{"xref_id":"0018134"}}}


id: PBO:0043932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cofactor required for Sp1 transcriptional activation subunit 5","termid":"PBO:0043932"}


id: PBO:0068166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 473","termid":"PBO:0068166"}


id: GO:1905935
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell fate determination.","definition_xrefs":["GOC:TermGenie","PMID:25793578","GOC:bhm","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of cell fate determination","termid":"GO:1905933"},{"relation_name":"positively_regulates","term_name":"cell fate determination","termid":"GO:0001709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell fate determination","synonyms":[{"name":"activation of cell fate determination","type":"narrow"},{"name":"up regulation of cell fate determination","type":"exact"},{"name":"up-regulation of cell fate determination","type":"exact"},{"name":"upregulation of cell fate determination","type":"exact"}],"termid":"GO:1905935"}


id: PBO:0067339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 432, pseudogene","termid":"PBO:0067339"}


id: MONDO:0001869
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the paraurethral gland.","direct_ancestors":[{"relation_name":"is_a","term_name":"vulva cancer","termid":"MONDO:0001528"},{"relation_name":"is_a","term_name":"paraurethral gland neoplasm","termid":"MONDO:0002219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"paraurethral gland cancer","secondary_identifiers":["UMLS:C0153621","MEDGEN:509343","ICD9:189.4","SCTID:363460002","DOID:14059"],"synonyms":[{"name":"cancer of paraurethral gland","type":"exact"},{"name":"malignant neoplasm of paraurethral gland","type":"exact"},{"name":"malignant paraurethral gland neoplasm","type":"exact"},{"name":"malignant tumor of paraurethral gland","type":"exact"},{"name":"malignant tumor of the paraurethral gland","type":"exact"},{"name":"malignant tumour of paraurethral gland","type":"exact"},{"name":"malignant tumour of the paraurethral gland","type":"exact"},{"name":"paraurethral gland cancer","type":"exact"}],"termid":"MONDO:0001869","xrefs":{"Monarch":{"xref_id":"0001869"}}}


id: PATO:0001729
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An organismal quality inhering in a bearer by virtue of the bearer's disposition to lose an entitity by natural process.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organismal quality","termid":"PATO:0001995"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shedability","termid":"PATO:0001729"}


id: PBO:0028620
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ribonucleoprotein_complex_binding","termid":"PBO:0028620"}


id: PBO:0068943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 187, pseudogene","termid":"PBO:0068943"}


id: PBO:0070470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 5","termid":"PBO:0070470"}


id: GO:0050897
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a cobalt ion (Co2+).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion binding","termid":"GO:0046914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0046872"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0046872","GO:0005488"],"is_obsolete":false,"name":"cobalt ion binding","synonyms":[{"name":"Co ion binding","type":"exact"},{"name":"cobalt binding","type":"exact"}],"termid":"GO:0050897"}


id: GO:1904996
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of leukocyte adhesion to vascular endothelial cell.","definition_xrefs":["PMID:23897866","GOC:bc","GO_REF:0000058","GOC:BHF","GOC:BHF_miRNA","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte cell-cell adhesion","termid":"GO:1903039"},{"relation_name":"is_a","term_name":"regulation of leukocyte adhesion to vascular endothelial cell","termid":"GO:1904994"},{"relation_name":"positively_regulates","term_name":"leukocyte adhesion to vascular endothelial cell","termid":"GO:0061756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of leukocyte adhesion to vascular endothelial cell","synonyms":[{"name":"activation of leukocyte adhesion to vascular endothelial cell","type":"narrow"},{"name":"up regulation of leukocyte adhesion to vascular endothelial cell","type":"exact"},{"name":"up-regulation of leukocyte adhesion to vascular endothelial cell","type":"exact"},{"name":"upregulation of leukocyte adhesion to vascular endothelial cell","type":"exact"}],"termid":"GO:1904996"}


id: GO:0098521
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a change in post-synaptic potential that inhibits muscle contraction.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromuscular junction","termid":"GO:0031594"},{"relation_name":"is_a","term_name":"inhibitory synapse","termid":"GO:0060077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"inhibitory neuromuscular junction","termid":"GO:0098521"}


id: PBO:0061674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 62","termid":"PBO:0061674"}


id: PBO:0060570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 6","termid":"PBO:0060570"}


id: PBO:0028014
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_meiotic_recombination_during_zygotic_meiosis","termid":"PBO:0028014"}


id: MONDO:0017855
data:
  {"annotated_genes":["SJAG_04199","SJAG_02038","SJAG_02527"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88583],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012650"},{"annotations":[88880],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011686"},{"annotations":[87430],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009973"}]},"cv_name":"mondo","definition":"T-B- severe combined immunodeficiency (SCID) is a group of rare monogenic primary immunodeficiency disorders characterized by a lack of functional peripheral T and B lymphocytes, resulting in recurrent early-onset severe respiratory viral, bacterial or fungal infections, diarrhea and failure to thrive. Hypersensitivity to ionizing radiation is a characteristic feature of some of its sub-types.","definition_xrefs":["Orphanet:317419"],"direct_ancestors":[{"relation_name":"is_a","term_name":"severe combined immunodeficiency","termid":"MONDO:0015974"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02038":null,"SJAG_02527":null,"SJAG_04199":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"T-B- severe combined immunodeficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1842252","GARD:21406","UMLS:C5679893"],"synonyms":[{"name":"T-B- SCID","type":"exact"}],"termid":"MONDO:0017855","terms_by_termid":{"MONDO:0009973":null,"MONDO:0011686":null,"MONDO:0012650":null},"xrefs":{"Monarch":{"xref_id":"0017855"}}}


id: GO:0050764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phagocytosis, the process in which phagocytes engulf external particulate material.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endocytosis","termid":"GO:0030100"},{"relation_name":"regulates","term_name":"phagocytosis","termid":"GO:0006909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"regulation of phagocytosis","termid":"GO:0050764"}


id: FYPO:0006700
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of CDP measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular pentose phosphate level","termid":"FYPO:0006705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular CDP level","synonyms":[{"name":"decreased cellular CDP level during mitotic cell cycle","type":"related"},{"name":"decreased cellular CDP level during vegetative growth","type":"exact"},{"name":"reduced cellular CDP level","type":"exact"}],"termid":"FYPO:0006700"}


id: MONDO:0850812
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary immunodeficiency disease characterized by impaired function or reduced numbers of dendritic cells.","definition_xrefs":["DOID:0111963"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn error of immunity","termid":"MONDO:0003778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"dendritic cell deficiency","secondary_identifiers":["MEDGEN:1656300","UMLS:C4746814"],"termid":"MONDO:0850812","xrefs":{"Monarch":{"xref_id":"0850812"}}}


id: PBO:0075610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speckle type BTB/POZ protein like","termid":"PBO:0075610"}


id: MONDO:0024410
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease caused by infection with Bifidobacterium.","definition_xrefs":["MONDO:patterns/infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bifidobacteriales infectious disease","termid":"MONDO:0006706"},{"relation_name":"is_a","term_name":"gram-positive bacterial infections","termid":"MONDO:0021679"},{"relation_name":"is_a","term_name":"anaerobic bacteria infectious disease","termid":"MONDO:0024389"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infection caused by Bifidobacterium","secondary_identifiers":["SCTID:721759009","UMLS:C1096283","MEDGEN:923145"],"synonyms":[{"name":"Bifidobacterium caused disease or disorder","type":"exact"},{"name":"Bifidobacterium disease or disorder","type":"exact"},{"name":"Bifidobacterium infection","type":"related"},{"name":"Bifidobacterium infectious disease","type":"exact"},{"name":"infection caused by Bifidobacterium","type":"exact"}],"termid":"MONDO:0024410","xrefs":{"Monarch":{"xref_id":"0024410"}}}


id: MONDO:0004645
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the buccal mucosa.","direct_ancestors":[{"relation_name":"is_a","term_name":"oral cavity cancer","termid":"MONDO:0005515"},{"relation_name":"is_a","term_name":"head and neck cancer","termid":"MONDO:0005627"},{"relation_name":"is_a","term_name":"buccal mucosa neoplasm","termid":"MONDO:0021241"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"cheek mucosa cancer","secondary_identifiers":["SCTID:363386008","UMLS:C0153373","DOID:8702","NCIT:C9320","MEDGEN:57550","ICD9:145.0"],"synonyms":[{"name":"buccal mucosa cancer","type":"exact"},{"name":"cancer of buccal mucosa","type":"exact"},{"name":"malignant buccal mucosa neoplasm","type":"exact"},{"name":"malignant buccal mucosa tumor","type":"exact"},{"name":"malignant buccal mucosa tumour","type":"exact"},{"name":"malignant neoplasm of buccal mucosa","type":"exact"},{"name":"malignant neoplasm of cheek, inner aspect","type":"exact"},{"name":"malignant neoplasm of the buccal mucosa","type":"exact"},{"name":"malignant tumor of buccal mucosa","type":"exact"},{"name":"malignant tumor of the buccal mucosa","type":"exact"},{"name":"malignant tumour of buccal mucosa","type":"exact"},{"name":"malignant tumour of the buccal mucosa","type":"exact"}],"termid":"MONDO:0004645","xrefs":{"Monarch":{"xref_id":"0004645"}}}


id: FYPO:0003379
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the second meiotic nuclear division, in which two chromatids in each chromosome are normally separated, does not occur.","definition_xrefs":["PomBase:mah","GO:0007135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished meiosis","termid":"FYPO:0000474"},{"relation_name":"is_a","term_name":"abnormal meiosis II","termid":"FYPO:0006526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"abolished meiosis II","synonyms":[{"name":"abolished second meiotic nuclear division","type":"exact"},{"name":"absent meiosis II","type":"exact"},{"name":"meiosis II abolished","type":"exact"},{"name":"meiosis II: absent","type":"exact"}],"termid":"FYPO:0003379"}


id: MONDO:0009469
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Benign recurrent intrahepatic cholestasis 1 (BRIC1) is characterized by episodes of liver dysfunction called cholestasis, during which the liver cells have a reduced ability to release a digestive fluid called bile. These episodes can last from weeks to months, and the time between them, during which there are usually no symptoms, can vary from weeks to years.Most people with BRIC1have their first episode of cholestasisintheir teens or twenties. Symptoms oftenpresent with severe itchiness, followed by yellowing of the skin and whites of the eyes (jaundice) a few weeks later. BRIC1 is caused by mutations in the ATP8B1 gene. This condition is inherited in an autosomal recessive pattern.BRIC1generally does not cause lasting damage to the liver. However, in rare cases, episodes of liver dysfunction may develop into a more severe, permanent form of liver disease known as progressive familial intrahepatic cholestasis (PFIC). BRIC and PFIC are sometimes considered to be part of a spectrum of intrahepatic cholestasis disorders of varying severity.","definition_xrefs":["GARD:0010028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"progressive familial intrahepatic cholestasis","termid":"MONDO:0015762"},{"relation_name":"is_a","term_name":"benign recurrent intrahepatic cholestasis","termid":"MONDO:0019008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005066","MONDO:0002515"],"is_obsolete":false,"name":"benign recurrent intrahepatic cholestasis type 1","secondary_identifiers":["OMIM:243300","UMLS:C4551899","MEDGEN:1637492","Orphanet:99960","GARD:10028","DOID:0070231"],"synonyms":[{"name":"ATP8B1 benign recurrent intrahepatic cholestasis","type":"exact"},{"name":"BRIC1","type":"exact"},{"name":"Bric type 1","type":"exact"},{"name":"Summerskill syndrome","type":"related"},{"name":"benign recurrent intrahepatic cholestasis 1","type":"related"},{"name":"benign recurrent intrahepatic cholestasis caused by mutation in ATP8B1","type":"exact"},{"name":"cholestasis, benign recurrent intrahepatic","type":"broad"},{"name":"cholestasis, benign recurrent intrahepatic 1","type":"related"},{"name":"cholestasis, benign recurrent intrahepatic, 1","type":"related"},{"name":"cholestasis, benign recurrent intrahepatic, type 1","type":"exact"},{"name":"mild ATP8B1 deficiency","type":"related"},{"name":"recurrent familial intrahepatic cholestasis 1","type":"related"}],"termid":"MONDO:0009469","xrefs":{"Monarch":{"xref_id":"0009469"}}}


id: GO:0070942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed killing of a target cell by a neutrophil.","definition_xrefs":["GOC:add","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte mediated cytotoxicity","termid":"GO:0001909"},{"relation_name":"is_a","term_name":"neutrophil mediated immunity","termid":"GO:0002446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neutrophil mediated cytotoxicity","synonyms":[{"name":"neutrophil mediated cell killing","type":"exact"}],"termid":"GO:0070942"}


id: MONDO:0008471
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chondrodysplasia characterized by disproportionate short stature, abnormal epiphyses and flattened vertebral bodies.","definition_xrefs":["Orphanet:94068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"type 2 collagenopathy","termid":"MONDO:0022800"},{"relation_name":"is_a","term_name":"COL2A1-related spondyloepiphyseal dysplasia","termid":"MONDO:0100602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondyloepiphyseal dysplasia congenita","secondary_identifiers":["DOID:14789","ICD10CM:Q77.7","MedDRA:10062920","NORD:1733","OMIM:183900","SCTID:278713008","UMLS:C2745959","MESH:C535788","GARD:4987","NANDO:2201348","MEDGEN:412530","ICD9:756.9"],"synonyms":[{"name":"SED congenita","type":"exact"},{"name":"SEDC","type":"exact"},{"name":"Spondyloepiphyseal Dysplasia, Congenital","type":"exact"},{"name":"Spranger-Wiedemann disease","type":"exact"},{"name":"congenital spondyloepiphyseal dysplasia","type":"related"},{"name":"spondyloepiphyseal dysplasia congenita","type":"exact"},{"name":"spondyloepiphyseal dysplasia, congenital type","type":"exact"}],"termid":"MONDO:0008471","xrefs":{"Monarch":{"xref_id":"0008471"}}}


id: PBO:0070785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 15","termid":"PBO:0070785"}


id: GO:0010864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of protein histidine kinase activity.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of protein histidine kinase activity (obsolete GO:0010864)","termid":"GO:0010864"}


id: FYPO:0002594
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone phosphorylation occurs to a greater extent than normal. All histone phosphorylation may be affected, or phosphorylation of specific sites on specific histones may be increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone phosphorylation during vegetative growth","termid":"FYPO:0002591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0002274","FYPO:0002494","FYPO:0001985"],"is_obsolete":false,"name":"increased histone phosphorylation during vegetative growth","synonyms":[{"name":"increased histone phosphorylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002594"}


id: GO:0007475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The coming together of the dorsal and ventral surfaces of the imaginal disc-derived wing during the conversion of a folded single layered wing disc to a flat bilayered wing.","definition_xrefs":["GOC:bf","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"imaginal disc-derived wing margin morphogenesis","termid":"GO:0008587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apposition of dorsal and ventral imaginal disc-derived wing surfaces","synonyms":[{"name":"apposition of dorsal and ventral wing surfaces","type":"exact"}],"termid":"GO:0007475"}


id: GO:0015115
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of silicates from one side of a membrane to the other. Silicates are the salts of silicic acids, and are usually composed of silicon and oxygen (Si[x]O[y]), one or more metals, and possibly hydrogen. Types of silicate include unisilicates, metasilicates and hydrous silicates.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transmembrane transporter activity","termid":"GO:0015103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"silicate transmembrane transporter activity","termid":"GO:0015115"}


id: PBO:0012596
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae DIS2","termid":"PBO:0012596"}


id: PR:O14061
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ast1 gene.","definition_xrefs":["UniProtKB:O14061","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asteroid homolog 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC962.05","synonyms":[{"name":"Spom972h-ast1","type":"exact"}],"termid":"PR:O14061"}


id: PR:O74885
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- xan1 gene.","definition_xrefs":["UniProtKB:O74885","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dioxygenase C576.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC576.01c","synonyms":[{"name":"Spom972h-xan1","type":"exact"}],"termid":"PR:O74885"}


id: MONDO:0020338
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Adult pure red cell aplasia is a rare acquired aplastic anemia characterized by a severe normocytic anemia with normal peripheral leukocyte and platelet counts, reticulocytopenia, high serum ferritin and transferrin saturation levels and isolated, almost complete absence of erythroblasts in the bone marrow with normal granulopoesis and megakaryopoesis. It presents with signs of severe anemia (fatigue, lethargy, pallor, intolerance of physical exercise and exertional dyspnea) in the absence of hemorrhagic symptoms.","definition_xrefs":["Orphanet:98872"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pure red-cell aplasia","termid":"MONDO:0001705"},{"relation_name":"is_a","term_name":"primary acquired red cell aplasia","termid":"MONDO:0020113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"adult pure red cell aplasia","secondary_identifiers":["UMLS:C4707560","GARD:10898","NCIT:C70548","NANDO:2200613","SCTID:765748009","icd11.foundation:45753120","NANDO:1200889","MEDGEN:1647585"],"synonyms":[{"name":"acquired PRCA","type":"related"},{"name":"acquired pure red cell aplasia","type":"related"},{"name":"adult pure red-cell aplasia","type":"exact"},{"name":"idiopathic pure red cell aplasia","type":"related"},{"name":"pure red-cell aplasia of adults","type":"exact"}],"termid":"MONDO:0020338","xrefs":{"Monarch":{"xref_id":"0020338"}}}


