# terms

id: MONDO:0007120
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aniridia-absent patella is a syndrome described in three members of a family (a boy, his father, and his paternal grandmother) that is characterized by the association of aniridia with patella aplasia or hypoplasia. The grandmother also had bilateral cataracts and glaucoma. There have been no further descriptions in the literature since 1975.","definition_xrefs":["Orphanet:1069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aniridia-absent patella syndrome","secondary_identifiers":["OMIM:106220","MEDGEN:400149","UMLS:C1862868","GARD:685","MESH:C566281"],"synonyms":[{"name":"aniridia absent patella","type":"related"},{"name":"aniridia and absent patella","type":"related"},{"name":"familial syndrome of aniridia and absence of the patella","type":"related"}],"termid":"MONDO:0007120","xrefs":{"Monarch":{"xref_id":"0007120"}}}


id: PBO:0044466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily Z member 1","termid":"PBO:0044466"}


id: GO:0008961
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the prospective N-terminal cysteine residue in an unmodified prolipoprotein.","definition_xrefs":["PMID:8051048","RHEA:56712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosyltransferase activity","termid":"GO:0016757"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003674","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity","secondary_identifiers":["EC:2.5.1.145"],"termid":"GO:0008961"}


id: FYPO:0005397
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein transport in the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["GO:0006886","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein transport during vegetative growth","termid":"FYPO:0004848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal intracellular protein transport during vegetative growth","synonyms":[{"name":"normal intracellular protein transport during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005397"}


id: PBO:0064072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 106","termid":"PBO:0064072"}


id: PATO:0000817
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000817 anosmia (obsolete PATO:0000817)","termid":"PATO:0000817"}


id: MONDO:0971011
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"MHC class I deficiency","termid":"MONDO:0011476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"MHC class I deficiency 2","secondary_identifiers":["UMLS:C5935617","MEDGEN:1862135","OMIM:620813"],"termid":"MONDO:0971011","xrefs":{"Monarch":{"xref_id":"0971011"}}}


id: FYPO:0001559
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methionine import into the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal amino acid import","termid":"FYPO:0001596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0000257"],"is_obsolete":false,"name":"normal methionine import","synonyms":[{"name":"normal L-methionine import","type":"exact"},{"name":"normal L-methionine import across plasma membrane","type":"exact"},{"name":"normal methionine import during mitotic cell cycle","type":"related"},{"name":"normal methionine import during vegetative growth","type":"exact"},{"name":"normal methionine import into cell","type":"exact"},{"name":"normal methionine uptake","type":"exact"}],"termid":"FYPO:0001559"}


id: _global:causally_downstream_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"inverse of upstream of","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_downstream_of_or_within","termid":"_global:causally_downstream_of_or_within"},{"relation_name":"is_a","term_name":"preceded_by","termid":"_global:preceded_by"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causally_downstream_of","secondary_identifiers":["RO:0002404"],"termid":"_global:causally_downstream_of"}


id: MONDO:0007347
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Coxsackievirus B3 susceptibility (obsolete MONDO:0007347)","secondary_identifiers":["OMIM:120050"],"synonyms":[{"name":"CXB3S","type":"exact"},{"name":"Cb3S","type":"related"},{"name":"Coxsackievirus B3 susceptibility","type":"related"}],"termid":"MONDO:0007347","xrefs":{"Monarch":{"xref_id":"0007347"}}}


id: MONDO:0020403
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mitral valve agenesis is a rare congenital heart malformation defined as an agenesis or severe hypoplasia of both mitral valve leaflets (complete agenesis) or one of the leaflets (partial agenesis). Complete mitral valve agenesis presents in the neonatal period with symptoms of severe mitral regurgitation and is rapidly fatal unless surgically treated. It is frequently associated with other heart malformations. Partial mitral valve agenesis may present at various ages, usually with symptoms of mitral regurgitation.","definition_xrefs":["Orphanet:99062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital mitral valve insufficiency and/or stenosis","termid":"MONDO:0019817"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital mitral valve agenesis","secondary_identifiers":["GARD:19629","UMLS:C0685721","MEDGEN:672659"],"termid":"MONDO:0020403","xrefs":{"Monarch":{"xref_id":"0020403"}}}


id: PBO:0044295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CXXC4 antisense RNA 1","termid":"PBO:0044295"}


id: PBO:0004370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoskeletal protein Syp1 (predicted)","termid":"PBO:0004370"}


id: PBO:0069165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 417, pseudogene","termid":"PBO:0069165"}


id: MONDO:0014085
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital hydrocephalus in which the cause of the disease is a mutation in the MPDZ gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital hydrocephalus","termid":"MONDO:0016349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"hydrocephalus, nonsyndromic, autosomal recessive 2","secondary_identifiers":["OMIM:615219","UMLS:C3554691","MEDGEN:767605"],"synonyms":[{"name":"HYC2","type":"related"},{"name":"MPDZ congenital hydrocephalus","type":"exact"},{"name":"congenital hydrocephalus caused by mutation in MPDZ","type":"exact"},{"name":"hydrocephalus, congenital, 2, with or without brain or eye anomalies","type":"exact"},{"name":"hydrocephalus, nonsyndromic, autosomal recessive 2","type":"exact"},{"name":"hydrocephalus, nonsyndromic, autosomal recessive type 2","type":"exact"}],"termid":"MONDO:0014085","xrefs":{"Monarch":{"xref_id":"0014085"}}}


id: PBO:0086237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that interacts with Vps4p and has a role in vacuolar sorting; stimulates the ATPase activity of Vps4; localizes to endosomes in a Vps4-dependent manner; overexpression causes canavanine sensitivity and confers a partial class D vacuole morphology","termid":"PBO:0086237"}


id: MONDO:0015280
data:
  {"annotated_genes":["SJAG_02342","SJAG_00993","SJAG_03453","SJAG_01181"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86792],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014112"},{"annotations":[86794,86793,86795],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014113"},{"annotations":[86800,86798,86799],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014114"}]},"cv_name":"mondo","definition":"Cardiofaciocutaneous (CFC) syndrome is a RASopathy characterized by craniofacial dysmorphology, congenital heart disease, dermatological abnormalities (most commonly hyperkeratotic skin and sparse, curly hair), growth retardation and intellectual disability.","definition_xrefs":["Orphanet:1340"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"},{"relation_name":"is_a","term_name":"Noonan syndrome and Noonan-related syndrome","termid":"MONDO:0020297"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00993":null,"SJAG_01181":null,"SJAG_02342":null,"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0005093"],"is_obsolete":false,"name":"cardiofaciocutaneous syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1275081","MESH:C535579","NANDO:2200967","NORD:891","NCIT:C84617","SCTID:403770008","GARD:9146","MEDGEN:266149","NANDO:1200462","OMIMPS:115150","DOID:0060233"],"synonyms":[{"name":"CFC","type":"exact"},{"name":"CFC syndrome","type":"exact"},{"name":"cardio-facial-cutaneous syndrome","type":"exact"},{"name":"cardio-facio-cutaneous syndrome","type":"related"},{"name":"cardiofaciocutaneous (CFC) syndrome","type":"exact"},{"name":"cardiofaciocutaneous syndrome","type":"exact"},{"name":"congenital heart defects characteristic facial appearance ectodermal abnormalities and growth failure","type":"related"}],"termid":"MONDO:0015280","terms_by_termid":{"MONDO:0014112":null,"MONDO:0014113":null,"MONDO:0014114":null},"xrefs":{"Monarch":{"xref_id":"0015280"}}}


id: MONDO:0002572
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the lungs due to the inhalation of solid or liquid material.","definition_xrefs":["NCIT:C34932"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"pneumonia","termid":"MONDO:0005249"},{"relation_name":"is_a","term_name":"pneumonitis","termid":"MONDO:0043905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspiration pneumonitis","secondary_identifiers":["DOID:3240","EFO:1001399","MEDGEN:740734","MESH:D011015","UMLS:C1761609","SCTID:155597006","SCTID:422588002"],"synonyms":[{"name":"aspiration pneumonia","type":"related"},{"name":"chemical pneumonitis","type":"narrow"}],"termid":"MONDO:0002572","xrefs":{"Monarch":{"xref_id":"0002572"}}}


id: FYPO:0004697
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to 1,2-dioctanoyl-sn-glycerol (DiC8 DAG). Cells stop growing (and may die) at a concentration of 1,2-dioctanoyl-sn-glycerol that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002683","FYPO:0001985","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to 1,2-dioctanoyl-sn-glycerol","synonyms":[{"name":"hypersensitive to 1,2-dioctanoyl-sn-glycerol","type":"exact"},{"name":"sensitive to 1,2-dioctanoyl-sn-glycerol during mitotic cell cycle","type":"related"},{"name":"sensitive to 1,2-dioctanoyl-sn-glycerol during vegetative growth","type":"exact"},{"name":"sensitive to DiC8 DAG","type":"exact"}],"termid":"FYPO:0004697"}


id: GO:0031479
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A myosin complex containing a class IX myosin heavy chain and associated light chains. Myosin IX is monomeric with a motor domain containing an N-terminal extension and an insert in the actin binding interface, followed by four to six IQ motifs and a tail region that contains a zinc binding motif and a domain with homology to GTPase activating proteins (GAPs) of the Rho family of G-proteins.","definition_xrefs":["PMID:29679756"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unconventional myosin complex","termid":"GO:0016461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0015629","GO:0005575"],"is_obsolete":false,"name":"myosin IX complex","termid":"GO:0031479"}


id: MONDO:0850129
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A gastrointestinal system cancer that is located in the proximal esophagus and the distal stomach.","definition_xrefs":["DOID:0080374"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system cancer","termid":"MONDO:0002516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"gastroesophageal cancer","secondary_identifiers":["MEDGEN:577508","UMLS:C0346619"],"termid":"MONDO:0850129","xrefs":{"Monarch":{"xref_id":"0850129"}}}


id: GO:1901540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ent-pimara-8(14),15-diene.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene catabolic process","termid":"GO:0046247"},{"relation_name":"is_a","term_name":"ent-pimara-8(14),15-diene metabolic process","termid":"GO:1901539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"ent-pimara-8(14),15-diene catabolic process","synonyms":[{"name":"ent-pimara-8(14),15-diene breakdown","type":"exact"},{"name":"ent-pimara-8(14),15-diene catabolism","type":"exact"},{"name":"ent-pimara-8(14),15-diene degradation","type":"exact"}],"termid":"GO:1901540"}


id: MONDO:1010668
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Factor XIII deficiency that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"factor XIII deficiency, non-human animal","termid":"MONDO:1010085"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"factor XIII deficiency, cattle","secondary_identifiers":["OMIA:001818-9913"],"termid":"MONDO:1010668","xrefs":{"Monarch":{"xref_id":"1010668"}}}


id: PBO:0090298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk33","termid":"PBO:0090298"}


id: GO:0004075
data:
  {"annotated_genes":["SJAG_03313"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[67290],"is_not":false,"summary":null,"term":"GO:0004075"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + biotin-carboxyl-carrier protein + CO2 = ADP + phosphate + carboxybiotin-carboxyl-carrier protein.","definition_xrefs":["EC:6.3.4.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"biotin carboxylase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["MetaCyc:BIOTIN-CARBOXYL-RXN","RHEA:13501"],"synonyms":[{"name":"biotin carboxylase (component of acetyl CoA carboxylase) activity","type":"related"},{"name":"biotin-carboxyl-carrier-protein:carbon-dioxide ligase (ADP-forming) activity","type":"related"}],"termid":"GO:0004075","terms_by_termid":{"GO:0004075":null}}


id: MONDO:0009058
data:
  {"annotated_genes":["SJAG_03671"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86806],"is_not":false,"summary":null,"term":"MONDO:0009058"}]},"cv_name":"mondo","definition":"Cystathioninuria is an autosomal recessive disorder caused by cystathionine gamma-lyase deficiency. It is usually pyridoxine-dependent, but in very rare cases it may be non-dependent. It is generally considered to be a benign condition without pathogenic relevance. However, association of cystathioninuria with intellectual impairment has been reported in several cases.","definition_xrefs":["Orphanet:212"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of amino acid metabolism","termid":"MONDO:0004736"},{"relation_name":"is_a","term_name":"inborn disorder of methionine cycle and sulfur amino acid metabolism","termid":"MONDO:0019222"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"cystathioninuria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:2428","NCIT:C129070","DOID:0090142","SCTID:13003007","UMLS:C0220993","HP:0003153","MEDGEN:66353","OMIM:219500","icd11.foundation:1415819835"],"synonyms":[{"name":"Cystathione gamma-lyase deficiency syndrome","type":"exact"},{"name":"cystathionase deficiency","type":"exact"},{"name":"cystathione gamma-lyase deficiency syndrome","type":"exact"},{"name":"cystathioninuria","type":"exact"},{"name":"cystathioninuria (disease)","type":"exact"},{"name":"gamma-cystathionase deficiency","type":"exact"}],"termid":"MONDO:0009058","terms_by_termid":{"MONDO:0009058":null},"xrefs":{"Monarch":{"xref_id":"0009058"}}}


id: PBO:0038800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 6 (pseudogene)","termid":"PBO:0038800"}


id: PBO:0043421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CNEP1R1 pseudogene 1","termid":"PBO:0043421"}


id: MONDO:0003004
data:
  {"annotated_genes":["SJAG_01356","SJAG_00737","SJAG_03258","SJAG_02885"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89103,89102],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012419"},{"annotations":[87890,87889],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010819"}]},"cv_name":"mondo","definition":"Loss of vision in the central portion of the retina (macula), secondary to retinal degeneration.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal degeneration","termid":"MONDO:0004580"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00737":null,"SJAG_01356":null,"SJAG_02885":null,"SJAG_03258":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"macular degeneration","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:4448","EFO:0009606","NCIT:C123330","UMLS:C0024437","MEDGEN:7434","MESH:D008268","SCTID:422338006"],"synonyms":[{"name":"macula lutea retinal degeneration","type":"exact"},{"name":"macula retinal degeneration","type":"exact"},{"name":"macular degeneration of retina","type":"exact"},{"name":"retinal degeneration of macula lutea","type":"exact"}],"termid":"MONDO:0003004","terms_by_termid":{"MONDO:0010819":null,"MONDO:0012419":null},"xrefs":{"Monarch":{"xref_id":"0003004"}}}


id: PBO:0041516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 15 open reading frame 48","termid":"PBO:0041516"}


id: PBO:0069661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 938, pseudogene","termid":"PBO:0069661"}


id: GO:0004160
data:
  {"annotated_genes":["SJAG_04098"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72942],"is_not":false,"summary":null,"term":"GO:0004160"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (2R)-2,3-dihydroxy-3-methylbutanoate = 3-methyl-2-oxobutanoate + H2O.","definition_xrefs":["RHEA:24809"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04098":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"dihydroxy-acid dehydratase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:DIHYDROXYISOVALDEHYDRAT-RXN","EC:4.2.1.9"],"synonyms":[{"name":"2,3-dihydroxy-acid hydro-lyase (3-methyl-2-oxobutanoate-forming)","type":"related"},{"name":"2,3-dihydroxy-acid hydro-lyase activity","type":"related"},{"name":"2,3-dihydroxyisovalerate dehydratase activity","type":"related"},{"name":"DHAD","type":"related"},{"name":"acetohydroxyacid dehydratase activity","type":"related"},{"name":"alpha,beta-dihydroxyacid dehydratase activity","type":"related"},{"name":"alpha,beta-dihydroxyisovalerate dehydratase activity","type":"related"},{"name":"dihydroxy acid dehydrase activity","type":"related"}],"termid":"GO:0004160","terms_by_termid":{"GO:0004160":null}}


id: MONDO:0030397
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"portal hypertension, noncirrhotic","termid":"MONDO:0024193"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"portal hypertension, noncirrhotic, 2","secondary_identifiers":["UMLS:C5561948","OMIM:619463","MEDGEN:1794158"],"synonyms":[{"name":"NCPH2","type":"exact"}],"termid":"MONDO:0030397","xrefs":{"Monarch":{"xref_id":"0030397"}}}


id: GO:0072320
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a chloride ion by a volume-sensitive channel. A volume-sensitive channel is a channel that responds to changes in the volume of a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"volume-sensitive anion channel activity","termid":"GO:0005225"},{"relation_name":"is_a","term_name":"chloride channel activity","termid":"GO:0005254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"volume-sensitive chloride channel activity","synonyms":[{"name":"swell-activated chloride channel","type":"related"}],"termid":"GO:0072320"}


id: MONDO:0012391
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Progressive epilepsy-intellectual deficit, Finnish type (also known as Northern epilepsy) is a subtype of neuronal ceroid lipofuscinosis (NCL) characterized by seizures, progressive decline of intellectual capacities and variable loss of vision.","definition_xrefs":["Orphanet:1947"],"direct_ancestors":[{"relation_name":"is_a","term_name":"juvenile myoclonic epilepsy","termid":"MONDO:0009696"},{"relation_name":"is_a","term_name":"neuronal ceroid lipofuscinosis 8","termid":"MONDO:0010830"},{"relation_name":"is_a","term_name":"monogenic epilepsy","termid":"MONDO:0015653"},{"relation_name":"is_a","term_name":"syndromic dyslipidemia","termid":"MONDO:0015905"},{"relation_name":"is_a","term_name":"progressive myoclonus epilepsy","termid":"MONDO:0020074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002525","MONDO:0005066","MONDO:0002561","MONDO:0005027","MONDO:0002039"],"is_obsolete":false,"name":"neuronal ceroid lipofuscinosis 8 northern epilepsy variant","secondary_identifiers":["DOID:0110724","ICD10CM:G40.3","MEDGEN:355328","OMIM:610003","UMLS:C1864923","GARD:4010","Orphanet:530298"],"synonyms":[{"name":"CLN8","type":"related"},{"name":"CLN8 disease, EPMR (subtype)","type":"related"},{"name":"CLN8 disease, Northern epilepsy variant","type":"exact"},{"name":"CLN8 disease, late infantile (subtype)","type":"related"},{"name":"EPMR","type":"exact"},{"name":"NCL, Northern epilepsy variant","type":"exact"},{"name":"Northern epilepsy","type":"exact"},{"name":"ceroid lipofuscinosis neuronal 8","type":"related"},{"name":"ceroid lipofuscinosis, neuronal, 8, NORTHERN epilepsy variant","type":"related"},{"name":"early onset familial encephalopathy with neuroserpin inclusion bodies","type":"exact"},{"name":"epilepsy mental deterioration Finnish type","type":"related"},{"name":"epilepsy, progressive, with intellectual disability","type":"related"},{"name":"epilepsy, progressive, with mental retardation","type":"related"},{"name":"neuronal ceroid lipofuscinosis 8","type":"related"},{"name":"neuronal ceroid lipofuscinosis, Northern epilepsy variant","type":"exact"},{"name":"northern epilepsy variant, neuronal ceroid lipofuscinosis, Northern epilepsy variant","type":"exact"},{"name":"progressive epilepsy - intellectual disability, Finnish type","type":"related"},{"name":"progressive epilepsy with intellectual disability, northern epilepsy","type":"exact"},{"name":"progressive epilepsy with mental retardation, northern epilepsy","type":"exact"},{"name":"progressive epilepsy-intellectual disability syndrome, Finnish type","type":"exact"},{"name":"progressive myoclonic epilepsy with neuroserpin inclusion bodies","type":"exact"}],"termid":"MONDO:0012391","xrefs":{"Monarch":{"xref_id":"0012391"}}}


id: MONDO:0005918
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Abnormal placentation in which the placenta implants in the lower segment of the uterus (the zone of dilation) and may cover part or all of the opening of the cervix. It is often associated with serious antepartum bleeding and premature labor.","definition_xrefs":["MESH:D010923"],"direct_ancestors":[{"relation_name":"is_a","term_name":"placenta disorder","termid":"MONDO:0005917"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"placenta praevia","secondary_identifiers":["EFO:0007442","ICD10CM:O44","SCTID:36813001","MEDGEN:10782","UMLS:C0032046","DOID:11060","NCIT:C26858"],"synonyms":[{"name":"placenta praevia","type":"exact"},{"name":"placenta previa","type":"exact"}],"termid":"MONDO:0005918","xrefs":{"Monarch":{"xref_id":"0005918"}}}


id: MOD:00596
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by formation of an adduct with 4-(2-aminoethyl)benzenesulfonyl fluoride, AEBS.","definition_xrefs":["Unimod:276","DeltaMass:235","PubMed:8597590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfonyl halide reagent derivatized residue","termid":"MOD:01652"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-(2-aminoethyl)benzenesulfonyl fluoride derivatized residue","synonyms":[{"name":"AEBS","type":"related"},{"name":"AEBSF","type":"exact"},{"name":"Aminoethylbenzenesulfonylation","type":"related"}],"termid":"MOD:00596"}


id: PBO:0030934
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_ubiquitination","termid":"PBO:0030934"}


id: MONDO:0100245
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acquired paroxysmal nocturnal hemoglobinuria (obsolete MONDO:0100245)","termid":"MONDO:0100245","xrefs":{"Monarch":{"xref_id":"0100245"}}}


id: PBO:0087835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Thiol-specific peroxiredoxin; reduces hydroperoxides to protect against oxidative damage; function in vivo requires covalent conjugation to Urm1p","termid":"PBO:0087835"}


id: MOD:00005
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to O3-glycosylthreonine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-glycosylated residue","termid":"MOD:00396"},{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"O-glycosyl-L-threonine","synonyms":[{"name":"OGlycoThr","type":"exact"}],"termid":"MOD:00005"}


id: GO:0043268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of potassium ions (K+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of potassium ion transport","termid":"GO:0043266"},{"relation_name":"is_a","term_name":"positive regulation of monoatomic ion transport","termid":"GO:0043270"},{"relation_name":"positively_regulates","term_name":"potassium ion transport","termid":"GO:0006813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of potassium ion transport","synonyms":[{"name":"activation of potassium ion transport","type":"narrow"},{"name":"positive regulation of K+ conductance","type":"narrow"},{"name":"positive regulation of K+ transport","type":"exact"},{"name":"positive regulation of potassium conductance","type":"narrow"},{"name":"positive regulation of potassium ion conductance","type":"narrow"},{"name":"positive regulation of potassium transport","type":"exact"},{"name":"stimulation of potassium ion transport","type":"narrow"},{"name":"up regulation of potassium ion transport","type":"exact"},{"name":"up-regulation of potassium ion transport","type":"exact"},{"name":"upregulation of potassium ion transport","type":"exact"}],"termid":"GO:0043268"}


id: PATO:0000843
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000843 relative auditory threshold value (obsolete PATO:0000843)","termid":"PATO:0000843"}


id: PBO:0063544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylethanolamine binding protein 1 pseudogene 3","termid":"PBO:0063544"}


id: PBO:0063243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin alpha 8","termid":"PBO:0063243"}


id: PBO:0066340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of chromosome condensation 2 pseudogene 2","termid":"PBO:0066340"}


id: MONDO:1010631
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chediak-Higashi syndrome that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Chediak-Higashi syndrome, non-human animal","termid":"MONDO:1010070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chediak-Higashi syndrome, cattle","secondary_identifiers":["OMIA:000185-9913"],"termid":"MONDO:1010631","xrefs":{"Monarch":{"xref_id":"1010631"}}}


id: PBO:0084954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Multi-stress response protein; expression is activated by a variety of xenobiotic agents and environmental or physiological stresses; DDR2 has a paralog, HOR7, that arose from the whole genome duplication","termid":"PBO:0084954"}


id: MONDO:0100151
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive condition caused by mutation(s) in the CTNS gene, encoding cystinosin. It is a sub-type of cystinosis, in which accumulation of cystine in the kidney results in renal dysfunction.","definition_xrefs":["NCIT:C129932"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"cystinosis","termid":"MONDO:0016239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0005066","MONDO:0006025"],"is_obsolete":false,"name":"nephropathic cystinosis","secondary_identifiers":["MEDGEN:419735","MESH:C535335","icd11.foundation:810546659","NANDO:2201234","UMLS:C2931187","NANDO:1200162","GARD:10074","OMIM:219800"],"synonyms":[{"name":"Abderhalden Kaufmann Lignac syndrome","type":"exact"},{"name":"Abderhalden Lignac Kaufmann disease","type":"exact"},{"name":"Abderhalden-Kaufmann-Lignac syndrome","type":"exact"},{"name":"Abderhalden-Lignac-Kaufmann disease","type":"exact"},{"name":"CTNS","type":"exact"},{"name":"cystinosis, atypical nephropathic","type":"exact"},{"name":"cystinosis, nephropathic","type":"exact"}],"termid":"MONDO:0100151","xrefs":{"Monarch":{"xref_id":"0100151"}}}


id: GO:0016905
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + myosin-heavy-chain = ADP + myosin-heavy-chain phosphate.","definition_xrefs":["EC:2.7.11.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium/calmodulin-dependent protein kinase activity","termid":"GO:0004683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0003674","GO:0004672","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"myosin heavy chain kinase activity","secondary_identifiers":["RHEA:11424"],"synonyms":[{"name":"ATP:myosin heavy-chain O-phosphotransferase activity","type":"related"},{"name":"ATP:myosin-heavy-chain O-phosphotransferase activity","type":"related"},{"name":"MHCK","type":"related"},{"name":"MIHC kinase activity","type":"related"},{"name":"STK6","type":"related"},{"name":"calmodulin-dependent myosin heavy chain kinase activity","type":"related"},{"name":"myosin I heavy chain kinase activity","type":"narrow"},{"name":"myosin I heavy-chain kinase activity","type":"narrow"},{"name":"myosin II heavy chain kinase activity","type":"narrow"},{"name":"myosin II heavy-chain kinase activity","type":"narrow"},{"name":"myosin heavy chain kinase A activity","type":"related"},{"name":"myosin heavy-chain kinase activity","type":"related"},{"name":"myosin-heavy-chain kinase activity","type":"related"}],"termid":"GO:0016905"}


id: PBO:0080520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WASP family homolog 2, pseudogene","termid":"PBO:0080520"}


id: PR:P87125
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ure4 gene.","definition_xrefs":["UniProtKB:P87125","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized urease accessory protein ureD-like (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A12.09c","synonyms":[{"name":"Spom972h-ure4","type":"exact"}],"termid":"PR:P87125"}


id: PBO:0028979
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_population_growth_on_methionine_sulfur_source","termid":"PBO:0028979"}


id: PBO:0074086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 26 member 3","termid":"PBO:0074086"}


