# terms

id: GO:0071345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytokine stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to cytokine stimulus","secondary_identifiers":["Reactome:R-HSA-9007892","Reactome:R-HSA-9008059"],"termid":"GO:0071345"}


id: PBO:0017036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug98","termid":"PBO:0017036"}


id: GO:0061828
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Actin-based structures involved in establishing close contact between mature spermatids and Sertoli cells at the luminal end of the Sertoli cell.","definition_xrefs":["PMID:22510523","PMID:20403871"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tubulobulbar complex","termid":"GO:0036284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"apical tubulobulbar complex","synonyms":[{"name":"apical TBC","type":"exact"}],"termid":"GO:0061828"}


id: PBO:0076407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 4b","termid":"PBO:0076407"}


id: PR:P27574
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pyp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P27574"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine-protein phosphatase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26F1.10c","synonyms":[{"name":"PTPase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-pyp1","type":"exact"},{"name":"protein-tyrosine phosphatase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P27574"}


id: PBO:0036112
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K4_acetylation_during_vegetative_growth","termid":"PBO:0036112"}


id: PBO:0076612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 30","termid":"PBO:0076612"}


id: PBO:0070108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 22 pseudogene","termid":"PBO:0070108"}


id: GO:0071331
data:
  {"annotated_genes":["SJAG_02444","SJAG_04312","SJAG_03081","SJAG_00574","SJAG_00472","SJAG_04026","SJAG_01754","SJAG_01699","SJAG_01254"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117395,96038,108330,110856,118425,111367,108680,103668,107734],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010619"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hexose stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hexose","termid":"GO:0009746"},{"relation_name":"is_a","term_name":"cellular response to monosaccharide stimulus","termid":"GO:0071326"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00472":null,"SJAG_00574":null,"SJAG_01254":null,"SJAG_01699":null,"SJAG_01754":null,"SJAG_02444":null,"SJAG_03081":null,"SJAG_04026":null,"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to hexose stimulus","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071331","terms_by_termid":{"GO:0010619":null}}


id: GO:0070180
data:
  {"annotated_genes":["SJAG_00315","SJAG_02535","SJAG_04847","SJAG_03197","SJAG_01087","SJAG_05248","SJAG_03297"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72072,73026,76110,76559,78387,81798,116345],"is_not":false,"summary":null,"term":"GO:0070180"}]},"cv_name":"molecular_function","definition":"Binding to large ribosomal subunit RNA (LSU rRNA), a constituent of the large ribosomal subunit. In S. cerevisiae, this is the 25S rRNA.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA binding","termid":"GO:0019843"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00315":null,"SJAG_01087":null,"SJAG_02535":null,"SJAG_03197":null,"SJAG_03297":null,"SJAG_04847":null,"SJAG_05248":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003723"],"is_obsolete":false,"name":"large ribosomal subunit rRNA binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"25S rRNA binding","type":"exact"},{"name":"LSU rRNA binding","type":"exact"}],"termid":"GO:0070180","terms_by_termid":{"GO:0070180":null}}


id: PBO:0057965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3686","termid":"PBO:0057965"}


id: PBO:0002248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate kinase (predicted)","termid":"PBO:0002248"}


id: FYPO:0006944
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount on one or more ribosomal proteins measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah","PMID:30862564"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"decreased ribosomal protein level","synonyms":[{"name":"decreased cellular ribosomal protein level","type":"exact"},{"name":"decreased ribosomal protein level during mitotic cell cycle","type":"related"},{"name":"decreased ribosomal protein level during vegetative growth","type":"exact"},{"name":"reduced ribosomal protein level","type":"exact"}],"termid":"FYPO:0006944"}


id: PBO:0038775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein T3","termid":"PBO:0038775"}


id: PBO:0064794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPM1L divergent transcript","termid":"PBO:0064794"}


id: PBO:0073351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family B member 10","termid":"PBO:0073351"}


id: PR:O94377
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atp17 gene.","definition_xrefs":["UniProtKB:O94377","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase subunit f, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.11","synonyms":[{"name":"Spom972h-atp17","type":"exact"}],"termid":"PR:O94377"}


id: PR:Q9HDX2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An L-lactate dehydrogenase [cytochrome] that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized lactate 2-monooxygenase PB1A11.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1A11.03","secondary_identifiers":["UniProtKB:Q9HDX2"],"synonyms":[{"name":"Spom972h-lldD","type":"exact"}],"termid":"PR:Q9HDX2"}


id: GO:0070864
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cellular structure that includes cytoskeletal components and part of the cell membrane. Forms at the nuclear end of a male germline syncytium, or cyst, and translocates the over the length of the syncytium in the course of sperm individualization. Each complex contains an array of 64 investment cones, one per nucleus, that move synchronously along the spermatogenic cyst.","definition_xrefs":["PMID:10588662","GOC:sart","PMID:9550716"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"sperm individualization complex","termid":"GO:0070864"}


id: GO:2000688
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of rubidium ion transmembrane transporter activity.","definition_xrefs":["GOC:yaf"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of rubidium ion transmembrane transporter activity (obsolete GO:2000688)","synonyms":[{"name":"positive regulation of Rb+ transmembrane transporter activity","type":"exact"},{"name":"positive regulation of rubidium cation transmembrane transporter activity","type":"exact"},{"name":"positive regulation of rubidium transmembrane transporter activity","type":"related"}],"termid":"GO:2000688"}


id: GO:0102721
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O2 + 2 an ubiquinol = 2 H2O + 2 an ubiquinone.","definition_xrefs":["RHEA:30255","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor","termid":"GO:0016682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"ubiquinol:oxygen oxidoreductase activity","secondary_identifiers":["EC:1.10.3.11","MetaCyc:RXN-6883"],"termid":"GO:0102721"}


id: FYPO:0007428
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the nucleation of microtubules from the old mitotic spindle pole body begins later than normal.","definition_xrefs":["PMID:19487457","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule nucleation during vegetative growth","termid":"FYPO:0005692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000054","FYPO:0001985"],"is_obsolete":false,"name":"delayed onset of mitotic spindle microtubule nucleation from old spindle pole body","synonyms":[{"name":"delayed mitotic spindle microtubule nucleation from old spindle pole body","type":"exact"},{"name":"delayed monopolar mitotic spindle nucleation from old spindle pole body","type":"related"},{"name":"delayed onset of mitotic spindle microtubule nucleation from old SPB","type":"exact"},{"name":"delayed onset of mitotic spindle microtubule nucleation from old spindle pole body during mitotic cell cycle","type":"related"},{"name":"delayed onset of mitotic spindle microtubule nucleation from old spindle pole body during vegetative growth","type":"exact"}],"termid":"FYPO:0007428"}


id: PBO:0063832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"putative homeodomain transcription factor 2","termid":"PBO:0063832"}


id: PBO:0088671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-2 adaptor complex mu subunit Apm4","termid":"PBO:0088671"}


id: FYPO:0005776
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing v.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000003","FYPO:0002060","FYPO:0002058","FYPO:0000139","FYPO:0000257"],"is_obsolete":false,"name":"normal growth on acetaldehyde","synonyms":[{"name":"normal cell population growth in presence of acetaldehyde","type":"exact"},{"name":"normal cell population growth on acetaldehyde","type":"exact"},{"name":"normal vegetative cell population growth on acetaldehyde","type":"exact"}],"termid":"FYPO:0005776"}


id: MONDO:0012177
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Posterior column ataxia - retinitis pigmentosa is characterized by the association of progressive sensory ataxia and retinitis pigmentosa.","definition_xrefs":["Orphanet:88628"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FLVCR1-related retinopathy with or without ataxia","termid":"MONDO:0100449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0006025","MONDO:0005559"],"is_obsolete":false,"name":"posterior column ataxia-retinitis pigmentosa syndrome","secondary_identifiers":["OMIM:609033","UMLS:C1836916","SCTID:724065003","GARD:9898","MEDGEN:324636","MESH:C536343"],"synonyms":[{"name":"AXPC1","type":"related"},{"name":"PCARP","type":"exact"},{"name":"POSTERIOR column ataxia with retinitis pigmentosa","type":"related"},{"name":"Pcarp","type":"related"},{"name":"ataxia, posterior column, with retinitis pigmentosa","type":"exact"},{"name":"autosomal recessive posterior column ataxia and retinitis pigmentosa","type":"exact"}],"termid":"MONDO:0012177","xrefs":{"Monarch":{"xref_id":"0012177"}}}


id: PBO:0062488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily B member 4","termid":"PBO:0062488"}


id: GO:1904594
data:
  {"annotated_genes":["SJAG_03126"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113819],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904595"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of termination of RNA polymerase II transcription.","definition_xrefs":["PMID:25417108","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of termination of DNA-templated transcription","termid":"GO:0031554"},{"relation_name":"regulates","term_name":"termination of RNA polymerase II transcription","termid":"GO:0006369"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03126":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of termination of RNA polymerase II transcription","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of RNA 3'-end formation by RNA polymerase II","type":"exact"},{"name":"regulation of RNA polymerase II transcription termination","type":"exact"},{"name":"regulation of RNA polymerase II transcription termination factor activity","type":"related"},{"name":"regulation of transcription termination from Pol II promoter","type":"exact"},{"name":"regulation of transcription termination from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1904594","terms_by_termid":{"GO:1904595":null}}


id: PBO:0052287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like ECH associated protein 1","termid":"PBO:0052287"}


id: PBO:0054788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2201","termid":"PBO:0054788"}


id: PBO:0070868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL14 pseudogene 6","termid":"PBO:0070868"}


id: PBO:0027451
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-loss_of_viability_at_low_temperature","termid":"PBO:0027451"}


id: PBO:0079838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-5 netrin receptor C","termid":"PBO:0079838"}


id: GO:0099130
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an estrogen.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone binding","termid":"GO:0042562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"estrogen binding","termid":"GO:0099130"}


id: PBO:0047242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 236 member B","termid":"PBO:0047242"}


id: MOD:01247
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:00813 after formula correction. Remap to MOD:00813.","definition_xrefs":["PubMed:11857757","Unimod:295#T","PubMed:15189151","PubMed:11344537"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01247 fucosylated -site T (obsolete MOD:01247)","synonyms":[{"name":"Fucose","type":"related"},{"name":"dHex","type":"related"}],"termid":"MOD:01247"}


id: GO:1903085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sinapate ester biosynthesis.","definition_xrefs":["GO_REF:0000058","PMID:11080161","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"is_a","term_name":"regulation of phenylpropanoid metabolic process","termid":"GO:2000762"},{"relation_name":"regulates","term_name":"sinapate ester biosynthetic process","termid":"GO:0033525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"regulation of sinapate ester biosynthetic process","synonyms":[{"name":"regulation of sinapate ester anabolism","type":"exact"},{"name":"regulation of sinapate ester biosynthesis","type":"exact"},{"name":"regulation of sinapate ester formation","type":"exact"},{"name":"regulation of sinapate ester synthesis","type":"exact"}],"termid":"GO:1903085"}


id: PR:P0CT58
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps2201 gene.","definition_xrefs":["UniProtKB:P0CT58","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S22-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22A12.04c","synonyms":[{"name":"Spom972h-rps2201","type":"exact"}],"termid":"PR:P0CT58"}


id: GO:0070501
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of poly-gamma-glutamate, a polymer of D- and/or L-glutamic acid residues linked by gamma-peptidyl bonds.","definition_xrefs":["PMID:16689787","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"poly-gamma-glutamate biosynthetic process","synonyms":[{"name":"poly-gamma-glutamate anabolism","type":"exact"},{"name":"poly-gamma-glutamate biosynthesis","type":"exact"},{"name":"poly-gamma-glutamate formation","type":"exact"},{"name":"poly-gamma-glutamate synthesis","type":"exact"}],"termid":"GO:0070501"}


id: PATO:0000887
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000887 relative litter size value (obsolete PATO:0000887)","termid":"PATO:0000887"}


id: PBO:0053663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 840","termid":"PBO:0053663"}


id: GO:2000628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of miRNA metabolic process.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of RNA metabolic process","termid":"GO:0051252"},{"relation_name":"regulates","term_name":"miRNA metabolic process","termid":"GO:0010586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of miRNA metabolic process","synonyms":[{"name":"regulation of microRNA metabolic process","type":"exact"}],"termid":"GO:2000628"}


id: PBO:0060364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myomesin 3","termid":"PBO:0060364"}


id: PBO:0084211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Homocitrate synthase isozyme; catalyzes the condensation of acetyl-CoA and alpha-ketoglutarate to form homocitrate, which is the first step in the lysine biosynthesis pathway; LYS21 has a paralog, LYS20, that arose from the whole genome duplication","termid":"PBO:0084211"}


id: GO:0003045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulation of blood pressure mediated by detection of forces within the circulatory system.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure","termid":"GO:0003073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by physical factors","synonyms":[{"name":"blood pressure regulation by physical factors","type":"exact"}],"termid":"GO:0003045"}


id: PBO:0062623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily G member 2","termid":"PBO:0062623"}


id: MONDO:0007503
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"microtia","termid":"MONDO:0010920"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ear without helix","secondary_identifiers":["MEDGEN:343678","OMIM:128800","UMLS:C1851899"],"synonyms":[{"name":"ear without helix","type":"exact"}],"termid":"MONDO:0007503","xrefs":{"Monarch":{"xref_id":"0007503"}}}


id: PBO:0084959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYND domain-containing protein; component of the Mub1p-Ubr2p-Rad6p ubiquitin ligase complex, required for ubiquitination and degradation of Rpn4p; interacts with Ubr2p (E3) and indirectly with Rad6p (E2); short-lived protein degraded in a Ubr2p/Rad6p dependent manner; proposed to function as both a partner and substrate of the Ubr2p/Rad6p ubiquitin ligase; similar to the A. nidulans samB gene","termid":"PBO:0084959"}


id: PBO:0067908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 210","termid":"PBO:0067908"}


id: RO:0001000
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"a relation between two distinct material entities, the new entity and the old entity, in which the new entity begins to exist when the old entity ceases to exist, and the new entity inherits the significant portion of the matter of the old entity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"derives_from","termid":"RO:0001000"}


id: MONDO:0002523
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The mucinoses are a diverse group of disorders which have in common the deposition of basophilic, finely granular and stringy material (mucin) in the connective tissues of the dermis (dermal mucinoses), in the pilosebaceous follicles (follicular mucinoses), or in the epidermis and tumors derived therefrom (epithelial mucinoses).","definition_xrefs":["ISBN-13:978-0-7020-3485-5"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"connective tissue disorder","termid":"MONDO:0003900"},{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"cutaneous mucinosis","secondary_identifiers":["MEDGEN:56520","MESH:D017520","icd11.foundation:2018255084","SCTID:402721001","DOID:3141","UMLS:C0162855","ICD9:701.8"],"synonyms":[{"name":"mucinoses","type":"related"},{"name":"mucinosis","type":"exact"},{"name":"mucinosis affecting the skin","type":"exact"}],"termid":"MONDO:0002523","xrefs":{"Monarch":{"xref_id":"0002523"}}}


id: PBO:0090519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroporphyrinogen decarboxylase Hem12","termid":"PBO:0090519"}


id: MONDO:0010634
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"jaundice, familial obstructive, of infancy","secondary_identifiers":["OMIM:308600","MEDGEN:326992","MESH:C564118","UMLS:C1839927"],"synonyms":[{"name":"jaundice, familial obstructive, of infancy","type":"exact"}],"termid":"MONDO:0010634","xrefs":{"Monarch":{"xref_id":"0010634"}}}


id: MONDO:0006183
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, benign process that affects the peritoneal cavity and is characterized by the formation of multiple small nodules that are composed of well differentiated smooth muscle. It usually affects adults in their late reproductive years. Most patients are asymptomatic. The tumor nodules may regress spontaneously.","definition_xrefs":["NCIT:C3958"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peritoneal benign neoplasm","termid":"MONDO:0000650"},{"relation_name":"is_a","term_name":"leiomyomatosis","termid":"MONDO:0003295"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disseminated peritoneal leiomyomatosis","secondary_identifiers":["SCTID:62557001","UMLS:C0267785","EFO:1000220","GARD:12843","MEDGEN:78634","DOID:5728","Orphanet:71274"],"synonyms":[{"name":"DPL","type":"exact"},{"name":"LPD","type":"exact"},{"name":"diffuse peritoneal leiomyomatosis","type":"exact"},{"name":"disseminated peritoneal leiomyomatosis","type":"exact"},{"name":"leiomyomatosis peritonealis disseminata","type":"exact"},{"name":"leiomyomatosis peritonealis disseminate","type":"exact"}],"termid":"MONDO:0006183","xrefs":{"Monarch":{"xref_id":"0006183"}}}


id: PBO:0078649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon CTT) 2-5","termid":"PBO:0078649"}


id: MONDO:0975842
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 96","secondary_identifiers":["OMIM:621001"],"termid":"MONDO:0975842","xrefs":{"Monarch":{"xref_id":"0975842"}}}


id: FYPO:0007187
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of any heme measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular heme level","synonyms":[{"name":"decreased cellular haem level","type":"exact"},{"name":"decreased cellular heme level during mitotic cell cycle","type":"related"},{"name":"decreased cellular heme level during vegetative growth","type":"exact"},{"name":"reduced cellular heme level","type":"exact"}],"termid":"FYPO:0007187"}


id: PBO:0065028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxiredoxin 4 pseudogene 2","termid":"PBO:0065028"}


id: MONDO:0011064
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrodysplasia","termid":"MONDO:0005516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"lethal chondrodysplasia, Seller type","secondary_identifiers":["GARD:3226","MEDGEN:318622","MESH:C563330","OMIM:601376","Orphanet:1421","UMLS:C1832410"],"synonyms":[{"name":"chondrodysplasia, lethal, with long bone angulation and mixed bone density","type":"related"},{"name":"lethal chondrodysplasia seller type","type":"related"}],"termid":"MONDO:0011064","xrefs":{"Monarch":{"xref_id":"0011064"}}}


id: MONDO:0024352
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A respiratory tract infection caused by a virus. Viruses represent the most common causes of upper and lower respiratory tract infections and include rhinoviruses, influenza viruses, parainfluenza viruses, and respiratory syncytial virus.","definition_xrefs":["NCIT:C27219"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease","termid":"MONDO:0005108"},{"relation_name":"is_a","term_name":"respiratory tract infectious disorder","termid":"MONDO:0024355"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"viral respiratory tract infection","secondary_identifiers":["UMLS:C0877203","MEDGEN:163755","ICD9:519.8","SCTID:312133006"],"synonyms":[{"name":"viral respiratory tract infection","type":"exact"}],"termid":"MONDO:0024352","xrefs":{"Monarch":{"xref_id":"0024352"}}}


id: GO:0061819
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A telomere maintenance process that results in the formation of small fragments of circular extrachromosomal DNA elements which contain telomeric DNA. It is speculated that telomeric DNA-containing double minutes are formed through a recombination event between the telomere and chromosome-internal TTAGGG-like sequences. Telomeric DNA-containing double minutes appear as two closely positioned dots in metaphase.","definition_xrefs":["GOC:BHF_telomere","GOC:nc","PMID:14690602","PMID:2397458","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomere maintenance via recombination","termid":"GO:0000722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0008150","GO:0032200","GO:0006259","GO:0006310"],"is_obsolete":false,"name":"telomeric DNA-containing double minutes formation","synonyms":[{"name":"TDMs formation","type":"exact"}],"termid":"GO:0061819"}


id: PBO:0061806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"outer dense fiber of sperm tails 3 like 2","termid":"PBO:0061806"}


id: FYPO:0006206
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin is decreased during a cellular response to phosphate starvation.","definition_xrefs":["PMID:19933844","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to chromatin during vegetative growth","termid":"FYPO:0002909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to chromatin during cellular response to phosphate starvation","synonyms":[{"name":"decreased protein localisation to chromatin during cellular response to phosphate starvation","type":"exact"},{"name":"decreased protein localization to chromatin during cellular response to phosphate ion starvation","type":"exact"},{"name":"decreased protein localization to chromatin during cellular response to phosphate starvation during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to chromatin during cellular response to phosphate starvation during vegetative growth","type":"exact"},{"name":"reduced protein localization to chromatin during cellular response to phosphate starvation","type":"exact"}],"termid":"FYPO:0006206"}


id: GO:0141147
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a solute by a channel that opens when calcium ions bind on the intracellular side of the channel complex or one of its constituent parts.","definition_xrefs":["PMID:20929730","PMID:23021213"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligand-gated channel activity","termid":"GO:0022834"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"intracellularly calcium-gated channel activity","termid":"GO:0141147"}


id: MONDO:0003191
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An exceptionally rare adenocarcinoma that arises from the rete ovarii.","definition_xrefs":["NCIT:C40017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian adenocarcinoma","termid":"MONDO:0002752"},{"relation_name":"is_a","term_name":"rete ovarii neoplasm","termid":"MONDO:0003192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"rete ovarii adenocarcinoma","secondary_identifiers":["MEDGEN:826068","DOID:4894","UMLS:C3840223"],"synonyms":[{"name":"rete ovarii adenocarcinoma","type":"exact"}],"termid":"MONDO:0003191","xrefs":{"Monarch":{"xref_id":"0003191"}}}


id: GO:0050188
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphoenolpyruvate = 3-phosphonopyruvate.","definition_xrefs":["RHEA:17013","EC:5.4.2.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular phosphotransferase activity","termid":"GO:0016868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"phosphoenolpyruvate mutase activity","secondary_identifiers":["KEGG_REACTION:R00661","MetaCyc:PHOSPHOENOLPYRUVATE-MUTASE-RXN"],"synonyms":[{"name":"PEP mutase activity","type":"related"},{"name":"PEP phosphomutase activity","type":"related"},{"name":"PEPPM","type":"related"},{"name":"phosphoenolpyruvate 2,3-phosphonomutase activity","type":"related"},{"name":"phosphoenolpyruvate phosphomutase activity","type":"related"},{"name":"phosphoenolpyruvate-phosphonopyruvate phosphomutase activity","type":"related"}],"termid":"GO:0050188"}


id: PBO:0000490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GAT domain","termid":"PBO:0000490"}


id: PBO:0046460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epithelial stromal interaction 1","termid":"PBO:0046460"}


id: PBO:0089441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cobalamin (vitamin B12) biosynthesis CobW-like protein","termid":"PBO:0089441"}


id: GO:0019837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete herbicide susceptibility/resistance (obsolete GO:0019837)","synonyms":[{"name":"herbicide susceptibility/resistance","type":"exact"}],"termid":"GO:0019837"}


id: MONDO:0001907
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dermatomyositis in an adult.","definition_xrefs":["NCIT:C27313"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatomyositis","termid":"MONDO:0016367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005336"],"is_obsolete":false,"name":"adult dermatomyositis","secondary_identifiers":["DOID:14202","UMLS:C0221056","icd11.foundation:544509908","MEDGEN:66356","SCTID:402425006"],"synonyms":[{"name":"adult onset dermatomyositis","type":"exact"},{"name":"dermatomyositis of adults","type":"exact"}],"termid":"MONDO:0001907","xrefs":{"Monarch":{"xref_id":"0001907"}}}


id: PBO:0015223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosidase II alpha subunit Gls2","termid":"PBO:0015223"}


id: MONDO:0030679
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Noonan syndrome","termid":"MONDO:0018997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0005046"],"is_obsolete":false,"name":"Noonan syndrome 14","secondary_identifiers":["OMIM:619745","MEDGEN:1807988","UMLS:C5676916"],"synonyms":[{"name":"NS14","type":"exact"},{"name":"Noonan syndrome 14","type":"exact"}],"termid":"MONDO:0030679","xrefs":{"Monarch":{"xref_id":"0030679"}}}


id: MONDO:0010089
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"encephalopathy due to sulfite oxidase deficiency","termid":"MONDO:0019358"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005328"],"is_obsolete":false,"name":"isolated sulfite oxidase deficiency","secondary_identifiers":["icd11.foundation:963607692","GARD:5062","MEDGEN:78695","DOID:0111270","SCTID:367368009","MESH:C538141","NANDO:2200583","OMIM:272300","Orphanet:99731","UMLS:C0268624"],"synonyms":[{"name":"ISOD","type":"exact"},{"name":"Sulfocysteinuria","type":"exact"},{"name":"isolated sulfite oxidase deficiency","type":"exact"},{"name":"sulfite oxidase deficiency","type":"exact"},{"name":"sulfite oxidase deficiency, isolated","type":"exact"},{"name":"sulfocysteinuria","type":"exact"}],"termid":"MONDO:0010089","xrefs":{"Monarch":{"xref_id":"0010089"}}}


id: PBO:0002981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein Klf1","termid":"PBO:0002981"}


id: PBO:0052544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kallikrein pseudogene 1","termid":"PBO:0052544"}


id: MONDO:0030313
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"encephalitis, acute, infection-induced, susceptibility to","termid":"MONDO:0800174"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"encephalopathy, acute, infection-induced (herpes-specific), susceptibility to, 10","secondary_identifiers":["UMLS:C5543600","MEDGEN:1782836","OMIM:619396"],"synonyms":[{"name":"IIAE10","type":"exact"},{"name":"encephalopathy, acute, infection-induced (herpes-specific), susceptibility to, 10","type":"exact"},{"name":"herpes simplex encephalitis, susceptibility to, 7","type":"related"}],"termid":"MONDO:0030313","xrefs":{"Monarch":{"xref_id":"0030313"}}}


id: PBO:0076947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TDP-glucose 4,6-dehydratase","termid":"PBO:0076947"}


id: MONDO:0016975
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A thymic epithelial neoplasm characterized by the presence of a lymphocyte-poor component similar to that seen in type A thymoma and a lymphocyte-rich component which contains neoplastic small polygonal epithelial cells. It may be associated with myasthenia gravis and pure red cell aplasia. The majority of cases occur in the anterior mediastinum as Masaoka stage I tumors. A minority of the cases occur as stage II or stage III tumors. The overall survival is reported to be 80-100% at 5 and 10 years.","definition_xrefs":["NCIT:C6885"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thymoma","termid":"MONDO:0006456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"thymoma type AB","secondary_identifiers":["EFO:1000582","MEDGEN:220414","GARD:20894","UMLS:C1266092","DOID:3280","ICDO:8582/1","Orphanet:263324","ICD10CM:D15.0"],"synonyms":[{"name":"mixed type thymoma","type":"exact"},{"name":"primary thymic epithelial neoplasm type AB","type":"exact"},{"name":"primary thymic epithelial tumor type AB","type":"exact"},{"name":"primary thymic epithelial tumour type AB","type":"exact"},{"name":"thymoma type AB","type":"exact"},{"name":"thymoma, mixed type","type":"exact"}],"termid":"MONDO:0016975","xrefs":{"Monarch":{"xref_id":"0016975"}}}


id: PATO:0002536
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having a shape like a boomerang, with two arms connected at an angle.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"boomerang shaped","termid":"PATO:0002536"}


id: GO:1903090
data:
  {"annotated_genes":["SJAG_02152","SJAG_03652","SJAG_02962","SJAG_03808"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91952,91953,119333,120631],"is_not":false,"summary":null,"term":"GO:1903090"}]},"cv_name":"biological_process","definition":"The process in which pyridoxal is transported across a membrane.","definition_xrefs":["PMID:15701794","GO_REF:0000069","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridoxal transport","termid":"GO:0031920"},{"relation_name":"is_a","term_name":"vitamin transmembrane transport","termid":"GO:0035461"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02152":null,"SJAG_02962":null,"SJAG_03652":null,"SJAG_03808":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"pyridoxal transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1903090","terms_by_termid":{"GO:1903090":null}}