id: MONDO:0010889
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Arterial dissection-lentiginosis is a rare association syndrome, reported in several members of two families to date, and characterized by arterial dissection, occurring at an early age and presenting with a range of manifestations depending on the vascular territory involved (ex. headache, dysphasia, hemiparesis), in association with cystic medial necrosis and multiple lentigines (brown and black in color and mainly affecting the skin of the trunk and extremities).","definition_xrefs":["Orphanet:1682"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arterial dissection-lentiginosis syndrome","secondary_identifiers":["MESH:C563937","GARD:16577","OMIM:600459","UMLS:C1838122","MEDGEN:325345"],"synonyms":[{"name":"arterial dissection with lentiginosis","type":"related"}],"termid":"MONDO:0010889","xrefs":{"Monarch":{"xref_id":"0010889"}}}


id: GO:0046180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ketogluconate, the anion of ketogluconic acid, an aldonic acid derived from glucose containing a ketonic carbonyl group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketogluconate metabolic process","termid":"GO:0019522"},{"relation_name":"is_a","term_name":"aldonic acid biosynthetic process","termid":"GO:0046175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"ketogluconate biosynthetic process","synonyms":[{"name":"ketogluconate anabolism","type":"exact"},{"name":"ketogluconate biosynthesis","type":"exact"},{"name":"ketogluconate formation","type":"exact"},{"name":"ketogluconate synthesis","type":"exact"}],"termid":"GO:0046180"}


id: MONDO:1011840
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delta 9-tetrahydrocannabinol seizure, non-human animal","secondary_identifiers":["OMIA:000267"],"termid":"MONDO:1011840","xrefs":{"Monarch":{"xref_id":"1011840"}}}


id: PBO:0066600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras homolog family member Q pseudogene 3","termid":"PBO:0066600"}


id: PBO:0039311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkB homolog 5, RNA demethylase","termid":"PBO:0039311"}


id: GO:0003067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which hormones modulate the force with which blood passes through the circulatory system contributing to different values of blood pressure oscillating with a regularity of approximately 24 hours. A hormone is one of a group of substances formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells, in the same organism, upon which they have a specific regulatory action.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure by hormone","termid":"GO:0001990"},{"relation_name":"part_of","term_name":"circadian regulation of systemic arterial blood pressure","termid":"GO:0003052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"circadian regulation of systemic arterial blood pressure by hormone","termid":"GO:0003067"}


id: MONDO:0011080
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Stapes fixation (stapedovestibular ankylosis) is a hearing loss condition that appears as a consequence of annular ligament destruction followed by excessive connective tissue production during the healing process. This condition is mainly observed in otosclerosis, but is also found in chronic otitis media with tympanosclerosis, and other rare bone diseases such as Paget's disease and osteogenesis imperfecta (Lobstein disease).","definition_xrefs":["Orphanet:3235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progressive deafness with stapes fixation","secondary_identifiers":["UMLS:C1832354","MESH:C563316","icd11.foundation:1909954882","GARD:5170","MEDGEN:330446","SCTID:715529009","OMIM:601449"],"synonyms":[{"name":"Stapedo-vestibular ankylosis","type":"exact"},{"name":"Thies Reis syndrome","type":"related"},{"name":"Thies-Reis syndrome","type":"exact"},{"name":"deafness, progressive, with stapes fixation","type":"related"}],"termid":"MONDO:0011080","xrefs":{"Monarch":{"xref_id":"0011080"}}}


id: GO:2000314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of fibroblast growth factor receptor signaling pathway","termid":"GO:0040037"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation","termid":"GO:2000313"},{"relation_name":"negatively_regulates","term_name":"fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation","termid":"GO:0060825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation","synonyms":[{"name":"negative regulation of fibroblast growth factor receptor signalling pathway involved in neural plate anterior/posterior pattern formation","type":"exact"}],"termid":"GO:2000314"}


id: GO:1990801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any protein phosphorylation that is involved in mitotic spindle assembly.","definition_xrefs":["GOC:rb","PMID:21558801","GOC:TermGenie","GO_REF:0000060"],"gene_count":0,"genotype_count":0,"name":"obsolete protein phosphorylation involved in mitotic spindle assembly (obsolete GO:1990801)","synonyms":[{"name":"protein amino acid phosphorylation involved in mitotic spindle assembly","type":"exact"},{"name":"protein amino acid phosphorylation involved in spindle assembly involved in mitosis","type":"exact"},{"name":"protein phosphorylation involved in spindle assembly involved in mitosis","type":"exact"}],"termid":"GO:1990801"}


id: PBO:0053785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1036","termid":"PBO:0053785"}


id: PBO:0057119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 203b","termid":"PBO:0057119"}


id: MONDO:0010203
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Intellectual disability, Wolff type is a rare intellectual disability syndrome characterized by severe intellectual disability, characteristic facial features (low anterior hairline, upward slanting palpebral fissures, ocular hypertelorism, broad, bulbous nose, large ears with helix incompletely developed, thick lips, and micrognathia) and additional anomalies including peripheral joint contractures, delayed skeletal maturation, bilateral cleft lip and palate, strabismus, terminal hypoplasia of fingers, hypospadias, and bilateral inguinal hernias.","definition_xrefs":["Orphanet:3080"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"intellectual disability, Wolff type","secondary_identifiers":["MEDGEN:336345","UMLS:C1848439","GARD:3530","MESH:C537448","OMIM:277990"],"synonyms":[{"name":"WOLFF intellectual disability syndrome","type":"related"},{"name":"WOLFF mental retardation syndrome","type":"related"},{"name":"Wolff-Zimmermann syndrome","type":"exact"}],"termid":"MONDO:0010203","xrefs":{"Monarch":{"xref_id":"0010203"}}}


id: PBO:0090213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPOUT domain containing methyltransferase","termid":"PBO:0090213"}


id: PBO:0049968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIG1 hypoxia inducible domain family member 1A pseudogene 14","termid":"PBO:0049968"}


id: MONDO:0005484
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenoma that arises from the colon or rectum. The group of colorectal adenomas includes tubular, villous, and tubulovillous adenomas, traditional serrated adenomas, sessile serrated adenomas/polyps, and familial adenomatous polyposis.","definition_xrefs":["NCIT:C5673"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colorectal neoplasm","termid":"MONDO:0005335"},{"relation_name":"is_a","term_name":"digestive system adenoma","termid":"MONDO:0006180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"colorectal adenoma","secondary_identifiers":["UMLS:C1302401","EFO:0005406","DOID:0050914","MEDGEN:224904","DOID:0050860","SCTID:399432003"],"synonyms":[{"name":"adenoma of large bowel","type":"exact"},{"name":"adenoma of large intestine","type":"exact"},{"name":"adenoma of the large bowel","type":"exact"},{"name":"adenoma of the large intestine","type":"exact"},{"name":"colorectal adenoma","type":"exact"},{"name":"colorectum adenoma","type":"exact"},{"name":"large bowel adenoma","type":"exact"},{"name":"large intestine adenoma","type":"exact"}],"termid":"MONDO:0005484","xrefs":{"Monarch":{"xref_id":"0005484"}}}


id: PBO:0085032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-canonical poly(A) polymerase; involved in nuclear RNA degradation as a component of the TRAMP complex; catalyzes polyadenylation of hypomodified tRNAs, and snoRNA and rRNA precursors; overlapping but non-redundant functions with Pap2p","termid":"PBO:0085032"}


id: GO:0050057
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + 2-hydroxy-2-methylpropanenitrile = UDP + linamarin.","definition_xrefs":["MetaCyc:LINAMARIN-SYNTHASE-RXN","EC:2.4.1.63"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glycosyltransferase activity","termid":"GO:0008194"},{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"linamarin synthase activity","secondary_identifiers":["RHEA:20009"],"synonyms":[{"name":"UDP glucose ketone cyanohydrin glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:2-hydroxy-2-methylpropanenitrile beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:2-hydroxy-2-methylpropanenitrile beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:ketone cyanohydrin beta-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphate-glucose-ketone cyanohydrin beta-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-ketone cyanohydrin glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-ketone glucosyltransferase activity","type":"related"}],"termid":"GO:0050057"}


id: PBO:0071961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 kinase A2","termid":"PBO:0071961"}


id: PBO:0063062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pantothenate kinase 2","termid":"PBO:0063062"}


id: PBO:0072833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAP18 pseudogene 3","termid":"PBO:0072833"}


id: GO:1904171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of bleb assembly.","definition_xrefs":["GOC:als","GOC:TermGenie","PMID:25651887","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120033"},{"relation_name":"is_a","term_name":"regulation of bleb assembly","termid":"GO:1904170"},{"relation_name":"negatively_regulates","term_name":"bleb assembly","termid":"GO:0032060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"negative regulation of bleb assembly","synonyms":[{"name":"down regulation of bleb assembly","type":"exact"},{"name":"down regulation of cell blebbing","type":"exact"},{"name":"down-regulation of bleb assembly","type":"exact"},{"name":"down-regulation of cell blebbing","type":"exact"},{"name":"downregulation of bleb assembly","type":"exact"},{"name":"downregulation of cell blebbing","type":"exact"},{"name":"inhibition of bleb assembly","type":"narrow"},{"name":"inhibition of cell blebbing","type":"narrow"},{"name":"negative regulation of cell blebbing","type":"exact"}],"termid":"GO:1904171"}


id: GO:0015386
data:
  {"annotated_genes":["SJAG_04616"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[81795],"is_not":false,"summary":null,"term":"GO:0015386"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: K+(in) + H+(out) = K+(out) + H+(in).","definition_xrefs":["TC:2.A.37.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solute:potassium antiporter activity","termid":"GO:0022821"},{"relation_name":"is_a","term_name":"metal cation:proton antiporter activity","termid":"GO:0051139"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04616":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"potassium:proton antiporter activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:TRANS-RXN-42","RHEA:29467"],"synonyms":[{"name":"potassium:hydrogen antiporter activity","type":"exact"}],"termid":"GO:0015386","terms_by_termid":{"GO:0015386":null}}


id: MONDO:0000832
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete myeloid neoplasm (obsolete MONDO:0000832)","termid":"MONDO:0000832","xrefs":{"Monarch":{"xref_id":"0000832"}}}


id: GO:0180032
data:
  {"annotated_genes":["SJAG_00581"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111323],"is_not":false,"summary":null,"term":"GO:0180032"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H4 N6-acetyl-L-lysine (position 5) + H2O = histone H4 L-lysine (position 5) + acetate. This reaction represents the removal of an acetyl group from lysine at position 5 of the histone H4 protein.","definition_xrefs":["PMID:37459529"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H4K deacetylase activity","termid":"GO:0141051"},{"relation_name":"is_a","term_name":"histone deacetylase activity, hydrolytic mechanism","termid":"GO:0141221"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00581":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0033558"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0016810","GO:0003674","GO:0016787","GO:0019213","GO:0033558"],"is_obsolete":false,"name":"histone H4K5 deacetylase activity, hydrolytic mechanism","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"histone H4K5 deacetylase activity","type":"broad"}],"termid":"GO:0180032","terms_by_termid":{"GO:0180032":null}}


id: GO:0043954
data:
  {"annotated_genes":["SJAG_03812","SJAG_04841"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65706],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071788"},{"annotations":[99094],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062195"}]},"cv_name":"biological_process","definition":"The organization process that preserves a cellular component in a stable functional or structural state.","definition_xrefs":["GOC:jl","GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03812":null,"SJAG_04841":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular component maintenance","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0071956"],"synonyms":[{"name":"cellular component maintenance at cellular level","type":"exact"}],"termid":"GO:0043954","terms_by_termid":{"GO:0062195":null,"GO:0071788":null}}


id: GO:0002019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which angiotensin directly modulates the rate of urine output by the kidney.","definition_xrefs":["ISBN:0721643949","GOC:dph","GOC:tb","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of blood volume by renin-angiotensin","termid":"GO:0002016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of renal output by angiotensin","synonyms":[{"name":"angiotensin mediated control of renal output","type":"related"},{"name":"angiotensin mediated regulation of renal output","type":"exact"},{"name":"angiotensin-mediated regulation of renal output","type":"exact"}],"termid":"GO:0002019"}


id: FYECO:0000364
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which diamide was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ diamide","synonyms":[{"name":"+ N,N,N',N'-tetramethyldiazene-1,2-dicarboxamide","type":"exact"}],"termid":"FYECO:0000364"}


id: PBO:0088895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anoctamin calcium-activated chloride channel OR Ca(2+)-activated phospholipid scramblase involved in ER-plasma membrane tethering Ist2","termid":"PBO:0088895"}


id: FYPO:0000003
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_00364:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00364","name":"rad3delta","uniquename":"SJAG_00364:allele-1"},"SJAG_00370:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00370","name":"erg1delta","uniquename":"SJAG_00370:allele-1"},"SJAG_00409:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00409","name":"gpd1delta","uniquename":"SJAG_00409:allele-1"},"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"},"SJAG_00429:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00429","name":"rad26delta","uniquename":"SJAG_00429:allele-1"},"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_00601:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00601","name":"rip1delta","uniquename":"SJAG_00601:allele-1"},"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_01205:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01205","name":"crb2delta","uniquename":"SJAG_01205:allele-1"},"SJAG_01242:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01242","name":"vps32delta","uniquename":"SJAG_01242:allele-1"},"SJAG_01355:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01355","name":"cox6delta","uniquename":"SJAG_01355:allele-1"},"SJAG_01410:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01410","name":"rad51delta","uniquename":"SJAG_01410:allele-1"},"SJAG_01605:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01605","name":"rad9delta","uniquename":"SJAG_01605:allele-1"},"SJAG_01680:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01680","name":"chk1delta","uniquename":"SJAG_01680:allele-1"},"SJAG_01753:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01753","name":"mdh1delta","uniquename":"SJAG_01753:allele-1"},"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"},"SJAG_01794:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01794","name":"scd2delta","uniquename":"SJAG_01794:allele-1"},"SJAG_01946:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01946","name":"cem1delta","uniquename":"SJAG_01946:allele-1"},"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K 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coverage","gene_uniquename":"SJAG_02527","name":"lig4::KanMX6","uniquename":"SJAG_02527:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_02594:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02594","name":"arb1delta","uniquename":"SJAG_02594:allele-1"},"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_02668:allele-1":{"allele_type":"amino_acid_mutation","description":"R77W","gene_uniquename":"SJAG_02668","name":"mpe1-R77W","uniquename":"SJAG_02668:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_02819:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02819","name":"efc25delta","uniquename":"SJAG_02819:allele-1"},"SJAG_02860:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02860","name":"wcs1delta","uniquename":"SJAG_02860:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03118:allele-2":{"allele_type":"nonsense_mutation","description":"aa61->stop","gene_uniquename":"SJAG_03118","name":"frameshift","uniquename":"SJAG_03118:allele-2"},"SJAG_03198:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03198","name":"oar2delta","uniquename":"SJAG_03198:allele-1"},"SJAG_03198:allele-2":{"allele_type":"amino_acid_mutation","description":"Y189D cold sensitive","gene_uniquename":"SJAG_03198","name":"oar2-51","uniquename":"SJAG_03198:allele-2"},"SJAG_03198:allele-3":{"allele_type":"amino_acid_mutation","description":"R72A,L75A,R106A,L109A","gene_uniquename":"SJAG_03198","name":"oar2-dm12","synonyms":[{"name":"destruction box mutations","reference":"PMID:23786411","type":"exact"}],"uniquename":"SJAG_03198:allele-3"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T 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yeast cell population phenotype","type":"exact"}],"termid":"FYPO:0000003","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000078":null,"FYECO:0000081":null,"FYECO:0000103":null,"FYECO:0000117":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000207":null,"FYECO:0000272":null,"FYECO:0000314":null,"FYECO:0000315":null,"FYPO:0000079":null,"FYPO:0000080":null,"FYPO:0000082":null,"FYPO:0000085":null,"FYPO:0000087":null,"FYPO:0000088":null,"FYPO:0000097":null,"FYPO:0000106":null,"FYPO:0000107":null,"FYPO:0000245":null,"FYPO:0000271":null,"FYPO:0000584":null,"FYPO:0000588":null,"FYPO:0000674":null,"FYPO:0000708":null,"FYPO:0000714":null,"FYPO:0000726":null,"FYPO:0000841":null,"FYPO:0001214":null,"FYPO:0001234":null,"FYPO:0001355":null,"FYPO:0001357":null,"FYPO:0001387":null,"FYPO:0001408":null,"FYPO:0001419":null,"FYPO:0001690":null,"FYPO:0002058":null,"FYPO:0002061":null,"FYPO:0003535":null,"FYPO:0004481":null,"FYPO:0004693":null,"FYPO:0005152":null,"FYPO:0005231":null,"FYPO:0005705":null,"FYPO:0005883":null,"FYPO:0007521":null,"FYPO:0007522":null,"FYPO:0008046":null,"FYPO:0009111":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: GO:0046791
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any viral process that results in the inhibition of complement neutralization of the host cell.","definition_xrefs":["PMID:10587354"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host complement neutralization (obsolete GO:0046791)","synonyms":[{"name":"negative regulation by virus of host complement neutralization","type":"exact"},{"name":"suppression by virus of host complement neutralization","type":"exact"}],"termid":"GO:0046791"}