id: GO:0036503
data:
  {"annotated_genes":["SJAG_00931","SJAG_01709","SJAG_02694","SJAG_02774","SJAG_01768","SJAG_01051","SJAG_00766","SJAG_00681","SJAG_01656","SJAG_01134","SJAG_03153","SJAG_01528","SJAG_00530","SJAG_03032","SJAG_02685","SJAG_00403","SJAG_03345","SJAG_04384","SJAG_03841","SJAG_04429","SJAG_00627","SJAG_01626","SJAG_03657","SJAG_00790","SJAG_04583","SJAG_00131","SJAG_02244","SJAG_07000","SJAG_01858","SJAG_02539","SJAG_04904","SJAG_05274","SJAG_00948","SJAG_01854","SJAG_00941","SJAG_05022","SJAG_04345","SJAG_03227","SJAG_04612","SJAG_01585","SJAG_00126"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72496,72558,72583,72753,73046,74224,75222,76095,76533,78109,80251,80368,80404,80445,80562,81310,89608,91363,93216,95379,96533,96803,99653,100036,102589,104750,106562,106648,109509,109949,110014,113835,117719,118457,119022],"is_not":false,"summary":null,"term":"GO:0036503"},{"annotations":[79281,79802],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1904293"},{"annotations":[77353,80851],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030970"},{"annotations":[95356,97523],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097466"}]},"cv_name":"biological_process","definition":"The protein catabolic pathway which targets endoplasmic reticulum (ER)-resident proteins for degradation by the cytoplasmic proteasome. It begins with recognition of the ER-resident protein, includes retrotranslocation (dislocation) of the protein from the ER to the cytosol, protein modifications necessary for correct substrate transfer (e.g. ubiquitination), transport of the protein to the proteasome, and ends with degradation of the protein by the cytoplasmic proteasome.","definition_xrefs":["PMID:21969857","GOC:PARL","GOC:bf","PMID:20940304"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasomal protein catabolic process","termid":"GO:0010498"},{"relation_name":"is_a","term_name":"response to endoplasmic reticulum stress","termid":"GO:0034976"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":41,"genes_by_uniquename":{"SJAG_00126":null,"SJAG_00131":null,"SJAG_00403":null,"SJAG_00530":null,"SJAG_00627":null,"SJAG_00681":null,"SJAG_00766":null,"SJAG_00790":null,"SJAG_00931":null,"SJAG_00941":null,"SJAG_00948":null,"SJAG_01051":null,"SJAG_01134":null,"SJAG_01528":null,"SJAG_01585":null,"SJAG_01626":null,"SJAG_01656":null,"SJAG_01709":null,"SJAG_01768":null,"SJAG_01854":null,"SJAG_01858":null,"SJAG_02244":null,"SJAG_02539":null,"SJAG_02685":null,"SJAG_02694":null,"SJAG_02774":null,"SJAG_03032":null,"SJAG_03153":null,"SJAG_03227":null,"SJAG_03345":null,"SJAG_03657":null,"SJAG_03841":null,"SJAG_04345":null,"SJAG_04384":null,"SJAG_04429":null,"SJAG_04583":null,"SJAG_04612":null,"SJAG_04904":null,"SJAG_05022":null,"SJAG_05274":null,"SJAG_07000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0030163"},{"rel_name":"part_of","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"ERAD pathway","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"ER-associated degradation pathway","type":"related"},{"name":"endoplasmic reticulum-associated degradation","type":"exact"},{"name":"endoplasmic reticulum-associated protein degradation pathway","type":"related"},{"name":"protein degradation by ERAD","type":"exact"}],"termid":"GO:0036503","terms_by_termid":{"GO:0030970":null,"GO:0036503":null,"GO:0097466":null,"GO:1904293":null}}


id: GO:0051169
data:
  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id: MONDO:0009310
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any chronic granulomatous disease in which the cause of the disease is a mutation in the NCF2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic granulomatous disease","termid":"MONDO:0018305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"granulomatous disease, chronic, autosomal recessive, cytochrome b-positive, type 2","secondary_identifiers":["NANDO:2201282","UMLS:C1856245","DOID:0070191","GARD:15177","MEDGEN:383869","OMIM:233710","MESH:C565531"],"synonyms":[{"name":"CDG2","type":"related"},{"name":"CGD, autosomal recessive cytochrome B-positive, type 2","type":"related"},{"name":"NCF2 chronic granulomatous disease","type":"exact"},{"name":"Ncf2, deficiency of","type":"related"},{"name":"P67-PHOX, deficiency of","type":"related"},{"name":"chronic granulomatous disease 2, autosomal recessive","type":"exact"},{"name":"chronic granulomatous disease caused by mutation in NCF2","type":"exact"},{"name":"granulomatous disease, chronic, autosomal recessive, cytochrome b-POSITIVE, type II","type":"related"},{"name":"granulomatous disease, chronic, autosomal recessive, cytochrome b-positive, type 2","type":"exact"},{"name":"granulomatous disease, chronic, due to Ncf2 deficiency","type":"related"},{"name":"neutrophil cytosol Factor 2, deficiency of","type":"related"}],"termid":"MONDO:0009310","xrefs":{"Monarch":{"xref_id":"0009310"}}}


id: GO:0031165
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the contractile vacuolar membrane consisting of gene products that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.","definition_xrefs":["GOC:pg","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of contractile vacuolar membrane (obsolete GO:0031165)","synonyms":[{"name":"integral to contractile vacuolar membrane","type":"exact"}],"termid":"GO:0031165"}


id: PBO:0041018
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BPI fold containing family B member 1","termid":"PBO:0041018"}


id: GO:0031628
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an opioid receptor.","definition_xrefs":["GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"opioid receptor binding","termid":"GO:0031628"}


id: GO:0120230
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  {"annotated_genes":["SJAG_03751","SJAG_04950"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80570,90301],"is_not":false,"summary":null,"term":"GO:0120230"}]},"cv_name":"molecular_function","definition":"Binds to and increases the activity of a recombinase.","definition_xrefs":["GOC:mah","PMID:32414915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03751":null,"SJAG_04950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0030234","GO:0098772","GO:0140677","GO:0003674"],"is_obsolete":false,"name":"recombinase activator activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0120230","terms_by_termid":{"GO:0120230":null}}


id: PBO:0087749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the THO complex; THO is required for efficient transcription elongation and involved in transcriptional elongation-associated recombination; required for LacZ RNA expression from certain plasmids","termid":"PBO:0087749"}


id: PBO:0086764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; separated from neighboring gene, YAP7, by frame shift and corresponds to C-terminal part of YAP7 orthologs in other species; identified as interacting with Hsc82p and Hsp82p in high-throughput two-hybrid screens","termid":"PBO:0086764"}


id: MONDO:0006110
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete bladder adenocarcinoma (obsolete MONDO:0006110)","termid":"MONDO:0006110","xrefs":{"Monarch":{"xref_id":"0006110"}}}


id: PBO:0057819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3139","termid":"PBO:0057819"}


id: PBO:0051019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin like growth factor binding protein acid labile subunit","termid":"PBO:0051019"}


id: PBO:0011491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"supeoxide dismutase mitochondrial ribosomal protein subunit (predicted)","termid":"PBO:0011491"}


id: MONDO:0013176
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Weill-Marchesani syndrome","termid":"MONDO:0018096"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Weill-Marchesani 4 syndrome, recessive","secondary_identifiers":["Orphanet:363992","GARD:17579","MESH:C567710","OMIM:613195","UMLS:C2750787","MEDGEN:416383"],"synonyms":[{"name":"15q26.3 microdeletion syndrome","type":"exact"},{"name":"WMS4","type":"exact"},{"name":"Weill-Marchesani syndrome 4","type":"exact"},{"name":"Weill-Marchesani-like syndrome","type":"exact"},{"name":"ichthyosis-short stature-brachydactyly-microspherophakia syndrome","type":"exact"}],"termid":"MONDO:0013176","xrefs":{"Monarch":{"xref_id":"0013176"}}}


id: GO:2000318
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of T-helper 17 type immune response.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002824"},{"relation_name":"is_a","term_name":"regulation of T-helper 17 type immune response","termid":"GO:2000316"},{"relation_name":"positively_regulates","term_name":"T-helper 17 type immune response","termid":"GO:0072538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of T-helper 17 type immune response","synonyms":[{"name":"positive regulation of Th17 immune response","type":"exact"}],"termid":"GO:2000318"}


id: MONDO:1012075
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiple exostoses, non-human animal","termid":"MONDO:1011944"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple exostoses, pig","secondary_identifiers":["OMIA:000354-9823"],"termid":"MONDO:1012075","xrefs":{"Monarch":{"xref_id":"1012075"}}}


id: PBO:0110492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 37","termid":"PBO:0110492"}


id: FYPO:0007986
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed during mitotic interphase in which the localization of a protein to the microtubule overlap of cytoplasmic microtubule bundles is decreased.","definition_xrefs":["PomBase:mlr","PMID:19879140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to interphase microtubule","termid":"FYPO:0006182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to interphase microtubule bundle overlap","termid":"FYPO:0007986"}


id: MONDO:0001695
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ectropion","termid":"MONDO:0002043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"senile ectropion","secondary_identifiers":["ICD9:374.11","DOID:13356","MEDGEN:509841","UMLS:C0155193","SCTID:71659009"],"synonyms":[{"name":"involutional ectropion","type":"exact"}],"termid":"MONDO:0001695","xrefs":{"Monarch":{"xref_id":"0001695"}}}


id: PBO:0043135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 3","termid":"PBO:0043135"}


id: GO:0060365
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the coronal suture is generated and organized.","definition_xrefs":["GOC:dph","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial suture morphogenesis","termid":"GO:0060363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"coronal suture morphogenesis","termid":"GO:0060365"}


id: GO:0097150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in by an organism or tissue maintains a population of neuronal stem cells.","definition_xrefs":["CL:0000047","GOC:yaf","GOC:dos","PMID:11399758"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stem cell population maintenance","termid":"GO:0019827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuronal stem cell population maintenance","termid":"GO:0097150"}


id: MOD:00862
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to D-alanine.","definition_xrefs":["PubMed:7961627","ChEBI:29949","PubMed:7287302","RESID:AA0191"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stereoisomerized residue","termid":"MOD:00664"},{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-alanine","synonyms":[{"name":"(R)-2-aminopropanoic acid","type":"exact"},{"name":"D-alanine","type":"exact"},{"name":"MOD_RES D-alanine (Ala)","type":"exact"},{"name":"MOD_RES D-alanine (Ser)","type":"exact"}],"termid":"MOD:00862"}


id: PBO:0038554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABHD17A pseudogene 9","termid":"PBO:0038554"}


id: GO:0080072
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a sinapoyl group to a nitrogen atom on the spermidine molecule.","definition_xrefs":["PMID:19077165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"spermidine:sinapoyl CoA N-acyltransferase activity","termid":"GO:0080072"}


id: PBO:0068996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 240, pseudogene","termid":"PBO:0068996"}


id: PBO:0029700
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_nucleoside_diphosphate_kinase_activity","termid":"PBO:0029700"}


id: GO:0002382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of the tissue kallikrein-kinin cascade.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of kinin cascade","termid":"GO:0002256"},{"relation_name":"regulates","term_name":"tissue kallikrein-kinin cascade","termid":"GO:0002255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0051604","GO:0008150"],"is_obsolete":false,"name":"regulation of tissue kallikrein-kinin cascade","synonyms":[{"name":"regulation of glandular kallikrein-kinin cascade","type":"exact"}],"termid":"GO:0002382"}


id: GO:0001002
data:
  {"annotated_genes":["SJAG_03354"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71547],"is_not":false,"summary":null,"term":"GO:0001002"}]},"cv_name":"molecular_function","definition":"Binding to a sequence of DNA that is a part of a type 1 promoter that controls transcription by RNA polymerase III. Type 1 promoters are found in 5S rRNA genes, downstream of the transcription start site within the sequence of the mature RNA, and require TFIIIA for recognition.","definition_xrefs":["PMID:12381659","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase III cis-regulatory region sequence-specific DNA binding","termid":"GO:0000992"},{"relation_name":"is_a","term_name":"5S rDNA binding","termid":"GO:0080084"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03354":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0000976"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0000976","GO:0003674","GO:0005488","GO:0003677"],"is_obsolete":false,"name":"RNA polymerase III type 1 promoter sequence-specific DNA binding","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0001030"],"synonyms":[{"name":"RNA polymerase III type 1 promoter DNA binding","type":"related"}],"termid":"GO:0001002","terms_by_termid":{"GO:0001002":null}}


id: RO:0002241
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A broad relationship between an exposure event or process and any agent, stimulus, activity, or event that causes stress or tension on an organism and interacts with an exposure receptor during an exposure event.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_exposure_stimulus","termid":"RO:0002309"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_exposure_stressor","termid":"RO:0002241"}


id: PBO:0081465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 335","termid":"PBO:0081465"}


id: PBO:0091934
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase P cleavage specificity not affected by sequences flanking the G+1 cleavage site","termid":"PBO:0091934"}


id: PBO:0055412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2842","termid":"PBO:0055412"}


id: MONDO:0001984
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A candidiasis that results in fungal infection of the outer-most layer located in nail, has material basis in Candida species. The infection causes painful, red, swollen area around the nail, often at the cuticle or at the site of a hangnail or other injury.","definition_xrefs":["DOID:14512"],"direct_ancestors":[{"relation_name":"is_a","term_name":"candidiasis","termid":"MONDO:0002026"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"candidal paronychia","secondary_identifiers":["MEDGEN:705794","SCTID:187014000","UMLS:C1282977","ICD9:112.3"],"synonyms":[{"name":"candidiasis of skin","type":"exact"},{"name":"candidiasis of skin and nails","type":"exact"}],"termid":"MONDO:0001984","xrefs":{"Monarch":{"xref_id":"0001984"}}}


id: MONDO:0800443
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neurodevelopmental disorder characterized predominantly by intellectual disability, speech delay, motor delay, autism, sleep disturbances, and a high pain threshold. This disorder may be inherited in an autosomal dominant or autosomal recessive manner, likely due to mono-allelic variant resulting in altered function and bi-allelic variants resulting in loss of function, respectively.","definition_xrefs":["PMID:30923367"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex neurodevelopmental disorder","termid":"MONDO:0100038"},{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"DEAF1-associated neurodevelopmental disorder","termid":"MONDO:0800443","xrefs":{"Monarch":{"xref_id":"0800443"}}}


id: GO:0047322
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [3-hydroxy-3-methylglutaryl-CoA reductase (NADPH)] + ATP = [3-hydroxy-3-methylglutaryl-CoA reductase (NADPH)] phosphate + ADP.","definition_xrefs":["EC:2.7.11.31"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016301","GO:0016740","GO:0140096","GO:0003824","GO:0004672","GO:0003674"],"is_obsolete":false,"name":"[hydroxymethylglutaryl-CoA reductase (NADPH)] kinase activity","secondary_identifiers":["MetaCyc:2.7.1.109-RXN"],"synonyms":[{"name":"3-hydroxy-3-methylglutaryl coenzyme A reductase kinase activity","type":"related"},{"name":"3-hydroxy-3-methylglutaryl-CoA reductase kinase activity","type":"related"},{"name":"AMPK","type":"related"},{"name":"ATP:hydroxymethylglutaryl-CoA reductase (NADPH) phosphotransferase activity","type":"related"},{"name":"HMG-CoA reductase kinase activity","type":"related"},{"name":"STK29","type":"related"},{"name":"beta-hydroxy-beta-methylglutaryl-CoA reductase kinase activity","type":"related"},{"name":"hydroxymethylglutaryl coenzyme A reductase kinase (phosphorylating) activity","type":"related"},{"name":"hydroxymethylglutaryl coenzyme A reductase kinase activity","type":"related"},{"name":"hydroxymethylglutaryl-CoA reductase (NADPH) kinase activity","type":"related"},{"name":"hydroxymethylglutaryl-CoA reductase (NADPH2) kinase activity","type":"related"},{"name":"hydroxymethylglutaryl-CoA reductase kinase activity","type":"related"},{"name":"reductase kinase activity","type":"broad"}],"termid":"GO:0047322"}


id: PBO:0055014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2429","termid":"PBO:0055014"}


id: PBO:0005345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sed5 Vesicle Protein Svp26 (predicted)","termid":"PBO:0005345"}


id: MONDO:0003151
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete movement disease (obsolete MONDO:0003151)","termid":"MONDO:0003151","xrefs":{"Monarch":{"xref_id":"0003151"}}}


id: GO:0008299
data:
  {"annotated_genes":["SJAG_00413","SJAG_03349","SJAG_04568","SJAG_00624","SJAG_01865","SJAG_04499","SJAG_04865","SJAG_06603","SJAG_00580","SJAG_04307","SJAG_03715","SJAG_02719","SJAG_01474","SJAG_03352","SJAG_03360"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80548,100197],"is_not":false,"summary":null,"term":"GO:0008299"},{"annotations":[111329,76044,96258,116766,81863,115608,103700,101412,108362,90509],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010142"},{"annotations":[101413,111330],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033386"},{"annotations":[76416],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0009240"},{"annotations":[81915,76046,78908,116767],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0019287"},{"annotations":[113164],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902767"},{"annotations":[62587,67818],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016104"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of an isoprenoid compound, isoprene (2-methylbuta-1,3-diene) or compounds containing or derived from linked isoprene (3-methyl-2-butenylene) residues.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoprenoid metabolic process","termid":"GO:0006720"},{"relation_name":"is_a","term_name":"lipid biosynthetic process","termid":"GO:0008610"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00413":null,"SJAG_00580":null,"SJAG_00624":null,"SJAG_01474":null,"SJAG_01865":null,"SJAG_02719":null,"SJAG_03349":null,"SJAG_03352":null,"SJAG_03360":null,"SJAG_03715":null,"SJAG_04307":null,"SJAG_04499":null,"SJAG_04568":null,"SJAG_04865":null,"SJAG_06603":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"isoprenoid biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:POLYISOPRENSYN-PWY","GO:0009241"],"synonyms":[{"name":"isoprenoid anabolism","type":"exact"},{"name":"isoprenoid biosynthesis","type":"exact"},{"name":"isoprenoid formation","type":"exact"},{"name":"isoprenoid synthesis","type":"exact"},{"name":"polyisoprenoid anabolism","type":"narrow"},{"name":"polyisoprenoid biosynthesis","type":"narrow"},{"name":"polyisoprenoid biosynthetic process","type":"narrow"},{"name":"polyisoprenoid formation","type":"narrow"},{"name":"polyisoprenoid synthesis","type":"narrow"},{"name":"polyterpene biosynthesis","type":"narrow"},{"name":"polyterpene biosynthetic process","type":"narrow"}],"termid":"GO:0008299","terms_by_termid":{"GO:0008299":null,"GO:0009240":null,"GO:0010142":null,"GO:0016104":null,"GO:0019287":null,"GO:0033386":null,"GO:1902767":null}}


id: PBO:0081730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 660","termid":"PBO:0081730"}


id: GO:0110022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiac muscle myoblast proliferation.","definition_xrefs":["GOC:BHF_miRNA","PMID:26512644","GOC:rph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myoblast proliferation","termid":"GO:2000291"},{"relation_name":"regulates","term_name":"cardiac muscle myoblast proliferation","termid":"GO:0110021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac muscle myoblast proliferation","termid":"GO:0110022"}


id: PBO:0054969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2383","termid":"PBO:0054969"}


id: MONDO:0010188
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ataxia with vitamin E deficiency (AVED) is a neurodegenerative disease belonging to the inherited cerebellar ataxias. It is mainly characterized by progressive spino-cerebellar ataxia, loss of proprioception, areflexia, and is associated with a marked deficiency in vitamin E.","definition_xrefs":["Orphanet:96"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn vitamin metabolic disorder","termid":"MONDO:0005528"},{"relation_name":"is_a","term_name":"autosomal recessive metabolic cerebellar ataxia","termid":"MONDO:0020044"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005066","MONDO:0005244","MONDO:0006025"],"is_obsolete":false,"name":"familial isolated deficiency of vitamin E","secondary_identifiers":["NORD:817","OMIM:277460","ICD9:269.1","MEDGEN:341248","ICD9:334.3","DOID:0090028","MESH:C535393","NANDO:1200050","SCTID:702442008","MedDRA:10047631","UMLS:C1848533","GARD:8595"],"synonyms":[{"name":"AVED","type":"exact"},{"name":"Ataxia with Vitamin E Deficiency","type":"exact"},{"name":"Friedreich-like ataxia","type":"exact"},{"name":"Friedreich-like ataxia with selective vitamin E deficiency","type":"related"},{"name":"VED","type":"related"},{"name":"ataxia with isolated vitamin E deficiency","type":"exact"},{"name":"ataxia with vitamin E deficiency","type":"related"},{"name":"ataxia, Friedreich-like, with selective vitamin E deficiency","type":"related"},{"name":"familial isolated deficiency of vitamin type E","type":"exact"},{"name":"familial isolated vitamin E deficiency","type":"exact"},{"name":"isolated vitamin E deficiency","type":"exact"},{"name":"vitamin E, familial isolated deficiency OF","type":"related"}],"termid":"MONDO:0010188","xrefs":{"Monarch":{"xref_id":"0010188"}}}


id: MONDO:0011382
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sickle cell anemias are chronic hemolytic diseases that may induce three types of acute accidents: severe anemia, severe bacterial infections, and ischemic vasoocclusive accidents (VOA) caused by sickle-shaped red blood cells obstructing small blood vessels and capillaries. Many diverse complications can occur.","definition_xrefs":["Orphanet:232"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"congenital hypogonadotropic hypogonadism","termid":"MONDO:0015770"},{"relation_name":"excluded_subClassOf","term_name":"secondary avascular necrosis","termid":"MONDO:0018374"},{"relation_name":"excluded_subClassOf","term_name":"obsolete avascular necrosis of genetic origin (obsolete MONDO:0018384)","termid":"MONDO:0018384"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"inherited hemoglobinopathy","termid":"MONDO:0019050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005570"],"is_obsolete":false,"name":"sickle cell disease","secondary_identifiers":["OMIM:603903","NCIT:C34383","ICD9:282.6","MEDGEN:287","NORD:1714","UMLS:C0002895","DOID:0081445","GARD:8614","ICD9:282.60","NANDO:2200624","ICD10CM:D57.2","MESH:D000755","DOID:10923","ICD9:282.63","MedDRA:10040641"],"synonyms":[{"name":"HPA 1 recognition polymorphism, beta-globin-related","type":"related"},{"name":"HPA1","type":"related"},{"name":"Haemoglobin S disease","type":"related"},{"name":"Haemoglobin S disease without crisis","type":"exact"},{"name":"Hb SC disease","type":"exact"},{"name":"Hb-S/Hb-C disease","type":"exact"},{"name":"Hb-SS disease without crisis","type":"exact"},{"name":"HbS disease","type":"related"},{"name":"Hemoglobin S disease","type":"related"},{"name":"Hemoglobin S disease without crisis","type":"exact"},{"name":"Sickle Cell Disease","type":"exact"},{"name":"drepanocytosis","type":"exact"},{"name":"haemoglobin SC disease","type":"exact"},{"name":"hemoglobin SC disease","type":"exact"},{"name":"restriction fragment length polymorphism, sickle cell Anemia-related","type":"related"},{"name":"sickle cell anemia","type":"exact"},{"name":"sickle cell disease","type":"exact"},{"name":"sickle-cell/Hb-C disease without crisis","type":"exact"},{"name":"sickling disorder due to Haemoglobin S","type":"exact"},{"name":"sickling disorder due to Hemoglobin S","type":"exact"}],"termid":"MONDO:0011382","xrefs":{"Monarch":{"xref_id":"0011382"}}}


id: FYPO:0007259
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of meiotic spindle pole body duplication is increased.","definition_xrefs":["PomBase:mah","PMID:22438582"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic spindle pole body duplication","termid":"FYPO:0007258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0001985","FYPO:0005447","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"increased meiotic spindle pole body duplication","synonyms":[{"name":"increased meiotic SPB duplication","type":"exact"},{"name":"increased spindle pole body duplication during meiotic cell cycle","type":"related"},{"name":"meiotic SPB overamplification","type":"exact"}],"termid":"FYPO:0007259"}


id: PBO:0048424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamyl-tRNA amidotransferase subunit C","termid":"PBO:0048424"}


id: GO:0141157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts the normal execution of  host exocytosis. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:17185412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host vesicle-mediated transport","termid":"GO:1990215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host exocytosis","termid":"GO:0141157"}


id: FYPO:0002694
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of hygromycin B than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0005447","FYPO:0000139","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"resistance to hygromycin B","synonyms":[{"name":"resistance to hygromycin B during mitotic cell cycle","type":"related"},{"name":"resistance to hygromycin B during vegetative growth","type":"exact"},{"name":"resistant to hygromycin B","type":"exact"}],"termid":"FYPO:0002694"}


id: MONDO:0018406
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare male infertility due to adrenal disorder of genetic origin (obsolete MONDO:0018406)","secondary_identifiers":["Orphanet:399994"],"termid":"MONDO:0018406","xrefs":{"Monarch":{"xref_id":"0018406"}}}


id: GO:0019435
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sophorosyloxydocosanoate, 13-sophorosyloxydocosanoate 6',6''-diacetate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolipid biosynthetic process","termid":"GO:0009247"},{"relation_name":"is_a","term_name":"sophorosyloxydocosanoate metabolic process","termid":"GO:0019434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"sophorosyloxydocosanoate biosynthetic process","secondary_identifiers":["MetaCyc:SOPHOROSYLOXYDOCOSANOATE-SYN-PWY"],"synonyms":[{"name":"sophorosyloxydocosanoate anabolism","type":"exact"},{"name":"sophorosyloxydocosanoate biosynthesis","type":"exact"},{"name":"sophorosyloxydocosanoate formation","type":"exact"},{"name":"sophorosyloxydocosanoate synthesis","type":"exact"}],"termid":"GO:0019435"}


id: GO:0031706
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a subtype 3 bombesin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bombesin receptor binding","termid":"GO:0031705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"subtype 3 bombesin receptor binding","synonyms":[{"name":"subtype 3 bombesin receptor ligand","type":"narrow"}],"termid":"GO:0031706"}


id: PBO:0063086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progestin and adipoQ receptor family member 5","termid":"PBO:0063086"}


id: MONDO:0018825
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"PYCR2-related microcephaly-progressive leukoencephalopathy is a rare, genetic, syndromic intellectual disability disorder characterized by progressive postnatal microcephaly, cerebral hypomyelination and severe psychomotor developmental delayed with absent speech, as well as axial hypotonia, appendicular hypertonia with hyperextensibility of the wrists and ankles, hyperreflexia, severe muscle wasting and failure to thrive. Associated craniofacial dysmorphism includes triangular facies with bitemporal narrowing, down- or upslanting palpebral fissures, malar hypoplasia, large malformed ears with overfolded helices, upturned bulbous nose, long smooth philtrum and thin vermilion borders.","definition_xrefs":["Orphanet:481152"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PYCR2-related microcephaly-progressive leukoencephalopathy","secondary_identifiers":["GARD:17873"],"termid":"MONDO:0018825","xrefs":{"Monarch":{"xref_id":"0018825"}}}


id: PBO:0063783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger protein 8","termid":"PBO:0063783"}


id: PBO:0041934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBX3 pseudogene 2","termid":"PBO:0041934"}


id: GO:0018248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of an enzyme active site via transient sulfation of peptidyl-cysteine to form S-sulfo-L-cysteine.","definition_xrefs":["RESID:AA0171"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via peptidyl cysteine sulfation (obsolete GO:0018248)","synonyms":[{"name":"enzyme active site formation via S-sulpho-L-cysteine","type":"exact"}],"termid":"GO:0018248"}


id: GO:0030502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of bone mineralization.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of ossification","termid":"GO:0030279"},{"relation_name":"is_a","term_name":"regulation of bone mineralization","termid":"GO:0030500"},{"relation_name":"is_a","term_name":"negative regulation of biomineral tissue development","termid":"GO:0070168"},{"relation_name":"negatively_regulates","term_name":"bone mineralization","termid":"GO:0030282"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of bone mineralization","synonyms":[{"name":"down regulation of bone mineralization","type":"exact"},{"name":"down-regulation of bone mineralization","type":"exact"},{"name":"downregulation of bone mineralization","type":"exact"},{"name":"inhibition of bone mineralization","type":"narrow"}],"termid":"GO:0030502"}


id: GO:0061072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the iris is generated and organized. The iris is an anatomical structure in the eye whose opening forms the pupil. The iris is responsible for controlling the diameter and size of the pupil and the amount of light reaching the retina.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"camera-type eye morphogenesis","termid":"GO:0048593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"iris morphogenesis","termid":"GO:0061072"}


id: PBO:0051304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1/OR-2 (pseudogene)","termid":"PBO:0051304"}


id: MONDO:0011312
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial papillary or follicular thyroid carcinoma","termid":"MONDO:0017895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"thyroid carcinoma, nonmedullary, with or without cell oxyphilia","secondary_identifiers":["MEDGEN:400409","UMLS:C1863925","MESH:C537842","GARD:15354","OMIM:603386"],"synonyms":[{"name":"TCO","type":"related"},{"name":"TCO 1","type":"related"},{"name":"TCO1","type":"related"},{"name":"nonmedullary thyroid carcinoma, with or without cell oxyphilia","type":"related"},{"name":"thyroid carcinoma, nonmedullary, with cell oxyphilia","type":"exact"},{"name":"thyroid carcinoma, nonmedullary, with or without cell oxyphilia","type":"exact"}],"termid":"MONDO:0011312","xrefs":{"Monarch":{"xref_id":"0011312"}}}