id: PBO:0045523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dystrobrevin binding protein 1","termid":"PBO:0045523"}


id: SO:0000699
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence_feature with an extent of zero.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_feature","termid":"SO:0000110"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"junction","synonyms":[{"name":"boundary","type":"exact"},{"name":"breakpoint","type":"exact"}],"termid":"SO:0000699"}


id: MONDO:0859335
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"congenital myopathy 15","secondary_identifiers":["DOID:0081347","OMIM:620161","UMLS:C5774273","MEDGEN:1824046"],"termid":"MONDO:0859335","xrefs":{"Monarch":{"xref_id":"0859335"}}}


id: MONDO:0054804
data:
  {"annotated_genes":["SJAG_03161"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87800],"is_not":false,"summary":null,"term":"MONDO:0054804"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive primary microcephaly","termid":"MONDO:0016660"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03161":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0700092"],"is_obsolete":false,"name":"microcephaly 21, primary, autosomal recessive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16278","OMIM:617983","UMLS:C4693831","MEDGEN:1646916"],"synonyms":[{"name":"MCPH21","type":"related"},{"name":"microcephaly 21, PRIMARY, autosomal recessive","type":"related"}],"termid":"MONDO:0054804","terms_by_termid":{"MONDO:0054804":null},"xrefs":{"Monarch":{"xref_id":"0054804"}}}


id: MONDO:0004927
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital or acquired mucocele that develops in the lacrimal sac. It is usually the result of nasolacrimal duct abnormalities or obstruction.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic inflammation of lacrimal passage","termid":"MONDO:0004923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"dacryocystocele","secondary_identifiers":["ICD9:375.43","UMLS:C0155241","MEDGEN:472901","DOID:9939"],"synonyms":[{"name":"lacrimal mucocele","type":"exact"}],"termid":"MONDO:0004927","xrefs":{"Monarch":{"xref_id":"0004927"}}}


id: GO:0006275
data:
  {"annotated_genes":["SJAG_01068","SJAG_03720","SJAG_02162","SJAG_03438","SJAG_03097","SJAG_03957","SJAG_04855","SJAG_01210","SJAG_03048","SJAG_03695","SJAG_00364","SJAG_04671","SJAG_02724","SJAG_00247","SJAG_03997","SJAG_03160"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118711],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903464"},{"annotations":[99588,104191,110737],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903467"},{"annotations":[119144,113893],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903468"},{"annotations":[118094,108455,104197,90875],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904514"},{"annotations":[97562],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090297"},{"annotations":[104201],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903465"},{"annotations":[105050],"is_not":false,"rel_names":["is_a","regulates"],"summary":null,"term":"GO:1902681"},{"annotations":[105051,101176,108469,110356],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0011000"},{"annotations":[104097,116886,101177],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031582"},{"annotations":[101178],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090001"},{"annotations":[104098],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071807"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of DNA replication.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA metabolic process","termid":"GO:0051052"},{"relation_name":"regulates","term_name":"DNA replication","termid":"GO:0006260"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00247":null,"SJAG_00364":null,"SJAG_01068":null,"SJAG_01210":null,"SJAG_02162":null,"SJAG_02724":null,"SJAG_03048":null,"SJAG_03097":null,"SJAG_03160":null,"SJAG_03438":null,"SJAG_03695":null,"SJAG_03720":null,"SJAG_03957":null,"SJAG_03997":null,"SJAG_04671":null,"SJAG_04855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0006260","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"regulation of DNA replication","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006275","terms_by_termid":{"GO:0011000":null,"GO:0031582":null,"GO:0071807":null,"GO:0090001":null,"GO:0090297":null,"GO:1902681":null,"GO:1903464":null,"GO:1903465":null,"GO:1903467":null,"GO:1903468":null,"GO:1904514":null}}


id: PBO:0076428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 11 like 4","termid":"PBO:0076428"}


id: PBO:0055696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LKAAEAR motif containing 1","termid":"PBO:0055696"}


id: MONDO:0001549
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute kidney injury associated with microangiopathic hemolytic anemia and thrombocytopenia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hemolytic anemia","termid":"MONDO:0003664"},{"relation_name":"excluded_subClassOf","term_name":"obsolete rare constitutional hemolytic anemia (obsolete MONDO:0015910)","termid":"MONDO:0015910"},{"relation_name":"excluded_subClassOf","term_name":"thrombotic microangiopathy","termid":"MONDO:0019737"},{"relation_name":"is_a","term_name":"blood coagulation disease","termid":"MONDO:0001531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"hemolytic-uremic syndrome","secondary_identifiers":["MESH:D006463","DOID:12554","ICD10CM:D59.3","ICD9:283.11","NCIT:C75545","UMLS:C0019061","GARD:22233","MEDGEN:42403","Orphanet:544458","SCTID:111407006"],"synonyms":[{"name":"HUS","type":"exact"},{"name":"acute renal failure, thrombocytopenia, and microangiopathic hemolytic anaemia associated with distorted erythrocytes ('burr cells')","type":"related"},{"name":"acute renal failure, thrombocytopenia, and microangiopathic hemolytic anemia associated with distorted erythrocytes ('burr cells')","type":"related"},{"name":"haemolytic-uraemic syndrome","type":"exact"},{"name":"hemolytic uremic syndrome","type":"exact"}],"termid":"MONDO:0001549","xrefs":{"Monarch":{"xref_id":"0001549"}}}


id: GO:0009170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving purine deoxyribonucleoside monophosphate, a compound consisting of a purine base linked to a deoxyribose sugar esterified with phosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside monophosphate metabolic process","termid":"GO:0009126"},{"relation_name":"is_a","term_name":"deoxyribonucleoside monophosphate metabolic process","termid":"GO:0009162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"purine deoxyribonucleoside monophosphate metabolic process","synonyms":[{"name":"purine deoxyribonucleoside monophosphate metabolism","type":"exact"}],"termid":"GO:0009170"}


id: FYPO:0001217
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which nuclear import is abnormal. Nuclear import is the directed movement of any substance out of the nucleus; import of all substances or a specific substance may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear transport during vegetative growth","termid":"FYPO:0000518"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abnormal nuclear import","synonyms":[{"name":"abnormal nuclear import during mitotic cell cycle","type":"related"},{"name":"abnormal nuclear import during vegetative growth","type":"exact"}],"termid":"FYPO:0001217"}


id: GO:0018410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The alteration of the C-terminal amino acid residue in a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-translational protein modification","termid":"GO:0043687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"C-terminal protein amino acid modification","synonyms":[{"name":"peptide or protein carboxyl-terminal blocking","type":"related"},{"name":"peptide/protein carboxyl-terminal blocking","type":"related"}],"termid":"GO:0018410"}


id: MONDO:0007253
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer, familial, with in vitro Radioresistance","secondary_identifiers":["MEDGEN:396248","OMIM:114450","UMLS:C1861915","MESH:C566179"],"synonyms":[{"name":"cancer, familial, with in vitro RADIORESISTANCE","type":"related"}],"termid":"MONDO:0007253","xrefs":{"Monarch":{"xref_id":"0007253"}}}


id: PBO:0074059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 37","termid":"PBO:0074059"}


id: PBO:0054645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2050","termid":"PBO:0054645"}


id: GO:0160134
data:
  {"annotated_genes":["SJAG_01249"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102283],"is_not":false,"summary":null,"term":"GO:0160134"}]},"cv_name":"molecular_function","definition":"A protein adaptor activity characterized by the capacity to selectively recognize and interact with RNA molecules in a sequence-specific manner. Entities possessing this activity typically exhibit discerning binding preferences for specific nucleotide sequences within RNA molecules, enabling the identification and engagement of distinct RNA motifs or structural elements. This function is integral to various biological processes, including RNA processing, transport, and regulatory mechanisms, contributing to the specificity and precision of cellular RNA-related activities.","definition_xrefs":["PMID:17036044","PMID:14749727"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA adaptor activity","termid":"GO:0140517"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01249":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0030674","GO:0060090","GO:0003674"],"is_obsolete":false,"name":"protein-RNA sequence-specific adaptor activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0160134","terms_by_termid":{"GO:0160134":null}}


id: FYPO:0005819
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the neddylation of one or more specific proteins, or of specific protein sites, is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification during vegetative growth","termid":"FYPO:0000329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0002494","FYPO:0002274","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein neddylation during vegetative growth","synonyms":[{"name":"abnormal protein neddylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005819"}


id: PBO:0083417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the REG2/YBR050C regulatory subunit of the Glc7p type-1 protein phosphatase","termid":"PBO:0083417"}


id: PBO:0087149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-dependent ATPase RNA helicase (DEIH box); required for disruption of U4/U6 base-pairing in native snRNPs to activate the spliceosome for catalysis; homologous to human U5-200kD","termid":"PBO:0087149"}


id: MONDO:0014986
data:
  {"annotated_genes":["SJAG_01410"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88809],"is_not":false,"summary":null,"term":"MONDO:0014986"}]},"cv_name":"mondo","definition":"Any Fanconi anemia in which the cause of the disease is a mutation in the RAD51 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fanconi anemia","termid":"MONDO:0019391"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01410":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0021190"}],"interesting_parent_ids":["MONDO:0021190","MONDO:0005046","MONDO:0005066","MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"Fanconi anemia complementation group R","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:617244","GARD:16214","DOID:0111090","MEDGEN:924579","UMLS:C4284093"],"synonyms":[{"name":"FANCR","type":"exact"},{"name":"Fanconi Anemia, complementation group R","type":"exact"},{"name":"Fanconi Anemia, complementation group type R","type":"exact"},{"name":"Fanconi anaemia caused by mutation in RAD51","type":"exact"},{"name":"Fanconi anaemia complementation group type R","type":"exact"},{"name":"Fanconi anemia caused by mutation in RAD51","type":"exact"},{"name":"Fanconi anemia complementation group type R","type":"exact"},{"name":"Fanconi anemia, complementation GROUP R","type":"related"},{"name":"RAD51 Fanconi anaemia","type":"exact"},{"name":"RAD51 Fanconi anemia","type":"exact"}],"termid":"MONDO:0014986","terms_by_termid":{"MONDO:0014986":null},"xrefs":{"Monarch":{"xref_id":"0014986"}}}


id: GO:0002773
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular ligand binding to a receptor on the surface of a B cell capable of inhibiting an immune effector process contributing to an immune response.","definition_xrefs":["PMID:16413920","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response-inhibiting cell surface receptor signaling pathway","termid":"GO:0002767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"B cell inhibitory signaling pathway","synonyms":[{"name":"B cell inhibitory signalling pathway","type":"exact"},{"name":"B lymphocyte inhibitory signaling pathwayBT-lymphocyte inhibitory signaling pathway","type":"exact"},{"name":"B-cell inhibitory signaling pathway","type":"exact"}],"termid":"GO:0002773"}


id: PBO:0012003
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-consensus GAG acceptor","termid":"PBO:0012003"}


id: GO:0045851
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that reduces the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pH","termid":"GO:0006885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pH reduction","synonyms":[{"name":"acidification","type":"exact"}],"termid":"GO:0045851"}


id: PBO:0087380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sterol binding protein involved in the export of acetylated sterols; role in sterol export is redundant with that of PRY1; redundant role with PRY1 and PRY3 in the export of free fatty acids; may be involved in detoxification of hydrophobic compounds; secreted glycoprotein and member of the CAP protein superfamily (cysteine-rich secretory proteins (CRISP), antigen 5, and pathogenesis related 1 proteins)","termid":"PBO:0087380"}


id: MONDO:0007268
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal dominant condition caused by mutation(s) in the MYBPC3 gene, encoding MYBPC3 protein. It is characterized by severe neonatal hypertrophic cardiomyopathy.","definition_xrefs":["NCIT:C133725"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hypertrophic cardiomyopathy","termid":"MONDO:0024573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"hypertrophic cardiomyopathy 4","secondary_identifiers":["UMLS:C1861862","MESH:C566169","OMIM:115197","DOID:0110310","MEDGEN:350526"],"synonyms":[{"name":"CMH4","type":"exact"},{"name":"MYBPC3 hypertrophic cardiomyopathy","type":"exact"},{"name":"cardiomyopathy, familial hypertrophic, 4","type":"exact"},{"name":"cardiomyopathy, familial hypertrophic, 4, susceptibility to","type":"related"},{"name":"cardiomyopathy, familial hypertrophic, type 4","type":"exact"},{"name":"cardiomyopathy, hypertrophic, 4","type":"exact"},{"name":"familial hypertrophic cardiomyopathy type 4","type":"exact"},{"name":"hypertrophic cardiomyopathy 4","type":"exact"},{"name":"hypertrophic cardiomyopathy caused by mutation in MYBPC3","type":"exact"},{"name":"hypertrophic cardiomyopathy type 4","type":"exact"}],"termid":"MONDO:0007268","xrefs":{"Monarch":{"xref_id":"0007268"}}}


id: GO:0070424
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of a nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway (NLR) pathway.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039531"},{"relation_name":"regulates","term_name":"nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway","termid":"GO:0035872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway","synonyms":[{"name":"regulation of NOD signaling pathway","type":"narrow"},{"name":"regulation of nucleotide-binding oligomerization domain containing signaling pathway","type":"narrow"},{"name":"regulation of nucleotide-binding oligomerization domain containing signalling pathway","type":"narrow"}],"termid":"GO:0070424"}


id: FYPO:0006573
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell during a cellular response to a pheromone is normal (i.e. indistinguishable from wild type). Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein level","termid":"FYPO:0004083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein level during cellular response to pheromone","synonyms":[{"name":"normal protein accumulation during cellular response to pheromone","type":"related"}],"termid":"FYPO:0006573"}


id: PATO:0001317
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A temperature which is increased by a high degree.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased temperature","termid":"PATO:0001305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"severe increased temperature","termid":"PATO:0001317"}


id: MONDO:0010245
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked cone-rod dystrophy","termid":"MONDO:0021155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"X-linked cone-rod dystrophy 2","secondary_identifiers":["MEDGEN:341161","MESH:C564717","OMIM:300085","GARD:1462","UMLS:C1848139","DOID:0111006"],"synonyms":[{"name":"COD2","type":"exact"},{"name":"CORDX2","type":"exact"},{"name":"X-linked cone dystrophy 2","type":"exact"},{"name":"X-linked cone-rod dystrophy type 2","type":"exact"},{"name":"cone dystrophy 2, X-linked","type":"exact"},{"name":"cone dystrophy X-linked 2","type":"exact"},{"name":"cone dystrophy, progressive X-linked, 2","type":"exact"},{"name":"cone-rod dystrophy X-linked 2","type":"exact"},{"name":"cone-rod dystrophy, X-linked, 2","type":"exact"}],"termid":"MONDO:0010245","xrefs":{"Monarch":{"xref_id":"0010245"}}}


id: MONDO:0036501
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm that does not respond to treatment.","definition_xrefs":["NCIT:C120186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cancer","termid":"MONDO:0004992"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"refractory malignant neoplasm","secondary_identifiers":["MEDGEN:146772","UMLS:C0677936"],"synonyms":[{"name":"clinical resistance","type":"related"},{"name":"refractory cancer","type":"exact"},{"name":"refractory malignant neoplasm","type":"exact"},{"name":"resistant cancer","type":"exact"}],"termid":"MONDO:0036501","xrefs":{"Monarch":{"xref_id":"0036501"}}}


id: GO:0030291
data:
  {"annotated_genes":["SJAG_01210","SJAG_03931","SJAG_03974","SJAG_01245"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110250,119909],"is_not":false,"summary":null,"term":"GO:0030291"},{"annotations":[72716],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004862"},{"annotations":[110740],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004861"}]},"cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of a protein serine/threonine kinase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase inhibitor activity","termid":"GO:0004860"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01210":null,"SJAG_01245":null,"SJAG_03931":null,"SJAG_03974":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0098772","GO:0140678","GO:0004857","GO:0030234","GO:0003674"],"is_obsolete":false,"name":"protein serine/threonine kinase inhibitor activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0030291","terms_by_termid":{"GO:0004861":null,"GO:0004862":null,"GO:0030291":null}}


id: PBO:0046494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoplasmic reticulum-golgi intermediate compartment 1","termid":"PBO:0046494"}


id: GO:0035372
data:
  {"annotated_genes":["SJAG_02045","SJAG_02695"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72455],"is_not":false,"summary":null,"term":"GO:0035372"},{"annotations":[98792],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904518"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained at, a microtubule.","definition_xrefs":["GOC:lb","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to microtubule cytoskeleton","termid":"GO:0072698"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02045":null,"SJAG_02695":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to microtubule","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation to microtubule","type":"exact"}],"termid":"GO:0035372","terms_by_termid":{"GO:0035372":null,"GO:1904518":null}}


id: GO:0071326
data:
  {"annotated_genes":["SJAG_00574","SJAG_01754","SJAG_01254","SJAG_04026","SJAG_00472","SJAG_03081","SJAG_02444","SJAG_01699","SJAG_04312"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107734,110856,103668,111367,108330,117395,118425,108680,96038],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010619"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a monosaccharide stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to monosaccharide","termid":"GO:0034284"},{"relation_name":"is_a","term_name":"cellular response to carbohydrate stimulus","termid":"GO:0071322"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00472":null,"SJAG_00574":null,"SJAG_01254":null,"SJAG_01699":null,"SJAG_01754":null,"SJAG_02444":null,"SJAG_03081":null,"SJAG_04026":null,"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to monosaccharide stimulus","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071326","terms_by_termid":{"GO:0010619":null}}


id: MONDO:0016328
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete fatty acid oxidation and ketogenesis disorder with hypertrophic cardiomyopathy (obsolete MONDO:0016328)","secondary_identifiers":["Orphanet:217591"],"termid":"MONDO:0016328","xrefs":{"Monarch":{"xref_id":"0016328"}}}


id: GO:0046676
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of insulin.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein secretion","termid":"GO:0050709"},{"relation_name":"is_a","term_name":"regulation of insulin secretion","termid":"GO:0050796"},{"relation_name":"is_a","term_name":"negative regulation of peptide hormone secretion","termid":"GO:0090278"},{"relation_name":"negatively_regulates","term_name":"insulin secretion","termid":"GO:0030073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"negative regulation of insulin secretion","secondary_identifiers":["Reactome:R-HSA-400042"],"synonyms":[{"name":"down regulation of insulin secretion","type":"exact"},{"name":"down-regulation of insulin secretion","type":"exact"},{"name":"downregulation of insulin secretion","type":"exact"},{"name":"inhibition of insulin secretion","type":"narrow"}],"termid":"GO:0046676"}


id: GO:0000007
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Zn2+ = Zn2+, probably powered by proton motive force. In low-affinity transport the transporter is able to bind the solute only if it is present at very high concentrations.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"zinc ion transmembrane transporter activity","termid":"GO:0005385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"low-affinity zinc ion transmembrane transporter activity","termid":"GO:0000007"}


id: PBO:0018208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase (predicted)","termid":"PBO:0018208"}


id: PBO:0050218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 35","termid":"PBO:0050218"}


id: PBO:0090664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SERF, N-terminal (4F5-like)","termid":"PBO:0090664"}


id: PBO:0085351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phospholipid-binding protein that interacts with both Ypt7p and Vps33p; may partially counteract the action of Vps33p and vice versa, localizes to the rim of the vacuole as cells approach stationary phase; contains a putative inverse BAR (I-BAR) domain that can mold lipid bilayer membranes into protrusions","termid":"PBO:0085351"}


id: PBO:0040949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 20","termid":"PBO:0040949"}


id: MONDO:0019896
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"epilepsy","termid":"MONDO:0005027"},{"relation_name":"excluded_subClassOf","term_name":"Kleefstra syndrome","termid":"MONDO:0012455"},{"relation_name":"is_a","term_name":"partial monosomy of the long arm of chromosome 9","termid":"MONDO:0016908"},{"relation_name":"is_a","term_name":"Kleefstra syndrome 1","termid":"MONDO:0027407"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kleefstra syndrome due to 9q34 microdeletion","secondary_identifiers":["Orphanet:96147","DECIPHER:52","GARD:16846"],"synonyms":[{"name":"9q subtelomeric deletion syndrome","type":"exact"},{"name":"9qSTDS","type":"exact"},{"name":"Kleefstra syndrome due to 9q subtelomeric deletion","type":"exact"},{"name":"Kleefstra syndrome due to del(9)(q34)","type":"exact"},{"name":"Kleefstra syndrome due to monosomy 9q34","type":"exact"}],"termid":"MONDO:0019896","xrefs":{"Monarch":{"xref_id":"0019896"}}}


id: GO:0003815
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the selective cleavage of Lys(or Arg)-Ile bond in complement subcomponent C1s to form the active form of C1s (EC:3.4.21.42).","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete complement component C1r activity (obsolete GO:0003815)","synonyms":[{"name":"C1r esterase activity","type":"related"},{"name":"activated complement C1r","type":"related"},{"name":"complement component C1r activity","type":"exact"},{"name":"complement subcomponent C1r","type":"related"}],"termid":"GO:0003815"}


id: PBO:0016905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyogamy protein Tht2","termid":"PBO:0016905"}


id: PBO:0080683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WAS/WASL interacting protein family member 3","termid":"PBO:0080683"}


id: PBO:0081238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 7","termid":"PBO:0081238"}


id: PBO:0075536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speedy/RINGO cell cycle regulator family member E16","termid":"PBO:0075536"}


id: MONDO:0005214
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant mesenchymal neoplasm that arises from the vulva. Representative examples include childhood botryoid-type embryonal rhabdomyosarcoma, alveolar soft part sarcoma, and leiomyosarcoma.","definition_xrefs":["NCIT:C40317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vulva cancer","termid":"MONDO:0001528"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"vulva sarcoma","secondary_identifiers":["UMLS:C0238525","MEDGEN:65972","DOID:2096","SCTID:254897006"],"synonyms":[{"name":"mammalian vulva sarcoma","type":"exact"},{"name":"sarcoma of mammalian vulva","type":"exact"},{"name":"sarcoma of vulva","type":"exact"},{"name":"vulvar sarcoma","type":"exact"}],"termid":"MONDO:0005214","xrefs":{"Monarch":{"xref_id":"0005214"}}}


id: PBO:0079764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UFD1 antisense RNA 1","termid":"PBO:0079764"}


id: GO:0050400
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + xylitol = ADP + 2 H+ + xylitol 5-phosphate.","definition_xrefs":["RHEA:20209","EC:2.7.1.122"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"xylitol kinase activity","secondary_identifiers":["MetaCyc:XYLITOL-KINASE-RXN","KEGG_REACTION:R02136"],"synonyms":[{"name":"ATP:xylitol 5-phosphotransferase activity","type":"related"},{"name":"xylitol phosphotransferase activity","type":"related"}],"termid":"GO:0050400"}


id: SO:0005857
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tRNA sequence that has a selenocysteine anticodon, and a 3' selenocysteine binding region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"selenocysteine_tRNA_primary_transcript","termid":"SO:0005856"},{"relation_name":"is_a","term_name":"tRNA","termid":"SO:0000253"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenocysteinyl_tRNA","synonyms":[{"name":"selenocysteinyl tRNA","type":"exact"},{"name":"selenocysteinyl-transfer RNA","type":"exact"},{"name":"selenocysteinyl-transfer ribonucleic acid","type":"exact"}],"termid":"SO:0005857"}


id: PBO:0003132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC50 domain protein, implicated in signal transduction (predicted)","termid":"PBO:0003132"}


id: MONDO:0006607
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the sebaceous gland.","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of pilosebaceous unit","termid":"MONDO:0002917"},{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"sebaceous gland disorder","secondary_identifiers":["ICD9:706.1","EFO:1000763","MEDGEN:48599","MESH:D012625","DOID:9098","SCTID:3441005","UMLS:C0036502"],"synonyms":[{"name":"disease of sebaceous gland","type":"exact"},{"name":"disease of sebaceous glands","type":"related"},{"name":"disease or disorder of sebaceous gland","type":"exact"},{"name":"disorder of sebaceous gland","type":"exact"},{"name":"sebaceous gland disease","type":"exact"},{"name":"sebaceous gland disease or disorder","type":"exact"}],"termid":"MONDO:0006607","xrefs":{"Monarch":{"xref_id":"0006607"}}}


id: MONDO:0013236
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial pancreatic carcinoma in which the cause of the disease is a mutation in the PALB2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"familial pancreatic carcinoma","termid":"MONDO:0015278"},{"relation_name":"is_a","term_name":"PALB2-related cancer predisposition","termid":"MONDO:0700272"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pancreatic cancer, susceptibility to, 3","secondary_identifiers":["UMLS:C3150547","MEDGEN:461897","OMIM:613348"],"synonyms":[{"name":"PALB2 familial pancreatic carcinoma","type":"exact"},{"name":"Pnca3","type":"related"},{"name":"familial pancreatic carcinoma caused by mutation in PALB2","type":"exact"},{"name":"pancreatic cancer, susceptibility to, 3","type":"exact"},{"name":"pancreatic cancer, susceptibility to, type 3","type":"exact"},{"name":"susceptibility to pancreatic cancer 3","type":"related"}],"termid":"MONDO:0013236","xrefs":{"Monarch":{"xref_id":"0013236"}}}


id: MONDO:0014385
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any amelogenesis imperfecta in which the cause of the disease is a mutation in the SLC24A4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amelogenesis imperfecta type 2","termid":"MONDO:0015048"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amelogenesis imperfecta hypomaturation type 2A5","secondary_identifiers":["GARD:16028","MEDGEN:863015","UMLS:C4014578","OMIM:615887","DOID:0110063"],"synonyms":[{"name":"AI2A5","type":"exact"},{"name":"SLC24A4 amelogenesis imperfecta","type":"exact"},{"name":"amelogenesis imperfecta caused by mutation in SLC24A4","type":"exact"},{"name":"amelogenesis imperfecta hypomaturation type IIA5","type":"exact"},{"name":"amelogenesis imperfecta type IIA5","type":"exact"},{"name":"amelogenesis imperfecta, hypomaturation type, IIA5","type":"related"},{"name":"amelogenesis imperfecta, type IIA5","type":"exact"}],"termid":"MONDO:0014385","xrefs":{"Monarch":{"xref_id":"0014385"}}}


id: GO:1990582
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. The temporary binding of a protein or protein complex to the membrane of an intracellular membrane-bounded organelle.","definition_xrefs":["PMID:9538255","PMID:16100119"],"gene_count":0,"genotype_count":0,"name":"obsolete intracellular membrane-bounded organelle binding (obsolete GO:1990582)","synonyms":[{"name":"intracellular membrane-bounded organelle binding","type":"exact"},{"name":"intracellular membrane-enclosed organelle binding","type":"exact"}],"termid":"GO:1990582"}


id: GO:0034874
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: thioacetamide S-oxide + O2 + 2 H+ + 2 e- = thioacetamide S,S-dioxide + H2O.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete thioacetamide S-oxide S-oxygenase activity (obsolete GO:0034874)","termid":"GO:0034874"}


id: GO:0015944
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways by which formate is converted to CO2.","definition_xrefs":["MetaCyc:PWY-1881"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formate metabolic process","termid":"GO:0015942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"formate oxidation","synonyms":[{"name":"formic acid oxidation","type":"exact"}],"termid":"GO:0015944"}