id: GO:0036494
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, or increases the frequency, rate or extent of translation initiation as a result of endoplasmic reticulum stress.","definition_xrefs":["GOC:PARL","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of translational initiation in response to stress","termid":"GO:0032058"},{"relation_name":"is_a","term_name":"regulation of translation initiation in response to endoplasmic reticulum stress","termid":"GO:0036491"},{"relation_name":"is_a","term_name":"positive regulation of translation in response to endoplasmic reticulum stress","termid":"GO:0036493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of translation initiation in response to endoplasmic reticulum stress","synonyms":[{"name":"positive regulation of translation initiation in response to ER stress","type":"exact"}],"termid":"GO:0036494"}


id: GO:0045970
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of juvenile hormone.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of juvenile hormone metabolic process","termid":"GO:0045928"},{"relation_name":"is_a","term_name":"regulation of juvenile hormone catabolic process","termid":"GO:0045952"},{"relation_name":"is_a","term_name":"negative regulation of lipid catabolic process","termid":"GO:0050995"},{"relation_name":"negatively_regulates","term_name":"juvenile hormone catabolic process","termid":"GO:0006719"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"negative regulation of juvenile hormone catabolic process","synonyms":[{"name":"down regulation of juvenile hormone catabolic process","type":"exact"},{"name":"down-regulation of juvenile hormone catabolic process","type":"exact"},{"name":"downregulation of juvenile hormone catabolic process","type":"exact"},{"name":"inhibition of juvenile hormone catabolic process","type":"narrow"},{"name":"negative regulation of juvenile hormone breakdown","type":"exact"},{"name":"negative regulation of juvenile hormone catabolism","type":"exact"},{"name":"negative regulation of juvenile hormone degradation","type":"exact"}],"termid":"GO:0045970"}


id: PBO:0028553
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_microtubule_during_mitotic_interphase,_with_protein_mislocalized_to_cytoplasmic_foci","termid":"PBO:0028553"}


id: PBO:0057529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 646","termid":"PBO:0057529"}


id: MONDO:0019275
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete other genetic epidermal disease (obsolete MONDO:0019275)","secondary_identifiers":["Orphanet:79360"],"termid":"MONDO:0019275","xrefs":{"Monarch":{"xref_id":"0019275"}}}


id: GO:1905558
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mitotic nuclear envelope disassembly.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:18765790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"regulation of mitotic nuclear envelope disassembly","termid":"GO:1905557"},{"relation_name":"negatively_regulates","term_name":"mitotic nuclear membrane disassembly","termid":"GO:0007077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of mitotic nuclear envelope disassembly","synonyms":[{"name":"inhibition of mitotic nuclear envelope degradation","type":"narrow"},{"name":"inhibition of mitotic nuclear envelope disassembly","type":"narrow"},{"name":"negative regulation of mitotic nuclear envelope breakdown","type":"exact"},{"name":"down regulation of mitotic nuclear envelope breakdown","type":"exact"},{"name":"down regulation of mitotic nuclear envelope catabolism","type":"exact"},{"name":"down regulation of mitotic nuclear envelope degradation","type":"exact"},{"name":"down regulation of mitotic nuclear envelope disassembly","type":"exact"},{"name":"down-regulation of mitotic nuclear envelope breakdown","type":"exact"},{"name":"down-regulation of mitotic nuclear envelope catabolism","type":"exact"},{"name":"down-regulation of mitotic nuclear envelope degradation","type":"exact"},{"name":"down-regulation of mitotic nuclear envelope disassembly","type":"exact"},{"name":"downregulation of mitotic nuclear envelope breakdown","type":"exact"},{"name":"downregulation of mitotic nuclear envelope catabolism","type":"exact"},{"name":"downregulation of mitotic nuclear envelope degradation","type":"exact"},{"name":"downregulation of mitotic nuclear envelope disassembly","type":"exact"},{"name":"inhibition of mitotic nuclear envelope breakdown","type":"narrow"},{"name":"inhibition of mitotic nuclear envelope catabolism","type":"narrow"},{"name":"negative regulation of mitotic nuclear envelope catabolism","type":"exact"},{"name":"negative regulation of mitotic nuclear envelope degradation","type":"exact"}],"termid":"GO:1905558"}


id: PBO:0034629
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiotic_centromere_clustering_with_centromeres_dissociated_from_spindle_pole_body","termid":"PBO:0034629"}


id: GO:0000940
data:
  {"annotated_genes":["SJAG_03437","SJAG_01228","SJAG_01224","SJAG_03540","SJAG_04076","SJAG_02731","SJAG_04259","SJAG_02814","SJAG_03220","SJAG_03683","SJAG_05266","SJAG_01211","SJAG_01082","SJAG_00918","SJAG_05319","SJAG_01775","SJAG_02346","SJAG_00418","SJAG_01371","SJAG_05220","SJAG_02761","SJAG_03327","SJAG_00794"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[102194,116356,120538],"is_not":false,"summary":null,"term":"GO:0000940"},{"annotations":[69839,81408,63262,102336,118777,61039,64519,76703,78287,64592],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0042729"},{"annotations":[103154,115640],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0180019"},{"annotations":[76068,71613,60783,81639],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000444"},{"annotations":[76635,78889,77459,77621],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031262"}]},"cv_name":"cellular_component","definition":"The region of a kinetochore most external to centromeric DNA; this outer region mediates kinetochore-microtubule interactions.","definition_xrefs":["PMID:11483983","GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"kinetochore","termid":"GO:0000776"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00418":null,"SJAG_00794":null,"SJAG_00918":null,"SJAG_01082":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01228":null,"SJAG_01371":null,"SJAG_01775":null,"SJAG_02346":null,"SJAG_02731":null,"SJAG_02761":null,"SJAG_02814":null,"SJAG_03220":null,"SJAG_03327":null,"SJAG_03437":null,"SJAG_03540":null,"SJAG_03683":null,"SJAG_04076":null,"SJAG_04259":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0000776"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005575","GO:0005694","GO:0032991","GO:0000776"],"is_obsolete":false,"name":"outer kinetochore","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0000942"],"synonyms":[{"name":"condensed chromosome outer kinetochore","type":"exact"},{"name":"condensed nuclear chromosome outer kinetochore","type":"exact"},{"name":"outer kinetochore of condensed chromosome","type":"exact"},{"name":"outer kinetochore of condensed nuclear chromosome","type":"exact"},{"name":"outer kinetochore plate","type":"narrow"}],"termid":"GO:0000940","terms_by_termid":{"GO:0000444":null,"GO:0000940":null,"GO:0031262":null,"GO:0042729":null,"GO:0180019":null}}


id: PBO:0061699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUPR2 pseudogene 1","termid":"PBO:0061699"}


id: PATO:0000495
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000495 persistence value (obsolete PATO:0000495)","termid":"PATO:0000495"}


id: FYPO:0004224
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which trimethylation of lysine at position 20 of histone H4 occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H4-K20 methylation during vegetative growth","termid":"FYPO:0004215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002274","FYPO:0002494","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased histone H4-K20 trimethylation during vegetative growth","synonyms":[{"name":"decreased H4K20me3 during vegetative growth","type":"exact"},{"name":"decreased histone H4-K20 trimethylation during mitotic cell cycle","type":"related"},{"name":"decreased histone H4K20 trimethylation during vegetative growth","type":"exact"},{"name":"decreased histone lysine H4-K20 trimethylation during vegetative growth","type":"exact"},{"name":"reduced histone H4-K20 trimethylation during vegetative growth","type":"exact"}],"termid":"FYPO:0004224"}


id: MONDO:0018140
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete burning mouth syndrome (obsolete MONDO:0018140)","termid":"MONDO:0018140","xrefs":{"Monarch":{"xref_id":"0018140"}}}


id: PBO:0110468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain 40 molecular ruler complex subunit","termid":"PBO:0110468"}


id: PBO:0065437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, ATPase 1 pseudogene 10","termid":"PBO:0065437"}


id: PBO:0043960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin gamma E, pseudogene","termid":"PBO:0043960"}


id: GO:0047290
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-N-acetylneuraminyl-(2->3)-beta-D-galactosyl-(1->3)-N-acetyl-D-galactosaminyl-R + CMP-N-acetyl-beta-neuraminate = alpha-N-acetylneuraminyl-(2->3)-beta-D-galactosyl-(1->3)-[N-acetyl-alpha-neuraminyl-(2->6)]-N-acetyl-D-galactosaminyl-R + CMP.","definition_xrefs":["RHEA:53896"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sialyltransferase activity","termid":"GO:0008373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"alpha-N-acetylneuraminyl-2,3-beta-galactosyl-1,3-N-acetyl-galactosaminide 6-alpha-sialyltransferase activity","secondary_identifiers":["Reactome:R-HSA-981809","EC:2.4.3.7","KEGG_REACTION:R04635","MetaCyc:2.4.99.7-RXN"],"synonyms":[{"name":"(alpha-N-acetylneuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity","type":"exact"},{"name":"NeuAc-alpha-2,3-Gal-beta-1,3-GalNAc-alpha-2,6-sialyltransferase activity","type":"related"},{"name":"ST6GALNAC activity","type":"related"},{"name":"alpha-N-acetylneuraminyl-2,3-beta-galactosyl-1,3-N-acetyl-galactosaminide alpha-2,6-sialyltransferase activity","type":"related"},{"name":"cytidine monophosphoacetylneuraminate-(alpha-N-acetylneuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide-alpha-2,6-sialyltransferase activity","type":"related"},{"name":"sialyltransferase activity","type":"related"}],"termid":"GO:0047290"}


id: GO:0021814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a cell along the process of a radial glial cell involved in cerebral cortex glial-mediated radial migration.","definition_xrefs":["GOC:dgh","PMID:12626695","GOC:cls","GOC:dph","GO_REF:0000021","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell motility","termid":"GO:0048870"},{"relation_name":"part_of","term_name":"cerebral cortex radial glia-guided migration","termid":"GO:0021801"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell motility involved in cerebral cortex radial glia guided migration","synonyms":[{"name":"cell locomotion involved in cerebral cortex glial-mediated radial migration","type":"exact"},{"name":"cell locomotion involved in cerebral cortex radial glia guided migration","type":"related"}],"termid":"GO:0021814"}


id: MONDO:0800374
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"catecholaminergic polymorphic ventricular tachycardia","termid":"MONDO:0017990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"ventricular tachycardia, catecholaminergic polymorphic 6","secondary_identifiers":["MEDGEN:1712279","UMLS:C5394069"],"synonyms":[{"name":"CPVT6","type":"exact"}],"termid":"MONDO:0800374","xrefs":{"Monarch":{"xref_id":"0800374"}}}


id: MONDO:0008011
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antigen defined by monoclonal antibody T87","secondary_identifiers":["MEDGEN:331821","UMLS:C1834756","OMIM:158040"],"synonyms":[{"name":"Msk2","type":"related"},{"name":"antigen defined by monoclonal antibody T87","type":"exact"}],"termid":"MONDO:0008011","xrefs":{"Monarch":{"xref_id":"0008011"}}}


id: FYPO:0007073
data:
  {"alleles_by_uniquename":{"SJAG_01050:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01050","name":"nur1delta","uniquename":"SJAG_01050:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121280],"is_not":false,"summary":null,"term":"FYPO:0007073"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nuclear envelope is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to nucleus during vegetative growth","termid":"FYPO:0001514"},{"relation_name":"is_a","term_name":"abnormal protein localization to nuclear envelope during vegetative growth","termid":"FYPO:0004885"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01050":null,"SJAG_01745":null},"genotype_count":1,"genotypes_by_uniquename":{"nur1delta":{"display_name":"nur1delta","display_uniquename":"nur1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01050:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to nuclear envelope during vegetative growth","references_by_uniquename":{"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_01050"],"single_locus_genotype_uniquenames":["nur1delta"],"synonyms":[{"name":"decreased protein localisation to nuclear envelope during vegetative growth","type":"exact"},{"name":"decreased protein localization to nuclear envelope during mitotic cell cycle","type":"related"},{"name":"reduced protein localization to nuclear envelope during vegetative growth","type":"exact"}],"termid":"FYPO:0007073","terms_by_termid":{"FYECO:0000137":null,"FYPO:0007073":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: GO:0051236
data:
  {"annotated_genes":["SJAG_04202","SJAG_02757","SJAG_04083","SJAG_00992","SJAG_02534","SJAG_01715","SJAG_03299","SJAG_03300","SJAG_04347","SJAG_01529","SJAG_04360","SJAG_04536","SJAG_00375","SJAG_04480","SJAG_03470","SJAG_02661","SJAG_03693","SJAG_04589","SJAG_02704","SJAG_01584","SJAG_01467","SJAG_03986","SJAG_04645","SJAG_03729","SJAG_04017","SJAG_03002","SJAG_04379","SJAG_02425","SJAG_04310","SJAG_04656","SJAG_02209","SJAG_00298","SJAG_00093","SJAG_01652","SJAG_04721","SJAG_01374","SJAG_01185","SJAG_00178","SJAG_02520","SJAG_04115","SJAG_03593","SJAG_01013","SJAG_04472","SJAG_03847","SJAG_01065","SJAG_05328","SJAG_01449","SJAG_03156","SJAG_00641","SJAG_04622","SJAG_03358","SJAG_04148","SJAG_03283","SJAG_01083","SJAG_00471","SJAG_02274"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102971,61701,91301,79250,78422,74454,63276,119129,74538,75816,81939],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006406"},{"annotations":[74922],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031990"},{"annotations":[60138,58699,65570],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051028"},{"annotations":[113604,76107,112277,120808,119889,75492,98349,103684,75876,94007,111706,105764,117663,79066,98761,73128,117915,104473,76447,71631,116320,109470,76201,82163,112976,118173,77421,74921,103218,74768],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016973"},{"annotations":[106894,97944,81827,95803,77325,76880],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006405"},{"annotations":[104379],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006404"},{"annotations":[107107,107578,80310,73895],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006409"},{"annotations":[80895],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016031"},{"annotations":[81292],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071528"}]},"cv_name":"biological_process","definition":"The directed movement of RNA to a specific location.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of localization","termid":"GO:0051234"},{"relation_name":"part_of","term_name":"RNA localization","termid":"GO:0006403"}],"gene_count":56,"genes_by_uniquename":{"SJAG_00093":null,"SJAG_00178":null,"SJAG_00298":null,"SJAG_00375":null,"SJAG_00471":null,"SJAG_00641":null,"SJAG_00992":null,"SJAG_01013":null,"SJAG_01065":null,"SJAG_01083":null,"SJAG_01185":null,"SJAG_01374":null,"SJAG_01449":null,"SJAG_01467":null,"SJAG_01529":null,"SJAG_01584":null,"SJAG_01652":null,"SJAG_01715":null,"SJAG_02209":null,"SJAG_02274":null,"SJAG_02425":null,"SJAG_02520":null,"SJAG_02534":null,"SJAG_02661":null,"SJAG_02704":null,"SJAG_02757":null,"SJAG_03002":null,"SJAG_03156":null,"SJAG_03283":null,"SJAG_03299":null,"SJAG_03300":null,"SJAG_03358":null,"SJAG_03470":null,"SJAG_03593":null,"SJAG_03693":null,"SJAG_03729":null,"SJAG_03847":null,"SJAG_03986":null,"SJAG_04017":null,"SJAG_04083":null,"SJAG_04115":null,"SJAG_04148":null,"SJAG_04202":null,"SJAG_04310":null,"SJAG_04347":null,"SJAG_04360":null,"SJAG_04379":null,"SJAG_04472":null,"SJAG_04480":null,"SJAG_04536":null,"SJAG_04589":null,"SJAG_04622":null,"SJAG_04645":null,"SJAG_04656":null,"SJAG_04721":null,"SJAG_05328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"establishment of RNA localization","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"RNA positioning","type":"exact"},{"name":"RNA recruitment","type":"exact"},{"name":"establishment of RNA localisation","type":"exact"}],"termid":"GO:0051236","terms_by_termid":{"GO:0006404":null,"GO:0006405":null,"GO:0006406":null,"GO:0006409":null,"GO:0016031":null,"GO:0016973":null,"GO:0031990":null,"GO:0051028":null,"GO:0071528":null}}


id: GO:0060802
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from an epiblast cell to an extraembryonic ectoderm cell.","definition_xrefs":["PMID:14511481","GOC:dph","PMID:31391456","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"epiblast cell-extraembryonic ectoderm cell signaling","termid":"GO:0060802"}


id: MONDO:0022913
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cutler bass Romshe syndrome (obsolete MONDO:0022913)","termid":"MONDO:0022913","xrefs":{"Monarch":{"xref_id":"0022913"}}}


id: FYPO:0001295
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of palmitoyl-CoA ligase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal palmitoyl-CoA ligase activity","synonyms":[{"name":"normal palmitoyl-CoA synthetase activity","type":"exact"}],"termid":"FYPO:0001295"}


id: GO:0020023
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A sub-structure within the large single mitochondrion of kinetoplastid parasites and which is closely associated with the flagellar pocket and basal body of the flagellum.","definition_xrefs":["GOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"mitochondrion","termid":"GO:0005739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005739","GO:0005575"],"is_obsolete":false,"name":"kinetoplast","secondary_identifiers":["Wikipedia:Kinetoplast"],"termid":"GO:0020023"}


id: MONDO:1012534
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary surfactant metabolism dysfunction, non-human animal","termid":"MONDO:1011933"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary surfactant metabolism dysfunction, dog","secondary_identifiers":["OMIA:002251-9615"],"termid":"MONDO:1012534","xrefs":{"Monarch":{"xref_id":"1012534"}}}