id: PBO:0054381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1777","termid":"PBO:0054381"}


id: MONDO:0000954
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cancer involving a Meckel's diverticulum.","definition_xrefs":["MONDO:patterns/cancer"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ileum cancer","termid":"MONDO:0000955"},{"relation_name":"is_a","term_name":"Meckel diverticulum neoplasm","termid":"MONDO:0021082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"Meckel diverticulum cancer","secondary_identifiers":["SCTID:187752007","UMLS:C0153429","DOID:10152","ICD9:152.3","MEDGEN:509288"],"synonyms":[{"name":"Meckel diverticulum cancer","type":"exact"},{"name":"Meckel's diverticulum cancer","type":"exact"},{"name":"cancer of Meckel's diverticulum","type":"exact"},{"name":"malignant Meckel's diverticulum neoplasm","type":"exact"},{"name":"malignant neoplasm of Meckel's diverticulum","type":"exact"}],"termid":"MONDO:0000954","xrefs":{"Monarch":{"xref_id":"0000954"}}}


id: PBO:0053347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 235","termid":"PBO:0053347"}


id: PBO:0072667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticulon 4 receptor like 2","termid":"PBO:0072667"}


id: PBO:0031407
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-spheroid_vegetative_cell","termid":"PBO:0031407"}


id: GO:0097138
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex consisting of BAD and BCL-2, members of the Bcl-2 family of anti- and proapoptotic regulators.","definition_xrefs":["GOC:so","PMID:14634621"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bcl-2 family protein complex","termid":"GO:0097136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"BAD-BCL-2 complex","termid":"GO:0097138"}


id: PBO:0003524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk31 (predicted)","termid":"PBO:0003524"}


id: GO:0005833
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An iron-containing, oxygen carrying complex. In vertebrates it is made up of two pairs of associated globin polypeptide chains, each chain carrying a noncovalently bound heme prosthetic group.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005829"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005829","GO:0005575"],"is_obsolete":false,"name":"hemoglobin complex","synonyms":[{"name":"haemoglobin complex","type":"exact"}],"termid":"GO:0005833"}


id: FYPO:0008129
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the posttranscriptional addition of two methyl groups to the N2 position of a guanine residue in a tRNA molecule is increased. Normally, two methyl groups are transferred to the G26 residue.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal tRNA methylation","termid":"FYPO:0001766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0006551","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased tRNA guanosine N2,N2-dimethylation","termid":"FYPO:0008129"}


id: FYPO_EXT:0000003
data:
  {"annotation_feature_type":"gene","cv_name":"fypo_extensions","definition":"small fraction of cells (penetrance) or weak phenotype (severity)","definition_xrefs":["PomBase:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FYPO severity extension","termid":"FYPO_EXT:1000001"},{"relation_name":"is_a","term_name":"FYPO penetrance extension","termid":"FYPO_EXT:1000002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"low","termid":"FYPO_EXT:0000003"}


id: GO:0034904
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 5-chloro-2-oxopent-4-enoate + H2O = 5-chloro-4-hydroxy-2-oxopentanate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 5-chloro-2-oxopent-4-enoate hydratase activity (obsolete GO:0034904)","termid":"GO:0034904"}


id: MONDO:0022330
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004335"],"is_obsolete":false,"name":"4-hydroxyphenylacetic aciduria","secondary_identifiers":["MEDGEN:376417","MESH:C535315","GARD:8155","UMLS:C1848680"],"termid":"MONDO:0022330","xrefs":{"Monarch":{"xref_id":"0022330"}}}


id: PBO:0072938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small Cajal body-specific RNA 18","termid":"PBO:0072938"}


id: PBO:0016580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial iron ion transporter Mmt1 (predicted)","termid":"PBO:0016580"}


id: MONDO:0013310
data:
  {"annotated_genes":["SJAG_04270"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89062],"is_not":false,"summary":null,"term":"MONDO:0013310"}]},"cv_name":"mondo","definition":"Congenital adrenal hyperplasia due to cytochrome P450 oxidoreductase deficiency is a unique form of congenital adrenal hyperplasia (CAH) characterized by glucocorticoid deficiency, severe sexual ambiguity in both sexes and skeletal (especially craniofacial) malformations.","definition_xrefs":["Orphanet:95699"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive system disorder","termid":"MONDO:0005039"},{"relation_name":"is_a","term_name":"congenital adrenal hyperplasia","termid":"MONDO:0018479"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"congenital adrenal hyperplasia due to cytochrome P450 oxidoreductase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080925","NANDO:2200375","NCIT:C174439","UMLS:C1860042","MEDGEN:348008","NANDO:1200402","GARD:12664","SCTID:715733000","OMIM:613571","icd11.foundation:497412536"],"synonyms":[{"name":"POR deficiency","type":"exact"},{"name":"PORD","type":"exact"},{"name":"adrenal hyperplasia, congenital, due to cytochrome P450 oxidoreductase deficiency","type":"related"},{"name":"congenital adrenal hyperplasia due to cytochrome POR deficiency","type":"exact"},{"name":"disordered steroidogenesis due to POR deficiency","type":"related"},{"name":"disordered steroidogenesis due to cytochrome P450 oxidoreductase","type":"related"},{"name":"disordered steroidogenesis due to cytochrome P450 oxidoreductase deficiency","type":"related"}],"termid":"MONDO:0013310","terms_by_termid":{"MONDO:0013310":null},"xrefs":{"Monarch":{"xref_id":"0013310"}}}


id: PBO:0067814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 116","termid":"PBO:0067814"}


id: FYPO:0006184
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more messenger RNAs that are normally expressed during a cellular response to osmotic stress measured in a cell differs from normal (i.e. is higher or lower than observed in wild-type cells during vegetative growth).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of stress responsive gene mRNA during vegetative growth","termid":"FYPO:0004363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"altered level of osmotic stress responsive gene mRNA during vegetative growth","synonyms":[{"name":"abnormal level of osmotic stress responsive gene mRNA during vegetative growth","type":"exact"},{"name":"altered level of cellular response to osmotic stress responsive gene mRNA","type":"exact"},{"name":"altered level of osmotic stress responsive gene RNA during vegetative growth","type":"exact"},{"name":"altered level of osmotic stress responsive gene mRNA during mitotic cell cycle","type":"related"},{"name":"altered level of osmotic stress responsive gene transcripts during vegetative growth","type":"exact"},{"name":"altered mRNA level of osmotic stress responsive genes during vegetative growth","type":"exact"},{"name":"altered osmotic stress responsive gene mRNA accumulation during vegetative growth","type":"related"}],"termid":"FYPO:0006184"}


id: PBO:0049192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate ionotropic receptor AMPA type subunit 3","termid":"PBO:0049192"}


id: PBO:0043957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin gamma B","termid":"PBO:0043957"}


id: PBO:0066796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 95","termid":"PBO:0066796"}


id: MONDO:0003195
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, serous adenocarcinoma that arises from the lining of the peritoneum. It affects females. The clinical behavior and pathologic characteristics are similar to the serous adenocarcinoma that arises from the ovary.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peritoneal carcinoma","termid":"MONDO:0002113"},{"relation_name":"is_a","term_name":"serous adenocarcinoma","termid":"MONDO:0005278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"peritoneal serous adenocarcinoma","secondary_identifiers":["DOID:4901","NCIT:C40023"],"synonyms":[{"name":"peritoneum serous adenocarcinoma","type":"exact"},{"name":"primary peritoneal serous adenocarcinoma","type":"narrow"}],"termid":"MONDO:0003195","xrefs":{"Monarch":{"xref_id":"0003195"}}}


id: PBO:0010216
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"related to S. pombe SPAC521.02 and S. cerevisiae YHR134W, but has an additional N-terminal ubiquitin family domain","termid":"PBO:0010216"}


id: GO:0002247
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events leading to removal of necrotic debris that contribute to an inflammatory response.","definition_xrefs":["ISBN:0721601871","GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue remodeling","termid":"GO:0048771"},{"relation_name":"part_of","term_name":"wound healing involved in inflammatory response","termid":"GO:0002246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"clearance of damaged tissue involved in inflammatory response wound healing","synonyms":[{"name":"clearance of damaged tissue during inflammatory response","type":"related"}],"termid":"GO:0002247"}


id: PBO:0061710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear transport factor 2 pseudogene 5","termid":"PBO:0061710"}


id: GO:0070191
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: L-methionine R-oxide + thioredoxin = L-methionine + thioredoxin disulfide; can act on free oxidized methionine with specificity for the R enantiomer; does not act on oxidized methionine in peptide linkage. Thioredoxin disulfide is the oxidized form of thioredoxin.","definition_xrefs":["PMID:17535911","PMID:19049972","GOC:mcc"],"gene_count":0,"genotype_count":0,"name":"obsolete methionine-R-sulfoxide reductase activity (obsolete GO:0070191)","termid":"GO:0070191"}


id: GO:0033521
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phytyl diphosphate, (2E)-3,7,11,15-tetramethylhexadec-2-en-1-yl trihydrogen diphosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid biosynthetic process","termid":"GO:0008654"},{"relation_name":"is_a","term_name":"terpenoid biosynthetic process","termid":"GO:0016114"},{"relation_name":"is_a","term_name":"phytyl diphosphate metabolic process","termid":"GO:0033519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"phytyl diphosphate biosynthetic process","secondary_identifiers":["MetaCyc:PWY-5063"],"synonyms":[{"name":"phytyl diphosphate anabolism","type":"exact"},{"name":"phytyl diphosphate biosynthesis","type":"exact"},{"name":"phytyl diphosphate formation","type":"exact"},{"name":"phytyl diphosphate synthesis","type":"exact"}],"termid":"GO:0033521"}


id: MONDO:0012117
data:
  {"annotated_genes":["SJAG_00334"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88227],"is_not":false,"summary":null,"term":"MONDO:0012117"},{"annotations":[89065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009890"}]},"cv_name":"mondo","definition":"A form of congenital disorders of N-linked glycosylation characterized by progressive microcephaly, hypotonia, developmental delay, drug-resistant infantile epilepsy, and hepatomegaly. Additional features that may be observed include failure to thrive, pericardial effusion, renal cysts, skeletal dysplasia, facial dysmorphism (frontal bossing, hypertelorism, depressed nasal bridge, low-seated ears, large mouth) and hydrops fetalis. The disease is caused by loss-of-function mutations in the gene ALG9 (11q23).","definition_xrefs":["Orphanet:79328"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type I","termid":"MONDO:0005500"},{"relation_name":"is_a","term_name":"disorder of protein N-glycosylation","termid":"MONDO:0017740"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00334":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"ALG9-congenital disorder of glycosylation","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:9839","MEDGEN:443955","DOID:0080564","MESH:C535750","SCTID:720978005","UMLS:C2931006","OMIM:608776"],"synonyms":[{"name":"ALG9-CDG","type":"exact"},{"name":"ALG9-CDG (CDG-IL)","type":"related"},{"name":"ALG9-congenital disorder of glycosylation","type":"exact"},{"name":"CDG 1L","type":"related"},{"name":"CDG IL","type":"related"},{"name":"CDG syndrome type IL","type":"exact"},{"name":"CDG-IL","type":"exact"},{"name":"CDG1L","type":"exact"},{"name":"carbohydrate deficient glycoprotein syndrome type 1L","type":"exact"},{"name":"carbohydrate deficient glycoprotein syndrome type IL","type":"related"},{"name":"congenital disorder of glycosylation type 1L","type":"exact"},{"name":"congenital disorder of glycosylation type IL","type":"related"},{"name":"congenital disorder of glycosylation, type IL","type":"related"},{"name":"mannosyltransferase 7-9 deficiency","type":"exact"}],"termid":"MONDO:0012117","terms_by_termid":{"MONDO:0009890":null,"MONDO:0012117":null},"xrefs":{"Monarch":{"xref_id":"0012117"}}}


id: GO:0060345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of creating a trabecula in the spleen. A trabecula is a tissue element in the form of a small beam, strut or rod.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trabecula formation","termid":"GO:0060343"},{"relation_name":"part_of","term_name":"spleen development","termid":"GO:0048536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spleen trabecula formation","synonyms":[{"name":"spleen trabecula biogenesis","type":"related"},{"name":"spleen trabeculation","type":"exact"}],"termid":"GO:0060345"}


id: GO:0075079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism activates, maintains or increases the frequency, rate or extent of receptor-mediated signal transduction in the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by host of symbiont receptor-mediated signal transduction (obsolete GO:0075079)","termid":"GO:0075079"}


id: PBO:0063666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"post-GPI attachment to proteins phospholipase 3","termid":"PBO:0063666"}


id: PBO:0071719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 17","termid":"PBO:0071719"}


id: MONDO:0013103
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing epilepsy, idiopathic generalized, in which the cause of the disease is a mutation in the GABRD gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene","MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy, idiopathic generalized, susceptibility to, 10","secondary_identifiers":["UMLS:C2751603","DOID:0111292","MEDGEN:414062","OMIM:613060"],"synonyms":[{"name":"EIG10","type":"exact"},{"name":"GEFS+, type 5, susceptibility to","type":"related"},{"name":"GEFS+5, susceptibility to","type":"related"},{"name":"GEFSP5, susceptibility to","type":"related"},{"name":"epilepsy, idiopathic generalized, 10","type":"exact"},{"name":"epilepsy, idiopathic generalized, susceptibility to, 10","type":"exact"},{"name":"epilepsy, idiopathic generalized, susceptibility to, type 10","type":"exact"},{"name":"epilepsy, juvenile myoclonic, susceptibility to","type":"exact"},{"name":"epilepsy, juvenile myoclonic, susceptibility to, 7","type":"related"},{"name":"generalised epilepsy with febrile seizures plus, type 5, susceptibility to","type":"related"},{"name":"generalized epilepsy with febrile seizures plus, type 5, susceptibility to","type":"related"},{"name":"susceptibility to idiopathic generalised epilepsy 10","type":"exact"},{"name":"susceptibility to idiopathic generalized epilepsy 10","type":"exact"}],"termid":"MONDO:0013103","xrefs":{"Monarch":{"xref_id":"0013103"}}}


id: PBO:0046222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 15","termid":"PBO:0046222"}


id: PBO:0027755
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transcription_from_CDRE_promoter_in_response_to_calcium_ion","termid":"PBO:0027755"}


id: MONDO:0013500
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chronic mucocutaneous candidiasis","termid":"MONDO:0015279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 51","secondary_identifiers":["GARD:15732","MEDGEN:934770","OMIM:613953","DOID:0111996","UMLS:C4310803"],"synonyms":[{"name":"CANDF5","type":"related"},{"name":"IMD51","type":"related"},{"name":"candidiasis, familial chronic mucocutaneous, autosomal recessive","type":"related"},{"name":"candidiasis, familial, 5","type":"related"},{"name":"candidiasis, familial, 5, formerly","type":"related"},{"name":"candidiasis, familial, type 5","type":"related"},{"name":"immunodeficiency 51","type":"exact"}],"termid":"MONDO:0013500","xrefs":{"Monarch":{"xref_id":"0013500"}}}


id: MONDO:0012096
data:
  {"annotated_genes":["SJAG_03815","SJAG_02919","SJAG_04567"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88396,88397,88398],"is_not":false,"summary":null,"term":"MONDO:0012096"}]},"cv_name":"mondo","definition":"Autosomal dominant Charcot-Marie-Tooth disease type 2L (CMT2L) is a form of axonal Charcot-Marie-Tooth disease, a peripheral sensorimotor neuropathy. In the single family reported to date, CMT2L onset is between 15 and 33 years. Patients present with a symmetric distal weakness of legs and occasionally of the hands, absent or reduced tendon reflexes, distal legs sensory loss and frequently a pes cavus. Progression is slow.","definition_xrefs":["Orphanet:99945"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 2","termid":"MONDO:0018993"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02919":null,"SJAG_03815":null,"SJAG_04567":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease axonal type 2L","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:12432","DOID:0110174","MEDGEN:324826","OMIM:608673","SCTID:719513008","UMLS:C1837552"],"synonyms":[{"name":"CMT2L","type":"exact"},{"name":"Charcot-Marie-Tooth disease type 2 caused by mutation in HSPB8","type":"exact"},{"name":"Charcot-Marie-Tooth disease type 2L","type":"related"},{"name":"Charcot-Marie-Tooth disease, axonal, autosomal dominant, type 2L","type":"related"},{"name":"Charcot-Marie-Tooth disease, axonal, type 2L","type":"related"},{"name":"Charcot-Marie-Tooth neuropathy axonal type 2L","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, axonal, type 2L","type":"related"},{"name":"HSPB8 Charcot-Marie-Tooth disease type 2","type":"exact"},{"name":"autosomal dominant Charcot-Marie-Tooth disease type 2L","type":"exact"},{"name":"autosomal dominant axonal Charcot-Marie-Tooth disease type 2L","type":"exact"}],"termid":"MONDO:0012096","terms_by_termid":{"MONDO:0012096":null},"xrefs":{"Monarch":{"xref_id":"0012096"}}}


id: PBO:0042589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CMT1A duplicated region transcript 2","termid":"PBO:0042589"}


id: FYPO:0005235
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at stalled replication forks is abolished.","definition_xrefs":["PomBase:mah","PMID:21945095"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin during vegetative growth","termid":"FYPO:0000452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to chromatin at stalled replication fork","synonyms":[{"name":"abolished protein localisation to chromatin at stalled replication fork during vegetative growth","type":"exact"},{"name":"abolished protein localization to chromatin at stalled replication fork during mitotic cell cycle","type":"related"},{"name":"protein localization to chromatin at stalled replication fork during vegetative growth abolished","type":"exact"}],"termid":"FYPO:0005235"}


id: FYPO:0004752
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of phleomycin than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0005447","FYPO:0001985","FYPO:0002682"],"is_obsolete":false,"name":"resistance to phleomycin","synonyms":[{"name":"resistance to phleomycin during mitotic cell cycle","type":"related"},{"name":"resistance to phleomycin during vegetative growth","type":"exact"},{"name":"resistant to phleomycin","type":"exact"}],"termid":"FYPO:0004752"}


id: PR:O94309
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- git11 gene.","definition_xrefs":["UniProtKB:O94309","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanine nucleotide-binding protein subunit gamma (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC215.04","synonyms":[{"name":"Spom972h-git11","type":"exact"}],"termid":"PR:O94309"}


id: FYPO:0001192
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which vegetative cell growth is normal (i.e. indistinguishable from wild type) in a medium containing one or more enzymes that degrades cell wall polysaccharides.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002057","FYPO:0002060","FYPO:0002058","FYPO:0000257","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on cell wall-degrading enzymes","secondary_identifiers":["FYPO:0001193"],"synonyms":[{"name":"normal cell population growth in presence of cell wall-degrading enzymes","type":"exact"},{"name":"normal cell population growth on Lyticase","type":"narrow"},{"name":"normal cell population growth on Novozyme 234","type":"narrow"},{"name":"normal cell population growth on Zymolyase","type":"narrow"},{"name":"normal cell population growth on beta-1,3-glucan laminaripentaohydrolase","type":"narrow"},{"name":"normal cell population growth on cell wall-degrading enzymes","type":"exact"},{"name":"normal cell population growth on lysing enzymes from Trichoderma harzianum","type":"narrow"},{"name":"normal cellular response to cell wall-degrading enzymes","type":"related"},{"name":"normal vegetative cell population growth on cell wall-degrading enzymes","type":"exact"}],"termid":"FYPO:0001192"}


id: PBO:0004094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic RNA-binding protein 1","termid":"PBO:0004094"}


id: PBO:0080665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WAP four-disulfide core domain 10B","termid":"PBO:0080665"}


id: PBO:0062929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolyl 3-hydroxylase 2","termid":"PBO:0062929"}


id: MONDO:0007126
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any spondyloarthropathy, susceptibility to in which the cause of the disease is a mutation in the HLA-B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spondyloarthropathy, susceptibility to","termid":"MONDO:0024512"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spondyloarthropathy, susceptibility to, 1","secondary_identifiers":["UMLS:C1862852","MEDGEN:400145","DOID:0080603","OMIM:106300"],"synonyms":[{"name":"Bechterew syndrome","type":"related"},{"name":"HLA-B spondyloarthropathy, susceptibility to","type":"exact"},{"name":"Marie-Strumpell spondylitis","type":"related"},{"name":"SPDA1","type":"related"},{"name":"ankylosing spondylitis, susceptibility to","type":"related"},{"name":"spondyloarthropathy, susceptibility to caused by mutation in HLA-B","type":"exact"},{"name":"spondyloarthropathy, susceptibility to, 1","type":"exact"},{"name":"spondyloarthropathy, susceptibility to, type 1","type":"exact"},{"name":"susceptibility to spondyloarthropathy 1","type":"related"}],"termid":"MONDO:0007126","xrefs":{"Monarch":{"xref_id":"0007126"}}}


id: GO:0003100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which endothelin modulates the force with which blood passes through the circulatory system. Endothelin is a hormone that is released by the endothelium, and it is a vasoconstrictor.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure by hormone","termid":"GO:0001990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by endothelin","termid":"GO:0003100"}


id: PBO:0116305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translation termination factor eRF3; has a role in mRNA deadenylation and decay; altered protein conformation creates the [PSI(+)] prion, self-perpetuating amyloid fibrils that modify cellular fitness, alter translational fidelity by affecting reading frame selection, and result in a nonsense suppressor phenotype; forms reversible liquid condensates in response to both acidic and osmotic stress to promote survival; many stress-response genes are repressed in the presence of [PSI(+)]","termid":"PBO:0116305"}


id: PBO:0058849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8078","termid":"PBO:0058849"}


id: SO:0001609
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An elongation of a polypeptide sequence deriving from a sequence variant extending the CDS.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_sequence_variant","termid":"SO:0001603"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongated_polypeptide","synonyms":[{"name":"elongated polypeptide","type":"exact"}],"termid":"SO:0001609"}


id: GO:0034895
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: pryidine-3,4-diol + O2 = 3-(N-formyl)-formiminopyruvate.","definition_xrefs":["UM-BBD_reactionID:r1398"],"gene_count":0,"genotype_count":0,"name":"obsolete pyridine-3,4-diol dioxygenase activity (obsolete GO:0034895)","termid":"GO:0034895"}


id: GO:0005200
data:
  {"annotated_genes":["SJAG_01384","SJAG_03145","SJAG_02509","SJAG_04003","SJAG_04387"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58380,61589,64119,79539,110912],"is_not":false,"summary":null,"term":"GO:0005200"}]},"cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of a cytoskeletal structure.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01384":null,"SJAG_02509":null,"SJAG_03145":null,"SJAG_04003":null,"SJAG_04387":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005198"}],"interesting_parent_ids":["GO:0003674","GO:0005198"],"is_obsolete":false,"name":"structural constituent of cytoskeleton","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0005200","terms_by_termid":{"GO:0005200":null}}


id: GO:1905317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process by which an inferior endocardial cushion is generated and organized.","definition_xrefs":["PMID:17050629","GOC:rl","GO_REF:0000083","GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocardial cushion morphogenesis","termid":"GO:0003203"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inferior endocardial cushion morphogenesis","synonyms":[{"name":"ventral endocardial cushion morphogenesis","type":"exact"}],"termid":"GO:1905317"}


id: GO:0003137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell that contributes to heart induction.","definition_xrefs":["GOC:mtg_heart"],"gene_count":0,"genotype_count":0,"name":"obsolete Notch signaling pathway involved in heart induction (obsolete GO:0003137)","synonyms":[{"name":"Notch signalling pathway involved in heart induction","type":"exact"}],"termid":"GO:0003137"}


id: GO:0090372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of the directed movement of glycerol into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jh","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transmembrane transport","termid":"GO:0034764"},{"relation_name":"is_a","term_name":"regulation of glycerol transport","termid":"GO:0090371"},{"relation_name":"positively_regulates","term_name":"glycerol transmembrane transport","termid":"GO:0015793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"positive regulation of glycerol transport","termid":"GO:0090372"}


id: PATO:0001159
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concentration quality inhering in a bearer by virtue of the bearer's exhibiting concentration.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concentration of","termid":"PATO:0000033"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"concentrated","termid":"PATO:0001159"}


id: PBO:0080208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vestigial like family member 2","termid":"PBO:0080208"}


id: PBO:0030522
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_mitotic_spindle_assembly","termid":"PBO:0030522"}


id: MONDO:0009561
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alpha-mannosidosis is an inherited lysosomal storage disorder characterized by immune deficiency, facial and skeletal abnormalities, hearing impairment, and intellectual deficit.","definition_xrefs":["Orphanet:61"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"oligosaccharidosis","termid":"MONDO:0019251"},{"relation_name":"is_a","term_name":"lysosomal storage disease with skeletal involvement","termid":"MONDO:0800088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792","MONDO:0002561","MONDO:0005328"],"is_obsolete":false,"name":"alpha-mannosidosis","secondary_identifiers":["GARD:6968","icd11.foundation:1944256516","MESH:D008363","ICD9:271.8","OMIM:248500","MEDGEN:7467","SCTID:65524005","NORD:755","UMLS:C0024748","NCIT:C84548","NANDO:1200126","DOID:3413"],"synonyms":[{"name":"Alpha mannosidase B deficiency","type":"related"},{"name":"Alpha-D-mannosidosis","type":"exact"},{"name":"Alpha-mannosidase B deficiency","type":"related"},{"name":"MANSA","type":"related"},{"name":"alpha-mannosidase deficiency","type":"exact"},{"name":"alpha-mannosidosis","type":"exact"},{"name":"deficiency of alpha-mannosidase","type":"exact"},{"name":"lysosomal Alpha-D-mannosidase deficiency","type":"related"},{"name":"lysosomal alpha-D-mannosidase deficiency","type":"exact"},{"name":"mannosidosis, ALPHA B, lysosomal","type":"related"},{"name":"mannosidosis, alpha B lysosomal","type":"related"},{"name":"mannosidosis, alpha-, types I and II","type":"exact"}],"termid":"MONDO:0009561","xrefs":{"Monarch":{"xref_id":"0009561"}}}


id: PBO:0050980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraflagellar transport 27","termid":"PBO:0050980"}


id: PBO:0059604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 16","termid":"PBO:0059604"}


id: PBO:0047015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A18","termid":"PBO:0047015"}


id: PBO:0015689
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pre-mRna Processing","termid":"PBO:0015689"}


id: PBO:0004261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP citrate synthase subunit 1 (predicted)","termid":"PBO:0004261"}


id: PR:Q9P7N9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A trafficking protein particle complex subunit 5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR20902:SF0","OMA:SCHPO03727","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transport protein particle subunit trs31 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1718.05","secondary_identifiers":["UniProtKB:Q9P7N9"],"synonyms":[{"name":"Spom972h-TRAPPC5","type":"exact"},{"name":"TRAPP subunit trs31 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7N9"}


id: GO:0034303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which differentiated, resting cells are formed, usually within a fruiting body by Myxobacteria. The myxospore is more resistant to high temperature, desiccation, and UV than vegetative myxobacteria.","definition_xrefs":["ISBN:0122268008","GOC:ds"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myxospore formation","termid":"GO:0034303"}


id: GO:0021652
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to rhombomere 1. This process pertains to the initial formation of a structure from unspecified parts. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order.","definition_xrefs":["GO_REF:0000021","GOC:curators","GOC:dgh","GOC:dph","GOC:jid","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere formation","termid":"GO:0021594"},{"relation_name":"part_of","term_name":"rhombomere 1 morphogenesis","termid":"GO:0021651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 1 formation","termid":"GO:0021652"}


id: PBO:0116652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF like GTPase 2 binding protein pseudogene 7","termid":"PBO:0116652"}


id: PBO:0046803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coagulation factor VIII associated 1","termid":"PBO:0046803"}