id: MONDO:0005853
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm composed of a carcinomatous epithelial component and a sarcomatous mesenchymal component. Representative examples include malignant mixed mesodermal (Mullerian) tumor of the female reproductive system and carcinosarcoma of the salivary gland and the lung.","definition_xrefs":["NCIT:C3729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cancer","termid":"MONDO:0004992"},{"relation_name":"is_a","term_name":"mixed neoplasm","termid":"MONDO:0021043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant mixed neoplasm","secondary_identifiers":["MESH:D018198","ICDO:8940/3","DOID:154","MEDGEN:64618","EFO:1000356","UMLS:C0206625"],"synonyms":[{"name":"malignant mixed cancer","type":"exact"},{"name":"malignant mixed neoplasm","type":"exact"},{"name":"malignant mixed tumor","type":"exact"},{"name":"malignant mixed tumors","type":"related"},{"name":"malignant mixed tumour","type":"exact"},{"name":"malignant mixed tumours","type":"related"},{"name":"mixed cell type cancer","type":"broad"},{"name":"mixed neoplasm","type":"broad"},{"name":"mixed neoplasm, malignant","type":"exact"},{"name":"mixed tumor","type":"broad"},{"name":"mixed tumor, malignant","type":"exact"},{"name":"mixed tumor, malignant (morphologic abnormality)","type":"exact"},{"name":"mixed tumor, malignant, NOS (morphologic abnormality)","type":"exact"},{"name":"mixed tumors, malignant","type":"related"},{"name":"mixed tumour","type":"broad"},{"name":"tumor, malignant mixed","type":"related"},{"name":"tumor, mixed, malignant","type":"exact"},{"name":"tumors, malignant mixed","type":"related"}],"termid":"MONDO:0005853","xrefs":{"Monarch":{"xref_id":"0005853"}}}


id: PBO:0091730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromeric lncRNA nam6","termid":"PBO:0091730"}


id: GO:2000983
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ATP citrate synthase activity.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transferase activity","termid":"GO:0051338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of ATP citrate synthase activity","synonyms":[{"name":"regulation of ATP citrate (pro-S)-lyase activity","type":"exact"},{"name":"regulation of ATP-citrate (pro-S)-lyase activity","type":"exact"},{"name":"regulation of ATP-citrate (pro-S-)-lyase activity","type":"exact"},{"name":"regulation of ATP-citric lyase activity","type":"exact"},{"name":"regulation of ATP:citrate oxaloacetate-lyase ((pro-S)-CH(2)COO(-)->acetyl-CoA) (ATP- dephosphorylating) activity","type":"exact"},{"name":"regulation of ATP:citrate oxaloacetate-lyase [(pro-S)-CH2COO-rightacetyl-CoA] (ATP-dephosphorylating)","type":"related"},{"name":"regulation of acetyl-CoA:oxaloacetate C-acetyltransferase [(pro-S)-carboxymethyl-forming, ADP-phosphorylating]","type":"related"},{"name":"regulation of acetyl-CoA:oxaloacetate acetyltransferase (isomerizing; ADP- phosphorylating) activity","type":"exact"},{"name":"regulation of acetyl-CoA:oxaloacetate acetyltransferase (isomerizing; ADP-phosphorylating)","type":"exact"},{"name":"regulation of adenosine triphosphate citrate lyase activity","type":"exact"},{"name":"regulation of citrate cleavage enzyme activity","type":"related"},{"name":"regulation of citrate-ATP lyase activity","type":"exact"},{"name":"regulation of citric cleavage enzyme activity","type":"related"}],"termid":"GO:2000983"}


id: MOD:00562
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label","definition_xrefs":["PubMed:12766232","Unimod:212"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(2)H deuterium tagged reagent","termid":"MOD:01431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-ethyl iodoacetamide-d5","synonyms":[{"name":"N-ethyl iodoacetamide-d5","type":"related"},{"name":"NEIAA:2H(5)","type":"related"}],"termid":"MOD:00562"}


id: GO:0048150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in the behavior of an organism as a result of an ether stimulus.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adult behavior","termid":"GO:0030534"},{"relation_name":"part_of","term_name":"response to ether","termid":"GO:0045472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"behavioral response to ether","synonyms":[{"name":"behavioural response to ether","type":"exact"}],"termid":"GO:0048150"}


id: MONDO:0016720
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete atypical papilloma of choroid plexus (obsolete MONDO:0016720)","termid":"MONDO:0016720","xrefs":{"Monarch":{"xref_id":"0016720"}}}


id: GO:2000490
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hepatic stellate cell activation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell activation","termid":"GO:0050866"},{"relation_name":"is_a","term_name":"regulation of hepatic stellate cell activation","termid":"GO:2000489"},{"relation_name":"negatively_regulates","term_name":"hepatic stellate cell activation","termid":"GO:0035733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hepatic stellate cell activation","termid":"GO:2000490"}


id: GO:0045855
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of a process in which oskar mRNA is transported to, or maintained in, the oocyte pole plasm.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pole plasm oskar mRNA localization","termid":"GO:0007317"},{"relation_name":"is_a","term_name":"negative regulation of intracellular mRNA localization","termid":"GO:1904581"},{"relation_name":"negatively_regulates","term_name":"pole plasm oskar mRNA localization","termid":"GO:0045451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of pole plasm oskar mRNA localization","synonyms":[{"name":"down regulation of pole plasm oskar mRNA localization","type":"exact"},{"name":"down-regulation of pole plasm oskar mRNA localization","type":"exact"},{"name":"downregulation of pole plasm oskar mRNA localization","type":"exact"},{"name":"inhibition of pole plasm oskar mRNA localization","type":"narrow"},{"name":"negative regulation of oocyte pole plasm oskar mRNA localization","type":"exact"},{"name":"negative regulation of pole plasm oskar mRNA localisation","type":"exact"}],"termid":"GO:0045855"}


id: GO:0044376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of the DNA-directed RNA polymerase II core complex from the cytoplasm into the nucleus.","definition_xrefs":["GOC:jl","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA polymerase II complex import to nucleus (obsolete GO:0044376)","synonyms":[{"name":"DNA-directed RNA polymerase II core complex import into nucleus","type":"exact"},{"name":"DNA-directed RNA polymerase II core complex localization to nucleus","type":"exact"},{"name":"RNA polymerase II complex import into nucleus","type":"exact"},{"name":"RNA polymerase II complex localisation to nucleus","type":"exact"}],"termid":"GO:0044376"}


id: PBO:0085426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Polo-like kinase essential for mitotic cell cycle; controls targeting, activation of Rho1p at cell division site via Rho1p guanine nucleotide exchange factors; regulates shape of nucleus, expansion of nuclear envelope during mitosis; implicated in cell divisions in telomerase-negative strains through adaptation to DNA damage, which allows bypass of cell cycle arrest and contributes senescence-specific genome instability; human homologs PLK1, PLK3 can each complement cdc5 thermosensitive mutants","termid":"PBO:0085426"}


id: FYPO:0000746
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin cortical patch internalization does not occur. Actin cortical patch internalization is the process in which the patch moves from the cell surface to the inside of the cell.","definition_xrefs":["PMID:21620704","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cortical patch internalization","termid":"FYPO:0000743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0004803","FYPO:0001320"],"is_obsolete":false,"name":"abolished actin cortical patch internalization","synonyms":[{"name":"abolished F-actin patch internalization","type":"exact"},{"name":"abolished actin cortical patch internalisation","type":"exact"},{"name":"abolished actin cortical patch internalization during mitotic cell cycle","type":"related"},{"name":"abolished actin cortical patch internalization during vegetative growth","type":"exact"},{"name":"abolished actin patch internalization","type":"exact"},{"name":"actin cortical patch internalization abolished","type":"exact"}],"termid":"FYPO:0000746"}


id: FYPO:0001735
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the movement of an assembled iron-sulfur cluster from a scaffold protein to an acceptor protein is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal iron-sulfur cluster transfer","synonyms":[{"name":"abnormal iron-sulfur cluster transfer during mitotic cell cycle","type":"related"},{"name":"abnormal iron-sulfur cluster transfer during vegetative growth","type":"exact"},{"name":"abnormal iron-sulphur cluster transfer","type":"exact"}],"termid":"FYPO:0001735"}


id: PBO:0025536
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinic aciduria","termid":"PBO:0025536"}


id: GO:0062203
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + peregrinol diphosphate = diphosphate + viteagnusin D.","definition_xrefs":["RHEA:62180","PMID:29315936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"Viteagnusin D synthase activity","termid":"GO:0062203"}


id: PBO:0040497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aurora kinase A","termid":"PBO:0040497"}


id: FYPO:0005363
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic spindle kinetochore microtubule depolymerization, occurs to a lesser extent than normal during mitotic chromosome recapture.","definition_xrefs":["PMID:18256284","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mitotic spindle microtubule depolymerization","termid":"FYPO:0004650"},{"relation_name":"is_a","term_name":"abnormal mitotic metaphase chromosome recapture","termid":"FYPO:0005362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0001320","FYPO:0000054","FYPO:0000641","FYPO:0000337","FYPO:0000138","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased kinetochore microtubule depolymerization during mitotic metaphase chromosome recapture","synonyms":[{"name":"decreased kinetochore microtubule catastrophe during mitotic metaphase chromosome recapture","type":"related"},{"name":"decreased kinetochore microtubule depolymerisation during mitotic metaphase chromosome recapture","type":"exact"},{"name":"decreased kinetochore microtubule depolymerization chromosome recapture during mitotic metaphase","type":"exact"},{"name":"decreased kinetochore microtubule depolymerization during kinetochore retrieval in mitotic metaphase","type":"exact"},{"name":"decreased kinetochore microtubule depolymerization during mitotic metaphase chromosome recapture during vegetative growth","type":"exact"},{"name":"decreased kinetochore microtubule shrinkage during mitotic metaphase chromosome recapture","type":"related"},{"name":"decreased mitotic spindle kinetochore microtubule depolymerization during chromosome recapture","type":"exact"},{"name":"decreased mitotic spindle kinetochore microtubule depolymerization during kinetochore retrieval","type":"exact"},{"name":"decreased mitotic spindle kinetochore microtubule depolymerization during metaphase chromosome retrieval to SPB","type":"exact"},{"name":"decreased mitotic spindle kinetochore microtubule depolymerization during metaphase chromosome retrieval to the spindle pole body","type":"exact"},{"name":"decreased mitotic spindle kinetochore microtubule depolymerization during mitotic metaphase chromosome recapture","type":"exact"},{"name":"decreased mitotic spindle kinetochore microtubule depolymerization during sister kinetochore recapture","type":"exact"},{"name":"reduced kinetochore microtubule depolymerization during mitotic metaphase chromosome recapture","type":"exact"}],"termid":"FYPO:0005363"}


id: SO:0002113
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A lncRNA transcript containing a retained intron.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lncRNA_primary_transcript","termid":"SO:0002035"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA_with_retained_intron","synonyms":[{"name":"lncRNA with retained intron","type":"exact"},{"name":"lncRNA_retained_intron","type":"exact"}],"termid":"SO:0002113"}


id: PR:Q09927
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- aca1 gene.","definition_xrefs":["UniProtKB:Q09927","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-azetidine-2-carboxylic acid acetyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC21E11.04","synonyms":[{"name":"Spom972h-aca1","type":"exact"}],"termid":"PR:Q09927"}


id: PBO:0064012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 46","termid":"PBO:0064012"}


id: GO:0060875
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progession of the lateral semicircular canal from its initial formation to the mature structure.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"semicircular canal development","termid":"GO:0060872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral semicircular canal development","termid":"GO:0060875"}


id: PBO:0068710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 91, pseudogene","termid":"PBO:0068710"}


id: MONDO:0022535
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"carotid artery disorder","termid":"MONDO:0005269"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autonomic facial cephalgia","secondary_identifiers":["ICD9:337.09","MEDGEN:536866","SCTID:230482003","UMLS:C0238902"],"synonyms":[{"name":"Autonomic facial cephalgia","type":"related"},{"name":"Carotidynia","type":"related"},{"name":"Carotodynia","type":"related"},{"name":"carotidynia","type":"exact"}],"termid":"MONDO:0022535","xrefs":{"Monarch":{"xref_id":"0022535"}}}


id: PBO:0076412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 6 like","termid":"PBO:0076412"}


id: FYPO:0000450
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the centromere of a chromosome is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to centromere during vegetative growth","termid":"FYPO:0000449"},{"relation_name":"is_a","term_name":"decreased protein localization to chromosome during vegetative growth","termid":"FYPO:0002839"},{"relation_name":"is_a","term_name":"decreased protein localization to centromere","termid":"FYPO:0006238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to centromere during vegetative growth","synonyms":[{"name":"decreased protein localisation to centromere during vegetative growth","type":"exact"},{"name":"decreased protein localisation to chromosome, centromeric region during vegetative growth","type":"exact"},{"name":"decreased protein localization to centromere during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to chromosome, centric region during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromosome, centromeric region during vegetative growth","type":"exact"},{"name":"reduced protein localization to centromere during vegetative growth","type":"exact"}],"termid":"FYPO:0000450"}


id: PBO:0069961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1255, pseudogene","termid":"PBO:0069961"}


id: GO:0086073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a bundle of His cell to a Purkinje myocyte via adhesion molecules that results in the cells being juxtaposed so that they can communicate.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterotypic cell-cell adhesion","termid":"GO:0034113"},{"relation_name":"is_a","term_name":"cardiac muscle cell-cardiac muscle cell adhesion","termid":"GO:0086042"},{"relation_name":"part_of","term_name":"bundle of His cell to Purkinje myocyte communication","termid":"GO:0086069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"bundle of His cell-Purkinje myocyte adhesion involved in cell communication","termid":"GO:0086073"}


id: GO:0000974
data:
  {"annotated_genes":["SJAG_03993","SJAG_02722","SJAG_01214","SJAG_02844","SJAG_02304","SJAG_02078","SJAG_00446","SJAG_00414","SJAG_04694","SJAG_00859","SJAG_01408","SJAG_00639","SJAG_00094","SJAG_04117","SJAG_00911","SJAG_04497","SJAG_02227","SJAG_04898","SJAG_01504","SJAG_05349","SJAG_03601","SJAG_16453","SJAG_04783","SJAG_05212","SJAG_03711","SJAG_03687","SJAG_01810"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[65013,65535,69998,71614,73539,73791,74874,75211,77822,79232,79670,79709,94113,97984,99489,100255,102505,104840,105014,109001,109479,111076,113136,113595,116846,117823,120774],"is_not":false,"summary":null,"term":"GO:0000974"}]},"cv_name":"cellular_component","definition":"A protein complex consisting of Prp19 and associated proteins that is involved in the transition from the precatalytic spliceosome to the activated form that catalyzes step 1 of splicing, and which remains associated with the spliceosome through the second catalytic step. It is widely conserved, found in both yeast and mammals, though the exact composition varies. In S. cerevisiae, it contains Prp19p, Ntc20p, Snt309p, Isy1p, Syf2p, Cwc2p, Prp46p, Clf1p, Cef1p, and Syf1p.","definition_xrefs":["GOC:krc","PMID:16540691","PMID:19239890"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00094":null,"SJAG_00414":null,"SJAG_00446":null,"SJAG_00639":null,"SJAG_00859":null,"SJAG_00911":null,"SJAG_01214":null,"SJAG_01408":null,"SJAG_01504":null,"SJAG_01810":null,"SJAG_02078":null,"SJAG_02227":null,"SJAG_02304":null,"SJAG_02722":null,"SJAG_02844":null,"SJAG_03601":null,"SJAG_03687":null,"SJAG_03711":null,"SJAG_03993":null,"SJAG_04117":null,"SJAG_04497":null,"SJAG_04694":null,"SJAG_04783":null,"SJAG_04898":null,"SJAG_05212":null,"SJAG_05349":null,"SJAG_16453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Prp19 complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"MOS4-Associated Complex","type":"narrow"},{"name":"NTC","type":"related"},{"name":"Prp19/CDC5 complex","type":"narrow"},{"name":"nineteen complex","type":"narrow"}],"termid":"GO:0000974","terms_by_termid":{"GO:0000974":null}}


id: PBO:0041809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium responsive transcription factor","termid":"PBO:0041809"}


id: PBO:0084109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Heat shock protein of the Hsp70 family; localized in mitochondrial nucleoids, plays a role in protein translocation, interacts with Mge1p in an ATP-dependent manner; overexpression induces extensive mitochondrial DNA aggregations; ECM10 has a paralog, SSC1, that arose from the whole genome duplication","termid":"PBO:0084109"}


id: PBO:0014236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA family ATPase involved in ubiquitin-mediated protein degradation Cdc48","termid":"PBO:0014236"}


id: PBO:0044365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 55","termid":"PBO:0044365"}


id: PBO:0062282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily J member 2","termid":"PBO:0062282"}


id: PBO:0002640
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.5.1.19","termid":"PBO:0002640"}


id: PBO:0079264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 36","termid":"PBO:0079264"}


id: PR:000036978
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the ras1 gene in Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras-like protein 1 (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC17H9.09c","synonyms":[{"name":"SPAC17H9.09c","type":"related"},{"name":"Spom-ras1","type":"exact"}],"termid":"PR:000036978"}


id: GO:0047188
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-hydroxy-4-aminobiphenyl + N-hydroxy-4-acetylaminonbiphenyl = N-acetoxy-4-aminobiphenyl + N-hydroxy-4-aminobiphenyl.","definition_xrefs":["MetaCyc:2.3.1.56-RXN","EC:2.3.1.56"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"aromatic-hydroxylamine O-acetyltransferase activity","secondary_identifiers":["RHEA:20325"],"synonyms":[{"name":"N,O-acetyltransferase activity","type":"related"},{"name":"N-hydroxy-2-acetylaminofluorene N-O acyltransferase activity","type":"related"},{"name":"N-hydroxy-4-acetylaminobiphenyl:N-hydroxy-4-aminobiphenyl O-acetyltransferase activity","type":"related"},{"name":"aromatic hydroxylamine acetyltransferase activity","type":"related"},{"name":"arylhydroxamate acyltransferase activity","type":"related"},{"name":"arylhydroxamic acid N,O-acetyltransferase activity","type":"related"},{"name":"arylhydroxamic acyltransferase activity","type":"related"}],"termid":"GO:0047188"}


id: PR:P40381
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- swi6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P40381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin-associated protein swi6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC664.01c","synonyms":[{"name":"Spom972h-swi6","type":"exact"}],"termid":"PR:P40381"}


id: MONDO:1011497
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ehlers-Danlos syndrome that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome, non-human animal","termid":"MONDO:1011425"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ehlers-Danlos syndrome, sheep","secondary_identifiers":["OMIA:000327-9940"],"termid":"MONDO:1011497","xrefs":{"Monarch":{"xref_id":"1011497"}}}


id: PBO:0060420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetylated alpha-linked acidic dipeptidase like 1","termid":"PBO:0060420"}


id: PBO:0039025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with GTPase domain, ankyrin repeat and PH domain 2","termid":"PBO:0039025"}


id: PBO:0065244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 15 like","termid":"PBO:0065244"}


id: GO:1901050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of atropine.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"gene_count":0,"genotype_count":0,"name":"obsolete atropine catabolic process (obsolete GO:1901050)","synonyms":[{"name":"atropine breakdown","type":"exact"},{"name":"atropine catabolism","type":"exact"},{"name":"atropine degradation","type":"exact"}],"termid":"GO:1901050"}


id: PBO:0039501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 24","termid":"PBO:0039501"}


id: MONDO:0019420
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked intellectual disability, Pai type is characterized by the association of dysmorphism with intellectual deficit. It has been described in four generations of one family. Premature death was reported in the affected males. Transmission is X-linked recessive and the causative gene has been localized to the q28 region of the X chromosome.","definition_xrefs":["Orphanet:85322"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"X-linked intellectual disability, Pai type","secondary_identifiers":["MEDGEN:930695","GARD:19056","UMLS:C4305026","SCTID:719011002"],"termid":"MONDO:0019420","xrefs":{"Monarch":{"xref_id":"0019420"}}}


id: GO:1905413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of dense core granule exocytosis.","definition_xrefs":["PMID:18468511","GO_REF:0000058","GOC:PARL","GOC:TermGenie","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of calcium ion-dependent exocytosis","termid":"GO:0017158"},{"relation_name":"regulates","term_name":"dense core granule exocytosis","termid":"GO:1990504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"regulation of dense core granule exocytosis","synonyms":[{"name":"regulation of dense core vesicle exocytosis","type":"exact"}],"termid":"GO:1905413"}


id: PBO:0072728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ryanodine receptor 3","termid":"PBO:0072728"}


id: MONDO:0020067
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute infectious process that affects the brain tissue. It is usually caused by viruses and less often by bacteria, parasites, and fungi.","definition_xrefs":["NCIT:C79550"],"direct_ancestors":[{"relation_name":"is_a","term_name":"encephalitis","termid":"MONDO:0019956"},{"relation_name":"is_a","term_name":"central nervous system infectious disorder","termid":"MONDO:0024619"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infectious encephalitis","secondary_identifiers":["MEDGEN:108917","MESH:D000069544","ICD9:049.8","UMLS:C0596773","SCTID:312215006","ICD9:323.4"],"synonyms":[{"name":"encephalitis infection","type":"exact"}],"termid":"MONDO:0020067","xrefs":{"Monarch":{"xref_id":"0020067"}}}


id: PBO:0060061
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 8","termid":"PBO:0060061"}


id: GO:0006731
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving coenzymes and prosthetic groups.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete coenzyme and prosthetic group metabolic process (obsolete GO:0006731)","synonyms":[{"name":"coenzyme and prosthetic group metabolic process","type":"exact"}],"termid":"GO:0006731"}


id: PBO:0113045
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chromatin remodeler that regulates various aspects of transcription; acts in conjunction with Isw1b to regulate chromatin structure, maintain chromatin integrity during transcription elongation by RNAP II by preventing trans-histone exchange over coding regions; contains chromo domain, helicase domain and DNA-binding domain; component of both SAGA and SLIK complexes; in human, deletion of CHD1 is a frequent event in prostate cancer","termid":"PBO:0113045"}


id: GO:0003370
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id: PBO:0074384
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMG6 intronic transcript 1","termid":"PBO:0074384"}


id: PBO:0066218
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id: GO:0005136
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id: GO:0090690
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id: GO:0002074
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id: GO:0018379
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id: PBO:0051556
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 10 receptor subunit alpha","termid":"PBO:0051556"}


id: GO:0031966
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id: PBO:0018172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smc5-6 complex ubiquitin-protein ligase E3 subunit 1","termid":"PBO:0018172"}


id: GO:0002803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of antibacterial peptide production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antimicrobial peptide production","termid":"GO:0002225"},{"relation_name":"is_a","term_name":"regulation of antibacterial peptide production","termid":"GO:0002786"},{"relation_name":"is_a","term_name":"positive regulation of defense response to bacterium","termid":"GO:1900426"},{"relation_name":"positively_regulates","term_name":"antibacterial peptide production","termid":"GO:0002778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of antibacterial peptide production","synonyms":[{"name":"activation of antibacterial peptide production","type":"narrow"},{"name":"stimulation of antibacterial peptide production","type":"narrow"},{"name":"up regulation of antibacterial peptide production","type":"exact"},{"name":"up-regulation of antibacterial peptide production","type":"exact"},{"name":"upregulation of antibacterial peptide production","type":"exact"}],"termid":"GO:0002803"}


id: MONDO:0010226
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"46,XY complete gonadal dysgenesis","termid":"MONDO:0010765"},{"relation_name":"is_a","term_name":"46,XY partial gonadal dysgenesis","termid":"MONDO:0016674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"46,XY sex reversal 2","secondary_identifiers":["NANDO:1200404","MEDGEN:341190","GARD:9159","MESH:C535601","OMIM:300018","DOID:0111777","UMLS:C1848296"],"synonyms":[{"name":"46,XY SEX reversal 2","type":"related"},{"name":"46,XY Sex reversal type 2","type":"exact"},{"name":"46,XY Sex reversal, Dax1-related","type":"related"},{"name":"46,XY sex reversal 2","type":"exact"},{"name":"46XY sex reversal 2, dosage-sensitive","type":"exact"},{"name":"SRXY2","type":"related"},{"name":"dosage-sensitive Sex reversal","type":"related"}],"termid":"MONDO:0010226","xrefs":{"Monarch":{"xref_id":"0010226"}}}


id: MONDO:0012106
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive primary microcephaly in which the cause of the disease is a mutation in the ASPM gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive primary microcephaly","termid":"MONDO:0016660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0006025"],"is_obsolete":false,"name":"microcephaly 5, primary, autosomal recessive","secondary_identifiers":["MESH:C563871","MEDGEN:373344","OMIM:608716","UMLS:C1837501","GARD:15441","DOID:0070280"],"synonyms":[{"name":"ASPM autosomal recessive primary microcephaly","type":"exact"},{"name":"MCPH5","type":"related"},{"name":"autosomal recessive primary microcephaly caused by mutation in ASPM","type":"exact"},{"name":"microcephaly 5, primary, autosomal recessive","type":"exact"}],"termid":"MONDO:0012106","xrefs":{"Monarch":{"xref_id":"0012106"}}}


id: PBO:0051920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit beta 3 binding protein","termid":"PBO:0051920"}


id: GO:0060468
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The negative regulation of fertilization process that takes place as part of egg activation, ensuring that only a single sperm fertilizes the egg.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of fertilization","termid":"GO:0060467"},{"relation_name":"part_of","term_name":"egg activation","termid":"GO:0007343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prevention of polyspermy","synonyms":[{"name":"negative regulation of fertilization involved in egg activation","type":"exact"},{"name":"polyspermy block","type":"exact"}],"termid":"GO:0060468"}


id: GO:0008455
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + alpha-D-mannosyl-1,6-(N-acetyl-beta-D-glucosaminyl-1,2-alpha-D-mannosyl-1,3)-beta-D-mannosyl-R = UDP + N-acetyl-beta-D-glucosaminyl-1,2-alpha-D-mannosyl-1,6-(N-acetyl-beta-D-glucosaminyl-1,2-alpha-D-mannosyl-1,3)-beta-D-mannosyl-R.","definition_xrefs":["EC:2.4.1.143"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a glycoprotein","termid":"GO:0140103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003674","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity","secondary_identifiers":["Reactome:R-HSA-9694656","Reactome:R-HSA-975829","Reactome:R-HSA-4793955","MetaCyc:2.4.1.143-RXN","RHEA:12941"],"synonyms":[{"name":"GnTII activity","type":"related"},{"name":"N-acetylglucosaminyltransferase II activity","type":"related"},{"name":"N-glycosyl-oligosaccharide-glycoprotein N-acetylglucosaminyltransferase II activity","type":"related"},{"name":"UDP-GlcNAc:mannoside alpha-(1,6) acetylglucosaminyltransferase activity","type":"related"},{"name":"UDP-GlcNAc:mannoside alpha-1,6 acetylglucosaminyltransferase activity","type":"related"},{"name":"UDP-N-acetyl-D-glucosamine:6-(alpha-D-mannosyl)-beta-D-mannosyl-glycoprotein 2-beta-N-acetyl-D-glucosaminyltransferase activity","type":"related"},{"name":"acetylglucosaminyltransferase II activity","type":"related"},{"name":"alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase activity","type":"related"},{"name":"alpha-1,6-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase activity","type":"related"},{"name":"alpha-1,6-mannosylglycoprotein beta-1,2-N-acetylglucosaminyltransferase activity","type":"exact"},{"name":"uridine diphosphoacetylglucosamine-alpha-1,6-mannosylglycoprotein beta-1,2-N-acetylglucosaminyltransferase activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine-alpha-D-mannoside beta(1,2)-acetylglucosaminyltransferase activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine-alpha-D-mannoside beta-1,2-acetylglucosaminyltransferase activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine-mannoside alpha(1,6)-acetylglucosaminyltransferase activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine-mannoside alpha-1,6-acetylglucosaminyltransferase activity","type":"related"}],"termid":"GO:0008455"}