id: GO:0042215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a phenol, any compound containing one or more hydroxyl groups directly attached to an aromatic carbon ring, in the absence of oxygen.","definition_xrefs":["PMID:12697029"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anaerobic phenol-containing compound metabolic process","secondary_identifiers":["UM-BBD_pathwayID:phe"],"synonyms":[{"name":"anaerobic phenol-containing compound metabolism","type":"exact"}],"termid":"GO:0042215"}


id: PATO:0001475
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A position which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased position","synonyms":[{"name":"high position","type":"related"}],"termid":"PATO:0001475"}


id: PBO:0079307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 3B","termid":"PBO:0079307"}


id: PBO:0058483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5590","termid":"PBO:0058483"}


id: PBO:0078209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 7-2","termid":"PBO:0078209"}


id: GO:2000729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mesenchymal cell proliferation involved in ureter development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mesenchymal cell proliferation","termid":"GO:0002053"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of mesenchymal cell proliferation involved in ureter development","termid":"GO:0072199"},{"relation_name":"positively_regulates","term_name":"mesenchymal cell proliferation involved in ureter development","termid":"GO:0072198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mesenchymal cell proliferation involved in ureter development","synonyms":[{"name":"positive regulation of ureter mesenchymal cell proliferation","type":"related"},{"name":"positive regulation of ureteral mesenchymal cell proliferation","type":"related"}],"termid":"GO:2000729"}


id: PBO:0058292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4666b","termid":"PBO:0058292"}


id: PBO:0001160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination protein Rec25","termid":"PBO:0001160"}


id: FYPO:0006656
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the unwinding of G-quadruplex DNA structures occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome organization","termid":"FYPO:0000641"},{"relation_name":"is_a","term_name":"abnormal cellular component organization during vegetative growth","termid":"FYPO:0001353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000641","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased G-quadruplex DNA unwinding","synonyms":[{"name":"decreased G-quadruplex DNA unwinding during mitotic cell cycle","type":"related"},{"name":"decreased G-quadruplex DNA unwinding during vegetative growth","type":"exact"},{"name":"decreased G-quartet DNA unwinding","type":"exact"},{"name":"decreased G4 DNA unwinding","type":"exact"},{"name":"reduced G-quadruplex DNA unwinding","type":"exact"}],"termid":"FYPO:0006656"}


id: MONDO:0032751
data:
  {"annotated_genes":["SJAG_02431","SJAG_03703"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88940,88941],"is_not":false,"summary":null,"term":"MONDO:0032751"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"Sheldon-hall syndrome","termid":"MONDO:0011128"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"arthrogryposis, distal, type 2B3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1676839","OMIM:618436","DOID:0111602","UMLS:C5193098"],"synonyms":[{"name":"DA2B3","type":"exact"},{"name":"arthrogryposis, distal, type 2B3","type":"exact"},{"name":"arthrogryposis, distal, type 2B3 (Sheldon-Hall)","type":"exact"},{"name":"distal arthrogryposis type 2B3 (Sheldon-Hall)","type":"exact"}],"termid":"MONDO:0032751","terms_by_termid":{"MONDO:0032751":null},"xrefs":{"Monarch":{"xref_id":"0032751"}}}


id: MONDO:0958270
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"central precocious puberty","termid":"MONDO:0019165"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central precocious puberty in male","secondary_identifiers":["UMLS:C5816736","Orphanet:649929","MEDGEN:1853132"],"termid":"MONDO:0958270","xrefs":{"Monarch":{"xref_id":"0958270"}}}


id: GO:0047159
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-O-(1Z-alkenyl)-sn-glycero-3-phosphocholine + an acyl-CoA = 1-O-(1Z-alkenyl)-2-acyl-sn-glycero-3-phosphocholine + CoA.","definition_xrefs":["RHEA:10344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"plasmalogen synthase activity","secondary_identifiers":["EC:2.3.1.25","MetaCyc:PLASMALOGEN-SYNTHASE-RXN"],"synonyms":[{"name":"1-alkenylglycerophosphocholine O-acyltransferase activity","type":"related"},{"name":"acyl-CoA:1-alkenylglycerophosphocholine O-acyltransferase activity","type":"related"}],"termid":"GO:0047159"}


id: MONDO:0006960
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disease or damage involving the SCIATIC NERVE, which divides into the PERONEAL NERVE and TIBIAL NERVE (see also PERONEAL NEUROPATHIES and TIBIAL NEUROPATHY). Clinical manifestations may include SCIATICA or pain localized to the hip, PARESIS or PARALYSIS of posterior thigh muscles and muscles innervated by the peroneal and tibial nerves, and sensory loss involving the lateral and posterior thigh, posterior and lateral leg, and sole of the foot. The sciatic nerve may be affected by trauma; ISCHEMIA; COLLAGEN DISEASES; and other conditions. (From Adams et al., Principles of Neurology, 6th ed, p1363)","definition_xrefs":["MESH:D020426"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"lesion of sciatic nerve","termid":"MONDO:0001543"},{"relation_name":"is_a","term_name":"mononeuropathy","termid":"MONDO:0001397"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"sciatic neuropathy","secondary_identifiers":["MEDGEN:57705","SCTID:52585001","UMLS:C0149940","EFO:1001166","DOID:11446","MedDRA:10048950"],"termid":"MONDO:0006960","xrefs":{"Monarch":{"xref_id":"0006960"}}}


id: PBO:0040244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy related 3 pseudogene 1","termid":"PBO:0040244"}


id: MONDO:0971043
data:
  {"annotated_genes":["SJAG_03430"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88781],"is_not":false,"summary":null,"term":"MONDO:0971043"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03430":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with hypotonia, feeding difficulties, facial dysmorphism, and brain abnormalities","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5935629","MEDGEN:1857550","OMIM:620852"],"termid":"MONDO:0971043","terms_by_termid":{"MONDO:0971043":null},"xrefs":{"Monarch":{"xref_id":"0971043"}}}


id: MONDO:0015090
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Autosomal recessive form of pure hereditary spastic paraplegia.","definition_xrefs":["MONDO:patterns/autosomal_recessive"],"gene_count":0,"genotype_count":0,"name":"obsolete autosomal recessive pure spastic paraplegia (obsolete MONDO:0015090)","secondary_identifiers":["Orphanet:100982"],"synonyms":[{"name":"autosomal recessive pure HSP","type":"exact"},{"name":"autosomal recessive pure SPG","type":"exact"},{"name":"autosomal recessive pure hereditary spastic paraplegia","type":"exact"},{"name":"autosomal recessive uncomplicated HSP","type":"exact"},{"name":"autosomal recessive uncomplicated SPG","type":"exact"},{"name":"autosomal recessive uncomplicated spastic paraplegia","type":"exact"},{"name":"pure hereditary spastic paraplegia, autosomal recessive","type":"exact"}],"termid":"MONDO:0015090","xrefs":{"Monarch":{"xref_id":"0015090"}}}


id: MONDO:0013001
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete synesthesia (obsolete MONDO:0013001)","secondary_identifiers":["OMIM:612759","MESH:C562460"],"synonyms":[{"name":"Synsth","type":"related"},{"name":"synesthesia","type":"exact"}],"termid":"MONDO:0013001","xrefs":{"Monarch":{"xref_id":"0013001"}}}


id: PBO:0065293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRRX2 antisense RNA 1","termid":"PBO:0065293"}


id: PBO:0078979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (anticodon GCT) 5-1","termid":"PBO:0078979"}


id: GO:0001725
data:
  {"annotated_genes":["SJAG_01739"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[67279],"is_not":false,"summary":null,"term":"GO:0001725"}]},"cv_name":"cellular_component","definition":"A contractile actin filament bundle that consists of short actin filaments with alternating polarity, cross-linked by alpha-actinin and possibly other actin bundling proteins, and with myosin present in a periodic distribution along the fiber.","definition_xrefs":["PMID:16651381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actomyosin","termid":"GO:0042641"},{"relation_name":"is_a","term_name":"contractile actin filament bundle","termid":"GO:0097517"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01739":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015629"}],"interesting_parent_ids":["GO:0015629","GO:0005575"],"is_obsolete":false,"name":"stress fiber","references_by_uniquename":{"GO_REF:0000044":null},"synonyms":[{"name":"actin cable","type":"related"},{"name":"stress fibre","type":"exact"}],"termid":"GO:0001725","terms_by_termid":{"GO:0001725":null}}


id: MOD:01257
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["PubMed:12716131","Unimod:194#K","PubMed:14997490"],"direct_ancestors":[{"relation_name":"is_a","term_name":"6-aminoquinolyl-N-hydroxysuccinimidyl carbamate","termid":"MOD:00547"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-aminoquinolyl-N-hydroxysuccinimidyl carbamate - site K","synonyms":[{"name":"6-aminoquinolyl-N-hydroxysuccinimidyl carbamate","type":"related"},{"name":"AccQTag","type":"related"}],"termid":"MOD:01257"}


id: PBO:0001613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complexed with Cdc5 protein Cwf21","termid":"PBO:0001613"}


id: PR:Q09150
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A WD repeat-containing protein 61 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03420","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination protein rec14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32F12.02","secondary_identifiers":["UniProtKB:Q09150"],"synonyms":[{"name":"Spom972h-WDR61","type":"exact"}],"termid":"PR:Q09150"}


id: PBO:0085338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphoglucomutase, minor isoform; catalyzes the conversion from glucose-1-phosphate to glucose-6-phosphate, which is a key step in hexose metabolism; PGM1 has a paralog, PGM2, that arose from the whole genome duplication","termid":"PBO:0085338"}


id: MONDO:0020204
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm that affects the conjunctiva. Representative examples include papilloma, squamous cell carcinoma, and melanoma.","definition_xrefs":["NCIT:C2961"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conjunctival disorder","termid":"MONDO:0006170"},{"relation_name":"is_a","term_name":"eye neoplasm","termid":"MONDO:0021220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"conjunctival tumor","secondary_identifiers":["MEDGEN:3208","Orphanet:98616","UMLS:C0009761"],"synonyms":[{"name":"conjunctiva neoplasm","type":"exact"},{"name":"conjunctiva neoplasm (disease)","type":"exact"},{"name":"conjunctiva tumor","type":"exact"},{"name":"conjunctiva tumour","type":"exact"},{"name":"conjunctival neoplasm","type":"exact"},{"name":"conjunctival neoplasms","type":"exact"},{"name":"conjunctival tumor","type":"exact"},{"name":"neoplasm of conjunctiva","type":"exact"},{"name":"neoplasm of the conjunctiva","type":"exact"},{"name":"tumor of conjunctiva","type":"exact"},{"name":"tumor of the conjunctiva","type":"exact"},{"name":"tumour of conjunctiva","type":"exact"},{"name":"tumour of the conjunctiva","type":"exact"}],"termid":"MONDO:0020204","xrefs":{"Monarch":{"xref_id":"0020204"}}}


id: PBO:0053298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM zinc finger domain containing 4","termid":"PBO:0053298"}


id: MONDO:0001648
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Esophagitis resulting from Candida.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal esophagitis","termid":"MONDO:0001649"},{"relation_name":"is_a","term_name":"candidiasis","termid":"MONDO:0002026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"esophageal candidiasis","secondary_identifiers":["UMLS:C0239295","DOID:13146","ICD10CM:B37.81","MEDGEN:66784","ICD9:112.84","NCIT:C27027","SCTID:20639004"],"synonyms":[{"name":"Candida esophagitis","type":"exact"},{"name":"candidal esophagitis","type":"exact"},{"name":"candidiasis of the esophagus","type":"exact"},{"name":"candidiasis of the oesophagus","type":"exact"},{"name":"esophageal moniliasis","type":"exact"},{"name":"esophageal thrush","type":"exact"}],"termid":"MONDO:0001648","xrefs":{"Monarch":{"xref_id":"0001648"}}}


id: SO:0001154
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif of four consecutive peptide residues, of which the i+2 residue is proline, and that may contain one H-bond, which, if present, is between the main-chain CO of the first residue and the main-chain NH of the fourth and is characterized by the dihedral angles: Residue(i+1): phi ~ -120 degrees, psi ~ 120 degrees. Residue(i+2): phi ~ -60 degrees, psi ~ 0 degrees.","definition_xrefs":["PMID:2371257","SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta_turn_type_six","termid":"SO:0001150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"beta_turn_type_six_b","synonyms":[{"name":"beta turn type six b","type":"exact"},{"name":"type VIb beta turn","type":"exact"},{"name":"type VIb turn","type":"exact"}],"termid":"SO:0001154"}


id: FYPO:0005890
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is normal (i.e. indistinguishable from wild type) during a cellular response to calcium ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to nucleus during vegetative growth","termid":"FYPO:0000838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal protein localization to nucleus during cellular response to calcium ion","synonyms":[{"name":"normal protein localisation to nucleus during cellular response to calcium ion","type":"exact"},{"name":"normal protein localization to nucleus during cellular response to calcium","type":"exact"},{"name":"normal protein localization to nucleus during cellular response to calcium ion during mitotic cell cycle","type":"related"},{"name":"normal protein localization to nucleus during cellular response to calcium ion during vegetative growth","type":"exact"}],"termid":"FYPO:0005890"}


id: PBO:0067722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 20","termid":"PBO:0067722"}


id: PR:Q9Y7Z6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1539.02 gene.","definition_xrefs":["UniProtKB:Q9Y7Z6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic chromosome segregation protein C1539.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1539.02","synonyms":[{"name":"Spom972h-SPBC1539.02","type":"exact"}],"termid":"PR:Q9Y7Z6"}


id: PBO:0000175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"helicase C-terminal domain","termid":"PBO:0000175"}


id: PBO:0046284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EML2 antisense RNA 1","termid":"PBO:0046284"}


id: GO:0032356
data:
  {"annotated_genes":["SJAG_02261"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75301],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032357"}]},"cv_name":"molecular_function","definition":"Binding to a DNA region containing an oxidized residue.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"damaged DNA binding","termid":"GO:0003684"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02261":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003677"],"is_obsolete":false,"name":"oxidized DNA binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"oxidised DNA binding","type":"exact"}],"termid":"GO:0032356","terms_by_termid":{"GO:0032357":null}}


id: PBO:0055324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2752","termid":"PBO:0055324"}


id: MONDO:0021149
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disease characteristic","termid":"MONDO:0021125"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hereditary vs non-hereditary etiology","termid":"MONDO:0021149","xrefs":{"Monarch":{"xref_id":"0021149"}}}


id: PATO:0001890
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concave 3-D shape quality inhering in a bearer by virtue of the bearer's being divided into three branches.","definition_xrefs":["InfoVisual:InfoVisual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched","termid":"PATO:0000402"},{"relation_name":"is_a","term_name":"concave 3-D shape","termid":"PATO:0002008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite","synonyms":[{"name":"trifurcate","type":"exact"}],"termid":"PATO:0001890"}


id: PBO:0089632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsm2-8 complex subunit Lsm2","termid":"PBO:0089632"}


id: PBO:0059149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGUK p55 scaffold protein 1","termid":"PBO:0059149"}


id: GO:0071133
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha9-beta1 integrin complex bound to the transmembrane metallopeptidase ADAM8.","definition_xrefs":["PMID:16995821"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"alpha9-beta1 integrin-ADAM8 complex","synonyms":[{"name":"ITGA9-ITGB1-ADAM8 complex","type":"narrow"}],"termid":"GO:0071133"}


id: PBO:0074150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member D3","termid":"PBO:0074150"}


id: PBO:0078900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon CTG) 9-1","termid":"PBO:0078900"}


id: _global:existence_overlaps
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"x existence overlaps y if and only if either (a) the start of x is part of y or (b) the end of x is part of y. Formally: x existence starts and ends during y iff (α(x) >= α(y) & α(x) <= ω(y)) OR (ω(x) <= ω(y) & ω(x) >= α(y))","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"relation_between_physical_entity_and_a_process_or_stage","termid":"_global:relation_between_physical_entity_and_a_process_or_stage"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"existence_overlaps","secondary_identifiers":["RO:0002490"],"termid":"_global:existence_overlaps"}


id: GO:0061506
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of a DNA topological transformation by transiently cleaving a pair of complementary DNA strands to form a gate through which a second double-stranded DNA segment is passed, after which the severed strands in the first DNA segment are rejoined; product release is not coupled to ATP binding and hydrolysis; changes the linking number in multiples of 2.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA topoisomerase type II (ATP-independent) activity (obsolete GO:0061506)","termid":"GO:0061506"}


id: GO:0042597
data:
  {"annotated_genes":["SJAG_04067","SJAG_02093","SJAG_01970"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[104801],"is_not":false,"summary":null,"term":"GO:0042597"},{"annotations":[115189,115190],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030287"}]},"cv_name":"cellular_component","definition":"The region between the inner (cytoplasmic) and outer membrane (Gram-negative Bacteria) or cytoplasmic membrane and cell wall (Fungi and Gram-positive Bacteria).","definition_xrefs":["GOC:md","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01970":null,"SJAG_02093":null,"SJAG_04067":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"periplasmic space","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0005620"],"synonyms":[{"name":"periplasm","type":"exact"}],"termid":"GO:0042597","terms_by_termid":{"GO:0030287":null,"GO:0042597":null}}


id: PBO:0046602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K9, member 4","termid":"PBO:0046602"}