id: MONDO:0015483
data:
  {"annotated_genes":["SJAG_01444","SJAG_00731","SJAG_03578"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88837],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013385"},{"annotations":[87463],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009558"},{"annotations":[87139],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030067"}]},"cv_name":"mondo","definition":"A hereditary disorder occurring in two forms: the complete form (Franceschetti's syndrome) is characterized by antimongoloid slant of the palpebral fissures, coloboma of the lower lid, micrognathia and hypoplasia of the zygomatic arches, and microtia. It is transmitted as an autosomal trait. The incomplete form (Treacher Collins syndrome) is characterized by the same anomalies in less pronounced degree. It occurs sporadically, but an autosomal dominant mode of transmission is suspected. (Dorland, 27th ed)","definition_xrefs":["MESH:D008342"],"direct_ancestors":[{"relation_name":"is_a","term_name":"otorhinolaryngologic disease","termid":"MONDO:0024623"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00731":null,"SJAG_01444":null,"SJAG_03578":null},"genotype_count":0,"is_obsolete":false,"name":"mandibulofacial dysostosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:155899","GARD:19980","icd11.foundation:470731247","MedDRA:10051456","ICD10CM:Q75.4"],"synonyms":[{"name":"bilateral and symmetric oto-mandibular dysplasia","type":"exact"}],"termid":"MONDO:0015483","terms_by_termid":{"MONDO:0009558":null,"MONDO:0013385":null,"MONDO:0030067":null},"xrefs":{"Monarch":{"xref_id":"0015483"}}}


id: GO:0047336
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2'-deoxy-5-methyl-5'-cytidylate + ATP = 5-methyldeoxycytidine diphosphate + ADP + H+.","definition_xrefs":["EC:2.7.4.19","RHEA:11396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, phosphate group as acceptor","termid":"GO:0016776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016301","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"5-methyldeoxycytidine-5'-phosphate kinase activity","secondary_identifiers":["KEGG_REACTION:R04235","MetaCyc:2.7.4.19-RXN"],"synonyms":[{"name":"ATP:5-methyldeoxycytidine-5'-phosphate phosphotransferase activity","type":"related"}],"termid":"GO:0047336"}


id: MONDO:0015051
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tubular duplication of the esophagous is a rare congenital malformation where a second structure with individual lumen and stratified squamous mucosa and muscularis mucosa lies within or adjacent to the true esophagus causing dysphagia, nausea, vomiting, retrosternal pain and respiratory problems (stridor and recurrent pneumonia) and usually presenting in children.","definition_xrefs":["Orphanet:100048"],"direct_ancestors":[{"relation_name":"is_a","term_name":"esophageal disorder","termid":"MONDO:0003749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"tubular duplication of the esophagus","secondary_identifiers":["MEDGEN:897945","GARD:19745","UMLS:C4274729"],"termid":"MONDO:0015051","xrefs":{"Monarch":{"xref_id":"0015051"}}}


id: PR:Q9P6L2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- set13 gene.","definition_xrefs":["UniProtKB:Q9P6L2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal lysine N-methyltransferase 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC688.14","synonyms":[{"name":"SET domain-containing protein 13 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-set13","type":"exact"}],"termid":"PR:Q9P6L2"}


id: PBO:0012035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER protein involved in ER-nucleus signaling (predicted)","termid":"PBO:0012035"}


id: GO:0097258
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 20-hydroxy-leukotriene B4 + O2 + reduced [NADPH-hemoprotein reductase] = 20-oxo-leukotriene B4 + H+ + 2 H2O + oxidized [NADPH-hemoprotein reductase].","definition_xrefs":["PMID:2836406","GOC:mw","RHEA:48668","PMID:9675028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"20-hydroxy-leukotriene B4 omega oxidase activity","secondary_identifiers":["Reactome:R-HSA-2161745"],"synonyms":[{"name":"20-hydroxy-leukotriene B4 omega-oxidase activity","type":"exact"},{"name":"20-hydroxy-leukotriene B4 omega-oxidation","type":"related"}],"termid":"GO:0097258"}


id: PBO:0089925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartyl metalloaminopeptidase Ape4","termid":"PBO:0089925"}


id: FYPO:0001508
data:
  {"alleles_by_uniquename":{"SJAG_01050:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01050","name":"nur1delta","uniquename":"SJAG_01050:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[121312],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001132"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin during vegetative growth","termid":"FYPO:0000452"},{"relation_name":"is_a","term_name":"abolished protein localization to chromatin","termid":"FYPO:0001678"},{"relation_name":"is_a","term_name":"abolished protein localization to chromosome during vegetative growth","termid":"FYPO:0002841"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01050":null,"SJAG_01745":null,"SJAG_03892":null},"genotype_count":1,"genotypes_by_uniquename":{"nur1delta__vps4delta":{"display_name":"nur1delta vps4delta","display_uniquename":"nur1delta__vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01050:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03892","SJAG_01050"],"name":"abolished protein localization to chromatin during vegetative growth","references_by_uniquename":{"PMID:32109380":null},"synonyms":[{"name":"abolished protein localisation to chromatin during vegetative growth","type":"exact"},{"name":"abolished protein localization to chromatin during mitotic cell cycle","type":"related"},{"name":"protein localization to chromatin during vegetative growth abolished","type":"exact"}],"termid":"FYPO:0001508","terms_by_termid":{"FYPO:0001132":null,"FYPO_EXT:0000001":null}}


id: PBO:0116757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMARCE1 pseudogene 3","termid":"PBO:0116757"}


id: MONDO:0024500
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neuroendocrine neoplasm that involves the duodenum.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small intestine neuroendocrine neoplasm","termid":"MONDO:0018510"},{"relation_name":"is_a","term_name":"tumor of duodenum","termid":"MONDO:0021375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"duodenal neuroendocrine neoplasm","secondary_identifiers":["MEDGEN:1800031","UMLS:C5568608"],"synonyms":[{"name":"duodenum NET","type":"exact"},{"name":"duodenum neuroendocrine neoplasm","type":"exact"},{"name":"duodenum neuroendocrine tumor","type":"exact"},{"name":"duodenum neuroendocrine tumor, well differentiated, low or intermediate grade","type":"exact"},{"name":"duodenum neuroendocrine tumour","type":"exact"},{"name":"neuroendocrine neoplasm of duodenum","type":"exact"}],"termid":"MONDO:0024500","xrefs":{"Monarch":{"xref_id":"0024500"}}}


id: PBO:0083848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Exosome non-catalytic core component; involved in 3'-5' RNA processing and degradation in both the nucleus and the cytoplasm; has similarity to E. coli RNase PH and to human hRrp42p (EXOSC7)","termid":"PBO:0083848"}


id: MOD:00494
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label","definition_xrefs":["PubMed:12185208","Unimod:123#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"N-iodoacetyl, p-chlorobenzyl-12C6-glucamine","synonyms":[{"name":"ICAT-H","type":"related"},{"name":"N-iodoacetyl, p-chlorobenzyl-12C6-glucamine","type":"related"}],"termid":"MOD:00494"}


id: PBO:0086502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative positive regulator of mannosylphosphate transferase Mnn6p; involved in mannosylphosphorylation of N-linked oligosaccharides; may also function as a mannosylphosphate transferase; expression increases in late-logarithmic and stationary growth phases; coding sequence contains length polymorphisms in different strains; MNN4 has a paralog, YJR061W, that arose from the whole genome duplication","termid":"PBO:0086502"}


id: PBO:0005136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DNAJ domain protein Mdj1 (predicted)","termid":"PBO:0005136"}


id: MONDO:0971172
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with hypotonia, brain anomalies, distinctive facies, and absent language","secondary_identifiers":["MEDGEN:1854654","UMLS:C5935628","Orphanet:686488","OMIM:620851"],"synonyms":[{"name":"NEDHAFA","type":"exact"},{"name":"RENU","type":"exact"},{"name":"RNU4-2-related neurodevelopmental disorder-facial dysmorphism-white matter abnormalities-short stature syndrome","type":"exact"},{"name":"RNU4-2-related neurodevelopmental syndrome","type":"exact"},{"name":"ReNU syndrome","type":"exact"}],"termid":"MONDO:0971172","xrefs":{"Monarch":{"xref_id":"0971172"}}}


id: GO:0098958
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of mitochondria along microtubules in axons towards the cell body and away from the presynapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retrograde axonal transport","termid":"GO:0008090"},{"relation_name":"is_a","term_name":"axonal transport of mitochondrion","termid":"GO:0019896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"retrograde axonal transport of mitochondrion","synonyms":[{"name":"retrograde axon transport of mitochondria","type":"exact"}],"termid":"GO:0098958"}


id: GO:1990016
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Elongated portion of a tanycyte that sticks into the periventricular layer of neuropil where it appears to contact a blood vessel; characterized by numerous cytoplasmic extensions. A tanycyte is a specialized elongated ventricular ependymal cell that has processes that extend to the outer, or pial, surface of the CNS.","definition_xrefs":["NIF_Subcellular:sao901230115","ISBN:0195065719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"neck portion of tanycyte","synonyms":[{"name":"neck portion","type":"broad"}],"termid":"GO:1990016"}


id: PBO:0083052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Diacylglycerol kinase; localized to the endoplasmic reticulum (ER); overproduction induces enlargement of ER-like membrane structures and suppresses a temperature-sensitive sly1 mutation; contains a CTP transferase domain","termid":"PBO:0083052"}


id: PBO:0087803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tail-anchored plasma membrane protein with a conserved CYSTM module; predicted to be palmitoylated; has similarity to hydrophilins, which are involved in the adaptive response to hyperosmotic conditions; YBR016W has a paralog, YDL012C, that arose from the whole genome duplication","termid":"PBO:0087803"}


id: GO:1903611
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of calcium-dependent ATPase activity.","definition_xrefs":["GO_REF:0000059","PMID:10861851","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of ATP-dependent activity","termid":"GO:0032780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of calcium-dependent ATPase activity","synonyms":[{"name":"down regulation of calcium-dependent ATPase activity","type":"exact"},{"name":"down-regulation of calcium-dependent ATPase activity","type":"exact"},{"name":"downregulation of calcium-dependent ATPase activity","type":"exact"},{"name":"inhibition of calcium-dependent ATPase activity","type":"narrow"}],"termid":"GO:1903611"}


id: PBO:0073032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scratch family transcriptional repressor 2","termid":"PBO:0073032"}


id: PBO:0081072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger DHHC-type containing 4 pseudogene 1","termid":"PBO:0081072"}


id: PBO:0057450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 570","termid":"PBO:0057450"}


id: GO:0046660
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment of the sex of a female organism by physical differentiation.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sex differentiation","termid":"GO:0007548"},{"relation_name":"part_of","term_name":"multicellular organism development","termid":"GO:0007275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"female sex differentiation","termid":"GO:0046660"}


id: PBO:0036182
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_dimethylation_at_centromere_inner_repeat_during_vegetative_growth","termid":"PBO:0036182"}


id: FYPO:0004999
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of horsetail movement is normal (i.e. indistinguishable from wild type). Horsetail movement is the oscillatory movement of the nucleus that takes place during meiotic prophase I.","definition_xrefs":["PomBase:mah","GO:0030989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal horsetail movement","termid":"FYPO:0003835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal duration of horsetail movement","synonyms":[{"name":"normal duration of dynein-driven meiotic oscillatory nuclear movement","type":"exact"},{"name":"normal duration of horsetail nuclear movement","type":"exact"}],"termid":"FYPO:0004999"}


id: PBO:0068391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 212","termid":"PBO:0068391"}


id: GO:0141154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts the host shutoff of host translation, a host response that prevents mRNA in the cell to be translated, to prevent the symbiont from expressing its genes. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:21622569","PMID:20563710"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host defenses","termid":"GO:0044414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host-directed shutoff of host translation","termid":"GO:0141154"}


id: PBO:0040433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase phospholipid transporting 8A1","termid":"PBO:0040433"}


id: GO:0032194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of ubiquinone, via the intermediates 3,4-dihydroxy-5-polyprenylbenzoate and 3-methoxy-4-hydroxy-5-polyprenylbenzoate.","definition_xrefs":["PMID:11583838","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate (obsolete GO:0032194)","termid":"GO:0032194"}


id: PBO:0060714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A5 pseudogene 11","termid":"PBO:0060714"}


id: MONDO:0001976
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare movement disorder developed during pregnancy, characterized by involuntary jerky motion (chorea) and inability to maintain stable position of body parts (athetosis). rheumatic fever and collagen vascular disorders are frequently associated with this disease. Chorea may vary from mild to severe and occurs in approximately 1 per 2,000 to 3,000 pregnancies. (From Md Med J 1997 Sep;46(8):436-9)","definition_xrefs":["MESH:D020150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choreatic disease","termid":"MONDO:0001595"},{"relation_name":"is_a","term_name":"pregnancy disorder","termid":"MONDO:0024575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chorea gravidarum","secondary_identifiers":["ICD9:646.80","DOID:14483","UMLS:C0264746","icd11.foundation:113562578","SCTID:25113000","MEDGEN:75545"],"termid":"MONDO:0001976","xrefs":{"Monarch":{"xref_id":"0001976"}}}


id: PR:O13883
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phosphatidylinositol glycan anchor biosynthesis class U protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02066","PANTHER:PTHR13121:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI transamidase component GAB1 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1952.01","secondary_identifiers":["UniProtKB:O13883"],"synonyms":[{"name":"Spom972h-PIGU","type":"exact"}],"termid":"PR:O13883"}


id: MONDO:0016549
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital primary megaureter","termid":"MONDO:0018960"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"primary megaureter, adult-onset form","secondary_identifiers":["GARD:20639","MEDGEN:1842492","UMLS:C5680937","Orphanet:238642"],"termid":"MONDO:0016549","xrefs":{"Monarch":{"xref_id":"0016549"}}}


id: GO:0052136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a lower concentration of a specific chemical on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative chemotaxis on or near host (obsolete GO:0052136)","termid":"GO:0052136"}


id: GO:0051597
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a methylmercury stimulus.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to methylmercury","synonyms":[{"name":"response to CH3-Hg+","type":"exact"},{"name":"response to MeHg+","type":"exact"}],"termid":"GO:0051597"}


id: PR:Q9UUL4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mok12 gene.","definition_xrefs":["UniProtKB:Q9UUL4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall alpha-1,3-glucan synthase mok12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32H8.13c","synonyms":[{"name":"Spom972h-mok12","type":"exact"}],"termid":"PR:Q9UUL4"}


id: FYPO:0005738
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which phosphorylation of serine at position 10 of histone H3 not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein modification during vegetative growth","termid":"FYPO:0000544"},{"relation_name":"is_a","term_name":"abnormal histone H2A phosphorylation during vegetative growth","termid":"FYPO:0002599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0002274","FYPO:0001320","FYPO:0000002","FYPO:0002494"],"is_obsolete":false,"name":"abolished histone H3-S10 phosphorylation during vegetative growth","synonyms":[{"name":"abolished histone H3 phosphorylation at S10 during vegetative growth","type":"exact"},{"name":"abolished histone H3-S10 phosphorylation during mitotic cell cycle","type":"related"},{"name":"abolished histone H3S10 phosphorylation during vegetative growth","type":"exact"},{"name":"histone H3-S10 phosphorylation abolished during vegetative growth","type":"exact"},{"name":"histone H3-S10 phosphorylation absent during vegetative growth","type":"exact"}],"termid":"FYPO:0005738"}


id: GO:0044114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of an organism from an initial condition to a later condition, occurring within the cells or tissues of the host organism. This may (but not necessarily) include a filamentous growth form, and also can include secretion of proteases and lipases to break down host tissue. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:jl","GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of structure involved in a symbiotic process","termid":"GO:0044111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"development of symbiont in host","secondary_identifiers":["GO:0044122","GO:0044124"],"synonyms":[{"name":"development of symbiont in host intercellular space","type":"narrow"},{"name":"development of symbiont in host vascular tissue","type":"narrow"}],"termid":"GO:0044114"}


id: MONDO:1011811
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cancer or benign tumor, non-human animal","termid":"MONDO:1011305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital melanoma, non-human animal","secondary_identifiers":["OMIA:000634"],"termid":"MONDO:1011811","xrefs":{"Monarch":{"xref_id":"1011811"}}}


id: GO:0032125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the micronucleus.","definition_xrefs":["PMID:10503190","GOC:dph","GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus organization","termid":"GO:0006997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"micronucleus organization","synonyms":[{"name":"micronuclear organization","type":"exact"},{"name":"micronuclear organization and biogenesis","type":"related"},{"name":"micronucleus organisation","type":"exact"}],"termid":"GO:0032125"}


id: GO:0097147
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex consisting of NOXA and BCL-2, members of the Bcl-2 family of anti- and proapoptotic regulators.","definition_xrefs":["GOC:so","PMID:14634621"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bcl-2 family protein complex","termid":"GO:0097136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"NOXA-BCL-2 complex","termid":"GO:0097147"}


id: PBO:0045020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"divergent protein kinase domain 2B","termid":"PBO:0045020"}


id: PBO:0113159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Homolog of nuclear distribution factor NudE; NUDEL; interacts with Pac1p and regulates dynein targeting to microtubule plus ends; localizes to cytosol, nucleus and peroxisomes","termid":"PBO:0113159"}


id: PBO:0062398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 21 pseudogene","termid":"PBO:0062398"}


id: MONDO:0004584
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"opportunistic mycosis","termid":"MONDO:0002312"},{"relation_name":"is_a","term_name":"fungal lung infectious disease","termid":"MONDO:0005766"},{"relation_name":"is_a","term_name":"hypersensitivity pneumonitis","termid":"MONDO:0017853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"maple bark strippers' lung","secondary_identifiers":["UMLS:C0155890","ICD10CM:J67.6","ICD9:495.6","MEDGEN:510126","DOID:8484","SCTID:86638007"],"synonyms":[{"name":"alveolitis due to cryptostroma corticale","type":"exact"},{"name":"maple bark disease","type":"exact"},{"name":"maple bark stripper's disease","type":"exact"},{"name":"maple bark stripper's lung","type":"exact"},{"name":"maple bark-strippers' lung","type":"exact"},{"name":"maple-bark strippers' lung","type":"exact"}],"termid":"MONDO:0004584","xrefs":{"Monarch":{"xref_id":"0004584"}}}


id: FYPO:0002645
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of threonine residues in one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased protein threonine phosphorylation during vegetative growth (obsolete FYPO:0002645)","synonyms":[{"name":"decreased peptidyl-threonine phosphorylation during vegetative growth","type":"exact"},{"name":"decreased protein threonine phosphorylation during mitotic cell cycle","type":"related"},{"name":"decreased threonine phosphorylation during vegetative growth","type":"exact"},{"name":"reduced protein threonine phosphorylation during vegetative growth","type":"exact"}],"termid":"FYPO:0002645"}


id: GO:0120032
data:
  {"annotated_genes":["SJAG_00514","SJAG_02379","SJAG_03453","SJAG_01794","SJAG_04509"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113220,91685,92659,89709,95289],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902917"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of plasma membrane bounded cell projection assembly.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell projection assembly","termid":"GO:0060491"},{"relation_name":"is_a","term_name":"regulation of plasma membrane bounded cell projection organization","termid":"GO:0120035"},{"relation_name":"regulates","term_name":"plasma membrane bounded cell projection assembly","termid":"GO:0120031"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01794":null,"SJAG_02379":null,"SJAG_03453":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of plasma membrane bounded cell projection assembly","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0120032","terms_by_termid":{"GO:1902917":null}}


id: GO:0009830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular process that results in the breakdown of the cell wall that contributes to the process of abscission.","definition_xrefs":["GOC:dph","GOC:lr","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant-type cell wall modification","termid":"GO:0009827"},{"relation_name":"is_a","term_name":"cell wall disassembly","termid":"GO:0044277"},{"relation_name":"part_of","term_name":"abscission","termid":"GO:0009838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0008150","GO:0071554"],"is_obsolete":false,"name":"cell wall modification involved in abscission","synonyms":[{"name":"cell wall modification during abscission","type":"related"}],"termid":"GO:0009830"}


id: PBO:0059690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 56","termid":"PBO:0059690"}


id: FYPO:0007053
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to zinc ion starvation is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0006551","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein level during cellular response to zinc ion starvation","synonyms":[{"name":"decreased protein accumulation during cellular response to zinc ion starvation","type":"related"},{"name":"decreased protein level during cellular response to zinc ion depletion","type":"exact"},{"name":"decreased protein level during cellular response to zinc ion deprivation","type":"exact"},{"name":"decreased protein level during cellular response to zinc ion limitation","type":"exact"},{"name":"decreased protein level during cellular response to zinc ion starvation during mitotic cell cycle","type":"related"},{"name":"decreased protein level during cellular response to zinc ion starvation during vegetative growth","type":"exact"},{"name":"decreased protein level during cellular response to zinc starvation","type":"exact"},{"name":"reduced protein level during cellular response to zinc ion starvation","type":"exact"}],"termid":"FYPO:0007053"}


id: MONDO:0008939
data:
  {"annotated_genes":["SJAG_02470"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89017],"is_not":false,"summary":null,"term":"MONDO:0008939"}]},"cv_name":"mondo","definition":"Hypoplasia of the cerebellum that is associated with inherited metabolic disorders and neurodegenerative disorders. Signs and symptoms include mental and developmental delays, walking and balance difficulties, floppy muscle tone, and seizures.","definition_xrefs":["NCIT:C98890"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02470":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"isolated cerebellar hypoplasia/agenesis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18720","UMLS:C5231391","DOID:0070338","NORD:910","OMIM:213000","MEDGEN:1695950","MESH:C562568","Orphanet:1398","MedDRA:10008033","SCTID:16026008"],"synonyms":[{"name":"Cerebellar Agenesis","type":"exact"},{"name":"Chiari 4 malformation","type":"exact"},{"name":"Chiari IV malformation","type":"exact"},{"name":"cerebellar hypoplasia","type":"related"},{"name":"cerebellar hypoplasia/atrophy, epilepsy, and global developmental delay","type":"exact"},{"name":"congenital cerebellar Hypoplasia","type":"exact"},{"name":"isolated cerebellar agenesis","type":"related"},{"name":"near total absence of cerebellum","type":"exact"},{"name":"subtotal absence of cerebellum","type":"exact"}],"termid":"MONDO:0008939","terms_by_termid":{"MONDO:0008939":null},"xrefs":{"Monarch":{"xref_id":"0008939"}}}


id: PBO:0030536
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_processing","termid":"PBO:0030536"}


id: GO:0031225
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of a membrane consisting of the gene products that are tethered to the membrane only by a covalently attached anchor, such as a lipid group that is embedded in the membrane. Gene products with peptide sequences that are embedded in the membrane are excluded from this grouping.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete anchored component of membrane (obsolete GO:0031225)","synonyms":[{"name":"anchored to membrane","type":"exact"}],"termid":"GO:0031225"}


id: MONDO:0975756
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"benign vascular tumor","termid":"MONDO:0971115"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reactive angioendotheliomatosis","secondary_identifiers":["Orphanet:673574","UMLS:C2930870","MEDGEN:418935"],"termid":"MONDO:0975756","xrefs":{"Monarch":{"xref_id":"0975756"}}}


id: PBO:0059884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 7","termid":"PBO:0059884"}


id: MONDO:0002726
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A variant of cutaneous mastocytosis which occurs as a single lesion usually in infants. It is found mostly in the wrist and trunk and there is no atypical cytomorphology.","definition_xrefs":["MESH:D054705"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skin cancer","termid":"MONDO:0002898"},{"relation_name":"is_a","term_name":"mast cell neoplasm","termid":"MONDO:0002724"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"cutaneous solitary mastocytoma","secondary_identifiers":["ICDO:9740/1","DOID:3666","NCIT:C7138"],"synonyms":[{"name":"skin solitary mastocytoma","type":"exact"},{"name":"solitary mastocytoma of skin","type":"exact"},{"name":"solitary mastocytoma of the skin","type":"exact"}],"termid":"MONDO:0002726","xrefs":{"Monarch":{"xref_id":"0002726"}}}


id: PBO:0086711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; mutant exhibits mitophagy defects; in closely related species and other S. cerevisiae strain backgrounds YIL165C and adjacent ORF, YIL164C, likely constitute a single ORF encoding a nitrilase gene","termid":"PBO:0086711"}


id: MONDO:0028569
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic interstitial lung disease (obsolete MONDO:0028569)","secondary_identifiers":["Orphanet:264992"],"termid":"MONDO:0028569","xrefs":{"Monarch":{"xref_id":"0028569"}}}


id: PBO:0084930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA-binding protein of the PUF family; binds to specific mRNAs, often in the 3' UTR; has broad specificity and binds to more than 1000 mRNAs (16% of the transcriptome); recruits the CCR4-NOT deadenylase complex to mRNAs along with Dhh1p and Dcp1p to promote deadenylation, decapping, and decay; also interacts with the Caf20p translational initiation repressor, affecting its mRNA target specificity","termid":"PBO:0084930"}


id: GO:0002794
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of antimicrobial peptide secretion.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antimicrobial peptide production","termid":"GO:0002784"},{"relation_name":"is_a","term_name":"regulation of peptide secretion","termid":"GO:0002791"},{"relation_name":"regulates","term_name":"antimicrobial peptide secretion","termid":"GO:0002776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of antimicrobial peptide secretion","termid":"GO:0002794"}


id: FYPO:0003954
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which triglyceride biosynthesis is decreased.","definition_xrefs":["GO:0019493","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolism phenotype during vegetative growth","termid":"FYPO:0001348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased triglyceride biosynthetic process","synonyms":[{"name":"decreased TAG biosynthetic process","type":"exact"},{"name":"decreased triacylglycerol biosynthesis","type":"exact"},{"name":"decreased triacylglycerol biosynthetic process","type":"exact"},{"name":"decreased triglyceride biosynthesis","type":"exact"},{"name":"decreased triglyceride biosynthetic process during mitotic cell cycle","type":"related"},{"name":"decreased triglyceride biosynthetic process during vegetative growth","type":"exact"},{"name":"reduced triglyceride biosynthetic process","type":"exact"}],"termid":"FYPO:0003954"}


id: PBO:0028989
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_small_RNA_level_(obsolete_FYPO:0003261)","termid":"PBO:0028989"}


id: PBO:0060271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin heavy chain 6","termid":"PBO:0060271"}


id: FYPO:0005175
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of catalase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal catalase activity","termid":"FYPO:0001104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000654","FYPO:0000661","FYPO:0000002","FYPO:0000707","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"increased catalase activity","termid":"FYPO:0005175"}


id: GO:0031155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of reproductive fruiting body development.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of spore-bearing organ development","termid":"GO:0075260"},{"relation_name":"regulates","term_name":"reproductive fruiting body development","termid":"GO:0030582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of reproductive fruiting body development","synonyms":[{"name":"regulation of fruiting body formation","type":"exact"}],"termid":"GO:0031155"}


id: FYPO:0008152
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of transcribed  cryptic unstable trancripts (CUTs) measured in a cell is  normal  (i.e. indistinguishable from wild type).  Total CUT RNA or a CUT transcribed from a specific locus may be affected.","direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal CUT RNA level","termid":"FYPO:0008152"}


id: MONDO:0100108
data:
  {"annotated_genes":["SJAG_04887"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87120],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0800341"},{"annotations":[86944],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012239"}]},"cv_name":"mondo","definition":"TPM3-related myopathy is a disorder of the musculoskeletal system that covers a wide spectrum of phenotypes and is caused by pathogenic variants in the skeletal muscle γ-Tropomyosin gene. These variants lead to a variety of overlapping adult onset and congenital myopathies characterized by muscle weakness, hypotonia, motor delay, myopathic facies, scoliosis, and sometimes respiratory involvement. Histologic findings on skeletal muscle biopsy are variable with nemaline and intranuclear bodies, cap-like lesions, fiber-type disproportion, and dystrophic features even in patients with the same mutation.","definition_xrefs":["PMID:24692096"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of tropomyosin","termid":"MONDO:0017303"},{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"TPM3-related myopathy","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"TPM3 myopathy","type":"exact"},{"name":"TPM3-related myopathy","type":"exact"},{"name":"autosomal dominant TPM3-related myopathy","type":"narrow"},{"name":"congenital myopathy related to TPM3","type":"exact"}],"termid":"MONDO:0100108","terms_by_termid":{"MONDO:0012239":null,"MONDO:0800341":null},"xrefs":{"Monarch":{"xref_id":"0100108"}}}