id: GO:0160054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of microfibril.","definition_xrefs":["PMID:32855533"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"supramolecular fiber organization","termid":"GO:0097435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"microfibril assembly","termid":"GO:0160054"}


id: GO:0030506
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to ankyrin, a 200 kDa cytoskeletal protein that attaches other cytoskeletal proteins to integral membrane proteins.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal protein binding","termid":"GO:0008092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008092"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488","GO:0008092"],"is_obsolete":false,"name":"ankyrin binding","termid":"GO:0030506"}


id: GO:0017169
data:
  {"annotated_genes":["SJAG_01233","SJAG_00168","SJAG_00999","SJAG_04319"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73002],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008444"},{"annotations":[78415],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003881"},{"annotations":[68748],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003882"},{"annotations":[94874],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004142"},{"annotations":[94875],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004307"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: CDP + alcohol = CMP + phosphatidyl alcohol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00168":null,"SJAG_00999":null,"SJAG_01233":null,"SJAG_04319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016780","GO:0016740"],"is_obsolete":false,"name":"CDP-alcohol phosphatidyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0017169","terms_by_termid":{"GO:0003881":null,"GO:0003882":null,"GO:0004142":null,"GO:0004307":null,"GO:0008444":null}}


id: MONDO:0016915
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of chromosome 17","termid":"MONDO:0016879"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial deletion of the long arm of chromosome 17","secondary_identifiers":["UMLS:C5679727","GARD:20836","icd11.foundation:186065235","MEDGEN:1826046","Orphanet:262137"],"synonyms":[{"name":"partial deletion of chromosome 17q","type":"exact"},{"name":"partial deletion of the long arm of chromosome type 17","type":"exact"},{"name":"partial monosomy of chromosome 17q","type":"exact"},{"name":"partial monosomy of the long arm of chromosome 17","type":"exact"}],"termid":"MONDO:0016915","xrefs":{"Monarch":{"xref_id":"0016915"}}}


id: GO:1990524
data:
  {"annotated_genes":["SJAG_07008"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[111572],"is_not":false,"summary":null,"term":"GO:1990524"}]},"cv_name":"cellular_component","definition":"A protein complex located in the inner membrane of mitochondria that is involved in the assembly of the peripheral (or stator) stalk of the mitochondrial proton-transporting ATP synthase (also known as the F1F0 ATP synthase). In budding yeast, this complex includes Ina22p and Ina17p.","definition_xrefs":["GOC:rn","PMID:24942160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner mitochondrial membrane protein complex","termid":"GO:0098800"}],"gene_count":1,"genes_by_uniquename":{"SJAG_07008":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005739","GO:0005737"],"is_obsolete":false,"name":"INA complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"INAC","type":"exact"}],"termid":"GO:1990524","terms_by_termid":{"GO:1990524":null}}


id: PBO:0054307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1699","termid":"PBO:0054307"}


id: PBO:0061821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OFD1 pseudogene 11 Y-linked","termid":"PBO:0061821"}


id: _global:processed_into
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"X is processed_into Y if a region X is modified to create Y.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"processed_into","termid":"_global:processed_into"}


id: FYPO:0005507
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature ribosomal RNA (rRNA) measured in a cell is higher than normal. Total rRNA or a specific rRNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered mature rRNA level during vegetative growth","termid":"FYPO:0006468"},{"relation_name":"is_a","term_name":"increased ncRNA level during vegetative growth","termid":"FYPO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased mature rRNA level","synonyms":[{"name":"increased mature rRNA accumulation","type":"related"},{"name":"increased mature rRNA level during mitotic cell cycle","type":"related"},{"name":"increased mature rRNA level during vegetative growth","type":"exact"},{"name":"increased mature rRNA transcript level","type":"broad"},{"name":"increased mature ribosomal RNA level","type":"exact"},{"name":"increased rRNA level","type":"broad"}],"termid":"FYPO:0005507"}


id: PBO:0086256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that regulates Arf1p, Arf2p to facilitate Golgi trafficking; binds phosphatidylinositol 4-phosphate, which plays a role in TGN localization; has homology to gamma-adaptin; GGA2 has a paralog, GGA1, that arose from the whole genome duplication","termid":"PBO:0086256"}


id: GO:0016546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process during courtship where the male fly licks the genitalia of a stationary female fly with his proboscis. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","PMID:11092827"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male courtship behavior","termid":"GO:0008049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male courtship behavior, proboscis-mediated licking","synonyms":[{"name":"male courtship behavior, licking","type":"related"},{"name":"male courtship behaviour, licking","type":"related"},{"name":"male courtship behaviour, proboscis-mediated licking","type":"exact"}],"termid":"GO:0016546"}


id: PBO:0049180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gremlin 1, DAN family BMP antagonist","termid":"PBO:0049180"}


id: PBO:0054434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1830","termid":"PBO:0054434"}


id: SO:0002221
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A regulatory_region including the Transcription Start Site (TSS) of a gene and serving as a platform for Pre-Initiation Complex (PIC) assembly, enabling transcription of a gene under certain conditions.","direct_ancestors":[{"relation_name":"is_a","term_name":"promoter","termid":"SO:0000167"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic_promoter","synonyms":[{"name":"Eukaryotic promoter","type":"exact"}],"termid":"SO:0002221"}


id: PBO:0061598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUAK family kinase 2","termid":"PBO:0061598"}


id: PBO:0039769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aquaporin 4","termid":"PBO:0039769"}


id: FYPO:0007114
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the amount, distribution, and morphology of microtubule bundles are normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component","termid":"FYPO:0001233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal microtubule bundle","synonyms":[{"name":"normal MT bundle","type":"exact"},{"name":"normal microtubule array","type":"related"},{"name":"normal microtubule bundle physical object quality","type":"exact"}],"termid":"FYPO:0007114"}


id: MONDO:0060621
data:
  {"annotated_genes":["SJAG_00443"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86854],"is_not":false,"summary":null,"term":"MONDO:0060621"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00443":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with microcephaly, seizures, and cortical atrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:617802","UMLS:C4540493","EFO:0009644","MEDGEN:1615361"],"synonyms":[{"name":"NDMSCA","type":"related"},{"name":"neurodevelopmental disorder with microcephaly, seizures, and cortical atrophy","type":"exact"}],"termid":"MONDO:0060621","terms_by_termid":{"MONDO:0060621":null},"xrefs":{"Monarch":{"xref_id":"0060621"}}}


id: GO:0060487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of an epithelial cell that contributes to the epithelium of the lung.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation","termid":"GO:0030855"},{"relation_name":"is_a","term_name":"lung cell differentiation","termid":"GO:0060479"},{"relation_name":"part_of","term_name":"lung epithelium development","termid":"GO:0060428"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung epithelial cell differentiation","synonyms":[{"name":"pulmonary epithelial cell differentiation","type":"related"}],"termid":"GO:0060487"}


id: GO:0062058
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a transcription factor TFIIH holo complex.","definition_xrefs":["PMID:11259578"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"transcription factor TFIIH holo complex binding","termid":"GO:0062058"}


id: GO:0044833
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any viral process that modulates the frequency, rate or extent of protein transport in its host organism.","definition_xrefs":["PMID:22334672","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by virus of host protein transport (obsolete GO:0044833)","termid":"GO:0044833"}


id: PATO:0001802
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A pattern quality inhering in a bearer by virtue of the bearer's not being compact or dense in arrangement.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"irregular spatial pattern","termid":"PATO:0000330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"loose","termid":"PATO:0001802"}


id: GO:0008309
data:
  {"annotated_genes":["SJAG_01648","SJAG_02298","SJAG_01832","SJAG_05373"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74933,90367],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008311"},{"annotations":[98940,109594],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051908"}]},"cv_name":"molecular_function","definition":"Catalysis of the sequential cleavage of mononucleotides from a free 5' or 3' terminus of a double-stranded DNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA exonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016895"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01648":null,"SJAG_01832":null,"SJAG_02298":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0140097","GO:0003824","GO:0003674","GO:0016787","GO:0004527"],"is_obsolete":false,"name":"double-stranded DNA exodeoxyribonuclease activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"double-stranded DNA specific exodeoxyribonuclease activity","type":"related"}],"termid":"GO:0008309","terms_by_termid":{"GO:0008311":null,"GO:0051908":null}}


id: PBO:0081737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 668","termid":"PBO:0081737"}


id: PBO:0044319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c1","termid":"PBO:0044319"}


id: MONDO:0975747
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 95","secondary_identifiers":["DOID:0070594","OMIM:620917"],"termid":"MONDO:0975747","xrefs":{"Monarch":{"xref_id":"0975747"}}}


id: PBO:0113024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Calcium/H+ antiporter localized to endoplasmic reticulum membrane; member of calcium exchanger (CAX) family; targeted to vacuole via AP-3 pathway","termid":"PBO:0113024"}


id: MONDO:0015555
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"maculopapular cutaneous mastocytosis","termid":"MONDO:0019316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"plaque-form urticaria pigmentosa","secondary_identifiers":["Orphanet:158769","GARD:20034","MEDGEN:1843438","UMLS:C5680682"],"termid":"MONDO:0015555","xrefs":{"Monarch":{"xref_id":"0015555"}}}


id: GO:0099590
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A receptor-mediated endocytosis process that results in the internalization of a neurotransmitter receptor.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor internalization","termid":"GO:0031623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"neurotransmitter receptor internalization","termid":"GO:0099590"}


id: PBO:0068581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 32, pseudogene","termid":"PBO:0068581"}


id: GO:1903115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of actin filament-based movement.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24798735"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin filament-based process","termid":"GO:0032970"},{"relation_name":"regulates","term_name":"actin filament-based movement","termid":"GO:0030048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of actin filament-based movement","termid":"GO:1903115"}


id: MONDO:0011091
data:
  {"annotated_genes":["SJAG_01352"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87860],"is_not":false,"summary":null,"term":"MONDO:0011091"}]},"cv_name":"mondo","definition":"Autosomal dominant Charcot-Marie-Tooth disease type 2D (CMT2D) is a form of axonal Charcot-Marie-Tooth disease, a peripheral sensorimotor neuropathy, characterized by distal weakness primarily and predominantly occurring in the upper limbs and tendon reflexes absent or reduced in the arms and decreased in the legs. Progression is slow.","definition_xrefs":["Orphanet:99938"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 2","termid":"MONDO:0018993"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01352":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease type 2D","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:1617529678","OMIM:601472","GARD:1251","MESH:C537993","SCTID:717011006","UMLS:C1832274","MEDGEN:316946","NCIT:C122659","DOID:0110164"],"synonyms":[{"name":"CMT 2D","type":"related"},{"name":"CMT2D","type":"exact"},{"name":"Charcot Marie Tooth disease type 2D","type":"related"},{"name":"Charcot-Marie-Tooth disease neuronal type 2D","type":"exact"},{"name":"Charcot-Marie-Tooth disease type 2 caused by mutation in GARS","type":"exact"},{"name":"Charcot-Marie-Tooth disease, axonal, type 2D","type":"related"},{"name":"Charcot-Marie-Tooth disease, neuronal, type 2D","type":"related"},{"name":"Charcot-Marie-Tooth disease, type 2D","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy type 2D","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, type 2D","type":"related"},{"name":"GARS Charcot-Marie-Tooth disease type 2","type":"exact"},{"name":"autosomal dominant Charcot-Marie-Tooth disease type 2D","type":"exact"}],"termid":"MONDO:0011091","terms_by_termid":{"MONDO:0011091":null},"xrefs":{"Monarch":{"xref_id":"0011091"}}}


id: MONDO:0006004
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation in the nasal cavity mucosa that results from the abnormal regulation of the blood flow in the nose. It may be caused by temperature fluctuations, air pollution, strong odors, and tobacco smoke. It results in chronic nasal congestion, sneezing, and running nose.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"allergic rhinitis","termid":"MONDO:0011786"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"vasomotor rhinitis","secondary_identifiers":["EFO:0007533","MESH:D012223","icd11.foundation:1286636442","SCTID:8229003","NCIT:C34988","UMLS:C0035460","DOID:4730","ICD10CM:J30.0","MEDGEN:11229"],"termid":"MONDO:0006004","xrefs":{"Monarch":{"xref_id":"0006004"}}}


id: PBO:0083571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified ORF NDC1/YML031W","termid":"PBO:0083571"}


id: GO:0036372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of an opsin (a G protein-coupled receptor of photoreceptor cells) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.","definition_xrefs":["PMID:22855808","GOC:atm","PMID:20238016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transport","termid":"GO:0015031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"opsin transport","synonyms":[{"name":"ciliary transport of opsin","type":"narrow"}],"termid":"GO:0036372"}


id: PBO:0017857
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrolysis rate of maltose to glucose is 14.5 (uM min-1 ml-2)","termid":"PBO:0017857"}


id: GO:0044449
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a contractile fiber, a fiber composed of actin, myosin, and associated proteins, found in cells of smooth or striated muscle.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete contractile fiber part (obsolete GO:0044449)","synonyms":[{"name":"contractile fibre component","type":"exact"},{"name":"muscle fiber component","type":"broad"},{"name":"muscle fibre component","type":"broad"}],"termid":"GO:0044449"}


id: GO:0005109
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a frizzled (fz) receptor.","definition_xrefs":["GOC:ceb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"frizzled binding","secondary_identifiers":["GO:0005110"],"synonyms":[{"name":"frizzled ligand","type":"narrow"},{"name":"frizzled-2 binding","type":"narrow"},{"name":"frizzled-2 ligand","type":"narrow"},{"name":"fz binding","type":"exact"},{"name":"fz ligand","type":"narrow"},{"name":"fz2 binding","type":"narrow"},{"name":"fz2 ligand","type":"narrow"}],"termid":"GO:0005109"}


id: SO:0001926
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-coding RNA transcript, derived from the transcription of the telomere. These transcripts are antisense of ARRET transcripts.","definition_xrefs":["PMID:22139915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomeric_transcript","termid":"SO:0001927"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anti_ARRET","synonyms":[{"name":"anti-ARRET","type":"exact"}],"termid":"SO:0001926"}


id: GO:0098656
data:
  {"annotated_genes":["SJAG_00048","SJAG_01168","SJAG_02463","SJAG_03401","SJAG_01973"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59598],"is_not":false,"summary":null,"term":"GO:0098656"},{"annotations":[78969,72159,75153],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902476"},{"annotations":[115604],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140116"}]},"cv_name":"biological_process","definition":"The process in which a monoatomic anion is transported across a membrane. Monatomic anions (also called simple anions) are negatively charged ions consisting of exactly one atom.","definition_xrefs":["GOC:dos","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic anion transport","termid":"GO:0006820"},{"relation_name":"is_a","term_name":"monoatomic ion transmembrane transport","termid":"GO:0034220"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00048":null,"SJAG_01168":null,"SJAG_01973":null,"SJAG_02463":null,"SJAG_03401":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"monoatomic anion transmembrane transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0099133"],"synonyms":[{"name":"ATP hydrolysis coupled anion transmembrane transport","type":"narrow"},{"name":"anion transmembrane transport","type":"exact"}],"termid":"GO:0098656","terms_by_termid":{"GO:0098656":null,"GO:0140116":null,"GO:1902476":null}}


id: MONDO:0017837
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Multiple sclerosis-ichthyosis-factor VIII deficiency syndrome is characterized by the association of multiple sclerosis with lamellar ichthyosis and hematological anomalies (beta thalassemia minor and a quantitative deficit of factor VIII-von Willebrand complex). Other clinical manifestations may include eye involvement (optic atrophy, diplopia), neuromuscular involvement (ataxia, pyramidal syndrome, gait disturbance) and sensory disorder. There have been no further descriptions in the literature since 1992.","definition_xrefs":["Orphanet:3151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coagulation protein disease","termid":"MONDO:0002242"},{"relation_name":"is_a","term_name":"hemorrhagic disease","termid":"MONDO:0002243"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"multiple sclerosis-ichthyosis-factor VIII deficiency syndrome","secondary_identifiers":["GARD:18787","MEDGEN:1391655","UMLS:C4518551"],"termid":"MONDO:0017837","xrefs":{"Monarch":{"xref_id":"0017837"}}}


id: PBO:0075541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speedy/RINGO cell cycle regulator family member E21","termid":"PBO:0075541"}


id: PBO:0058051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4272","termid":"PBO:0058051"}


id: PBO:0041690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcitonin pseudogene","termid":"PBO:0041690"}


id: GO:0072596
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a protein to a specific location in a chloroplast.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of protein localization to organelle","termid":"GO:0072594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"establishment of protein localization to chloroplast","synonyms":[{"name":"establishment of protein localisation to chloroplast","type":"exact"}],"termid":"GO:0072596"}


id: PBO:0036339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claspin, Mrc1","termid":"PBO:0036339"}


id: PBO:0077166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TLE family member 7","termid":"PBO:0077166"}


id: SO:0000766
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tRNA sequence that has a pyrrolysine anticodon, and a 3' pyrrolysine binding region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"pyrrolysine_tRNA_primary_transcript","termid":"SO:0001178"},{"relation_name":"is_a","term_name":"tRNA","termid":"SO:0000253"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyrrolysyl_tRNA","synonyms":[{"name":"pyrrolysyl tRNA","type":"exact"},{"name":"pyrrolysyl-transfer RNA","type":"exact"},{"name":"pyrrolysyl-transfer ribonucleic acid","type":"exact"}],"termid":"SO:0000766"}


id: PBO:0052643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 11","termid":"PBO:0052643"}


id: GO:0043732
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-hydroxynicotinate + H2O + O2 = 2,6-dihydroxynicotinate + H2O2.","definition_xrefs":["RHEA:22808","EC:1.17.3.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups, oxygen as acceptor","termid":"GO:0016727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"6-hydroxynicotinate dehydrogenase activity","secondary_identifiers":["MetaCyc:RXN-7585","KEGG_REACTION:R07221"],"synonyms":[{"name":"6-hydroxynicotinate hydroxylase activity","type":"related"},{"name":"6-hydroxynicotinate:O2 oxidoreductase activity","type":"related"},{"name":"6-hydroxynicotinic acid dehydrogenase activity","type":"related"},{"name":"6-hydroxynicotinic acid hydroxylase activity","type":"related"}],"termid":"GO:0043732"}


id: PBO:0053225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"legumain","termid":"PBO:0053225"}


id: FYPO:0007134
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which septation initiation network signaling is normal (i.e. indistinguishable from wild type). SIN signaling is mediated by the small GTPase Ras, and results in the initiation of contraction of the contractile ring at the beginning of cytokinesis and cell division by septum formation.","definition_xrefs":["PomBase:mah","GO:0031028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"cellular response phenotype during vegetative growth","termid":"FYPO:0001342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000298","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal septation initiation network signaling","synonyms":[{"name":"normal SIN signaling","type":"exact"},{"name":"normal SIN signalling","type":"exact"},{"name":"normal septation initiation network signaling during mitotic cell cycle","type":"related"},{"name":"normal septation initiation network signaling during vegetative growth","type":"exact"},{"name":"normal septation initiation network signalling","type":"exact"},{"name":"normal septation initiation signaling","type":"exact"}],"termid":"FYPO:0007134"}


id: PBO:0027522
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_response_to_cytokinesis_checkpoint_signaling","termid":"PBO:0027522"}


id: MONDO:0100519
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy, idiopathic generalized, susceptibility to, 17","secondary_identifiers":["MEDGEN:1794141","UMLS:C5561931","OMIM:602477"],"synonyms":[{"name":"EIG17","type":"exact"}],"termid":"MONDO:0100519","xrefs":{"Monarch":{"xref_id":"0100519"}}}


id: GO:0006292
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The location of pyrimidine dimers by a large multienzyme complex that scans the DNA for distortions in the double helix caused by pyrimidine dimers.","definition_xrefs":["ISBN:0815316194"],"gene_count":0,"genotype_count":0,"name":"obsolete pyrimidine-dimer repair, DNA damage recognition (obsolete GO:0006292)","synonyms":[{"name":"pyrimidine-dimer repair, DNA damage recognition","type":"exact"}],"termid":"GO:0006292"}


id: PBO:0120324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRPK2 antisense RNA 1","termid":"PBO:0120324"}


id: PBO:0001174
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.4.16","termid":"PBO:0001174"}


id: PATO:0000838
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000838 absolute auditory ability value (obsolete PATO:0000838)","termid":"PATO:0000838"}


id: MONDO:0009411
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autoimmune polyendocrinopathy type 1, or APECED syndrome, is a genetic disease that manifests in childhood or early adolescence with a combination of chronic mucocutaneous candidiasis, hypoparathyroidism and autoimmune adrenal failure.","definition_xrefs":["Orphanet:3453"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete acquired chronic primary adrenal insufficiency (obsolete MONDO:0015130)","termid":"MONDO:0015130"},{"relation_name":"excluded_subClassOf","term_name":"acquired primary ovarian failure","termid":"MONDO:0019851"},{"relation_name":"is_a","term_name":"adrenal gland disorder","termid":"MONDO:0005495"},{"relation_name":"is_a","term_name":"hereditary hypoparathyroidism","termid":"MONDO:0016165"},{"relation_name":"is_a","term_name":"autoimmune polyendocrinopathy","termid":"MONDO:0017278"},{"relation_name":"is_a","term_name":"autoimmune hypoparathyroidism","termid":"MONDO:0018242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"autoimmune polyendocrine syndrome type 1","secondary_identifiers":["UMLS:C0085859","NANDO:2200346","DOID:0050167","OMIM:240300","NANDO:2200738","ICD9:258.8","NORD:798","GARD:8466","MEDGEN:39125","NCIT:C129727","SCTID:11244009"],"synonyms":[{"name":"AIRE autoimmune polyendocrinopathy","type":"exact"},{"name":"APECED syndrome","type":"exact"},{"name":"APS 1","type":"related"},{"name":"APS type 1","type":"exact"},{"name":"APS1","type":"exact"},{"name":"Autoimmune Polyglandular Syndrome Type 1","type":"exact"},{"name":"MEDAC syndrome","type":"exact"},{"name":"PGA 1","type":"related"},{"name":"Whitaker syndrom","type":"exact"},{"name":"Whitaker syndrome","type":"related"},{"name":"aire autoimmune polyendocrinopathy","type":"exact"},{"name":"autoimmune hypoparathyroidism-chronic candidiasis-Addison disease syndrome","type":"exact"},{"name":"autoimmune polyendocrine syndrome type 1","type":"exact"},{"name":"autoimmune polyendocrine syndrome, type I, with or without reversible metaphyseal dysplasia","type":"related"},{"name":"autoimmune polyendocrinopathy caused by mutation in AIRE","type":"exact"},{"name":"autoimmune polyendocrinopathy caused by mutation in aire","type":"exact"},{"name":"autoimmune polyendocrinopathy syndrome , type I, with or without reversible metaphyseal dysplasia","type":"exact"},{"name":"autoimmune polyendocrinopathy syndrome type 1","type":"related"},{"name":"autoimmune polyendocrinopathy syndrome, type I, autosomal dominant","type":"related"},{"name":"autoimmune polyendocrinopathy type 1","type":"related"},{"name":"autoimmune polyendocrinopathy-candidiasis-ectodermal dystrophy","type":"exact"},{"name":"autoimmune polyendocrinopathy-candidiasis-ectodermal dystrophy (APECED)","type":"related"},{"name":"autoimmune polyendocrinopathy-candidiasis-ectodermal dystrophy syndrome","type":"exact"},{"name":"autoimmune polyglandular syndrome I","type":"exact"},{"name":"autoimmune polyglandular syndrome type 1","type":"exact"},{"name":"autoimmune polyglandular syndrome, type 1","type":"related"},{"name":"ham syndrome","type":"exact"},{"name":"hypoadrenocorticism with hypoparathyroidism and superficial Moniliasis","type":"related"},{"name":"hypoparathyroidism-Addison disease-mucocutaneous candidiasis syndrome","type":"exact"},{"name":"multiple endocrine deficiency-Addison disease-candidiasis syndrome","type":"exact"},{"name":"polyglandular autoimmune syndrome type 1","type":"exact"},{"name":"polyglandular autoimmune syndrome, type 1","type":"related"},{"name":"polyglandular deficiency syndrome, Persian-Jewish type","type":"related"}],"termid":"MONDO:0009411","xrefs":{"Monarch":{"xref_id":"0009411"}}}


id: GO:0071486
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a high light intensity stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to high light intensity","termid":"GO:0009644"},{"relation_name":"is_a","term_name":"cellular response to light intensity","termid":"GO:0071484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to high light intensity","termid":"GO:0071486"}


id: PBO:0048100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FTO alpha-ketoglutarate dependent dioxygenase","termid":"PBO:0048100"}


id: GO:0023012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which binding of an MHC complex to T cell receptor causes activation of T cell receptor signaling.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete initiation of T cell receptor signaling by binding of a MHC complex to T cell receptor (obsolete GO:0023012)","synonyms":[{"name":"initiation of T cell receptor signaling by binding of a MHC complex to T cell receptor","type":"exact"},{"name":"initiation of T cell receptor signalling by binding of a MHC complex to T cell receptor","type":"exact"}],"termid":"GO:0023012"}


id: GO:0035854
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a eosinophil cell. A eosinophil is any of the immature or mature forms of a granular leukocyte with a nucleus that usually has two lobes connected by one or more slender threads of chromatin, and cytoplasm containing coarse, round granules that are uniform in size and which can be stained by the dye eosin.","definition_xrefs":["CL:0000771","GOC:BHF","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"eosinophil differentiation","termid":"GO:0030222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eosinophil fate commitment","synonyms":[{"name":"eosinophil cell fate commitment","type":"exact"}],"termid":"GO:0035854"}


id: GO:2000544
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endothelial cell chemotaxis to fibroblast growth factor.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell chemotaxis to fibroblast growth factor","termid":"GO:1904847"},{"relation_name":"is_a","term_name":"regulation of endothelial cell chemotaxis","termid":"GO:2001026"},{"relation_name":"regulates","term_name":"endothelial cell chemotaxis to fibroblast growth factor","termid":"GO:0035768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of endothelial cell chemotaxis to fibroblast growth factor","termid":"GO:2000544"}


id: GO:0000757
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A signal transduction process resulting in the relay, amplification or dampening of a signal generated in response to pheromone exposure in organisms that undergo conjugation without cellular fusion.","definition_xrefs":["GOC:clt"],"gene_count":0,"genotype_count":0,"name":"obsolete signal transduction involved in regulation of conjugation with mutual genetic exchange (obsolete GO:0000757)","synonyms":[{"name":"signal transduction involved in conjugation without cellular fusion","type":"exact"}],"termid":"GO:0000757"}


id: PATO:0001292
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An EM radiation quality that is independent of the EM wavelength range.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"electromagnetic (EM) radiation quality","termid":"PATO:0001291"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"full-spectrum EM radiation quality","termid":"PATO:0001292"}


id: PBO:0117422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zDHHC palmitoyltransferase 17","termid":"PBO:0117422"}


id: PBO:0089834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L33","termid":"PBO:0089834"}