id: PBO:0063174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZ binding kinase","termid":"PBO:0063174"}


id: PBO:0058542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6088","termid":"PBO:0058542"}


id: PBO:0032722
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H4-K8_and_H4-K16_acetylation_at_subtelomere","termid":"PBO:0032722"}


id: PBO:0040292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1","termid":"PBO:0040292"}


id: PBO:0005858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S acidic ribosomal protein Rpp1-3","termid":"PBO:0005858"}


id: MONDO:0004448
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that arises from the ciliated respiratory mucosa that lines the frontal sinus. It results from the invagination and proliferation of epithelial cells in the underlying stroma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inverted papilloma","termid":"MONDO:0002537"},{"relation_name":"is_a","term_name":"frontal sinus Schneiderian papilloma","termid":"MONDO:0003752"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frontal sinus inverted papilloma","secondary_identifiers":["DOID:8060","NCIT:C6842","UMLS:C1333644","MEDGEN:272638"],"synonyms":[{"name":"frontal sinus inverted papilloma","type":"exact"},{"name":"inverted papilloma of frontal sinus","type":"exact"},{"name":"inverted papilloma of the frontal sinus","type":"exact"}],"termid":"MONDO:0004448","xrefs":{"Monarch":{"xref_id":"0004448"}}}


id: MONDO:0015730
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mosaic trisomy 17 is a rare chromosomal anomaly syndrome, with a highly variable clinical presentation, mostly characterized by growth delay, intellectual disability, body asymmetry with leg length differentiation, scoliosis, and congenital heart anomalies (e.g. ventricular septal defect). Prenatal ultrasound findings include intrauterine growth retardation, nuchal thickening brain anomalies (e.g. cerebellar hypoplasia), pleural effusion and single umbilical artery. Patients with no associated malformations have also been reported.","definition_xrefs":["Orphanet:1711"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 17 disorder","termid":"MONDO:0020583"},{"relation_name":"is_a","term_name":"trisomy","termid":"MONDO:0700065"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mosaic trisomy 17","secondary_identifiers":["NCIT:C37865","SCTID:764622004","MEDGEN:202107","UMLS:C1096168","MESH:C538044","GARD:5317"],"synonyms":[{"name":"Mosaic trisomy chromosome 17","type":"exact"},{"name":"Mosaic trisomy type 17","type":"exact"},{"name":"chromosome 17 duplication","type":"related"},{"name":"chromosome 17 trisomy","type":"related"},{"name":"chromosome 17, trisomy","type":"related"},{"name":"chromosome 17, trisomy mosaicism","type":"related"},{"name":"trisomy 17","type":"related"},{"name":"trisomy 17 mosaicism","type":"exact"}],"termid":"MONDO:0015730","xrefs":{"Monarch":{"xref_id":"0015730"}}}


id: PBO:0074690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 69","termid":"PBO:0074690"}


id: FYPO:0003647
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of sorbose into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased sorbose import","synonyms":[{"name":"decreased sorbose import across plasma membrane","type":"exact"},{"name":"decreased sorbose import during mitotic cell cycle","type":"related"},{"name":"decreased sorbose import during vegetative growth","type":"exact"},{"name":"decreased sorbose import into cell","type":"exact"},{"name":"decreased sorbose uptake","type":"exact"},{"name":"reduced sorbose import","type":"exact"}],"termid":"FYPO:0003647"}


id: PBO:0060077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 24","termid":"PBO:0060077"}


id: PBO:0011444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA (pseudouridine) methyltransferase Mra1","termid":"PBO:0011444"}


id: PR:Q9UUG2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC926.06c gene.","definition_xrefs":["UniProtKB:Q9UUG2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized leucine-rich repeat-containing protein C926.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC926.06c","synonyms":[{"name":"Spom972h-SPAC926.06c","type":"exact"}],"termid":"PR:Q9UUG2"}


id: PBO:0000171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-galactosyltransferase Gmh2 (predicted)","termid":"PBO:0000171"}


id: PBO:0053478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 449","termid":"PBO:0053478"}


id: MONDO:0022456
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankle defects short stature","termid":"MONDO:0022456","xrefs":{"Monarch":{"xref_id":"0022456"}}}


id: PBO:0081825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF747 divergent transcript","termid":"PBO:0081825"}


id: PBO:0088563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF2433 metallo phosphatase superfamily conserved fungal protein","termid":"PBO:0088563"}


id: PBO:0048507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth differentiation factor 7","termid":"PBO:0048507"}


id: PBO:0076987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP domain containing 5","termid":"PBO:0076987"}


id: GO:0032138
data:
  {"annotated_genes":["SJAG_02226","SJAG_00634"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107911],"is_not":false,"summary":null,"term":"GO:0032138"},{"annotations":[99995],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032141"}]},"cv_name":"molecular_function","definition":"Binding to a double-stranded DNA region containing a single base insertion or deletion.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA insertion or deletion binding","termid":"GO:0032135"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00634":null,"SJAG_02226":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003677","GO:0003674"],"is_obsolete":false,"name":"single base insertion or deletion binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"single base insertion binding","type":"narrow"}],"termid":"GO:0032138","terms_by_termid":{"GO:0032138":null,"GO:0032141":null}}


id: GO:0034817
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cis-9,10-dihydroanthracene-9,10-diol = 9,10-anthraquinone + 4 H+ + 4 e-.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cis-9,10-dihydroanthracene-9,10-diol dehydrogenase activity (obsolete GO:0034817)","termid":"GO:0034817"}


id: PBO:0042691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cat eye syndrome chromosome region, candidate 9","termid":"PBO:0042691"}


id: MOD:01287
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label -","definition_xrefs":["PubMed:15602776","Unimod:364#K","PubMed:11857757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bruker Daltonics SERVA-ICPL(TM) quantification chemistry, heavy form","termid":"MOD:00789"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bruker Daltonics SERVA-ICPL(TM) quantification chemistry, heavy form - site K","synonyms":[{"name":"Bruker Daltonics SERVA-ICPL(TM) quantification chemistry, heavy form","type":"related"},{"name":"ICPL:13C(6)","type":"related"}],"termid":"MOD:01287"}


id: GO:0018544
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4-carboxy-4'-sulfoazobenzene + 4 H+ + 4 e- = 4-aminobenzoate + 4-aminobenzenesulfonate.","definition_xrefs":["UM-BBD_reactionID:r0543"],"gene_count":0,"genotype_count":0,"name":"obsolete 4-carboxy-4'-sulfoazobenzene reductase activity (obsolete GO:0018544)","synonyms":[{"name":"4-carboxy-4'-sulphoazobenzene reductase activity","type":"exact"}],"termid":"GO:0018544"}


id: MOD:00488
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:116#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidized arginine biotinylated with biotin-LC-hydrazide","synonyms":[{"name":"OxArgBiotin","type":"related"},{"name":"Oxidized arginine biotinylated with biotin-LC-hydrazide","type":"related"}],"termid":"MOD:00488"}


id: PBO:0034554
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nucleosome_organization","termid":"PBO:0034554"}


id: GO:0021588
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the cerebellum. This process pertains to the initial formation of a structure from unspecified parts. The cerebellum is the portion of the brain in the back of the head between the cerebrum and the pons. The cerebellum controls balance for walking and standing, modulates the force and range of movement and is involved in the learning of motor skills.","definition_xrefs":["GOC:dph","GOC:jid","ISBN:0838580343","GOC:dgh","GOC:cls","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"hindbrain formation","termid":"GO:0021576"},{"relation_name":"part_of","term_name":"cerebellum morphogenesis","termid":"GO:0021587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellum formation","termid":"GO:0021588"}


id: GO:0046831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of RNA from the nucleus to the cytoplasm.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleobase-containing compound transport","termid":"GO:0032239"},{"relation_name":"is_a","term_name":"regulation of nucleocytoplasmic transport","termid":"GO:0046822"},{"relation_name":"regulates","term_name":"RNA export from nucleus","termid":"GO:0006405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0006913","GO:0008150"],"is_obsolete":false,"name":"regulation of RNA export from nucleus","synonyms":[{"name":"regulation of RNA export from cell nucleus","type":"exact"},{"name":"regulation of RNA export out of nucleus","type":"exact"},{"name":"regulation of RNA transport from nucleus to cytoplasm","type":"exact"},{"name":"regulation of RNA-nucleus export","type":"exact"}],"termid":"GO:0046831"}


id: GO:1903916
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of endoplasmic reticulum stress-induced eIF2alpha dephosphorylation.","definition_xrefs":["GO_REF:0000058","GOC:bf","GOC:TermGenie","GOC:PARL"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of endoplasmic reticulum stress-induced eIF2 alpha dephosphorylation (obsolete GO:1903916)","synonyms":[{"name":"regulation of ER stress-induced eIF2 alpha dephosphorylation","type":"exact"},{"name":"regulation of eIF2alpha dephosphorylation in response to ER stress","type":"exact"},{"name":"regulation of eIF2alpha dephosphorylation in response to endoplasmic reticulum stress","type":"exact"},{"name":"regulation of regulation of translation initiation by eIF2alpha dephosphorylation in response to endoplasmic reticulum stress","type":"exact"}],"termid":"GO:1903916"}


id: MONDO:0001749
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A senile cataract that involves the lens cortex.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"senile cataract","termid":"MONDO:0004847"},{"relation_name":"is_a","term_name":"cortical cataract","termid":"MONDO:0045051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cortical senile cataract","secondary_identifiers":["SCTID:78875003","UMLS:C0154980","ICD9:366.15","DOID:13574","MEDGEN:509748"],"synonyms":[{"name":"cortical senile cataract","type":"exact"},{"name":"lens cortex senile cataract","type":"exact"},{"name":"senile cataract of lens cortex","type":"exact"}],"termid":"MONDO:0001749","xrefs":{"Monarch":{"xref_id":"0001749"}}}


id: PBO:0008140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LEMD3 domain","termid":"PBO:0008140"}


id: GO:0033996
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-D-fructopyranosyl-(2->6)-[D-fructofuranosyl-(2->6)]n-D-fructofuranoside = beta-D-fructopyranosyl-(2->6)-[D-fructofuranosyl-(2->6)](n-1)-D-fructofuranoside + di-beta-D-fructofuranose 2,6':2',6-dianhydride. This reaction is the production of di-beta-D-fructofuranose 2,6':2',6-dianhydride (DFA IV) by successively eliminating the diminishing (2->6)-beta-D-fructan (levan) chain from the terminal D-fructosyl-D-fructosyl disaccharide.","definition_xrefs":["EC:4.2.2.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"levan fructotransferase (DFA-IV-forming) activity","secondary_identifiers":["MetaCyc:4.2.2.16-RXN"],"synonyms":[{"name":"2,6-beta-D-fructan D-fructosyl-D-fructosyltransferase (forming di-beta-D-fructofuranose 2,6':2',6-dianhydride) activity","type":"related"},{"name":"2,6-beta-D-fructan lyase (di-beta-D-fructofuranose-2,6':2',6-dianhydride-forming) activity","type":"related"},{"name":"levan fructotransferase activity","type":"related"}],"termid":"GO:0033996"}


id: MONDO:0018876
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mantle cell lymphoma is a rare form of malignant non-Hodgkin lymphoma affecting B lymphocytes in the lymph nodes in a region called the ``mantle zone''.","definition_xrefs":["Orphanet:52416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aggressive B-cell non-Hodgkin lymphoma","termid":"MONDO:0017595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"mantle cell lymphoma","secondary_identifiers":["EFO:1001469","DOID:0050746","ICD9:200.40","NCIT:C4337","NORD:1399","SCTID:443487006","ICDO:9673/3","MESH:D020522","GARD:6969","ICD10CM:C83.1","ONCOTREE:MCL","MEDGEN:1668377","icd11.foundation:1804127841","MedDRA:10061275","UMLS:C4721414"],"synonyms":[{"name":"LCM","type":"exact"},{"name":"MCL","type":"exact"},{"name":"classical mantle cell lymphoma","type":"exact"},{"name":"lymphoma, mantle cell","type":"related"},{"name":"mantle cell lymphoma","type":"exact"},{"name":"mantle zone lymphoma","type":"exact"}],"termid":"MONDO:0018876","xrefs":{"Monarch":{"xref_id":"0018876"}}}


id: PBO:0108727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleur exosome adaptor Mmi1","termid":"PBO:0108727"}


id: PBO:0024481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IMPACT domain protein, possible chaperone (predicted)","termid":"PBO:0024481"}


id: MONDO:0022512
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete atrial septal defect coronary sinus (obsolete MONDO:0022512)","termid":"MONDO:0022512","xrefs":{"Monarch":{"xref_id":"0022512"}}}


id: FYPO:0002172
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more RNAs that are normally expressed during nitrogen starvation measured in a cell is higher than normal (i.e. higher than observed in wild-type cells during vegetative growth).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased level of nitrogen starvation gene mRNA during vegetative growth","synonyms":[{"name":"increased level of cellular response to nitrogen starvation gene mRNA during vegetative growth","type":"exact"},{"name":"increased level of nitrogen depletion gene mRNA during vegetative growth","type":"exact"},{"name":"increased level of nitrogen deprivation gene mRNA during vegetative growth","type":"exact"},{"name":"increased level of nitrogen starvation gene RNA during vegetative growth","type":"exact"},{"name":"increased level of nitrogen starvation gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of nitrogen starvation gene transcripts during vegetative growth","type":"exact"},{"name":"increased nitrogen starvation gene mRNA accumulation during vegetative growth","type":"related"}],"termid":"FYPO:0002172"}


id: PBO:0040423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V0 subunit e1","termid":"PBO:0040423"}


id: GO:0097203
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The tip or margin of the progressing circular lamella that engulfs a particle during phagocytosis. When the two lips of the cup fuse it is converted into a phagosome.","definition_xrefs":["PMID:20200225","GOC:pf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"phagocytic cup","termid":"GO:0001891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"phagocytic cup lip","termid":"GO:0097203"}


id: GO:0016115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of terpenoids, any member of a class of compounds characterized by an isoprenoid chemical structure.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid metabolic process","termid":"GO:0006721"},{"relation_name":"is_a","term_name":"isoprenoid catabolic process","termid":"GO:0008300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"terpenoid catabolic process","synonyms":[{"name":"terpenoid breakdown","type":"exact"},{"name":"terpenoid catabolism","type":"exact"},{"name":"terpenoid degradation","type":"exact"}],"termid":"GO:0016115"}


id: PBO:0003230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kip3 subfamily","termid":"PBO:0003230"}


id: MONDO:0006095
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoid tumor characterized by a high mitotic rate, often associated with the presence of necrosis and nuclear pleomorphism.","definition_xrefs":["NCIT:C72074"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoid tumor","termid":"MONDO:0005369"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atypical carcinoid tumor","secondary_identifiers":["UMLS:C1266032","EFO:1000097","SCTID:445238008","MEDGEN:226834"],"synonyms":[{"name":"atypical carcinoid tumor","type":"exact"},{"name":"malignant carcinoid tumor","type":"exact"},{"name":"malignant carcinoid tumour","type":"exact"}],"termid":"MONDO:0006095","xrefs":{"Monarch":{"xref_id":"0006095"}}}


id: GO:0140765
data:
  {"annotated_genes":["SJAG_04039"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91869],"is_not":false,"summary":null,"term":"GO:0140765"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H3 N6-acetyl-L-lysine (position 56) + NAD+ + H2O = histone H3 L-lysine (position 56) + 2''-O-acetyl-ADP-D-ribose + nicotinamide. This reaction transfers an acetyl group attached to a lysine residue in H3K56 to NAD, producing nicotinamide.","definition_xrefs":["PMID:23911928","PMID:30374165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone deacetylase activity, NAD-dependent","termid":"GO:0017136"},{"relation_name":"is_a","term_name":"histone H3K deacetylase activity","termid":"GO:0141050"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04039":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0033558"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0140096","GO:0016740","GO:0003824","GO:0033558","GO:0019213"],"is_obsolete":false,"name":"histone H3K56 deacetylase activity, NAD-dependent","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"NAD-dependent histone H3-K56 deacetylase activity","type":"exact"},{"name":"NAD-dependent histone H3K56 deacetylase activity","type":"exact"},{"name":"NAD-dependent histone deacetylase activity (H3-K56 specific)","type":"exact"}],"termid":"GO:0140765","terms_by_termid":{"GO:0140765":null}}


id: PBO:0003594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3 h3.2","termid":"PBO:0003594"}


id: GO:0004455
data:
  {"annotated_genes":["SJAG_00396"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78774],"is_not":false,"summary":null,"term":"GO:0004455"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-2,3-dihydroxy-3-methylbutanoate + NADP+ = (S)-2-hydroxy-2-methyl-3-oxobutanoate + NADPH + H+.","definition_xrefs":["EC:1.1.1.86"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00396":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"ketol-acid reductoisomerase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:ACETOLACTREDUCTOISOM-RXN","RHEA:22068"],"synonyms":[{"name":"(R)-2,3-dihydroxy-3-methylbutanoate:NADP+ oxidoreductase (isomerizing)","type":"related"},{"name":"2-hydroxy-3-keto acid reductoisomerase activity","type":"related"},{"name":"acetohydroxy acid isomeroreductase activity","type":"related"},{"name":"acetohydroxy acid reductoisomerase activity","type":"related"},{"name":"acetolactate reductoisomerase activity","type":"related"},{"name":"alpha-keto-beta-hydroxylacyl reductoisomerase activity","type":"related"},{"name":"dihydroxyisovalerate (isomerizing) dehydrogenase activity","type":"related"},{"name":"dihydroxyisovalerate dehydrogenase (isomerizing) activity","type":"related"},{"name":"isomeroreductase activity","type":"related"},{"name":"ketol acid reductoisomerase activity","type":"related"},{"name":"reductoisomerase activity","type":"related"}],"termid":"GO:0004455","terms_by_termid":{"GO:0004455":null}}