id: PBO:0052184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium two pore domain channel subfamily K member 16","termid":"PBO:0052184"}


id: FYPO:0005065
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 at the mating type locus occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 methylation during vegetative growth","termid":"FYPO:0000871"},{"relation_name":"is_a","term_name":"abnormal histone methylation at silent mating-type cassette during vegetative growth","termid":"FYPO:0007373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002274","FYPO:0002494","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased histone H3-K9 methylation at mating type locus during vegetative growth","synonyms":[{"name":"increased histone H3 K9 methylation at mating type locus during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 methylation at mating type locus during mitotic cell cycle","type":"related"},{"name":"increased histone H3K9 methylation at mating type locus during vegetative growth","type":"exact"},{"name":"increased histone H3K9me at mating type locus during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 methylation at mating type locus during vegetative growth","type":"exact"}],"termid":"FYPO:0005065"}


id: PR:Q02953
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hsf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q02953"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock factor protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2E12.02","synonyms":[{"name":"HSF (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"HSTF (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-hsf1","type":"exact"},{"name":"heat shock transcription factor (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q02953"}


id: MONDO:0001558
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, lethal congenital malformation characterized by bilateral renal agenesis and the absence or decreased volume of amniotic fluid (oligohydramnios). The presence of oligohydramnios gives rise to congenital anomalies that include hypoplastic lungs, lower extremities abnormalities, and characteristic facial features (low-set ears, widely separated eyes, nose flattening, and receding chin). Newborn infants usually die of respiratory failure.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"oligohydramnios","termid":"MONDO:0005881"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Potter sequence","secondary_identifiers":["NANDO:2200157","DOID:12594","MEDGEN:472617","ICD10CM:Q60.6","NCIT:C40435","SCTID:41962002","UMLS:C0178426"],"synonyms":[{"name":"Potter syndrome","type":"exact"},{"name":"Potter's sequence","type":"exact"},{"name":"Potter's syndrome","type":"exact"},{"name":"oligohydramnios sequence","type":"exact"}],"termid":"MONDO:0001558","xrefs":{"Monarch":{"xref_id":"0001558"}}}


id: FYPO:0006498
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal during a cellular response to ultraviolet light.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during vegetative growth","termid":"FYPO:0001038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002494","FYPO:0002274","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased protein phosphorylation during cellular response to UV","synonyms":[{"name":"increased protein phosphorylation during cellular response to UV during mitotic cell cycle","type":"related"},{"name":"increased protein phosphorylation during cellular response to UV during vegetative growth","type":"exact"},{"name":"increased protein phosphorylation during cellular response to ultraviolet light","type":"exact"}],"termid":"FYPO:0006498"}


id: PBO:0074873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 56","termid":"PBO:0074873"}


id: MONDO:0011996
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic myeloproliferative neoplasm characterized by the expression of the BCR-ABL1 fusion gene. It presents with neutrophilic leukocytosis. It can appear at any age, but it mostly affects middle aged and older individuals. Patients usually present with fatigue, weight loss, anemia, night sweats, and splenomegaly. If untreated, it follows a biphasic or triphasic natural course; an initial indolent chronic phase which is followed by an accelerated phase, a blast phase, or both. Allogeneic stem cell transplantation and tyrosine kinase inhibitors delay disease progression and prolong overall survival.","definition_xrefs":["NCIT:C3174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid leukemia","termid":"MONDO:0004643"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"chronic myelogenous leukemia, BCR-ABL1 positive","secondary_identifiers":["ICD9:205.1","GARD:6105","ICDO:9863/3","NANDO:2200013","MedDRA:10009013","EFO:0000339","Orphanet:521","ICDO:9875/3","UMLS:C0279543","DOID:0081088","MEDGEN:75993","NCIT:C3177","OMIM:608232","DOID:8552","ONCOTREE:CML"],"synonyms":[{"name":"BCR-ABL Positive chronic myelogenous leukaemia","type":"exact"},{"name":"BCR-ABL Positive chronic myelogenous leukemia","type":"exact"},{"name":"CML","type":"exact"},{"name":"CML - chronic myelogenous leukaemia","type":"exact"},{"name":"CML - chronic myelogenous leukemia","type":"exact"},{"name":"chronic granulocytic leukaemia","type":"exact"},{"name":"chronic granulocytic leukemia","type":"exact"},{"name":"chronic myelocytic leukaemia","type":"exact"},{"name":"chronic myelocytic leukemia","type":"exact"},{"name":"chronic myelogenous leukaemia","type":"exact"},{"name":"chronic myelogenous leukaemia (CML)","type":"exact"},{"name":"chronic myelogenous leukemia","type":"exact"},{"name":"chronic myelogenous leukemia (CML)","type":"exact"},{"name":"chronic myelogenous leukemia, BCR-ABL1 Positive","type":"exact"},{"name":"chronic myelogenous leukemias","type":"exact"},{"name":"chronic myeloid leukaemia","type":"exact"},{"name":"chronic myeloid leukemia","type":"exact"},{"name":"hematopoeitic - chronic myelocytic leukaemia (CML)","type":"exact"},{"name":"hematopoeitic - chronic myelocytic leukemia (CML)","type":"exact"},{"name":"leukemia, Philadelphia chromosome-positive, resistant to imatinib, Somatic mutation","type":"exact"},{"name":"leukemia, chronic myelogenous","type":"related"},{"name":"leukemia, chronic myeloid","type":"related"},{"name":"leukemia, chronic myeloid, Philadelphia chromosome positive, somatic","type":"exact"},{"name":"leukemia, chronic myeloid, atypical","type":"related"},{"name":"myeloid leukemia, chronic","type":"exact"}],"termid":"MONDO:0011996","xrefs":{"Monarch":{"xref_id":"0011996"}}}


id: GO:0098808
data:
  {"annotated_genes":["SJAG_05010"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93374],"is_not":false,"summary":null,"term":"GO:0098808"}]},"cv_name":"molecular_function","definition":"Binding to a 7-methylguanosine (m7G) group or derivative located at the 5' end of an mRNA molecule.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA cap binding","termid":"GO:0000339"},{"relation_name":"is_a","term_name":"mRNA binding","termid":"GO:0003729"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05010":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003723","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"mRNA cap binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0098808","terms_by_termid":{"GO:0098808":null}}


id: PBO:0042668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEA cell adhesion molecule pseudogene 2","termid":"PBO:0042668"}


id: MONDO:1012159
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Megaesophagus that occurs in goat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"megaesophagus, non-human animal","termid":"MONDO:1011660"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"megaesophagus, goat","secondary_identifiers":["OMIA:000631-9925"],"termid":"MONDO:1012159","xrefs":{"Monarch":{"xref_id":"1012159"}}}


id: PBO:0046981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 86 member E, pseudogene","termid":"PBO:0046981"}


id: MONDO:0010287
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hereditary spastic paraplegia that has material basis in variation in the chromosome region Xq11.2.","definition_xrefs":["PMID:9254866","DOID:0110769"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 16","secondary_identifiers":["GARD:9585","OMIM:300266","Orphanet:100997","UMLS:C1846046","MESH:C536643","MEDGEN:375796"],"synonyms":[{"name":"SPG16","type":"exact"},{"name":"X-linked spastic paraplegia 16","type":"exact"},{"name":"X-linked spastic paraplegia type 16","type":"exact"},{"name":"hereditary spastic paraplegia type 16","type":"exact"},{"name":"spastic paraplegia 16","type":"related"},{"name":"spastic paraplegia 16, X-linked","type":"related"},{"name":"spastic paraplegia 16, X-linked, complicated, X-linked recessive","type":"exact"}],"termid":"MONDO:0010287","xrefs":{"Monarch":{"xref_id":"0010287"}}}


id: GO:0008493
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of tetracycline from one side of a membrane to the other. Tetracycline is a broad spectrum antibiotic that blocks binding of aminoacyl tRNA to the ribosomes of both Gram-positive and Gram-negative organisms (and those of organelles).","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"alcohol transmembrane transporter activity","termid":"GO:0015665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"tetracycline transmembrane transporter activity","synonyms":[{"name":"tetracyclin transporter activity","type":"exact"},{"name":"tetracycline transporter activity","type":"related"}],"termid":"GO:0008493"}


id: MONDO:0000857
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A Charcot-Marie-Tooth disease that is characterized by optic atrophy followed by retinitis pigmentosa.","definition_xrefs":["DOID:0080069","PMID:25491489"],"gene_count":0,"genotype_count":0,"name":"obsolete Charcot-Marie-Tooth disease type 7 (obsolete MONDO:0000857)","termid":"MONDO:0000857","xrefs":{"Monarch":{"xref_id":"0000857"}}}


id: GO:0046529
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining of the parts of the wing imaginal discs, giving rise to the adult thorax.","direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"imaginal disc fusion","termid":"GO:0046528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc fusion, thorax closure","termid":"GO:0046529"}


id: GO:0036269
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The response to external or internal stimuli that results in the locomotory process of swimming. Swimming is the self-propelled movement of an organism through the water.","definition_xrefs":["GOC:cvs","PMID:16764679"],"direct_ancestors":[{"relation_name":"is_a","term_name":"locomotory behavior","termid":"GO:0007626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"swimming behavior","synonyms":[{"name":"swimming behaviour","type":"exact"}],"termid":"GO:0036269"}


id: MONDO:0003566
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete choroid plexus carcinoma (obsolete MONDO:0003566)","termid":"MONDO:0003566","xrefs":{"Monarch":{"xref_id":"0003566"}}}


id: FYPO:0002650
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the kinetochore is divided into two or more parts.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal kinetochore morphology during vegetative growth","termid":"FYPO:0000050"},{"relation_name":"is_a","term_name":"split kinetochore","termid":"FYPO:0005647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000641","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"split kinetochore during vegetative growth","synonyms":[{"name":"split kinetochore during mitotic cell cycle","type":"related"},{"name":"split kinetochores during vegetative growth","type":"exact"}],"termid":"FYPO:0002650"}


id: PBO:0064342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plexin domain containing 2","termid":"PBO:0064342"}


id: PBO:0063964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PIP5K1A and PSMD4 like (pseudogene)","termid":"PBO:0063964"}


id: GO:0030811
data:
  {"annotated_genes":["SJAG_00685","SJAG_05314","SJAG_02785"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74826,77883],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045820"},{"annotations":[71755],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006110"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of nucleotides.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleotide metabolic process","termid":"GO:0006140"},{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"regulates","term_name":"nucleotide catabolic process","termid":"GO:0009166"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00685":null,"SJAG_02785":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of nucleotide catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"regulation of nucleotide breakdown","type":"exact"},{"name":"regulation of nucleotide catabolism","type":"exact"},{"name":"regulation of nucleotide degradation","type":"exact"}],"termid":"GO:0030811","terms_by_termid":{"GO:0006110":null,"GO:0045820":null}}


id: PBO:0070599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 66","termid":"PBO:0070599"}


id: PBO:0072330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 16","termid":"PBO:0072330"}


id: PBO:0055440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2871","termid":"PBO:0055440"}


id: PBO:0088027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2-snRNP associated splicing factor; similar to the mammalian splicing factor SAP49; proposed to function as a U2-snRNP assembly factor along with Hsh155p and binding partner Cus1p; contains two RNA recognition motifs (RRM)","termid":"PBO:0088027"}


id: GO:0050043
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-lactate = (R)-lactate.","definition_xrefs":["EC:5.1.2.1","RHEA:10960"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on hydroxy acids and derivatives","termid":"GO:0016856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"lactate racemase activity","secondary_identifiers":["MetaCyc:LACTATE-RACEMASE-RXN","KEGG_REACTION:R01450"],"synonyms":[{"name":"hydroxyacid racemase activity","type":"related"},{"name":"lactic acid racemase activity","type":"related"},{"name":"lacticoracemase activity","type":"related"}],"termid":"GO:0050043"}


id: FYPO:0007076
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the substrate specificity of a gene product that executes histone H3-K9 specific methyltransferase activity is altered. For example, preference for modified (e.g. ubiquitinated) H3 molecules may be enhanced or diminished.","definition_xrefs":["PMID:31468675","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered substrate specificity","termid":"FYPO:0003347"},{"relation_name":"is_a","term_name":"abnormal histone acetyltransferase activity","termid":"FYPO:0006453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0005447","FYPO:0001985","FYPO:0000661","FYPO:0000652","FYPO:0000641","FYPO:0000002","FYPO:0000654"],"is_obsolete":false,"name":"altered histone H3-K9 methyltransferase substrate specificity","synonyms":[{"name":"altered histone methyltransferase activity (H3-K9 specific) substrate specificity","type":"exact"}],"termid":"FYPO:0007076"}


id: GO:0018701
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: organohalide + 2 H+ + 2 e- = R-H + HCl. Reactants include chlorohydroquinone (forms hydroquinone) and 2,5-dichlorohydroquinone (forms chlorohydroquinone).","definition_xrefs":["UM-BBD_enzymeID:e0366"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,5-dichlorohydroquinone reductive dehalogenase activity (obsolete GO:0018701)","termid":"GO:0018701"}


id: PBO:0042171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cellular communication network factor 2","termid":"PBO:0042171"}


id: PBO:0036157
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_cytoskeleton_during_meiosis","termid":"PBO:0036157"}


id: PBO:0082599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clathrin coat accessory factor; involved in clathrin-mediated vesicle trafficking; may function to link the AP-1 clathrin adaptor complex with the Rab GTPase Ypt31p; has structural similarity to G-proteins; mouse homolog Aagab (p34) functionally complements irc6 null mutation; null mutant displays increased levels of spontaneous Rad52p foci","termid":"PBO:0082599"}


id: PBO:0080024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 10","termid":"PBO:0080024"}


id: MONDO:0037937
data:
  {"annotated_genes":["SJAG_00885","SJAG_02658","SJAG_00964","SJAG_03164","SJAG_00694"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86898],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014647"},{"annotations":[87143],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011283"},{"annotations":[88864],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013350"},{"annotations":[88109],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012792"},{"annotations":[87022,87023],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009797"}]},"cv_name":"mondo","definition":"A disease that has its basis in the disruption of pyrimidine nucleobase metabolic process.","definition_xrefs":["MONDO:patterns/basis_in_disruption_of_process"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease","termid":"MONDO:0005066"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00694":null,"SJAG_00885":null,"SJAG_00964":null,"SJAG_02658":null,"SJAG_03164":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"pyrimidine metabolism disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:85444005"],"synonyms":[{"name":"disorder of pyrimidine metabolism","type":"exact"},{"name":"disorder of pyrimidine nucleobase metabolic process","type":"exact"},{"name":"pyrimidine nucleobase metabolic process disease","type":"exact"}],"termid":"MONDO:0037937","terms_by_termid":{"MONDO:0009797":null,"MONDO:0011283":null,"MONDO:0012792":null,"MONDO:0013350":null,"MONDO:0014647":null},"xrefs":{"Monarch":{"xref_id":"0037937"}}}


id: PBO:0003984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Prp43 (predicted)","termid":"PBO:0003984"}


id: GO:0099506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of synaptic vesicles along actin filaments within a cell, powered by molecular motors.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle transport along actin filament","termid":"GO:0030050"},{"relation_name":"is_a","term_name":"synaptic vesicle cytoskeletal transport","termid":"GO:0099514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"synaptic vesicle transport along actin filament","termid":"GO:0099506"}


id: PBO:0077629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane O-mannosyltransferase targeting cadherins 1","termid":"PBO:0077629"}


id: PBO:0081488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 384","termid":"PBO:0081488"}


id: PBO:0052997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laminin subunit beta 2","termid":"PBO:0052997"}


id: PBO:0000283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein Pfs2","termid":"PBO:0000283"}


id: MONDO:1010120
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sudden death in children < 19 years of age that remains unexplained after a thorough case investigation, including performance of a complete autopsy with ancillary testing, and review of the clinical history and circumstances of death.","definition_xrefs":["PMID:28679642"],"direct_ancestors":[{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sudden unexpected death in pediatrics","synonyms":[{"name":"SUDP","type":"exact"}],"termid":"MONDO:1010120","xrefs":{"Monarch":{"xref_id":"1010120"}}}


id: PR:000036914
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/threonine-protein kinase gad8 that is encoded in the genome of Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase gad8 (Schizosaccharomyces pombe)","pombase_gene_id":"SPCC24B10.07","synonyms":[{"name":"Spom-gad8","type":"exact"}],"termid":"PR:000036914"}


id: MONDO:0016620
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A genetically and clinically heterogeneous inherited disorder characterized by digital clubbing and osteoarthropathy, with variable features of pachydermia, delayed closure of the fontanels, and congenital heart disease. There are two types of PHO: pachydermoperiostosis and cranio-osteoarthropathy.","definition_xrefs":["Orphanet:248095"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with increased bone density (obsolete MONDO:0019703)","termid":"MONDO:0019703"},{"relation_name":"excluded_subClassOf","term_name":"dermis disorder","termid":"MONDO:0021154"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary hypertrophic osteoarthropathy","secondary_identifiers":["UMLS:C0029411","icd11.foundation:792225761","DOID:14283","NANDO:1200642","NANDO:2100288","MEDGEN:18210","MESH:D010004","SCTID:88220006","Orphanet:2796","GARD:20667","NCIT:C85023","MedDRA:10051686","NANDO:2201004","OMIMPS:259100"],"synonyms":[{"name":"PDP","type":"exact"},{"name":"PHO","type":"exact"},{"name":"PHOAR1","type":"related"},{"name":"Touraine Solente Gole syndrome","type":"exact"},{"name":"Touraine-Solente-Gole syndrome","type":"exact"},{"name":"hypertrophic osteoarthropathy, primary","type":"exact"},{"name":"hypertrophic osteoarthropathy, primary, autosomal recessive, 1","type":"related"},{"name":"hypertrophic osteoarthropathy, primary, autosomal recessive, type 1","type":"exact"},{"name":"hypertropic osteoarthropathy, primary","type":"exact"},{"name":"idiopathic hypertrophic osteoarthropathy","type":"exact"},{"name":"pachydermoperiostosis","type":"exact"},{"name":"pachydermoperiostosis of nail","type":"exact"},{"name":"pachydermoperiostosis of nail [ambiguous]","type":"exact"},{"name":"pachydermoperiostosis syndrome","type":"exact"}],"termid":"MONDO:0016620","xrefs":{"Monarch":{"xref_id":"0016620"}}}


id: MONDO:0017727
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fixed subaortic stenosis (FSS) is a rare heart malformation characterized by the obstruction by membranous or fibromuscular tissue of the left ventricular outflow tract (LVOT) below the aortic valve, that occurs as an isolated lesion or in association with additional cardiac malformations (e.g. ventricular septal defect, patent ductus arteriosus, coarctation of the aorta), that presents in childhood with signs of LVOT obstruction (e.g. dyspnea, chest pain, syncope, palpitations) and that can potentially lead to life-threatening complications (e.g. aortic regurgitation, infective endocarditis). It comprises three anatomical subforms: discrete fixed membranous subaortic stenosis (membranous tissue encircling the LVOT), discrete fibromuscular subaortic stenosis (fibromuscular tissue encircling the LVOT) and tunnel subaortic stenosis (fibromuscular diffuse tunnel-like narrowing of the LVOT), the two latter forms being generally more severe than the membranous form.","definition_xrefs":["Orphanet:3092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital anomaly of the great arteries","termid":"MONDO:0020292"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fixed subaortic stenosis","secondary_identifiers":["MEDGEN:539538","UMLS:C0265853","icd11.foundation:1471062257","GARD:16619"],"termid":"MONDO:0017727","xrefs":{"Monarch":{"xref_id":"0017727"}}}


id: GO:0047274
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sucrose + 1-alpha-D-galactosyl-myo-inositol = raffinose + myo-inositol.","definition_xrefs":["MetaCyc:2.4.1.82-RXN","EC:2.4.1.82"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactosyltransferase activity","termid":"GO:0008378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"galactinol-sucrose galactosyltransferase activity","secondary_identifiers":["RHEA:20161"],"synonyms":[{"name":"1-alpha-D-galactosyl-myo-inositol:sucrose 6-alpha-D-galactosyltransferase activity","type":"related"},{"name":"alpha-D-galactosyl-(1->3)-myo-inositol:sucrose 6-alpha-D-galactosyltransferase activity","type":"related"},{"name":"galactinol:sucrose 6-galactosyl transferase activity","type":"exact"},{"name":"galactosyltransferase, galactinol-sucrose","type":"exact"},{"name":"raffinose synthase activity","type":"exact"}],"termid":"GO:0047274"}


id: PBO:0030815
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_aconitate_hydratase_activity","termid":"PBO:0030815"}


id: MONDO:0014727
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 45","secondary_identifiers":["OMIM:616669","UMLS:C4225252","MEDGEN:901044","DOID:0111994"],"synonyms":[{"name":"IMD45","type":"exact"},{"name":"immunodeficiency 45","type":"exact"},{"name":"immunodeficiency type 45","type":"exact"}],"termid":"MONDO:0014727","xrefs":{"Monarch":{"xref_id":"0014727"}}}


id: PBO:0011181
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"curator","termid":"PBO:0011181"}


id: PBO:0004020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MADS-box transcription factor Mbx1","termid":"PBO:0004020"}


id: MONDO:0009885
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Scott syndrome is an extremely rare congenital hemorrhagic disorder characterized by hemorrhagic episodes due to impaired platelet coagulant activity.","definition_xrefs":["Orphanet:806"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited bleeding disorder, platelet-type","termid":"MONDO:0000009"},{"relation_name":"is_a","term_name":"inherited blood coagulation disorder","termid":"MONDO:0021181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"Scott syndrome","secondary_identifiers":["DOID:0111052","icd11.foundation:186013982","OMIM:262890","MESH:C563120","NANDO:2200671","GARD:4777","MEDGEN:167107","UMLS:C0796149","SCTID:128098009"],"synonyms":[{"name":"BDPLT7","type":"exact"},{"name":"Platelet factor X receptor deficiency","type":"related"},{"name":"SCTS","type":"exact"},{"name":"Scott syndrome","type":"exact"},{"name":"bleeding Abnormality due to deficiency of Platelet binding of Factor 10","type":"related"},{"name":"bleeding abnormality due to deficiency of platelet biding of factor X","type":"exact"},{"name":"bleeding disorder, Platelet-type, 7","type":"related"},{"name":"familial prothrombin consumption inhibitor","type":"exact"},{"name":"familial prothrombin conversion defect","type":"exact"},{"name":"platelet-type bleeding disorder 7","type":"exact"},{"name":"prothrombin consumption deficiency","type":"exact"},{"name":"prothrombin consumption inhibitor, familial","type":"related"},{"name":"prothrombin conversion defect, familial","type":"related"}],"termid":"MONDO:0009885","xrefs":{"Monarch":{"xref_id":"0009885"}}}


id: PBO:0050988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraflagellar transport 74","termid":"PBO:0050988"}


id: MONDO:0000964
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant adipose tissue neoplasm of the skin.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoma","termid":"MONDO:0005106"},{"relation_name":"is_a","term_name":"benign neoplasm of skin","termid":"MONDO:0021440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"skin lipoma","secondary_identifiers":["SCTID:255187008","DOID:10188","ICD9:214.0","SCTID:93159009","ICD9:214.1","MEDGEN:91128","NCIT:C4616","UMLS:C0347394"],"synonyms":[{"name":"cutaneous lipoma","type":"exact"},{"name":"cutaneous lipomatous tumor","type":"exact"},{"name":"cutaneous lipomatous tumour","type":"exact"},{"name":"lipoma of face","type":"narrow"},{"name":"lipoma of skin","type":"exact"},{"name":"lipoma of the skin","type":"exact"},{"name":"lipoma of zone of skin","type":"exact"},{"name":"skin lipoma","type":"exact"},{"name":"zone of skin lipoma","type":"exact"}],"termid":"MONDO:0000964","xrefs":{"Monarch":{"xref_id":"0000964"}}}


id: PR:Q9US30
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rsm19 gene.","definition_xrefs":["UniProtKB:Q9US30","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S19, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1751.02c","synonyms":[{"name":"Spom972h-rsm19","type":"exact"}],"termid":"PR:Q9US30"}


id: GO:0009039
data:
  {"annotated_genes":["SJAG_02766"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73403],"is_not":false,"summary":null,"term":"GO:0009039"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: urea + H2O = CO2 + 2 NH3.","definition_xrefs":["EC:3.5.1.5","RHEA:20557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02766":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016810","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"urease activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["UM-BBD_reactionID:r0120","MetaCyc:UREASE-RXN"],"synonyms":[{"name":"urea amidohydrolase activity","type":"related"}],"termid":"GO:0009039","terms_by_termid":{"GO:0009039":null}}


id: GO:0009859
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which water is taken up by pollen.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"water transport","termid":"GO:0006833"},{"relation_name":"part_of","term_name":"pollen-pistil interaction","termid":"GO:0009875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"pollen hydration","termid":"GO:0009859"}


id: PBO:0046576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 18","termid":"PBO:0046576"}


id: MONDO:0018695
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection of domestic and wild fowl and other birds with influenza A virus. Avian influenza usually does not sicken birds, but can be highly pathogenic and fatal in domestic poultry.","definition_xrefs":["MESH:D005585"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"respiratory system disorder","termid":"MONDO:0005087"},{"relation_name":"is_a","term_name":"influenza","termid":"MONDO:0005812"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"avian influenza","secondary_identifiers":["Orphanet:454836","SCTID:55604004","UMLS:C0016627","EFO:0005222","GARD:21897","MEDGEN:42091","DOID:4492"],"synonyms":[{"name":"avian flu","type":"exact"},{"name":"bird flu","type":"exact"}],"termid":"MONDO:0018695","xrefs":{"Monarch":{"xref_id":"0018695"}}}


id: FYPO:0005955
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of the entire mitotic cell cycle is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle","termid":"FYPO:0000059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased duration of mitotic cell cycle","synonyms":[{"name":"increased duration of mitotic cell cycle during vegetative growth","type":"exact"},{"name":"prolonged mitotic cell cycle","type":"exact"}],"termid":"FYPO:0005955"}


id: MONDO:0011949
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Thai symphalangism syndrome","secondary_identifiers":["MEDGEN:374990","OMIM:608028","UMLS:C1842679","MESH:C564303"],"synonyms":[{"name":"Thai symphalangism syndrome","type":"exact"}],"termid":"MONDO:0011949","xrefs":{"Monarch":{"xref_id":"0011949"}}}


id: PBO:0046508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate rich 3","termid":"PBO:0046508"}


id: PR:Q09805
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vacuolar protein sorting-associated protein 45 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11679:SF3","PRO:DNx","OMA:SCHPO00316"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 45 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2G11.03c","secondary_identifiers":["UniProtKB:Q09805"],"synonyms":[{"name":"Spom972h-VPS45","type":"exact"}],"termid":"PR:Q09805"}


id: PBO:0005871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"21S rRNA","termid":"PBO:0005871"}


id: SO:1000088
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant causing a change in primary translation product of a transcript.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000088 sequence_variant_affecting_translational_product (obsolete SO:1000088)","synonyms":[{"name":"mutation affecting translational product","type":"related"},{"name":"mutation causing partially characterised change of translational product","type":"related"},{"name":"mutation causing uncharacterised change of translational product","type":"related"},{"name":"sequence variant affecting translational product","type":"exact"},{"name":"sequence variant causing partially characterised change of translational product","type":"exact"},{"name":"sequence variant causing uncharacterised change of translational product","type":"exact"},{"name":"sequence_variant_causing_partially_characterised_change_of_translational_product","type":"exact"},{"name":"sequence_variant_causing_uncharacterised_change_of_translational_product","type":"exact"}],"termid":"SO:1000088"}


id: MONDO:0022553
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BD syndrome","termid":"MONDO:0022553","xrefs":{"Monarch":{"xref_id":"0022553"}}}