id: GO:0003121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A vasodilation process resulting from secretion of epinephrine into the bloodstream or released by nerve endings.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasodilation","termid":"GO:0042311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epinephrine-mediated vasodilation","secondary_identifiers":["GO:0003123","GO:0003124"],"synonyms":[{"name":"regulation of vasodilation by adrenaline","type":"related"},{"name":"regulation of vasodilation by circulating adrenaline","type":"related"},{"name":"regulation of vasodilation by circulating epinephrine","type":"related"},{"name":"regulation of vasodilation by epinephrine","type":"related"},{"name":"regulation of vasodilation by neuronal adrenaline","type":"related"},{"name":"regulation of vasodilation by neuronal epinephrine","type":"related"}],"termid":"GO:0003121"}


id: MONDO:0024573
data:
  {"annotated_genes":["SJAG_02785","SJAG_01181","SJAG_01665","SJAG_03453","SJAG_00228","SJAG_02923","SJAG_02536","SJAG_03077","SJAG_02342","SJAG_02431","SJAG_00993","SJAG_00547","SJAG_03145","SJAG_03126","SJAG_03703"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87605],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:8000015"},{"annotations":[86792],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014112"},{"annotations":[86794,86793,86795],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014113"},{"annotations":[86800,86799,86798],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014114"},{"annotations":[87478],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012557"},{"annotations":[86971],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009026"},{"annotations":[86949,86950],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008647"},{"annotations":[88237],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012112"},{"annotations":[87999],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012799"},{"annotations":[88246,88247],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013197"},{"annotations":[87125],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010946"},{"annotations":[88242],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012111"},{"annotations":[89074,89076,89075],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008104"},{"annotations":[87558],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033669"},{"annotations":[88441],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012371"},{"annotations":[88232],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013186"},{"annotations":[87295,87296],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054588"}]},"cv_name":"mondo","definition":"Hypertrophic cardiomyopathy caused by mutations in the genes encoding components of the sarcomere, in the absence of predisposing conditions.","definition_xrefs":["NCIT:C84773"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypertrophic cardiomyopathy","termid":"MONDO:0005045"},{"relation_name":"is_a","term_name":"familial cardiomyopathy","termid":"MONDO:0005217"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00228":null,"SJAG_00547":null,"SJAG_00993":null,"SJAG_01181":null,"SJAG_01665":null,"SJAG_02342":null,"SJAG_02431":null,"SJAG_02536":null,"SJAG_02785":null,"SJAG_02923":null,"SJAG_03077":null,"SJAG_03126":null,"SJAG_03145":null,"SJAG_03453":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"familial hypertrophic cardiomyopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:183649","MESH:D024741","SCTID:471885006","OMIMPS:192600","Orphanet:155","UMLS:C0949658","DOID:0080326"],"synonyms":[{"name":"cardiomyopathy, familial hypertrophic","type":"exact"},{"name":"familial hypertrophic cardiomyopathy","type":"exact"},{"name":"familila or idiopathic hypertrophic obstructive cardiomyopathy","type":"exact"},{"name":"hereditary hypertrophic cardiomyopathy","type":"exact"},{"name":"hypertrophic familial cardiomyopathy","type":"exact"}],"termid":"MONDO:0024573","terms_by_termid":{"MONDO:0008104":null,"MONDO:0008647":null,"MONDO:0009026":null,"MONDO:0010946":null,"MONDO:0012111":null,"MONDO:0012112":null,"MONDO:0012371":null,"MONDO:0012557":null,"MONDO:0012799":null,"MONDO:0013186":null,"MONDO:0013197":null,"MONDO:0014112":null,"MONDO:0014113":null,"MONDO:0014114":null,"MONDO:0033669":null,"MONDO:0054588":null,"MONDO:8000015":null},"xrefs":{"Monarch":{"xref_id":"0024573"}}}


id: FYPO:0001509
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"},{"relation_name":"is_a","term_name":"normal protein localization to chromatin","termid":"FYPO:0006163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal protein localization to chromatin during vegetative growth","synonyms":[{"name":"normal protein localisation to chromatin during vegetative growth","type":"exact"},{"name":"normal protein localization to chromatin during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001509"}


id: PR:Q09796
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- kap111 gene.","definition_xrefs":["UniProtKB:Q09796","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"importin beta-like protein kap111 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22G7.02","synonyms":[{"name":"Spom972h-kap111","type":"exact"},{"name":"karyopherin-111 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09796"}


id: MONDO:0000935
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign exophytic neoplasm that arises from the larynx, usually the true vocal cords. It is related to human papillomavirus infection and may arise as a single or multiple lesions. It is characterized by the presence of a connective tissue core covered by stratified squamous epithelium. Hoarseness is the presenting symptom. Transformation to carcinoma is rare.","definition_xrefs":["NCIT:C7742"],"direct_ancestors":[{"relation_name":"is_a","term_name":"squamous papilloma","termid":"MONDO:0001825"},{"relation_name":"is_a","term_name":"benign laryngeal neoplasm","termid":"MONDO:0002354"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"larynx squamous papilloma","secondary_identifiers":["MEDGEN:116099","UMLS:C0240164","DOID:10071"],"synonyms":[{"name":"laryngeal papilloma","type":"exact"},{"name":"larynx papilloma","type":"exact"},{"name":"larynx squamous papilloma","type":"exact"},{"name":"papilloma of larynx","type":"exact"},{"name":"papilloma of the larynx","type":"exact"},{"name":"squamous papilloma of larynx","type":"exact"},{"name":"squamous papilloma of the larynx","type":"exact"}],"termid":"MONDO:0000935","xrefs":{"Monarch":{"xref_id":"0000935"}}}


id: GO:0052176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving glucans within the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by symbiont of host glucan (obsolete GO:0052176)","termid":"GO:0052176"}


id: FYPO:0000725
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of methyl methanesulfonate than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000139","FYPO:0000003","FYPO:0002682"],"is_obsolete":false,"name":"resistance to methyl methanesulfonate","synonyms":[{"name":"resistance to MMS","type":"exact"},{"name":"resistance to methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"resistance to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"resistance to methyl methanesulphonate","type":"exact"},{"name":"resistant to methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0000725"}


id: GO:0097096
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which any suture between facial bones is generated and organized.","definition_xrefs":["GOC:sl","GOC:pr","Wikipedia:Head_and_neck_anatomy#Musculoskeletal_system","Wikipedia:Cranial_sutures"],"direct_ancestors":[{"relation_name":"is_a","term_name":"craniofacial suture morphogenesis","termid":"GO:0097094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"facial suture morphogenesis","termid":"GO:0097096"}


id: MONDO:0800274
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autoimmune disease, susceptibility to, 5","secondary_identifiers":["UMLS:C1969031","MEDGEN:369911"],"synonyms":[{"name":"AIS5","type":"exact"}],"termid":"MONDO:0800274","xrefs":{"Monarch":{"xref_id":"0800274"}}}


id: FYPO:0002052
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the frequency of occurrence of ascospore formation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000257"],"is_obsolete":false,"name":"normal sporulation frequency","synonyms":[{"name":"normal ascospore formation frequency","type":"exact"},{"name":"normal sporulation occurrence","type":"exact"}],"termid":"FYPO:0002052"}


id: PBO:0000301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Cip2","termid":"PBO:0000301"}


id: PBO:0040685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCAS2 pseudogene 3","termid":"PBO:0040685"}


id: PBO:0042631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 6 pseudogene","termid":"PBO:0042631"}


id: FYPO:0000203
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A metabolism phenotype observed in the vegetative growth phase of the life cycle in which ergosterol biosynthesis is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolism phenotype during vegetative growth","termid":"FYPO:0001348"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal ergosterol biosynthetic process","synonyms":[{"name":"abnormal ergosterol biosynthesis","type":"exact"},{"name":"abnormal ergosterol biosynthetic process during mitotic cell cycle","type":"related"},{"name":"abnormal ergosterol biosynthetic process during vegetative growth","type":"exact"}],"termid":"FYPO:0000203"}


id: PBO:0054131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1497","termid":"PBO:0054131"}


id: PBO:0079155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSPAN14 antisense RNA 1","termid":"PBO:0079155"}


id: PR:Q9USN4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1529.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USN4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C1529.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1529.01","synonyms":[{"name":"Spom972h-SPCC1529.01","type":"exact"}],"termid":"PR:Q9USN4"}


id: PBO:0084223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HSP70 family ATP-binding protein; involved in protein folding, vacuolar import of proteins; required for ubiquitin-dependent degradation of short-lived proteins; associated with chaperonin-containing T-complex; 98% identical to paralog Ssa1p with distinct functional specificity in propagation of yeast [URE3] prions and vacuolar-mediated degradation of gluconeogenesis enzymes; binds tRNA, has role in tRNA nuclear import during starvation","termid":"PBO:0084223"}


id: PBO:0089243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated WD repeat protein Nan1/Utp17","termid":"PBO:0089243"}


id: MONDO:0958256
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyoderma gangrenosum-acne-hidradenitis suppurativa-ankylosing spondylitis syndrome","secondary_identifiers":["MEDGEN:1853171","Orphanet:641385","UMLS:C5816788"],"synonyms":[{"name":"PASS syndrome","type":"exact"}],"termid":"MONDO:0958256","xrefs":{"Monarch":{"xref_id":"0958256"}}}


id: GO:0085015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a dormant state is maintained by the symbiont within the host organism.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dormancy process","termid":"GO:0022611"},{"relation_name":"is_a","term_name":"development of symbiont in host","termid":"GO:0044114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dormancy maintenance of symbiont in host","synonyms":[{"name":"NRP","type":"exact"},{"name":"non-replicating persistence","type":"exact"}],"termid":"GO:0085015"}


id: PBO:0064281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology and RUN domain containing M2","termid":"PBO:0064281"}


id: RO:0003302
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship between an entity (e.g. a genotype, genetic variation, chemical, or environmental exposure) and a condition (a phenotype or disease), where the entity has some causal or contributing role that influences the condition.","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_related_to","termid":"RO:0002410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causes_or_contributes_to_condition","termid":"RO:0003302"}


id: PBO:0072684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RUN domain containing 1","termid":"PBO:0072684"}


id: GO:0034898
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: hexadecyltrimethylammonium chloride + NAD(P)H + H+ + O2 = trimethylamine + hexadecanal + NAD(P)+ + H2O.","definition_xrefs":["UM-BBD_reactionID:r1373"],"gene_count":0,"genotype_count":0,"name":"obsolete hexadecyltrimethylammonium chloride monooxygenase activity (obsolete GO:0034898)","termid":"GO:0034898"}


id: PR:Q7Z9H9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A polyphosphoinositide phosphatase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01912","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyphosphoinositide phosphatase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1093.03","secondary_identifiers":["UniProtKB:Q7Z9H9"],"synonyms":[{"name":"Spom972h-FIG4","type":"exact"},{"name":"phosphatidylinositol 3,5-bisphosphate 5-phosphatase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q7Z9H9"}


id: GO:0106334
data:
  {"annotated_genes":["SJAG_04418"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[120821],"is_not":false,"summary":null,"term":"GO:0106334"}]},"cv_name":"molecular_function","definition":"Catalysis of the conversion of a 3'-deoxyribose phosphate in DNA to a 3'-phosphate.","definition_xrefs":["PMID:22084197","PMID:22375014","RHEA:65764","GOC:mah","PMID:21276450"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lyase activity","termid":"GO:0016829"},{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04418":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140097","GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"3'-deoxyribose phosphate lyase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"3'-dRP lyase","type":"related"},{"name":"3'-dRP lyase activity","type":"related"}],"termid":"GO:0106334","terms_by_termid":{"GO:0106334":null}}


id: PR:O42658
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pterin-4-alpha-carbinolamine dehydratase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01871"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pterin-4-alpha-carbinolamine dehydratase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27D7.04","secondary_identifiers":["UniProtKB:O42658"],"synonyms":[{"name":"4-alpha-hydroxy-tetrahydropterin dehydratase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PCD (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PHS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PCBD1","type":"exact"},{"name":"overlapping meiotic transcript 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"pterin carbinolamine dehydratase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42658"}


id: PBO:0089867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxymethylbilane synthase Hem3","termid":"PBO:0089867"}


id: MONDO:0017103
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare genetic developmental defect during embryogenesis (obsolete MONDO:0015960)","termid":"MONDO:0015960"},{"relation_name":"excluded_subClassOf","term_name":"obsolete genetic nervous system disorder (obsolete MONDO:0019117)","termid":"MONDO:0019117"},{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"encephaloclastic disorder","secondary_identifiers":["GARD:20987","Orphanet:269190","UMLS:C5680772","icd11.foundation:1436588898","MEDGEN:1843179"],"termid":"MONDO:0017103","xrefs":{"Monarch":{"xref_id":"0017103"}}}


id: PBO:0031055
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_metaphase/anaphase_transition_delay","termid":"PBO:0031055"}


id: GO:0009306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of proteins from a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transport","termid":"GO:0015031"},{"relation_name":"is_a","term_name":"secretion by cell","termid":"GO:0032940"},{"relation_name":"is_a","term_name":"establishment of protein localization to extracellular region","termid":"GO:0035592"},{"relation_name":"is_a","term_name":"protein localization to extracellular region","termid":"GO:0071692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"protein secretion","secondary_identifiers":["GO:0045166","GO:0045731"],"synonyms":[{"name":"glycoprotein secretion","type":"narrow"},{"name":"protein secretion during cell fate commitment","type":"narrow"},{"name":"protein secretion resulting in cell fate commitment","type":"narrow"}],"termid":"GO:0009306"}


id: GO:0051515
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of monopolar cell growth, polarized growth from one end of a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of unidimensional cell growth","termid":"GO:0051512"},{"relation_name":"is_a","term_name":"regulation of monopolar cell growth","termid":"GO:0051513"},{"relation_name":"positively_regulates","term_name":"monopolar cell growth","termid":"GO:0042814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of monopolar cell growth","synonyms":[{"name":"stimulation of monopolar cell growth","type":"narrow"},{"name":"up regulation of monopolar cell growth","type":"exact"},{"name":"up-regulation of monopolar cell growth","type":"exact"},{"name":"upregulation of monopolar cell growth","type":"exact"}],"termid":"GO:0051515"}


id: GO:2001254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of histone H3-K36 trimethylation.","definition_xrefs":["PMID:17948059"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone H3-K36 trimethylation (obsolete GO:2001254)","termid":"GO:2001254"}


id: GO:0018693
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: A + ethylbenzene + H2O = (S)-1-phenylethanol + AH(2).","definition_xrefs":["EC:1.17.99.2","RHEA:17897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups","termid":"GO:0016725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"ethylbenzene hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-1301","KEGG_REACTION:R05745","UM-BBD_reactionID:r0234"],"synonyms":[{"name":"ethylbenzene dehydrogenase activity","type":"related"},{"name":"ethylbenzene:(acceptor) oxidoreductase activity","type":"related"}],"termid":"GO:0018693"}


id: FYPO:0004167
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is increased relative to normal in a medium containing glycerol as the carbon source.","definition_xrefs":["PomBase:mah","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002057","FYPO:0000139","FYPO:0001985","FYPO:0002058","FYPO:0000003"],"is_obsolete":false,"name":"increased cell population growth on glycerol carbon source","synonyms":[{"name":"increased growth on glycerol carbon source","type":"broad"},{"name":"increased vegetative cell growth on glycerol carbon source","type":"exact"}],"termid":"FYPO:0004167"}


id: GO:0045191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of isotype switching.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA recombination","termid":"GO:0000018"},{"relation_name":"is_a","term_name":"regulation of immunoglobulin production","termid":"GO:0002637"},{"relation_name":"is_a","term_name":"regulation of immunoglobulin mediated immune response","termid":"GO:0002889"},{"relation_name":"is_a","term_name":"regulation of B cell activation","termid":"GO:0050864"},{"relation_name":"regulates","term_name":"isotype switching","termid":"GO:0045190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0010467","GO:0006310","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"regulation of isotype switching","synonyms":[{"name":"regulation of class switch recombination","type":"exact"},{"name":"regulation of class switching","type":"exact"},{"name":"regulation of isotype switch recombination","type":"exact"}],"termid":"GO:0045191"}


id: GO:0022011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuronal axons and dendrites become coated with a segmented lipid-rich sheath (myelin) to enable faster and more energetically efficient conduction of electrical impulses. The sheath is formed by the cell membranes of Schwann cells in the peripheral nervous system. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier.","definition_xrefs":["GOC:dph","GOC:cls","GOC:dgh","GO_REF:0000021","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral nervous system axon ensheathment","termid":"GO:0032292"},{"relation_name":"is_a","term_name":"myelination","termid":"GO:0042552"},{"relation_name":"part_of","term_name":"Schwann cell development","termid":"GO:0014044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myelination in peripheral nervous system","synonyms":[{"name":"peripheral nervous system myelination","type":"exact"}],"termid":"GO:0022011"}


id: PR:000037083
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein complex composed of two subunits of Schizosaccharomyces pombe tropomyosin cdc8.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tropomyosin cdc8","termid":"PR:000028197"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tropomyosin cdc8 homodimer (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC27F1.02c","synonyms":[{"name":"Spom-(cdc8)*2","type":"exact"}],"termid":"PR:000037083"}


id: GO:0015250
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the energy-independent facilitated diffusion of water through a transmembrane aqueous pore or channel.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"water transmembrane transporter activity","termid":"GO:0005372"},{"relation_name":"is_a","term_name":"channel activity","termid":"GO:0015267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"water channel activity","secondary_identifiers":["Reactome:R-HSA-507870","Reactome:R-HSA-445714","MetaCyc:TRANS-RXN-145","Reactome:R-HSA-432065","Reactome:R-HSA-432054","Reactome:R-HSA-432010","Reactome:R-HSA-432067","Reactome:R-HSA-507868"],"synonyms":[{"name":"aquaporin","type":"narrow"}],"termid":"GO:0015250"}


id: PBO:0072122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15","termid":"PBO:0072122"}


id: PBO:0053224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat LGI family member 4","termid":"PBO:0053224"}


id: PR:Q10081
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein ElaA that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0039 protein C11D3.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11D3.02c","secondary_identifiers":["UniProtKB:Q10081"],"synonyms":[{"name":"Spom972h-elaA","type":"exact"}],"termid":"PR:Q10081"}


id: GO:0010190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of cytochrome b6f complex, a complex that transfers electrons from reduced plastoquinone to oxidized plastocyanin and translocates protons from the stroma to the lumen, by the aggregation, arrangement and bonding together of its constituents.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytochrome complex assembly","termid":"GO:0017004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"cytochrome b6f complex assembly","synonyms":[{"name":"cytochrome b6f complex biogenesis","type":"exact"}],"termid":"GO:0010190"}


id: PBO:0070789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 19","termid":"PBO:0070789"}


id: PBO:0060183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucin 3B, cell surface associated","termid":"PBO:0060183"}


id: GO:0050921
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of a motile cell or organism in response to a specific chemical concentration gradient.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to external stimulus","termid":"GO:0032103"},{"relation_name":"is_a","term_name":"positive regulation of locomotion","termid":"GO:0040017"},{"relation_name":"is_a","term_name":"regulation of chemotaxis","termid":"GO:0050920"},{"relation_name":"positively_regulates","term_name":"chemotaxis","termid":"GO:0006935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of chemotaxis","synonyms":[{"name":"activation of chemotaxis","type":"narrow"},{"name":"stimulation of chemotaxis","type":"narrow"},{"name":"up regulation of chemotaxis","type":"exact"},{"name":"up-regulation of chemotaxis","type":"exact"},{"name":"upregulation of chemotaxis","type":"exact"}],"termid":"GO:0050921"}


id: GO:0034272
data:
  {"annotated_genes":["SJAG_01876","SJAG_04552","SJAG_00114","SJAG_03403"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[73302,78517,79032,107541],"is_not":false,"summary":null,"term":"GO:0034272"}]},"cv_name":"cellular_component","definition":"A class III phosphatidylinositol 3-kinase complex that is involved in vacuolar protein sorting (VPS) via endosomes. In budding yeast, this complex consists of Vps30p, Vps34p, Vps38 and Vps15p.","definition_xrefs":["PMID:16421251","PMID:11157979","GOC:ha","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol 3-kinase complex, class III","termid":"GO:0035032"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_01876":null,"SJAG_03403":null,"SJAG_04552":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"phosphatidylinositol 3-kinase complex, class III, type II","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"PtdIns-3-kinase complex II","type":"related"},{"name":"phosphatidylinositol 3-kinase complex II","type":"related"}],"termid":"GO:0034272","terms_by_termid":{"GO:0034272":null}}


id: PBO:0066397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regenerating family member 1 alpha","termid":"PBO:0066397"}


id: GO:0018249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of a water group from a protein amino acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein dehydration","synonyms":[{"name":"protein amino acid dehydration","type":"exact"}],"termid":"GO:0018249"}


id: GO:1903402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of renal phosphate excretion.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:8700837","GOC:pm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of excretion","termid":"GO:0044062"},{"relation_name":"is_a","term_name":"regulation of renal system process","termid":"GO:0098801"},{"relation_name":"regulates","term_name":"renal phosphate excretion","termid":"GO:0044722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of renal phosphate excretion","synonyms":[{"name":"regulation of renal phosphate ion excretion","type":"exact"}],"termid":"GO:1903402"}


id: FYPO:0000907
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrion inheritance is abolished, resulting in the formation of a daughter cell that lacks mitochondria.","definition_xrefs":["GO:0000001","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrion inheritance during vegetative growth","termid":"FYPO:0000906"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished mitochondrion inheritance during vegetative growth","synonyms":[{"name":"abolished mitochondrion inheritance during mitotic cell cycle","type":"related"},{"name":"asymmetric mitochondrial inheritance during vegetative growth","type":"related"},{"name":"mitochondrion inheritance abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0000907"}


id: PATO:0001676
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An efficiency which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"efficient","termid":"PATO:0001678"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased efficiency","synonyms":[{"name":"high efficiency","type":"exact"}],"termid":"PATO:0001676"}


id: PBO:0014743
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"changed_by","termid":"PBO:0014743"}


id: MONDO:0011776
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic Infantile Neurological, Cutaneous, and Articular (CINCA) syndrome is characterized by skin rash, joint involvement, chronic meningitis with granulocytes and, in some cases, sensorineural hearing loss and ocular signs.","definition_xrefs":["Orphanet:1451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder","termid":"MONDO:0002081"},{"relation_name":"is_a","term_name":"cryopyrin-associated periodic syndrome","termid":"MONDO:0016168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"CINCA syndrome","secondary_identifiers":["NANDO:2201066","NANDO:1200468","NORD:1496","GARD:1356","ICD9:759.89","SCTID:239826001","UMLS:C0409818","MEDGEN:98370","NCIT:C116380","DOID:0090029","OMIM:607115"],"synonyms":[{"name":"CINCA","type":"related"},{"name":"CINCA syndrome","type":"exact"},{"name":"CINCA/NOMID","type":"exact"},{"name":"Cryopyrin-associated periodic syndrome 3","type":"related"},{"name":"IOMID","type":"related"},{"name":"IOMID syndrome","type":"exact"},{"name":"NOMID","type":"exact"},{"name":"NOMID syndrome","type":"exact"},{"name":"Neonatal-Onset Multisystem Inflammatory Disease","type":"exact"},{"name":"Prieur Griscelli syndrome","type":"related"},{"name":"Prieur-Griscelli syndrome","type":"exact"},{"name":"chronic infantile neurological cutaneous and articular syndrome","type":"exact"},{"name":"chronic infantile neurological cutaneous articular syndrome","type":"exact"},{"name":"chronic neurologic cutaneous and articular syndrome","type":"exact"},{"name":"cryopyrin-associated periodic syndrome 3","type":"exact"},{"name":"infantile onset multisystem inflammatory disease","type":"related"},{"name":"infantile-onset multisystem inflammatory disease","type":"exact"},{"name":"multisystem inflammatory disease, neonatal-onset","type":"related"},{"name":"neonatal onset multisystem inflammatory disease","type":"related"},{"name":"neonatal-onset multisystem inflammatory disease","type":"exact"}],"termid":"MONDO:0011776","xrefs":{"Monarch":{"xref_id":"0011776"}}}


id: PBO:0089759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine protein transferase Ate1","termid":"PBO:0089759"}


id: PBO:0083622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3-binding protein of the mitochondrial pyruvate dehydrogenase complex; plays a structural role in the complex by binding and positioning dihydrolipoamide dehydrogenase (E3) to the dihydrolipoamide acetyltransferase (E2) core","termid":"PBO:0083622"}


id: PBO:0043070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholinergic receptor muscarinic 4","termid":"PBO:0043070"}


id: MONDO:1012370
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"degenerative neuromuscular disease, non-human animal","termid":"MONDO:1011874"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"degenerative neuromuscular disease, cattle","secondary_identifiers":["OMIA:001351-9913"],"termid":"MONDO:1012370","xrefs":{"Monarch":{"xref_id":"1012370"}}}


id: GO:0005686
data:
  {"annotated_genes":["SJAG_03460","SJAG_02185","SJAG_03210","SJAG_03954","SJAG_05240","SJAG_02279","SJAG_00322","SJAG_01452","SJAG_02843","SJAG_01008","SJAG_01870","SJAG_00577","SJAG_05208","SJAG_02469","SJAG_02304","SJAG_00313","SJAG_03995","SJAG_00539","SJAG_03070","SJAG_00504","SJAG_01819","SJAG_00498","SJAG_00147","SJAG_01301","SJAG_01327","SJAG_04318","SJAG_03245","SJAG_04079","SJAG_03547","SJAG_03469"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72148,72209,73981,74421,74966,75638,75931,77268,77432,77627,77723,78440,78857,79115,79597,81058,82063,97636,104234,105027,108176,109724,110373,111349,111913,114512,114740,116796,117728,118260],"is_not":false,"summary":null,"term":"GO:0005686"}]},"cv_name":"cellular_component","definition":"A ribonucleoprotein complex that contains small nuclear RNA U2, a heptameric ring of Sm proteins, as well as several proteins that are unique to the U2 snRNP, most of which remain associated with the U2 snRNA both while the U2 snRNP is free or assembled into a series of spliceosomal complexes.","definition_xrefs":["ISBN:0879695897","GOC:mah","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal snRNP complex","termid":"GO:0097525"}],"gene_count":30,"genes_by_uniquename":{"SJAG_00147":null,"SJAG_00313":null,"SJAG_00322":null,"SJAG_00498":null,"SJAG_00504":null,"SJAG_00539":null,"SJAG_00577":null,"SJAG_01008":null,"SJAG_01301":null,"SJAG_01327":null,"SJAG_01452":null,"SJAG_01819":null,"SJAG_01870":null,"SJAG_02185":null,"SJAG_02279":null,"SJAG_02304":null,"SJAG_02469":null,"SJAG_02843":null,"SJAG_03070":null,"SJAG_03210":null,"SJAG_03245":null,"SJAG_03460":null,"SJAG_03469":null,"SJAG_03547":null,"SJAG_03954":null,"SJAG_03995":null,"SJAG_04079":null,"SJAG_04318":null,"SJAG_05208":null,"SJAG_05240":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"U2 snRNP","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"17S U2 snRNP","type":"narrow"},{"name":"snRNP U2","type":"exact"}],"termid":"GO:0005686","terms_by_termid":{"GO:0005686":null}}


id: FYPO:0002296
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A colony morphology phenotype in which the colony spreads laterally to a lesser extent, and grows vertically to a greater extent, resulting in a more conical shape, than a wild-type colony.","definition_xrefs":["PomBase:jh","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal colony morphology","termid":"FYPO:0000150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"cone-shaped colony morphology","synonyms":[{"name":"piled-up colony morphology","type":"exact"}],"termid":"FYPO:0002296"}