id: GO:0047442
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 17alpha-hydroxyprogesterone + O2 + reduced NADPH--hemoprotein reductase = acetate + androst-4-ene-3,17-dione + 2 H+ + H2O + oxidized NADPH--hemoprotein reductase.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 17-alpha-hydroxyprogesterone aldolase activity (obsolete GO:0047442)","termid":"GO:0047442"}


id: PBO:0046215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 8","termid":"PBO:0046215"}


id: PBO:0029867
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K56_acetylation_in_transcribed_regions","termid":"PBO:0029867"}


id: PBO:0045213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C6","termid":"PBO:0045213"}


id: GO:1900077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to insulin stimulus.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of cellular response to insulin stimulus","termid":"GO:1900076"},{"relation_name":"negatively_regulates","term_name":"cellular response to insulin stimulus","termid":"GO:0032869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular response to insulin stimulus","synonyms":[{"name":"down regulation of cellular response to insulin stimulus","type":"exact"},{"name":"down-regulation of cellular response to insulin stimulus","type":"exact"},{"name":"downregulation of cellular response to insulin stimulus","type":"exact"},{"name":"inhibition of cellular response to insulin stimulus","type":"narrow"}],"termid":"GO:1900077"}


id: FYPO:0002507
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the palmitoylation of one or more specific proteins, or of specific protein sites, does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein modification during vegetative growth","termid":"FYPO:0000544"},{"relation_name":"is_a","term_name":"abolished protein palmitoylation","termid":"FYPO:0002504"},{"relation_name":"is_a","term_name":"abnormal protein palmitoylation during vegetative growth","termid":"FYPO:0002506"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0002274","FYPO:0001985","FYPO:0001320","FYPO:0002494"],"is_obsolete":false,"name":"abolished protein palmitoylation during vegetative growth","synonyms":[{"name":"abolished protein palmitoylation during mitotic cell cycle","type":"related"},{"name":"protein palmitoylation abolished during vegetative growth","type":"exact"},{"name":"protein palmitoylation absent during vegetative growth","type":"exact"}],"termid":"FYPO:0002507"}


id: PBO:0080580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WDR5 divergent transcript","termid":"PBO:0080580"}


id: MONDO:0002564
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm that affects the wall of the jejunum. Representative examples include adenoma, carcinoma, and lymphoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small intestine neoplasm","termid":"MONDO:0004251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"jejunal neoplasm","secondary_identifiers":["MEDGEN:7187","MESH:D007580","SCTID:126834003","UMLS:C0022374","NCIT:C8401","DOID:3218"],"synonyms":[{"name":"jejunal tumor","type":"exact"},{"name":"jejunal tumour","type":"exact"},{"name":"jejunum neoplasm","type":"exact"},{"name":"jejunum neoplasm (disease)","type":"exact"},{"name":"jejunum tumor","type":"exact"},{"name":"jejunum tumour","type":"exact"},{"name":"neoplasm of jejunum","type":"exact"},{"name":"neoplasm of the jejunum","type":"exact"},{"name":"tumor of jejunum","type":"exact"},{"name":"tumor of the jejunum","type":"exact"},{"name":"tumour of jejunum","type":"exact"},{"name":"tumour of the jejunum","type":"exact"}],"termid":"MONDO:0002564","xrefs":{"Monarch":{"xref_id":"0002564"}}}


id: GO:1903897
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the PERK-mediated unfolded protein response.","definition_xrefs":["GOC:PARL","PMID:22013210","GO_REF:0000058","GOC:TermGenie","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endoplasmic reticulum unfolded protein response","termid":"GO:1900101"},{"relation_name":"regulates","term_name":"PERK-mediated unfolded protein response","termid":"GO:0036499"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of PERK-mediated unfolded protein response","synonyms":[{"name":"regulation of EIF2AK3-mediated unfolded protein response","type":"related"},{"name":"regulation of PERK branch of UPR","type":"exact"},{"name":"regulation of PERK signal transduction pathway","type":"broad"},{"name":"regulation of PERK signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"regulation of PKR-like ER kinase signal transduction","type":"exact"},{"name":"regulation of UPR signaling by PERK stress sensor","type":"exact"},{"name":"regulation of endoplasmic reticulum unfolded protein response; PERK signaling","type":"exact"}],"termid":"GO:1903897"}


id: GO:0005108
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete transmembrane ephrin (obsolete GO:0005108)","synonyms":[{"name":"transmembrane ephrin","type":"exact"}],"termid":"GO:0005108"}


id: MONDO:0004017
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"malignant pineal area germ cell neoplasm","termid":"MONDO:0002073"},{"relation_name":"is_a","term_name":"malignant teratoma","termid":"MONDO:0003514"},{"relation_name":"is_a","term_name":"extragonadal nonseminomatous germ cell tumor","termid":"MONDO:0003578"},{"relation_name":"is_a","term_name":"central nervous system immature teratoma","termid":"MONDO:0003735"},{"relation_name":"is_a","term_name":"pineal region teratoma","termid":"MONDO:0004015"},{"relation_name":"is_a","term_name":"immature teratoma","termid":"MONDO:0024746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pineal region immature teratoma","secondary_identifiers":["DOID:6858","MEDGEN:277516","NCIT:C6755","UMLS:C1335416"],"synonyms":[{"name":"atypical pineal teratoma","type":"exact"},{"name":"immature teratoma of pineal area","type":"exact"},{"name":"immature teratoma of pineal region","type":"exact"},{"name":"immature teratoma of the pineal area","type":"exact"},{"name":"immature teratoma of the pineal region","type":"exact"},{"name":"pineal area immature teratoma","type":"exact"}],"termid":"MONDO:0004017","xrefs":{"Monarch":{"xref_id":"0004017"}}}


id: SO:0001638
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes for an piwi associated RNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sncRNA_gene","termid":"SO:0002342"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piRNA_gene","synonyms":[{"name":"piRNA gene","type":"exact"}],"termid":"SO:0001638"}


id: GO:0075259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a spore-bearing structure over time, from its formation to the mature structure. A spore-bearing structure is an anatomical structure that produces new spores.","definition_xrefs":["GOC:mcc","GOC:pamgo_curators","GOC:di","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive structure development","termid":"GO:0048608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spore-bearing structure development","synonyms":[{"name":"fruiting structure development","type":"exact"},{"name":"sporangium development","type":"broad"},{"name":"spore-bearing organ development","type":"related"},{"name":"sporophore development","type":"exact"}],"termid":"GO:0075259"}


id: PBO:0080336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 100 pseudogene","termid":"PBO:0080336"}


id: MONDO:0859159
data:
  {"annotated_genes":["SJAG_01544"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88337],"is_not":false,"summary":null,"term":"MONDO:0859159"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01544":null},"genotype_count":0,"is_obsolete":false,"name":"deafness, cataract, impaired intellectual development, and polyneuropathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:619354","MEDGEN:1781637","UMLS:C5543482"],"termid":"MONDO:0859159","terms_by_termid":{"MONDO:0859159":null},"xrefs":{"Monarch":{"xref_id":"0859159"}}}


id: GO:0102054
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-maleylpyruvate(2-) + H2O = H+ + maleate(2-) + pyruvate.","definition_xrefs":["PMID:7400101","GOC:pz","RHEA:47956"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","termid":"GO:0016823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"maleylpyruvate hydrolase activity","secondary_identifiers":["MetaCyc:RXN-10447","EC:3.7.1.23"],"termid":"GO:0102054"}


id: PBO:0057496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 614","termid":"PBO:0057496"}


id: MONDO:0010853
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Helicobacter pylori infection, susceptibility to","secondary_identifiers":["OMIM:600263","UMLS:C1838332","MEDGEN:325004"],"synonyms":[{"name":"H. pylori infection, susceptibility to","type":"exact"},{"name":"Helicobacter pylori infection, susceptibility to","type":"exact"}],"termid":"MONDO:0010853","xrefs":{"Monarch":{"xref_id":"0010853"}}}


id: PBO:0035859
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-short_astral_microtubules","termid":"PBO:0035859"}


id: GO:0000122
data:
  {"annotated_genes":["SJAG_02104","SJAG_02752","SJAG_03081","SJAG_00290","SJAG_01230","SJAG_03143","SJAG_04539","SJAG_00861","SJAG_00441","SJAG_00124","SJAG_04312","SJAG_02048","SJAG_01000","SJAG_02846","SJAG_01680","SJAG_01157","SJAG_04039","SJAG_05343","SJAG_03319","SJAG_02981","SJAG_00802","SJAG_01804","SJAG_04607","SJAG_04026","SJAG_02730","SJAG_04268","SJAG_04381","SJAG_02385","SJAG_01199","SJAG_01728","SJAG_01254","SJAG_00987","SJAG_02255","SJAG_01799","SJAG_04921","SJAG_04249","SJAG_00926","SJAG_04613","SJAG_03473","SJAG_00969","SJAG_04584","SJAG_03067","SJAG_00410","SJAG_00996","SJAG_00163","SJAG_02444","SJAG_03845","SJAG_00792","SJAG_00142","SJAG_02858","SJAG_01311","SJAG_00266"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[58371,61783,71838,72272,73622,74156,74964,75413,75543,75769,76042,77083,78497,78880,81336,82204,89407,92997,93069,93951,93973,95107,95206,95553,95696,96040,96455,96539,98104,100702,102819,103670,105376,105777,106082,107641,107737,108083,108332,108564,108584,109812,110073,110413,110858,112574,113000,113947,114832,115690,116125,119236],"is_not":false,"summary":null,"term":"GO:0000122"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of transcription mediated by RNA polymerase II.","definition_xrefs":["GOC:txnOH","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transcription by RNA polymerase II","termid":"GO:0006357"},{"relation_name":"is_a","term_name":"negative regulation of DNA-templated transcription","termid":"GO:0045892"},{"relation_name":"negatively_regulates","term_name":"transcription by RNA polymerase II","termid":"GO:0006366"}],"gene_count":52,"genes_by_uniquename":{"SJAG_00124":null,"SJAG_00142":null,"SJAG_00163":null,"SJAG_00266":null,"SJAG_00290":null,"SJAG_00410":null,"SJAG_00441":null,"SJAG_00792":null,"SJAG_00802":null,"SJAG_00861":null,"SJAG_00926":null,"SJAG_00969":null,"SJAG_00987":null,"SJAG_00996":null,"SJAG_01000":null,"SJAG_01157":null,"SJAG_01199":null,"SJAG_01230":null,"SJAG_01254":null,"SJAG_01311":null,"SJAG_01680":null,"SJAG_01728":null,"SJAG_01799":null,"SJAG_01804":null,"SJAG_02048":null,"SJAG_02104":null,"SJAG_02255":null,"SJAG_02385":null,"SJAG_02444":null,"SJAG_02730":null,"SJAG_02752":null,"SJAG_02846":null,"SJAG_02858":null,"SJAG_02981":null,"SJAG_03067":null,"SJAG_03081":null,"SJAG_03143":null,"SJAG_03319":null,"SJAG_03473":null,"SJAG_03845":null,"SJAG_04026":null,"SJAG_04039":null,"SJAG_04249":null,"SJAG_04268":null,"SJAG_04312":null,"SJAG_04381":null,"SJAG_04539":null,"SJAG_04584":null,"SJAG_04607":null,"SJAG_04613":null,"SJAG_04921":null,"SJAG_05343":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006355","GO:0006351","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of transcription by RNA polymerase II","references_by_uniquename":{"GO_REF:0000024":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:0045816","GO:0010553","Reactome:R-HSA-2173795","Reactome:R-HSA-8866904"],"synonyms":[{"name":"down regulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"down regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"down-regulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"down-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"downregulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"downregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"inhibition of global transcription from RNA polymerase II promoter","type":"related"},{"name":"inhibition of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of gene-specific transcription from RNA polymerase II promoter","type":"related"},{"name":"negative regulation of global transcription from Pol II promoter","type":"related"},{"name":"negative regulation of transcription from Pol II promoter","type":"exact"},{"name":"negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of transcription from RNA polymerase II promoter, global","type":"related"}],"termid":"GO:0000122","terms_by_termid":{"GO:0000122":null}}


id: PR:O74435
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A centrin-3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04288","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division control protein 31 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1682.04","secondary_identifiers":["UniProtKB:O74435"],"synonyms":[{"name":"Spom972h-CETN3","type":"exact"}],"termid":"PR:O74435"}


id: GO:0071358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a type III interferon stimulus. Interferon lambda is the only member of the type III interferon found so far.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to type III interferon","termid":"GO:0034342"},{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to type III interferon","synonyms":[{"name":"cellular response to interferon-lambda","type":"narrow"},{"name":"cellular response to type III IFN","type":"exact"}],"termid":"GO:0071358"}


id: MONDO:0043459
data:
  {"annotated_genes":["SJAG_00995","SJAG_03206","SJAG_01207"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88826],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011125"},{"annotations":[87077],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014615"},{"annotations":[87078],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014619"}]},"cv_name":"mondo","definition":"A non-neoplastic or neoplastic disorder which results from exposure to radiation. Examples of non-neoplastic disorders include dermatitis, enteritis, stomatitis, pneumonitis, and cerebritis. Examples of neoplastic disorders include myelodysplastic syndromes, leukemias, and sarcomas.","definition_xrefs":["NCIT:C26684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"human disease","termid":"MONDO:0700096"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00995":null,"SJAG_01207":null,"SJAG_03206":null},"genotype_count":0,"is_obsolete":false,"name":"radiation-induced disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:521132","SCTID:85983004","MEDGEN:734320","UMLS:C1527225","EFO:0009565","GARD:22139","MESH:D000016"],"synonyms":[{"name":"Abnormality, radiation-induced","type":"related"},{"name":"abnormalities, radiation induced","type":"related"},{"name":"radiation induced abnormalities","type":"related"},{"name":"radiation-induced Abnormality","type":"exact"},{"name":"radiation-induced abnormalities","type":"exact"},{"name":"radiation-induced disorder","type":"exact"}],"termid":"MONDO:0043459","terms_by_termid":{"MONDO:0011125":null,"MONDO:0014615":null,"MONDO:0014619":null},"xrefs":{"Monarch":{"xref_id":"0043459"}}}


id: MONDO:0010943
data:
  {"annotated_genes":["SJAG_01903"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89101],"is_not":false,"summary":null,"term":"MONDO:0010943"}]},"cv_name":"mondo","definition":"A schizophrenia that has material basis in an autosomal dominant mutation of PRODH on chromosome 22q11.21.","definition_xrefs":["DOID:0070080"],"direct_ancestors":[{"relation_name":"is_a","term_name":"schizophrenia, susceptibility to","termid":"MONDO:0100182"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01903":null},"genotype_count":0,"is_obsolete":false,"name":"schizophrenia 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:371517","OMIM:600850","UMLS:C1833247"],"synonyms":[{"name":"SCZD4","type":"exact"},{"name":"schizophrenia 4","type":"exact"},{"name":"schizophrenia susceptibility locus, chromosome 22Q11-related","type":"related"},{"name":"schizophrenia type 4","type":"exact"},{"name":"schizophrenia, susceptibility to, 4","type":"exact"}],"termid":"MONDO:0010943","terms_by_termid":{"MONDO:0010943":null},"xrefs":{"Monarch":{"xref_id":"0010943"}}}


id: MONDO:0017771
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spectrum of Mullerian duct anomalies characterized by congenital aplasia of the uterus and upper 2/3 of the vagina in otherwise phenotypically normal females. It can be classified as either MRKH syndrome type 1 (corresponding to isolated utero-vaginal aplasia) or MRKH syndrome type 2 (utero-vaginal aplasia associated with other malformations).","definition_xrefs":["Orphanet:3109"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"partial bilateral aplasia of the mullerian ducts","termid":"MONDO:0015830"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mayer-Rokitansky-Kuster-Hauser syndrome","secondary_identifiers":["MEDGEN:140915","NCIT:C124853","UMLS:C0431648","SCTID:8793008","GARD:5445","DOID:0112177","MedDRA:10065148","NORD:1412"],"synonyms":[{"name":"MRKH","type":"exact"},{"name":"MRKH syndrome","type":"exact"},{"name":"Mayer-Rokitansky-Küster-Hauser Syndrome","type":"exact"},{"name":"Mayer-Rokitansky-Küster-Hauser syndrome","type":"related"},{"name":"Mullerian aplasia/dysgenesis","type":"exact"},{"name":"Rokitansky Kuster Hauser syndrome","type":"exact"},{"name":"Rokitansky syndrome","type":"exact"}],"termid":"MONDO:0017771","xrefs":{"Monarch":{"xref_id":"0017771"}}}


id: RO:0002494
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x transformation of y if x is the immediate transformation of y, or is linked to y through a chain of transformation relationships","direct_ancestors":[{"relation_name":"is_a","term_name":"develops_from","termid":"RO:0002202"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transformation_of","termid":"RO:0002494"}