id: PBO:0089839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEL1/TPR repeat protein, chitin synthase regulatory factor Cfh4/ predicted human COA7 ortholog","termid":"PBO:0089839"}


id: GO:0009541
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A three dimensional regular lattice found in etioplasts. It is composed of a continuous system of tubules but when exposed to light the symmetrical arrangement is rapidly lost as tubules become pinched off into two dimensional sections of lattice. These for perforated sheets of membrane that move apart, extend and increase, finally establishing the typical granal and intergranal lamellae of the mature chloroplast.","definition_xrefs":["ISBN:0140514031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"etioplast","termid":"GO:0009513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"etioplast prolamellar body","termid":"GO:0009541"}


id: FYPO:0007695
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the activity of a DNA strand exchange inhibitor is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:33493431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal molecular function","termid":"FYPO:0000706"},{"relation_name":"is_a","term_name":"catalytic activity regulator phenotype","termid":"FYPO:0007690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal DNA strand exchange inhibitor activity","synonyms":[{"name":"normal RecA-family recombinase inhibitor activity","type":"exact"},{"name":"normal negative regulation of RecA-family recombinase activity","type":"related"}],"termid":"FYPO:0007695"}


id: GO:0070306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a lens fiber cell, any of the elongated, tightly packed cells that make up the bulk of the mature lens in the camera-type eye. The cytoplasm of a lens fiber cell is devoid of most intracellular organelles including the cell nucleus, and contains primarily crystallins, a group of water-soluble proteins expressed in vary large quantities.","definition_xrefs":["PMID:7693735","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation","termid":"GO:0030855"},{"relation_name":"part_of","term_name":"lens development in camera-type eye","termid":"GO:0002088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lens fiber cell differentiation","synonyms":[{"name":"lens fibre cell differentiation","type":"exact"}],"termid":"GO:0070306"}


id: PBO:0053615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 654","termid":"PBO:0053615"}


id: PBO:0051720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INSM transcriptional repressor 1","termid":"PBO:0051720"}


id: GO:0018418
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of nickel into a 3Fe-2S complex by tris-L-cysteinyl L-cysteine persulfido L-glutamato L-histidino L-serinyl nickel triiron disulfide trioxide.","definition_xrefs":["RESID:AA0293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster assembly","termid":"GO:0016226"},{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"},{"relation_name":"is_a","term_name":"peptidyl-glutamic acid modification","termid":"GO:0018200"},{"relation_name":"is_a","term_name":"peptidyl-histidine modification","termid":"GO:0018202"},{"relation_name":"is_a","term_name":"nickel incorporation into metallo-sulfur cluster","termid":"GO:0018414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016226"}],"interesting_parent_ids":["GO:0016226","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"nickel incorporation into iron-sulfur cluster via tris-L-cysteinyl L-cysteine persulfido L-glutamato L-histidino L-serinyl nickel triiron disulfide trioxide","synonyms":[{"name":"nickel incorporation into iron-sulphur cluster via tris-L-cysteinyl L-cysteine persulphido L-glutamato L-histidino L-serinyl nickel triiron disulphide trioxide","type":"exact"}],"termid":"GO:0018418"}


id: PBO:0053455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 407","termid":"PBO:0053455"}


id: PBO:0090411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterochromatin (HP1) family chromodomain protein Chp1","termid":"PBO:0090411"}


id: GO:0052702
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of compounds derived from histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid catabolic process","termid":"GO:0042219"},{"relation_name":"is_a","term_name":"modified histidine metabolic process","termid":"GO:0052701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modified histidine catabolic process","synonyms":[{"name":"cellular histidine derivative breakdown","type":"exact"},{"name":"cellular histidine derivative catabolic process","type":"exact"},{"name":"cellular histidine derivative catabolism","type":"exact"},{"name":"cellular histidine derivative degradation","type":"exact"},{"name":"cellular modified histidine breakdown","type":"exact"},{"name":"cellular modified histidine catabolic process","type":"exact"},{"name":"cellular modified histidine catabolism","type":"exact"},{"name":"cellular modified histidine degradation","type":"exact"},{"name":"histidine derivative catabolic process","type":"exact"},{"name":"modified histidine catabolism","type":"exact"}],"termid":"GO:0052702"}


id: GO:0090472
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any protein processing achieved by the cleavage of a peptide bond after two basic amino acids within a protein.","definition_xrefs":["GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein processing","termid":"GO:0016485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051604","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"dibasic protein processing","termid":"GO:0090472"}


id: PR:Q1MTR8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1795.10c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q1MTR8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein svp26 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1795.10c","synonyms":[{"name":"Spom972h-SPCC1795.10c","type":"exact"}],"termid":"PR:Q1MTR8"}


id: GO:0018997
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete electron transfer carrier (obsolete GO:0018997)","synonyms":[{"name":"electron transfer carrier","type":"exact"}],"termid":"GO:0018997"}


id: FYECO:0000046
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which margaric acid was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ fatty acid","termid":"FYECO:0000042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ margaric acid","termid":"FYECO:0000046"}


id: GO:0002413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process of tolerance induction which leads to immunological tolerance of a tumor.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response to tumor cell","termid":"GO:0002418"},{"relation_name":"is_a","term_name":"peripheral tolerance induction","termid":"GO:0002465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tolerance induction to tumor cell","termid":"GO:0002413"}


id: GO:0043103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that generates hypoxanthine, 6-hydroxy purine, from derivatives of it without de novo synthesis.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase salvage","termid":"GO:0043096"},{"relation_name":"is_a","term_name":"hypoxanthine biosynthetic process","termid":"GO:0046101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"hypoxanthine salvage","synonyms":[{"name":"adenine, hypoxanthine and their nucleoside salvage","type":"narrow"},{"name":"guanine, xanthine and their nucleoside salvage","type":"narrow"}],"termid":"GO:0043103"}


id: PBO:0085069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-functional protein with homology IMP dehydrogenase; YAR073W/IMD1 and YAR075W comprise a continuous reading frame in most strains of S. cerevisiae; YAR073W/YAR075W together have a paralog, IMD2, that arose from a segmental duplication","termid":"PBO:0085069"}


id: PBO:0085392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane Mg(2+) transporter; expression and turnover are regulated by Mg(2+) concentration; overexpression confers increased tolerance to Al(3+) and Ga(3+) ions; magnesium transport defect of the null mutant is functionally complemented by either of the human genes MAGT1 and TUSC3 that are not orthologous to ALR1","termid":"PBO:0085392"}


id: PBO:0051938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intelectin 2","termid":"PBO:0051938"}


id: PBO:0065480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome activator subunit 1","termid":"PBO:0065480"}


id: PBO:0082095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-phosphogluconolactonase; catalyzes the second step of the pentose phosphate pathway; weak multicopy suppressor of los1-1 mutation; homologous to Sol2p and Sol1p; SOL3 has a paralog, SOL4, that arose from the whole genome duplication","termid":"PBO:0082095"}


id: GO:0015057
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A G protein-coupled receptor activity that is activated by cleavage by thrombin, which exposes a tethered ligand corresponding to the new N-terminus, which binds to the receptor and activates it.","definition_xrefs":["GOC:pg","PMID:20423334","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteinase-activated receptor activity","termid":"GO:0001648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"thrombin-activated receptor activity","secondary_identifiers":["GO:0010655"],"synonyms":[{"name":"thrombin receptor activity","type":"exact"},{"name":"thrombin receptor activity, G-protein coupled","type":"exact"}],"termid":"GO:0015057"}


id: GO:0047245
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetyl-D-glucosaminyldiphosphoundecaprenol + UDP-D-glucose = beta-D-glucosyl-1,4-N-acetyl-D-glucosaminyldiphosphoundecaprenol + UDP.","definition_xrefs":["EC:2.4.1.188","MetaCyc:2.4.1.188-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"N-acetylglucosaminyldiphosphoundecaprenol glucosyltransferase activity","secondary_identifiers":["RHEA:20952"],"synonyms":[{"name":"UDP-D-glucose:N-acetylglucosaminyl pyrophosphorylundecaprenol glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:N-acetyl-D-glucosaminyldiphosphoundecaprenol 4-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:N-acetyl-D-glucosaminyldiphosphoundecaprenol 4-beta-D-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-acetylglucosaminylpyrophosphorylundecaprenol glucosyltransferase activity","type":"related"}],"termid":"GO:0047245"}


id: GO:2000361
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of prostaglandin-E synthase activity.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of prostaglandin-E synthase activity (obsolete GO:2000361)","synonyms":[{"name":"regulation of (5Z,13E)-(15S)-9alpha,11alpha-epidioxy-15-hydroxyprosta-5,13-dienoate E-isomerase activity","type":"exact"},{"name":"regulation of PGE isomerase activity","type":"exact"},{"name":"regulation of PGE2 isomerase activity","type":"exact"},{"name":"regulation of PGH-PGE isomerase activity","type":"exact"},{"name":"regulation of Prostaglandin-H(2) E-isomerase activity","type":"exact"},{"name":"regulation of endoperoxide isomerase activity","type":"exact"},{"name":"regulation of prostaglandin H-E isomerase activity","type":"exact"},{"name":"regulation of prostaglandin R-prostaglandin E isomerase activity","type":"exact"},{"name":"regulation of prostaglandin endoperoxide E isomerase activity","type":"exact"},{"name":"regulation of prostaglandin endoperoxide E2 isomerase activity","type":"exact"},{"name":"regulation of prostaglandin-H2 E-isomerase activity","type":"exact"}],"termid":"GO:2000361"}


id: GO:0005553
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A protein encoded by some ubiquitin genes which consists of a single copy of ubiquitin fused to a ribosomal protein.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete ubiquitin-ribosomal protein fusion protein (obsolete GO:0005553)","synonyms":[{"name":"ubiquitin-ribosomal protein fusion protein","type":"exact"}],"termid":"GO:0005553"}


id: GO:0006809
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of nitric oxide, nitrogen monoxide (NO), a colorless gas only slightly soluble in water.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"nitric oxide metabolic process","termid":"GO:0046209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nitric oxide biosynthetic process","synonyms":[{"name":"nitric oxide anabolism","type":"exact"},{"name":"nitric oxide biosynthesis","type":"exact"},{"name":"nitric oxide formation","type":"exact"},{"name":"nitric oxide synthesis","type":"exact"}],"termid":"GO:0006809"}


id: PBO:0079145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspanin 7","termid":"PBO:0079145"}


id: PBO:0038632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA:amino acid N-acyltransferase pseudogene","termid":"PBO:0038632"}


id: PBO:0071969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 kinase B2","termid":"PBO:0071969"}


id: PBO:0048477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosaminyl (N-acetyl) transferase 1 pseudogene 4","termid":"PBO:0048477"}


id: MONDO:0024346
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"exanthem","termid":"MONDO:0006547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"pityriasis amiantacea","secondary_identifiers":["UMLS:C0343100","icd11.foundation:210953452","SCTID:238924007","ICD9:696.5","MEDGEN:575384"],"synonyms":[{"name":"pityriasis amiantacea","type":"exact"},{"name":"tinea amiantacea","type":"related"}],"termid":"MONDO:0024346","xrefs":{"Monarch":{"xref_id":"0024346"}}}


id: PBO:0041433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 8 open reading frame 90","termid":"PBO:0041433"}


id: GO:0070284
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-amino-1-(5-phospho-beta-D-ribosyl)imidazole + S-adenosyl-L-methionine = 4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine + CO + 5'-deoxyadenosine + formate + L-methionine + 3 H+.","definition_xrefs":["RHEA:24840","PMID:18953358"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-carbon lyase activity","termid":"GO:0016830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"phosphomethylpyrimidine synthase activity","secondary_identifiers":["EC:4.1.99.17"],"synonyms":[{"name":"4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate synthase activity","type":"exact"},{"name":"HMP-P synthase activity","type":"exact"},{"name":"ThiC","type":"related"}],"termid":"GO:0070284"}


id: GO:0048088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of establishment of a pattern of pigment in males.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental pigmentation","termid":"GO:0048070"},{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"male pigmentation","termid":"GO:0048094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of male pigmentation","termid":"GO:0048088"}


id: MONDO:0021463
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the parathyroid gland.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign endocrine neoplasm","termid":"MONDO:0000627"},{"relation_name":"is_a","term_name":"tumor of parathyroid gland","termid":"MONDO:0021360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of parathyroid gland","secondary_identifiers":["UMLS:C0154041","NCIT:C3630","MEDGEN:57814","DOID:60008","ICD9:227.1","icd11.foundation:455097662","ICD10CM:D35.1","SCTID:92272009"],"synonyms":[{"name":"benign neoplasm of parathyroid","type":"exact"},{"name":"benign neoplasm of the parathyroid","type":"exact"},{"name":"benign neoplasm of the parathyroid gland","type":"exact"},{"name":"benign parathyroid gland neoplasm","type":"exact"},{"name":"benign parathyroid gland tumor","type":"exact"},{"name":"benign parathyroid gland tumour","type":"exact"},{"name":"benign parathyroid neoplasm","type":"exact"},{"name":"benign parathyroid tumor","type":"exact"},{"name":"benign parathyroid tumour","type":"exact"},{"name":"benign tumor of parathyroid","type":"exact"},{"name":"benign tumor of parathyroid gland","type":"exact"},{"name":"benign tumor of the parathyroid","type":"exact"},{"name":"benign tumor of the parathyroid gland","type":"exact"},{"name":"benign tumour of parathyroid","type":"exact"},{"name":"benign tumour of parathyroid gland","type":"exact"},{"name":"benign tumour of the parathyroid","type":"exact"},{"name":"benign tumour of the parathyroid gland","type":"exact"},{"name":"parathyroid gland benign neoplasm","type":"exact"},{"name":"parathyroid tumor benign","type":"exact"},{"name":"parathyroid tumour benign","type":"exact"}],"termid":"MONDO:0021463","xrefs":{"Monarch":{"xref_id":"0021463"}}}


id: PBO:0071687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 19","termid":"PBO:0071687"}


id: PBO:0086553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YGL118C is not an essential gene","termid":"PBO:0086553"}


id: PBO:0003297
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hereditary spastic paraplegia","termid":"PBO:0003297"}


id: MONDO:0015368
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete neuro-ophthalmological disease (obsolete MONDO:0015368)","secondary_identifiers":["Orphanet:140653"],"termid":"MONDO:0015368","xrefs":{"Monarch":{"xref_id":"0015368"}}}


id: GO:0034675
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An integrin complex that comprises one alpha6 subunit and one beta1 subunit.","definition_xrefs":["PMID:12297042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrin complex","termid":"GO:0008305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"integrin alpha6-beta1 complex","synonyms":[{"name":"ITGA6-ITGB1 complex","type":"narrow"},{"name":"VLA-6 complex","type":"exact"},{"name":"alpha6-beta1 integrin complex","type":"exact"}],"termid":"GO:0034675"}


id: PBO:0114110
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"much shorter than S. c Ina22, butpicked up by Jackhmmr with good score/motif conservation","termid":"PBO:0114110"}


id: PBO:0018105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rad16 homolog ATP-dependent DNA helicase/ ubiquitin protein ligase E3 Rhp16","termid":"PBO:0018105"}


id: PBO:0051425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-2 (pseudogene)","termid":"PBO:0051425"}


id: GO:1990908
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Hydrolysis of Lys63-Linked ubiquitin unit(s) from a ubiquitinated protein by a mechanism where zinc acts as the nucleophile.","definition_xrefs":["PMID:26368668"],"gene_count":0,"genotype_count":0,"name":"obsolete Lys63-specific zinc metallopeptidase deubiquitinase activity (obsolete GO:1990908)","termid":"GO:1990908"}


id: GO:1900110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of histone H3-K9 dimethylation.","definition_xrefs":["GOC:vw","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone H3-K9 dimethylation (obsolete GO:1900110)","synonyms":[{"name":"down regulation of histone H3 K9 dimethylation","type":"exact"},{"name":"down regulation of histone H3-K9 dimethylation","type":"exact"},{"name":"down regulation of histone lysine H3 K9 dimethylation","type":"exact"},{"name":"down-regulation of histone H3 K9 dimethylation","type":"exact"},{"name":"down-regulation of histone H3-K9 dimethylation","type":"exact"},{"name":"down-regulation of histone lysine H3 K9 dimethylation","type":"exact"},{"name":"downregulation of histone H3 K9 dimethylation","type":"exact"},{"name":"downregulation of histone H3-K9 dimethylation","type":"exact"},{"name":"downregulation of histone lysine H3 K9 dimethylation","type":"exact"},{"name":"inhibition of histone H3 K9 dimethylation","type":"narrow"},{"name":"inhibition of histone H3-K9 dimethylation","type":"narrow"},{"name":"inhibition of histone lysine H3 K9 dimethylation","type":"narrow"},{"name":"negative regulation of histone H3 K9 dimethylation","type":"exact"},{"name":"negative regulation of histone lysine H3 K9 dimethylation","type":"exact"}],"termid":"GO:1900110"}


id: GO:0120322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A lipid modification process in which one or more groups of a small protein, such as ubiquitin or a ubiquitin-like protein, are covalently attached to a target lipid.","definition_xrefs":["GOC:sp","PMID:34012115"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid modification","termid":"GO:0030258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"lipid modification by small protein conjugation","termid":"GO:0120322"}


id: GO:0006998
data:
  {"annotated_genes":["SJAG_01356","SJAG_04509","SJAG_03073","SJAG_01745","SJAG_03892","SJAG_01906","SJAG_04271","SJAG_01050","SJAG_04319","SJAG_03449","SJAG_05207","SJAG_02763","SJAG_00680","SJAG_01460","SJAG_03491","SJAG_04578","SJAG_04489","SJAG_00840","SJAG_04883","SJAG_01422","SJAG_00810","SJAG_01467","SJAG_03891","SJAG_03313","SJAG_03592","SJAG_03940","SJAG_03783","SJAG_00416","SJAG_00900","SJAG_04464","SJAG_04972","SJAG_01242","SJAG_01263","SJAG_03219"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79912,93551,114606,121228],"is_not":false,"summary":null,"term":"GO:0006998"},{"annotations":[103262,95650],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140515"},{"annotations":[89708,94870,111759,100168,112171,99500],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0101026"},{"annotations":[112311],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007077"},{"annotations":[121197,121223,121437],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0101024"},{"annotations":[108396,97780,104969,121462,102711,121463,93157,121461,99772,121464],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007084"},{"annotations":[105482],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140516"},{"annotations":[93158,72284],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071765"},{"annotations":[80389],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0048288"},{"annotations":[105279,111579,121265,93762,107788,109556],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071763"},{"annotations":[73854],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031468"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the nuclear envelope.","definition_xrefs":["GOC:mah","GOC:ems","GOC:jl","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"},{"relation_name":"part_of","term_name":"nucleus organization","termid":"GO:0006997"},{"relation_name":"part_of","term_name":"endomembrane system organization","termid":"GO:0010256"}],"gene_count":34,"genes_by_uniquename":{"SJAG_00416":null,"SJAG_00680":null,"SJAG_00810":null,"SJAG_00840":null,"SJAG_00900":null,"SJAG_01050":null,"SJAG_01242":null,"SJAG_01263":null,"SJAG_01356":null,"SJAG_01422":null,"SJAG_01460":null,"SJAG_01467":null,"SJAG_01745":null,"SJAG_01906":null,"SJAG_02763":null,"SJAG_03073":null,"SJAG_03219":null,"SJAG_03313":null,"SJAG_03449":null,"SJAG_03491":null,"SJAG_03592":null,"SJAG_03783":null,"SJAG_03891":null,"SJAG_03892":null,"SJAG_03940":null,"SJAG_04271":null,"SJAG_04319":null,"SJAG_04464":null,"SJAG_04489":null,"SJAG_04509":null,"SJAG_04578":null,"SJAG_04883":null,"SJAG_04972":null,"SJAG_05207":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"nuclear envelope organization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21802294":null,"PMID:24184107":null,"PMID:26774782":null,"PMID:28954740":null,"PMID:32243490":null},"synonyms":[{"name":"nuclear envelope organisation","type":"exact"},{"name":"nuclear envelope organization and biogenesis","type":"related"}],"termid":"GO:0006998","terms_by_termid":{"GO:0006998":null,"GO:0007077":null,"GO:0007084":null,"GO:0031468":null,"GO:0048288":null,"GO:0071763":null,"GO:0071765":null,"GO:0101024":null,"GO:0101026":null,"GO:0140515":null,"GO:0140516":null}}


id: MONDO:0009529
data:
  {"annotated_genes":["SJAG_03290"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86994],"is_not":false,"summary":null,"term":"MONDO:0009529"}]},"cv_name":"mondo","definition":"Pyruvate dehydrogenase E3 deficiency is a very rare subtype of pyruvate dehydrogenase deficiency (PDHD) characterized by either early-onset lactic acidosis and delayed development, later-onset neurological dysfunction or liver disease.","definition_xrefs":["Orphanet:2394"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"inborn mitochondrial myopathy","termid":"MONDO:0009637"},{"relation_name":"is_a","term_name":"maple syrup urine disease","termid":"MONDO:0009563"},{"relation_name":"is_a","term_name":"inherited lipoic acid biosynthesis defect","termid":"MONDO:0018424"},{"relation_name":"is_a","term_name":"pyruvate dehydrogenase deficiency","termid":"MONDO:0019169"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0002525","MONDO:0004069","MONDO:0005244","MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"pyruvate dehydrogenase E3 deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5574660","MEDGEN:1805500","SCTID:29914000","GARD:3263","OMIM:246900"],"synonyms":[{"name":"DLD deficiency","type":"exact"},{"name":"DLDD","type":"related"},{"name":"Dld deficiency","type":"related"},{"name":"E3 deficiency","type":"related"},{"name":"E3-deficient maple syrup urine disease","type":"exact"},{"name":"dihydrolipoamide dehydrogenase deficiency","type":"exact"},{"name":"lipoamide dehydrogenase deficiency, lactic acidosis due to","type":"related"},{"name":"maple syrup urine disease, type 3","type":"related"},{"name":"maple syrup urine disease, type III","type":"related"},{"name":"pyruvate dehydrogenase E3 deficiency","type":"exact"}],"termid":"MONDO:0009529","terms_by_termid":{"MONDO:0009529":null},"xrefs":{"Monarch":{"xref_id":"0009529"}}}


id: PBO:0050873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isocitrate dehydrogenase (NAD(+)) 3 catalytic subunit alpha","termid":"PBO:0050873"}


id: PBO:0062019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily L member 13","termid":"PBO:0062019"}


id: PBO:0116761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMARCE1 pseudogene 7","termid":"PBO:0116761"}


id: PBO:0051237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (II)-44-2 (pseudogene)","termid":"PBO:0051237"}


id: MONDO:0005477
data:
  {"annotated_genes":["SJAG_04901","SJAG_02717","SJAG_04781"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87731],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013529"},{"annotations":[89006,89007],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013966"},{"annotations":[88499,88500],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032915"}]},"cv_name":"mondo","definition":"A disorder characterized by an electrocardiographic finding of three or more consecutive complexes of ventricular origin with a rate greater than a certain threshold (100 or 120 beats per minute are commonly used). The QRS complexes are wide and have an abnormal morphology. (CDISC)","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac rhythm disease","termid":"MONDO:0007263"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02717":null,"SJAG_04781":null,"SJAG_04901":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"ventricular tachycardia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C50802","NANDO:2100049","SCTID:25569003","ICD10CM:I47.2","MESH:D017180","EFO:0005306","icd11.foundation:1171837620","UMLS:C0042514","MEDGEN:12068"],"termid":"MONDO:0005477","terms_by_termid":{"MONDO:0013529":null,"MONDO:0013966":null,"MONDO:0032915":null},"xrefs":{"Monarch":{"xref_id":"0005477"}}}


id: GO:0097443
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multivesicular body surrounded by and connected with multiple tubular compartments with associated vesicles.","definition_xrefs":["NIF_Subcellular:sao1028571114"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosome","termid":"GO:0005768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005768"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575","GO:0005768"],"is_obsolete":false,"name":"sorting endosome","synonyms":[{"name":"MVB-tubule complex","type":"related"}],"termid":"GO:0097443"}


id: MOD:01551
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the N6'-hydrogen atom of a lysine residue with the Applied Biosystems iTRAQ8plex-116 reporter+balance group.","definition_xrefs":["Unimod:730#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-116 reporter+balance reagent acylated residue","termid":"MOD:01549"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent N-acylated residue","termid":"MOD:01710"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"iTRAQ8plex-116 reporter+balance reagent N6-acylated lysine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Representative mass and accurate mass for 113, 114, 116 & 117","type":"related"},{"name":"iTRAQ8plex","type":"related"},{"name":"iTRAQ8plex:13C(7)15N(1)","type":"related"}],"termid":"MOD:01551"}


id: PBO:0029688
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_hydrogen_peroxide-induced_proteins_during_vegetative_growth","termid":"PBO:0029688"}


id: FYPO:0002626
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show decreased sensitivity to heat.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"resistance to stress during vegetative growth","termid":"FYPO:0000850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"resistance to heat","synonyms":[{"name":"heat resistance","type":"exact"},{"name":"increased growth during cellular response to heat","type":"exact"},{"name":"increased vegetative cell population growth during cellular response to heat","type":"exact"},{"name":"resistance to heat during mitotic cell cycle","type":"related"},{"name":"resistance to heat during vegetative growth","type":"exact"},{"name":"resistance to high temperature","type":"exact"},{"name":"resistant to heat","type":"exact"}],"termid":"FYPO:0002626"}


id: GO:0021522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuroepithelial cells in the ventral neural tube acquire specialized structural and/or functional features of motor neurons. Motor neurons innervate an effector (muscle or glandular) tissue and are responsible for transmission of motor impulses from the brain to the periphery. Differentiation includes the processes involved in commitment of a cell to a specific fate.","definition_xrefs":["GOC:jid","GO_REF:0000021","GOC:dph","PMID:11262869","GOC:cls","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation in spinal cord","termid":"GO:0021515"},{"relation_name":"is_a","term_name":"central nervous system neuron differentiation","termid":"GO:0021953"},{"relation_name":"part_of","term_name":"ventral spinal cord development","termid":"GO:0021517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spinal cord motor neuron differentiation","termid":"GO:0021522"}


id: GO:0046625
data:
  {"annotated_genes":["SJAG_03690","SJAG_01848"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110485],"is_not":false,"summary":null,"term":"GO:0046625"},{"annotations":[119380],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097001"}]},"cv_name":"molecular_function","definition":"Binding to a sphingolipid, a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid binding","termid":"GO:0008289"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01848":null,"SJAG_03690":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0008289","GO:0005488"],"is_obsolete":false,"name":"sphingolipid binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0046625","terms_by_termid":{"GO:0046625":null,"GO:0097001":null}}


id: PBO:0000809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMT1 subfamily","termid":"PBO:0000809"}


id: MONDO:0016188
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"qualitative or quantitative defects of myofibrillar proteins","termid":"MONDO:0016186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"qualitative or quantitative defects of alphaB-cristallin","secondary_identifiers":["UMLS:C5680838","GARD:20427","MEDGEN:1843314","Orphanet:209044"],"termid":"MONDO:0016188","xrefs":{"Monarch":{"xref_id":"0016188"}}}


id: PBO:0067878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 180","termid":"PBO:0067878"}


id: PBO:0066296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 2 member X, pseudogene","termid":"PBO:0066296"}


id: PBO:0029728
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_1,3-beta-D-glucan_synthase_activity_during_growth_on_aculeacin_A","termid":"PBO:0029728"}


id: MONDO:0035663
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neuromyelitis optica","termid":"MONDO:0019100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"neuromyelitis optica spectrum disorder with anti-AQP4 antibodies","secondary_identifiers":["ICD10CM:G36.0","GARD:22372","Orphanet:592850","icd11.foundation:73324466","MEDGEN:1842475","UMLS:C5680295"],"synonyms":[{"name":"NMOSD with anti-AQP4 antibodies","type":"exact"},{"name":"Neuromyelitis optica spectrum disorder with anti-aquaporin 4 antibodies","type":"exact"}],"termid":"MONDO:0035663","xrefs":{"Monarch":{"xref_id":"0035663"}}}