id: MONDO:0018459
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Isolated glycerol kinase deficiency (GKD) is a very rare X-linked disorder of glycerol metabolism characterized biochemically by elevated plasma and urine glycerol levels, and clinically by variable neurometabolic manifestations, depending on the age of onset, and varying from a life-threatening childhood metabolic crisis to an asymptomatic adult form (infantile GKD, juvenile GKD, and adult GKD ).","definition_xrefs":["Orphanet:408"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn glycerol kinase deficiency","termid":"MONDO:0010613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"isolated glycerol kinase deficiency","secondary_identifiers":["MEDGEN:657821","GARD:2807","UMLS:C0574108","icd11.foundation:542432712"],"synonyms":[{"name":"hyperglycerolemia","type":"exact"},{"name":"isolated inborn glycerol kinase deficiency","type":"exact"},{"name":"nonsyndromic glycerol kinase deficiency","type":"exact"},{"name":"nonsyndromic inborn glycerol kinase deficiency","type":"exact"}],"termid":"MONDO:0018459","xrefs":{"Monarch":{"xref_id":"0018459"}}}


id: MONDO:0011385
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any disease of a degenerative nature that affects the intervertebral disk.","definition_xrefs":["NCIT:C26983"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete bone deterioration disease (obsolete MONDO:0000834)","termid":"MONDO:0000834"},{"relation_name":"is_a","term_name":"vertebral column disorder","termid":"MONDO:0000812"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intervertebral disk degenerative disorder","secondary_identifiers":["MEDGEN:102357","OMIM:603932","ICD9:722.6","DOID:90","MESH:D055959","SCTID:77547008","UMLS:C0158266","EFO:0004994"],"synonyms":[{"name":"IDD","type":"exact"},{"name":"cervical disc degenerative disease","type":"narrow"},{"name":"cervical disk degenerative disease","type":"narrow"},{"name":"degenerative disc disease","type":"exact"},{"name":"degenerative disk disease","type":"exact"},{"name":"degenerative disorder of intervertebral disc","type":"exact"},{"name":"degenerative disorder of intervertebral disk","type":"exact"},{"name":"intervertebral Disc Degeneration","type":"exact"},{"name":"intervertebral Disc degenerative disease","type":"exact"},{"name":"intervertebral Disc degenerative disorder","type":"exact"},{"name":"intervertebral disc degeneration","type":"exact"},{"name":"intervertebral disc disease","type":"exact"},{"name":"intervertebral disk degeneration","type":"exact"},{"name":"intervertebral disk degenerative disorder","type":"exact"},{"name":"intervertebral disk disease","type":"exact"},{"name":"lumbar disc degeneration","type":"narrow"},{"name":"lumbar disk degeneration","type":"narrow"},{"name":"vertebral Disc degenerative disease","type":"exact"},{"name":"vertebral Disc degenerative disorder","type":"exact"},{"name":"vertebral disc disease","type":"exact"},{"name":"vertebral disk disease","type":"exact"}],"termid":"MONDO:0011385","xrefs":{"Monarch":{"xref_id":"0011385"}}}


id: MOD:00786
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes one or more (2)H deuterium atoms for (1)H protium atoms.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(2)H deuterium labeled residue","termid":"MOD:00839"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deuterium substituted residue","synonyms":[{"name":"D(H)Res","type":"exact"}],"termid":"MOD:00786"}


id: PBO:0005207
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Friedreich's ataxia","termid":"PBO:0005207"}


id: PBO:0089876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UNC-50 family protein, implicated in vesicle-mediated transport","termid":"PBO:0089876"}


id: MONDO:0020379
data:
  {"annotated_genes":["SJAG_03815","SJAG_02919","SJAG_04567"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88718,88716,88717],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013411"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset partial cataract","termid":"MONDO:0020377"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02919":null,"SJAG_03815":null,"SJAG_04567":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"early-onset zonular cataract","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:1898","MEDGEN:1842642","Orphanet:98995","UMLS:C5681642","MESH:C535342"],"termid":"MONDO:0020379","terms_by_termid":{"MONDO:0013411":null},"xrefs":{"Monarch":{"xref_id":"0020379"}}}


id: PR:Q9USJ4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nte1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USJ4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysophospholipase NTE1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4B3.04c","synonyms":[{"name":"Spom972h-nte1","type":"exact"},{"name":"intracellular phospholipase B (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"neuropathy target esterase homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USJ4"}


id: PBO:0049527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A.Z variant histone 2","termid":"PBO:0049527"}


id: GO:0047976
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-hamamelose + ATP = D-hamamelose 2'-phosphate + ADP + 2 H+.","definition_xrefs":["EC:2.7.1.102","RHEA:22796"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"hamamelose kinase activity","secondary_identifiers":["MetaCyc:HAMAMELOSE-KINASE-RXN","KEGG_REACTION:R03766"],"synonyms":[{"name":"ATP/hamamelose 2'-phosphotransferase activity","type":"related"},{"name":"ATP:D-hamamelose 2'-phosphotransferase activity","type":"related"},{"name":"hamamelose kinase (phosphorylating)","type":"related"},{"name":"hamamelosekinase (ATP: hamamelose 2'-phosphotransferase)","type":"related"}],"termid":"GO:0047976"}


id: GO:1990881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of DNA damage.","definition_xrefs":["PMID:26150418"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription from RNA polymerase II promoter in response to DNA damage (obsolete GO:1990881)","synonyms":[{"name":"down regulation of transcription from RNA polymerase II promoter in response to DNA damage","type":"exact"},{"name":"down-regulation of transcription from RNA polymerase II promoter in response to DNA damage","type":"exact"},{"name":"downregulation of transcription from RNA polymerase II promoter in response to DNA damage","type":"exact"},{"name":"inhibition of transcription from RNA polymerase II promoter in response to DNA damage","type":"exact"}],"termid":"GO:1990881"}


id: PBO:0004590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA specific adenosine deaminase subunit Tad2","termid":"PBO:0004590"}


id: GO:0033630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of cell adhesion mediated by integrin.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell adhesion mediated by integrin","termid":"GO:0033628"},{"relation_name":"is_a","term_name":"positive regulation of cell adhesion","termid":"GO:0045785"},{"relation_name":"positively_regulates","term_name":"cell adhesion mediated by integrin","termid":"GO:0033627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell adhesion mediated by integrin","synonyms":[{"name":"positive regulation of cell adhesion mediated by integrin complex","type":"exact"}],"termid":"GO:0033630"}


id: PBO:0038714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 9","termid":"PBO:0038714"}


id: PBO:0083608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame unlikely to encode a functional protein; overlaps essential RRN5 gene which encodes a member of the UAF transcription factor involved in transcription of rDNA by RNA polymerase I","termid":"PBO:0083608"}


id: GO:0035446
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-(2-amino-2-deoxy-alpha-D-glucopyranoside)-1D-myo-inositol + L-cysteine + ATP = 1-D-myo-inosityl-2-L-cysteinylamido-2-deoxy-alpha-D-glucopyranoside + AMP + diphosphate + 2 H+. 1-(2-amino-2-deoxy-alpha-D-glucopyranoside)-1D-myo-inositol is also known as glucosaminyl-inositol or GlcN-Ins, and 1-D-myo-inosityl-2-L-cysteinylamido-2-deoxy-alpha-D-glucopyranoside as desacetylmycothiol or Cys-GlcN-Ins.","definition_xrefs":["PMID:12033919","EC:6.3.1.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-ammonia (or amide) ligase activity","termid":"GO:0016880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"cysteine-glucosaminylinositol ligase activity","secondary_identifiers":["MetaCyc:RXN1G-121","RHEA:26176"],"synonyms":[{"name":"L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase","type":"related"},{"name":"MshC ligase","type":"related"},{"name":"desacetylmycothiol synthase","type":"related"}],"termid":"GO:0035446"}


id: GO:0042361
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of menaquinones, any of the quinone-derived compounds synthesized by intestinal bacteria. Structurally, menaquinones consist of a methylated naphthoquinone ring structure and side chains composed of a variable number of unsaturated isoprenoid residues. Menaquinones have vitamin K activity and are known as vitamin K2.","definition_xrefs":["PMID:37938463","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"menaquinone metabolic process","termid":"GO:0009233"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"menaquinone catabolic process","synonyms":[{"name":"menaquinone breakdown","type":"exact"},{"name":"menaquinone catabolism","type":"exact"},{"name":"menaquinone degradation","type":"exact"},{"name":"menatetrenone catabolic process","type":"exact"},{"name":"menatetrenone catabolism","type":"exact"},{"name":"multiprenylmenaquinone catabolic process","type":"exact"},{"name":"multiprenylmenaquinone catabolism","type":"exact"},{"name":"vitamin K2 catabolic process","type":"exact"},{"name":"vitamin K2 catabolism","type":"exact"}],"termid":"GO:0042361"}


id: PBO:0077806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOX high mobility group box family member 4","termid":"PBO:0077806"}


id: GO:0004155
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD(P)+ + 5,6,7,8-tetrahydropteridine = NAD(P)H + H+ + 6,7-dihydropteridine.","definition_xrefs":["EC:1.5.1.34"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"6,7-dihydropteridine reductase activity","secondary_identifiers":["MetaCyc:1.5.1.34-RXN","Reactome:R-HSA-71130"],"synonyms":[{"name":"5,6,7,8-tetrahydropteridine:NAD(P)+ oxidoreductase activity","type":"related"},{"name":"5,6,7,8-tetrahydropteridine:NAD(P)H+ oxidoreductase activity","type":"related"},{"name":"6,7-dihydropteridine:NAD(P)H oxidoreductase activity","type":"related"},{"name":"DHPR activity","type":"related"},{"name":"NAD(P)H(2):6,7-dihydropteridine oxidoreductase activity","type":"related"},{"name":"NAD(P)H2:6,7-dihydropteridine oxidoreductase activity","type":"related"},{"name":"NADH-dihydropteridine reductase activity","type":"related"},{"name":"NADPH-dihydropteridine reductase activity","type":"related"},{"name":"NADPH-specific dihydropteridine reductase activity","type":"related"},{"name":"dihydropteridine (reduced nicotinamide adenine dinucleotide) reductase activity","type":"related"},{"name":"dihydropteridine reductase (NADH) activity","type":"related"},{"name":"dihydropteridine reductase activity","type":"exact"},{"name":"dihydropteridine reduction","type":"related"}],"termid":"GO:0004155"}


id: FYPO:0000284
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A mitosis phenotype observed in the vegetative growth phase of the life cycle in which a cell undergoes unequal mitotic sister chromatid segregation, and as a result the nucleus divides unequally to produce one daughter nucleus that is larger than the other.","definition_xrefs":["PomBase:jh","PomBase:mah","PomBase:vw","PMID:8769419"],"direct_ancestors":[{"relation_name":"is_a","term_name":"large and small daughter nuclei","termid":"FYPO:0006715"},{"relation_name":"output_of","term_name":"complete but unequal mitotic sister chromatid segregation","termid":"FYPO:0001270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000337"},{"rel_name":"output_of","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000641","FYPO:0000631","FYPO:0005447","FYPO:0001320","FYPO:0002403","FYPO:0000337"],"is_obsolete":false,"name":"large and small daughter nuclei, with unequal mitotic sister chromatid segregation","synonyms":[{"name":"complete but unequal mitotic sister chromatid segregation forming large and small daughter nuclei","type":"exact"},{"name":"large and small daughter nuclei resulting from unequal mitotic sister chromatid segregation","type":"related"},{"name":"large and small daughter nuclei, with complete but unequal mitotic sister chromatid segregation","type":"exact"},{"name":"large and small daughter nuclei, with unequal mitotic chromosome segregation","type":"exact"},{"name":"large and small daughter nuclei, with unequal mitotic sister chromatid segregation, during mitotic cell cycle","type":"related"},{"name":"large and small daughter nuclei, with unequal mitotic sister chromatid segregation, during vegetative growth","type":"exact"}],"termid":"FYPO:0000284"}


id: PR:O74380
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC3H7.05c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C3H7.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3H7.05c","synonyms":[{"name":"Spom972h-SPBC3H7.05c","type":"exact"}],"termid":"PR:O74380"}


id: GO:0018503
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: trans-1,2-dihydrodiolphenanthrene + NAD+ = H+ + NADH + 1,2-dihydroxyphenanthrene.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete trans-1,2-dihydrodiolphenanthrene dehydrogenase activity (obsolete GO:0018503)","termid":"GO:0018503"}


id: FYPO:0006379
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the nucleus does not occur when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization","termid":"FYPO:0001375"},{"relation_name":"is_a","term_name":"abolished protein localization to endoplasmic reticulum","termid":"FYPO:0008405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to endoplasmic reticulum during nitrogen starvation","synonyms":[{"name":"abolished protein localisation to endoplasmic reticulum during nitrogen starvation","type":"exact"},{"name":"abolished protein localization to ER during nitrogen starvation","type":"exact"},{"name":"abolished protein localization to endoplasmic reticulum during nitrogen depletion","type":"exact"},{"name":"abolished protein localization to endoplasmic reticulum during nitrogen deprivation","type":"exact"},{"name":"protein localization to endoplasmic reticulum abolished during nitrogen starvation","type":"exact"}],"termid":"FYPO:0006379"}


id: PBO:0059436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane spanning 4-domains A6A","termid":"PBO:0059436"}


id: PBO:0040092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylsulfatase L","termid":"PBO:0040092"}


id: MONDO:0005059
data:
  {"annotated_genes":["SJAG_01013","SJAG_01349","SJAG_05979","SJAG_03453","SJAG_03905","SJAG_01748"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89021,89179,89023,89024,89022,89178],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018874"}]},"cv_name":"mondo","definition":"A malignant (clonal) hematologic disorder, involving hematopoietic stem cells and characterized by the presence of primitive or atypical myeloid or lymphoid cells in the bone marrow and the blood. Leukemias are classified as acute or chronic based on the degree of cellular differentiation and the predominant cell type present. Leukemia is usually associated with anemia, fever, hemorrhagic episodes, and splenomegaly. Common leukemias include acute myeloid leukemia, chronic myelogenous leukemia, acute lymphoblastic or precursor lymphoblastic leukemia, and chronic lymphocytic leukemia. Treatment is vital to patient survival; untreated, the natural course of acute leukemias is normally measured in weeks or months, while that of chronic leukemias is more often measured in months or years.","definition_xrefs":["NCIT:C3161"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"lymphoid neoplasm","termid":"MONDO:0005157"},{"relation_name":"is_a","term_name":"hematopoietic and lymphoid cell neoplasm","termid":"MONDO:0044881"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01013":null,"SJAG_01349":null,"SJAG_01748":null,"SJAG_03453":null,"SJAG_03905":null,"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"leukemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:207","ICD9:208.8","ICDO:9800/3","ICD9:207.8","ICD9:208","MESH:D007938","DOID:1240","ICD9:208.80","EFO:0000565","ICD9:208.90","NANDO:2100002","SCTID:93143009","HP:0001909","ICD9:208.9","ICD9:207.80","MEDGEN:9725","UMLS:C0023418"],"synonyms":[{"name":"blood (leukemia)","type":"exact"},{"name":"leukaemia (disease)","type":"exact"},{"name":"leukaemia NOS","type":"related"},{"name":"leukemia","type":"exact"},{"name":"leukemia (disease)","type":"exact"},{"name":"leukemia, disease","type":"exact"},{"name":"leukemia, malignant","type":"exact"},{"name":"leukemias","type":"exact"},{"name":"leukemias, general","type":"exact"}],"termid":"MONDO:0005059","terms_by_termid":{"MONDO:0018874":null},"xrefs":{"Monarch":{"xref_id":"0005059"}}}


id: GO:0070018
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A receptor complex that consists of two transforming growth factor beta (TGF-beta) type I receptor monomers. TGF-beta type I receptor dimers form in the presence or absence of ligand, and can associate with ligand-bound TGF-beta type II receptor dimers.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta type I receptor homodimeric complex (obsolete GO:0070018)","synonyms":[{"name":"TGF-beta type I receptor complex","type":"exact"},{"name":"TGF-beta type I receptor dimer","type":"exact"},{"name":"TGFBR1 homodimer","type":"exact"},{"name":"transforming growth factor beta type I receptor complex","type":"exact"}],"termid":"GO:0070018"}


id: PBO:0072196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S17 pseudogene 13","termid":"PBO:0072196"}


id: GO:0047992
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: erythro-5-hydroxy-L-lysine + GTP = 5-phosphonooxy-L-lysine + GDP + 2 H+.","definition_xrefs":["RHEA:19049","EC:2.7.1.81"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"amino acid kinase activity","termid":"GO:0019202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"hydroxylysine kinase activity","secondary_identifiers":["Reactome:R-HSA-6788611","KEGG_REACTION:R03378","MetaCyc:HYDROXYLYSINE-KINASE-RXN"],"synonyms":[{"name":"GTP:5-hydroxy-L-lysine O-phosphotransferase activity","type":"related"},{"name":"guanosine triphosphate:5-hydroxy-L-lysine O-phosphotransferase activity","type":"related"},{"name":"hydroxylysine kinase (phosphorylating)","type":"related"}],"termid":"GO:0047992"}


id: PBO:0087910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor IIIA (TFIIIA); essential DNA binding protein required for transcription of 5S rRNA by RNA polymerase III; not involved in transcription of other RNAP III genes; nine conserved zinc fingers; may also bind 5S rRNA","termid":"PBO:0087910"}


id: PBO:0074396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 6","termid":"PBO:0074396"}


id: FYPO:0005030
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which more ribonucleotides than normal are incorporated into the leading strand during mitotic DNA replication.","definition_xrefs":["PMID:25664722","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased ribonucleotide incorporation into DNA","termid":"FYPO:0007680"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000293","FYPO:0001320","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"increased ribonucleotide incorporation on leading strand","synonyms":[{"name":"increased rNMP incorporation on leading strand","type":"related"},{"name":"increased rNTP incorporation on leading strand","type":"related"},{"name":"increased ribonucleotide residue incorporation on leading strand","type":"exact"}],"termid":"FYPO:0005030"}


id: GO:0010703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the rate, frequency or extent of the breakdown of tissues; usually, if not always, accompanied by cell death.","definition_xrefs":["GOC:rl","GOC:tb","GOC:BHF","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histolysis (obsolete GO:0010703)","synonyms":[{"name":"down regulation of histolysis","type":"exact"},{"name":"down-regulation of histolysis","type":"exact"},{"name":"downregulation of histolysis","type":"exact"},{"name":"inhibition of histolysis","type":"narrow"}],"termid":"GO:0010703"}


id: GO:0019584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of galactonate, the anion of galactonic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactonate metabolic process","termid":"GO:0019583"},{"relation_name":"is_a","term_name":"aldonic acid catabolic process","termid":"GO:0046176"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"galactonate catabolic process","synonyms":[{"name":"galactonate breakdown","type":"exact"},{"name":"galactonate catabolism","type":"exact"},{"name":"galactonate degradation","type":"exact"}],"termid":"GO:0019584"}


id: MONDO:0022936
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"de Hauwere Leroy adriaenssens syndrome","secondary_identifiers":["MESH:C535991","UMLS:C2931078","MEDGEN:419709"],"synonyms":[{"name":"iris dysplasia, orbital hypertelorism, and psychomotor retardation","type":"related"}],"termid":"MONDO:0022936","xrefs":{"Monarch":{"xref_id":"0022936"}}}


id: PBO:0064313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid phosphatase 2","termid":"PBO:0064313"}


id: GO:0061735
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A positive regulation of the macromitophagy pathway that is triggered by mitochondrial depolarization and requires the function of a DNM1L-family molecule.","definition_xrefs":["PMID:25349190"],"gene_count":0,"genotype_count":0,"name":"obsolete DNM1L-mediated stimulation of mitophagy in response to mitochondrial depolarization (obsolete GO:0061735)","synonyms":[{"name":"dynamin-like protein-mediated stimulation of mitophagy in response to mitochondrial depolarization","type":"exact"}],"termid":"GO:0061735"}


id: GO:0072252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a metanephric juxtaglomerulus cell over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"juxtaglomerulus cell development","termid":"GO:0072142"},{"relation_name":"part_of","term_name":"metanephric juxtaglomerulus cell differentiation","termid":"GO:0072251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric juxtaglomerulus cell development","termid":"GO:0072252"}


id: PBO:0073997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 4","termid":"PBO:0073997"}


id: GO:0102488
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: dTTP + 2 H2O = dTMP + 2 hydrogenphosphate + 2 H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete dTTP phosphohydrolase activity (obsolete GO:0102488)","termid":"GO:0102488"}


id: PBO:0068952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 196, pseudogene","termid":"PBO:0068952"}


id: MONDO:0015344
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Idiopathic acute transverse myelitis (ATM) is an immune-mediated inflammatory demyelinating disorder of the spinal cord with motor, sensory and autonomic involvement.","definition_xrefs":["Orphanet:139423"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute transverse myelitis","termid":"MONDO:0015342"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"idiopathic acute transverse myelitis","secondary_identifiers":["GARD:19914"],"synonyms":[{"name":"ATM/TM","type":"exact"}],"termid":"MONDO:0015344","xrefs":{"Monarch":{"xref_id":"0015344"}}}


id: _global:during
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"during","secondary_identifiers":["GOREL:0000002"],"termid":"_global:during"}


id: MONDO:0003680
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chondrosarcoma arising from the surface of bone. It is characterized by a lobulated growth pattern, high mitotic activity, myxoid stroma formation, and necrotic changes. It occurs in adults. Clinical presentation includes pain, and sometimes swelling.","definition_xrefs":["NCIT:C7357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone chondrosarcoma","termid":"MONDO:0000515"},{"relation_name":"is_a","term_name":"bone sarcoma","termid":"MONDO:0021054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"periosteal chondrosarcoma","secondary_identifiers":["ICDO:9221/3","MONDO:0003683","UMLS:C0334549","DOID:5859","MEDGEN:90806","DOID:5866"],"synonyms":[{"name":"chondrosarcoma (disease) of periosteum","type":"exact"},{"name":"juxtacortical chondrosarcoma","type":"exact"},{"name":"juxtacortical chondrosarcoma (morphologic abnormality)","type":"exact"},{"name":"periosteal chondrosarcoma","type":"exact"},{"name":"periosteum chondrosarcoma (disease)","type":"exact"}],"termid":"MONDO:0003680","xrefs":{"Monarch":{"xref_id":"0003680"}}}


id: PBO:0059067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MOB4 pseudogene 2","termid":"PBO:0059067"}


id: PBO:0057412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548n","termid":"PBO:0057412"}


id: PR:P00332
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An alcohol dehydrogenase, propanol-preferring that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04737","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alcohol dehydrogenase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC13B11.01","secondary_identifiers":["UniProtKB:P00332"],"synonyms":[{"name":"Spom972h-adhP","type":"exact"}],"termid":"PR:P00332"}


id: MONDO:0019223
data:
  {"annotated_genes":["SJAG_04499","SJAG_00413","SJAG_02769"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87757],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011614"},{"annotations":[88830],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008760"},{"annotations":[88338],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009492"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of energy metabolism","termid":"MONDO:0019243"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00413":null,"SJAG_02769":null,"SJAG_04499":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"disorder of fatty acid and ketone body metabolism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18954","UMLS:C5681281","Orphanet:79174","MEDGEN:1842462"],"synonyms":[{"name":"disorder of fatty acid oxidation and ketone body metabolism","type":"related"},{"name":"inborn disorder of fatty acid oxidation and ketone body metabolism","type":"exact"}],"termid":"MONDO:0019223","terms_by_termid":{"MONDO:0008760":null,"MONDO:0009492":null,"MONDO:0011614":null},"xrefs":{"Monarch":{"xref_id":"0019223"}}}


id: GO:0034217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of ascospore wall chitin, a linear polysaccharide consisting of P-1,4-linked N-acetyl-D-glucosamine residues, found in the walls of ascospores.","definition_xrefs":["GOC:vw","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete ascospore wall chitin biosynthetic process (obsolete GO:0034217)","synonyms":[{"name":"ascospore wall chitin anabolism","type":"exact"},{"name":"ascospore wall chitin biosynthesis","type":"exact"},{"name":"ascospore wall chitin formation","type":"exact"},{"name":"ascospore wall chitin synthesis","type":"exact"}],"termid":"GO:0034217"}


id: PBO:0011064
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved in fungi","termid":"PBO:0011064"}


id: MONDO:0019952
data:
  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id: GO:0006595
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id: FYPO:0003704
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id: GO:0047625
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id: GO:0140461
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id: PBO:0074299
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id: PBO:0047547
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 7 pseudogene 6","termid":"PBO:0047547"}


id: PR:O74748
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- trs8502 gene.","definition_xrefs":["UniProtKB:O74748","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transport protein particle subunit trs85-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1734.07c","synonyms":[{"name":"Spom972h-trs8502","type":"exact"},{"name":"TRAPP subunit trs85-2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74748"}


id: PR:Q9P3E8
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of any of the following genes in Schizosaccharomyces pombe 972h-: SPAC750.02c/SPBPB2B2.16c.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P3E8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C750.02c/PB2B2.16c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB2B2.16c","synonyms":[{"name":"Spom972h-SPBPB2B2.16c","type":"exact"}],"termid":"PR:Q9P3E8"}


id: GO:0005865
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  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Filaments formed of actin and associated proteins; attached to Z discs at either end of sarcomeres in myofibrils.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myofilament","termid":"GO:0036379"},{"relation_name":"part_of","term_name":"actin cytoskeleton","termid":"GO:0015629"},{"relation_name":"part_of","term_name":"sarcomere","termid":"GO:0030017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0015629"],"is_obsolete":false,"name":"striated muscle thin filament","termid":"GO:0005865"}


id: PR:O94630
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id: MOD:01734
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  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a threonine residue with the Proteome Sciences TMT6plex-127 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent O-acylated residue","termid":"MOD:01719"},{"relation_name":"is_a","term_name":"TMT6plex-127 reporter+balance reagent acylated residue","termid":"MOD:01728"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex-127 reporter+balance reagent O3-acylated threonine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01734"}


id: FYPO:0006500
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id: CHEBI:15713
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id: GO:0070516
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  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex formed by the association of the cyclin-dependent protein kinase activating kinase (CAK) holoenzyme complex with ERCC2.","definition_xrefs":["PMID:8692841","PMID:8692842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"CAK-ERCC2 complex","synonyms":[{"name":"cyclin-dependent protein kinase activating kinase holoenzyme-ERCC2 complex","type":"exact"}],"termid":"GO:0070516"}


id: PR:Q9UT07
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A PRELI domain-containing protein 1, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02214","PRO:DNx","PANTHER:PTHR11158:SF16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein ups1 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP8A3.10","secondary_identifiers":["UniProtKB:Q9UT07"],"synonyms":[{"name":"Spom972h-PRELID1","type":"exact"}],"termid":"PR:Q9UT07"}


id: GO:2000075
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id: GO:0009087
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-methionine (2-amino-4-(methylthio)butanoic acid), a sulfur-containing, essential amino acid found in peptide linkage in proteins.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur amino acid catabolic process","termid":"GO:0000098"},{"relation_name":"is_a","term_name":"methionine metabolic process","termid":"GO:0006555"},{"relation_name":"is_a","term_name":"aspartate family amino acid catabolic process","termid":"GO:0009068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"L-methionine catabolic process","secondary_identifiers":["UM-BBD_pathwayID:met"],"synonyms":[{"name":"methionine breakdown","type":"exact"},{"name":"methionine catabolism","type":"exact"},{"name":"methionine degradation","type":"exact"}],"termid":"GO:0009087"}