id: PBO:0059143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannose phosphate isomerase","termid":"PBO:0059143"}


id: PBO:0088036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-binding protein of unknown function; contains one WD40 repeat in a beta-propeller fold; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; homolog of human WDR48/UAF1, which is involved in regulating the Fanconi anemia pathway; deletion mutant is sensitive to various chemicals including phenanthroline, sanguinarine, and nordihydroguaiaretic acid","termid":"PBO:0088036"}


id: MONDO:0020488
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Atypical progressive supranuclear palsy (atypical PSP) is a group of clinical syndromes associated with underlying PSP-tau pathology, that do not conform to the classic presentation of PSP (Richardson syndrome), a rare late-onset neurodegenerative disease. The group comprises PSP-Parkinsonism (PSP-P), PSP-Pure akinesia with gait freezing (PSP-PAGF), PSP-corticobasal syndrome (PSP-CBS) and PSP-progressive non fluent aphasia (PSP-PNFA).","definition_xrefs":["Orphanet:99750"],"direct_ancestors":[{"relation_name":"is_a","term_name":"progressive supranuclear palsy","termid":"MONDO:0019037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"atypical progressive supranuclear palsy syndrome","secondary_identifiers":["MEDGEN:1779597","UMLS:C5548371","GARD:4507"],"synonyms":[{"name":"atypical PSP syndrome","type":"exact"}],"termid":"MONDO:0020488","xrefs":{"Monarch":{"xref_id":"0020488"}}}


id: GO:0032748
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-24 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-24 production","termid":"GO:0032668"},{"relation_name":"positively_regulates","term_name":"interleukin-24 production","termid":"GO:0032628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of interleukin-24 production","secondary_identifiers":["GO:0045536"],"synonyms":[{"name":"activation of interleukin-24 production","type":"narrow"},{"name":"positive regulation of IL-24 production","type":"exact"},{"name":"positive regulation of interleukin-24 biosynthetic process","type":"narrow"},{"name":"stimulation of interleukin-24 production","type":"narrow"},{"name":"up regulation of interleukin-24 production","type":"exact"},{"name":"up-regulation of interleukin-24 production","type":"exact"},{"name":"upregulation of interleukin-24 production","type":"exact"}],"termid":"GO:0032748"}


id: FYPO:0008208
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the neddylation of one or more specific proteins, or of specific protein sites, is abolished.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein neddylation during vegetative growth","termid":"FYPO:0005819"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0002274","FYPO:0001320","FYPO:0002494","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein neddylation during vegetative growth","termid":"FYPO:0008208"}


id: PBO:0069817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1103, pseudogene","termid":"PBO:0069817"}


id: MONDO:0032621
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex I deficiency, nuclear type","termid":"MONDO:0100223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial complex 1 deficiency, nuclear type 16","secondary_identifiers":["MEDGEN:1648351","DOID:0112096","GARD:16324","UMLS:C4748785","OMIM:618238"],"synonyms":[{"name":"MC1DN16","type":"related"},{"name":"MITOCHONDRIAL COMPLEX I DEFICIENCY, NUCLEAR TYPE 16","type":"related"}],"termid":"MONDO:0032621","xrefs":{"Monarch":{"xref_id":"0032621"}}}


id: MONDO:0006159
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A gastrointestinal stromal tumor that arises from the colon or rectum. The majority of cases have spindle cell morphology. Gastrointestinal stromal tumors of the colon are usually advanced upon detection and tend to have a poor prognosis; gastrointestinal stromal tumors of the rectum usually have an aggressive clinical course.","definition_xrefs":["NCIT:C27735"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colorectal neoplasm","termid":"MONDO:0005335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"colorectal gastrointestinal stromal tumor","secondary_identifiers":["EFO:1000192","MEDGEN:272496","UMLS:C1333109"],"synonyms":[{"name":"colorectal (colon or rectal) gastrointestinal stromal tumor (gist)","type":"exact"},{"name":"colorectal (colon or rectal) gastrointestinal stromal tumour (gist)","type":"exact"},{"name":"colorectal gastrointestinal stromal tumor","type":"exact"},{"name":"colorectal gastrointestinal stromal tumor (gist)","type":"exact"},{"name":"colorectal gastrointestinal stromal tumour (gist)","type":"exact"},{"name":"colorectal gist","type":"exact"}],"termid":"MONDO:0006159","xrefs":{"Monarch":{"xref_id":"0006159"}}}


id: PBO:0051975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IZUMO family member 2","termid":"PBO:0051975"}


id: PBO:0062108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily C member 6","termid":"PBO:0062108"}


id: PR:O14165
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pseudouridine-5'-phosphatase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C4C5.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4C5.01","secondary_identifiers":["UniProtKB:O14165"],"synonyms":[{"name":"Spom972h-HDHD1","type":"exact"}],"termid":"PR:O14165"}


id: PBO:0000197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitin synthase I","termid":"PBO:0000197"}


id: PBO:0083901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Flap-structured DNA-binding and RNA-binding protein; stimulates deadenylation-dependent mRNA degradation mediated by the CCR4-NOT deadenylase complex; member of the Smaug (Smg) family of post-transcriptional regulators which bind RNA through a conserved sterile alpha motif (SAM) domain that interacts with Smg recognition element (SREs) containing transcripts; stimulates Dna2p endonuclease activity; forms [SMAUG+] prion","termid":"PBO:0083901"}


id: MOD:00905
data:
  {"annotated_genes":["SJAG_00288","SJAG_00096","SJAG_00254","SJAG_00109","SJAG_04953","SJAG_04125","SJAG_01626","SJAG_00827","SJAG_02827","SJAG_04238","SJAG_02388","SJAG_02694","SJAG_00784","SJAG_04789","SJAG_04553","SJAG_01162","SJAG_02489","SJAG_02435","SJAG_02504","SJAG_03290","SJAG_01970","SJAG_02260","SJAG_03032","SJAG_04067","SJAG_01029"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[82259],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00793"},{"annotations":[82303,82338,82390,82361,82384,82450,82371,82377,82388,82304,82333,82344,82383,82385,82230,82243,82244,82372,82331,82389,82339,82373,82484,82285,82324,82353,82209,82231,82255,82286,82245,82213,82268,82229,82232,82365,82410,82284,82530,82409,82387,82332,82340,82467,82323],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00689"}]},"cv_name":"PSI-MOD","definition":"A protein modification that modifies an L-cysteine residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00096":null,"SJAG_00109":null,"SJAG_00254":null,"SJAG_00288":null,"SJAG_00784":null,"SJAG_00827":null,"SJAG_01029":null,"SJAG_01162":null,"SJAG_01626":null,"SJAG_01970":null,"SJAG_02260":null,"SJAG_02388":null,"SJAG_02435":null,"SJAG_02489":null,"SJAG_02504":null,"SJAG_02694":null,"SJAG_02827":null,"SJAG_03032":null,"SJAG_03290":null,"SJAG_04067":null,"SJAG_04125":null,"SJAG_04238":null,"SJAG_04553":null,"SJAG_04789":null,"SJAG_04953":null},"genotype_count":0,"is_obsolete":false,"name":"modified L-cysteine residue","references_by_uniquename":{"PMID:36408920":null},"synonyms":[{"name":"ModCys","type":"exact"}],"termid":"MOD:00905","terms_by_termid":{"MOD:00689":null,"MOD:00793":null}}


id: MONDO:0004697
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare condition that usually affects the middle-to-distal esophagus in middle-aged and elderly people. There is usually a history of tobacco smoking or alcohol intake. Dysphagia is the presenting symptom. Morphologically, the lesions are well-demarcated and are characterized by epithelial hyperplasia, thickened basal layer, prominent granular cell layer, and hyperorthokeratosis. In a minority of patients this condition is associated with adjacent high-grade squamous dysplasia and/or squamous cell carcinoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"esophageal disorder","termid":"MONDO:0003749"},{"relation_name":"is_a","term_name":"leukoplakia","termid":"MONDO:0043243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"esophageal leukoplakia","secondary_identifiers":["HP:0012859","ICD9:530.83","SCTID:89057003","NCIT:C3953","UMLS:C0267095","DOID:9021","MEDGEN:75628"],"synonyms":[{"name":"esophageal epidermoid metaplasia","type":"exact"},{"name":"esophageal leukoplakia","type":"exact"},{"name":"esophageal leukoplakia (disease)","type":"exact"},{"name":"esophagus leukoplakia","type":"exact"},{"name":"leukoplakia of esophagus","type":"exact"},{"name":"leukoplakia of oesophagus","type":"exact"},{"name":"leukoplakia of the esophagus","type":"exact"},{"name":"leukoplakia of the oesophagus","type":"exact"},{"name":"oesophagus leukoplakia","type":"exact"}],"termid":"MONDO:0004697","xrefs":{"Monarch":{"xref_id":"0004697"}}}


id: MONDO:0032744
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 37","secondary_identifiers":["MEDGEN:1677534","UMLS:C5193091","OMIM:618429","DOID:0111927","GARD:18408"],"synonyms":[{"name":"SPERMATOGENIC FAILURE 37","type":"related"},{"name":"SPGF37","type":"related"}],"termid":"MONDO:0032744","xrefs":{"Monarch":{"xref_id":"0032744"}}}


id: CHEBI:142517
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"A benzoate ester resulting from the formal condensation of the carboxy group of vanillic acid with the hydroxy group of (−)-borneol. A metabolite isolated from Ferula dissecta.","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tschimganine","termid":"CHEBI:142517"}


id: PR:P78831
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ght5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P78831"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high-affinity glucose transporter ght5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1235.14","synonyms":[{"name":"Spom972h-ght5","type":"exact"},{"name":"hexose transporter 5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78831"}


id: GO:1904345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of gastric mucosal blood circulation.","definition_xrefs":["GOC:TermGenie","PMID:10807413","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of blood circulation","termid":"GO:1903523"},{"relation_name":"is_a","term_name":"regulation of gastric mucosal blood circulation","termid":"GO:1904344"},{"relation_name":"negatively_regulates","term_name":"gastric mucosal blood circulation","termid":"GO:1990768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of gastric mucosal blood circulation","synonyms":[{"name":"down regulation of gastric mucosal blood circulation","type":"exact"},{"name":"down regulation of stomach mucosal blood circulation","type":"exact"},{"name":"down-regulation of gastric mucosal blood circulation","type":"exact"},{"name":"down-regulation of stomach mucosal blood circulation","type":"exact"},{"name":"downregulation of gastric mucosal blood circulation","type":"exact"},{"name":"downregulation of stomach mucosal blood circulation","type":"exact"},{"name":"inhibition of gastric mucosal blood circulation","type":"narrow"},{"name":"inhibition of stomach mucosal blood circulation","type":"narrow"},{"name":"negative regulation of stomach mucosal blood circulation","type":"exact"}],"termid":"GO:1904345"}


id: PBO:0067370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 471, pseudogene","termid":"PBO:0067370"}


id: PBO:0088002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ty1 enhancer activator involved in Ty enhancer-mediated transcription; required for full levels of Ty enhancer-mediated transcription; C6 zinc cluster DNA-binding protein","termid":"PBO:0088002"}


id: GO:0002511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Receptor editing occurring in B cells in the bone marrow.","definition_xrefs":["GOC:jal","PMID:16460922"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell receptor editing","termid":"GO:0002452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0006259","GO:0006310","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"central B cell receptor editing","synonyms":[{"name":"central B lymphocyte receptor editing","type":"exact"},{"name":"central B-cell receptor editing","type":"exact"},{"name":"central B-lymphocyte receptor editing","type":"exact"}],"termid":"GO:0002511"}


id: GO:0140612
data:
  {"annotated_genes":["SJAG_02708","SJAG_01620","SJAG_01410","SJAG_02187","SJAG_02748","SJAG_01419","SJAG_01807","SJAG_00757","SJAG_02267","SJAG_02226"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58170,59229,64204,65119,60768,68988,65795,60387,62031,57122],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140664"}]},"cv_name":"molecular_function","definition":"A molecule that recognises toxic DNA structures, for example, double-strand breaks or collapsed replication forks, and initiates a signaling response.","definition_xrefs":["PMID:31995034"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular sensor activity","termid":"GO:0140299"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00757":null,"SJAG_01410":null,"SJAG_01419":null,"SJAG_01620":null,"SJAG_01807":null,"SJAG_02187":null,"SJAG_02226":null,"SJAG_02267":null,"SJAG_02708":null,"SJAG_02748":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140299"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0140299"],"is_obsolete":false,"name":"DNA damage sensor activity","references_by_uniquename":{"GO_REF:0000002":null},"synonyms":[{"name":"DNA damage sensing activity","type":"exact"}],"termid":"GO:0140612","terms_by_termid":{"GO:0140664":null}}


id: PBO:0030943
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_microtubule_depolymerization","termid":"PBO:0030943"}


id: GO:0018981
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving triethanolamine, a combustible, hygroscopic, colorless liquid commonly used in dry-cleaning solutions, cosmetics, detergents, textile processing, wool scouring, and as a corrosion inhibitor and pharmaceutical alkalizing agent.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete triethanolamine metabolic process (obsolete GO:0018981)","synonyms":[{"name":"triethanolamine metabolism","type":"exact"}],"termid":"GO:0018981"}


id: GO:0010303
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1,6)-alpha-D-glucosidic linkages in alpha- and beta-limit dextrins of amylopectin and glycogen, and in amylopectin and pullulan.","definition_xrefs":["EC:3.2.1.142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016798","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"limit dextrinase activity","secondary_identifiers":["MetaCyc:3.2.1.142-RXN"],"synonyms":[{"name":"R-enzyme","type":"related"},{"name":"amylopectin-1,6-glucosidase activity","type":"related"},{"name":"dextrin alpha-1,6-glucanohydrolase activity","type":"related"}],"termid":"GO:0010303"}


id: MONDO:0002349
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete agammaglobulinemia (obsolete MONDO:0002349)","termid":"MONDO:0002349","xrefs":{"Monarch":{"xref_id":"0002349"}}}


id: MONDO:1012014
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"type-II collagen-immune complex arthritis, non-human animal","termid":"MONDO:1011937"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"type-II collagen-immune complex arthritis, sheep","secondary_identifiers":["OMIA:000068-9940"],"termid":"MONDO:1012014","xrefs":{"Monarch":{"xref_id":"1012014"}}}


id: MONDO:0006394
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A usually polypoid neoplasm that arises from the glandular epithelium of the rectal mucosa. It is characterized by a tubular architectural pattern. The neoplastic glandular cells have dysplastic features.","definition_xrefs":["NCIT:C96477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rectum adenoma","termid":"MONDO:0000530"},{"relation_name":"is_a","term_name":"tubular adenoma","termid":"MONDO:0024660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"rectal tubular adenoma","secondary_identifiers":["MEDGEN:474437","UMLS:C3272804","EFO:1000504"],"synonyms":[{"name":"rectal tubular adenoma","type":"exact"}],"termid":"MONDO:0006394","xrefs":{"Monarch":{"xref_id":"0006394"}}}


id: PBO:0080394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS26 retromer complex component B","termid":"PBO:0080394"}


id: PBO:0081363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF197 antisense RNA 1","termid":"PBO:0081363"}


id: MONDO:0004249
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An ependymoma that arises from the supratentorial region of the brain and occurs during childhood.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"supratentorial cancer","termid":"MONDO:0002071"},{"relation_name":"is_a","term_name":"childhood ependymoma","termid":"MONDO:0003478"},{"relation_name":"is_a","term_name":"childhood malignant neoplasm","termid":"MONDO:0006517"},{"relation_name":"is_a","term_name":"supratentorial ependymal tumor","termid":"MONDO:0020687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pediatric supratentorial ependymoma","secondary_identifiers":["MEDGEN:78854","UMLS:C0278650","DOID:7502","EFO:0008495","NCIT:C9043"],"synonyms":[{"name":"childhood supratentorial ependymoma","type":"exact"},{"name":"paediatric cerebral ependymoma","type":"exact"},{"name":"paediatric supratentorial ependymoblastoma","type":"exact"},{"name":"pediatric cerebral ependymoma","type":"exact"},{"name":"pediatric supratentorial ependymoblastoma","type":"exact"},{"name":"supratentorial ependymoma","type":"broad"}],"termid":"MONDO:0004249","xrefs":{"Monarch":{"xref_id":"0004249"}}}


id: PBO:0090042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-3-phosphatase, myotubularin family","termid":"PBO:0090042"}


id: GO:0044209
data:
  {"annotated_genes":["SJAG_01070","SJAG_01859"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57366,75680],"is_not":false,"summary":null,"term":"GO:0044209"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of adenosine monophosphate (AMP) from derivatives of it (either adenine, ADP or adenosine 3',5'-bisphosphate) without de novo synthesis.","definition_xrefs":["PMID:9864350","PMID:8917457","GOC:jl","GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"AMP biosynthetic process","termid":"GO:0006167"},{"relation_name":"is_a","term_name":"purine ribonucleotide salvage","termid":"GO:0106380"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01070":null,"SJAG_01859":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"AMP salvage","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null},"synonyms":[{"name":"AMP biosynthetic process via salvage pathway","type":"exact"},{"name":"adenosine monophosphate salvage","type":"exact"}],"termid":"GO:0044209","terms_by_termid":{"GO:0044209":null}}