id: FYPO:0004237
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to heterochromatin at centromere outer repeat regions of a chromosome is decreased.","definition_xrefs":["PMID:20299449","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to heterochromatin during vegetative growth","termid":"FYPO:0001131"},{"relation_name":"is_a","term_name":"increased protein localization to chromatin at centromere outer repeat","termid":"FYPO:0006682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"increased protein localization to heterochromatin at centromere outer repeat","synonyms":[{"name":"increased protein localisation to heterochromatin at centromere otr","type":"exact"},{"name":"increased protein localisation to heterochromatin at centromere outer repeat","type":"exact"},{"name":"increased protein localisation to heterochromatin at centromeric outer repeat region","type":"exact"},{"name":"increased protein localisation to heterochromatin at pericentric region","type":"related"},{"name":"increased protein localisation to heterochromatin at pericentromeric region","type":"related"},{"name":"increased protein localization to heterochromatin at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"increased protein localization to heterochromatin at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0004237"}


id: PBO:0062891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovo like zinc finger 3","termid":"PBO:0062891"}


id: MONDO:0011323
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any syndromic disease characterized by severe hypoplasia of the nose and eyes, palatal abnormalities, deficient taste and smell, inguinal hernias, hypogonadotropic hypogonadism with cryptorchidism, and normal intelligence that occurs due to variation in the SMCHD1 gene.","definition_xrefs":["OMIM:603457"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"congenital hypogonadotropic hypogonadism","termid":"MONDO:0015770"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arhinia, choanal atresia, and microphthalmia","secondary_identifiers":["MESH:C537429","Orphanet:1135","UMLS:C1863878","MEDGEN:355084","SCTID:720511000","Orphanet:2250"],"synonyms":[{"name":"BAMS","type":"exact"},{"name":"Bosma Arhinia Microphthalmia Syndrome","type":"exact"},{"name":"Bosma Henkin Christiansen syndrome","type":"exact"},{"name":"Bosma arhinia microphthalmia syndrome","type":"exact"},{"name":"Bosma arhinia-microphthalmia syndrome","type":"exact"},{"name":"Bosma-Henkin-Christiansen syndrome","type":"exact"},{"name":"arhinia choanal atresia microphthalmia","type":"exact"},{"name":"arrhinia-choanal atresia-microphthalmia syndrome","type":"exact"},{"name":"congenital absence of nose and anterior nasopharynx","type":"related"},{"name":"hyposmia-nasal and ocular hypoplasia-hypogonadotropic hypogonadism syndrome","type":"exact"}],"termid":"MONDO:0011323","xrefs":{"Monarch":{"xref_id":"0011323"}}}


id: MONDO:0009163
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"encephalomalacia, multilocular","secondary_identifiers":["UMLS:C1856991","MESH:C565597","MEDGEN:341670","OMIM:225700"],"synonyms":[{"name":"encephalomalacia, multilocular","type":"exact"}],"termid":"MONDO:0009163","xrefs":{"Monarch":{"xref_id":"0009163"}}}


id: PBO:0044838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 126","termid":"PBO:0044838"}


id: PATO:0002128
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering a bearer by virtue of the bearer's containing or resembling serum.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"composition","termid":"PATO:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serous","termid":"PATO:0002128"}


id: PATO:0001341
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A S. cerevisiae mating type cells that secrete a pheromone that in alpha haploids stimulates processes that lead to mating.","definition_xrefs":["MGED:MGED"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Saccharomyces cerevisiae mating type","termid":"PATO:0001342"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"a mating type (yeast)","synonyms":[{"name":"a","type":"broad"}],"termid":"PATO:0001341"}


id: FYECO:0000179
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which cysteine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ cysteine","synonyms":[{"name":"C added","type":"exact"},{"name":"Cys added","type":"exact"}],"termid":"FYECO:0000179"}


id: GO:0030909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The post-translational removal of peptide sequences from within a protein sequence, by a process not involving inteins.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein splicing","termid":"GO:0030908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0051604","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"non-intein-mediated protein splicing","termid":"GO:0030909"}


id: PR:Q9UTB0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC25B8.08 gene.","definition_xrefs":["UniProtKB:Q9UTB0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dilute domain-containing protein C25B8.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25B8.08","synonyms":[{"name":"Spom972h-SPAC25B8.08","type":"exact"}],"termid":"PR:Q9UTB0"}


id: FYPO:0006886
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a protein measured at or associated with the mitotic spindle is greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle","termid":"FYPO:0000338"},{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000120","FYPO:0002399","FYPO:0000054"],"is_obsolete":false,"name":"increased protein level at mitotic spindle","synonyms":[{"name":"increased protein level at mitotic spindle during mitotic cell cycle","type":"related"},{"name":"increased protein level at mitotic spindle during vegetative growth","type":"exact"},{"name":"increased protein level in mitotic spindle","type":"exact"},{"name":"protein accumulation at mitotic spindle","type":"exact"}],"termid":"FYPO:0006886"}


id: PBO:0059052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAX network transcriptional repressor","termid":"PBO:0059052"}


id: PBO:0071231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 72","termid":"PBO:0071231"}


id: PBO:0081716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 644","termid":"PBO:0081716"}


id: PR:Q10346
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1F12.04c gene.","definition_xrefs":["UniProtKB:Q10346","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1F12.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F12.04c","synonyms":[{"name":"Spom972h-SPAC1F12.04c","type":"exact"}],"termid":"PR:Q10346"}


id: GO:0016011
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that includes alpha- and beta-dystroglycan, which are alternative products of the same gene; the laminin-binding component of the dystrophin-associated glycoprotein complex, providing a link between the subsarcolemmal cytoskeleton (in muscle cells) and the extracellular matrix. Alpha-dystroglycan is an extracellular protein binding to alpha-laminin and to beta-dystroglycan; beta-dystroglycan is a transmembrane protein which binds alpha-dystroglycan and dystrophin.","definition_xrefs":["PMID:15117830","PMID:16710609"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"dystrophin-associated glycoprotein complex","termid":"GO:0016010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"dystroglycan complex","termid":"GO:0016011"}


id: GO:0015800
data:
  {"annotated_genes":["SJAG_03256","SJAG_00522"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105652],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090515"},{"annotations":[98376],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015813"}]},"cv_name":"biological_process","definition":"The directed movement of acidic amino acids, amino acids with a pH below 7, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transport","termid":"GO:0006865"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00522":null,"SJAG_03256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"acidic amino acid transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015800","terms_by_termid":{"GO:0015813":null,"GO:0090515":null}}


id: PBO:0086308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with NADP(H) oxidoreductase activity; transcription is regulated by Stb5p in response to NADPH depletion induced by diamide; promoter contains a putative Stb5p binding site; protein abundance increases in response to DNA replication stress","termid":"PBO:0086308"}


id: _global:genomically_related_to
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"holds between two entities when some genome-level process such as gene expression is involved. This includes transcriptional, spliceosomal events. These relations can be used between either macromolecule entities (such as regions of nucleic acid) or between their abstract informational counterparts.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genomically_related_to","secondary_identifiers":["RO:0002330"],"termid":"_global:genomically_related_to"}


id: GO:0015389
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: (pyrimidine nucleoside or adenosine)(out) + Na+(out) = (pyrimidine nucleoside or adenosine)(in) + Na+(in).","definition_xrefs":["TC:2.A.41.2.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase transmembrane transporter activity","termid":"GO:0005345"},{"relation_name":"is_a","term_name":"pyrimidine nucleobase transmembrane transporter activity","termid":"GO:0005350"},{"relation_name":"is_a","term_name":"nucleoside:sodium symporter activity","termid":"GO:0005415"},{"relation_name":"is_a","term_name":"nucleobase:monoatomic cation symporter activity","termid":"GO:0015391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"pyrimidine- and adenosine-specific:sodium symporter activity","synonyms":[{"name":"pyrimidine- and adenine-specific:sodium symporter activity","type":"related"}],"termid":"GO:0015389"}


id: PBO:0056372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase 8 interacting protein 1","termid":"PBO:0056372"}


id: MONDO:0001043
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete diaphragm disease (obsolete MONDO:0001043)","termid":"MONDO:0001043","xrefs":{"Monarch":{"xref_id":"0001043"}}}


id: FYPO:0007570
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which septation initiation network signaling takes place at both mitotic spindle pole bodies. Normally, SIN signaling occurs only at the new SPB.","definition_xrefs":["PomBase:mah","PMID:15132994"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septation initiation network signaling","termid":"FYPO:0007569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000298"],"is_obsolete":false,"name":"septation initiation network signaling from both mitotic spindle pole bodies","synonyms":[{"name":"SIN signaling from both mitotic SPBs","type":"exact"},{"name":"SIN signaling from both mitotic spindle pole bodies","type":"exact"},{"name":"abnormal septation initiation network signaling from both mitotic spindle pole bodies","type":"exact"},{"name":"septation initiation network signaling from both mitotic SPBs","type":"exact"},{"name":"septation initiation network signaling from both mitotic spindle pole bodies during mitotic cell cycle","type":"related"},{"name":"septation initiation network signaling from both mitotic spindle pole bodies during vegetative growth","type":"exact"},{"name":"septation initiation network signaling from old and new mitotic SPBs","type":"exact"},{"name":"septation initiation network signaling from old and new mitotic spindle pole bodies","type":"exact"},{"name":"septation initiation network signalling from both mitotic spindle pole bodies","type":"exact"},{"name":"septation initiation signaling from both mitotic spindle pole bodies","type":"exact"}],"termid":"FYPO:0007570"}


id: GO:0044271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of organic and inorganic nitrogenous compounds.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular nitrogen compound biosynthetic process (obsolete GO:0044271)","termid":"GO:0044271"}


id: MONDO:0007282
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cataract that has material basis in variation in the region 2pter-p24.","definition_xrefs":["PMID:15933805","DOID:0110232"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cataract","termid":"MONDO:0005129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 29","secondary_identifiers":["GARD:18233","OMIM:115800","UMLS:C3805409","MEDGEN:811739"],"synonyms":[{"name":"CTRCT29","type":"related"},{"name":"cataract 29","type":"exact"},{"name":"cataract 29 coralliform","type":"exact"},{"name":"cataract 29, coralliform","type":"related"},{"name":"cataract type 29","type":"exact"}],"termid":"MONDO:0007282","xrefs":{"Monarch":{"xref_id":"0007282"}}}


id: PBO:0085319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylinositol 3-phosphate (PI3P) phosphatase; involved in various protein sorting pathways, including CVT targeting and endosome to vacuole transport; has similarity to the conserved myotubularin dual specificity phosphatase family","termid":"PBO:0085319"}


id: GO:0031634
data:
  {"annotated_genes":["SJAG_00073","SJAG_00247","SJAG_04855"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95167],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990943"},{"annotations":[116890],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043110"},{"annotations":[104103],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110035"}]},"cv_name":"molecular_function","definition":"Binding to replication fork barriers, sites that inhibit the progress of replication forks.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence-specific double-stranded DNA binding","termid":"GO:1990837"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00073":null,"SJAG_00247":null,"SJAG_04855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003677"],"is_obsolete":false,"name":"replication fork barrier binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031634","terms_by_termid":{"GO:0043110":null,"GO:0110035":null,"GO:1990943":null}}


id: MOD:01602
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue, and an L-methionine residue to S-(L-lysyl)-L-methionine sulfilimine.","definition_xrefs":["PubMed:15951440","RESID:AA0501","PubMed:19729652","PubMed:12011424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked L-lysine residue","termid":"MOD:02051"},{"relation_name":"is_a","term_name":"crosslinked L-methionine residue","termid":"MOD:02052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(L-lysyl)-L-methionine sulfilimine","synonyms":[{"name":"(2S)-2-amino-6-([(E)-[(3S)-3-amino-3-carboxypropyl](methyl)-lambda(4)-sulfanylidene]amino)hexanoic acid","type":"exact"},{"name":"(E)-N6-([(3S)-3-amino-3-carboxypropyl](methyl)-lambda(4)-sulfanylidene)-L-lysine","type":"exact"},{"name":"S-(L-lysyl)-L-methionine sulfilimine","type":"exact"},{"name":"S-lysyl-methionine","type":"exact"}],"termid":"MOD:01602"}


id: GO:0042420
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of dopamine, a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dopamine metabolic process","termid":"GO:0042417"},{"relation_name":"is_a","term_name":"catecholamine catabolic process","termid":"GO:0042424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dopamine catabolic process","secondary_identifiers":["Reactome:R-HSA-379397","Reactome:R-HSA-379398"],"synonyms":[{"name":"dopamine breakdown","type":"exact"},{"name":"dopamine catabolism","type":"exact"},{"name":"dopamine degradation","type":"exact"}],"termid":"GO:0042420"}


id: PBO:0001521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase type 2A (predicted)","termid":"PBO:0001521"}


id: PBO:0085201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Outer kinetochore protein required for accurate chromosome segregation; component of COMA (Ctf19p, Okp1p, Mcm21p, Ame1p) a kinetochore sub-complex which functions as a platform for kinetochore assembly; orthologous to human centromere constitutive-associated network (CCAN) subunit CENP-Q and fission yeast fta7","termid":"PBO:0085201"}


id: GO:0035147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Fusing of specific tracheal branches in an open tracheal system to branches from neighboring hemisegments to form a continuous tracheal network. Branch fusion is mediated by individual cells at the tip of each branch, which contact a similar cell and undergo a coordinated series of morphogenetic events that create a bicellular fusion joint.","definition_xrefs":["GOC:mtg_sensu","PMID:14570584"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube fusion","termid":"GO:0035146"},{"relation_name":"part_of","term_name":"branching involved in open tracheal system development","termid":"GO:0060446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"branch fusion, open tracheal system","synonyms":[{"name":"tracheal branch fusion","type":"exact"}],"termid":"GO:0035147"}


id: SO:0000824
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome originating in a macronucleus.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"macronuclear_sequence","termid":"SO:0000083"},{"relation_name":"is_a","term_name":"chromosome","termid":"SO:0000340"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macronuclear_chromosome","synonyms":[{"name":"macronuclear chromosome","type":"exact"}],"termid":"SO:0000824"}


id: GO:0009744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a sucrose stimulus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to disaccharide","termid":"GO:0034285"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to sucrose","synonyms":[{"name":"response to sucrose stimulus","type":"exact"}],"termid":"GO:0009744"}


id: MONDO:0000528
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0000528 (obsolete MONDO:0000528)","termid":"MONDO:0000528","xrefs":{"Monarch":{"xref_id":"0000528"}}}


id: PBO:0090293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylglycerol phosphate phosphatase Gep4","termid":"PBO:0090293"}


id: FYECO:0000188
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which pantothenate was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ pantothenate","termid":"FYECO:0000188"}


id: MONDO:0001593
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease that involves the rectum.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"large intestine disorder","termid":"MONDO:0024634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"rectal disorder","secondary_identifiers":["SCTID:5964004","MESH:D012002","EFO:0009685","UMLS:C0034882","MEDGEN:19701","DOID:1285","ICD9:569.49"],"synonyms":[{"name":"disease of rectum","type":"exact"},{"name":"disease or disorder of rectum","type":"exact"},{"name":"disorder of rectum","type":"exact"},{"name":"rectal disorder","type":"exact"},{"name":"rectum disease","type":"exact"},{"name":"rectum disease or disorder","type":"exact"}],"termid":"MONDO:0001593","xrefs":{"Monarch":{"xref_id":"0001593"}}}


id: MOD:00415
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod - OBSOLETE because Unimod entry 22 is now merged with entry 21 remap to MOD:00696 'phosphorylated residue'.","definition_xrefs":["PubMed:18688235"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00415 phosphorylation without neutral loss (obsolete MOD:00415)","termid":"MOD:00415"}


id: PBO:0081980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and SCAN domain containing 5B","termid":"PBO:0081980"}


id: PBO:0050702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family B (small) member 1","termid":"PBO:0050702"}


id: FYECO:0000180
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which sulfur was added to the medium or assay buffers in a limiting quantity compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping limited","termid":"FYECO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ limited sulfur","synonyms":[{"name":"limited sulphur added","type":"exact"}],"termid":"FYECO:0000180"}


id: MOD:00254
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-tyrosine residue and the 5'-end of RNA through a phosphodiester to form O4'-(phospho-5'-RNA)-L-tyrosine.","definition_xrefs":["PubMed:6264310","PubMed:217003","PubMed:1702164","PubMed:209034","RESID:AA0249"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleic acid linked residue","termid":"MOD:00751"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O4'-(phospho-5'-RNA)-L-tyrosine","synonyms":[{"name":"(S)-2-amino-3-[4-(5'-ribonucleic acid phosphonoxy)phenyl]propanoic acid","type":"exact"},{"name":"MOD_RES O-(5'-phospho-RNA)-tyrosine","type":"exact"},{"name":"O4'-(phospho-5'-RNA)-L-tyrosine","type":"exact"},{"name":"O4'-L-tyrosine 5'-RNA phosphodiester","type":"exact"}],"termid":"MOD:00254"}


id: GO:0046695
data:
  {"annotated_genes":["SJAG_04274","SJAG_02927"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[58587,64000],"is_not":false,"summary":null,"term":"GO:0046695"}]},"cv_name":"cellular_component","definition":"A SAGA-type histone acetyltransferase complex that contains a smaller form of Spt7 (lacking the SPT8 binding region) than the fungal SAGA complex, and consequently lacks Spt8. The complex is involved in the yeast retrograde response pathway, which is important for gene expression changes during mitochondrial dysfunction.","definition_xrefs":["PMID:33864814"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SAGA-type complex","termid":"GO:0070461"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02927":null,"SJAG_04274":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0032991","GO:0005694","GO:0005575"],"is_obsolete":false,"name":"SLIK (SAGA-like) complex","references_by_uniquename":{"GO_REF:0000002":null},"synonyms":[{"name":"SAGA (alt) complex","type":"exact"},{"name":"SALSA complex","type":"exact"},{"name":"SLIK/SALSA complex","type":"exact"}],"termid":"GO:0046695","terms_by_termid":{"GO:0046695":null}}


id: GO:0085021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the structure or function of its host organism, mediated by a substance secreted by a type I secretion system in the organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modification by symbiont of host morphology or physiology via protein secreted by type I secretion system (obsolete GO:0085021)","termid":"GO:0085021"}


id: PBO:0051335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2-36 (pseudogene)","termid":"PBO:0051335"}


id: PBO:0053175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late cornified envelope like proline rich 1","termid":"PBO:0053175"}


id: PBO:0109310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ligand of numb-protein X 2B, pseudogene","termid":"PBO:0109310"}


id: GO:0051655
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a vesicle is maintained in a specific location within a cell and prevented from moving elsewhere.","definition_xrefs":["GOC:tb","GOC:ai","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle localization","termid":"GO:0051648"},{"relation_name":"is_a","term_name":"maintenance of organelle location","termid":"GO:0051657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"maintenance of vesicle location","synonyms":[{"name":"maintenance of vesicle localization","type":"related"}],"termid":"GO:0051655"}


id: PBO:0111767
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PY motif","termid":"PBO:0111767"}


id: FYPO:0002108
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell is viable, and tapers at one end to a diameter smaller than the other. The cell diameter at the narrow end is smaller than that of a wild-type cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"tapered cell","termid":"FYPO:0000014"},{"relation_name":"has_part","term_name":"viable cell","termid":"FYPO:0000124"},{"relation_name":"is_a","term_name":"viable cell","termid":"FYPO:0000124"},{"relation_name":"is_a","term_name":"tapered vegetative cell","termid":"FYPO:0001119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000005","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"viable tapered cell","synonyms":[{"name":"viable bottle-shaped cell","type":"exact"},{"name":"viable bottle/skittle cell","type":"exact"},{"name":"viable skittle-shaped cell","type":"exact"}],"termid":"FYPO:0002108"}


id: PBO:0070239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 179 pseudogene","termid":"PBO:0070239"}


id: GO:0031905
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of an early endosome.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosome lumen","termid":"GO:0031904"},{"relation_name":"part_of","term_name":"early endosome","termid":"GO:0005769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005768","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"early endosome lumen","termid":"GO:0031905"}


id: MONDO:0011621
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acro-pectoral syndrome is characterized by a combination of distal limb abnormalities (syndactyly of all fingers and toes, preaxial polydactyly in the feet and/or hands) and upper sternum malformations. It has been described in 22 patients from a six-generation Turkish family. It is transmitted as an autosomal dominant trait and the causative gene is located at 7q36.","definition_xrefs":["Orphanet:85203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"},{"relation_name":"is_a","term_name":"polydactyly-syndactyly-triphalangism","termid":"MONDO:0800066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acropectoral syndrome","secondary_identifiers":["GARD:8485","icd11.foundation:1060723089","MESH:C535664","OMIM:605967","UMLS:C1853812","MEDGEN:342975","SCTID:720412009"],"synonyms":[{"name":"ACRP syndrome","type":"exact"},{"name":"ACRPS","type":"related"},{"name":"Dundar Acropectoral syndrome","type":"related"},{"name":"acro-pectoral syndrome","type":"related"},{"name":"acropectoral syndrome","type":"exact"},{"name":"syndactyly, preaxial polydactyly and sternal deformity","type":"related"},{"name":"syndactyly, preaxial polydactyly, and sternal deformity","type":"related"},{"name":"syndactyly-preaxial polydactyly-sternal deformity syndrome","type":"exact"}],"termid":"MONDO:0011621","xrefs":{"Monarch":{"xref_id":"0011621"}}}


id: PBO:0064179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group XF, pseudogene","termid":"PBO:0064179"}


id: PBO:0116280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative scramblase involved in ESCRT-III-dependent membrane remodeling; localizes to the endosome and vacuolar membrane; predicted to contain eleven transmembrane helices; synergistic defect with VPS55 and VPS68 in the sorting of MVB cargo proteins; interacts physically with ESCRT-III subunits; conserved member of the SERINC (serine incorporator) protein family","termid":"PBO:0116280"}


id: GO:1904800
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of neuron remodeling.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:21609829"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neuron maturation","termid":"GO:0014043"},{"relation_name":"is_a","term_name":"regulation of neuron remodeling","termid":"GO:1904799"},{"relation_name":"negatively_regulates","term_name":"neuron remodeling","termid":"GO:0016322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neuron remodeling","synonyms":[{"name":"down regulation of axon pruning","type":"narrow"},{"name":"down regulation of neuron remodeling","type":"exact"},{"name":"down regulation of neuronal remodeling","type":"exact"},{"name":"down-regulation of axon pruning","type":"narrow"},{"name":"down-regulation of neuron remodeling","type":"exact"},{"name":"down-regulation of neuronal remodeling","type":"exact"},{"name":"downregulation of axon pruning","type":"narrow"},{"name":"downregulation of neuron remodeling","type":"exact"},{"name":"downregulation of neuronal remodeling","type":"exact"},{"name":"inhibition of axon pruning","type":"narrow"},{"name":"inhibition of neuron remodeling","type":"narrow"},{"name":"inhibition of neuronal remodeling","type":"narrow"},{"name":"negative regulation of axon pruning","type":"narrow"},{"name":"negative regulation of neuron remodelling","type":"exact"},{"name":"negative regulation of neuronal remodeling","type":"exact"}],"termid":"GO:1904800"}


id: GO:1901785
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of p-cresol.","definition_xrefs":["UniPathway:UPA00708","GOC:TermGenie","GOC:yaf","PMID:10623531"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cresol catabolic process","termid":"GO:0046199"},{"relation_name":"is_a","term_name":"p-cresol metabolic process","termid":"GO:1901784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"p-cresol catabolic process","synonyms":[{"name":"p-cresol breakdown","type":"exact"},{"name":"p-cresol catabolism","type":"exact"},{"name":"p-cresol degradation","type":"exact"}],"termid":"GO:1901785"}


id: GO:0051276
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id: GO:0090642
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id: PBO:0081055
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCHC-type containing 12","termid":"PBO:0081055"}


id: FYPO:0004903
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more cell separation after cytokinesis RNAs measured in a cell is lower than normal (i.e. lower than observed in wild-type cells). Cell separation after cytokinesis RNAs are transcribed from genes whose products are involved in cell separation after cytokinesis.","definition_xrefs":["PMID:25530312","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"decreased level of cell separation after cytokinesis gene mRNA during vegetative growth","synonyms":[{"name":"decreased cell separation after cytokinesis gene mRNA accumulation during vegetative growth","type":"related"},{"name":"decreased level of cell separation after cytokinesis gene RNA during vegetative growth","type":"exact"},{"name":"decreased level of cell separation after cytokinesis gene mRNA during mitotic cell cycle","type":"related"},{"name":"decreased level of cell separation after cytokinesis gene transcripts during vegetative growth","type":"exact"},{"name":"decreased level of cytokinetic cell separation gene mRNA during vegetative growth","type":"related"},{"name":"reduced level of cell separation after cytokinesis gene mRNA during vegetative growth","type":"exact"}],"termid":"FYPO:0004903"}


id: GO:0140056
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id: PBO:0077237
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMCC2 antisense RNA 1","termid":"PBO:0077237"}


id: MONDO:0010987
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive nonsyndromic deafness that has material basis in mutation in the TMPRSS3 gene on chromosome 21q22.","definition_xrefs":["PMID:11137999","DOID:0110527"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 8","secondary_identifiers":["OMIM:601072","UMLS:C1832827","MEDGEN:322046","GARD:22589"],"synonyms":[{"name":"DFNB10","type":"narrow"},{"name":"DFNB8","type":"narrow"},{"name":"NRSD8","type":"narrow"},{"name":"autosomal recessive deafness 10","type":"narrow"},{"name":"autosomal recessive deafness 8","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 8","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 8","type":"narrow"},{"name":"autosomal recessive nonsyndromic hearing loss 8","type":"exact"},{"name":"childhood-onset neurosensory autosomal recessive deafness 8","type":"narrow"},{"name":"deafness, autosomal recessive 10","type":"narrow"},{"name":"deafness, autosomal recessive 8","type":"narrow"},{"name":"deafness, autosomal recessive 8/10","type":"narrow"},{"name":"deafness, autosomal recessive type 8","type":"narrow"},{"name":"deafness, childhood-onset neurosensory, autosomal recessive 8","type":"narrow"},{"name":"neurosensory nonsyndromic recessive deafness 8","type":"narrow"}],"termid":"MONDO:0010987","xrefs":{"Monarch":{"xref_id":"0010987"}}}


id: PR:Q9Y7Q0
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC191.06 gene.","definition_xrefs":["UniProtKB:Q9Y7Q0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C191.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC191.06","synonyms":[{"name":"Spom972h-SPCC191.06","type":"exact"}],"termid":"PR:Q9Y7Q0"}


id: PBO:0052186
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium two pore domain channel subfamily K member 18","termid":"PBO:0052186"}


id: PBO:0079862
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UNC homeobox","termid":"PBO:0079862"}


id: PATO:0000839
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  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000839 relative auditory ability value (obsolete PATO:0000839)","termid":"PATO:0000839"}


id: PR:Q9C0Y8
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAPB24D3.06c gene.","definition_xrefs":["UniProtKB:Q9C0Y8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0613 protein PB24D3.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB24D3.06c","synonyms":[{"name":"Spom972h-SPAPB24D3.06c","type":"exact"}],"termid":"PR:Q9C0Y8"}


id: PBO:0056729
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id: PBO:0043664
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coenzyme Q8A","termid":"PBO:0043664"}


id: PBO:0042114
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 186","termid":"PBO:0042114"}


id: PBO:0090864
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"candidate S. pombe SPAC664.13 ortholog, syntenic position, intrinsically disordered protein","termid":"PBO:0090864"}


id: PR:P25457
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 60S ribosomal protein L7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11524:SF5","PRO:DNx","OMA:SCHPO01432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L7-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H5.07","secondary_identifiers":["UniProtKB:P25457"],"synonyms":[{"name":"Spom972h-RPL7","type":"exact"}],"termid":"PR:P25457"}