id: PBO:0004315
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  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.5.1.48","termid":"PBO:0004315"}


id: PATO:0002231
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A split shape quality inhering in a bearer by virtue of the bearer's having or being divided into many lobes or similar segments.","direct_ancestors":[{"relation_name":"is_a","term_name":"split","termid":"PATO:0001786"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multifid","termid":"PATO:0002231"}


id: PBO:0040884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMP7 antisense RNA 1","termid":"PBO:0040884"}


id: MONDO:0001661
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An early stage of diabetic retinopathy that is characterized by retinal hemorrhage and exudate, but without proliferation of the blood vessels.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diabetic retinopathy","termid":"MONDO:0005266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005066"],"is_obsolete":false,"name":"background diabetic retinopathy","secondary_identifiers":["NCIT:C35668","UMLS:C0004606","ICD9:362.01","ICD9:362.03","SCTID:390834004","MEDGEN:2531","DOID:13208"],"synonyms":[{"name":"non proliferative diabetic retinopathy","type":"exact"},{"name":"non-proliferative diabetic retinopathy","type":"exact"}],"termid":"MONDO:0001661","xrefs":{"Monarch":{"xref_id":"0001661"}}}


id: PBO:0074367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"single-pass membrane protein with coiled-coil domains 4 pseudogene 1","termid":"PBO:0074367"}


id: PBO:0080193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VENT homeobox pseudogene 1","termid":"PBO:0080193"}


id: PBO:0060513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-ethylmaleimide-sensitive factor attachment protein, gamma pseudogene 1","termid":"PBO:0060513"}


id: GO:0047346
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: aldose 1-phosphate + ADP = phosphate + ADP-aldose.","definition_xrefs":["MetaCyc:2.7.7.36-RXN","EC:2.7.7.36"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016779"],"is_obsolete":false,"name":"aldose-1-phosphate adenylyltransferase activity","synonyms":[{"name":"ADP sugar phosphorylase activity","type":"related"},{"name":"ADP-aldose phosphorylase activity","type":"related"},{"name":"ADP-sugar phosphorylase activity","type":"broad"},{"name":"ADP:aldose-1-phosphate adenylyltransferase activity","type":"exact"},{"name":"ADP:alpha-D-aldose-1-phosphate adenylyltransferase activity","type":"related"},{"name":"ADPaldose phosphorylase activity","type":"related"},{"name":"adenosine diphosphate glucose:orthophosphate adenylyltransferase activity","type":"related"},{"name":"adenosine diphosphosugar phosphorylase activity","type":"related"},{"name":"sugar-1-phosphate adenylyltransferase activity","type":"broad"}],"termid":"GO:0047346"}


id: FYPO:0004720
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a normal proportion of cells in the population remains viable after exposure to heat shock. Heat shock is a form of heat stress in which cells are briefly exposed to a very high temperature.","definition_xrefs":["PomBase:mah","PMID:11711540"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"},{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000003","FYPO:0000257"],"is_obsolete":false,"name":"normal viability following cellular response to heat shock","synonyms":[{"name":"normal cell population viability following heat shock","type":"exact"}],"termid":"FYPO:0004720"}


id: GO:0015554
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of tartrate from one side of a membrane to the other. Tartrate is the anion of 2,3-dihydroxybutanedioic acid, one of the aldaric acids. The L(+) enantiomer occurs widely in plants, especially in grape juice, and in fungi and bacteria.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salt transmembrane transporter activity","termid":"GO:1901702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"tartrate transmembrane transporter activity","termid":"GO:0015554"}


id: PBO:0046887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 9 member C","termid":"PBO:0046887"}


id: SO:0001725
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 4th residue (a lysine), from the start of the H3 histone protein is di-methylated.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"H3K4_methylation_site","termid":"SO:0001734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K4_dimethylation_site","synonyms":[{"name":"H3K4 di-methylation site","type":"exact"},{"name":"H3K4Me2","type":"related"}],"termid":"SO:0001725"}


id: GO:0046326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the import of the hexose monosaccharide glucose into a cell or organelle.","definition_xrefs":["GOC:ai","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of D-glucose transmembrane transport","termid":"GO:0010828"},{"relation_name":"is_a","term_name":"regulation of D-glucose import","termid":"GO:0046324"},{"relation_name":"positively_regulates","term_name":"D-glucose import","termid":"GO:0046323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of D-glucose import","synonyms":[{"name":"activation of glucose import","type":"narrow"},{"name":"positive regulation of glucose import","type":"exact"},{"name":"positive regulation of glucose uptake","type":"exact"},{"name":"stimulation of glucose import","type":"narrow"},{"name":"up regulation of glucose import","type":"exact"},{"name":"up-regulation of glucose import","type":"exact"},{"name":"upregulation of glucose import","type":"exact"}],"termid":"GO:0046326"}


id: PBO:0076366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trace amine associated receptor 3, pseudogene","termid":"PBO:0076366"}


id: PBO:0040313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase F1 subunit alpha pseudogene 7","termid":"PBO:0040313"}


id: PR:Q9C100
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein O-mannosyl-transferase 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01379","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-phosphate-mannose--protein mannosyltransferase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1E7.09","secondary_identifiers":["UniProtKB:Q9C100"],"synonyms":[{"name":"Spom972h-POMT2","type":"exact"}],"termid":"PR:Q9C100"}


id: FYPO:0002849
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is curved when the cell population has been in stationary phase and is then placed in conditions that allow recovery. In a curved cell, the long axis follows a smooth bend rather than a straight line.","definition_xrefs":["PomBase:jh","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curved vegetative cell","termid":"FYPO:0000016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000005","FYPO:0000002"],"is_obsolete":false,"name":"curved cell during recovery from stationary phase","synonyms":[{"name":"comma-shaped cell during recovery from stationary phase","type":"exact"},{"name":"curved cell during recovery from stationary phase during mitotic cell cycle","type":"related"},{"name":"curved cell during vegetative growth following stationary phase","type":"exact"}],"termid":"FYPO:0002849"}


id: GO:0045093
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to alpha subunit of interleukin-18. IL-18a is a component of IL-18 that is essential for IL-18 binding on the surface of T-helper 1 cells.","definition_xrefs":["PMID:10653850"],"gene_count":0,"genotype_count":0,"name":"obsolete interleukin-18 alpha subunit binding (obsolete GO:0045093)","synonyms":[{"name":"IL-18Ra binding","type":"exact"}],"termid":"GO:0045093"}


id: MONDO:0010039
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Heart defect B round face B congenital developmental delay is very rare syndrome described in three sibs of one Japanese family and characterized by congenital heart disease, round face with depressed nasal bridge, small mouth, short stature, and relatively dark skin and typical dermatoglyphic anomalies, and intellectual deficit.","definition_xrefs":["Orphanet:1355"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital heart defect-round face-developmental delay syndrome","secondary_identifiers":["UMLS:C0796162","GARD:4905","SCTID:715987000","MESH:C536680","OMIM:270460","MEDGEN:167108"],"synonyms":[{"name":"Sonoda syndrome","type":"exact"},{"name":"round face with depressed nasal Bridge and small mouth, congenital heart defect, and retarded development","type":"related"}],"termid":"MONDO:0010039","xrefs":{"Monarch":{"xref_id":"0010039"}}}


id: GO:0015040
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. An electron transfer flavoprotein that functions as a housekeeping protein that links acyl-CoA dehydrogenase reactions with the respiratory chain, such as in the fatty acid degradation pathway.","definition_xrefs":["PMID:8599534"],"gene_count":0,"genotype_count":0,"name":"obsolete electron transfer flavoprotein, group I (obsolete GO:0015040)","synonyms":[{"name":"electron transfer flavoprotein, group I","type":"exact"}],"termid":"GO:0015040"}


id: GO:0010258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form NADH:plastoquinone dehydrogenase complex, which is involved in the non-photochemical reduction of plastoquinones, as well as the cyclic electron transport around photosystem I.","definition_xrefs":["PMID:15608332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NADH dehydrogenase complex assembly","termid":"GO:0010257"},{"relation_name":"is_a","term_name":"NAD(P)H dehydrogenase complex assembly","termid":"GO:0010275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"NADH dehydrogenase complex (plastoquinone) assembly","termid":"GO:0010258"}


id: FYPO:0004372
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a mitotic cell cycle arrest that normally occurs in response to the mitotic G2 DNA damage checkpoint is decreased. The mitotic G2 DNA damage checkpoint negatively regulates progression through the G2/M transition of the mitotic cell cycle in response to DNA damage. In a mutant, the checkpoint may fail to arrest or delay cell cycle progression under appropriate conditions, or the incidence or duration of arrest or delay may differ from wild type under any specified set of conditions.","definition_xrefs":["GO:0072435","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic G2 DNA damage checkpoint","termid":"FYPO:0004373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000298","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000631"],"is_obsolete":false,"name":"decreased response to mitotic G2 DNA damage checkpoint signaling","synonyms":[{"name":"decreased G2 DNA damage checkpoint during mitotic cell cycle","type":"related"},{"name":"decreased mitotic G2 DNA damage checkpoint during vegetative growth","type":"exact"},{"name":"reduced response to mitotic G2 DNA damage checkpoint signaling","type":"exact"}],"termid":"FYPO:0004372"}


id: GO:0043812
data:
  {"annotated_genes":["SJAG_00880","SJAG_02706"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75592,79920],"is_not":false,"summary":null,"term":"GO:0043812"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 1,2-diacyl-sn-glycero-3-phospho-(1D-myo-inositol 4-phosphate) + H2O = a 1,2-diacyl-sn-glycero-3-phospho-(1D-myo-inositol) + phosphate.","definition_xrefs":["PMID:10224048","RHEA:55652"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol phosphate 4-phosphatase activity","termid":"GO:0034596"},{"relation_name":"is_a","term_name":"phosphatidylinositol monophosphate phosphatase activity","termid":"GO:0052744"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00880":null,"SJAG_02706":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"phosphatidylinositol-4-phosphate phosphatase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:RXN-10961"],"synonyms":[{"name":"phosphatidylinositol 4-phosphate phosphatase activity","type":"exact"}],"termid":"GO:0043812","terms_by_termid":{"GO:0043812":null}}


id: PATO:0000102
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000102 macronutrient sensitivity (obsolete PATO:0000102)","termid":"PATO:0000102"}


id: PBO:0039217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase family 1 member C8","termid":"PBO:0039217"}


id: MONDO:0004030
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from the transitional epithelium of the ureter. It is associated with tobacco use and usually presents with gross or microscopic hematuria.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ureter carcinoma","termid":"MONDO:0006481"},{"relation_name":"is_a","term_name":"renal pelvis/ureter urothelial carcinoma","termid":"MONDO:0020654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ureter transitional cell carcinoma","secondary_identifiers":["UMLS:C0577692","MEDGEN:108291","NCIT:C4830","SCTID:300988009","DOID:6888"],"synonyms":[{"name":"transitional cell carcinoma of the ureter","type":"exact"},{"name":"transitional cell carcinoma of ureter","type":"exact"},{"name":"ureter transitional cell carcinoma","type":"exact"},{"name":"ureter urothelial cancer","type":"exact"},{"name":"ureter urothelial carcinoma","type":"exact"},{"name":"ureteral transitional cell carcinoma","type":"exact"},{"name":"ureteral urothelial cell carcinoma","type":"exact"},{"name":"urothelial cell carcinoma of the ureter","type":"exact"},{"name":"urothelial cell carcinoma of ureter","type":"exact"}],"termid":"MONDO:0004030","xrefs":{"Monarch":{"xref_id":"0004030"}}}


id: PBO:0061614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear distribution C pseudogene 2","termid":"PBO:0061614"}


id: PBO:0034441
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_telomere-telomerase_complex_assembly","termid":"PBO:0034441"}


id: PBO:0015268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha glucan synthase Ags1","termid":"PBO:0015268"}


id: PBO:0089332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HSP chaperone complex subunit Cns1","termid":"PBO:0089332"}


id: PBO:0089711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF2456 family conserved fungal protein","termid":"PBO:0089711"}


id: FYPO:0006096
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to actin cables is abnormal. Actin cables are parallel actin filament bundles nucleated by formin, and are the most common form of actin filament bundles found in yeasts.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to actin cytoskeleton during vegetative growth","termid":"FYPO:0007578"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal protein localization to actin cable","synonyms":[{"name":"abnormal protein localisation to actin cable","type":"exact"},{"name":"abnormal protein localization to actin cable during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to actin cable during vegetative growth","type":"exact"},{"name":"abnormal protein localization to formin-nucleated actin cable","type":"exact"}],"termid":"FYPO:0006096"}


id: MONDO:1010556
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spina bifida that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spina bifida, non-human animal","termid":"MONDO:1010047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spina bifida, dog","secondary_identifiers":["OMIA:000933-9615"],"termid":"MONDO:1010556","xrefs":{"Monarch":{"xref_id":"1010556"}}}


id: PBO:0088334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein with a role in clearing protein aggregates","termid":"PBO:0088334"}


id: MONDO:0017425
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Preaxial polydactyly of fingers is a limb malformation syndrome characterized by the attachment of a superfluous digit on the first digit. Four types have been defined: Type I (PPD1 or biphalangeal thumb polydactyly) which shows duplication of one or more skeletal components of a biphalangeal thumb; type II (PPD2 or polydactyly of a triphalangeal thumb) which involves the presence of a usually opposable triphalangeal thumb with or without additional duplication of thumb; type III (PPD3 or polydactyly of an index finger) where the thumb is replaced by one or two triphalangeal digits with dermatoglyphic pattern specific for the index finger; and type IV (PPD4 or polysyndactyly) which shows variably mild degrees of thumb duplication and variable syndactyly between 3rd and 4th fingers. Among the four types, PPD1 is the most frequent form. Preaxial polydactyly of fingers is caused by disruptions to the developmental patterning of the limb along the anterior-posterior axis that lead to changes in digit number and identity.","definition_xrefs":["Orphanet:294939"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic polydactyly","termid":"MONDO:0011348"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"preaxial polydactyly of fingers","secondary_identifiers":["MEDGEN:87498","icd11.foundation:1066753144","UMLS:C0345354","GARD:12767","OMIMPS:174400"],"synonyms":[{"name":"preaxial polydactyly of hand","type":"exact"}],"termid":"MONDO:0017425","xrefs":{"Monarch":{"xref_id":"0017425"}}}


id: GO:0008081
data:
  {"annotated_genes":["SJAG_00956","SJAG_02481","SJAG_01860","SJAG_01428","SJAG_02161","SJAG_00321","SJAG_01219","SJAG_04418","SJAG_02298","SJAG_00622","SJAG_03994","SJAG_01519","SJAG_03665"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[81650],"is_not":false,"summary":null,"term":"GO:0008081"},{"annotations":[92457,102875],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004113"},{"annotations":[80790],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004115"},{"annotations":[80792],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047555"},{"annotations":[81019],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017005"},{"annotations":[73428],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047389"},{"annotations":[95342],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062050"},{"annotations":[110666],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052714"},{"annotations":[99585],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034479"},{"annotations":[74486],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004435"},{"annotations":[68900,111802],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004528"},{"annotations":[76091],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004630"},{"annotations":[64054],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004767"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of a phosphodiester to give a phosphomonoester and a free hydroxyl group.","definition_xrefs":["EC:3.1.4.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric ester hydrolase activity","termid":"GO:0042578"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00321":null,"SJAG_00622":null,"SJAG_00956":null,"SJAG_01219":null,"SJAG_01428":null,"SJAG_01519":null,"SJAG_01860":null,"SJAG_02161":null,"SJAG_02298":null,"SJAG_02481":null,"SJAG_03665":null,"SJAG_03994":null,"SJAG_04418":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phosphoric diester hydrolase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5693578","GO:0004434","GO:0016792"],"synonyms":[{"name":"phosphodiesterase","type":"narrow"}],"termid":"GO:0008081","terms_by_termid":{"GO:0004113":null,"GO:0004115":null,"GO:0004435":null,"GO:0004528":null,"GO:0004630":null,"GO:0004767":null,"GO:0008081":null,"GO:0017005":null,"GO:0034479":null,"GO:0047389":null,"GO:0047555":null,"GO:0052714":null,"GO:0062050":null}}


id: MONDO:0003807
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete follicular thyroid adenoma (obsolete MONDO:0003807)","termid":"MONDO:0003807","xrefs":{"Monarch":{"xref_id":"0003807"}}}


id: GO:0006311
data:
  {"annotated_genes":["SJAG_02267","SJAG_02460"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91108,102367],"is_not":false,"summary":null,"term":"GO:0006311"}]},"cv_name":"biological_process","definition":"The cell cycle process in which genetic information is transferred from one helix to another. It often occurs in association with general genetic recombination events, and is believed to be a straightforward consequence of the mechanisms of general recombination and DNA repair. For example, meiosis might yield three copies of the maternal version of an allele and only one copy of the paternal allele, indicating that one of the two copies of the paternal allele has been changed to a copy of the maternal allele.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene conversion","termid":"GO:0035822"},{"relation_name":"is_a","term_name":"meiosis I cell cycle process","termid":"GO:0061982"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02267":null,"SJAG_02460":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0006259","GO:0006310"],"is_obsolete":false,"name":"meiotic gene conversion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"gene conversion without reciprocal crossover","type":"exact"}],"termid":"GO:0006311","terms_by_termid":{"GO:0006311":null}}


id: MONDO:0021208
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"alopecia","termid":"MONDO:0004907"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endocrine alopecia","secondary_identifiers":["ICD9:704.09","MEDGEN:507423","SCTID:54539003","UMLS:C0002176"],"termid":"MONDO:0021208","xrefs":{"Monarch":{"xref_id":"0021208"}}}


id: FYPO:0006080
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to nuclear exosome foci is normal (i.e. indistinguishable from wild type). Nuclear exosome foci, also called Mmi1 foci, are small structures that form within the nucleus, and contain proteins involved in degrading meiosis-specific RNAs during the mitotic cell cycle, such as Mmi1, Iss10, and Red1.","definition_xrefs":["PMID:21317872","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001312","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to nuclear exosome focus during vegetative growth","synonyms":[{"name":"normal protein localisation to nuclear exosome focus during vegetative growth","type":"exact"},{"name":"normal protein localization to Mmi1 focus during vegetative growth","type":"exact"},{"name":"normal protein localization to Mmi1 nuclear focus during vegetative growth","type":"exact"},{"name":"normal protein localization to nuclear exosome foci during vegetative growth","type":"exact"},{"name":"normal protein localization to nuclear exosome focus during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006080"}


id: GO:1901928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cadinene.","definition_xrefs":["GOC:TermGenie","PMID:22867794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpene biosynthetic process","termid":"GO:0051762"},{"relation_name":"is_a","term_name":"cadinene metabolic process","termid":"GO:1901926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"cadinene biosynthetic process","synonyms":[{"name":"cadinene anabolism","type":"exact"},{"name":"cadinene biosynthesis","type":"exact"},{"name":"cadinene formation","type":"exact"},{"name":"cadinene synthesis","type":"exact"}],"termid":"GO:1901928"}


id: FYPO:0002082
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of ubiquitination of one or more specific proteins, or of specific protein sites, is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein ubiquitination during vegetative growth","termid":"FYPO:0000905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0002494"],"is_obsolete":false,"name":"increased protein ubiquitination during vegetative growth","synonyms":[{"name":"increased protein ubiquitination during mitotic cell cycle","type":"related"},{"name":"increased protein ubiquitinylation during vegetative growth","type":"exact"},{"name":"increased protein ubiquitylation during vegetative growth","type":"exact"}],"termid":"FYPO:0002082"}


id: GO:0120295
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-glutaminyl-[histone] + serotonin = 5-serotonyl-L-glutamyl-[histone] + NH4(+).","definition_xrefs":["PMID:30867594","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide serotonyltransferase activity","termid":"GO:0120294"},{"relation_name":"is_a","term_name":"histone modifying activity","termid":"GO:0140993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0003824","GO:0016740","GO:0140096"],"is_obsolete":false,"name":"histone serotonyltransferase activity","termid":"GO:0120295"}


id: GO:0120049
data:
  {"annotated_genes":["SJAG_01958"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97009],"is_not":false,"summary":null,"term":"GO:0120049"}]},"cv_name":"biological_process","definition":"The posttranscriptional N6-methylation of an adenine residue in an snRNA molecule.","definition_xrefs":["PMID:28525753"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA modification","termid":"GO:0040031"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01958":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016073"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0016073"],"is_obsolete":false,"name":"snRNA (adenine-N6)-methylation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0120049","terms_by_termid":{"GO:0120049":null}}


id: GO:0102104
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (4-coumaroyl)acetyl-CoA + feruloyl-CoA + H2O = demethoxycurcumin + 2 coenzyme A + carbon dioxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete demethoxycurcumin synthase (obsolete GO:0102104)","termid":"GO:0102104"}


id: MONDO:0001946
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Abnormally high level of estrogen.","definition_xrefs":["NCIT:P378"],"gene_count":0,"genotype_count":0,"name":"obsolete hyperestrogenism (obsolete MONDO:0001946)","secondary_identifiers":["NANDO:2200379","ICD9:256.0","SCTID:37295009","DOID:14336","ICD10CM:E28.0","ICD10WHO:E28.0"],"synonyms":[{"name":"estrogen Excess","type":"related"},{"name":"hyperestrogenism","type":"exact"}],"termid":"MONDO:0001946","xrefs":{"Monarch":{"xref_id":"0001946"}}}


id: GO:0008429
data:
  {"annotated_genes":["SJAG_02414"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72260],"is_not":false,"summary":null,"term":"GO:0008429"}]},"cv_name":"molecular_function","definition":"Binding to a phosphatidylethanolamine, a class of glycerophospholipids in which a phosphatidyl group is esterified to the hydroxyl group of ethanolamine.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid binding","termid":"GO:0005543"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02414":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0008289"],"is_obsolete":false,"name":"phosphatidylethanolamine binding","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0008429","terms_by_termid":{"GO:0008429":null}}


id: PBO:0039008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALF transcription elongation factor 3","termid":"PBO:0039008"}


id: PATO:0001152
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's having susceptibilty toward an external stimulus.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"susceptibility toward","termid":"PATO:0001043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"susceptible toward","synonyms":[{"name":"susceptible","type":"exact"}],"termid":"PATO:0001152"}


id: PBO:0050283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histocompatibility minor serpin domain containing","termid":"PBO:0050283"}


id: PBO:0043388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLYBL antisense RNA 2","termid":"PBO:0043388"}


id: PBO:0046195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin A","termid":"PBO:0046195"}


id: PR:Q9HFF2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC683.02c gene.","definition_xrefs":["UniProtKB:Q9HFF2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C683.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC683.02c","synonyms":[{"name":"Spom972h-SPAC683.02c","type":"exact"}],"termid":"PR:Q9HFF2"}


id: PBO:0071090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 92","termid":"PBO:0071090"}


id: PBO:0005458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD-dependent glutamate dehydrogenase Gdh2 (predicted)","termid":"PBO:0005458"}


id: MONDO:0020711
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A thyroid hormone resistance syndrome characterized by resistance in peripheral tissues but not in the pituitary.","definition_xrefs":["PMID:8475937"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid hormone resistance syndrome","termid":"MONDO:0001328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"selective peripheral resistance to thyroid hormone","synonyms":[{"name":"PerRTH","type":"exact"}],"termid":"MONDO:0020711","xrefs":{"Monarch":{"xref_id":"0020711"}}}


id: GO:0019682
data:
  {"annotated_genes":["SJAG_03174","SJAG_03934","SJAG_04192","SJAG_00501","SJAG_00070","SJAG_04263"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73774],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046166"},{"annotations":[106176,110267,75515,76273,74865],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009052"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving glyceraldehyde-3-phosphate, an important intermediate in glycolysis.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde metabolic process","termid":"GO:0006081"},{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00070":null,"SJAG_00501":null,"SJAG_03174":null,"SJAG_03934":null,"SJAG_04192":null,"SJAG_04263":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glyceraldehyde-3-phosphate metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"glyceraldehyde 3-phosphate metabolic process","type":"exact"},{"name":"glyceraldehyde 3-phosphate metabolism","type":"exact"},{"name":"glyceraldehyde-3-phosphate metabolism","type":"exact"}],"termid":"GO:0019682","terms_by_termid":{"GO:0009052":null,"GO:0046166":null}}


id: GO:0035153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Allocation of epithelial cells within each migrating branch in an open tracheal system to distinct tracheal cell fates. During the migration phase each branch forms a well-defined number of cell types (including fusion cells, terminal cells and branch cells) at precise positions.","definition_xrefs":["PMID:11063940","PMID:10684581","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate specification","termid":"GO:0001708"},{"relation_name":"part_of","term_name":"open tracheal system development","termid":"GO:0007424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell type specification, open tracheal system","synonyms":[{"name":"tracheal cell type specification","type":"broad"},{"name":"tracheal epithelial cell type specification","type":"exact"}],"termid":"GO:0035153"}


id: PBO:0068738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5B small nuclear 1","termid":"PBO:0068738"}


id: GO:0051298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The replication of a centrosome, a structure comprised of a pair of centrioles and peri-centriolar material from which a microtubule spindle apparatus is organized.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"part_of","term_name":"centrosome cycle","termid":"GO:0007098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0000226","GO:0007049"],"is_obsolete":false,"name":"centrosome duplication","synonyms":[{"name":"centrosome replication","type":"exact"}],"termid":"GO:0051298"}


id: PBO:0068417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"renalase, FAD dependent amine oxidase","termid":"PBO:0068417"}


id: PBO:0040445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase phospholipid transporting 9A (putative)","termid":"PBO:0040445"}


id: PBO:0025540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein, CENP-Q homolog Fta7","termid":"PBO:0025540"}


id: GO:0000242
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A network of small fibers that surrounds the centrioles in cells; contains the microtubule nucleating activity of the centrosome.","definition_xrefs":["ISBN:0815316194","GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"centrosome","termid":"GO:0005813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005575","GO:0015630"],"is_obsolete":false,"name":"pericentriolar material","termid":"GO:0000242"}


id: GO:1905648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of shell calcification.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:14648763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biomineral tissue development","termid":"GO:0070167"},{"relation_name":"regulates","term_name":"shell calcification","termid":"GO:0031215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of shell calcification","termid":"GO:1905648"}


id: GO:0060591
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a mesenchymal cell, acquires specialized structural and/or functional features of a chondroblast. Differentiation includes the processes involved in commitment of a cell to a chondroblast fate. A chondroblast is a precursor cell to chondrocytes.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"cartilage development","termid":"GO:0051216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chondroblast differentiation","synonyms":[{"name":"chondrocyte progenitor cell differentiation","type":"related"}],"termid":"GO:0060591"}