id: GO:0071320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cAMP","termid":"GO:0051591"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to cAMP","synonyms":[{"name":"cellular response to 3',5' cAMP","type":"exact"},{"name":"cellular response to 3',5'-cAMP","type":"exact"},{"name":"cellular response to adenosine 3',5'-cyclophosphate","type":"exact"},{"name":"cellular response to cyclic AMP","type":"exact"}],"termid":"GO:0071320"}


id: PBO:0000545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bZIP (basic leucine zipper) transcription factor family","termid":"PBO:0000545"}


id: PBO:0087516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of heterotrimeric Replication Protein A (RPA); RPA is a highly conserved single-stranded DNA binding protein involved in DNA replication, repair, and recombination; RPA protects against inappropriate telomere recombination, and upon telomere uncapping, prevents cell proliferation by a checkpoint-independent pathway; in concert with Sgs1p-Top2p-Rmi1p, stimulates DNA catenation/decatenation activity of Top3p; protein abundance increases in response to DNA replication s","termid":"PBO:0087516"}


id: PR:P78946
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl26 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P78946"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L26 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29B5.03c","synonyms":[{"name":"Spom972h-rpl26","type":"exact"}],"termid":"PR:P78946"}


id: PBO:0025513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein, INCENP ortholog Pic1","termid":"PBO:0025513"}


id: FYPO:0005009
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of serine residues three positions C-terminal to arginine residues (i.e. in Arg-X-X-Ser, or RxxS, sequences) occurs to a lower extent than normal.","definition_xrefs":["PMID:22976295","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased protein serine phosphorylation at RxxS site during vegetative growth (obsolete FYPO:0005009)","synonyms":[{"name":"decreased protein serine phosphorylation at Arg-X-X-Ser site during vegetative growth","type":"exact"},{"name":"decreased protein serine phosphorylation at PAS site during vegetative growth","type":"exact"},{"name":"decreased protein serine phosphorylation at RxxS site during mitotic cell cycle","type":"related"},{"name":"decreased protein serine phosphorylation at arginine-X-X-serine site during vegetative growth","type":"exact"},{"name":"decreased protein serine phosphorylation at phospho-Akt site during vegetative growth","type":"exact"},{"name":"reduced protein serine phosphorylation at RxxS site during vegetative growth","type":"exact"}],"termid":"FYPO:0005009"}


id: MONDO:0015612
data:
  {"annotated_genes":["SJAG_03375"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88855],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010359"}]},"cv_name":"mondo","definition":"Dent disease is a rare genetic renal tubular disease characterized by manifestations of proximal tubule dysfunction.","definition_xrefs":["Orphanet:1652"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"rickets","termid":"MONDO:0005520"},{"relation_name":"is_a","term_name":"renal tubular transport disease","termid":"MONDO:0006510"},{"relation_name":"is_a","term_name":"inherited renal tubular disease","termid":"MONDO:0015962"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03375":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"Dent disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:300009","GARD:13105","SCTID:444645005","UMLS:C0878681","MEDGEN:168056","MESH:D057973","NORD:1040","DOID:0050699","MedDRA:10069199","icd11.foundation:1762998355","NCIT:C123260"],"synonyms":[{"name":"Dent disease 1","type":"narrow"},{"name":"Dent disease 2","type":"narrow"},{"name":"Dent syndrome","type":"exact"},{"name":"Dent's disease","type":"exact"},{"name":"Dents disease","type":"related"},{"name":"X-linked recessive hypercalciuric hypophosphatemic rickets","type":"exact"},{"name":"X-linked recessive hypophosphatemic rickets","type":"exact"},{"name":"X-linked recessive nephrolithiasis","type":"exact"},{"name":"low-molecular-weight proteinuria with hypercalciuria and nephrocalcinosis","type":"exact"},{"name":"renal Fanconi syndrome with nephrocalcinosis and renal stones","type":"exact"}],"termid":"MONDO:0015612","terms_by_termid":{"MONDO:0010359":null},"xrefs":{"Monarch":{"xref_id":"0015612"}}}


id: MONDO:0008739
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"agenesis of cerebral white matter","secondary_identifiers":["OMIM:202600","UMLS:C1859969","MEDGEN:347986"],"synonyms":[{"name":"agenesis of cerebral white matter","type":"exact"}],"termid":"MONDO:0008739","xrefs":{"Monarch":{"xref_id":"0008739"}}}


id: PBO:0085746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in yeast cell wall biogenesis; localizes to the cell periphery; production of Nag1p is dependent upon the presence of Slt2p and Rlm1p; gene is nested within and antisense to IMO32","termid":"PBO:0085746"}


id: PBO:0049702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"highly accelerated region 1B","termid":"PBO:0049702"}


id: PBO:0038785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acylphosphatase 1","termid":"PBO:0038785"}


id: FYPO:0003349
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle midzone during anaphase B is normal (i.e. indistinguishable from wild type). The mitotic spindle midzone is the area in the center of the mitotic spindle where the spindle microtubules from opposite poles overlap. Anaphase B is the stage of mitosis in which the polar microtubules elongate and the two poles of the spindle move farther apart.","definition_xrefs":["GO:0000092","GO:1990023","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to mitotic spindle midzone","termid":"FYPO:0004692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to mitotic spindle midzone during anaphase B","synonyms":[{"name":"normal protein localisation to mitotic spindle midzone during anaphase B","type":"exact"},{"name":"normal protein localization to mitotic spindle midzone during anaphase B during vegetative growth","type":"exact"},{"name":"normal protein localization to spindle midzone during anaphase B during mitotic cell cycle","type":"exact"}],"termid":"FYPO:0003349"}


id: GO:0051229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled breakdown of the spindle during a meiotic cell cycle.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic spindle organization","termid":"GO:0000212"},{"relation_name":"is_a","term_name":"spindle disassembly","termid":"GO:0051230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0000226","GO:0008150","GO:0007010","GO:0007049"],"is_obsolete":false,"name":"meiotic spindle disassembly","synonyms":[{"name":"meiotic spindle breakdown","type":"exact"},{"name":"meiotic spindle catabolism","type":"exact"},{"name":"meiotic spindle degradation","type":"exact"},{"name":"spindle breakdown during meiosis","type":"exact"},{"name":"spindle degradation during meiosis","type":"exact"},{"name":"spindle disassembly during meiosis","type":"exact"}],"termid":"GO:0051229"}


id: PBO:0073222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"semaphorin 6C","termid":"PBO:0073222"}


id: GO:1902360
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any conversion of ds siRNA to ss siRNA that is involved in gene silencing by small RNA.","definition_xrefs":["GOC:TermGenie","PMID:19239886","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete conversion of ds siRNA to ss siRNA involved in gene silencing by small RNA (obsolete GO:1902360)","synonyms":[{"name":"conversion of double-stranded small interfering RNA to single-stranded small interfering RNA involved in RNA interference-like chromatin silencing","type":"related"},{"name":"conversion of double-stranded small interfering RNA to single-stranded small interfering RNA involved in RNA-mediated chromatin silencing","type":"related"},{"name":"conversion of double-stranded small interfering RNA to single-stranded small interfering RNA involved in RNA-mediated transcriptional silencing","type":"related"},{"name":"conversion of double-stranded small interfering RNA to single-stranded small interfering RNA involved in RNAi-directed chromatin silencing","type":"related"},{"name":"conversion of double-stranded small interfering RNA to single-stranded small interfering RNA involved in RNAi-like chromatin silencing","type":"related"},{"name":"conversion of double-stranded small interfering RNA to single-stranded small interfering RNA involved in chromatin silencing by small RNA","type":"related"},{"name":"conversion of double-stranded small interfering RNA to single-stranded small interfering RNA involved in small RNA-mediated heterochromatic silencing","type":"related"},{"name":"conversion of ds siRNA to ss siRNA involved in RNA interference-like chromatin silencing","type":"exact"},{"name":"conversion of ds siRNA to ss siRNA involved in RNA-mediated chromatin silencing","type":"exact"},{"name":"conversion of ds siRNA to ss siRNA involved in RNA-mediated transcriptional silencing","type":"exact"},{"name":"conversion of ds siRNA to ss siRNA involved in RNAi-directed chromatin silencing","type":"exact"},{"name":"conversion of ds siRNA to ss siRNA involved in RNAi-like chromatin silencing","type":"exact"},{"name":"conversion of ds siRNA to ss siRNA involved in chromatin silencing by small RNA","type":"exact"},{"name":"conversion of ds siRNA to ss siRNA involved in small RNA-mediated heterochromatic silencing","type":"exact"}],"termid":"GO:1902360"}


id: GO:0061432
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a methionine stimulus.","definition_xrefs":["PMID:7891681","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter in response to methionine (obsolete GO:0061432)","termid":"GO:0061432"}


id: PBO:0043863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crumbs cell polarity complex component 1","termid":"PBO:0043863"}


id: RO:0002385
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x has potential to developmentrally contribute to y iff x developmentally contributes to y or x is capable of developmentally contributing to y","direct_ancestors":[{"relation_name":"is_a","term_name":"has_developmental_potential_involving","termid":"RO:0002384"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_potential_to_developmentally_contribute_to","termid":"RO:0002385"}


id: PBO:0056196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGEA6 divergent transcript","termid":"PBO:0056196"}


id: GO:0048798
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of the swim bladder by trapped gases. The swim bladder is used by some fishes to maintain buoyancy and may function in addition as a sound producing organ, a sound receptor, and a respiratory organ.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"swim bladder maturation","termid":"GO:0048796"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"swim bladder inflation","synonyms":[{"name":"gas bladder inflation","type":"exact"}],"termid":"GO:0048798"}


id: PBO:0116796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRK antisense RNA 1","termid":"PBO:0116796"}


id: PBO:0039885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGAP42 pseudogene 2","termid":"PBO:0039885"}


id: FYPO:0004490
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more transport RNAs measured in a cell is higher than normal (i.e. higher than observed in wild-type cells). Transport RNAs are transcribed from genes whose products are involved in one or more transport processes.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"increased level of transport gene mRNA during vegetative growth","synonyms":[{"name":"increased level of transport gene RNA during vegetative growth","type":"exact"},{"name":"increased level of transport gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of transport gene transcripts during vegetative growth","type":"exact"},{"name":"increased transport gene mRNA accumulation during vegetative growth","type":"related"}],"termid":"FYPO:0004490"}


id: PBO:0083643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Elongase; involved in fatty acid and sphingolipid biosynthesis; synthesizes very long chain 20-26-carbon fatty acids from C18-CoA primers; involved in regulation of sphingolipid biosynthesis; lethality of the elo2 elo3 double null mutation is functionally complemented by human ELOVL1 and weakly complemented by human ELOVL3 or ELOV7","termid":"PBO:0083643"}


id: GO:0004359
data:
  {"annotated_genes":["SJAG_03775","SJAG_00691","SJAG_00964","SJAG_02618","SJAG_00392"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[65383,79393,80119,95236,112939],"is_not":false,"summary":null,"term":"GO:0004359"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-glutamine + H2O = L-glutamate + NH4+.","definition_xrefs":["RHEA:15889"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00392":null,"SJAG_00691":null,"SJAG_00964":null,"SJAG_02618":null,"SJAG_03775":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016810"],"is_obsolete":false,"name":"glutaminase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:3.5.1.2","Reactome:R-HSA-70609"],"synonyms":[{"name":"L-glutaminase activity","type":"related"},{"name":"L-glutamine amidohydrolase activity","type":"related"},{"name":"glutaminase I","type":"related"},{"name":"glutamine aminohydrolase activity","type":"related"}],"termid":"GO:0004359","terms_by_termid":{"GO:0004359":null}}


id: MONDO:0017221
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The connatal form of Pelizaeus-Merzbacher disease (PMD) is the most severe form of PMD.","definition_xrefs":["Orphanet:280210"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Pelizeaus-Merzbacher spectrum disorder","termid":"MONDO:0010714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"Pelizaeus-Merzbacher disease, connatal form","secondary_identifiers":["MEDGEN:1842817","UMLS:C5679776","GARD:17291","icd11.foundation:1118374715"],"synonyms":[{"name":"Pelizaeus-Merzbacher disease type II","type":"exact"},{"name":"connatal PMD","type":"exact"},{"name":"severe PMD","type":"exact"}],"termid":"MONDO:0017221","xrefs":{"Monarch":{"xref_id":"0017221"}}}


id: GO:0097315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an N-acetyl-D-glucosamine stimulus.","definition_xrefs":["PMID:21700702","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to N-acetyl-D-glucosamine","termid":"GO:0097315"}


id: PBO:0089790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TACC protein Alp7","termid":"PBO:0089790"}


id: GO:1904157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a DN4 thymocyte. A DN4 thymocyte is a CD4-,CD8- thymocyte that is also CD44-,CD25-.","definition_xrefs":["GO_REF:0000086","GOC:dph","GOC:TermGenie","PMID:25398325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell differentiation in thymus","termid":"GO:0033077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"DN4 thymocyte differentiation","termid":"GO:1904157"}


id: PBO:0046791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EZR antisense RNA 1","termid":"PBO:0046791"}


id: GO:0022030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of glial cells through the telencephalon.","definition_xrefs":["GO_REF:0000021","GOC:jid","GOC:cls","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell migration","termid":"GO:0008347"},{"relation_name":"is_a","term_name":"telencephalon cell migration","termid":"GO:0022029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"telencephalon glial cell migration","termid":"GO:0022030"}


id: PBO:0034133
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-causes_condition","termid":"PBO:0034133"}


id: PBO:0059986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 6","termid":"PBO:0059986"}


id: PBO:0090853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1688 family fungal conserved protein, implicated in uracil or riboflavin metabolism","termid":"PBO:0090853"}


id: GO:0006727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ommochromes, any of a large group of natural polycyclic pigments commonly found in the Arthropoda, particularly in the ommatidia of the compound eye.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye pigment biosynthetic process","termid":"GO:0006726"},{"relation_name":"is_a","term_name":"ocellus pigment biosynthetic process","termid":"GO:0008055"},{"relation_name":"is_a","term_name":"ommochrome metabolic process","termid":"GO:0046152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"ommochrome biosynthetic process","synonyms":[{"name":"ommochrome anabolism","type":"exact"},{"name":"ommochrome biosynthesis","type":"exact"},{"name":"ommochrome formation","type":"exact"},{"name":"ommochrome synthesis","type":"exact"}],"termid":"GO:0006727"}


id: FYPO:0003838
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actomyosin contractile ring contraction does not occur. Contractile ring contraction is the part of cytokinesis in which the actomyosin contractile ring constricts.","definition_xrefs":["PomBase:mah","GO:1902404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring contraction","termid":"FYPO:0001364"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000032","FYPO:0005447","FYPO:0000002","FYPO:0004803","FYPO:0000631"],"is_obsolete":false,"name":"abolished actomyosin contractile ring contraction","synonyms":[{"name":"abolished actomyosin contractile ring constriction","type":"exact"},{"name":"abolished actomyosin contractile ring contraction during mitotic cell cycle","type":"related"},{"name":"abolished actomyosin contractile ring contraction during vegetative growth","type":"exact"},{"name":"abolished cytokinesis with stable actinomyosin ring","type":"related"},{"name":"abolished cytokinetic contractile ring contraction","type":"exact"},{"name":"abolished mitotic actomyosin contractile ring contraction","type":"exact"},{"name":"abolished mitotic contractile ring contraction","type":"exact"},{"name":"actomyosin contractile ring contraction abolished","type":"exact"}],"termid":"FYPO:0003838"}


id: PBO:0120253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAD2 antisense RNA 1","termid":"PBO:0120253"}


id: PBO:0018045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EMP70 family endosomal transport protein Emp70","termid":"PBO:0018045"}


id: MONDO:0018706
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndromic sensorineural deafness due to combined oxidative phosphorylation defect (obsolete MONDO:0018706)","termid":"MONDO:0018706","xrefs":{"Monarch":{"xref_id":"0018706"}}}


id: MONDO:0021054
data:
  {"annotated_genes":["SJAG_04287"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87953],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0002629"}]},"cv_name":"mondo","definition":"A sarcoma that arises from the bone. Representative examples are osteosarcoma and chondrosarcoma.","definition_xrefs":["NCIT:C9312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone cancer","termid":"MONDO:0002129"},{"relation_name":"is_a","term_name":"sarcoma","termid":"MONDO:0005089"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04287":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"bone sarcoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:170.9","DOID:0080639","GARD:20547","Orphanet:223727","MEDGEN:352831","MedDRA:10006007","SCTID:448710000","UMLS:C1704327"],"synonyms":[{"name":"bone sarcoma","type":"exact"},{"name":"osseous sarcoma","type":"exact"},{"name":"sarcoma of bone","type":"exact"},{"name":"sarcoma of the bone","type":"exact"},{"name":"skeletal sarcoma","type":"exact"}],"termid":"MONDO:0021054","terms_by_termid":{"MONDO:0002629":null},"xrefs":{"Monarch":{"xref_id":"0021054"}}}


id: PBO:0090964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-3 adaptor complex subunit Apm3","termid":"PBO:0090964"}


id: PBO:0027240
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_radicicol","termid":"PBO:0027240"}


id: MONDO:0014897
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete portal hypertension, noncirrhotic (obsolete MONDO:0014897)","termid":"MONDO:0014897","xrefs":{"Monarch":{"xref_id":"0014897"}}}


id: PBO:0056587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of DNA damage checkpoint 1","termid":"PBO:0056587"}


id: GO:0110165
data:
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