id: GO:0009301
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis of small nuclear RNA (snRNA) from a DNA template.","definition_xrefs":["GOC:jl","ISBN:0321000382"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription","termid":"GO:0006351"},{"relation_name":"is_a","term_name":"snRNA metabolic process","termid":"GO:0016073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0016073"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0016073","GO:0006351","GO:0010467"],"is_obsolete":false,"name":"snRNA transcription","termid":"GO:0009301"}


id: PBO:0002758
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal protein, with meiosis specific splicing","termid":"PBO:0002758"}


id: PBO:0081940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger HIT-type containing 3","termid":"PBO:0081940"}


id: RO:0002457
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  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"trophically_interacts_with","termid":"RO:0002438"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acquires_nutrients_from","termid":"RO:0002457"}


id: GO:2000792
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mesenchymal cell proliferation involved in lung development.","definition_xrefs":["PMID:21513708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mesenchymal cell proliferation","termid":"GO:0002053"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of mesenchymal cell proliferation involved in lung development","termid":"GO:2000790"},{"relation_name":"positively_regulates","term_name":"mesenchymal cell proliferation involved in lung development","termid":"GO:0060916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mesenchymal cell proliferation involved in lung development","termid":"GO:2000792"}


id: MONDO:0004572
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An affective disorder characterized by periods of depression and hypomania. These may be separated by periods of normal mood.","definition_xrefs":["MESH:D003527"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"bipolar disorder","termid":"MONDO:0004985"},{"relation_name":"is_a","term_name":"mood disorder","termid":"MONDO:0005371"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclothymic disorder","secondary_identifiers":["DOID:845","ICD9:301.1","ICD9:301.10","ICD9:301.13","MEDGEN:1198","UMLS:C0010598","SCTID:76105009","ICD10CM:F34.0","icd11.foundation:1427638883"],"synonyms":[{"name":"affective personality disorder","type":"exact"},{"name":"cycloid personality","type":"exact"},{"name":"cyclothymia","type":"exact"},{"name":"cyclothymic personality","type":"exact"}],"termid":"MONDO:0004572","xrefs":{"Monarch":{"xref_id":"0004572"}}}


id: PBO:0065164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich basic protein 1","termid":"PBO:0065164"}


id: PBO:0029868
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K56_acetylation_at_centromere_outer_repeat","termid":"PBO:0029868"}


id: PBO:0072139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 16","termid":"PBO:0072139"}


id: PBO:0088343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial phosphatidic acid transfer protein Ups1","termid":"PBO:0088343"}


id: GO:0098571
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side (leaflet) of the plastid thylakoid membrane that faces the lumen, and any proteins embedded in it or loosely bound to its surface.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"side of membrane","termid":"GO:0098552"},{"relation_name":"part_of","term_name":"plastid thylakoid membrane","termid":"GO:0055035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"lumenal side of plastid thylakoid membrane","termid":"GO:0098571"}


id: GO:0019336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a phenol, any compound containing one or more hydroxyl groups directly attached to an aromatic carbon ring.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phenol-containing compound catabolic process","secondary_identifiers":["MetaCyc:PHENOLDEG-PWY"],"synonyms":[{"name":"phenol-containing compound breakdown","type":"exact"},{"name":"phenol-containing compound catabolism","type":"exact"},{"name":"phenol-containing compound degradation","type":"exact"}],"termid":"GO:0019336"}


id: FYPO:0006712
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of acetyl-CoA measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular acetyl-CoA level","synonyms":[{"name":"decreased cellular acetyl-CoA level during mitotic cell cycle","type":"related"},{"name":"decreased cellular acetyl-CoA level during vegetative growth","type":"exact"},{"name":"reduced cellular acetyl-CoA level","type":"exact"}],"termid":"FYPO:0006712"}


id: MONDO:0032663
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"genetic developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 70","secondary_identifiers":["GARD:16336","DOID:0112206","MEDGEN:1648407","OMIM:618298","UMLS:C4749023"],"synonyms":[{"name":"DEE70","type":"exact"},{"name":"EIEE70","type":"exact"},{"name":"EPILEPTIC ENCEPHALOPATHY, EARLY INFANTILE, 70","type":"exact"},{"name":"developmental and epileptic encephalopathy 70","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 70","type":"exact"}],"termid":"MONDO:0032663","xrefs":{"Monarch":{"xref_id":"0032663"}}}


id: GO:0015487
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: melibiose(out) + monovalent cation(out) = melibiose(in) + monovalent cation(in).","definition_xrefs":["TC:2.A.2.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate:monoatomic cation symporter activity","termid":"GO:0005402"},{"relation_name":"is_a","term_name":"melibiose transmembrane transporter activity","termid":"GO:0015156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"melibiose:monoatomic cation symporter activity","synonyms":[{"name":"melibiose permease activity","type":"related"},{"name":"melibiose:cation symporter activity","type":"broad"},{"name":"melibiose:monovalent cation symporter activity","type":"exact"}],"termid":"GO:0015487"}


id: GO:2000372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of DNA topoisomerase (ATP-hydrolyzing) activity.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of DNA topoisomerase (ATP-hydrolyzing) activity (obsolete GO:2000372)","synonyms":[{"name":"negative regulation of DNA topoisomerase (ATP-hydrolysing)","type":"related"},{"name":"negative regulation of DNA topoisomerase II","type":"related"},{"name":"negative regulation of DNA topoisomerase IV activity","type":"exact"},{"name":"negative regulation of DNA topoisomerase type II activity","type":"exact"},{"name":"negative regulation of deoxyribonucleate topoisomerase","type":"related"},{"name":"negative regulation of deoxyribonucleic topoisomerase activity","type":"exact"},{"name":"negative regulation of topoisomerase","type":"related"},{"name":"negative regulation of topoisomerase II","type":"exact"},{"name":"negative regulation of type II DNA topoisomerase activity","type":"exact"}],"termid":"GO:2000372"}


id: MONDO:0012359
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of combined T and B cell immunodeficiency (CID) characterized by severe and persistent cytomegalovirus (CMV) infection and autoimmune cytopenia.","definition_xrefs":["Orphanet:231154"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"non-SCID combined immunodeficiency","termid":"MONDO:0018814"},{"relation_name":"is_a","term_name":"T-B- severe combined immunodeficiency","termid":"MONDO:0017855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"combined immunodeficiency due to partial RAG1 deficiency","secondary_identifiers":["MESH:C563691","MEDGEN:372161","SCTID:725290000","GARD:13712","OMIM:609889","UMLS:C1835931"],"synonyms":[{"name":"CID due to partial RAG1 deficiency","type":"exact"},{"name":"CID with expansion of gamma delta T cells","type":"exact"},{"name":"alpha/beta T-cell lymphopenia with gamma/DELTA T-cell expansion, severe CYTOMEGALOVIRUS infection, and autoimmunity","type":"related"},{"name":"combined immunodeficiency with expansion of gamma delta T cells","type":"exact"}],"termid":"MONDO:0012359","xrefs":{"Monarch":{"xref_id":"0012359"}}}


id: GO:0003691
data:
  {"annotated_genes":["SJAG_01777","SJAG_02212","SJAG_01677"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75864,81971,91586],"is_not":false,"summary":null,"term":"GO:0003691"}]},"cv_name":"molecular_function","definition":"Binding to double-stranded telomere-associated DNA.","definition_xrefs":["GOC:jl","ISBN:0321000382"],"direct_ancestors":[{"relation_name":"is_a","term_name":"double-stranded DNA binding","termid":"GO:0003690"},{"relation_name":"is_a","term_name":"telomeric DNA binding","termid":"GO:0042162"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01677":null,"SJAG_01777":null,"SJAG_02212":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0003677","GO:0005488"],"is_obsolete":false,"name":"double-stranded telomeric DNA binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0003691","terms_by_termid":{"GO:0003691":null}}


id: GO:1990612
data:
  {"annotated_genes":["SJAG_05196","SJAG_01538"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[98529,104639],"is_not":false,"summary":null,"term":"GO:1990612"}]},"cv_name":"cellular_component","definition":"A LINC complex implicated in the connection of DNA double strand breaks to the cytoskeleton during DNA double-strand break repair.","definition_xrefs":["PMID:24947240","PMID:24943839","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic nuclear membrane microtubule tethering complex","termid":"GO:0034993"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01538":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"Sad1-Kms1 LINC complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990612","terms_by_termid":{"GO:1990612":null}}


id: GO:0021843
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directional movement of tangentially migrating interneurons that are not guided by attaching to extracellular substrates.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:dph","GOC:jid","PMID:12626695","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substrate-independent telencephalic tangential migration","termid":"GO:0021826"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"substrate-independent telencephalic tangential interneuron migration","termid":"GO:0021843"}


id: PBO:0046130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4H","termid":"PBO:0046130"}


id: MOD:00255
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-histidine residue and an L-tyrosine residue by a carbon-nitrogen bond to form 3-(3'-L-histidyl)-L-tyrosine.","definition_xrefs":["PubMed:9144772","RESID:AA0250"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uncategorized crosslinked residues","termid":"MOD:00692"},{"relation_name":"is_a","term_name":"crosslinked L-histidine residue","termid":"MOD:02048"},{"relation_name":"is_a","term_name":"crosslinked L-tyrosine residue","termid":"MOD:02058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-(3'-L-histidyl)-L-tyrosine","synonyms":[{"name":"(2S,3R)-2-amino-3-(5-[(2S)-2-amino-2-carboxyethyl]-1H-imidazol-1-yl)-3-(4-hydroxyphenyl)propanoic acid","type":"exact"},{"name":"3-(3'-L-histidyl)-L-tyrosine","type":"exact"},{"name":"3-(N3'-histidyl)tyrosine","type":"exact"},{"name":"3-(pi-histidyl)tyrosine","type":"exact"},{"name":"3-(pros-histidyl)tyrosine","type":"exact"},{"name":"CROSSLNK 3'-histidyl-3-tyrosine (His-Tyr)","type":"exact"},{"name":"beta-(N(delta)-histidyl)tyrosine","type":"exact"},{"name":"beta-(N3'-histidyl)tyrosine","type":"exact"}],"termid":"MOD:00255"}


id: GO:0090673
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The binding of an endothelial cell to the extracellular matrix via adhesion molecules.","definition_xrefs":["GOC:BHF","GOC:bc","GOC:BHF_miRNA","PMID:19460962"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-matrix adhesion","termid":"GO:0007160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"endothelial cell-matrix adhesion","termid":"GO:0090673"}


id: GO:0019988
data:
  {"annotated_genes":["SJAG_05228"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72997],"is_not":false,"summary":null,"term":"GO:0019988"}]},"cv_name":"biological_process","definition":"The covalent alteration of an amino acid charged on a tRNA before it is incorporated into a protein, as in N-formylmethionine, selenocysteine or pyrrolysine.","definition_xrefs":["GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA modification","termid":"GO:0006400"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05228":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006399","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"charged-tRNA amino acid modification","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0030630"],"synonyms":[{"name":"charged tRNA amino acid modification","type":"exact"},{"name":"charged tRNA modification","type":"exact"},{"name":"charged-tRNA modification","type":"related"},{"name":"pre-translational amino acid modification","type":"exact"},{"name":"pre-translational protein modification","type":"exact"},{"name":"pretranslation protein modification","type":"exact"},{"name":"pretranslational amino acid modification","type":"exact"}],"termid":"GO:0019988","terms_by_termid":{"GO:0019988":null}}


id: MONDO:0007617
data:
  {"annotated_genes":["SJAG_02254"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87763],"is_not":false,"summary":null,"term":"MONDO:0007617"}]},"cv_name":"mondo","definition":"Any Coffin-Siris syndrome in which the cause of the disease is a mutation in the ARID1B gene.","definition_xrefs":["MONDO:patterns/OMIM_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"Coffin-Siris syndrome","termid":"MONDO:0015452"},{"relation_name":"is_a","term_name":"BAFopathy","termid":"MONDO:0700120"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02254":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Coffin-Siris syndrome 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:614562","MEDGEN:482831","GARD:15072","DOID:0070042","OMIM:135900","MESH:C538391","UMLS:C3281201","OMIM:609943"],"synonyms":[{"name":"ARID1B-related BAFopathy","type":"exact"},{"name":"COFFIN-SIRIS syndrome","type":"related"},{"name":"COFFIN-SIRIS syndrome 1","type":"exact"},{"name":"CSS","type":"related"},{"name":"CSS1","type":"exact"},{"name":"Coffin-Siris syndrome 1","type":"exact"},{"name":"MRD12","type":"exact"},{"name":"autosomal dominant mental retardation 12","type":"exact"},{"name":"fifth digit syndrome","type":"broad"},{"name":"hypertrichosis, hyperkeratosis, intellectual disability, and distinctive facial features","type":"exact"},{"name":"hypertrichosis, hyperkeratosis, mental retardation, and distinctive facial features","type":"exact"},{"name":"intellectual disability, autosomal dominant 12","type":"exact"},{"name":"mental retardation, autosomal dominant 12","type":"related"},{"name":"mental retardation, autosomal dominant type 12","type":"exact"}],"termid":"MONDO:0007617","terms_by_termid":{"MONDO:0007617":null},"xrefs":{"Monarch":{"xref_id":"0007617"}}}


id: MONDO:0043137
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"microcephaly","termid":"MONDO:0001149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"isolated microcephaly","secondary_identifiers":["UMLS:C2931527","MEDGEN:419828","MESH:C537542"],"synonyms":[{"name":"Nonsyndromal microcephaly","type":"related"},{"name":"microcephaly, non-syndromic","type":"related"},{"name":"nonsyndromic microcephaly","type":"related"}],"termid":"MONDO:0043137","xrefs":{"Monarch":{"xref_id":"0043137"}}}


id: MONDO:0006560
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Reduced sweating. Causes include burns, dehydration, radiation, and leprosy.","definition_xrefs":["NCIT:P378"],"gene_count":0,"genotype_count":0,"name":"obsolete hypohidrosis (obsolete MONDO:0006560)","secondary_identifiers":["MESH:D007007","SCTID:45004005","Wikipedia:Hypodidrosis","DOID:11155","HP:0000966","ICD10CM:L74.4"],"synonyms":[{"name":"Oligohidrosis","type":"exact"}],"termid":"MONDO:0006560","xrefs":{"Monarch":{"xref_id":"0006560"}}}


id: PBO:0029504
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vegetative_cell_population_after_spore_germination,_elongated_germ_tubes_(obsolete_FYPO:0002211)","termid":"PBO:0029504"}


id: PBO:0058887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 10524","termid":"PBO:0058887"}


id: GO:0035681
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to toll-like receptor 15.","definition_xrefs":["GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface toll-like receptor signaling pathway","termid":"GO:0140895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"toll-like receptor 15 signaling pathway","synonyms":[{"name":"TLR15 signaling pathway","type":"exact"},{"name":"toll-like receptor 15 signalling pathway","type":"exact"}],"termid":"GO:0035681"}


id: GO:0071301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vitamin B1 stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to vitamin B1","termid":"GO:0010266"},{"relation_name":"is_a","term_name":"cellular response to vitamin","termid":"GO:0071295"},{"relation_name":"is_a","term_name":"cellular response to alcohol","termid":"GO:0097306"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to vitamin B1","synonyms":[{"name":"cellular response to thiamin","type":"exact"},{"name":"cellular response to thiamine","type":"exact"}],"termid":"GO:0071301"}


id: PBO:0026701
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_population_growth_on_glutamine_nitrogen_source","termid":"PBO:0026701"}


id: MONDO:0019086
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Esophageal carcinoma (EC) is a tumor arising in the epithelial cells lining the esophagus and can be divided into two subtypes: esophageal squamous cell carcinoma (ESCC) and esophageal adenocarcinoma (EAC).","definition_xrefs":["Orphanet:70482"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system carcinoma","termid":"MONDO:0006181"},{"relation_name":"is_a","term_name":"esophageal cancer","termid":"MONDO:0007576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"carcinoma of esophagus","secondary_identifiers":["MedDRA:10030155","UMLS:C0152018","GARD:6383","SCTID:372138000","DOID:1107","EFO:0002916","MEDGEN:56256","NCIT:C3513"],"synonyms":[{"name":"Esophageal cancer","type":"exact"},{"name":"cancer of esophagus","type":"narrow"},{"name":"cancer of oesophagus","type":"narrow"},{"name":"cancer of the esophagus","type":"narrow"},{"name":"cancer of the oesophagus","type":"narrow"},{"name":"carcinoma of esophagus","type":"exact"},{"name":"carcinoma of the esophagus","type":"exact"},{"name":"carcinoma of the oesophagus","type":"exact"},{"name":"esophageal cancer","type":"narrow"},{"name":"esophageal cancer, NOS","type":"narrow"},{"name":"esophageal carcinoma","type":"exact"},{"name":"esophagus carcinoma","type":"exact"},{"name":"oesophagus carcinoma","type":"exact"}],"termid":"MONDO:0019086","xrefs":{"Monarch":{"xref_id":"0019086"}}}


id: PBO:0119669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein regulatory complex subunit 8","termid":"PBO:0119669"}


id: PBO:0029796
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_actin_cable_retrograde_transport","termid":"PBO:0029796"}


id: PBO:0000608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2c homolog 3","termid":"PBO:0000608"}


id: MONDO:0002594
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infection that is caused by an Orthopoxvirus, which is transmitted by primates or rodents, and which is characterized by a prodromal syndrome of fever, chills, headache, myalgia, and lymphedema; initial symptoms are followed by a generalized papular rash that typically progresses from vesiculation through crusting over the course of two weeks.","definition_xrefs":["NCIT:C128421"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary viral infectious disease","termid":"MONDO:0100329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monkeypox","secondary_identifiers":["ICD10CM:B04","MESH:D045908","ICD9:059.01","SCTID:359814004","MEDGEN:124442","UMLS:C0276180","DOID:3292","ICD9:136.8"],"synonyms":[{"name":"Monkeypox virus infection","type":"exact"},{"name":"infections, Monkeypox virus","type":"related"}],"termid":"MONDO:0002594","xrefs":{"Monarch":{"xref_id":"0002594"}}}


id: PBO:0090552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator complex subunit Elp5","termid":"PBO:0090552"}


id: GO:2001056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of cysteine-type endopeptidase activity.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cysteine-type endopeptidase activity (obsolete GO:2001056)","synonyms":[{"name":"positive regulation of lysosomal cysteine-type endopeptidase","type":"related"},{"name":"positive regulation of thiol endopeptidase activity","type":"exact"}],"termid":"GO:2001056"}


id: GO:0032095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a response to a food stimulus.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to nutrient levels","termid":"GO:0032107"},{"relation_name":"regulates","term_name":"response to food","termid":"GO:0032094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to food","termid":"GO:0032095"}


id: PR:O74346
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- map4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74346"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P cell-type agglutination protein map4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21D10.06c","synonyms":[{"name":"Spom972h-map4","type":"exact"}],"termid":"PR:O74346"}


id: PBO:0072236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 11","termid":"PBO:0072236"}


id: PBO:0005491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADP-specific glutamate dehydrogenase Gdh1 (predicted)","termid":"PBO:0005491"}


id: FYPO:0001345
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which DNA recombination is abnormal in the vegetative growth phase of the life cycle. DNA recombination is a process that results in reassortment of genes, producing gene combinations different from those that were present in the parents.","definition_xrefs":["GO:0006310","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA recombination","termid":"FYPO:0000063"},{"relation_name":"is_a","term_name":"DNA metabolism phenotype during vegetative growth","termid":"FYPO:0001346"},{"relation_name":"is_a","term_name":"abnormal metabolic process during vegetative growth","termid":"FYPO:0001363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal DNA recombination during vegetative growth","synonyms":[{"name":"abnormal DNA recombination during mitotic cell cycle","type":"related"},{"name":"abnormal recombination during vegetative growth","type":"exact"},{"name":"recombination defects during vegetative growth","type":"exact"}],"termid":"FYPO:0001345"}


id: GO:0003068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulation of blood pressure mediated by acetylcholine signaling. Acetylcholine is an acetic acid ester of the organic base choline and functions as a neurotransmitter.","definition_xrefs":["GOC:mtg_cardio","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure by neurotransmitter","termid":"GO:0003070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by acetylcholine","synonyms":[{"name":"blood pressure regulation by acetylcholine","type":"exact"}],"termid":"GO:0003068"}


id: PBO:0079829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBAP1-MVB12-associated (UMA) domain containing 1","termid":"PBO:0079829"}


id: GO:0120213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of histidine biosynthetic process.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"is_a","term_name":"regulation of amino acid biosynthetic process","termid":"GO:2000282"},{"relation_name":"regulates","term_name":"L-histidine biosynthetic process","termid":"GO:0000105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"regulation of histidine biosynthetic process","synonyms":[{"name":"regulation of histidine anabolism","type":"exact"},{"name":"regulation of histidine biosynthesis","type":"exact"},{"name":"regulation of histidine formation","type":"exact"},{"name":"regulation of histidine synthesis","type":"exact"}],"termid":"GO:0120213"}


id: PBO:0053222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat LGI family member 2","termid":"PBO:0053222"}


id: MONDO:0005421
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete infantile hypertrophic pyloric stenosis (obsolete MONDO:0005421)","termid":"MONDO:0005421","xrefs":{"Monarch":{"xref_id":"0005421"}}}


id: GO:0035519
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein ubiquitination process in which a polymer of ubiquitin, formed by linkages between lysine residues at position 29 of the ubiquitin monomers, is added to a protein. K29-linked ubiquitination targets the substrate protein for degradation.","definition_xrefs":["PMID:17028573"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein polyubiquitination","termid":"GO:0000209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"protein K29-linked ubiquitination","synonyms":[{"name":"protein K29-linked polyubiquitination","type":"exact"}],"termid":"GO:0035519"}


id: PBO:0004453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone acetyltransferase complex subunit Nto1 (predicted)","termid":"PBO:0004453"}


id: MONDO:0003773
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cystic meningioma that grows within the cerebral hemispheres.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral meningioma","termid":"MONDO:0003772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"intracerebral cystic meningioma","secondary_identifiers":["MEDGEN:272767","UMLS:C1334236","NCIT:C5269","DOID:6113"],"termid":"MONDO:0003773","xrefs":{"Monarch":{"xref_id":"0003773"}}}


id: MONDO:0700110
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"infectious disease, non-human animal","termid":"MONDO:0700049"},{"relation_name":"is_a","term_name":"respiratory system disorder, non-human animal","termid":"MONDO:0700104"},{"relation_name":"is_a","term_name":"inflammatory disease, non-human animal","termid":"MONDO:1011327"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pneumonia, non-human animal","termid":"MONDO:0700110","xrefs":{"Monarch":{"xref_id":"0700110"}}}


id: SO:0001959
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A cis-regulatory element, conserved sequence YYC+1TTTYY, and spans -2 to +6 relative to +1 TSS. It is present in most ribosomal protein genes in Drosophila and mammals but not in the yeast Saccharomyces cerevisiae. Resembles the initiator (TCAKTY in Drosophila) but functionally distinct from initiator.","definition_xrefs":["PMID:20801935","SO:myl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"core_eukaryotic_promoter_element","termid":"SO:0001660"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TCT_motif","synonyms":[{"name":"TCT element","type":"exact"},{"name":"polypyrimidine initiator","type":"exact"}],"termid":"SO:0001959"}


id: GO:0044543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process which begins with venom being forced into an organism by the bite or sting of another organism, and ends with the proteolytic processing of an inactive enzyme to an active form.","definition_xrefs":["GOC:jl","GOC:fj"],"gene_count":0,"genotype_count":0,"name":"obsolete envenomation resulting in zymogen activation in another organism (obsolete GO:0044543)","synonyms":[{"name":"envenomation resulting in zymogen activation in other organism","type":"exact"}],"termid":"GO:0044543"}


id: PBO:0002998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HHE domain cation binding protein (predicted)","termid":"PBO:0002998"}


id: PBO:0072730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingosine-1-phosphate receptor 1","termid":"PBO:0072730"}


id: PBO:0059295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L45 pseudogene 1","termid":"PBO:0059295"}


id: PBO:0079855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-93 homolog B4 (pseudogene)","termid":"PBO:0079855"}


id: GO:1901016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of potassium ion transmembrane transporter activity.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monoatomic ion transmembrane transporter activity","termid":"GO:0032412"},{"relation_name":"is_a","term_name":"regulation of potassium ion transmembrane transport","termid":"GO:1901379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of potassium ion transmembrane transporter activity","synonyms":[{"name":"regulation of potassium transporter activity","type":"exact"}],"termid":"GO:1901016"}


id: PBO:0073405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET pseudogene 8","termid":"PBO:0073405"}


id: PBO:0011135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER associated protein disulfide isomerase Pdi2","termid":"PBO:0011135"}


id: GO:0140622
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Lipid transfer complex that is responsible for the non-vesicular transport of phospholipids, such as phosphatidylserine, from the endoplasmic reticulum to the endosome. It resides in the endosomal (acceptor) membrane and binds to specific lipids on the donor membrane at the ER-endosome contact site.","definition_xrefs":["GOC:lnp","PMID:20016005","PMID:24366873"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"endosome membrane","termid":"GO:0010008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0005768","GO:0031410","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"ER-to-endosome phospholipid transfer complex","termid":"GO:0140622"}


id: MONDO:0001410
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the vagina due to thinning of the vaginal wall and decreased lubrication associated with reduced estrogen levels at menopause.","definition_xrefs":["MESH:D059268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vaginitis","termid":"MONDO:0002234"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"postmenopausal atrophic vaginitis","secondary_identifiers":["DOID:11968","ICD10CM:N95.2","MEDGEN:510282","ICD9:627.3","SCTID:52441000","UMLS:C0156409","icd11.foundation:1876048433"],"synonyms":[{"name":"atrophic vaginitis","type":"exact"},{"name":"senile vaginitis","type":"exact"}],"termid":"MONDO:0001410","xrefs":{"Monarch":{"xref_id":"0001410"}}}


id: FYPO:0004364
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a dioxygenase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0000661","FYPO:0000654","FYPO:0001985"],"is_obsolete":false,"name":"abnormal dioxygenase activity","termid":"FYPO:0004364"}


id: MONDO:0005627
data:
  {"annotated_genes":["SJAG_03677"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88982],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014937"}]},"cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm affecting the head and neck. Representative examples include oral cavity squamous cell carcinoma, laryngeal squamous cell carcinoma, and salivary gland carcinoma.","definition_xrefs":["NCIT:C4013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cancer","termid":"MONDO:0004992"},{"relation_name":"is_a","term_name":"head and neck neoplasm","termid":"MONDO:0005586"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03677":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"head and neck cancer","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0278996","MEDGEN:78920","DOID:11934","EFO:0006859"],"synonyms":[{"name":"cancer of craniocervical region","type":"exact"},{"name":"cancer of head and neck","type":"exact"},{"name":"cancer of the head and neck","type":"exact"},{"name":"craniocervical region cancer","type":"exact"},{"name":"head and neck cancer","type":"exact"},{"name":"head and neck malignant neoplasia","type":"exact"},{"name":"head and neck neoplasm","type":"broad"},{"name":"head and neck tumors","type":"broad"},{"name":"head and neck tumours","type":"broad"},{"name":"head/neck neoplasm","type":"broad"},{"name":"malignant craniocervical region neoplasm","type":"exact"},{"name":"malignant head and neck neoplasm","type":"exact"},{"name":"malignant head and neck tumor","type":"exact"},{"name":"malignant head and neck tumour","type":"exact"},{"name":"malignant neoplasm of craniocervical region","type":"exact"},{"name":"malignant neoplasm of head and neck","type":"exact"},{"name":"malignant neoplasm of the head and neck","type":"exact"},{"name":"malignant tumor of head and neck","type":"exact"},{"name":"malignant tumor of the head and neck","type":"exact"},{"name":"malignant tumour of head and neck","type":"exact"},{"name":"malignant tumour of the head and neck","type":"exact"},{"name":"tumour of head and neck","type":"broad"}],"termid":"MONDO:0005627","terms_by_termid":{"MONDO:0014937":null},"xrefs":{"Monarch":{"xref_id":"0005627"}}}