id: GO:0007034
data:
  {"annotated_genes":["SJAG_00208","SJAG_01913","SJAG_02234","SJAG_03511","SJAG_01527","SJAG_04489","SJAG_03783","SJAG_01645","SJAG_01876","SJAG_01981","SJAG_01445","SJAG_16459","SJAG_04349","SJAG_01586","SJAG_01324","SJAG_02117","SJAG_03976","SJAG_04966","SJAG_02811","SJAG_07012","SJAG_03970","SJAG_02912","SJAG_03848","SJAG_00204","SJAG_01080","SJAG_00108","SJAG_00301","SJAG_04912","SJAG_03005","SJAG_04936","SJAG_03756","SJAG_01598","SJAG_01088","SJAG_04047","SJAG_04822","SJAG_02587","SJAG_00416","SJAG_01488","SJAG_02315","SJAG_02240","SJAG_02453","SJAG_04024","SJAG_03347","SJAG_00821","SJAG_05207","SJAG_04023","SJAG_04600","SJAG_03403","SJAG_01367","SJAG_00299","SJAG_05245","SJAG_02349","SJAG_03892","SJAG_02049","SJAG_04643","SJAG_01229","SJAG_01809","SJAG_00380","SJAG_01242","SJAG_01360","SJAG_03250","SJAG_04552","SJAG_05210","SJAG_03442","SJAG_04070","SJAG_04931","SJAG_05303","SJAG_00181","SJAG_03072","SJAG_00900","SJAG_02584","SJAG_03385","SJAG_03726","SJAG_03962","SJAG_03860","SJAG_03963","SJAG_03137","SJAG_04902","SJAG_00916","SJAG_00777","SJAG_02371","SJAG_01281"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72634,73678,79198,90920,97648,116377],"is_not":false,"summary":null,"term":"GO:0007034"},{"annotations":[70912,93455,116310,107585,89937,93316,65861,64926,64512,89824,69296,115166],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120113"},{"annotations":[79910,77912,75265,92389,101735,79459,98957,110640,79485,119415,98692,77858,79370,112113,81380,103274,113354,101329,71697,95998,97950],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006896"},{"annotations":[120312,75733,118761,79034,102939,110834,91993,102076,107542,112746,103801,109463,102134,111655,78518,77478],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045324"},{"annotations":[72446,104968,80989,77727,108964,112056,77049,105945,100682,100500],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032511"},{"annotations":[92816],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044395"},{"annotations":[79033,82126,72974,79909,98366,78932,77476,74485,75731,79457],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006623"},{"annotations":[108397,79945,73865,89771,80216,99773,79483,102712,89940,72664,73901,72834,93319,111222,116569,93458,97781,75263,75242],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043328"}]},"cv_name":"biological_process","definition":"The directed movement of substances into, out of or within a vacuole.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular transport","termid":"GO:0046907"}],"gene_count":82,"genes_by_uniquename":{"SJAG_00108":null,"SJAG_00181":null,"SJAG_00204":null,"SJAG_00208":null,"SJAG_00299":null,"SJAG_00301":null,"SJAG_00380":null,"SJAG_00416":null,"SJAG_00777":null,"SJAG_00821":null,"SJAG_00900":null,"SJAG_00916":null,"SJAG_01080":null,"SJAG_01088":null,"SJAG_01229":null,"SJAG_01242":null,"SJAG_01281":null,"SJAG_01324":null,"SJAG_01360":null,"SJAG_01367":null,"SJAG_01445":null,"SJAG_01488":null,"SJAG_01527":null,"SJAG_01586":null,"SJAG_01598":null,"SJAG_01645":null,"SJAG_01809":null,"SJAG_01876":null,"SJAG_01913":null,"SJAG_01981":null,"SJAG_02049":null,"SJAG_02117":null,"SJAG_02234":null,"SJAG_02240":null,"SJAG_02315":null,"SJAG_02349":null,"SJAG_02371":null,"SJAG_02453":null,"SJAG_02584":null,"SJAG_02587":null,"SJAG_02811":null,"SJAG_02912":null,"SJAG_03005":null,"SJAG_03072":null,"SJAG_03137":null,"SJAG_03250":null,"SJAG_03347":null,"SJAG_03385":null,"SJAG_03403":null,"SJAG_03442":null,"SJAG_03511":null,"SJAG_03726":null,"SJAG_03756":null,"SJAG_03783":null,"SJAG_03848":null,"SJAG_03860":null,"SJAG_03892":null,"SJAG_03962":null,"SJAG_03963":null,"SJAG_03970":null,"SJAG_03976":null,"SJAG_04023":null,"SJAG_04024":null,"SJAG_04047":null,"SJAG_04070":null,"SJAG_04349":null,"SJAG_04489":null,"SJAG_04552":null,"SJAG_04600":null,"SJAG_04643":null,"SJAG_04822":null,"SJAG_04902":null,"SJAG_04912":null,"SJAG_04931":null,"SJAG_04936":null,"SJAG_04966":null,"SJAG_05207":null,"SJAG_05210":null,"SJAG_05245":null,"SJAG_05303":null,"SJAG_07012":null,"SJAG_16459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"vacuolar transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0007034","terms_by_termid":{"GO:0006623":null,"GO:0006896":null,"GO:0007034":null,"GO:0032511":null,"GO:0043328":null,"GO:0044395":null,"GO:0045324":null,"GO:0120113":null}}


id: GO:0043456
data:
  {"annotated_genes":["SJAG_05314","SJAG_00685"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77882],"is_not":false,"summary":null,"term":"GO:0043456"},{"annotations":[91509],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905857"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the pentose-phosphate shunt, the process in which glucose is oxidized, coupled to NADPH synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amide metabolic process","termid":"GO:0034248"},{"relation_name":"is_a","term_name":"regulation of generation of precursor metabolites and energy","termid":"GO:0043467"},{"relation_name":"is_a","term_name":"regulation of carbohydrate catabolic process","termid":"GO:0043470"},{"relation_name":"is_a","term_name":"regulation of NADP metabolic process","termid":"GO:1902031"},{"relation_name":"regulates","term_name":"pentose-phosphate shunt","termid":"GO:0006098"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00685":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0006091","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"regulation of pentose-phosphate shunt","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of pentose phosphate pathway","type":"exact"},{"name":"regulation of pentose phosphate shunt","type":"exact"},{"name":"regulation of pentose-phosphate pathway","type":"exact"}],"termid":"GO:0043456","terms_by_termid":{"GO:0043456":null,"GO:1905857":null}}


id: GO:1901057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of trimethylenediamine.","definition_xrefs":["GOC:yaf","GOC:TermGenie","UniPathway:UPA00010"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine biosynthetic process","termid":"GO:0006596"},{"relation_name":"is_a","term_name":"trimethylenediamine metabolic process","termid":"GO:1901055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trimethylenediamine biosynthetic process","synonyms":[{"name":"trimethylenediamine anabolism","type":"exact"},{"name":"trimethylenediamine biosynthesis","type":"exact"},{"name":"trimethylenediamine formation","type":"exact"},{"name":"trimethylenediamine synthesis","type":"exact"}],"termid":"GO:1901057"}


id: GO:1900547
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A regulation of transcription from RNA polymerase II promoter that results in negative regulation of phenotypic switching.","definition_xrefs":["GOC:di","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of phenotypic switching by regulation of transcription from RNA polymerase II promoter (obsolete GO:1900547)","synonyms":[{"name":"negative regulation of phenotypic dimorphism by regulation of transcription from RNA polymerase II promoter","type":"related"}],"termid":"GO:1900547"}


id: MONDO:0008044
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any myoclonus-dystonia syndrome in which the cause of the disease is a mutation in the SGCE gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myoclonus-dystonia syndrome","termid":"MONDO:0000903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"myoclonic dystonia 11","secondary_identifiers":["OMIM:159900","UMLS:C1834570","GARD:18616","MEDGEN:331778","DOID:0090034"],"synonyms":[{"name":"DYT11","type":"related"},{"name":"SGCE myoclonus-dystonia syndrome","type":"exact"},{"name":"alcohol-responsive dystonia","type":"exact"},{"name":"dystonia 11, myoclonic","type":"related"},{"name":"dystonia, alcohol-responsive","type":"related"},{"name":"dystonia-11, myoclonic","type":"exact"},{"name":"myoclonic dystonia","type":"related"},{"name":"myoclonic dystonia 11","type":"exact"},{"name":"myoclonic dystonia type 11","type":"exact"},{"name":"myoclonus, hereditary essential","type":"related"},{"name":"myoclonus-dystonia syndrome","type":"related"},{"name":"myoclonus-dystonia syndrome caused by mutation in SGCE","type":"exact"}],"termid":"MONDO:0008044","xrefs":{"Monarch":{"xref_id":"0008044"}}}


id: PBO:0057872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3180-1","termid":"PBO:0057872"}


id: MONDO:0044675
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with decreased bone density (obsolete MONDO:0019704)","termid":"MONDO:0019704"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRP5-related primary osteoporosis","secondary_identifiers":["Orphanet:498481","MEDGEN:1798664","UMLS:C5567241","GARD:22031"],"termid":"MONDO:0044675","xrefs":{"Monarch":{"xref_id":"0044675"}}}


id: PBO:0087439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit F of the V1 peripheral membrane domain of V-ATPase; part of the electrogenic proton pump found throughout the endomembrane system; required for the V1 domain to assemble onto the vacuolar membrane; the V1 peripheral membrane domain of vacuolar H+-ATPase (V-ATPase) has eight subunits","termid":"PBO:0087439"}


id: PBO:0083593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a protein, based on available experimental and comparative sequence data; YAR069C has a paralog, YHR214C-D, that arose from a segmental duplication","termid":"PBO:0083593"}


id: GO:0061417
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a stimulus indicating the organism is under oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.","definition_xrefs":["PMID:9767597","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription from RNA polymerase II promoter in response to oxidative stress (obsolete GO:0061417)","termid":"GO:0061417"}


id: PBO:0004205
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.11.1.9","termid":"PBO:0004205"}


id: PBO:0065006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRDM10 divergent transcript","termid":"PBO:0065006"}


id: PBO:0054729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2138","termid":"PBO:0054729"}


id: PBO:0027408
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_protein_localization_to_cell_division_site","termid":"PBO:0027408"}


id: FYPO:0006987
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 in silent mating-type cassettes occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 dimethylation during vegetative growth","termid":"FYPO:0000873"},{"relation_name":"is_a","term_name":"abnormal histone methylation at silent mating-type cassette during vegetative growth","termid":"FYPO:0007373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0002274","FYPO:0002494","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased histone H3-K9 dimethylation at silent mating-type cassette during vegetative growth","synonyms":[{"name":"increased histone H3 K9 dimethylation at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 dimethylation at mating-type region heterochromatin during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 dimethylation at silent mating-type cassette during mitotic cell cycle","type":"related"},{"name":"increased histone H3K9 dimethylation at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"increased histone H3K9me2 at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 dimethylation at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"increased silent mating-type cassette histone H3-K9 dimethylation during vegetative growth","type":"exact"}],"termid":"FYPO:0006987"}


id: MOD:02012
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with a oleoyl group.","direct_ancestors":[{"relation_name":"is_a","term_name":"acylated residue","termid":"MOD:00649"},{"relation_name":"is_a","term_name":"lipoconjugated residue","termid":"MOD:01155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"oleoylated residue","termid":"MOD:02012"}


id: PBO:0044557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartyl-tRNA synthetase 2, mitochondrial","termid":"PBO:0044557"}


id: GO:0008755
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the polymerization of o-antigen chains. O-antigens are tetra- and pentasaccharide repeat units of the cell walls of Gram-negative bacteria and are a component of lipopolysaccharide.","definition_xrefs":["PMID:12045108","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"O antigen polymerase activity","synonyms":[{"name":"O-antigen polymerase activity","type":"exact"}],"termid":"GO:0008755"}


id: GO:0035793
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of metanephric mesenchymal cell migration resulting from the platelet-derived growth factor receptor-beta signaling pathway.","definition_xrefs":["PMID:10734101","GOC:yaf","GOC:bf","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metanephric mesenchymal cell migration by platelet-derived growth factor receptor-beta signaling pathway","termid":"GO:1900238"},{"relation_name":"is_a","term_name":"positive regulation of metanephric mesenchymal cell migration","termid":"GO:2000591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of metanephric mesenchymal cell migration by platelet-derived growth factor receptor-beta signaling pathway","synonyms":[{"name":"positive regulation of metanephric mesenchymal cell migration by PDGF receptor-beta signaling pathway","type":"exact"},{"name":"positive regulation of metanephric mesenchymal cell migration by PDGFR-beta signaling pathway","type":"exact"},{"name":"positive regulation of metanephric mesenchymal cell migration by betaPDGF receptor signaling pathway","type":"exact"},{"name":"positive regulation of metanephric mesenchymal cell migration by platelet-derived growth factor receptor-beta signalling pathway","type":"exact"}],"termid":"GO:0035793"}


id: PBO:0001104
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by ammonia","termid":"PBO:0001104"}


id: PBO:0043262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claudin 20","termid":"PBO:0043262"}


id: GO:1900553
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of asperfuranone.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide catabolic process","termid":"GO:0030640"},{"relation_name":"is_a","term_name":"diol catabolic process","termid":"GO:0034313"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"asperfuranone metabolic process","termid":"GO:1900552"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"asperfuranone catabolic process","synonyms":[{"name":"asperfuranone breakdown","type":"exact"},{"name":"asperfuranone catabolism","type":"exact"},{"name":"asperfuranone degradation","type":"exact"}],"termid":"GO:1900553"}


id: PBO:0063353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCOLCE antisense RNA 1","termid":"PBO:0063353"}


id: MONDO:0020041
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete 46,XY disorder of sex development due to a defect in testosterone metabolism by peripheral tissue (obsolete MONDO:0020041)","secondary_identifiers":["Orphanet:98086"],"termid":"MONDO:0020041","xrefs":{"Monarch":{"xref_id":"0020041"}}}


id: PBO:0066567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhomboid 5 homolog 2","termid":"PBO:0066567"}


id: GO:0071131
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphaV-beta3 integrin complex bound to laminin alpha-4.","definition_xrefs":["PMID:16824487"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"alphaV-beta3 integrin-laminin alpha-4 complex","synonyms":[{"name":"ITGAV-ITGB3-LAMA4 complex","type":"narrow"}],"termid":"GO:0071131"}


id: PBO:0116605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-coding adipose anti-inflammatory","termid":"PBO:0116605"}


id: GO:0072164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of a mesonephric tubule over time, from its initial formation to the mature structure. A mesonephric tubule is an epithelial tube that is part of the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube development","termid":"GO:0035295"},{"relation_name":"is_a","term_name":"mesonephric epithelium development","termid":"GO:0072163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric tubule development","termid":"GO:0072164"}


id: PBO:0091643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane fluoride export channel Fex2","termid":"PBO:0091643"}


id: PBO:0044989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAH-box helicase 40 pseudogene 1","termid":"PBO:0044989"}


id: MONDO:0011571
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dentinogenesis imperfecta type 2","termid":"MONDO:0007441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deafness, autosomal dominant 39, with dentinogenesis imperfecta 1","secondary_identifiers":["GARD:15383","MEDGEN:340145","MESH:C565316","OMIM:605594","UMLS:C1854146"],"synonyms":[{"name":"Dfna39/Dgi1 syndrome","type":"related"},{"name":"Dfna39/dentinogenesis imperfecta 1 syndrome","type":"related"},{"name":"Dgi1/Dfna39 syndrome","type":"related"},{"name":"deafness, autosomal dominant 39, with dentinogenesis","type":"narrow"},{"name":"deafness, autosomal dominant 39, with dentinogenesis imperfecta 1","type":"exact"},{"name":"deafness, autosomal dominant 39, with dentinogenesis imperfecta type 1","type":"exact"}],"termid":"MONDO:0011571","xrefs":{"Monarch":{"xref_id":"0011571"}}}


id: GO:0043811
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a fatty acyl-[acyl-carrier protein] + orthophosphate = acyl phosphate + [acyl-carrier protein].","definition_xrefs":["RHEA:42292"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"phosphate:acyl-[acyl carrier protein] acyltransferase activity","secondary_identifiers":["EC:2.3.1.274"],"termid":"GO:0043811"}


id: MOD:01955
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from RESID","definition_xrefs":["PubMed:21499260","RESID:AA0600"],"direct_ancestors":[{"relation_name":"is_a","term_name":"manganese containing modified residue","termid":"MOD:00740"},{"relation_name":"is_a","term_name":"calcium containing modified residue","termid":"MOD:01482"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-alanine residue","termid":"MOD:02065"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-aspartic acid residue","termid":"MOD:02066"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-glutamic acid residue","termid":"MOD:02068"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-histidine residue","termid":"MOD:02070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-alaninato bis-L-aspartato tris-L-glutamato L-histidino calcium tetramanganese pentoxide","synonyms":[{"name":"4Mn-Ca-5O cluster","type":"exact"},{"name":"L-alaninato bis-L-aspartato tris-L-glutamato L-histidino calcium tetramanganese pentoxide","type":"exact"},{"name":"mu2-alaninato-1kappaO(1),3kappaO(1')-mu2-aspartato-1kappaO(4),5kappaO(4')-mu2-aspartato-2kappaO(4),3kappaO(4')-mu2-glutamato-3kappaO(5),4kappaO(5')-mu2-glutamato-4kappaO(5),5kappaO(5')-mu-glutamato-2kappaO(5)-mu-histidino-2kappaN(tau)-mu4-oxido-1:2:4:5kappa(4)O-tri-mu3-oxido-1:2:3kappa(3)O;1:3:4kappa(3)O;2:3:4kappa(3)O;mu-oxido-4:5kappa(2)O-calciumtetramanganese","type":"exact"},{"name":"photosystem II catalytic cluster","type":"exact"}],"termid":"MOD:01955"}


id: MONDO:0014343
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Desbuquois dysplasia in which the cause of the disease is a mutation in the XYLT1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Desbuquois dysplasia","termid":"MONDO:0015426"},{"relation_name":"is_a","term_name":"linkeropathy","termid":"MONDO:1040022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Desbuquois dysplasia 2","secondary_identifiers":["OMIM:615777","UMLS:C4014294","MEDGEN:862731","GARD:16466"],"synonyms":[{"name":"Baratela-Scott syndrome","type":"exact"},{"name":"DBQD2","type":"related"},{"name":"Desbuquois dysplasia 2","type":"exact"},{"name":"Desbuquois dysplasia caused by mutation in XYLT1","type":"exact"},{"name":"Desbuquois dysplasia type 2","type":"exact"},{"name":"XYLT1 Desbuquois dysplasia","type":"exact"}],"termid":"MONDO:0014343","xrefs":{"Monarch":{"xref_id":"0014343"}}}


id: GO:0033076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving isoquinoline alkaloids, alkaloid compounds that contain bicyclic N-containing aromatic rings and are derived from a 3,4-dihydroxytyramine (dopamine) precursor that undergoes a Schiff base addition with aldehydes of different origin.","definition_xrefs":["PMID:26503307","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkaloid metabolic process","termid":"GO:0009820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"isoquinoline alkaloid metabolic process","synonyms":[{"name":"ipecac alkaloid metabolism","type":"related"},{"name":"isoquinoline alkaloid metabolism","type":"exact"}],"termid":"GO:0033076"}


id: PBO:0087608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the COMPASS (Set1C) complex; COMPASS methylates histone H3 on lysine 4 and is required in transcriptional silencing near telomeres","termid":"PBO:0087608"}


id: PBO:0042701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CELF2 antisense RNA 1","termid":"PBO:0042701"}


id: PBO:0073751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 2 member 6","termid":"PBO:0073751"}


id: PBO:0068037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 342","termid":"PBO:0068037"}


id: MONDO:0044793
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, acquired or congenital, usually single skin lesion. It can occur on any area of the body, but most commonly occurs on the face of children and the thighs of young females. It is characterized by a proliferation of large spindle, oval, or large epithelioid melanocytes in the dermal-epidermal junction. The melanocytic proliferation subsequently extends into the dermis.","definition_xrefs":["NCIT:C27007"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign melanocytic skin nevus","termid":"MONDO:0044794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"spitz nevus","secondary_identifiers":["ICDO:8770/0","UMLS:C0206739","MEDGEN:61671"],"synonyms":[{"name":"benign juvenile melanoma","type":"exact"},{"name":"juvenile nevus","type":"exact"},{"name":"spindle and/ or epithelioid cell Nevus","type":"exact"},{"name":"spitz naevus","type":"related"},{"name":"spitz nevi","type":"related"},{"name":"spitz nevus","type":"exact"}],"termid":"MONDO:0044793","xrefs":{"Monarch":{"xref_id":"0044793"}}}


id: PBO:0057316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 518c","termid":"PBO:0057316"}


id: GO:1904316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 2-O-acetyl-1-O-hexadecyl-sn-glycero-3-phosphocholine stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:9321918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to ether","termid":"GO:0045472"},{"relation_name":"is_a","term_name":"response to organophosphorus","termid":"GO:0046683"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to 2-O-acetyl-1-O-hexadecyl-sn-glycero-3-phosphocholine","synonyms":[{"name":"response to PAF","type":"exact"},{"name":"response to platelet-activating factor","type":"exact"}],"termid":"GO:1904316"}


id: MONDO:0017970
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete 46,XY disorder of sex development due to impaired androgen production (obsolete MONDO:0017970)","secondary_identifiers":["Orphanet:325357"],"synonyms":[{"name":"46,XY DSD due to impaired androgen production","type":"exact"}],"termid":"MONDO:0017970","xrefs":{"Monarch":{"xref_id":"0017970"}}}


id: PBO:0085696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in resistance to nitrosoguanidine and 6-azauracil; expression is regulated by transcription factors involved in multidrug resistance; SNG1 has a paralog, YJR015W, that arose from the whole genome duplication","termid":"PBO:0085696"}


id: FYPO:0001925
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the cellular response to gamma radiation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular response to stress during vegetative growth","termid":"FYPO:0000968"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal cellular response to gamma radiation","synonyms":[{"name":"normal cellular response to gamma radiation during mitotic cell cycle","type":"related"},{"name":"normal cellular response to gamma radiation during vegetative growth","type":"exact"},{"name":"normal sensitivity to gamma radiation","type":"exact"}],"termid":"FYPO:0001925"}


id: MONDO:0015926
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An occupational lung disorder caused by inhalation of dust particles. It is characterized by bilateral interstitial lung infiltrates. Representative examples include asbestosis, silicosis, anthracosis, and talc pneumoconiosis.","definition_xrefs":["NCIT:C26861"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interstitial lung disease","termid":"MONDO:0015925"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pneumoconiosis","secondary_identifiers":["icd11.foundation:611962875","ICD9:505","Orphanet:182098","MESH:D011009","SCTID:40122008","MEDGEN:19360","UMLS:C0032273","DOID:10316","MedDRA:10035653","GARD:20245"],"synonyms":[{"name":"Black lung disease","type":"related"},{"name":"coal worker's pneumoconiosis","type":"related"}],"termid":"MONDO:0015926","xrefs":{"Monarch":{"xref_id":"0015926"}}}


id: PBO:0027018
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_telomeric_repeat_sequence","termid":"PBO:0027018"}


id: MONDO:0000224
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acquired metabolic disease that is has its basis in the disruption of carbohydrate metabolism.","direct_ancestors":[{"relation_name":"is_a","term_name":"acquired metabolic disease","termid":"MONDO:0006504"},{"relation_name":"is_a","term_name":"carbohydrate metabolism disease","termid":"MONDO:0037792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"acquired carbohydrate metabolism disease","secondary_identifiers":["DOID:0050013"],"synonyms":[{"name":"carbohydrate metabolism disease","type":"related"}],"termid":"MONDO:0000224","xrefs":{"Monarch":{"xref_id":"0000224"}}}


id: SO:0000169
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA sequence in eukaryotic DNA to which RNA polymerase I binds, to begin transcription.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eukaryotic_promoter","termid":"SO:0002221"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNApol_I_promoter","synonyms":[{"name":"RNA polymerase A promoter","type":"exact"},{"name":"RNApol I promoter","type":"exact"},{"name":"pol I promoter","type":"exact"},{"name":"polymerase I promoter","type":"exact"}],"termid":"SO:0000169"}


id: PBO:0056103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LY6/PLAUR domain containing 8","termid":"PBO:0056103"}


id: PBO:0005334
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemolytic anemia","termid":"PBO:0005334"}


id: PBO:0001362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA kinase/phosphatase Pnk1","termid":"PBO:0001362"}


id: GO:0051949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of gamma-aminobutyric acid (GABA, 4-aminobutyrate) into a neuron or glial cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organic acid transport","termid":"GO:0032891"},{"relation_name":"is_a","term_name":"negative regulation of amino acid uptake involved in synaptic transmission","termid":"GO:0051942"},{"relation_name":"is_a","term_name":"regulation of gamma-aminobutyric acid uptake involved in transmission of nerve impulse","termid":"GO:0051947"},{"relation_name":"negatively_regulates","term_name":"gamma-aminobutyric acid reuptake","termid":"GO:0051936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of gamma-aminobutyric acid uptake involved in transmission of nerve impulse","synonyms":[{"name":"down regulation of gamma-aminobutyric acid uptake during transmission of nerve impulse","type":"exact"},{"name":"down-regulation of gamma-aminobutyric acid uptake during transmission of nerve impulse","type":"exact"},{"name":"downregulation of gamma-aminobutyric acid uptake during transmission of nerve impulse","type":"exact"},{"name":"inhibition of gamma-aminobutyric acid uptake during transmission of nerve impulse","type":"narrow"},{"name":"negative regulation of 4-aminobutyrate reuptake","type":"exact"},{"name":"negative regulation of 4-aminobutyrate uptake during transmission of nerve impulse","type":"exact"},{"name":"negative regulation of GABA reuptake","type":"exact"},{"name":"negative regulation of GABA uptake during transmission of nerve impulse","type":"exact"},{"name":"negative regulation of gamma-aminobutyric acid reuptake","type":"exact"},{"name":"negative regulation of gamma-aminobutyric acid uptake during transmission of nerve impulse","type":"related"},{"name":"negative regulation of gamma-aminobutyric acid uptake involved in conduction of nerve impulse","type":"exact"}],"termid":"GO:0051949"}


id: GO:0060522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Signaling at short range from mesenchymal cells to cells of an epithelium that results in a developmental change in the epithelial cells.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inductive cell-cell signaling","termid":"GO:0031129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inductive mesenchymal to epithelial cell signaling","synonyms":[{"name":"inductive mesenchymal to epithelial cell signalling","type":"exact"}],"termid":"GO:0060522"}


id: PBO:0016586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transthyretin/hydroxyisourate hydrolase (predicted)","termid":"PBO:0016586"}


id: GO:0034827
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1,2-dihydroxy-5,6,7,8-tetrahydronaphthalene + O2 = 4-(2-oxocyclohexyl)-2-hydroxy-buta-2,4-dienoate + H+.","definition_xrefs":["UM-BBD_reactionID:r1171"],"gene_count":0,"genotype_count":0,"name":"obsolete 1,2-dihydroxy-5,6,7,8-tetrahydronaphthalene extradiol dioxygenase activity (obsolete GO:0034827)","termid":"GO:0034827"}


id: GO:0044435
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a plastid, a member of a family of organelles found in the cytoplasm of plants and some protists, which are membrane-bounded and contain DNA. Plant plastids develop from a common type, the proplastid.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete plastid part (obsolete GO:0044435)","termid":"GO:0044435"}


id: MONDO:0850088
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial primary hypomagnesemia","termid":"MONDO:0018100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005240"],"is_obsolete":false,"name":"EGF-related primary hypomagnesemia with intellectual disability","secondary_identifiers":["UMLS:C5681825","GARD:22485","MEDGEN:1843381","Orphanet:620368"],"termid":"MONDO:0850088","xrefs":{"Monarch":{"xref_id":"0850088"}}}


id: GO:0097688
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The neurotransmitter-gated ion channel clustering process in which glutamate receptors are localized to distinct domains in the cell membrane.","definition_xrefs":["PMID:19723286","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter-gated ion channel clustering","termid":"GO:0072578"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"glutamate receptor clustering","synonyms":[{"name":"glutamatergic receptor clustering","type":"exact"}],"termid":"GO:0097688"}


id: PBO:0001183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically upregulated gene Mug99","termid":"PBO:0001183"}


